Citrus Sinensis ID: 021539

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
Protein Sequence
MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTSA
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHcccEEEEEEcccccccccccccHHHHccccccccccEEEEcEEccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccEEEEEccccccccccccEEEEEEcHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccEcccHHHHHHHHHHHcccccEccccccHHHHHHHHHHHHHHccHHHcHccccccccccccEEEcccccccccccccccccccccccccHHHHHHccccHHHHHHHccccccccccccccHHHHHHHHHHHHHcccHHcEEEEEEccHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHcccEEEEEEcccccccccHHHHHHHHccccccccccEEEEEcccccccccHHHHHHHHccccEEEEEHHHccccccccccccccccEEEEEEHHHccccccccEEEEEEHHHHHHHHcccc
Coil and Loop (DISEMBL)
miikkahtliPAHIVAEAISTLRGlglrwsgpitptemQYVEQYVFakypqyyngivepedthdlenlcvdeestetgidekrksspkssspsfnfndldksqlepsrLLDILSKktsfkgnfisipEIQARNRALkhcglsedeyLVLFVPNYKEAMLMIGesypffkgnyYLTIISEESDYIKGFAAqkeskviaapeTWLDLRIKGSQLSQNFRRkckytpkglfsypvvvngtrysMHWISEAHRNAWHVLLDATGLVFGEDQLALalhrpdlvlctldnnthaqplkITCLLVrrksfdttsstsa
Flexible Loop (DISEMBL)
miikkahtlipaHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEEStetgidekrksspkssspsfnfndldksqlePSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLrikgsqlsqnfrrkckytpkglfsypVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNthaqplkitcllvrrksfdttsstsa
Low Complexity Region (SEG)
MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEKRksspkssspsfnfnDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTSA
Disordered region (IsUnstruct)
****KAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLC****************************************LDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRR***********
Disordered Region (DISOPRED)
*****AHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEK*************************RLLD****************EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLS*******KYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT******
Disordered Region (DISEMBL)
MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDE*********************FNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK**********
Disordered Region (DISPRO)
MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEE********************FNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	311	2.2.26 [Sep-21-2011]
Q9N0E7	882	Molybdenum cofactor sulfu	yes	no	0.459	0.162	0.270	3e-06
Q14CH1	862	Molybdenum cofactor sulfu	yes	no	0.469	0.169	0.240	0.0002
Q96EN8	888	Molybdenum cofactor sulfu	yes	no	0.469	0.164	0.246	0.0003
A8X493	707	Molybdenum cofactor sulfu	N/A	no	0.662	0.291	0.270	0.0005

>sp|Q9N0E7|MOCOS_BOVIN Molybdenum cofactor sulfurase OS=Bos taurus GN=MOCOS PE=2 SV=2

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 27/170 (15%)

Query: 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF------KGNYYLTIISEESDY 183
           Q R R L H   S ++Y V+F      A+ ++ E++P+        G+ +  +    +  
Sbjct: 96  QVRFRILAHFHTSPEDYTVIFTSGSTAALKLVAEAFPWVSPGPEGSGSCFCYLTDSHTSV 155

Query: 184 I---KGFAAQKESKVIAAPE-TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GT 237
           +   K  AA   S +   PE  W        +            P  LF YP   N  GT
Sbjct: 156 VGMRKITAAMNVSSIPVRPEDMW-----SAERQDAAAAGDPAGQPPHLFCYPAQSNFSGT 210

Query: 238 RYSMHWISE---------AHRNAWHVLLDATGLVFGEDQLALALHRPDLV 278
           RY + WI E         +    W VLLDA   V G   L L++H+ D V
Sbjct: 211 RYPLSWIGEVKSGRRRPASRPGKWFVLLDAAAFV-GTSPLDLSVHQADFV 259

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 9

>sp|Q14CH1|MOCOS_MOUSE Molybdenum cofactor sulfurase OS=Mus musculus GN=Mocos PE=2 SV=1

 Score = 46.6 bits (109), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 20/166 (12%)

Query: 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF------KGNYYLTIISEESDY 183
           Q R R L H   + ++Y+V+F      A+ ++ E++P+        G+++  +    +  
Sbjct: 96  QVRYRILTHFHTTPEDYIVIFTAGSTAALRLVAEAFPWVSRSPENSGSHFCYLTDNHTSV 155

Query: 184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GTRYSM 241
           +          V + P    D+     + +      C+     LF YP   N  GTRY +
Sbjct: 156 VGMRKVAAAMSVTSIPVKPEDMWSAEGKDAGACDPDCQL--PHLFCYPAQSNFSGTRYPL 213

Query: 242 HWISEAHR------NA---WHVLLDATGLVFGEDQLALALHRPDLV 278
            W+ E         NA   W VLLDA   V     L L+ H+ D +
Sbjct: 214 SWVEEVKSGRRSPVNAPGKWFVLLDAASYV-STSPLDLSAHQADFI 258

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 9

>sp|Q96EN8|MOCOS_HUMAN Molybdenum cofactor sulfurase OS=Homo sapiens GN=MOCOS PE=1 SV=2

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF------KGNYYLTIISEESDY 183
           Q R R L H   + ++Y V+F      A+ ++ E++P+        G+ +  +    +  
Sbjct: 96  QVRYRILAHFHTTAEDYTVIFTAGSTAALKLVAEAFPWVSQGPESSGSRFCYLTDSHTSV 155

Query: 184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GTRYSM 241
           +          VI+ P    DL     + +      C+     LF YP   N  G RY +
Sbjct: 156 VGMRNVTMAINVISTPVRPEDLWSAEERSASASNPDCQL--PHLFCYPAQSNFSGVRYPL 213

Query: 242 HWISEAHR---------NAWHVLLDATGLVFGEDQLALALHRPDLV 278
            WI E              W VLLDA   V     L L+ H+ D V
Sbjct: 214 SWIEEVKSGRLHPVSTPGKWFVLLDAASYV-STSPLDLSAHQADFV 258

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. In vitro, the C-terminal domain is able to reduces N-hydroxylated prodrugs, such as benzamidoxime.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 9

>sp|A8X493|MOCOS_CAEBR Molybdenum cofactor sulfurase OS=Caenorhabditis briggsae GN=CBG07703 PE=3 SV=3

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 16/222 (7%)

Query: 101 KSQLEPSRLLD---ILSKKTSFKGNFISIPEI--QARNRALKHCGLSEDEYLVLFVPNYK 155
           K+QLE    L    IL+   S     I   +I   AR+R L++   + D+Y V+F  N  
Sbjct: 14  KTQLEELAKLQTQLILANPHSHHSTAIKTQQIVSSARHRILRYFNTTADDYFVVFTNNTT 73

Query: 156 EAMLMIGESYPFFKGNYYLTIISEESDYIKG----FAAQKES--KVIAAPETWLDLRIKG 209
            A+ ++ E++ F        ++SE S  +KG    FA   +S   V+      L      
Sbjct: 74  HALKIVAENFNFGHRTQE-GVVSEISAVLKGGPSNFAYFNDSHHSVVGLRHVVLGKVDAI 132

Query: 210 SQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHW-ISEAHRNAWHVLLDATGLVFGEDQL 268
           S ++++  ++ +  PK   S  V    + + + + I+E   + W V +DA  LV G  +L
Sbjct: 133 SCVNEDVVKE-ECIPKVENSLFVFTAMSNFLIPFQINEKLISGWSVCVDAAALVSGT-RL 190

Query: 269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTS 310
            L  HRP+ V  +        P  I  LLV++ S  +   TS
Sbjct: 191 DLTAHRPNFVAFSF-YKIFGYPTGIGALLVKKDSSKSIEKTS 231

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
225456335	361	PREDICTED: uncharacterized protein LOC10	0.993	0.855	0.733	1e-137
255547706	381	hypothetical protein RCOM_1079930 [Ricin	0.983	0.803	0.758	1e-135
224072584	327	predicted protein [Populus trichocarpa]	0.977	0.929	0.730	1e-131
255540225	359	hypothetical protein RCOM_1506010 [Ricin	0.983	0.852	0.700	1e-128
297738459	339	unnamed protein product [Vitis vinifera]	0.938	0.861	0.713	1e-127
359473610	341	PREDICTED: uncharacterized protein LOC10	0.964	0.879	0.721	1e-124
449454824	341	PREDICTED: uncharacterized protein LOC10	0.983	0.897	0.662	1e-118
357465051	369	Molybdenum cofactor sulfurase [Medicago	0.971	0.818	0.619	1e-112
356508809	362	PREDICTED: uncharacterized protein LOC10	0.983	0.845	0.629	1e-111
356513675	358	PREDICTED: uncharacterized protein LOC10	0.980	0.851	0.614	1e-110

>gi|225456335|ref|XP_002280125.1| PREDICTED: uncharacterized protein LOC100249081 [Vitis vinifera] gi|297734426|emb|CBI15673.3| unnamed protein product [Vitis vinifera]

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/315 (73%), Positives = 274/315 (86%), Gaps = 6/315 (1%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M++KKAHT+IPAHIVAEAISTL GL LRWSGPITPTEMQYVEQYVFAKYPQY NG+VE  
Sbjct: 44  MVVKKAHTVIPAHIVAEAISTLHGLDLRWSGPITPTEMQYVEQYVFAKYPQYANGLVEEG 103

Query: 61  DTHDLENLCVDEESTETGIDEKRKS---SPKSSSPSF--NFNDLDKSQLEPSRLLDILSK 115
           +  DL  LC++EES++   D++RKS   S + S+PSF  N  DLD++QLE SRLLDIL+K
Sbjct: 104 EMIDLSTLCINEESSDPTPDDRRKSPRGSFRESTPSFGSNLPDLDRTQLEASRLLDILTK 163

Query: 116 KTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT 175
           K+SF G+FISIPEIQA+N+ LKHCGLS++EYLVLF  NYKEAM+M+GESYPFF+GN+Y+T
Sbjct: 164 KSSFPGSFISIPEIQAQNKVLKHCGLSDNEYLVLFTSNYKEAMMMVGESYPFFRGNFYMT 223

Query: 176 IISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN 235
           I+ EE DYIK FA+ K+SKVI+APETWLDLRIKGSQLSQ FRRKCK++PKGLF YP  VN
Sbjct: 224 ILGEEEDYIKEFASYKDSKVISAPETWLDLRIKGSQLSQYFRRKCKHSPKGLFCYPADVN 283

Query: 236 GTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITC 295
           GTRYSMHW+SEAHRN+WHVLLDAT LV GED+L LALHRPD VLC+LD NTHA P +ITC
Sbjct: 284 GTRYSMHWVSEAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCSLD-NTHAHPSRITC 342

Query: 296 LLVRRKSFDTTSSTS 310
           LLVRRKSFDT+++++
Sbjct: 343 LLVRRKSFDTSTASA 357

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547706|ref|XP_002514910.1| hypothetical protein RCOM_1079930 [Ricinus communis] gi|223545961|gb|EEF47464.1| hypothetical protein RCOM_1079930 [Ricinus communis]

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/315 (75%), Positives = 270/315 (85%), Gaps = 9/315 (2%)

Query: 5   KAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHD 64
           KAHT+IPAH++AEAIST+RGL LRWSGPITPTEM+YV QYVFAKYPQY +GIVE  DT D
Sbjct: 68  KAHTVIPAHLIAEAISTIRGLDLRWSGPITPTEMEYVRQYVFAKYPQYSHGIVEEGDTTD 127

Query: 65  L-ENLCVDEESTETGIDEKRKSSPKS-----SSPSF--NFNDLDKSQLEPSRLLDILSKK 116
           L  NL  +EES+E   DEKR  SPK+      SPSF  + +DLDK+QLE SRLLDILSKK
Sbjct: 128 LIANLNGNEESSEVTQDEKRNISPKNLGSKDYSPSFTRSLSDLDKTQLEASRLLDILSKK 187

Query: 117 TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI 176
           TSF+GNFISIPEIQA+NRALK CGLSE +YLV+F+PNYK+AM+MIGESYPFFKGNYY+TI
Sbjct: 188 TSFQGNFISIPEIQAQNRALKQCGLSEHDYLVIFMPNYKDAMVMIGESYPFFKGNYYMTI 247

Query: 177 ISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNG 236
           + EE D I+ FA  KESKVI  PE+WLDLRIKGSQLSQ FRRKCKY PKGLFSYPV VN 
Sbjct: 248 LGEEVDTIREFATHKESKVIPMPESWLDLRIKGSQLSQYFRRKCKYIPKGLFSYPVTVNE 307

Query: 237 TRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCL 296
           TRYS+HWISEAHRN+WHVLLDATGLVFGED+LALALHRPD VLCTL+ NTH QP KITCL
Sbjct: 308 TRYSLHWISEAHRNSWHVLLDATGLVFGEDRLALALHRPDFVLCTLE-NTHPQPSKITCL 366

Query: 297 LVRRKSFDTTSSTSA 311
           LVR++SFD TS++ A
Sbjct: 367 LVRKRSFDNTSASLA 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072584|ref|XP_002303793.1| predicted protein [Populus trichocarpa] gi|222841225|gb|EEE78772.1| predicted protein [Populus trichocarpa]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/312 (73%), Positives = 266/312 (85%), Gaps = 8/312 (2%)

Query: 4   KKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPED-T 62
           KKAHT+IPAH++AEAIST+RGL LRWSGPIT +EMQYV QYV AKYPQY NGIV   D T
Sbjct: 15  KKAHTIIPAHLIAEAISTIRGLDLRWSGPITLSEMQYVRQYVLAKYPQYCNGIVADGDST 74

Query: 63  HDLENLCVDEESTETGIDEKR----KSSPKSSSPSF--NFNDLDKSQLEPSRLLDILSKK 116
            +L NLC+DEES+++  D KR        + S+P F  + +DLDK+QLE SRL+DIL+KK
Sbjct: 75  FNLTNLCIDEESSKSTPDSKRGLPQSFGARESTPKFTRSLSDLDKTQLEASRLVDILNKK 134

Query: 117 TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI 176
           TSF+GNFISIPEIQ +NRALKHCGLSE +YLV+F+PNY++AM++IGESYPFF+GNYY+TI
Sbjct: 135 TSFQGNFISIPEIQVQNRALKHCGLSEADYLVIFMPNYRDAMVIIGESYPFFRGNYYMTI 194

Query: 177 ISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNG 236
           I EE+D I+ FA  KESKVI  PETWLDLRIKGSQLSQ FRRKCK+ PKGLFSYP +VN 
Sbjct: 195 IEEENDMIREFATSKESKVIPMPETWLDLRIKGSQLSQYFRRKCKHIPKGLFSYPAIVNE 254

Query: 237 TRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCL 296
           TRYSMHWISEAHRN+WHVLLDATGLV GE++LALALHRPD VLCTLD NTHAQP KITCL
Sbjct: 255 TRYSMHWISEAHRNSWHVLLDATGLVSGEERLALALHRPDFVLCTLD-NTHAQPSKITCL 313

Query: 297 LVRRKSFDTTSS 308
           LVR+ SFDT++S
Sbjct: 314 LVRKLSFDTSAS 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540225|ref|XP_002511177.1| hypothetical protein RCOM_1506010 [Ricinus communis] gi|223550292|gb|EEF51779.1| hypothetical protein RCOM_1506010 [Ricinus communis]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/317 (70%), Positives = 267/317 (84%), Gaps = 11/317 (3%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M++KKAHT+IPAHI+AEAIST+RGL LRWSGPITPTE QYVEQYV AKYPQY  G+V  E
Sbjct: 44  MVVKKAHTVIPAHIIAEAISTIRGLDLRWSGPITPTERQYVEQYVLAKYPQY-AGLVVGE 102

Query: 61  DTHDLENLCVDEESTETGIDEKRKSSPK-----SSSPSF--NFNDLDKSQLEPSRLLDIL 113
              DL  LC++EE++E   D+KRKS P+     +SSPS   +  DLD++QLEPSRLLDIL
Sbjct: 103 KL-DLSTLCINEEASEATPDDKRKS-PRNTYREASSPSLGSHLPDLDRTQLEPSRLLDIL 160

Query: 114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYY 173
           +KK+SF G+F+SIPEIQA+NR LKHCGL  DEYLVLF PNYK+AM+++GESYPFF+GN+Y
Sbjct: 161 TKKSSFPGSFVSIPEIQAQNRVLKHCGLPADEYLVLFTPNYKDAMMLVGESYPFFRGNFY 220

Query: 174 LTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV 233
           ++II+E+ DYI+ FA  KESKVI APETWLDLRIKGSQLSQ FRRKCK++PKGLFSYP  
Sbjct: 221 MSIIAEKLDYIREFATYKESKVILAPETWLDLRIKGSQLSQYFRRKCKHSPKGLFSYPAD 280

Query: 234 VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKI 293
           VNGTRYSMHW+SEAHRN+WHVLLDAT LV G D+++LALHRPD VLC+ D N  A P  I
Sbjct: 281 VNGTRYSMHWVSEAHRNSWHVLLDATALVVGTDRMSLALHRPDFVLCSPD-NIPANPSNI 339

Query: 294 TCLLVRRKSFDTTSSTS 310
           TCLLVR+KSFDT++++S
Sbjct: 340 TCLLVRKKSFDTSTASS 356

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738459|emb|CBI27660.3| unnamed protein product [Vitis vinifera]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/318 (71%), Positives = 258/318 (81%), Gaps = 26/318 (8%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M+IKKA ++IPAH+VAEAISTL GL LRWSGPITP+EMQYVE+YV AKYPQY NG+    
Sbjct: 40  MVIKKAKSVIPAHLVAEAISTLHGLDLRWSGPITPSEMQYVEEYVLAKYPQYCNGL---- 95

Query: 61  DTHDLENLCVDEESTETGIDEKRKSSPKS------SSPSF--NFNDLDKSQLEPSRLLDI 112
                       ES+E+  DEK KS PKS      SSPSF  N +DLDK+QLEPSRLL+I
Sbjct: 96  ------------ESSESMADEKHKS-PKSIGIRESSSPSFSINLSDLDKTQLEPSRLLEI 142

Query: 113 LSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY 172
           L+KK+SF GNFISIPEIQARNRAL+HCGLSE EY+VLF PNYK+AM+MIGESYPFF+GN+
Sbjct: 143 LTKKSSFSGNFISIPEIQARNRALQHCGLSESEYMVLFTPNYKDAMMMIGESYPFFRGNF 202

Query: 173 YLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV 232
           Y+TII EE DYI+ F   K+SKV++APETWLDLRIKGSQLSQ FRRKCK  PKGLFSYP 
Sbjct: 203 YMTIIGEERDYIRQFVMAKDSKVVSAPETWLDLRIKGSQLSQYFRRKCKNIPKGLFSYPA 262

Query: 233 VVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLK 292
            VNGTRYSMHWISEAHRN+WHVLLDAT +V G+D+L LALHRPD VLCTLD+  H QP  
Sbjct: 263 NVNGTRYSMHWISEAHRNSWHVLLDATEMVIGKDRLTLALHRPDFVLCTLDDK-HTQPSM 321

Query: 293 ITCLLVRRKSFDTTSSTS 310
           ITCLLVR KSFDTT+  S
Sbjct: 322 ITCLLVRTKSFDTTTPLS 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473610|ref|XP_002271377.2| PREDICTED: uncharacterized protein LOC100243822 [Vitis vinifera]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/312 (72%), Positives = 257/312 (82%), Gaps = 12/312 (3%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M+IKKA ++IPAH+VAEAISTL GL LRWSGPITP+EMQYVE+YV AKYPQY NG+VE E
Sbjct: 40  MVIKKAKSVIPAHLVAEAISTLHGLDLRWSGPITPSEMQYVEEYVLAKYPQYCNGLVEKE 99

Query: 61  DTHD--LENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTS 118
           D     L NL ++EES+E            S S S N +DLDK+QLEPSRLL+IL+KK+S
Sbjct: 100 DDKKIGLHNLSINEESSEKS---------SSPSFSINLSDLDKTQLEPSRLLEILTKKSS 150

Query: 119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS 178
           F GNFISIPEIQARNRAL+HCGLSE EY+VLF PNYK+AM+MIGESYPFF+GN+Y+TII 
Sbjct: 151 FSGNFISIPEIQARNRALQHCGLSESEYMVLFTPNYKDAMMMIGESYPFFRGNFYMTIIG 210

Query: 179 EESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTR 238
           EE DYI+ F   K+SKV++APETWLDLRIKGSQLSQ FRRKCK  PKGLFSYP  VNGTR
Sbjct: 211 EERDYIRQFVMAKDSKVVSAPETWLDLRIKGSQLSQYFRRKCKNIPKGLFSYPANVNGTR 270

Query: 239 YSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLV 298
           YSMHWISEAHRN+WHVLLDAT +V G+D+L LALHRPD VLCTLD+  H QP  ITCLLV
Sbjct: 271 YSMHWISEAHRNSWHVLLDATEMVIGKDRLTLALHRPDFVLCTLDDK-HTQPSMITCLLV 329

Query: 299 RRKSFDTTSSTS 310
           R KSFDTT+  S
Sbjct: 330 RTKSFDTTTPLS 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454824|ref|XP_004145154.1| PREDICTED: uncharacterized protein LOC101203333 [Cucumis sativus] gi|449474261|ref|XP_004154121.1| PREDICTED: uncharacterized protein LOC101219770 [Cucumis sativus] gi|449503676|ref|XP_004162121.1| PREDICTED: uncharacterized protein LOC101224251 [Cucumis sativus]

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/317 (66%), Positives = 256/317 (80%), Gaps = 11/317 (3%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M +KKA T+IP HI+AEAISTL GL LRWSGPITP E QYVEQYV AKYPQY    ++ E
Sbjct: 25  MGVKKALTMIPPHIIAEAISTLTGLDLRWSGPITPAERQYVEQYVLAKYPQYAG--LDGE 82

Query: 61  DTHDLENLCVDEESTETGIDEKRKSSPK-----SSSPSF--NFNDLDKSQLEPSRLLDIL 113
              DL  LC+DEE T+  + +  + SP+     SS+PSF  N  +L+ +QLEPSRLLDIL
Sbjct: 83  KI-DLSCLCIDEEPTDQIMADDWRKSPRNIPRESSTPSFGSNLPNLEGTQLEPSRLLDIL 141

Query: 114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYY 173
           +KK+SF G+FISIPEIQA+N+ LKHCGL ++EYLVLF P+Y++AM+++GE+YPFF+GNYY
Sbjct: 142 NKKSSFPGSFISIPEIQAQNKVLKHCGLPDEEYLVLFTPSYRQAMMLVGEAYPFFRGNYY 201

Query: 174 LTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV 233
           +T+I EE D IK FA+ KESKVI APETWLDLRIKGSQLSQ FRRKCK++PKGLFSYP  
Sbjct: 202 MTVIREEHDCIKEFASFKESKVIEAPETWLDLRIKGSQLSQYFRRKCKHSPKGLFSYPAD 261

Query: 234 VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKI 293
           VNGTRYS+HW+SEAHRN+WHVLLDAT  V G ++L   LHRPD VLC+LD NTHA P +I
Sbjct: 262 VNGTRYSLHWVSEAHRNSWHVLLDATAFVVGGERLNPLLHRPDFVLCSLD-NTHANPSRI 320

Query: 294 TCLLVRRKSFDTTSSTS 310
            CLL+R+KSFDTT ++S
Sbjct: 321 ICLLIRKKSFDTTMASS 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465051|ref|XP_003602807.1| Molybdenum cofactor sulfurase [Medicago truncatula] gi|355491855|gb|AES73058.1| Molybdenum cofactor sulfurase [Medicago truncatula]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/326 (61%), Positives = 251/326 (76%), Gaps = 24/326 (7%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M++KK H +IPAHI+AEAIST+R   +RWSGPITP EM+YVEQYV AKYP+Y   I    
Sbjct: 48  MVLKKGHAMIPAHIIAEAISTIREFDIRWSGPITPKEMEYVEQYVLAKYPEYSRLIEGDG 107

Query: 61  DTHDLENLCVDEESTETGIDEKRKS-----SPKSSSPSFNF------NDLDKSQLEPSRL 109
           +  D+    ++EE     +DEK KS     SP+ SS S+ F      +D  K QLE SRL
Sbjct: 108 NGIDMSTFIINEEP----LDEKGKSPRGTPSPRDSS-SYTFGSSLPESDRAKIQLEQSRL 162

Query: 110 LDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK 169
           LDIL+KK+SF G+FISIPEIQA+N+ LKH GL++DEYLVLF P+YK+AM+++GESYPF K
Sbjct: 163 LDILNKKSSFTGSFISIPEIQAQNKVLKHYGLTDDEYLVLFTPSYKDAMMLVGESYPFIK 222

Query: 170 GNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFS 229
           GNYY+TI+ +E D+IK FA  KESKVI AP+TWLDLRIKGSQLSQNFRR+CK +PKGLFS
Sbjct: 223 GNYYMTILDQEEDFIKEFACFKESKVIPAPKTWLDLRIKGSQLSQNFRRRCKISPKGLFS 282

Query: 230 YPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTH-- 287
           YP   +GT   MHWISEAHRN WHVLLDA+  V G+D+L LALHRPD V+C+LDNNTH  
Sbjct: 283 YPADASGT---MHWISEAHRNNWHVLLDASAYVVGKDRLHLALHRPDFVICSLDNNTHSS 339

Query: 288 ---AQPLKITCLLVRRKSFDTTSSTS 310
              + P +ITCLLVR++SFDT++++S
Sbjct: 340 NTNSNPSRITCLLVRKESFDTSAASS 365

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508809|ref|XP_003523146.1| PREDICTED: uncharacterized protein LOC100782782 [Glycine max]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/316 (62%), Positives = 251/316 (79%), Gaps = 10/316 (3%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           M+IKK HTLIPAHI+AEAIST+  L +RWSGPITP EM+YVEQYV AKYP+Y   +    
Sbjct: 47  MVIKKRHTLIPAHIIAEAISTIADLDIRWSGPITPKEMEYVEQYVLAKYPEYSGLMKGDG 106

Query: 61  DTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDL-----DKSQLEPSRLLDILSK 115
           +  +L +  + EE +E+ ID++ KS  +SS+  F  N+L      K QLEPSRLLDIL+K
Sbjct: 107 NGINLSSFIIYEEPSESMIDDRGKSPRESSTYFFGSNNLPEMDRAKIQLEPSRLLDILNK 166

Query: 116 KTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT 175
           K+SF G+FISIPEIQARN+ L H GL ++EYLVLF P+YK+AM+++GESYPF KGNYY+T
Sbjct: 167 KSSFLGSFISIPEIQARNKILNHYGLPDEEYLVLFTPSYKDAMMLVGESYPFVKGNYYMT 226

Query: 176 IISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN 235
           I+ +E DYI+ FA+ KESKVI+AP+TWLDLRI GSQLSQNFRR+CK + KGLFSYPV  N
Sbjct: 227 ILDQEEDYIREFASFKESKVISAPKTWLDLRISGSQLSQNFRRRCKISSKGLFSYPVDAN 286

Query: 236 GTRYSMHWISEAHRNAWHVLLDATGLVFGEDQL-ALALHRPDLVLCTLDNNTHAQPLKIT 294
           GT   MHWISEAHRN WHVLLDA+ LV G+D+L  LALHRPD V+C L+ NTH+ P ++T
Sbjct: 287 GT---MHWISEAHRNNWHVLLDASALVVGKDRLHLLALHRPDFVICNLE-NTHSNPSRVT 342

Query: 295 CLLVRRKSFDTTSSTS 310
           CLLVR+KSF+ ++++S
Sbjct: 343 CLLVRKKSFEVSATSS 358

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513675|ref|XP_003525536.1| PREDICTED: uncharacterized protein LOC100793062 [Glycine max]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/314 (61%), Positives = 248/314 (78%), Gaps = 9/314 (2%)

Query: 1   MIIKKAHTLIPAHIVAEAISTLRGLGLRWSGPITPTEMQYVEQYVFAKYPQYYNGIVEPE 60
           ++IKK H +IP HI+AEAIST+R + +RWSGPIT  EM+YVEQYV AKYP+Y   I    
Sbjct: 46  LVIKKPHVVIPPHIIAEAISTIRDIDIRWSGPITQKEMEYVEQYVLAKYPEYAGLIEGDG 105

Query: 61  DTHDLENLCVDEESTETGIDEKRKSSPKSS--SPSF--NFNDLDKSQLEPSRLLDILSKK 116
           +  D+ +  ++EE +E  + + RK SP+ +   P F  N  ++DK+QLEPSRLLDIL+KK
Sbjct: 106 NGIDMSSFIINEEPSEP-LSDDRKKSPRGTFREPLFGSNLPEMDKTQLEPSRLLDILNKK 164

Query: 117 TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI 176
           +SF G+FISIPEIQA+N+ LKHCGL +DEYLVLF P+YK+AM+++GESYPF KGNYY+TI
Sbjct: 165 SSFPGSFISIPEIQAQNKVLKHCGLPDDEYLVLFTPSYKDAMMLVGESYPFVKGNYYMTI 224

Query: 177 ISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNG 236
           + EE DYI+ FA+ KESKVI AP+TWLDLRI+GSQLSQNFRRKCK + KGLF+Y   VNG
Sbjct: 225 LGEEKDYIREFASFKESKVILAPKTWLDLRIRGSQLSQNFRRKCKVSLKGLFAYEADVNG 284

Query: 237 TRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCL 296
           T    HW+SEAHRN WHVLLDA+ LV G+D+L L LHRPD ++C L ++TH+ P +ITCL
Sbjct: 285 TN---HWVSEAHRNYWHVLLDASALVLGKDRLHLGLHRPDFLVCCL-HSTHSNPSRITCL 340

Query: 297 LVRRKSFDTTSSTS 310
           LVR KSF T++++S
Sbjct: 341 LVRTKSFGTSTASS 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	311
TAIR|locus:2166523	570	AT5G51920 [Arabidopsis thalian	0.588	0.321	0.286	6.5e-18
TAIR|locus:2046837	895	AT2G23520 [Arabidopsis thalian	0.678	0.235	0.286	1.9e-17
TAIR|locus:2115179	896	AT4G37100 [Arabidopsis thalian	0.636	0.220	0.294	3.1e-17
TAIR|locus:2158088	870	AT5G66950 [Arabidopsis thalian	0.569	0.203	0.311	3.8e-17
TAIR|locus:2127253	559	AT4G22980 "AT4G22980" [Arabido	0.646	0.359	0.280	3.4e-13
UNIPROTKB|F1N3A9	849	MOCOS "Molybdenum cofactor sul	0.459	0.168	0.288	0.00014
UNIPROTKB|G3N1I0	882	MOCOS "Molybdenum cofactor sul	0.459	0.162	0.288	0.00015
UNIPROTKB|Q9N0E7	882	MOCOS "Molybdenum cofactor sul	0.459	0.162	0.288	0.00015
UNIPROTKB|A8X493	707	CBG07703 "Molybdenum cofactor	0.659	0.289	0.273	0.00019

TAIR|locus:2166523 AT5G51920 [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 6.5e-18, P = 6.5e-18
 Identities = 55/192 (28%), Positives = 96/192 (50%)

Query:   128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF 187
             E   + R +    +SE++Y ++F  N   A  ++ ESYPF      LT+   ES+ +   
Sbjct:   168 EYSMKRRIMGFLKISEEDYSMVFTANRTSAFRLVAESYPFNSKRKLLTVYDYESEAVSEI 227

Query:   188 --AAQKE-SKVIAAPETWLDLRIKGSQLSQNF---RRKCKYTPKGLFSYPVV--VNGTRY 239
                ++K  +KV AA  +W  L++  S+L +     +   K   KG++ +P+   V G+RY
Sbjct:   228 NRVSEKRGAKVAAAEFSWPRLKLCSSKLRKLVTAGKNGSKTKKKGIYVFPLHSRVTGSRY 287

Query:   240 SMHWISEAHRNAWHVLLDATGLVFGE-DQLALALHRPDLVLCTLDNNTHAQPLKITCLLV 298
                W+S A  N WHV++DA GL   + D   L+++ PD ++C+        P    CL V
Sbjct:   288 PYLWMSVAQENGWHVMIDACGLGPKDMDSFGLSIYNPDFMVCSFYKVFGENPSGFGCLFV 347

Query:   299 RRKSFDTTSSTS 310
             ++ +     S++
Sbjct:   348 KKSTISILESST 359

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2046837 AT2G23520 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.9e-17, P = 1.9e-17
 Identities = 63/220 (28%), Positives = 99/220 (45%)

Query:   100 DKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAML 159
             D      S +   LS    + G  I   E   + R + +  + E EY ++F  +   A  
Sbjct:   169 DSCTFSLSEITANLSNHALYGGAEIGTVEHDLKTRIMDYLNIPESEYGLVFTGSRGSAFR 228

Query:   160 MIGESYPFFKGNYYLTIISEESDYIKGFAA---QKESKVIAAPETWLDLRIKGSQLSQNF 216
             ++ ESYPF      LT+   ES  +   A    +K +K   A   W  L++  + L +  
Sbjct:   229 LLAESYPFHTNKRLLTMFDHESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRL 288

Query:   217 ---RRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGE-DQLAL 270
                +RK K +  GLF +P    V G++YS  W++ A +N WHVLLDA  L   + D L L
Sbjct:   289 SHKKRKKKDSAVGLFVFPAQSRVTGSKYSYQWMALAQQNNWHVLLDAGSLGPKDMDSLGL 348

Query:   271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTS 310
             +L RP+ ++ +        P    CLL+++       S S
Sbjct:   349 SLFRPEFIITSFYKVFGHDPTGFGCLLIKKSVMGNLQSQS 388

GO:0003824 "catalytic activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2115179 AT4G37100 [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 61/207 (29%), Positives = 97/207 (46%)

Query:   113 LSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY 172
             LS    + G      E   + R + +  + E+EY ++F  +   A  ++ ESYPF     
Sbjct:   186 LSNHALYGGAESGTVEHDIKTRIMDYLNIPENEYGLVFTVSRGSAFRLLAESYPFQSNKR 245

Query:   173 YLTIISEESDYIKGFAA---QKESKVIAAPETWLDLRIKGSQLSQNF---RRKCKYTPKG 226
              LT+   ES  +   A    +K +K   A   W  L++  + L +     +RK K +  G
Sbjct:   246 LLTMFDHESQSVNWMAQTAREKGAKAYNAWFKWPTLKLCSTDLKKRLSYKKRKKKDSAVG 305

Query:   227 LFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGE-DQLALALHRPDLVLCTLD 283
             LF +P    V GT+YS  W++ A +N WHVLLDA  L   + D L L+L RP+ ++ +  
Sbjct:   306 LFVFPAQSRVTGTKYSYQWMALAQQNHWHVLLDAGSLGPKDMDSLGLSLFRPEFIITSFY 365

Query:   284 NNTHAQPLKITCLLVRRKSFDTTSSTS 310
                   P    CLL+++    +  S S
Sbjct:   366 RVFGHDPTGFGCLLIKKSVMGSLQSQS 392

GO:0003824 "catalytic activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2158088 AT5G66950 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 58/186 (31%), Positives = 92/186 (49%)

Query:   134 RALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF---AAQ 190
             R + +  + E+EY ++F  +   A  ++ ESYPF      LT+   ES  +      A +
Sbjct:   201 RIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDHESQSVSWMGQCAKE 260

Query:   191 KESKVIAAPETWLDLRIKGSQLSQNF---RRKCKYTPKGLFSYPVV--VNGTRYSMHWIS 245
             K +KV +A   W  LR+    L +     +++ K +  GLF +PV   V G++YS  W++
Sbjct:   261 KGAKVGSAWFKWPTLRLCSMDLKKEILSKKKRKKDSATGLFVFPVQSRVTGSKYSYQWMA 320

Query:   246 EAHRNAWHVLLDATGLVFGE-DQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD 304
              A +N WHVLLDA  L   + D L L+L RPD ++ +        P    CLL+++    
Sbjct:   321 LAQQNNWHVLLDAGALGPKDMDSLGLSLFRPDFIITSFYRVFGYDPTGFGCLLIKKSVIS 380

Query:   305 TTSSTS 310
                S S
Sbjct:   381 CLQSQS 386

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2127253 AT4G22980 "AT4G22980" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 60/214 (28%), Positives = 96/214 (44%)

Query:   101 KSQLEPSRLLDILSKKTSFKGNFISIPE---IQAR--NRALKHCGLSEDEYLVLFVPNYK 155
             +S L  S LL +  K+ S     +S  E    Q+R   R      L E EY ++   +  
Sbjct:   118 ESDLNHS-LLTLSCKQVSSGKELLSFEEESRFQSRIRKRITSFMNLEESEYHMILTQDRS 176

Query:   156 EAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVI---AAPETWLDLRIKGSQL 212
              A  ++ E Y F      LT+ + E + ++      E K I   +A  +W    I   +L
Sbjct:   177 SAFKIVAELYSFKTNPNLLTVYNYEDEAVEEMIRISEKKGIKPQSAEFSWPSTEILSEKL 236

Query:   213 SQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISEAHRNAWHVLLDATGLVFGE-DQLA 269
              +   R  +   +GLF +P+  +V G  YS  W+S A  + WHVLLD + L   + + L 
Sbjct:   237 KRRITRSKRRGKRGLFVFPLQSLVTGASYSYSWMSLARESEWHVLLDTSALGSKDMETLG 296

Query:   270 LALHRPDLVLCTLDNNT-HAQPLKITCLLVRRKS 302
             L+L +PD ++C+         P    CL V++ S
Sbjct:   297 LSLFQPDFLICSFTEVLGQDDPSGFGCLFVKKSS 330

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0052542 "defense response by callose deposition" evidence=RCA

UNIPROTKB|F1N3A9 MOCOS "Molybdenum cofactor sulfurase" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
 Identities = 49/170 (28%), Positives = 70/170 (41%)

Query:   130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK------GNYYLTIISEESDY 183
             Q R R L H   S ++Y V+F      A+ ++ E++P+        G+ +  +    +  
Sbjct:    63 QVRFRILAHFHTSPEDYTVIFTSGSTAALKLVAEAFPWVSPGPEGSGSCFCYLTDSHTSV 122

Query:   184 I---KGFAAQKESKVIAAPET-WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GT 237
             +   K  AA   S +   PE  W   R   +       +     P  LF YP   N  GT
Sbjct:   123 VGMRKITAAMNVSSIPVRPEDMWSAERQDAAAAGDPAGQ-----PPHLFCYPAQSNFSGT 177

Query:   238 RYSMHWISEA----HRNA-----WHVLLDATGLVFGEDQLALALHRPDLV 278
             RY + WI E      R A     W VLLDA   V G   L L++H+ D V
Sbjct:   178 RYPLSWIGEVKSGRRRPASRPGKWFVLLDAAAFV-GTSPLDLSVHQADFV 226

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0030151 "molybdenum ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

UNIPROTKB|G3N1I0 MOCOS "Molybdenum cofactor sulfurase" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 49/170 (28%), Positives = 70/170 (41%)

Query:   130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK------GNYYLTIISEESDY 183
             Q R R L H   S ++Y V+F      A+ ++ E++P+        G+ +  +    +  
Sbjct:    96 QVRFRILAHFHTSPEDYTVIFTSGSTAALKLVAEAFPWVSPGPEGSGSCFCYLTDSHTSV 155

Query:   184 I---KGFAAQKESKVIAAPET-WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GT 237
             +   K  AA   S +   PE  W   R   +       +     P  LF YP   N  GT
Sbjct:   156 VGMRKITAAMNVSSIPVRPEDMWSAERQDAAAAGDPAGQ-----PPHLFCYPAQSNFSGT 210

Query:   238 RYSMHWISEA----HRNA-----WHVLLDATGLVFGEDQLALALHRPDLV 278
             RY + WI E      R A     W VLLDA   V G   L L++H+ D V
Sbjct:   211 RYPLSWIGEVKSGRRRPASRPGKWFVLLDAAAFV-GTSPLDLSVHQADFV 259

GO:0043545 "molybdopterin cofactor metabolic process" evidence=IEA

GO:0008265 "Mo-molybdopterin cofactor sulfurase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0030151 "molybdenum ion binding" evidence=IEA

UNIPROTKB|Q9N0E7 MOCOS "Molybdenum cofactor sulfurase" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 49/170 (28%), Positives = 70/170 (41%)

Query:   130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK------GNYYLTIISEESDY 183
             Q R R L H   S ++Y V+F      A+ ++ E++P+        G+ +  +    +  
Sbjct:    96 QVRFRILAHFHTSPEDYTVIFTSGSTAALKLVAEAFPWVSPGPEGSGSCFCYLTDSHTSV 155

Query:   184 I---KGFAAQKESKVIAAPET-WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GT 237
             +   K  AA   S +   PE  W   R   +       +     P  LF YP   N  GT
Sbjct:   156 VGMRKITAAMNVSSIPVRPEDMWSAERQDAAAAGDPAGQ-----PPHLFCYPAQSNFSGT 210

Query:   238 RYSMHWISEA----HRNA-----WHVLLDATGLVFGEDQLALALHRPDLV 278
             RY + WI E      R A     W VLLDA   V G   L L++H+ D V
Sbjct:   211 RYPLSWIGEVKSGRRRPASRPGKWFVLLDAAAFV-GTSPLDLSVHQADFV 259

GO:0005575 "cellular_component" evidence=ND

GO:0043545 "molybdopterin cofactor metabolic process" evidence=IMP

GO:0008265 "Mo-molybdopterin cofactor sulfurase activity" evidence=IMP

GO:0016740 "transferase activity" evidence=IEA

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0030151 "molybdenum ion binding" evidence=IEA

UNIPROTKB|A8X493 CBG07703 "Molybdenum cofactor sulfurase" [Caenorhabditis briggsae (taxid:6238)]

 Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
 Identities = 61/223 (27%), Positives = 99/223 (44%)

Query:   101 KSQLEPSRLLD---ILSKKTSFKGNFISIPEI--QARNRALKHCGLSEDEYLVLFVPNYK 155
             K+QLE    L    IL+   S     I   +I   AR+R L++   + D+Y V+F  N  
Sbjct:    14 KTQLEELAKLQTQLILANPHSHHSTAIKTQQIVSSARHRILRYFNTTADDYFVVFTNNTT 73

Query:   156 EAMLMIGESYPFFKGNYYLTIISEESDYIKG----FAAQKES--KVIAAPETWLDLRIKG 209
              A+ ++ E++ F        ++SE S  +KG    FA   +S   V+      L      
Sbjct:    74 HALKIVAENFNFGHRTQE-GVVSEISAVLKGGPSNFAYFNDSHHSVVGLRHVVLGKVDAI 132

Query:   210 SQLSQNF-RRKCKYTPKGLFSYPVVVNGTRYSMHW-ISEAHRNAWHVLLDATGLVFGEDQ 267
             S ++++  + +C   PK   S  V    + + + + I+E   + W V +DA  LV G  +
Sbjct:   133 SCVNEDVVKEEC--IPKVENSLFVFTAMSNFLIPFQINEKLISGWSVCVDAAALVSGT-R 189

Query:   268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTS 310
             L L  HRP+ V  +        P  I  LLV++ S  +   TS
Sbjct:   190 LDLTAHRPNFVAFSF-YKIFGYPTGIGALLVKKDSSKSIEKTS 231


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      311       297   0.00093  115 3  11 22  0.39    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  226 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.28u 0.13s 22.41t   Elapsed:  00:00:01
  Total cpu time:  22.28u 0.13s 22.41t   Elapsed:  00:00:01
  Start:  Fri May 10 00:16:39 2013   End:  Fri May 10 00:16:40 2013

GO:0008265 "Mo-molybdopterin cofactor sulfurase activity" evidence=ISS

GO:0043545 "molybdopterin cofactor metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	311
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	100.0
PLN02724	805	Molybdenum cofactor sulfurase	100.0
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.97
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.97
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.96
PLN02651	364	cysteine desulfurase	99.96
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.96
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.95
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.95
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.94
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.94
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.94
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.94
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.93
PRK03080	378	phosphoserine aminotransferase; Provisional	99.93
PRK02769	380	histidine decarboxylase; Provisional	99.93
PRK02948	381	cysteine desulfurase; Provisional	99.93
PLN02409	401	serine--glyoxylate aminotransaminase	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK14012	404	cysteine desulfurase; Provisional	99.93
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.92
PLN03032	374	serine decarboxylase; Provisional	99.92
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.92
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.91
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.9
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.9
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.9
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.89
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.89
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.88
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.87
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.86
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.84
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.83
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.83
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.81
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.8
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.8
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.79
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.78
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.77
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.76
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.76
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.75
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.74
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.74
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.69
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.68
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.67
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.66
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.64
PLN02452	365	phosphoserine transaminase	99.64
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.64
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.64
PRK08114	395	cystathionine beta-lyase; Provisional	99.64
PLN02271	586	serine hydroxymethyltransferase	99.64
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.63
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.63
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.62
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.62
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.61
PRK04311	464	selenocysteine synthase; Provisional	99.6
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.59
PLN02880	490	tyrosine decarboxylase	99.58
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.58
PRK05367	954	glycine dehydrogenase; Provisional	99.58
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.56
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.56
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.55
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.55
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.54
PRK08064	390	cystathionine beta-lyase; Provisional	99.54
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.54
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.53
PLN02263	470	serine decarboxylase	99.51
PLN02721	353	threonine aldolase	99.51
PRK05367	954	glycine dehydrogenase; Provisional	99.51
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.51
PRK08861	388	cystathionine gamma-synthase; Provisional	99.51
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.51
PRK07179	407	hypothetical protein; Provisional	99.5
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.5
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.49
PRK09028	394	cystathionine beta-lyase; Provisional	99.49
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.48
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.47
PRK12566	954	glycine dehydrogenase; Provisional	99.46
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.46
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.46
PRK05939	397	hypothetical protein; Provisional	99.45
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.45
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.44
PRK07503	403	methionine gamma-lyase; Provisional	99.44
PRK08249	398	cystathionine gamma-synthase; Provisional	99.43
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.43
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.43
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.42
PRK08045	386	cystathionine gamma-synthase; Provisional	99.42
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.42
PRK07811	388	cystathionine gamma-synthase; Provisional	99.42
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.42
PRK06225	380	aspartate aminotransferase; Provisional	99.42
PRK08776	405	cystathionine gamma-synthase; Provisional	99.42
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.41
PRK08574	385	cystathionine gamma-synthase; Provisional	99.41
PRK07050	394	cystathionine beta-lyase; Provisional	99.41
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.41
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.4
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.4
PLN02590	539	probable tyrosine decarboxylase	99.4
PRK06767	386	methionine gamma-lyase; Provisional	99.39
PRK05968	389	hypothetical protein; Provisional	99.39
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.39
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.38
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.38
PRK07582	366	cystathionine gamma-lyase; Validated	99.37
PRK12462	364	phosphoserine aminotransferase; Provisional	99.37
PRK06460	376	hypothetical protein; Provisional	99.36
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.36
PLN02509	464	cystathionine beta-lyase	99.34
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.33
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.33
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.32
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.32
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.31
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.31
PRK07671	377	cystathionine beta-lyase; Provisional	99.29
PRK06234	400	methionine gamma-lyase; Provisional	99.29
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.29
PRK07908	349	hypothetical protein; Provisional	99.28
PRK05957	389	aspartate aminotransferase; Provisional	99.27
PRK08960	387	hypothetical protein; Provisional	99.26
PRK08361	391	aspartate aminotransferase; Provisional	99.26
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.24
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.24
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.24
PRK06108	382	aspartate aminotransferase; Provisional	99.23
PLN02242	418	methionine gamma-lyase	99.23
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.23
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.23
PRK06836	394	aspartate aminotransferase; Provisional	99.23
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.22
PLN02483	489	serine palmitoyltransferase	99.21
PRK09105	370	putative aminotransferase; Provisional	99.21
PRK05967	395	cystathionine beta-lyase; Provisional	99.2
PRK05764	393	aspartate aminotransferase; Provisional	99.18
PRK08912	387	hypothetical protein; Provisional	99.18
PRK06434	384	cystathionine gamma-lyase; Validated	99.17
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.16
PRK03321	352	putative aminotransferase; Provisional	99.16
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.15
PRK07324	373	transaminase; Validated	99.15
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.14
PRK09265	404	aminotransferase AlaT; Validated	99.13
PRK07337	388	aminotransferase; Validated	99.13
PRK07681	399	aspartate aminotransferase; Provisional	99.13
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.13
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.13
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.13
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.12
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.11
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.11
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.1
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.1
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.09
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.09
PRK05942	394	aspartate aminotransferase; Provisional	99.08
PRK07568	397	aspartate aminotransferase; Provisional	99.08
PRK07550	386	hypothetical protein; Provisional	99.07
PRK07683	387	aminotransferase A; Validated	99.06
PRK08363	398	alanine aminotransferase; Validated	99.06
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.05
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.05
PRK12414	384	putative aminotransferase; Provisional	99.03
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.02
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.01
PRK07777	387	aminotransferase; Validated	99.01
PRK07682	378	hypothetical protein; Validated	99.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.0
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	98.98
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	98.97
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	98.96
PRK09082	386	methionine aminotransferase; Validated	98.96
PRK06207	405	aspartate aminotransferase; Provisional	98.95
KOG2142	728	consensus Molybdenum cofactor sulfurase [Coenzyme	98.95
PLN02822	481	serine palmitoyltransferase	98.94
PRK13237	460	tyrosine phenol-lyase; Provisional	98.93
PLN00175	413	aminotransferase family protein; Provisional	98.91
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	98.91
PRK10534	333	L-threonine aldolase; Provisional	98.9
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	98.9
PRK09064	407	5-aminolevulinate synthase; Validated	98.9
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	98.9
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	98.89
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	98.89
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	98.87
PRK13392	410	5-aminolevulinate synthase; Provisional	98.87
PLN02187	462	rooty/superroot1	98.87
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	98.86
PLN02656	409	tyrosine transaminase	98.86
PRK13393	406	5-aminolevulinate synthase; Provisional	98.86
PTZ00433	412	tyrosine aminotransferase; Provisional	98.85
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	98.83
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	98.77
PRK06348	384	aspartate aminotransferase; Provisional	98.77
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	98.77
PRK06358	354	threonine-phosphate decarboxylase; Provisional	98.77
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	98.75
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	98.75
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.73
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.72
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	98.72
PRK07049	427	methionine gamma-lyase; Validated	98.71
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	98.7
PRK09148	405	aminotransferase; Validated	98.7
PRK06107	402	aspartate aminotransferase; Provisional	98.7
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	98.69
PRK15029	755	arginine decarboxylase; Provisional	98.68
PRK08175	395	aminotransferase; Validated	98.68
PRK01533	366	histidinol-phosphate aminotransferase; Validated	98.68
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	98.67
PRK06290	410	aspartate aminotransferase; Provisional	98.67
KOG2142	728	consensus Molybdenum cofactor sulfurase [Coenzyme	98.67
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	98.63
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	98.62
PRK08068	389	transaminase; Reviewed	98.6
PTZ00377	481	alanine aminotransferase; Provisional	98.57
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	98.57
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	98.54
PTZ00125	400	ornithine aminotransferase-like protein; Provision	98.54
PRK07366	388	succinyldiaminopimelate transaminase; Validated	98.53
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	98.53
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	98.5
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.49
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.49
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	98.48
PRK08636	403	aspartate aminotransferase; Provisional	98.48
PRK03244	398	argD acetylornithine aminotransferase; Provisional	98.46
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	98.46
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	98.41
PRK06855	433	aminotransferase; Validated	98.4
PRK07392	360	threonine-phosphate decarboxylase; Validated	98.4
PRK07505	402	hypothetical protein; Provisional	98.38
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	98.38
PRK13578	720	ornithine decarboxylase; Provisional	98.36
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	98.34
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.34
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	98.3
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	98.3
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	98.27
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	98.26
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	98.23
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	98.23
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	98.21
PLN02368	407	alanine transaminase	98.21
KOG1368	384	consensus Threonine aldolase [Amino acid transport	98.21
PRK09257	396	aromatic amino acid aminotransferase; Provisional	98.2
PRK05839	374	hypothetical protein; Provisional	98.18
PRK08354	311	putative aminotransferase; Provisional	98.15
PLN02231	534	alanine transaminase	98.14
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	98.14
PRK02627	396	acetylornithine aminotransferase; Provisional	98.12
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	98.11
PRK01278	389	argD acetylornithine transaminase protein; Provisi	98.09
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	98.07
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	98.05
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	98.02
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.02
PRK06425	332	histidinol-phosphate aminotransferase; Validated	98.01
PRK15400	714	lysine decarboxylase CadA; Provisional	98.01
PRK15399	713	lysine decarboxylase LdcC; Provisional	98.0
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	97.96
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	97.95
PLN02955	476	8-amino-7-oxononanoate synthase	97.93
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	97.9
PRK08637	388	hypothetical protein; Provisional	97.89
PLN02624	474	ornithine-delta-aminotransferase	97.85
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	97.84
PRK03715	395	argD acetylornithine transaminase protein; Provisi	97.83
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	97.82
PRK04260	375	acetylornithine aminotransferase; Provisional	97.74
PRK09275	527	aspartate aminotransferase; Provisional	97.71
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	97.65
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	97.64
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	97.62
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	97.61
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	97.61
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	97.6
PTZ00376	404	aspartate aminotransferase; Provisional	97.59
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	97.58
KOG0629	510	consensus Glutamate decarboxylase and related prot	97.56
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	97.53
PLN02672	1082	methionine S-methyltransferase	97.52
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	97.51
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	97.5
PRK02936	377	argD acetylornithine aminotransferase; Provisional	97.42
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	97.27
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	97.22
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	97.2
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	97.18
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	97.15
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	97.09
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.0
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	96.99
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	96.96
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	96.95
COG4100	416	Cystathionine beta-lyase family protein involved i	96.92
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	96.77
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	96.75
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	96.74
PRK06062	451	hypothetical protein; Provisional	96.71
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	96.61
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	96.61
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	96.55
PLN02760	504	4-aminobutyrate:pyruvate transaminase	96.51
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	96.5
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	96.49
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	96.3
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	96.18
PRK06105	460	aminotransferase; Provisional	96.07
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	96.03
PRK07678	451	aminotransferase; Validated	95.91
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	95.89
PRK12403	460	putative aminotransferase; Provisional	95.89
PRK12566	954	glycine dehydrogenase; Provisional	95.82
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	95.8
PRK07482	461	hypothetical protein; Provisional	95.8
PRK06541	460	hypothetical protein; Provisional	95.78
PRK09792	421	4-aminobutyrate transaminase; Provisional	95.62
PLN02397	423	aspartate transaminase	95.62
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	95.6
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	95.59
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	95.54
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	95.54
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	95.52
PRK07480	456	putative aminotransferase; Validated	95.52
PRK05965	459	hypothetical protein; Provisional	95.39
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	95.25
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	95.24
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	95.22
PLN00144	382	acetylornithine transaminase	95.11
PRK07046	453	aminotransferase; Validated	95.02
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	94.98
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	94.85
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	94.84
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	94.83
PRK07483	443	hypothetical protein; Provisional	94.61
PRK07481	449	hypothetical protein; Provisional	94.55
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	94.51
PRK07036	466	hypothetical protein; Provisional	94.47
KOG0634	472	consensus Aromatic amino acid aminotransferase and	94.39
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	94.38
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	94.23
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	94.2
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	94.0
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	93.77
PRK06917	447	hypothetical protein; Provisional	93.29
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	93.24
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	93.09
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	93.06
PRK04612	408	argD acetylornithine transaminase protein; Provisi	92.78
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	92.7
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	92.62
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	92.44
PRK06149	972	hypothetical protein; Provisional	92.4
PRK08088	425	4-aminobutyrate aminotransferase; Validated	92.1
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	91.28
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	91.1
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	90.37
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	90.15
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	89.94
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	89.64
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	88.81
PRK06148	1013	hypothetical protein; Provisional	88.37
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	87.86
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	87.4
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	87.38
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	83.53
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	81.77

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-40  Score=319.97  Aligned_cols=182  Identities=20%  Similarity=0.203  Sum_probs=160.0

Q ss_pred             HHHHhcCCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc--CCCC---CCCEEE-EccCcC
Q 021539          109 LLDILSKKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES--YPFF---KGNYYL-TIISEE  180 (311)
Q Consensus       109 l~~~l~~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s--~~~~---~Gd~Il-s~~eh~  180 (311)
                      +.+.+.|++|.+  |++++..+|+||++||+++|+++++  |+||||+||++|+++.+  +.+.   +|++|+ |..||+
T Consensus        25 ~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~e--IiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~  102 (386)
T COG1104          25 LTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEE--IIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHP  102 (386)
T ss_pred             HHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCe--EEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccH
Confidence            344455665554  9999999999999999999998854  99999999999999988  4332   467764 888988


Q ss_pred             --hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEE
Q 021539          181 --SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVL  255 (311)
Q Consensus       181 --~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vl  255 (311)
                        .+.++.+ ++.|++|+++|++. +|.|++++|+++|+++     |.||+++++  ++|++|||++|++ |+++|++||
T Consensus       103 aVl~~~~~L-e~~g~~Vtyl~V~~-~G~v~~e~L~~al~~~-----T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fH  175 (386)
T COG1104         103 AVLNTCRYL-ERQGFEVTYLPVDS-NGLVDLEQLEEALRPD-----TILVSIMHANNETGTIQPIAEIGEICKERGILFH  175 (386)
T ss_pred             HHHHHHHHH-HhcCCeEEEeCCCC-CCeEcHHHHHHhcCCC-----ceEEEEEecccCeeecccHHHHHHHHHHcCCeEE
Confidence              4667777 67799999999997 8999999999999986     689999976  8999999999977 699999999


Q ss_pred             ecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          256 LDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       256 vDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +||+|++ |++|+|+..+++|+++||+|| ++| |+|+|+||+|++.
T Consensus       176 vDAvQa~-Gkipi~~~~~~vD~ls~SaHK-~~G-pkGiGaLyv~~~~  219 (386)
T COG1104         176 VDAVQAV-GKIPIDLEELGVDLLSFSAHK-FGG-PKGIGALYVRPGV  219 (386)
T ss_pred             Eehhhhc-CceeccccccCcceEEeehhh-ccC-CCceEEEEECCCC
Confidence            9999999 999999999999999999999 988 9999999997754

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.9e-40  Score=322.43  Aligned_cols=180  Identities=19%  Similarity=0.178  Sum_probs=162.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChHH--HHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--FFKGNYYL-TIISEESDY--IKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~V  195 (311)
                      +..+...++++|+.+|+|+|+++ ..+|+||+|+|+|+|+++.++.  +.+||+|+ |..|||+|.  |++++++.|++|
T Consensus        61 ~~~~t~~~e~aRe~va~~~~a~~-~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v  139 (405)
T COG0520          61 AEEATDLYEAAREAVARFLNADS-SDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV  139 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEE
Confidence            56677788999999999999986 2359999999999999999997  78899975 889999764  678888889999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      +++|++ ++|.++.+++++.++++     |+||+++++  .+|+++|+++|.+ ||++|++|+|||+|++ |+.|+|+++
T Consensus       140 ~~i~~~-~~g~~~~~~~~~~i~~~-----Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~-~h~~idv~~  212 (405)
T COG0520         140 RVIPLD-DDGLLDLDALEKLITPK-----TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAA-GHLPIDVQE  212 (405)
T ss_pred             EEEecC-CCCCcCHHHHHHhcCCC-----ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECcccc-CccCCCchh
Confidence            999998 58999999999988875     689999988  5999999999976 7999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      +++||++||+|||++| |.|+|+||+|+++.+...|.
T Consensus       213 l~~Df~afsgHKwl~g-P~GiGvLy~r~~~l~~l~P~  248 (405)
T COG0520         213 LGCDFLAFSGHKWLLG-PTGIGVLYVRKELLEELEPF  248 (405)
T ss_pred             cCCCEEEEcccccccC-CCceEEEEEchHHHhhcCCc
Confidence            9999999999998888 99999999999999886664

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=100.00  E-value=6.2e-37  Score=299.33  Aligned_cols=177  Identities=20%  Similarity=0.189  Sum_probs=156.8

Q ss_pred             hcCCCCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC----EEEEc-cCcC--hHHH
Q 021539          113 LSKKTSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN----YYLTI-ISEE--SDYI  184 (311)
Q Consensus       113 l~~~ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd----~Ils~-~eh~--~~~~  184 (311)
                      +.|+.+. .|+++...+|+||+.||+++||++.+  |+||+|||||+|++++++.|..++    +|++. .||.  ...+
T Consensus        71 ~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d--IiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~  148 (428)
T KOG1549|consen   71 LGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD--IVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC  148 (428)
T ss_pred             hcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc--EEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH
Confidence            4567777 79999999999999999999999876  999999999999999999997776    77654 4555  3455


Q ss_pred             HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccccc
Q 021539          185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQs  261 (311)
                      +.+ ++.|++|+++|++ .++.++.+.|+++++++     |+||+++++  ++|++||+++|.. |++.|++||+||||+
T Consensus       149 ~~l-~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~~-----T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQa  221 (428)
T KOG1549|consen  149 RAL-QEEGLEVTYLPVE-DSGLVDISKLREAIRSK-----TRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQA  221 (428)
T ss_pred             HHH-HhcCeEEEEeccC-ccccccHHHHHHhcCCC-----ceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhh
Confidence            554 4568999999998 58899999999999986     689999987  6999999999975 799999999999999


Q ss_pred             CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          262 VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       262 v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      + |++++||+++++||+++|+|| ||| |+|+|+||+|++
T Consensus       222 v-G~i~vDV~eln~D~~s~s~HK-~yg-p~~iGaLYvr~~  258 (428)
T KOG1549|consen  222 V-GKIPVDVQELNADFLSISAHK-IYG-PPGIGALYVRRK  258 (428)
T ss_pred             c-CCccccHHHcCchheeeeccc-ccC-CCcceEEEEccC
Confidence            9 999999999999999999999 999 889999999983

>PLN02724 Molybdenum cofactor sulfurase

Probab=100.00  E-value=3.8e-35  Score=310.46  Aligned_cols=239  Identities=18%  Similarity=0.245  Sum_probs=180.3

Q ss_pred             HHHHHHhhccCccCCcccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcc
Q 021539           41 VEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFK  120 (311)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~  120 (311)
                      ++.++..+||.+.+-+|.|++++++.    ..+..+... +....+.++|+|+..         .              .
T Consensus        21 ~~~~R~~~fp~l~~~iYLD~Aatt~~----~~~~V~~~~-~~~~~~~~~np~s~~---------~--------------~   72 (805)
T PLN02724         21 IDELRATEFARLKGVVYLDHAGATLY----SESQLEAAL-ADFSSNVYGNPHSQS---------D--------------S   72 (805)
T ss_pred             HHHHHHHHhhhcCCCEeEeCCCCCCC----CHHHHHHHH-HHHHhhccCCCCcCc---------c--------------h
Confidence            88888889999998899999988721    111121111 122345677777533         0              2


Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH-HHHHHHHhCCcEEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD-YIKGFAAQKESKVIAA  198 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~-~~~~la~~~G~~V~~v  198 (311)
                      +..+...++++|++||+|||+++++|+||||+|+|+|+|+++++++|++|++|++. .||++. .++.+++++|++|+++
T Consensus        73 s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v  152 (805)
T PLN02724         73 SMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV  152 (805)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec
Confidence            34456678999999999999987777899999999999999999999999998754 555532 4566778889999999


Q ss_pred             eCCC-------CCcccCH--HHHHhhhhc----c-CCCCCceEEEEecc--cccchhcHHHHHHHHHC---------CcE
Q 021539          199 PETW-------LDLRIKG--SQLSQNFRR----K-CKYTPKGLFSYPVV--VNGTRYSMHWISEAHRN---------AWH  253 (311)
Q Consensus       199 p~~~-------~~g~id~--~~L~~~l~~----~-~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~---------g~~  253 (311)
                      |++.       ..+.++.  ++|++.++.    . ....+++||+++|+  ++|.++|+++|.++++.         +++
T Consensus       153 ~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~  232 (805)
T PLN02724        153 DIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWM  232 (805)
T ss_pred             cchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceE
Confidence            8762       1334433  556655321    0 00123579999988  69999999998776542         478


Q ss_pred             EEecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          254 VLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       254 vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      |+|||+|++ |+.|+||+++++||++||+|| |||+|.|+|+||+|+++.+...|+
T Consensus       233 v~vDaaQ~~-g~~piDv~~~~~Dfl~~S~HK-~~GgP~G~G~L~vr~~~~~~l~p~  286 (805)
T PLN02724        233 VLLDAAKGC-GTSPPDLSRYPADFVVVSFYK-IFGYPTGLGALLVRRDAAKLLKKK  286 (805)
T ss_pred             EEeehhhhc-CCCCCChhhcCCCEEEEecce-eccCCCCceEEEEehhhhhhhcCC
Confidence            999999999 999999999999999999999 888899999999999887665553

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.97  E-value=1.1e-30  Score=251.24  Aligned_cols=178  Identities=21%  Similarity=0.218  Sum_probs=153.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEE-EccCcChHH--HHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYL-TIISEESDY--IKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~V  195 (311)
                      +......++++|+.+|+++|++++ ++|+||+|+|+|+++++.++  ++++|++|+ +..||+++.  |..+++++|++|
T Consensus        38 ~~~~~~~~~~~r~~la~~lg~~~~-~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v  116 (371)
T PF00266_consen   38 SREFAEILEEAREALAKLLGAPPD-EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV  116 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTSSTT-EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEE
T ss_pred             hhhhhHHHHHHHHHHHHhcCCccc-cccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhh
Confidence            555677789999999999999862 47999999999999999998  467899985 778888665  677777889999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      .++|.+. ++.++.+++++.++++     +++|+++++  .+|+++|+++|.+ ||++|+++++||+|++ |..++|+++
T Consensus       117 ~~i~~~~-~~~~~~~~~~~~l~~~-----~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~-g~~~id~~~  189 (371)
T PF00266_consen  117 RVIPADP-GGSLDLEDLEEALNPD-----TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSA-GCVPIDLDE  189 (371)
T ss_dssp             EEEEEGT-TSSCSHHHHHHHHHTT-----ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTT-TTSS--TTT
T ss_pred             ccccccc-cchhhhhhhhhhhccc-----cceEEeecccccccEEeeeceehhhhhccCCceeEechhcc-ccccccccc
Confidence            9999875 6789999999999864     689999998  5999999999975 7999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +++||+++|+|| |+| |.|+|+||+|+++.+...|
T Consensus       190 ~~~D~~~~s~~K-l~g-p~G~g~l~v~~~~~~~~~p  223 (371)
T PF00266_consen  190 LGADFLVFSSHK-LGG-PPGLGFLYVRPEAIERLRP  223 (371)
T ss_dssp             TTESEEEEESTS-TTS-SSTEEEEEEEHHHHHHHHT
T ss_pred             cccceeeecccc-cCC-CCchhhheehhhhhhcccc
Confidence            999999999999 988 9999999999977665433

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.97  E-value=2.6e-29  Score=244.98  Aligned_cols=174  Identities=16%  Similarity=0.187  Sum_probs=149.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCc
Q 021539          121 GNFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~  193 (311)
                      +..+...++++|+.+|+++|+. ++  +|+||+|+|+++|+++.++   .+++||+|+ +..+|+++  .+..+++..|+
T Consensus        62 ~~~~~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~  139 (406)
T PRK09295         62 SAQATEKMENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGA  139 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCc
Confidence            4455667889999999999984 44  5999999999999999986   357899875 66777754  45666777899


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +++.+|.+. ++.++.++|+++++++     ++||++++.  .||+++|+++|.+ ||++|+++++|++|++ |+.++|+
T Consensus       140 ~v~~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~-g~~~~~~  212 (406)
T PRK09295        140 ELRVIPLNP-DGTLQLETLPALFDER-----TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAV-MHHPVDV  212 (406)
T ss_pred             EEEEEecCC-CCCCCHHHHHHhcCCC-----cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEccccc-CccccCc
Confidence            999999875 6789999999998764     579988876  5999999999965 7999999999999999 9999999


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ..+++||+++|+|| ++| |.|+|+||+++++.+.
T Consensus       213 ~~~~~D~~~~s~~K-~~g-p~G~G~l~~~~~~~~~  245 (406)
T PRK09295        213 QALDCDFYVFSGHK-LYG-PTGIGILYVKEALLQE  245 (406)
T ss_pred             hhcCCCEEEeehhh-ccC-CCCcEEEEEchHhHhh
Confidence            99999999999999 999 9999999999987654

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.96  E-value=2.8e-28  Score=236.82  Aligned_cols=223  Identities=13%  Similarity=0.109  Sum_probs=172.9

Q ss_pred             HHhhccCccC-CcccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcchhh
Q 021539           45 VFAKYPQYYN-GIVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNF  123 (311)
Q Consensus        45 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~G~~  123 (311)
                      +.+.||-+.. .+|.|++++++     ..++......+. ....+++++...                      ...+..
T Consensus         9 ~r~~fp~l~~~~~yld~a~~~~-----~~~~v~~a~~~~-~~~~~~~~~~~~----------------------~~~~~~   60 (401)
T PRK10874          9 FRAQFPALQDAGVYLDSAATAL-----KPQAVIEATQQF-YSLSAGNVHRSQ----------------------FAAAQR   60 (401)
T ss_pred             HHHhCCCcCCceEEEeCCcccC-----CCHHHHHHHHHH-HHhccCCCCCcc----------------------cHHHHH
Confidence            4578887653 68999988771     111121111122 123445544321                      002445


Q ss_pred             hhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCcEEE
Q 021539          124 ISIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKESKVI  196 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~  196 (311)
                      ....++++|+.+|+++|+ +++  +|+||+|+|+++++++.++   .+++|++|+ +..+|+++  .+..+++..|++++
T Consensus        61 ~~~~~~~~r~~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~  138 (401)
T PRK10874         61 LTARYEAAREQVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVV  138 (401)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEE
Confidence            566788999999999999 444  4999999999999999998   467899886 66777754  35666777899999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      .+|.+. ++.++.+++++.++++     ++||++++.  .||.++|+++|.+ ||++|+++++|++|++ |+.++|+..+
T Consensus       139 ~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~-g~~~~~~~~~  211 (401)
T PRK10874        139 KLPLGA-DRLPDVDLLPELITPR-----TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGA-VHFPADVQAL  211 (401)
T ss_pred             EEecCC-CCcCCHHHHHHhcCcC-----cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccc-ccccCCchhc
Confidence            999875 6788999999999765     578888766  6999999999966 6999999999999999 9999999999


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      ++||+++|+|| +|| |.|+|+||++++..+..
T Consensus       212 ~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~  242 (401)
T PRK10874        212 DIDFYAFSGHK-LYG-PTGIGVLYGKSELLEAM  242 (401)
T ss_pred             CCCEEEEeccc-ccC-CCccEEEEEchHHHhcC
Confidence            99999999999 999 99999999998876653

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=3.4e-28  Score=233.87  Aligned_cols=177  Identities=19%  Similarity=0.111  Sum_probs=147.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcCh--HHHHHHHHhCCcE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEES--DYIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~  194 (311)
                      +......++++|+.+++++|+++++  |+||+|+|+|+|+++.++   .+++|++|+ +..+|++  ..+..+. ..|++
T Consensus        38 ~~~~~~~~~~~r~~la~~~g~~~~~--v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~  114 (364)
T PLN02651         38 GWESEDAVEKARAQVAALIGADPKE--IIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFE  114 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCE
Confidence            3445666889999999999998654  999999999999887654   135788876 5667764  3444443 56999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      ++.+|+++ ++.++.++|+++++++     ++||++++.  .||.++|+++|.+ ||++|++++||++|++ |+.++|++
T Consensus       115 v~~v~~~~-~~~~d~~~l~~~i~~~-----t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~-g~~~~~~~  187 (364)
T PLN02651        115 VTYLPVKS-DGLVDLDELAAAIRPD-----TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAV-GKIPVDVD  187 (364)
T ss_pred             EEEEccCC-CCcCCHHHHHHhcCCC-----cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhh-CCcccCcc
Confidence            99999875 6889999999999765     579988866  6999999999966 6999999999999999 99999999


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      ++++||+++|+|| |+| |.|+|+||+|++..+...|.
T Consensus       188 ~~~~D~~~~s~hK-~~g-p~G~g~l~v~~~~~~~l~p~  223 (364)
T PLN02651        188 DLGVDLMSISGHK-IYG-PKGVGALYVRRRPRVRLEPL  223 (364)
T ss_pred             cCCCCEEEechhh-hCC-CCceEEEEEcCCCCCCCCcc
Confidence            9999999999999 777 99999999999877664543

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.96  E-value=1.1e-27  Score=232.30  Aligned_cols=175  Identities=15%  Similarity=0.146  Sum_probs=149.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCc
Q 021539          121 GNFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~  193 (311)
                      +......++++|+.+|+++|++ ++  +|+||+|+|+++++++.++   .+++|++|+ +..+|+++  .+..+++..|+
T Consensus        55 ~~~~~~~~~~~r~~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~  132 (398)
T TIGR03392        55 AQSLTARYELARQQVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGA  132 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence            3445667889999999999995 44  5999999999999999998   367899886 56677754  35556777899


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +++.+|.+. ++.++.++|+++++++     +++|++++.  .||.++|+++|.+ ||++|+++++|++|++ |+.++|+
T Consensus       133 ~v~~v~~~~-~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-~~~~~~~  205 (398)
T TIGR03392       133 KVVKLPIGA-DLLPDIRQLPELLTPR-----TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGV-VHGPPDV  205 (398)
T ss_pred             EEEEEecCC-CCCcCHHHHHHHhccC-----ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhc-CCCCCCh
Confidence            999999875 5778999999999765     578888765  6999999999966 6999999999999999 9999999


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      ..+++||+++|+|| ++| |.|+|+||++++..+..
T Consensus       206 ~~~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~  239 (398)
T TIGR03392       206 QALDIDFYAFSGHK-LYG-PTGIGVLYGKTELLEAM  239 (398)
T ss_pred             hhcCCCEEEEeccc-ccC-CCceEEEEEcHHHHhhC
Confidence            98999999999999 999 99999999998876543

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.95  E-value=7.4e-27  Score=229.14  Aligned_cols=177  Identities=18%  Similarity=0.148  Sum_probs=149.1

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESD--YIKGFAAQKESKV  195 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V  195 (311)
                      ......++++|+.+|+++|+++ .++|+||+|+|++++++++++   .+++|+.|+ +..+|++.  .++.+++..|+++
T Consensus        72 ~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v  150 (424)
T PLN02855         72 AKATDAYELARKKVAAFINAST-SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL  150 (424)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCC-CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence            3344567899999999999963 235999999999999999876   357889886 55677744  3566677789999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      +.+|++. ++.++.++|++.++++     ++||++++.  .||+++|+++|.+ ||++|+++++|++|++ |+.++|+.+
T Consensus       151 ~~v~~~~-~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~-g~~~~~~~~  223 (424)
T PLN02855        151 KFVGLTP-DEVLDVEQLKELLSEK-----TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSV-PHMPVDVQT  223 (424)
T ss_pred             EEEecCC-CCCcCHHHHHHHhccC-----ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhc-CCcCCCchh
Confidence            9999875 4568999999999764     689998876  5999999999966 6999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +++||+++|+|| ++| |.|+|+||++++..+...|
T Consensus       224 ~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~~p  257 (424)
T PLN02855        224 LGADFLVASSHK-MCG-PTGIGFLWGKSDLLESMPP  257 (424)
T ss_pred             cCCCEEEeeccc-ccC-CCccEEEEEchhhhhcCCC
Confidence            999999999999 898 9999999999988765433

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.95  E-value=2.3e-26  Score=223.03  Aligned_cols=173  Identities=16%  Similarity=0.167  Sum_probs=146.8

Q ss_pred             hhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChHH--HHHHHHhCCcE
Q 021539          122 NFISIPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESDY--IKGFAAQKESK  194 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~~--~~~la~~~G~~  194 (311)
                      ......++++|+.+|+++|++ ++  +|+||+|+|+++++++.++.   +.+|+.|+ +..+|++..  ++.+++..|++
T Consensus        58 ~~~~~~~~~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~  135 (403)
T TIGR01979        58 VRATEAYEAVREKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGAT  135 (403)
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence            334456789999999999997 34  59999999999999998763   46789886 566777543  45566677999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      ++.+|.+. ++.++.++|++.++++     +++|++++.  .+|+++|+++|.+ ||++|+++++|++|++ |+.++|+.
T Consensus       136 ~~~v~~~~-~~~~~~~~l~~~i~~~-----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-g~~~~~~~  208 (403)
T TIGR01979       136 LKFIPLDD-DGTLDLDDLEKLLTEK-----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAV-PHMPVDVQ  208 (403)
T ss_pred             EEEEecCC-CCCCCHHHHHHHhccC-----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhc-CccccCcc
Confidence            99999885 7889999999998764     578888876  5999999999966 7999999999999999 99999999


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      .+++||+++|+|| ++| |.|+|+|+++++..+.
T Consensus       209 ~~~~d~~~~s~~K-~~g-p~G~g~l~~~~~~~~~  240 (403)
T TIGR01979       209 ALDCDFYVFSGHK-MYG-PTGIGVLYGKEELLEQ  240 (403)
T ss_pred             ccCCCEEEEeccc-ccC-CCCceEEEEchHHHhc
Confidence            9999999999999 888 9999999999886554

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.94  E-value=3.3e-26  Score=220.50  Aligned_cols=169  Identities=19%  Similarity=0.164  Sum_probs=142.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChH--HHHHHHHhCCcEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--FFKGNYYL-TIISEESD--YIKGFAAQKESKVI  196 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~  196 (311)
                      ......++++|+.+++++|+++++  |+||+|+|+|+++++.++.  +.+|+.|+ +..+|++.  .+.. .++.|++++
T Consensus        38 ~~~~~~~~~~r~~la~~~g~~~~~--i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~-~~~~G~~v~  114 (379)
T TIGR03402        38 GEVGKAVEEAREQVAKLLGAEPDE--IIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQH-LEKQGYKVT  114 (379)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHH-HHHcCCEEE
Confidence            445666889999999999998654  9999999999999888652  24567775 56677743  2333 345799999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      .+|.++ ++.++.+++++.++++     +++|++++.  .+|+++|+++|.+ ||++|+++++|++|++ |+.++|+.++
T Consensus       115 ~v~~~~-~g~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~-g~~~~~~~~~  187 (379)
T TIGR03402       115 YLPVDE-EGRLDLEELRAAITDD-----TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAV-GKIPIDLKEM  187 (379)
T ss_pred             EEccCC-CCcCCHHHHHHhcCCC-----cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccc-cccccCcccC
Confidence            999875 6789999999999764     578888765  6999999999966 6999999999999999 9999999999


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++||+++|+|| ++| |.|+|+||++++.
T Consensus       188 ~~D~~~~s~~K-~~g-p~G~g~l~v~~~~  214 (379)
T TIGR03402       188 NIDMLSLSGHK-LHG-PKGVGALYIRKGT  214 (379)
T ss_pred             CCCEEEEcHHH-cCC-CCceEEEEECCCC
Confidence            99999999999 998 9999999999875

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.94  E-value=4.7e-26  Score=219.85  Aligned_cols=171  Identities=16%  Similarity=0.127  Sum_probs=141.0

Q ss_pred             hhhhhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcCCC----CC-CCEEE-EccCcChHH-HHHHHHhCC
Q 021539          121 GNFISIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESYPF----FK-GNYYL-TIISEESDY-IKGFAAQKE  192 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~~~----~~-Gd~Il-s~~eh~~~~-~~~la~~~G  192 (311)
                      +......++++|+++++.+|+ +++  +|+||+|+||+++++++++.+    ++ +++|+ +..+|++.. ....++..|
T Consensus        37 ~~~~~~~l~~a~~~~~~~~~~~~~~--~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G  114 (382)
T TIGR03403        37 GTATHPAIAEALDKLYKGINARDLD--DIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLG  114 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCC
Confidence            344556678999999999998 444  599999999999999988632    34 45665 667777432 222345679


Q ss_pred             cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC
Q 021539          193 SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       193 ~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld  269 (311)
                      ++++.+|++. ++.++.++|++.++++     +++|++++.  .||+++|+++|.+ +|++|+++++|++|++ |+.++|
T Consensus       115 ~~v~~v~~~~-~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~-g~~~~~  187 (382)
T TIGR03403       115 VEVTYLPINE-QGTITAEQVREAITEK-----TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAI-GKIPVD  187 (382)
T ss_pred             CEEEEEecCC-CCCCCHHHHHHhcccC-----CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhc-CCCccC
Confidence            9999999975 6788999999998764     578888755  6999999999966 6999999999999999 999999


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +.++++||+++|+|| |+| |.|+|+||+|++.
T Consensus       188 ~~~~~~D~~~~s~~K-~~g-p~G~g~l~vr~~~  218 (382)
T TIGR03403       188 VQKAGVDFLSFSAHK-FHG-PKGVGGLYIRKGV  218 (382)
T ss_pred             ccccCCCEEEEcchh-hCC-CCceEEEEECCCC
Confidence            999999999999999 888 9999999999875

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.94  E-value=7.1e-26  Score=216.95  Aligned_cols=190  Identities=12%  Similarity=-0.003  Sum_probs=149.3

Q ss_pred             hHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE-EEEccCcChHHHHH
Q 021539          108 RLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY-YLTIISEESDYIKG  186 (311)
Q Consensus       108 ~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~-Ils~~eh~~~~~~~  186 (311)
                      ++.+.+..+....+......++++|+.+++++|+++++..|+||+|+|+|++.++.++. .+|+. ++.....+...+..
T Consensus        17 ~v~~~~~~~~~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~-~~~~~vlv~~~~~~~~~~~~   95 (363)
T TIGR02326        17 TVKEAMLFDWCTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV-PKDGKLLVVINGAYGARIVQ   95 (363)
T ss_pred             HHHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC-CCCCeEEEEeCChhhHHHHH
Confidence            35555544443345556667889999999999997543469999999999999999985 45555 44333323222345


Q ss_pred             HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      ++++.|++++.+|.++ ++.++.++++++++.++   .+++|++++.  .||+++|+++|.+ ||++|+++++|++|++ 
T Consensus        96 ~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~-  170 (363)
T TIGR02326        96 IAEYLGIPHHVVDTGE-VEPPDVVEVEAILAADP---AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSF-  170 (363)
T ss_pred             HHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhCC---CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccc-
Confidence            5677899999999875 67889999999987532   2457777766  5999999999966 6999999999999999 


Q ss_pred             cCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          264 GEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       264 G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |..|+|+.++++||+++|+|||++| |.|+|+|+++++..+
T Consensus       171 g~~~~~~~~~~~D~~~~s~~K~l~~-p~G~G~l~~~~~~~~  210 (363)
T TIGR02326       171 GGIPIDIAELHIDYLISSANKCIQG-VPGFGFVIARQAELA  210 (363)
T ss_pred             cCcccchhhcCccEEEecCcccccc-CCcceEEEECHHHHH
Confidence            9999999999999999999996666 999999999987654

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.94  E-value=1.5e-25  Score=218.65  Aligned_cols=175  Identities=19%  Similarity=0.126  Sum_probs=145.1

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESKV  195 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V  195 (311)
                      ......++++|+.+|+++|+++++  |+||+|+|+++++++.++.   +.+|+.|+ +..+|++.  .++. ++..|+++
T Consensus        43 ~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~-~~~~g~~v  119 (402)
T TIGR02006        43 WEAEEAVENARNQVAELIGADSRE--IVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRY-LEREGFEV  119 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHH-HHhcCCEE
Confidence            344566789999999999997655  9999999999999887653   35788876 55676643  3333 34569999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ..+|.++ ++.++.++|++.++++     +++|++++.  .+|.++|+++|.+ ||++|+++++|++|++ |+.++|+.+
T Consensus       120 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~-g~~~~~~~~  192 (402)
T TIGR02006       120 TYLPPKS-NGLIDLEELKAAIRDD-----TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSV-GKIPINVNE  192 (402)
T ss_pred             EEEccCC-CCcCCHHHHHHhcCCC-----CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhc-CCcccCccc
Confidence            9999875 7889999999998754     578888766  5999999999966 6999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +++||+++|+|| ++| |.|+|+||++++......|
T Consensus       193 ~~~D~~~~s~~K-~~g-p~G~G~l~~~~~~~~~~~~  226 (402)
T TIGR02006       193 LKVDLMSISGHK-IYG-PKGIGALYVRRKPRVRLEA  226 (402)
T ss_pred             cCCCEEEEehhh-hcC-CCceEEEEEccCCCCCCCc
Confidence            999999999999 888 9999999999876554333

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR01814 kynureninase kynureninase

Probab=99.93  E-value=1.6e-25  Score=218.82  Aligned_cols=169  Identities=17%  Similarity=0.129  Sum_probs=130.9

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC---CEEE-EccCcChH--HHHHHHHhCCcEE----EEEe
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG---NYYL-TIISEESD--YIKGFAAQKESKV----IAAP  199 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G---d~Il-s~~eh~~~--~~~~la~~~G~~V----~~vp  199 (311)
                      +.++++ +++|+++++  |+||+|+|+++|+++.++ +.++   +.|+ +..+|.++  .+...+++.|+++    +.++
T Consensus        74 ~~~~~~-~l~g~~~~~--v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~  149 (406)
T TIGR01814        74 ESLLKL-RLVGAKEDE--VVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIE  149 (406)
T ss_pred             hhhccc-cccCCCCCc--EEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEec
Confidence            444445 899998765  999999999999999987 4443   3565 44677753  3444556678887    4566


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      .++ ++.++.+++++.++...  .++++|+++++  .+|.++|+++|.+ ||++|++++||++|++ |+.|+|+.++++|
T Consensus       150 ~~~-~g~~~~~~l~~~~~~~~--~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~-G~~~id~~~~gvD  225 (406)
T TIGR01814       150 PRE-EETLRLEDILDTIEKNG--DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAV-GNVPLDLHDWGVD  225 (406)
T ss_pred             cCC-CCccCHHHHHHHHHhcC--CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEccccc-CCcccccccCCCC
Confidence            654 57789999988885321  13789999887  5999999999966 7999999999999999 9999999999999


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      |+++|+|||++| |.| |+||++++..+...|
T Consensus       226 ~~~~s~hK~l~g-~pG-~~l~v~~~~~~~~~p  255 (406)
T TIGR01814       226 FACWCTYKYLNA-GPG-AGAFVHEKHAHTERP  255 (406)
T ss_pred             EEEEcCccccCC-CCC-eEEEEehhhhhhcCC
Confidence            999999997666 559 888887765433334

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.93  E-value=6.9e-26  Score=220.37  Aligned_cols=172  Identities=12%  Similarity=-0.030  Sum_probs=136.8

Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCC-CCEEEEccCcChHHHHHHHHhCCc-EE
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFK-GNYYLTIISEESDYIKGFAAQKES-KV  195 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~-Gd~Ils~~eh~~~~~~~la~~~G~-~V  195 (311)
                      +.+......++++|+.+++++|++ ++++|+|++ |+|+++|.++.++ +.+ ++.+++..+|..+....++++.|+ ++
T Consensus        41 hr~~~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v  118 (378)
T PRK03080         41 HRQKPVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSL-LGARRVDHLAWESFGSKWATDVVKQLKLEDP  118 (378)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhc-CCCCcceEEEeCHHHHHHHHHHHhhcCCCCc
Confidence            445566778899999999999995 455799985 9999999999998 553 556666555545433334566788 99


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      +.++.++ ++.+++++++    .      +++|+++|+  .||+++|+++|.+ |++|++++|||+|++ |+.|+|+++ 
T Consensus       119 ~~~~~~~-g~~~d~~~i~----~------~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVDa~qs~-G~~pidv~~-  184 (378)
T PRK03080        119 RVLEADY-GSLPDLSAVD----F------DRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICDATSAA-FALPLDWSK-  184 (378)
T ss_pred             eEeccCC-CCCCCHhhcC----C------CCCEEEEecCCccceeccchhhcc-ccCCCeEEEeccccc-ccCCCCHHH-
Confidence            9998875 5667766532    2      246888887  5899999999977 889999999999999 999999986 


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                       +||+++|+|| |+|+|.|+|+||++++.++...|
T Consensus       185 -iD~~~~s~~K-~l~~P~G~g~l~v~~~~~~~~~p  217 (378)
T PRK03080        185 -LDVYTFSWQK-VLGGEGGHGMAILSPRAVERLES  217 (378)
T ss_pred             -CcEEEEehhh-hCCCCCceEEEEECHHHHHhhhc
Confidence             7999999999 55559999999999988765444

>PRK02769 histidine decarboxylase; Provisional

Probab=99.93  E-value=4.9e-25  Score=215.76  Aligned_cols=183  Identities=12%  Similarity=-0.046  Sum_probs=142.6

Q ss_pred             CCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEE-EccCcChHHHHHHHHh
Q 021539          115 KKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYL-TIISEESDYIKGFAAQ  190 (311)
Q Consensus       115 ~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Il-s~~eh~~~~~~~la~~  190 (311)
                      ++++.+  |..++..++++|+.+|+++|+++++.-.+||+|+|||+++.+.. ..+.++++|+ |..+|++.  ...++.
T Consensus        52 np~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv--~ka~~~  129 (380)
T PRK02769         52 DPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSV--SKIARL  129 (380)
T ss_pred             CccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehH--HHHHHH
Confidence            344444  56677888899999999999986553348999999997765432 2234566765 66777752  233444


Q ss_pred             CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC---cEEEecccccCcc
Q 021539          191 KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA---WHVLLDATGLVFG  264 (311)
Q Consensus       191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g---~~vlvDAaQsv~G  264 (311)
                      .|.++..+|.+. +|++|.++|+++++++  ...+.+|++++.  ++|.+.|+++|.+ ++++|   +++||||+|+. |
T Consensus       130 lg~~~~~V~~~~-~g~id~~~L~~~i~~~--~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg-~  205 (380)
T PRK02769        130 LRIKSRVITSLP-NGEIDYDDLISKIKEN--KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSG-M  205 (380)
T ss_pred             cCCCCceeccCC-CCcCcHHHHHHHHHhC--CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccc-e
Confidence            577777888874 7899999999999865  123678888766  6999999999976 68888   69999999999 9


Q ss_pred             Ccc-------cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          265 EDQ-------LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       265 ~~p-------ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ..|       +|+.. ++|++++|+|| |+|.|.|+|+||+|++..+.
T Consensus       206 ~~p~~~~~~~~d~~~-~vDsis~s~HK-~~~~P~g~G~l~~r~~~~~~  251 (380)
T PRK02769        206 ILPFVNNPPPFSFAD-GIDSIAISGHK-FIGSPMPCGIVLAKKKYVER  251 (380)
T ss_pred             eecccCccccCCccC-CCCEEEECCcc-cCCCCCCcEEEEEehhhhhh
Confidence            995       88877 99999999999 76669999999999977654

>PRK02948 cysteine desulfurase; Provisional

Probab=99.93  E-value=1.1e-24  Score=209.99  Aligned_cols=171  Identities=13%  Similarity=0.017  Sum_probs=142.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChHH-HHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESDY-IKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~~-~~~la~~~G~~V  195 (311)
                      |......++++|+.+|+++|+++++  |+||+|+|+++++++.++.   ..+|+.|+ +..+|++.. ....++..|+++
T Consensus        38 ~~~~~~~~~~~r~~la~~~g~~~~~--i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v  115 (381)
T PRK02948         38 GGTASSLLQVCRKTFAEMIGGEEQG--IYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTV  115 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEE
Confidence            4555667899999999999997654  9999999999998877652   24678876 566777432 223456679999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ..+|.++ ++.++.++|++.++++     +++|++++.  .||+++|+++|.+ |+++|+++++|++|++ |+.++|+.+
T Consensus       116 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~-g~~~~~~~~  188 (381)
T PRK02948        116 TEIPVDK-SGLIRLVDLERAITPD-----TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTF-GKLPIDVFE  188 (381)
T ss_pred             EEEeeCC-CCCCCHHHHHHhcCCC-----CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhc-cccccCccc
Confidence            9999875 6789999999988754     578888765  5999999999966 6999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +++|++++|+|| +|| |.|+|++|++++.
T Consensus       189 ~~~d~~~~s~~K-~~g-p~G~G~l~~~~~~  216 (381)
T PRK02948        189 MGIDSLSVSAHK-IYG-PKGVGAVYINPQV  216 (381)
T ss_pred             CCCCEEEecHHh-cCC-CCcEEEEEEcCCC
Confidence            999999999999 899 9999999999875

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.93  E-value=8.3e-25  Score=214.18  Aligned_cols=193  Identities=10%  Similarity=0.050  Sum_probs=155.0

Q ss_pred             hhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH
Q 021539          107 SRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI  184 (311)
Q Consensus       107 ~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~  184 (311)
                      .++.+.+... ..+.........+++|+.+++++|++++ +.++||+++|++++.++.++ +++||+|+ +..+|.+..|
T Consensus        22 ~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~gt~a~~~a~~~~-~~~Gd~Vlv~~~~~~~~~~   99 (401)
T PLN02409         22 ERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSG-TPFIFPTTGTGAWESALTNT-LSPGDKVVSFRIGQFSLLW   99 (401)
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHhc-CCCCCEEEEeCCCchhHHH
Confidence            3455555333 3344555566788999999999999753 47999999999999888776 67999986 5567777767


Q ss_pred             HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHH-H--HHHCCcEEEeccc
Q 021539          185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWIS-E--AHRNAWHVLLDAT  259 (311)
Q Consensus       185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~-~--a~~~g~~vlvDAa  259 (311)
                      ..++++.|++++.++.++ +..++.++|++++++.+. ..+++|+++++  .||.++|+++|. .  +|++|+++++|++
T Consensus       100 ~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~l~~~~~-~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v  177 (401)
T PLN02409        100 IDQMQRLNFDVDVVESPW-GQGADLDILKSKLRQDTN-HKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGV  177 (401)
T ss_pred             HHHHHHcCCceEEEECCC-CCCCCHHHHHHHHhhCcC-CCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcc
Confidence            677788899999999876 445789999999986210 12678888877  599999999994 5  7889999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      |++ |..++|+.++++||+++|+|||++| |.|+|+|+++++..+.
T Consensus       178 ~s~-g~~~id~~~~~~D~~~~s~~K~l~~-P~G~G~l~~~~~~~~~  221 (401)
T PLN02409        178 SSI-GALDFRMDEWGVDVALTGSQKALSL-PTGLGIVCASPKALEA  221 (401)
T ss_pred             ccc-CCccccccccCccEEEEcCccccCc-CCCcceeEECHHHHHH
Confidence            999 9999999999999999999995555 9999999999877543

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=1.1e-24  Score=208.03  Aligned_cols=171  Identities=22%  Similarity=0.239  Sum_probs=142.0

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCC-CEEE-EccCcChH--HHHHHHHhCCc
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKG-NYYL-TIISEESD--YIKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~G-d~Il-s~~eh~~~--~~~~la~~~G~  193 (311)
                      +......++++|+.+|+++|+++++  |+||+|+|+|+++++.++.   +.+| +.|+ +..+|++.  .++. ++..|+
T Consensus        37 ~~~~~~~~~~~r~~la~~~g~~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~-~~~~G~  113 (353)
T TIGR03235        37 GHNAKKAVERARKQVAEALGADTEE--VIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRA-LERNGF  113 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHH-HHhcCC
Confidence            3445566789999999999998665  9999999999999888763   2355 6665 55666643  3433 345699


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +++.+|.++ ++.++.++|++.++++     +++|++++.  .+|.++|+++|.+ +|++|+++++|++|++ |..++|+
T Consensus       114 ~v~~v~~~~-~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~-g~~~~~~  186 (353)
T TIGR03235       114 TVTYLPVDE-SGRIDVDELADAIRPD-----TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVV-GKITVDL  186 (353)
T ss_pred             EEEEEccCC-CCcCCHHHHHHhCCCC-----CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhc-CCccccc
Confidence            999999875 6789999999998754     578888766  5999999999966 6999999999999999 9999999


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++.++||+++|+|| ++| |.|+|+||++++..
T Consensus       187 ~~~~~D~~~~s~~K-~~g-p~g~g~l~~~~~~~  217 (353)
T TIGR03235       187 SADRIDLISCSGHK-IYG-PKGIGALVIRKRGK  217 (353)
T ss_pred             cccCCCEEEeehhh-cCC-CCceEEEEEccCcc
Confidence            99999999999999 788 99999999999864

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.93  E-value=1.4e-24  Score=211.78  Aligned_cols=169  Identities=20%  Similarity=0.137  Sum_probs=142.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEE
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      ...++++|+.+|+++|+++++  |+||+|+|+|+++++.++.   +.+|+.|+ +..+|++.  .++.+ +..|+++..+
T Consensus        48 ~~~~~~~r~~ia~~~g~~~~~--v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v  124 (404)
T PRK14012         48 EEAVDIARNQIADLIGADPRE--IVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYL  124 (404)
T ss_pred             HHHHHHHHHHHHHHcCcCcCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEE
Confidence            455789999999999997654  9999999999999887653   46789886 56777643  34433 4569999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+. ++.++.++|+++++++     +++|++++.  .+|.++|+++|.+ ||++|+++++|++|++ |..++|+...++
T Consensus       125 ~~~~-~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~-g~~~~~~~~~~~  197 (404)
T PRK14012        125 DPQS-NGIIDLEKLEAAMRDD-----TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSV-GKVPIDLSKLKV  197 (404)
T ss_pred             ccCC-CCcCCHHHHHHhcCCC-----CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhc-CCcccCcccCCC
Confidence            9885 7889999999999764     578888766  5999999999966 6999999999999999 999999999999


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ||+++|+|| ++| |.|+|+||++++....
T Consensus       198 D~~~~s~~K-~~g-p~g~G~l~~~~~~~~~  225 (404)
T PRK14012        198 DLMSFSAHK-IYG-PKGIGALYVRRKPRVR  225 (404)
T ss_pred             CEEEEehhh-ccC-CCceEEEEEecCCCCC
Confidence            999999999 998 9999999999876543

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.92  E-value=6.5e-25  Score=218.20  Aligned_cols=174  Identities=11%  Similarity=0.016  Sum_probs=135.9

Q ss_pred             CCCCcchhhhhHHHHHHHHHHHHHcCCC-C-CCCeEEE--eCCHHHHHHHHHhcCCC-------CCC-----CEEE-Ecc
Q 021539          115 KKTSFKGNFISIPEIQARNRALKHCGLS-E-DEYLVLF--VPNYKEAMLMIGESYPF-------FKG-----NYYL-TII  177 (311)
Q Consensus       115 ~~ss~~G~~~~~~le~aR~~IA~~Lga~-~-dey~VvF--TsnaTealnlv~~s~~~-------~~G-----d~Il-s~~  177 (311)
                      |++++ |..+ ..++++|+.+|++||++ + ++  ++|  |+|+|||+|+++.+...       ..|     .+|+ |..
T Consensus        71 np~s~-~~~~-~le~~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~  146 (431)
T TIGR01788        71 DKDEY-PQTA-EIENRCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSN  146 (431)
T ss_pred             CcccC-ccHH-HHHHHHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCc
Confidence            33443 4444 78899999999999997 3 34  776  79999999987654311       111     2454 566


Q ss_pred             CcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC----
Q 021539          178 SEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN----  250 (311)
Q Consensus       178 eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~----  250 (311)
                      +|.+  |...++..|++++.+|++..++++|+++|+++++++     +.||++++.  ++|+++||++|+. |+++    
T Consensus       147 ~H~s--v~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~-----t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~  219 (431)
T TIGR01788       147 VQVC--WEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDEN-----TIGVVCILGTTYTGEYEDVKALNDALDEYNAKT  219 (431)
T ss_pred             chHH--HHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhC-----CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhh
Confidence            6543  444556679999999998633589999999999875     578888876  7999999999976 6888    


Q ss_pred             --CcEEEeccccc-------CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          251 --AWHVLLDATGL-------VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       251 --g~~vlvDAaQs-------v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                        |+++||||+|+       + ++.++|+...++|++++|+|||.+| |+|+|+||+|++
T Consensus       220 ~~~~~~HvDaaq~g~~~p~~~-~~~~~~~~~~~~DSis~s~HK~~~~-P~g~G~l~~r~~  277 (431)
T TIGR01788       220 GWDIPIHVDAASGGFIAPFVY-PDLEWDFRLPRVKSINVSGHKYGLV-YPGVGWVIWRDE  277 (431)
T ss_pred             CCCceEEEecccHHHHHHHhC-CCchhhcCCCCceEEEECchhccCC-CCCcEEEEEeCh
Confidence              89999999999       6 8888888878899999999994447 999999999986

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PLN03032 serine decarboxylase; Provisional

Probab=99.92  E-value=1.8e-24  Score=211.61  Aligned_cols=183  Identities=13%  Similarity=0.020  Sum_probs=142.0

Q ss_pred             cCCCCcc--hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEE-EEccCcChHHHHHHHH
Q 021539          114 SKKTSFK--GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYY-LTIISEESDYIKGFAA  189 (311)
Q Consensus       114 ~~~ss~~--G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~I-ls~~eh~~~~~~~la~  189 (311)
                      .|+++++  |..++..++++|+.+|+++|+++++..-+||+|+|||+++.+.+.. ..++..+ ++..+|++.  ...++
T Consensus        52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv--~kaa~  129 (374)
T PLN03032         52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAAR  129 (374)
T ss_pred             CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHH--HHHHH
Confidence            3455544  7788899999999999999998776334999999999988665421 1233455 467777642  23345


Q ss_pred             hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC-----cEEEeccccc
Q 021539          190 QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA-----WHVLLDATGL  261 (311)
Q Consensus       190 ~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g-----~~vlvDAaQs  261 (311)
                      ..|.++..||++. +|++|+++|++.++++..  .+.+|++++.  ++|+++||++|++ ++++|     +++||||||+
T Consensus       130 ~lg~~~~~V~~d~-~g~id~~~L~~~i~~~~~--~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~g  206 (374)
T PLN03032        130 MYRMEAVKVPTLP-SGEIDYDDLERALAKNRD--KPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALF  206 (374)
T ss_pred             HcCCCCeEeeeCC-CCcCcHHHHHHHHHHcCC--CCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccch
Confidence            5577888899986 899999999999986421  2567777755  6999999999977 58876     5899999999


Q ss_pred             CccCccc-------CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          262 VFGEDQL-------ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       262 v~G~~pl-------dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      . +..|+       |+. .++|.+++|+|| |+|.|+|+|+|++|++..+
T Consensus       207 g-~~~p~~~~~~~~~~~-~~vDSis~s~HK-~~g~P~g~G~ll~r~~~~~  253 (374)
T PLN03032        207 G-LMMPFVSRAPEVTFR-KPIGSVSVSGHK-FLGCPMPCGVALTRKKHVK  253 (374)
T ss_pred             h-hhhhccCCCcccCCC-cCCcEEEECccc-ccCCCcCeEEEEEEchhhH
Confidence            9 99985       554 379999999999 8777999999999987653

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.92  E-value=1.4e-23  Score=200.96  Aligned_cols=168  Identities=17%  Similarity=0.149  Sum_probs=141.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEEeCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~  201 (311)
                      ...++++|+.+++++|+++. ++|+||+|+|+++++++.++ +++|+.|+ +..+|.+.  .+..+++..|.+++.++.+
T Consensus        43 ~~~~~~~~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~  120 (376)
T TIGR01977        43 SREVEETRQLLAKLFNAPSS-AHVVFTNNATTALNIALKGL-LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD  120 (376)
T ss_pred             HHHHHHHHHHHHHHhCcCCC-CeEEEeCCHHHHHHHHHHhc-cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC
Confidence            45678999999999999643 36999999999999999885 57889986 44566532  3455566679999999987


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                      . ++.++.++|+++++++     +++|++++.  .||.++|+++|.+ ||++|+++++|++|++ |..++|+...++||+
T Consensus       121 ~-~~~~d~~~l~~~~~~~-----~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~-g~~~~~~~~~~~D~~  193 (376)
T TIGR01977       121 N-EGLISPERIKRAIKTN-----TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTA-GVIPIDMTELAIDML  193 (376)
T ss_pred             C-CCCcCHHHHHHhcCCC-----CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhcc-CccCCCchhcCCCEE
Confidence            5 6778999999998754     578887765  5999999999966 6999999999999999 999999999999999


Q ss_pred             EEccccCcCCCCCceEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|+|||++| |.|+|+|+++++.
T Consensus       194 ~~s~~K~l~~-p~g~g~l~~~~~~  216 (376)
T TIGR01977       194 AFTGHKGLLG-PQGTGGLYIREGI  216 (376)
T ss_pred             EecccccccC-CCCceEEEEcCCc
Confidence            9999995556 9999999999886

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.91  E-value=2.7e-23  Score=200.93  Aligned_cols=172  Identities=15%  Similarity=0.143  Sum_probs=143.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEe
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAP  199 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp  199 (311)
                      ....+++|+.+++++|+++++  |+||+|+|++++++..++  .+++|++|++ ..+|.+.  .+..+++..|+++..++
T Consensus        59 ~~~~~~l~~~ia~~~~~~~~~--v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~  136 (397)
T TIGR01976        59 DQVVDDAREAVADLLNADPPE--VVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWAR  136 (397)
T ss_pred             HHHHHHHHHHHHHHcCCCCCe--EEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEe
Confidence            345689999999999997654  999999999999888776  4678999874 4566543  34455677899999999


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      .+.+++.++.+++++.++++     +++|++++.  .+|.++|+++|.+ ||++|+++++|++|++ |..++|+.++++|
T Consensus       137 ~~~~~~~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~~~d  210 (397)
T TIGR01976       137 VDEATGELHPDDLASLLSPR-----TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYA-PHGLIDVQATGAD  210 (397)
T ss_pred             ccccCCCcCHHHHHHhcCCC-----ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhc-cccCCCHHHcCCC
Confidence            87546788999999999764     578888765  5999999999976 6999999999999999 9999999999999


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCcccC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTS  307 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~  307 (311)
                      |+++|+|| |+| | ++|+++++++..+...
T Consensus       211 ~~~~s~~K-~~g-~-~~G~l~~~~~~~~~l~  238 (397)
T TIGR01976       211 FLTCSAYK-FFG-P-HMGILWGRPELLMNLP  238 (397)
T ss_pred             EEEEechh-hcC-C-ceEEEEEcHHHHhhCC
Confidence            99999999 788 7 4999999987755433

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.90  E-value=1.1e-22  Score=195.05  Aligned_cols=189  Identities=10%  Similarity=0.007  Sum_probs=146.0

Q ss_pred             HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHH
Q 021539          109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGF  187 (311)
Q Consensus       109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~l  187 (311)
                      +.+.+...............+++|+.+++++|++++...|+||+|+|++++.++.++. .+|+.++ ....+....+...
T Consensus        20 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-~~~~~vlv~~~~~~~~~~~~~   98 (368)
T PRK13479         20 VREAMLRDWGSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-PRDGKVLVPDNGAYGARIAQI   98 (368)
T ss_pred             HHHHhCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-CCCCeEEEEeCCchHHHHHHH
Confidence            4444433333222223346789999999999997544468899999999999999985 4566654 4333333333455


Q ss_pred             HHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCcc
Q 021539          188 AAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       188 a~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                      ++..|+++..+|.++ ++.++.+++++.+++++   .+++|.+++.  .||.++|+++|.+ ||++|+++++|++|++ |
T Consensus        99 ~~~~g~~~~~i~~~~-~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-g  173 (368)
T PRK13479         99 AEYLGIAHVVLDTGE-DEPPDAAEVEAALAADP---RITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-G  173 (368)
T ss_pred             HHHcCCcEEEEECCC-CCCCCHHHHHHHHHhCC---CCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-C
Confidence            677899999999875 56789999999887532   2457777665  5999999999966 6999999999999999 9


Q ss_pred             CcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          265 EDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       265 ~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ..++|+.++++|++++|+|||++| |.|+|+++++++..+
T Consensus       174 ~~~~~~~~~~~d~~v~s~~K~l~g-~~G~G~l~~~~~~~~  212 (368)
T PRK13479        174 AIPIDIAELGIDALISSANKCIEG-VPGFGFVIARRSELE  212 (368)
T ss_pred             CccccccccCceEEEecCcccccc-CCCceEEEECHHHHH
Confidence            999999999999999999996667 899999999987543

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.90  E-value=4.8e-24  Score=205.72  Aligned_cols=168  Identities=11%  Similarity=0.122  Sum_probs=125.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCC--CCCCCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYP--FFKGNYYL-TIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      ......++++|+.++++||++ ++++|+||+| +|+|+|+++.++.  +.+|++|+ ...+|+   +..+++++|+++++
T Consensus        40 ~~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~---~~~~a~~~g~~~~~  115 (355)
T cd00611          40 KDFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAK---AAKEAKRYGGVVVI  115 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH---HHHHHHhcCCCcEE
Confidence            455577899999999999984 4567999998 9999999999983  23566665 444433   34466778999999


Q ss_pred             EeCCCCCccc-C-HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539          198 APETWLDLRI-K-GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~i-d-~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      ++.+. ++.. + .+..+..++++     +++|+++|+  +||++++  +|.  +.+|++++|||+|++ |+.|+|++++
T Consensus       116 ~~~~~-~g~~~~~~~~~~~~~~~~-----~~lV~~~h~~t~tG~~~~--~i~--~~~g~~~~VDa~qs~-g~~~idv~~~  184 (355)
T cd00611         116 VAAKE-EGKYTKIPDVETWDLAPD-----AAYVHYCSNETIHGVEFD--EVP--DTGGVPLVADMSSNI-LSRPIDVSKF  184 (355)
T ss_pred             Eeccc-ccCCCCCCCHhhcCCCCC-----CCEEEEeCCcccccEEcc--eec--ccCCCeEEEEccccc-cCCCCCHHHh
Confidence            98753 2222 3 22222334433     679999988  5898743  333  458999999999999 9999999986


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      ++  +++|+|| +|| |.|+|+||+|+++.+...|
T Consensus       185 ~~--~~ss~~K-~lG-P~G~g~l~~~~~~~~~~~~  215 (355)
T cd00611         185 GV--IYAGAQK-NLG-PAGVTVVIVRKDLLGKARK  215 (355)
T ss_pred             CE--EEeeccc-ccC-CCceEEEEECHHHHhhccc
Confidence            64  4477999 899 9999999999988765443

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.90  E-value=1.9e-22  Score=192.09  Aligned_cols=189  Identities=11%  Similarity=0.105  Sum_probs=150.7

Q ss_pred             chhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHH
Q 021539          106 PSRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~  183 (311)
                      +.++.+.+.+. .++.+.......+++|+.+++++|+++ ++.++||+|+|+|+++++.++ +.+|+.|++. .+|.++.
T Consensus        11 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~~~~~~~~t~al~~~~~~~-~~~g~~vl~~~~~~~~~~   88 (356)
T cd06451          11 PPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTEN-GLTFLLSGSGTGAMEAALSNL-LEPGDKVLVGVNGVFGDR   88 (356)
T ss_pred             CHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCC-CCEEEEecCcHHHHHHHHHHh-CCCCCEEEEecCCchhHH
Confidence            44466666443 334444555667899999999999953 346889999999999999988 4689998754 4555544


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...++..|++++.+|.+. ++.++.+++++.+++ +     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++
T Consensus        89 ~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~i~~~~-----~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~  162 (356)
T cd06451          89 WADMAERYGADVDVVEKPW-GEAVSPEEIAEALEQHD-----IKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAV  162 (356)
T ss_pred             HHHHHHHhCCCeEEeecCC-CCCCCHHHHHHHHhccC-----CCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeee
Confidence            4555677799999999875 567899999999976 3     567777655  5999999999976 6999999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |++ |..++++...++|++++|+|| ++|+|.|+|+|+++++..+
T Consensus       163 ~~~-g~~~~~~~~~~~d~~~~s~~K-~l~~p~g~G~l~~~~~~~~  205 (356)
T cd06451         163 SSL-GGEPFRMDEWGVDVAYTGSQK-ALGAPPGLGPIAFSERALE  205 (356)
T ss_pred             hhc-cCccccccccCccEEEecCch-hccCCCCcceeEECHHHHH
Confidence            999 999999988899999999999 6655999999999987543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.89  E-value=1.8e-22  Score=193.42  Aligned_cols=175  Identities=17%  Similarity=0.177  Sum_probs=144.2

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEE-EccCcChH--HHHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYL-TIISEESD--YIKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Il-s~~eh~~~--~~~~la~~~G~~V  195 (311)
                      +.......+++|+.+++++|+++ ..+|+||+|+|+|+++++.++...  +|++|+ +..+|.+.  .+..+++..|+++
T Consensus        38 ~~~~~~~~~~~~~~la~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~  116 (373)
T cd06453          38 SARATDAYEAAREKVARFINAPS-PDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKL  116 (373)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEE
Confidence            34455667899999999999972 235999999999999999998654  788886 44555543  3445566679999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      +.+|.+. ++.++.++|++.+.++     +++|.+++.  .+|.+.|+++|.+ |+++|+++++|++|+. |..++++.+
T Consensus       117 ~~v~~~~-~~~~d~~~l~~~l~~~-----~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~  189 (373)
T cd06453         117 KVVPVDD-DGQLDLEALEKLLTER-----TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSA-GHMPVDVQD  189 (373)
T ss_pred             EEeecCC-CCCcCHHHHHHHhcCC-----ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhc-Cceeeeccc
Confidence            9999885 7889999999999764     578887765  5999999999965 7999999999999999 999999998


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +++|++++|+|| ++| |.|+|+++++++..+.
T Consensus       190 ~~~d~~~~s~~K-~~~-~~g~g~~~~~~~~~~~  220 (373)
T cd06453         190 LGCDFLAFSGHK-MLG-PTGIGVLYGKEELLEE  220 (373)
T ss_pred             cCCCEEEecccc-ccC-CCCcEEEEEchHHhhc
Confidence            999999999999 788 5799999999876654

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.89  E-value=1.3e-22  Score=201.90  Aligned_cols=173  Identities=13%  Similarity=0.007  Sum_probs=132.9

Q ss_pred             chhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEe---CCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH--HHHHHh--
Q 021539          120 KGNFISIPEIQ-ARNRALKHCGLSEDEYLVLFV---PNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI--KGFAAQ--  190 (311)
Q Consensus       120 ~G~~~~~~le~-aR~~IA~~Lga~~dey~VvFT---snaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~--~~la~~--  190 (311)
                      .|......+|+ +|++++++||+++++  ++||   +++|+|+++++.++ +++||+|+ +..+|.+...  ..+.+.  
T Consensus        73 ~g~~~~~~iE~~ar~~~a~lf~a~~~~--~~~~~~~~sgt~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~  149 (452)
T PTZ00094         73 GGNEVVDKIENLCQKRALEAFGLDPEE--WGVNVQPYSGSPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHGFYTAKKKV  149 (452)
T ss_pred             ccchHHHHHHHHHHHHHHHHhCCCccc--ceeecCCCchHHHHHHHHHHh-cCCCCEEEecccccCCccccccccccccc
Confidence            47777888884 999999999997665  8888   89999999999998 68899987 5667764322  211111  


Q ss_pred             ----CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccC
Q 021539          191 ----KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE  265 (311)
Q Consensus       191 ----~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~  265 (311)
                          .++++...+++. +|.+|.++|++.+++.    ++++|.+....+|.++|+++|++ ||++|++++||++|++ |+
T Consensus       150 ~~~~~~~~~~~~~~~~-~g~id~~~L~~~l~~~----~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~-G~  223 (452)
T PTZ00094        150 SATSIYFESLPYQVNE-KGLIDYDKLEELAKAF----RPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTS-GL  223 (452)
T ss_pred             ccceeeeeeeecccCC-CCCcCHHHHHHHHHHh----CCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchh-cc
Confidence                124445556665 5899999999999642    13466554336999999999976 6999999999999999 99


Q ss_pred             cccCCCC---CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          266 DQLALAL---HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       266 ~pldl~~---l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +++|+..   .++||+++|+|||++| |.| |+++++++..
T Consensus       224 i~~~~~~~~~~~~D~l~~S~hK~l~G-P~G-g~l~~~~~~~  262 (452)
T PTZ00094        224 VAAGVLPSPFPYADVVTTTTHKSLRG-PRS-GLIFYRKKVK  262 (452)
T ss_pred             ccCCCCCCCCCCCcEEEcCCccCCCC-CCc-eEEEEecccc
Confidence            9887643   3699999999996667 998 8888887653

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.88  E-value=1.4e-21  Score=184.57  Aligned_cols=173  Identities=11%  Similarity=0.020  Sum_probs=138.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEE-EEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYY-LTIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~I-ls~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....+++|+.+++++|++++...|+||+|+|++++.++.++. .+++.+ +....++...+...++..|.++..++.++ 
T Consensus        30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~-  107 (355)
T TIGR03301        30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE-  107 (355)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC-
Confidence            466789999999999998654468899999999999999874 345554 44333332223445667799999999875 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                      ++.++.+++++.+++++   ...++++++.  .+|+++|+++|.+ |+++|+++++|++|++ |..++++..+++|++++
T Consensus       108 ~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~-g~~~~~~~~~~~d~~~~  183 (355)
T TIGR03301       108 YEPPDLNRIEEALAADP---DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSF-GAIPIDIEELDVDALIA  183 (355)
T ss_pred             CCCCCHHHHHHHHHhCC---CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEecccc-CCcccchhhcCccEEEe
Confidence            56789999999987532   2457776655  5899999999976 6999999999999999 99999999999999999


Q ss_pred             ccccCcCCCCCceEEEEEeCCCCc
Q 021539          281 TLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |+|||++| |.|+|+++++++..+
T Consensus       184 s~~K~l~~-~~G~g~~~~~~~~~~  206 (355)
T TIGR03301       184 SANKCLEG-VPGFGFVIARRDLLE  206 (355)
T ss_pred             cCCccccc-CCceeEEEECHHHHH
Confidence            99995556 889999999987643

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.87  E-value=9.8e-21  Score=184.33  Aligned_cols=174  Identities=16%  Similarity=0.143  Sum_probs=140.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEe
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      +......++++|+.+|+++|++  +  ++||+|+|+|+++++.++ +.+|+.|++ ..+|.+..  ..++..|+++..+|
T Consensus        58 ~~~~~~~~~~l~~~lA~~~g~~--~--~~~~~g~t~a~~~al~~l-~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~  130 (387)
T PRK09331         58 DQIKKPPIADFHEDLAEFLGMD--E--ARVTHGAREGKFAVMHSL-CKKGDYVVLDGLAHYTSY--VAAERAGLNVREVP  130 (387)
T ss_pred             ccccChHHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHh-cCCCCEEEECCCchHHHH--HHHHHcCCEEEEEe
Confidence            4444556889999999999994  3  889999999999999988 578998864 44554432  23456799999999


Q ss_pred             C--CCCCcccCHHHHHhhhhccCC--CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          200 E--TWLDLRIKGSQLSQNFRRKCK--YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       200 ~--~~~~g~id~~~L~~~l~~~~~--~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      .  ++ ++.++.+++++.+++...  ...+++|++++.  .+|.++|+++|.+ ||++|+++++|++|++ |..|+++..
T Consensus       131 ~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~-g~~~~~~~~  208 (387)
T PRK09331        131 KTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTV-GRMPVDGKK  208 (387)
T ss_pred             CccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-CCcCCCHHH
Confidence            8  54 677999999998874210  013678888766  5999999999976 6999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +++|++++|+|| ++|+|.|+|+++++++.++
T Consensus       209 ~g~D~~~~s~~K-~l~~~~~~G~l~~~~~~i~  239 (387)
T PRK09331        209 LGADFIVGSGHK-SMAASAPSGVLATTEEYAD  239 (387)
T ss_pred             cCCCEEEeeCcc-cccCCCCEEEEEECHHHHh
Confidence            999999999999 5555889999999887554

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.86  E-value=1.8e-21  Score=188.83  Aligned_cols=168  Identities=12%  Similarity=-0.001  Sum_probs=126.5

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhC--CcE
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQK--ESK  194 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~--G~~  194 (311)
                      ++........++++|+.+++++|++ ++++|+|| +|+|.|+|.++.++...++. +++. +++...+...+...  +.+
T Consensus        33 ~hr~~~f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~~~l-~i~~-G~~~~~~~~~a~~~~~~~~  109 (361)
T TIGR01366        33 SHRQAPVKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEKKSL-HLSF-GEFSSKFAKAVKLAPWLGE  109 (361)
T ss_pred             CcCChHHHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhccccccc-EEec-CHHHHHHHHHHHhhhccCC
Confidence            4556777788999999999999995 35679997 66999999999998433322 2333 33433343333321  226


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      +..++.++ +..++.     .+.++     +++|+++|+  ++|+++|+++|  +|++|++++|||+|++ |+.++|+++
T Consensus       110 ~~~~~~~~-~~~~~~-----~~~~~-----~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~-g~~~idv~~  175 (361)
T TIGR01366       110 PIIVTADP-GSAPEP-----QADPG-----VDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGA-GGLPVDIAE  175 (361)
T ss_pred             ceEEecCC-CCCCCC-----ccCCC-----CCEEEEcccCCccceecccccc--cccCCCeEEEEcCccc-cCCCCCHHH
Confidence            77777765 333332     23333     689999988  69999999998  4889999999999999 999999985


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                        +||++||+|| ++|.|.|+++++++++.++.
T Consensus       176 --~D~~~~s~~K-~lg~~~Gl~~~~~s~~~~~~  205 (361)
T TIGR01366       176 --TDVYYFAPQK-NFASDGGLWLAIMSPAALER  205 (361)
T ss_pred             --CCEEEEEchh-hcCCCCceEEEEECHHHHhh
Confidence              9999999999 88868899999999977654

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.84  E-value=1.6e-20  Score=181.66  Aligned_cols=165  Identities=12%  Similarity=0.121  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ....++++|+.++++||++ ++|+|+|++| +|+||+.++.++. .+|+.++ ...+.....+.+.+++.|. +..+..+
T Consensus        35 f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~  111 (349)
T TIGR01364        35 FEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASG  111 (349)
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEecc
Confidence            3467789999999999984 4567999976 9999999999984 3677653 3334334446677888898 7776643


Q ss_pred             ----CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          202 ----WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       202 ----~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                          | ...+++++++  +++     ..++|+++|+  +||+.+|  ++  ++.++++++|||+|++ |+.|+|+++  .
T Consensus       112 ~~~~~-~~~~~~~~~~--~~~-----~~~~v~~th~ETstGv~~~--~l--~~~~~~l~iVDavss~-g~~~id~~~--~  176 (349)
T TIGR01364       112 KEGNY-TKIPDPSTWE--ISE-----DAAYVHYCANETIHGVEFR--EL--PDVKNAPLVADMSSNI-LSRPIDVSK--F  176 (349)
T ss_pred             ccCCC-CCCCCHHhcC--CCC-----CCCEEEEcCCCCcccEecc--ee--cccCCCeEEEEccccc-cCccCCHHH--c
Confidence                2 2234555444  222     2579999988  6999988  22  3567999999999999 999999986  5


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      ||+++|+|| ++| |.|+|+|++++++++...|
T Consensus       177 d~~~~ssqK-~lg-P~Glg~l~~s~~~~~~~~~  207 (349)
T TIGR01364       177 GLIYAGAQK-NIG-PAGLTVVIVRKDLLGRASR  207 (349)
T ss_pred             cEEEEeccc-ccC-CCceEEEEECHHHHhhccc
Confidence            699999999 899 9999999999988765444

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.83  E-value=3.6e-20  Score=199.03  Aligned_cols=169  Identities=14%  Similarity=0.093  Sum_probs=137.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHH----HHHHHHHhcCCCCCCC----EEE-EccCcChHHHHHHHHhCCcEEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYK----EAMLMIGESYPFFKGN----YYL-TIISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaT----ealnlv~~s~~~~~Gd----~Il-s~~eh~~~~~~~la~~~G~~V~  196 (311)
                      ..++++|+.+++++|+  ++  |+||+|+|    +|+|+++++|--.+|+    +|+ +..+|++|.. . +...|++|+
T Consensus       568 ~~~~~~r~~la~i~g~--~~--v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a-~-a~~~G~~vv  641 (993)
T PLN02414        568 EMFEDLGDLLCEITGF--DS--FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA-S-AAMCGMKIV  641 (993)
T ss_pred             HHHHHHHHHHHHHhCC--Ce--EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH-H-HHHCCCEEE
Confidence            4467999999999999  34  99999999    9999999999323376    554 6778886642 1 223699999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cccCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQLALAL  272 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pldl~~  272 (311)
                      .+|.+. +|.+|.++|+++++++++  ++++|++++.  +.|...||++|.+ +|++|++|++||+|++ ++ ..++..+
T Consensus       642 ~v~~d~-~G~vDle~L~~~i~~~~~--~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~-a~~~l~~p~~  717 (993)
T PLN02414        642 VVGTDA-KGNINIEELRKAAEAHKD--NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMN-AQVGLTSPGF  717 (993)
T ss_pred             EeccCC-CCCcCHHHHHHHHhccCC--CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHH-hccCcCCccc
Confidence            999975 789999999999985321  3678888765  5899999999976 6999999999999999 98 6667788


Q ss_pred             CCCcEEEEccccCcCCCCC-----ceEEEEEeCCCCcc
Q 021539          273 HRPDLVLCTLDNNTHAQPL-----KITCLLVRRKSFDT  305 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~-----GiG~L~vr~~~~~~  305 (311)
                      +++||++||+||||+| |.     |+|+|++++.+...
T Consensus       718 ~GaD~~~~s~HK~f~~-P~G~GGPg~G~l~~~~~L~p~  754 (993)
T PLN02414        718 IGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPF  754 (993)
T ss_pred             cCCCEEEecCCccCCc-CcccCCCCeeeEEEchhhccc
Confidence            9999999999996553 55     59999999876543

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.83  E-value=3e-20  Score=180.38  Aligned_cols=170  Identities=13%  Similarity=0.081  Sum_probs=125.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ........+++|+.++++||++ ++|+|+|++ ++|.++..++.++- .+|+.++ ...+.....+.+.+++.|.. ..+
T Consensus        43 ~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~-~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~  119 (360)
T PRK05355         43 SKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLL-GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVA  119 (360)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEE
Confidence            4444577899999999999984 456688875 56666777777663 4566653 22232233456777787865 556


Q ss_pred             eCCCCCcccCHHHHHh-hhhccCCCCCceEEEEecc--cccchh-cHHHHHHHHHCCcEEEecccccCccCcccCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQ-NFRRKCKYTPKGLFSYPVV--VNGTRY-SMHWISEAHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       199 p~~~~~g~id~~~L~~-~l~~~~~~~~t~LVs~~~~--~tG~i~-Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      +.++..+..+..++++ .++++     +++|+++|+  +||+++ ||.+|     +|++++|||+|++ |+.|+|++++ 
T Consensus       120 ~~~~~~g~~~~~~~~~~~l~~~-----~~~V~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~-g~~~idv~~~-  187 (360)
T PRK05355        120 ASSEDDGFTYIPPLDEWQLSDD-----AAYVHYTSNETIDGTEFHELPDT-----GDVPLVADMSSDI-LSRPIDVSKF-  187 (360)
T ss_pred             ecccccCCCCCCChhhccCCCC-----CCEEEEccCCCcceEecCccccc-----CCCcEEEEcCccc-cCccCCHHHc-
Confidence            5543234445445544 66543     579999988  699998 77766     7999999999999 9999999875 


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                       ||++||+|| ++| |.|+|+||+++++++...|
T Consensus       188 -d~~~~ssqK-~lg-P~Glg~l~~s~~~l~~~~~  218 (360)
T PRK05355        188 -GLIYAGAQK-NIG-PAGLTIVIVREDLLGRALP  218 (360)
T ss_pred             -cEEEEeccc-ccc-CCceEEEEECHHHHhhccc
Confidence             799999999 889 9999999999998876555

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.81  E-value=9.5e-19  Score=167.02  Aligned_cols=164  Identities=13%  Similarity=-0.042  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ..++++|+.+|+++|++++.  ++||+|+|++++.++.++   .++++++|+ +..+|.+  +...++..|.+++.+|.+
T Consensus        59 ~~~~~~~~~la~~~g~~~~~--~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~~  134 (371)
T PRK13520         59 KLEEEAVEMLGELLHLPDAY--GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS--FDKAADMLGVELRRAPLD  134 (371)
T ss_pred             HHHHHHHHHHHHHhCCCCCC--eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH--HHHHHHHcCceEEEecCC
Confidence            44579999999999997543  899999999988876543   234567776 4555543  455566679999999987


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-------cCCC
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-------LALA  271 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-------ldl~  271 (311)
                      + ++.++.++|++.++++     +.+|++.+.  .+|.+.|+++|.+ ||++|++++||++|+. +..+       +|+.
T Consensus       135 ~-~~~~d~~~l~~~i~~~-----~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~~~~  207 (371)
T PRK13520        135 D-DYRVDVKAVEDLIDDN-----TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGG-FVIPFLDDPPNFDFS  207 (371)
T ss_pred             C-CCcCCHHHHHHHHhhC-----CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchh-HHHHhhcCCCCcccc
Confidence            6 6789999999999764     344544433  6999999999976 6999999999999986 6433       4555


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      ..++|++++|+|| |.+.|.++|+++++++
T Consensus       208 ~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~  236 (371)
T PRK13520        208 LPGVDSITIDPHK-MGLAPIPAGGILFRDE  236 (371)
T ss_pred             CCCCceEEECCcc-ccCccCCceEEEEcCH
Confidence            5789999999999 5444888999998764

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.80  E-value=1.7e-18  Score=169.50  Aligned_cols=189  Identities=12%  Similarity=0.135  Sum_probs=157.3

Q ss_pred             HHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHH
Q 021539          109 LLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKG  186 (311)
Q Consensus       109 l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~  186 (311)
                      .+..+..+ .++.-........++++.+..+++++. .+.+++++++|.|+...+.++ ..+||+|+ ...+-....|.+
T Consensus        20 V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~-~~~~ll~gsGt~amEAav~sl-~~pgdkVLv~~nG~FG~R~~~   97 (383)
T COG0075          20 VLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTEN-GDVVLLSGSGTLAMEAAVASL-VEPGDKVLVVVNGKFGERFAE   97 (383)
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-CcEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCChHHHHHHH
Confidence            44444444 343445555677899999999999973 346778899999999998888 46899985 555666777888


Q ss_pred             HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      .+++.|.+|..+...| +..++++++++.|+++.   ..++|++.|+  +||+++|+++|++ ++++|++++|||+.++ 
T Consensus        98 ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~~~---~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~-  172 (383)
T COG0075          98 IAERYGAEVVVLEVEW-GEAVDPEEVEEALDKDP---DIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSL-  172 (383)
T ss_pred             HHHHhCCceEEEeCCC-CCCCCHHHHHHHHhcCC---CccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccC-
Confidence            8999999999999988 66899999999998542   2568998888  6999999999977 5999999999999999 


Q ss_pred             cCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          264 GEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       264 G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      |-.+++++++++|+++.+.+| +++.|+|+|++.++++.++.
T Consensus       173 Gg~~~~vd~wgiDv~itgSQK-~l~~PPGla~v~~S~~a~e~  213 (383)
T COG0075         173 GGEPLKVDEWGIDVAITGSQK-ALGAPPGLAFVAVSERALEA  213 (383)
T ss_pred             CCcccchhhcCccEEEecCch-hccCCCccceeEECHHHHHH
Confidence            999999999999999999999 77779999999999877653

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.80  E-value=1.9e-18  Score=171.96  Aligned_cols=160  Identities=11%  Similarity=-0.011  Sum_probs=128.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcC--hHHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEE--SDYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|+.  .  .+||+|+|+|+++++.++ +++||+|+ +..+|.  .+.+...+.+.|+++++
T Consensus        59 ~R~~~p~~~~le~~lA~l~g~~--~--av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~  133 (433)
T PRK08134         59 SRISNPTVAVLEERVAALEGGV--G--AIATASGQAALHLAIATL-MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTF  133 (433)
T ss_pred             ecCcChHHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence            3444455778999999999984  2  799999999999999888 78999986 556665  23344444567999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      |+++++++++++     |++|.+.+.  .+|.++|+++|.+ ||++|+++++|++|+. |....++ +++
T Consensus       134 vd~~------d~~~l~~~i~~~-----TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~-~~~~~pl-~~G  200 (433)
T PRK08134        134 VKPG------DIDGWRAAIRPN-----TRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT-PYLLRPF-EHG  200 (433)
T ss_pred             ECCC------CHHHHHHhcCCC-----CeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcC
Confidence            8864      578899999875     578877655  5899999999976 6999999999999999 9887776 689


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +|++++|+|| ++| |.|  +|.+++..
T Consensus       201 aD~vv~S~tK-~l~-g~g~~~gG~v~~~  226 (433)
T PRK08134        201 ADLVYHSATK-FLG-GHGTAIGGVLVDG  226 (433)
T ss_pred             CCEEEecccc-ccC-CCCCceEEEEEec
Confidence            9999999999 777 556  78888753

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.79  E-value=2.2e-18  Score=165.54  Aligned_cols=169  Identities=18%  Similarity=0.167  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ..+.+.|+.+|+++|+  ++  |+||+|+|+++++++.++ ..+|+.|+.. .+|.+..  ..++..|++++.+|.++ +
T Consensus        44 ~~~~~l~~~la~~~g~--~~--i~~~~g~t~al~~~l~~~-~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~-~  115 (361)
T cd06452          44 PPIKDFHHDLAEFLGM--DE--ARVTPGAREGKFAVMHSL-CEKGDWVVVDGLAHYTSY--VAAERAGLNVREVPNTG-H  115 (361)
T ss_pred             chHHHHHHHHHHHcCC--ce--EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCcchHHH--HHHHhcCCEEEEEecCC-C
Confidence            3567999999999999  33  999999999999999887 5689988744 5565432  23566799999999875 3


Q ss_pred             c--ccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcE
Q 021539          205 L--RIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDL  277 (311)
Q Consensus       205 g--~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Df  277 (311)
                      +  .++.++|++.+++..+.  .++++|.+++.  .+|.+.|+++|.+ +|++|+++++|++|+. |..+++..++++|+
T Consensus       116 ~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~-g~~~~~~~~~~~d~  194 (361)
T cd06452         116 PEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTV-GRMPVSGKELGADF  194 (361)
T ss_pred             CCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCccc-CCcCCCHHHcCCCE
Confidence            3  78999999888641110  12578877655  5999999999976 6999999999999999 99999988889999


Q ss_pred             EEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +++|+|| ++|.|.++|+++++++..+
T Consensus       195 ~~~s~~K-~l~~~~~~G~l~~~~~~~~  220 (361)
T cd06452         195 IVGSGHK-SMAASAPIGVLATTEEWAD  220 (361)
T ss_pred             EEecCCc-cccCCCCeEEEEECHHHHH
Confidence            9999999 6555788999999876543

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.78  E-value=9.8e-18  Score=160.40  Aligned_cols=164  Identities=13%  Similarity=-0.007  Sum_probs=123.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---C--CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEe
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---F--FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~--~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      ...+++|+.+|+++|++++.  +++|+|+|+++..++.++.   +  .+|+.|++. .+|.+  +...++..|++++.+|
T Consensus        59 ~~~~~~~~~la~~~g~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~--~~~~~~~~G~~~~~v~  134 (373)
T TIGR03812        59 KIEEEVVGSLGNLLHLPDAY--GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS--FEKAAEMLGLELRYAP  134 (373)
T ss_pred             HHHHHHHHHHHHHhCCCCCC--eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH--HHHHHHHcCCeEEEEe
Confidence            45579999999999997544  8889999999877655431   1  356787644 44433  4455667799999999


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccC----------cc
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE----------DQ  267 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~----------~p  267 (311)
                      .++ ++.++.++|++.+.+++    ..++.+... .+|++.|+++|.+ ||++|++++||++|+. +.          .+
T Consensus       135 ~~~-~~~~d~~~l~~~l~~~~----~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~-~~~~~~~~~~~~~~  208 (373)
T TIGR03812       135 LDE-DYTVDVKDVEDLIDDNT----IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGG-FVIPFLKKGYNPPP  208 (373)
T ss_pred             eCC-CCCcCHHHHHHHHhhCc----EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchh-HHHHHHhcCCCCCC
Confidence            875 67889999999987642    245554433 6999999999976 6999999999999985 43          25


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      +|+...++|++++|+|| |..+|.|+|++++++
T Consensus       209 ~d~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~  240 (373)
T TIGR03812       209 FDFSLPGVQSITIDPHK-MGLSPIPAGGILFRS  240 (373)
T ss_pred             ccccCCCCCEEEECccc-cCCCcCCceEEEEeC
Confidence            67766689999999999 543388888777643

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.77  E-value=2.4e-17  Score=138.10  Aligned_cols=160  Identities=15%  Similarity=0.049  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ++++|+.++++++++.+  .++|++|+|+|+.+++.++. .+++.++ +..+|+...+ ..++..|+++..++.+. ++.
T Consensus         2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~-~~~   76 (170)
T cd01494           2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDD-AGY   76 (170)
T ss_pred             HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehh-hHHHhcCCEEEEeccCC-CCc
Confidence            46899999999985434  49999999999999999984 4577775 4555553332 34456699999998765 322


Q ss_pred             cCH--HHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---CCCCCCCcEE
Q 021539          207 IKG--SQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---ALALHRPDLV  278 (311)
Q Consensus       207 id~--~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---dl~~l~~Dfl  278 (311)
                      ...  +.+++....    .++.++.+++.  .+|..+|+++|.+ ++++|+++++|++|.. +....   +....++|++
T Consensus        77 ~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~d~~  151 (170)
T cd01494          77 GGLDVAILEELKAK----PNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAG-GASPAPGVLIPEGGADVV  151 (170)
T ss_pred             cchhhhhhhhcccc----CceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccc-ccccccccccccccCCEE
Confidence            222  234333221    23577777655  5899999999976 6999999999999999 87776   6777889999


Q ss_pred             EEccccCcCCCCCceEEEEEe
Q 021539          279 LCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       279 ~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      ++|+|| ++|+ .|+|+|++|
T Consensus       152 ~~s~~K-~~~~-~~~G~l~~~  170 (170)
T cd01494         152 TFSLHK-NLGG-EGGGVVIVK  170 (170)
T ss_pred             EEEccc-ccCC-CceEEEEeC
Confidence            999999 7774 699999986

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.76  E-value=2.5e-18  Score=162.60  Aligned_cols=174  Identities=17%  Similarity=0.018  Sum_probs=125.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-----------CCC--CEEE-EccCcChHHHHH
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-----------FKG--NYYL-TIISEESDYIKG  186 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-----------~~G--d~Il-s~~eh~~~~~~~  186 (311)
                      +......++++++.+++++|++.++..++||+|+|+|+++++.++..           .++  ..|+ +..+|.+  +..
T Consensus        33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~~~  110 (345)
T cd06450          33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS--VEK  110 (345)
T ss_pred             CchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH--HHH
Confidence            34455566789999999999962233599999999999988776421           022  2454 4445553  222


Q ss_pred             HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539          187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                      .++..|.+++.+|.+. ++.++.++|++.+++... ..++.+|++++.  .+|.+.|+++|.+ |+++|+++|+|++|+.
T Consensus       111 ~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~  189 (345)
T cd06450         111 AAAYLDVKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG  189 (345)
T ss_pred             HHHHHhcCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence            2334488999999875 568999999999975100 012456665543  6999999999976 6999999999999999


Q ss_pred             ccCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          263 FGEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       263 ~G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                       +..+++...      .++|++++|+|| ++++|.|+|+++++
T Consensus       190 -~~~~~~~~~~~~~~~~~~d~~~~s~~K-~l~~p~g~g~~~~~  230 (345)
T cd06450         190 -FLLPFPEPRHLDFGIERVDSISVDPHK-YGLVPLGCSAVLVR  230 (345)
T ss_pred             -HHhhChhhHHHhcCccccCEEEEchhH-hhCCCcchHHHHHH
Confidence             887765332      379999999999 55449999988765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.76  E-value=6e-18  Score=172.06  Aligned_cols=175  Identities=15%  Similarity=0.021  Sum_probs=122.8

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCC-----------CCCCeEEEeCCHHHHHHHH---HhcCCCC------------------
Q 021539          121 GNFISIPEIQARNRALKHCGLS-----------EDEYLVLFVPNYKEAMLMI---GESYPFF------------------  168 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~-----------~dey~VvFTsnaTealnlv---~~s~~~~------------------  168 (311)
                      +..++.++.++-.-++++++..           ++...-+||+|+|+|+.+.   ++...+.                  
T Consensus       124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~  203 (522)
T TIGR03799       124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALK  203 (522)
T ss_pred             CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhh
Confidence            3344455567888888888532           2223468999999997653   3221110                  


Q ss_pred             ----CCCEEE-EccCcChHHHHHHHHhCCc---EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc----ccc
Q 021539          169 ----KGNYYL-TIISEESDYIKGFAAQKES---KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV----VNG  236 (311)
Q Consensus       169 ----~Gd~Il-s~~eh~~~~~~~la~~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~----~tG  236 (311)
                          ++..|+ |..+|++  +...++..|.   +++.+|++. ++++|.++|++.+++... ..+++|++.+.    ++|
T Consensus       204 ~~~~~~~~v~~S~~~H~S--~~kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~~-~g~~~~~vvataGtt~tG  279 (522)
T TIGR03799       204 HYGYDGLAILVSERGHYS--LGKAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELAE-QNIKPLAIVGVAGTTETG  279 (522)
T ss_pred             hccCCceEEEECCCchHH--HHHHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHHH-CCCCcEEEEEEecCcCCC
Confidence                112344 5566664  3334444566   788999986 789999999998863211 12345544322    699


Q ss_pred             chhcHHHHHH-HHHCCcEEEecccccCccCcccC-----CCCC-CCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          237 TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-----LALH-RPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       237 ~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-----l~~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      .+.|+++|++ |+++|+++||||||+. +....+     +..+ ++|++++|+|||++| |.|+|+|++|+.
T Consensus       280 aiDpl~eIa~i~~~~g~~lHVDaA~gg-~~~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~  349 (522)
T TIGR03799       280 NIDPLDEMADIAQELGCHFHVDAAWGG-ATLLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDP  349 (522)
T ss_pred             CcCCHHHHHHHHHHcCCeEEEEchhhh-HHHhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCH
Confidence            9999999976 6999999999999998 877766     5654 799999999996666 999999999964

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.75  E-value=1.9e-17  Score=160.62  Aligned_cols=168  Identities=14%  Similarity=0.146  Sum_probs=123.3

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC---------------EEEEccCcChH
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN---------------YYLTIISEESD  182 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd---------------~Ils~~eh~~~  182 (311)
                      .|.+  ....++++++.+|+++|++  +  ++||+|+|+|+++++.++ +.+||               +|+....|..+
T Consensus        39 ~~~~--~~~~~~~~~~~~a~~~g~~--~--~~~~~g~t~al~~al~al-~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~  111 (363)
T TIGR01437        39 NYFE--IKELVNKTGEYIANLLGVE--D--AVIVSSASAGIAQSVAAV-ITRGNRYLVENLHDSKIEVNEVVLPKGHNVD  111 (363)
T ss_pred             cCCC--HHHHHHHHHHHHHHhhCCC--e--EEEEcCHHHHHHHHHHHH-hcCCCcchhhcccccccccceEEEECccchh
Confidence            4543  3455789999999999984  3  899999999999999887 56676               66655554432


Q ss_pred             H---HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEe
Q 021539          183 Y---IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLL  256 (311)
Q Consensus       183 ~---~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlv  256 (311)
                      .   +.......|+++++++.+   +.++++++++++++++    ..++.++  ++.+|.++|+++|.+ ||++|+++++
T Consensus       112 ~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t----~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~viv  184 (363)
T TIGR01437       112 YGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKT----AAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIV  184 (363)
T ss_pred             cCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhc----eEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEE
Confidence            1   233345568898888764   3589999999998763    2233332  346899999999976 6999999999


Q ss_pred             cccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          257 DATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |++|+. .-.  .+..+++|+++||+|||+.| |+ .|+|+.+++.++
T Consensus       185 D~a~~~-~~~--~~~~~g~D~~~~S~~K~l~g-p~-~G~l~~~~~~i~  227 (363)
T TIGR01437       185 DAAAEE-DLQ--KYYRLGADLVIYSGAKAIEG-PT-SGLVLGKKKYIE  227 (363)
T ss_pred             ECCCCC-chH--HHHHcCCCEEEEeCCcccCC-Cc-eEEEEEcHHHHH
Confidence            999985 211  12245799999999996656 98 899887765544

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.74  E-value=8.5e-17  Score=155.71  Aligned_cols=170  Identities=13%  Similarity=0.099  Sum_probs=133.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC-CC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW-LD  204 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~-~~  204 (311)
                      .+.+.|+.+|+++|++  +  +++++|++++++.++.++ ..+|+.|++. .+|.+..  ..++..|+++..+|.+. ++
T Consensus        52 ~~~~~~e~lA~~~g~~--~--~~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s~~--~~~~~~g~~~~~~~~~~~~~  124 (370)
T TIGR02539        52 PIHDFLEDLAEFLGMD--E--ARVTHGAREGKFAVMHAL-CKEGDWVVLDGLAHYTSY--VAAERAGLNVKEVPHTGHPE  124 (370)
T ss_pred             HHHHHHHHHHHHhCCC--c--eEEECChHHHHHHHHHHh-hCCCCEEEECCcccHHHH--HHHHHcCCEEEEEecCCccc
Confidence            4678899999999995  3  667899999999999988 4788998754 5555443  33566799999999753 24


Q ss_pred             cccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539          205 LRIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL  279 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~  279 (311)
                      +.+|.++|++.+++....  ..+++|++++.  .+|.+.|+++|.+ ++++|+++++|++|+. |..++++...++|+++
T Consensus       125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~-g~~~~~~~~~~~di~v  203 (370)
T TIGR02539       125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTV-GRMPVSAKEIGADFIV  203 (370)
T ss_pred             CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECcccc-CCcCCCHHHcCCCEEE
Confidence            678999999988642100  12567777655  5999999999976 6999999999999999 9888888777899999


Q ss_pred             EccccCcCCCCCceEEEEEeCCCCcc
Q 021539          280 CTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       280 ~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      .|+|| ++|.+.++|+++.++++++.
T Consensus       204 ~s~sK-~~~~~g~~G~l~~~~~~i~~  228 (370)
T TIGR02539       204 GSGHK-SMAASGPCGVLGMSEEWEDI  228 (370)
T ss_pred             eeCcc-cccCCCCEEEEEECHHHHhh
Confidence            99999 77645568999998876653

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.74  E-value=5.4e-17  Score=156.80  Aligned_cols=169  Identities=13%  Similarity=0.058  Sum_probs=127.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYLT-IISEESD--YIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~  200 (311)
                      ...++.++.+++++|++.++  ++|+.|++++.+.++.+..+.  +|+.|+. ...|.+.  .+..+.++.|++++.+|.
T Consensus        64 ~~~~~~~~~la~~~g~~~~~--v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~  141 (398)
T cd00613          64 QALFELQTMLCELTGMDVAN--ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPS  141 (398)
T ss_pred             HHHHHHHHHHHHHHCCCccc--eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEecc
Confidence            55679999999999997554  888887776655544433233  4888864 4455532  344333455789999998


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcH-HHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcE
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSM-HWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDL  277 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi-~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Df  277 (311)
                      +. ++.++.++|++.+.++     +++|++.+. .+|.+.|+ ++|.+ |+++|+++++|++|+. |..+.+...+++|+
T Consensus       142 ~~-~~~~d~~~l~~~i~~~-----t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~-~~~~~~~~~~~~d~  214 (398)
T cd00613         142 DE-GGTVDLEALKEEVSEE-----VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLN-LTGLKPPGEYGADI  214 (398)
T ss_pred             CC-CCCcCHHHHHHhcCCC-----eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccc-ccCCCChHHcCCCE
Confidence            64 5678999999988764     567766554 58999996 99966 7999999999999998 88888887889999


Q ss_pred             EEEccccCcCCCC-----CceEEEEEeCCCCcc
Q 021539          278 VLCTLDNNTHAQP-----LKITCLLVRRKSFDT  305 (311)
Q Consensus       278 l~~S~HK~l~G~P-----~GiG~L~vr~~~~~~  305 (311)
                      +++|+|| +++ |     .|+|+|++++++.+.
T Consensus       215 ~~~s~~K-~~~-p~g~Ggp~~g~l~~~~~~~~~  245 (398)
T cd00613         215 VVGNLQK-TGV-PHGGGGPGAGFFAVKKELVRF  245 (398)
T ss_pred             EEeeccc-cCC-CCCCCCCceeEEEEhhhhHhh
Confidence            9999999 553 4     478999999877654

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.69  E-value=2.5e-16  Score=155.72  Aligned_cols=168  Identities=11%  Similarity=0.029  Sum_probs=129.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~  201 (311)
                      ...+.+.++.+++++|++++  ++++|+|+|++++.++.++.+.+|++|+ +..+|.+  ..++.+++..|.+++.+|.+
T Consensus       111 ~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~  188 (447)
T PRK00451        111 LQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE  188 (447)
T ss_pred             HHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence            34455777889999999765  4999999999998888777556788876 4556653  33455566679999999987


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEe--cccccCccCcccCCCCCCCcE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLL--DATGLVFGEDQLALALHRPDL  277 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlv--DAaQsv~G~~pldl~~l~~Df  277 (311)
                      + + .++.++|+++++++     +++|++++. .+|.+.|+++|.+ ||++|+++++  |+. ++ |..+. ..++++|+
T Consensus       189 ~-~-~~d~~~l~~~i~~~-----t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~-g~~~~-~~~~~~D~  258 (447)
T PRK00451        189 D-G-VTDLEALEAAVDDD-----TAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SL-GLLKP-PGEYGADI  258 (447)
T ss_pred             C-C-CCCHHHHHHhcCCC-----eEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-Hh-ccCCC-cccCCCCE
Confidence            5 5 88999999999765     567766544 6999999999976 6999999988  755 55 65543 35679999


Q ss_pred             EEEccccC----cCCCCCceEEEEEeCCCCcc
Q 021539          278 VLCTLDNN----THAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       278 l~~S~HK~----l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +++|+|||    .+|+| |+|++++++++.+.
T Consensus       259 ~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~  289 (447)
T PRK00451        259 VVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQ  289 (447)
T ss_pred             EEECCCcCCCCCCCCCC-CchHHHhhHHHHhh
Confidence            99999994    25657 89999999877665

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.68  E-value=3.1e-16  Score=153.36  Aligned_cols=166  Identities=14%  Similarity=-0.016  Sum_probs=119.3

Q ss_pred             hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HH-HHHHHhCCcEE
Q 021539          121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YI-KGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~-~~la~~~G~~V  195 (311)
                      |......+++ +|+.+++++|++..  .|+|++ +|+|+++++.++ +++||.|+ +..+|...  .+ .......|.++
T Consensus        65 ~~~~~~~~e~~~~~~la~~~g~~~~--~i~~~s-gt~al~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~  140 (416)
T PRK00011         65 GCEYVDVVEQLAIDRAKELFGAEYA--NVQPHS-GSQANAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNV  140 (416)
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCce--eeecCC-chHHHHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeE
Confidence            4444555665 89999999999753  366665 578999999888 68899986 44555421  11 11112346788


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----ccC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----QLA  269 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----pld  269 (311)
                      ..++++..++.+|.++|++++++.    ++++|.+....+|...|+++|.+ |+++|+++++|++|++ |..     +.+
T Consensus       141 ~~~~~~~~~~~~d~~~l~~~i~~~----~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~-g~~~~g~~~~~  215 (416)
T PRK00011        141 VSYGVDEETGLIDYDEVEKLALEH----KPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIA-GLVAAGVHPSP  215 (416)
T ss_pred             eecCcCcccCCcCHHHHHHHHHhc----CCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchh-cccccCccCCC
Confidence            888886445789999999999752    14677665446888899999976 6999999999999988 754     455


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      +.  ++|++++|+|||+.| |.|. +++.+
T Consensus       216 ~~--~~di~~~S~~K~l~g-~~gg-~i~~~  241 (416)
T PRK00011        216 VP--HADVVTTTTHKTLRG-PRGG-LILTN  241 (416)
T ss_pred             CC--CCcEEEecCCcCCCC-CCce-EEEeC
Confidence            55  689999999995545 8764 45543

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.67  E-value=1.6e-15  Score=151.34  Aligned_cols=162  Identities=12%  Similarity=-0.010  Sum_probs=118.8

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|+.   +.|+|++|+ +|+++++.++ +++||+|+ +..+|...  .+....++.|+++.+
T Consensus        64 ~r~~~pt~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~  138 (437)
T PRK05613         64 SRLTNPTVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTF  138 (437)
T ss_pred             eCccChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence            3444555678999999999983   347777776 7887777776 57899987 44565533  233445667999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++ +.    .+.+++++.++++     +++|.+.+.  .+|.++||++|.+ ||++|+++++|++|+. |.. .+..+++
T Consensus       139 vd-~~----~d~e~l~~~l~~~-----tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~-g~~-~~p~~~G  206 (437)
T PRK05613        139 VE-NP----DDPESWQAAVQPN-----TKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIAT-AAL-VRPLELG  206 (437)
T ss_pred             EC-CC----CCHHHHHHhCCcc-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcc-ccc-cChHHhC
Confidence            97 22    1678899999875     455544322  5799999999976 6999999999999998 865 3433578


Q ss_pred             CcEEEEccccCcCCCC-CceEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQP-LKITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P-~GiG~L~vr~  300 (311)
                      +|++++|+|| ++|++ .|+|++++.+
T Consensus       207 aDivv~S~~K-~l~G~gd~~gG~vv~~  232 (437)
T PRK05613        207 ADVVVASLTK-FYTGNGSGLGGVLIDG  232 (437)
T ss_pred             CCEEEeeccc-eecCCCcceeEEEEec
Confidence            9999999999 77733 2568888843

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.66  E-value=1.3e-15  Score=143.26  Aligned_cols=167  Identities=14%  Similarity=0.033  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ..++++++.+|+++|++  + .+++|+|+|+|++.++.++ .++||.|+. ..+|.+. .. .+...|+++++++.+...
T Consensus        59 g~i~~~~~~~A~~~ga~--~-~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s~-~~-~~~~~g~~~~~v~~~~~~  132 (294)
T cd00615          59 GPIKEAQELAARAFGAK--H-TFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKSV-IN-GLVLSGAVPVYLKPERNP  132 (294)
T ss_pred             hHHHHHHHHHHHHhCCC--C-EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHHH-HH-HHHHCCCEEEEecCccCc
Confidence            34679999999999984  2 3555999999999998887 578999874 4455432 22 233458888888765322


Q ss_pred             -----cccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccC----ccCcccCCCCC
Q 021539          205 -----LRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLV----FGEDQLALALH  273 (311)
Q Consensus       205 -----g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv----~G~~pldl~~l  273 (311)
                           +.++.+++++.+++..   .+++|.++.. .+|+++|+++|.+ ||++|+++++|++|+.    .+..+.+....
T Consensus       133 ~~~~~~~i~~~~l~~~l~~~~---~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~  209 (294)
T cd00615         133 YYGIAGGIPPETFKKALIEHP---DAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA  209 (294)
T ss_pred             ccCcCCCCCHHHHHHHHHhCC---CceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence                 3689999999997532   2466666533 6899999999966 6999999999999974    13345555567


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|+++.|+|| ++++|.+.|+|+++++.
T Consensus       210 ~~div~~S~hK-~l~g~~~~~~l~~~~~~  237 (294)
T cd00615         210 GADIVVQSTHK-TLPALTQGSMIHVKGDL  237 (294)
T ss_pred             CCcEEEEchhc-ccchHhHHHHHHhCCCc
Confidence            89999999999 56558888999888763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.64  E-value=1.7e-14  Score=136.63  Aligned_cols=159  Identities=9%  Similarity=-0.029  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.|+.+++++|++  +  ++||+|+|+|++.++.++.+.+|++|++ ..+|++. . ..+...|+++..++++..++
T Consensus        19 ~~~~~~~~la~~~~~~--~--~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~   92 (352)
T cd00616          19 KVREFEKAFAEYLGVK--Y--AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT-A-NAILLLGATPVFVDIDPDTY   92 (352)
T ss_pred             HHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH-H-HHHHHcCCeEEEEecCCCcC
Confidence            4568999999999972  3  8999999999999999887678998864 4455532 2 22345699999999875457


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC-CCCCcEEEEccc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA-LHRPDLVLCTLD  283 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~-~l~~Dfl~~S~H  283 (311)
                      .++.++|++.++++     +++|.+++ .+|...|+++|.+ |+++|+++++|++|++ |....+.. ....|+.++|+|
T Consensus        93 ~~d~~~l~~~i~~~-----~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~-g~~~~~~~~~~~~d~~~~S~~  165 (352)
T cd00616          93 NIDPELIEAAITPR-----TKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQAL-GATYKGRKVGTFGDAGAFSFH  165 (352)
T ss_pred             CcCHHHHHHhcCcC-----CeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCC-CCeECCEEcccCcceeEEcCC
Confidence            78999999988654     56776654 4899999999966 6999999999999999 87654321 112688998866


Q ss_pred             --cCcCCCCCceEEEEEeC
Q 021539          284 --NNTHAQPLKITCLLVRR  300 (311)
Q Consensus       284 --K~l~G~P~GiG~L~vr~  300 (311)
                        | +++.|. .|+++.++
T Consensus       166 ~~K-~~~~~~-gg~~~~~~  182 (352)
T cd00616         166 PTK-NLTTGE-GGAVVTND  182 (352)
T ss_pred             CCC-CCcccC-ceEEEECC
Confidence              9 555343 35555543

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PLN02452 phosphoserine transaminase

Probab=99.64  E-value=1e-15  Score=149.48  Aligned_cols=169  Identities=11%  Similarity=0.024  Sum_probs=125.5

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEE
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V  195 (311)
                      ++........++++|+.+.++++++ ++|.|+|. .|+|.++..+..++- .+|++++ ...+..+..+...+++.|...
T Consensus        44 sHRs~~f~~i~~~~~~~L~~l~~~p-~~y~v~~l~Gsgt~~~ea~~~nl~-~~~~~~l~~~~G~fg~r~~~~a~~~g~~~  121 (365)
T PLN02452         44 SHRGKEFLSIIQKAEADLRELLDIP-DNYEVLFLQGGASTQFAAIPLNLC-KPGDKADFVVTGSWSKKAAKEAKKYCKTN  121 (365)
T ss_pred             CCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEeCccHHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCCc
Confidence            4456666778899999999999984 66888877 799999999998873 4677653 445555665656677777644


Q ss_pred             EEEeCCCCCc---ccCHHHHHhhhhccCCCCCceEEEEecc--cccch-hcHHHHHHHHHCCcEEEecccccCccCcccC
Q 021539          196 IAAPETWLDL---RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR-YSMHWISEAHRNAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       196 ~~vp~~~~~g---~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i-~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld  269 (311)
                      +.....+ ..   ..+.+++    +.+.   ....|.++++  ++|+. .|+.++.     +++++|||+|++ |+.|+|
T Consensus       122 ~~~~~~~-~~~~~~~~~~~~----~~~~---~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~-g~~pid  187 (365)
T PLN02452        122 VIASGKD-EKYTKIPSVSEW----ELTP---DAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNF-LSKPVD  187 (365)
T ss_pred             EEEecCC-CCCCCCCChHHc----CCCC---CCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCccc-cCcccC
Confidence            4432222 22   3445443    2111   2467888887  58995 8887774     389999999999 999999


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      ++++++||  +|+|| ++| |.|+|++++|+++++..
T Consensus       188 v~~~~v~~--~saqK-~lG-P~Gl~~v~vr~~~l~~~  220 (365)
T PLN02452        188 VSKYGVIY--AGAQK-NVG-PSGVTIVIIRKDLIGNA  220 (365)
T ss_pred             HHHcCEEE--Eeccc-ccC-CCCeEEEEEcHHHHhhc
Confidence            99999888  69999 889 99999999999887653

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.64  E-value=6.6e-15  Score=143.87  Aligned_cols=156  Identities=13%  Similarity=0.023  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..++.++.+|+++|++  .  ++++++++.|+++++. + +++||+|++ ...|...  .+..++++.|+++.+++..  
T Consensus        48 ~~~~le~~la~l~g~~--~--~l~~~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--  119 (378)
T TIGR01329        48 TRTALESLLAKLDKAD--R--AFAFSSGMAALDVITR-L-LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT--  119 (378)
T ss_pred             HHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHH-H-hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence            3568899999999983  2  4455555679998776 3 578999874 4455422  2445566789999988763  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                          +.+++++.++++     +++|.+...  .+|.+.|+++|.+ ||++|+++++|++|+. +.....+ .+++|++++
T Consensus       120 ----d~~~le~~i~~~-----tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~-~~~~~~l-~~g~Di~v~  188 (378)
T TIGR01329       120 ----DLDKVKAALGPK-----TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS-PLLCNPL-ELGADIVYH  188 (378)
T ss_pred             ----CHHHHHHhcCcC-----ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcCCcEEEE
Confidence                578888888754     567776544  5999999999966 6999999999999988 7665555 458999999


Q ss_pred             ccccCcCCCCCc--eEEEEEeCCC
Q 021539          281 TLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       281 S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      |+|||+.| |.|  .|+++++++.
T Consensus       189 S~tK~l~G-~~~~~~G~v~~~~~~  211 (378)
T TIGR01329       189 SATKFLAG-HSDVMAGVLAVKGEE  211 (378)
T ss_pred             ecceeccC-CccceeEEEEeCcHH
Confidence            99995555 877  8888887643

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.64  E-value=3.1e-15  Score=150.56  Aligned_cols=168  Identities=13%  Similarity=0.019  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH--HHhcCCCCCCC----EEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLM--IGESYPFFKGN----YYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnl--v~~s~~~~~Gd----~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ..+++.++.+++++|++..  .+.-++|+++.+..  +++.+...+|+    +|+ +..+|+...  ..++..|++++.+
T Consensus       113 el~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv~v  188 (481)
T PRK04366        113 ELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNP--ASAAMAGFKVVEI  188 (481)
T ss_pred             HHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHH--HHHHHcCCEEEEe
Confidence            4457899999999999621  23223444444332  23333334454    665 556665432  2345579999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch-hcHHHHHH-HHHCCcEEEecccccCccCc-ccCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR-YSMHWISE-AHRNAWHVLLDATGLVFGED-QLALALHR  274 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i-~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pldl~~l~  274 (311)
                      |.+. ++.+|.++|+++++++     +++|.++.- .+|.+ .|+++|.+ ||++|++++||++|++ +.. .++..+++
T Consensus       189 ~~~~-~~~~D~e~L~~~i~~~-----t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~-~~~g~~~~~~~G  261 (481)
T PRK04366        189 PSNE-DGLVDLEALKAAVGED-----TAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLN-AILGKARPGDMG  261 (481)
T ss_pred             ecCC-CCCcCHHHHHhhcccC-----CeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChh-hhcccCCccccC
Confidence            9875 6889999999998765     456555433 68987 68999966 6999999999999997 633 46778899


Q ss_pred             CcEEEEccccCcCCCC-----CceEEEEEeCCCCcc
Q 021539          275 PDLVLCTLDNNTHAQP-----LKITCLLVRRKSFDT  305 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P-----~GiG~L~vr~~~~~~  305 (311)
                      +|++++++|| ++|.|     .|+|+|+++++..+.
T Consensus       262 aD~~~~~~hK-~l~~P~g~Ggp~~G~l~~~~~~~~~  296 (481)
T PRK04366        262 FDVVHLNLHK-TFSTPHGGGGPGSGPVGVKEELAPF  296 (481)
T ss_pred             CCEEEEechh-hcCCCCCCCCCCeeeeeehhhhHhh
Confidence            9999999999 55435     467899999876654

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.64  E-value=4.5e-15  Score=146.47  Aligned_cols=162  Identities=9%  Similarity=0.013  Sum_probs=124.0

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      +|....-.+...++||++-|+.  .  .++++|++.|++.++.++ +++||+|++. ..|..  ..++..+++.|++|.+
T Consensus        57 sR~~nPt~~~le~~la~LEg~~--~--a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~  131 (395)
T PRK08114         57 GRRGTLTHFSLQEAMCELEGGA--G--CALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTW  131 (395)
T ss_pred             cCCCChhHHHHHHHHHHHhCCC--e--EEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEE
Confidence            4444444556777799998873  2  667777999999988887 6899998754 34431  2233445678999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ++..      +.++++++++++     ++||.+.+.  .+|.+.||++|++ ||++  |++++||++|+. |.. ++..+
T Consensus       132 vd~~------d~~~l~~~l~~~-----TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~-p~~-~~pl~  198 (395)
T PRK08114        132 FDPL------IGADIAKLIQPN-----TKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAA-GVL-FKALD  198 (395)
T ss_pred             ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcc-ccc-cCHHH
Confidence            8642      457888998765     688888655  5899999999976 6887  599999999999 977 99999


Q ss_pred             CCCcEEEEccccCcCCCCC--ceEEEEEeCC
Q 021539          273 HRPDLVLCTLDNNTHAQPL--KITCLLVRRK  301 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~--GiG~L~vr~~  301 (311)
                      +++||++.|+|||+.| |.  +.|+++.+++
T Consensus       199 ~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~  228 (395)
T PRK08114        199 FGIDISIQAGTKYLVG-HSDAMIGTAVANAR  228 (395)
T ss_pred             cCCcEEEEcCcccccC-CCcceeEEEEcCHH
Confidence            9999999999996666 85  7787776654

>PLN02271 serine hydroxymethyltransferase

Probab=99.64  E-value=6.9e-15  Score=149.80  Aligned_cols=168  Identities=12%  Similarity=0.048  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCC--eEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHH-------HHHHhCCcEEE
Q 021539          127 PEIQARNRALKHCGLSEDEY--LVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIK-------GFAAQKESKVI  196 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey--~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~-------~la~~~G~~V~  196 (311)
                      .+.-|.+++.++||++.+++  +|-- -+++.|+..+..++ +++||.|++ ..+|-.+...       ..+...|..+.
T Consensus       195 iE~la~era~~lF~~~~~~~gaNVQp-~SGs~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~  272 (586)
T PLN02271        195 IERLCCERALAAFGLDSEKWGVNVQP-YSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFE  272 (586)
T ss_pred             HHHHHHHHHHHHhCCcccccccceee-ccHHHHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEE
Confidence            33479999999999876432  2332 37888999999888 799999985 4443322111       11233466666


Q ss_pred             EEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--
Q 021539          197 AAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA--  271 (311)
Q Consensus       197 ~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~--  271 (311)
                      .+|  ++..+|.||.++|++.....    +++||.+.+...=...|+++|.+ |+++|+++++|++|.+ |.+..++-  
T Consensus       273 ~vpY~~d~~~g~IDyd~lek~a~~~----rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~a-GLIa~g~~~s  347 (586)
T PLN02271        273 SLPYKVNPQTGYIDYDKLEEKALDF----RPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHIS-GLVAAKECVN  347 (586)
T ss_pred             EEEcccccccCccCHHHHHHHhhhc----CCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccc-cccccCcCCC
Confidence            666  65557899999999844332    26798887664347889999977 6999999999999999 99977743  


Q ss_pred             -CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          272 -LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       272 -~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                       ...+|++++|+|||+.| |.| |++++|++..
T Consensus       348 P~~~aDvvt~TTHKtLrG-PrG-G~I~~r~~~~  378 (586)
T PLN02271        348 PFDYCDIVTSTTHKSLRG-PRG-GIIFYRKGPK  378 (586)
T ss_pred             CCcCCcEEEeCCcccCCC-CCc-eEEEeccccc
Confidence             23689999999997777 999 8888887643

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.63  E-value=1.6e-14  Score=140.77  Aligned_cols=175  Identities=11%  Similarity=0.033  Sum_probs=129.0

Q ss_pred             cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHH
Q 021539          105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDY  183 (311)
Q Consensus       105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~  183 (311)
                      +-..+.+.+.....+.|..    ..+.++++|+++|++  .  +++|+|+|+|+++++.++.+.+||+|++ ...|... 
T Consensus        16 e~~~~~~~l~~~~~~~g~~----~~~le~~la~~~g~~--~--~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~-   86 (379)
T PRK11658         16 ELAAVKEVLRSGWITTGPK----NQALEQAFCQLTGNQ--H--AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST-   86 (379)
T ss_pred             HHHHHHHHHHcCCccCCHh----HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH-
Confidence            4455666664433333443    458899999999984  3  8899999999999999987789999874 4444432 


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                      . ..+...|++++.++++..+..+|.++++++++++     +++|...+ .+|...|+++|.+ |+++|+++++|++|++
T Consensus        87 ~-~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~-----tkav~~~~-~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~  159 (379)
T PRK11658         87 L-NMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPR-----TKAIIPVH-YAGAPADLDAIRAIGERYGIPVIEDAAHAV  159 (379)
T ss_pred             H-HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccC-----CeEEEEeC-CCCCcCCHHHHHHHHHHcCCeEEEECCCcc
Confidence            1 2334569999999987645568999999999765     45665333 5999999999966 6999999999999999


Q ss_pred             ccCccc--CCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          263 FGEDQL--ALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       263 ~G~~pl--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                       |....  ++...+.|+++|+.+| .+.+  |-|++++.
T Consensus       160 -g~~~~~~~~g~~g~~~~Sf~~~K-~l~~--g~GG~v~~  194 (379)
T PRK11658        160 -GTYYKGRHIGARGTAIFSFHAIK-NITC--AEGGLVVT  194 (379)
T ss_pred             -CCeECCeecCCCCCEEEeCCCCC-cCcc--cCceEEEE
Confidence             87654  3666778999999999 4432  45555554

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.63  E-value=4.5e-15  Score=143.99  Aligned_cols=167  Identities=16%  Similarity=-0.019  Sum_probs=117.2

Q ss_pred             hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--H-HHHHHhCCcEE
Q 021539          121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--I-KGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~-~~la~~~G~~V  195 (311)
                      |......+++ +|+.+++++|++..  .|++| |+|+|+++++.++ +++||+|+ ...+|....  + ...++..|.++
T Consensus        59 ~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~-sgt~a~~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~  134 (402)
T cd00378          59 GCEYVDEIEDLAIERAKKLFGAEYA--NVQPH-SGSQANLAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLF  134 (402)
T ss_pred             CchHHHHHHHHHHHHHHHHhCCCce--eeecC-CcHHHHHHHHHHh-cCCCCEEEEecCccCccccccccccccccceeE
Confidence            4444455555 78899999999643  35556 4689999999988 68999986 444544221  1 11134458877


Q ss_pred             EEEeCCCC--CcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----c
Q 021539          196 IAAPETWL--DLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----Q  267 (311)
Q Consensus       196 ~~vp~~~~--~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----p  267 (311)
                      ..++++.+  ++.+|.+++++.++..    +++++.+....+|+..|+++|.+ ||++|+++++|++|+. |..     +
T Consensus       135 ~~~~~~~~~~~~~id~~~l~~~i~~~----~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~-g~~~~g~~~  209 (402)
T cd00378         135 ESVPYGVDPETGLIDYDALEKMALEF----KPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVA-GLVAGGVFP  209 (402)
T ss_pred             EEecCCcCcccCCcCHHHHHHHHHhC----CCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchh-hhhhcccCC
Confidence            77776543  5789999999988642    14566655446899999999976 6999999999999987 753     3


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      .++.  ++|++++|+|||+.| |.|.++++.+
T Consensus       210 ~~~~--~~dv~~~s~sK~l~G-~~gg~i~~~~  238 (402)
T cd00378         210 NPLP--GADVVTTTTHKTLRG-PRGGLILTRK  238 (402)
T ss_pred             Cccc--CCcEEEeccccCCCC-CCceEEEecc
Confidence            4444  689999999995435 8765554433

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.62  E-value=1.1e-14  Score=140.97  Aligned_cols=165  Identities=12%  Similarity=-0.013  Sum_probs=112.8

Q ss_pred             chhh----hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcE
Q 021539          120 KGNF----ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESK  194 (311)
Q Consensus       120 ~G~~----~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~  194 (311)
                      .|++    .....+++|+++|+++|++ +  .++||+|++. +..++..+ .++|+.|++ ..+|. ..+..+....+..
T Consensus        46 ~gs~~~~g~~~~~~~~e~~la~~~~~~-~--~l~~~sG~~a-~~~~~~~~-~~~~d~ii~d~~~H~-sv~~~~~~~~~~~  119 (370)
T PRK05937         46 GGSRAILGPSSLLDDLEHKIAHFHGAP-E--AFIVPSGYMA-NLGLCAHL-SSVTDYVLWDEQVHI-SVVYSLSVISGWH  119 (370)
T ss_pred             CCcCcccCChHHHHHHHHHHHHHhCCC-e--EEEECChHHH-HHHHHHHh-CCCCCEEEEEhhhhH-HHHHHHHHcCCce
Confidence            3666    6677899999999999994 2  3888888854 33333333 246778775 55554 3333222222444


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +.+ +      ..|.++|++.++...+. ..+.+|+++++  .+|.++|+++|.+ |+++|++++||++|++ |+.+.+.
T Consensus       120 ~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~-G~~g~~g  191 (370)
T PRK05937        120 QSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAM-GIFGDDG  191 (370)
T ss_pred             EEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCC
Confidence            332 2      24678888888742110 12457766655  5999999999966 6999999999999999 9988886


Q ss_pred             C----CCC---CcEEEEccccCcCCCCCceEEEEEeC
Q 021539          271 A----LHR---PDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       271 ~----~l~---~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      .    .++   .|.+.+|++| .+| |.|.|+|+.++
T Consensus       192 ~g~~~~~~~~~~~~~~~tlsK-~~g-~~G~~vl~~~~  226 (370)
T PRK05937        192 KGFCHSLGYENFYAVLVTYSK-ALG-SMGAALLSSSE  226 (370)
T ss_pred             CchHHhhCCCCCcEEEEechh-hhh-cCceEEEcCHH
Confidence            3    222   2356788889 999 89999998754

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.62  E-value=1.5e-14  Score=145.10  Aligned_cols=162  Identities=15%  Similarity=0.119  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC----hHHHHHHHHhCCcEEEEEeC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE----SDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~----~~~~~~la~~~G~~V~~vp~  200 (311)
                      ...+.+++.+++++|+..    .++++|++.|+++++.+  +.+|++|+... +|.    +..+....+..|+++..++.
T Consensus       122 ~r~~~le~~lA~l~gae~----alvv~sg~aAi~l~l~~--l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~  195 (454)
T TIGR00474       122 SRYSHVEGLLCELTGAED----ALVVNNNAAAVLLALNT--LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT  195 (454)
T ss_pred             hHHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHH--hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC
Confidence            346789999999999952    34567778899988865  46899987544 432    22233345667999988876


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--c--cc--chhcHHHHHH-HHHCCcEEEecccc---------cCcc
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V--NG--TRYSMHWISE-AHRNAWHVLLDATG---------LVFG  264 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~--tG--~i~Pi~~I~~-a~~~g~~vlvDAaQ---------sv~G  264 (311)
                      +   ...+.++++++++++     |++|.+.+.  .  .|  .+.|+++|.+ ||++|+++++|++.         .+ +
T Consensus       196 ~---~~~~l~dle~aI~~~-----T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl-~  266 (454)
T TIGR00474       196 T---NRTHLKDYEDAITEN-----TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGL-P  266 (454)
T ss_pred             C---CCCCHHHHHHhcCcC-----CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccC-C
Confidence            4   234788899999865     567666554  2  57  4899999966 79999999999872         33 3


Q ss_pred             Cccc--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          265 EDQL--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       265 ~~pl--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +.|.  ++.++++|+++||+|| ++|+| ..|+++.+++.++
T Consensus       267 ~~p~~~~~~~~GaDiv~fSg~K-~LgGp-~~G~i~g~~~~i~  306 (454)
T TIGR00474       267 DEPTVQEVIAAGVDLVTFSGDK-LLGGP-QAGIIVGKKELIE  306 (454)
T ss_pred             CCcccccHhHcCCCEEEecCcc-ccCCC-eEEEEEECHHHHH
Confidence            4443  5556899999999999 66558 4899999987654

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.61  E-value=2.3e-14  Score=138.96  Aligned_cols=152  Identities=13%  Similarity=0.036  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .++.|+.+|+++|++   + .++++|+|+|+++++.++.+++||.|++ ..++..  ....+...|+++++++++..++.
T Consensus        31 ~~~le~~la~~~g~~---~-~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~~  104 (380)
T TIGR03588        31 VPAFEEALAEYVGAK---Y-AVAFNSATSALHIACLALGVGPGDRVWTTPITFVA--TANCALYCGAKVDFVDIDPDTGN  104 (380)
T ss_pred             HHHHHHHHHHHHCCC---e-EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH--HHHHHHHcCCEEEEEecCCCcCC
Confidence            457899999999984   2 4555689999999999987789999864 444432  12334567999999998654667


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC----cEEEEc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP----DLVLCT  281 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~----Dfl~~S  281 (311)
                      ++.+++++.+++. +..++++|.+.+ .+|...|+++|.+ |+++|+++++|++|++ |.. ++...++.    |+.++|
T Consensus       105 ~d~~~l~~~i~~~-~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~-g~~-~~~~~~g~~~~~d~~~~S  180 (380)
T TIGR03588       105 IDEDALEKKLAAA-KGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHAL-GAE-YGGKPVGNCRYADATVFS  180 (380)
T ss_pred             cCHHHHHHHhhcc-cCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcc-cCc-cCCEeCCCccccceEEEe
Confidence            8999999999731 001246665544 4899999999966 6999999999999999 975 66666666    999999


Q ss_pred             cc--cCcCCCC
Q 021539          282 LD--NNTHAQP  290 (311)
Q Consensus       282 ~H--K~l~G~P  290 (311)
                      +|  | +++.|
T Consensus       181 ~~~~K-~~~~~  190 (380)
T TIGR03588       181 FHPVK-IITTA  190 (380)
T ss_pred             cCCCC-ccccc
Confidence            99  8 55534

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK04311 selenocysteine synthase; Provisional

Probab=99.60  E-value=1.9e-14  Score=144.64  Aligned_cols=162  Identities=14%  Similarity=0.112  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcC----hHHHHHHHHhCCcEEEEEeC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEE----SDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~----~~~~~~la~~~G~~V~~vp~  200 (311)
                      ...+.+++.+|+++|+.  .  .++++|+|.|+++++.++  .+|++|+.. .+|.    +..+....++.|+++.+++.
T Consensus       127 ~r~~~~e~~lA~l~Gae--~--a~vv~sgtaAl~l~l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~  200 (464)
T PRK04311        127 SRDRALAALLCALTGAE--D--ALVVNNNAAAVLLALNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGT  200 (464)
T ss_pred             hHHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECC
Confidence            44678999999999984  2  677888889999988765  688988644 3443    12233345667999988876


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEeccc----cc--chhcHHHHHH-HHHCCcEEEecccccCc--------cC
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVV----NG--TRYSMHWISE-AHRNAWHVLLDATGLVF--------GE  265 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~----tG--~i~Pi~~I~~-a~~~g~~vlvDAaQsv~--------G~  265 (311)
                      +   ...+.++++++++++     |++|.+.+.+    +|  ...|+++|.+ ||++|+++++|+++.+.        ++
T Consensus       201 ~---~~t~~~dle~aI~~~-----TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~  272 (464)
T PRK04311        201 T---NRTHLRDYEQAINEN-----TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD  272 (464)
T ss_pred             C---CCCCHHHHHHhcCcc-----CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence            4   235788899999865     5677665542    45  5689999966 79999999999954221        22


Q ss_pred             cccCCC---CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          266 DQLALA---LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       266 ~pldl~---~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .| ++.   ++++|+++||+|| ++|+| ..|+++.+++.++
T Consensus       273 ~p-~~~~~l~~GaDiv~fSg~K-~LgGp-~~G~i~g~~~li~  311 (464)
T PRK04311        273 EP-TVQELLAAGVDLVTFSGDK-LLGGP-QAGIIVGKKELIA  311 (464)
T ss_pred             CC-chhhHHhcCCcEEEecCcc-cccCC-ceEEEEEcHHHHH
Confidence            33 333   3799999999999 66658 5899999987654

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.59  E-value=4.2e-14  Score=142.57  Aligned_cols=174  Identities=12%  Similarity=-0.010  Sum_probs=120.5

Q ss_pred             chhhhhHHHH-HHHHHHHHHcCCCCCCCeEEE---eCCHHHHHHHHHhcCCCCCCCEEEE-cc---CcChHHH-HHHH--
Q 021539          120 KGNFISIPEI-QARNRALKHCGLSEDEYLVLF---VPNYKEAMLMIGESYPFFKGNYYLT-II---SEESDYI-KGFA--  188 (311)
Q Consensus       120 ~G~~~~~~le-~aR~~IA~~Lga~~dey~VvF---TsnaTealnlv~~s~~~~~Gd~Ils-~~---eh~~~~~-~~la--  188 (311)
                      .|......+| -++++.+++|++..+.  +.|   ..+++.|+..+..++ +++||.|++ ..   +|.+... ..-.  
T Consensus        73 ~G~~~~d~lE~~~~~~~~~~f~~~~~~--~~~nv~~~SG~~AN~av~~aL-~~pgD~Il~~d~~~gGhl~H~~~~~g~~~  149 (475)
T PLN03226         73 GGNEYIDQIETLCQKRALEAFRLDPEK--WGVNVQPLSGSPANFAVYTAL-LQPHDRIMGLDLPHGGHLSHGYQTDGKKI  149 (475)
T ss_pred             CCChhHHHHHHHHHHHHHHHhCCCcce--eEEecCcCchHHHHHHHHHHh-CCCCCEEEECCCCcCcchhhhhhhccccc
Confidence            3555555555 5899999999997554  545   357777888888887 579999986 22   2222221 1100  


Q ss_pred             HhCCcEEEEEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccC
Q 021539          189 AQKESKVIAAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE  265 (311)
Q Consensus       189 ~~~G~~V~~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~  265 (311)
                      ...+..+..++  .+..++.+|.++|++.+...    +++++.+....+|...|+++|.+ |+++|+++++|++|++ |.
T Consensus       150 s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~----~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~-Gl  224 (475)
T PLN03226        150 SATSIYFESMPYRLDESTGLIDYDKLEKKAMLF----RPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHIS-GL  224 (475)
T ss_pred             ccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc----CCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhh-Cc
Confidence            11122223333  34447899999999988742    13465543335899999999976 6999999999999999 99


Q ss_pred             cccCCCC---CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          266 DQLALAL---HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       266 ~pldl~~---l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ...++..   ..+||+++++|||+.| |.| |+++.+++..
T Consensus       225 i~~~~~~~p~~~~Div~~t~hK~L~G-P~G-g~I~~~~~~~  263 (475)
T PLN03226        225 VAAQEAASPFEYCDVVTTTTHKSLRG-PRG-GMIFFRKGPK  263 (475)
T ss_pred             ccCCCCCCCCCCCeEEEecCcccccC-CCc-eEEEEchhhc
Confidence            9877543   2699999999995557 999 8888887644

>PLN02880 tyrosine decarboxylase

Probab=99.58  E-value=4.9e-14  Score=142.51  Aligned_cols=192  Identities=11%  Similarity=-0.054  Sum_probs=126.3

Q ss_pred             cchhHHHHhc---CCC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCCC-----CeEEEeCCHHHHHHHHHhcC--------
Q 021539          105 EPSRLLDILS---KKT--SFK-GNFISIPEIQARNRALKHCGLSEDE-----YLVLFVPNYKEAMLMIGESY--------  165 (311)
Q Consensus       105 ~~~~l~~~l~---~~s--s~~-G~~~~~~le~aR~~IA~~Lga~~de-----y~VvFTsnaTealnlv~~s~--------  165 (311)
                      .++-+-|++.   |..  ++. +..++..+.++-+-+++++|.+.+.     ..-+||+|+|+|+.+.+..-        
T Consensus        95 ~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~  174 (490)
T PLN02880         95 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKV  174 (490)
T ss_pred             HHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHh
Confidence            4455666663   222  332 4445566678999999999997531     13689999999975533211        


Q ss_pred             CCCC-CCEE-E-EccCcChHHHHHHHHhCCc---EEEEEeCCC-CCcccCHHHHHhhhhccCCCC-CceEEEEecc--cc
Q 021539          166 PFFK-GNYY-L-TIISEESDYIKGFAAQKES---KVIAAPETW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPVV--VN  235 (311)
Q Consensus       166 ~~~~-Gd~I-l-s~~eh~~~~~~~la~~~G~---~V~~vp~~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~~--~t  235 (311)
                      .+.. ..-+ + |...|.  ++...+.-.|.   .|+.||++. .+++++.+.|++.+++..+.. ..-+|+.++-  .+
T Consensus       175 g~~~~~~~vv~~S~~aH~--Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~  252 (490)
T PLN02880        175 GKNALEKLVVYASDQTHS--ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS  252 (490)
T ss_pred             cccccCCeEEEEcCCchH--HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence            1110 1223 3 333333  24344444566   478899874 256899999999997532111 1223333332  59


Q ss_pred             cchhcHHHHHH-HHHCCcEEEecccccCccCccc-----CCCC-CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          236 GTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL-----ALAL-HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       236 G~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl-----dl~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      |.+-|+++|++ |+++|+++|||||++. +....     .+.. .++|++++++|||++. |.|+|+|++|+
T Consensus       253 GaiDpl~eI~~i~~~~~iwlHVDaA~gg-~~~~~~~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llvr~  322 (490)
T PLN02880        253 TAVDPLLELGKIAKSNGMWFHVDAAYAG-SACICPEYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWVKD  322 (490)
T ss_pred             cccCcHHHHHHHHHHcCCEEEEehhhHH-HHHhCHHHHHHhcCchhcCEEEECchhhcCC-CccEEEEEEeC
Confidence            99999999976 6999999999999998 75543     2444 4799999999995555 99999999995

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.58  E-value=2e-14  Score=155.01  Aligned_cols=180  Identities=16%  Similarity=0.103  Sum_probs=132.4

Q ss_pred             chhHHHHhcCC---CCcchhhh------hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC--CEEE
Q 021539          106 PSRLLDILSKK---TSFKGNFI------SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG--NYYL  174 (311)
Q Consensus       106 ~~~l~~~l~~~---ss~~G~~~------~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G--d~Il  174 (311)
                      +.-+..++.++   ++|+..+.      .+.+.+.|..|++++|+++++  +.|+.|+|++.+.++.++.+.+|  ++|+
T Consensus       119 ~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~an--aSL~d~aTAaaea~~~a~~~~~g~~~~Vl  196 (993)
T PLN02414        119 PVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSN--ASLLDEGTAAAEAMAMCNNILKGKKKKFL  196 (993)
T ss_pred             HHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhh--EeecCChHHHHHHHHHHHhcccCCCCEEE
Confidence            33335555555   56654442      233579999999999998776  99999999999999888877754  6675


Q ss_pred             -EccCcChH--HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HH
Q 021539          175 -TIISEESD--YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AH  248 (311)
Q Consensus       175 -s~~eh~~~--~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~  248 (311)
                       +..+|+.+  .++..++..|++|+.+|.+..+          ...+.     +. .++.+.  .+|.+.|+++|.+ ||
T Consensus       197 Vs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----------~~~~~-----v~-~vlvq~P~~~G~v~dv~~I~~~ah  260 (993)
T PLN02414        197 IASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----------YSSGD-----VC-GVLVQYPATDGEVLDYAEFVKNAH  260 (993)
T ss_pred             EcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----------cccCc-----eE-EEEEecCCCCeEEcCHHHHHHHHH
Confidence             66677743  4677778889999999874211          01111     11 112223  5999999999965 79


Q ss_pred             HCCcEEEecccccCccCccc-CCCCCCCcEEEEccccCcC-----CCCCceEEEEEeCCCCcccCC
Q 021539          249 RNAWHVLLDATGLVFGEDQL-ALALHRPDLVLCTLDNNTH-----AQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       249 ~~g~~vlvDAaQsv~G~~pl-dl~~l~~Dfl~~S~HK~l~-----G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      ++|++++| |+|++ +..++ +..++++||+++++|| |.     |+|. +|+||+|++.... .|
T Consensus       261 ~~GaL~iV-aad~l-al~~l~~pge~GADi~vgsgqK-wg~P~G~GGP~-aGflavr~~~~r~-~P  321 (993)
T PLN02414        261 ANGVKVVM-ATDLL-ALTMLKPPGEWGADIVVGSAQR-FGVPMGYGGPH-AAFLATSQEYKRL-MP  321 (993)
T ss_pred             HcCCEEEE-EECHH-HhcCCCCHhhccCcEEEECCCc-cccCCCCCCCC-eeEEEECHHHHhh-CC
Confidence            99999999 99999 99999 5999999999999999 54     4453 9999999987553 55

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.58  E-value=1.7e-14  Score=155.51  Aligned_cols=156  Identities=12%  Similarity=0.010  Sum_probs=122.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC--CEEE-EccCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG--NYYL-TIISEESD--YIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G--d~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.+.|.-+++++|++..+  +.|+.|+|++.+.++.++.++++  ++|+ +..+|+.+  .|+..++..|++|+.+|.+.
T Consensus       123 l~~~Qt~la~LtG~~~an--aSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~  200 (954)
T PRK05367        123 LLNFQTMVADLTGLEIAN--ASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK  200 (954)
T ss_pred             HHHHHHHHHHHHCCChhh--ccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc
Confidence            458999999999998765  99999999999999888888764  7775 66677743  46677788899999998753


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL  279 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~  279 (311)
                       +.  +        .++     +..+ +.+.  .+|.+.|+++|.+ +|++|++++|||.|.. .....+..++++||++
T Consensus       201 -d~--~--------~~~-----~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~A-l~~l~~pge~GaDi~v  262 (954)
T PRK05367        201 -AL--D--------HDD-----VFGV-LLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLA-LTLLTPPGEMGADIAV  262 (954)
T ss_pred             -CC--C--------ccc-----EEEE-EEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhh-ccCCCChhhcCCCEEE
Confidence             21  1        111     2222 2233  6999999999965 7999999999998855 4455578999999999


Q ss_pred             EccccCc-----CCCCCceEEEEEeCCCCcc
Q 021539          280 CTLDNNT-----HAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       280 ~S~HK~l-----~G~P~GiG~L~vr~~~~~~  305 (311)
                      +|+|| |     ||+| |+|+|++|++....
T Consensus       263 gs~qk-fg~P~g~GGP-~aGflavr~~~~r~  291 (954)
T PRK05367        263 GSAQR-FGVPMGFGGP-HAAYFAVRDAYKRS  291 (954)
T ss_pred             eeCcc-cCCCCCCCCC-CEEEEEECHHHHhh
Confidence            99999 6     6768 89999999876655

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.56  E-value=7e-14  Score=132.66  Aligned_cols=191  Identities=8%  Similarity=0.041  Sum_probs=150.4

Q ss_pred             cchhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH
Q 021539          105 EPSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD  182 (311)
Q Consensus       105 ~~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~  182 (311)
                      .+.++.+.+.+++ .+.-...-+..++.++-+-..|.... .+..+|..++|-|+..++-.+ +.+||.+++ ..+--+.
T Consensus        28 l~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~G~wg~  105 (385)
T KOG2862|consen   28 LSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVSTGTWGQ  105 (385)
T ss_pred             CCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEechHHH
Confidence            4446777776654 44445555667889999999898764 367888888899998877766 468999863 3332234


Q ss_pred             HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHH-HH-HHHCCcEEEecc
Q 021539          183 YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWI-SE-AHRNAWHVLLDA  258 (311)
Q Consensus       183 ~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I-~~-a~~~g~~vlvDA  258 (311)
                      .+...+++.|++|..++.++ +.-+.++.+.+.|..+    +.++|+++|.  +||+.||+.++ .+ ||+++++++||+
T Consensus       106 ra~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh----~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~  180 (385)
T KOG2862|consen  106 RAADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQH----KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDT  180 (385)
T ss_pred             HHHHHHHhhCceeeEEecCc-ccCccHHHHHHHHHhc----CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEec
Confidence            44556788899999999887 6778999999999875    3578888877  69999997665 55 699999999999


Q ss_pred             cccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +.++ |-.++-++++++|+..-..+| -+|+|.|++.+-..++..+
T Consensus       181 VaSl-ggt~F~mDewgVDvaytgSQK-aL~aP~GLsiisfS~ka~~  224 (385)
T KOG2862|consen  181 VASL-GGTEFEMDEWGVDVAYTGSQK-ALGAPAGLSIISFSDKALE  224 (385)
T ss_pred             hhhc-CCccceehhhcccEEEecchh-hcCCCCCcceeecCHHHHH
Confidence            9999 999999999999999999999 7777999999877765543

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.56  E-value=1.2e-13  Score=137.87  Aligned_cols=159  Identities=12%  Similarity=-0.010  Sum_probs=119.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~  201 (311)
                      ....++.++++|++.|+.  .  .+++++++.|+..++.++ .++||+|+ +...|..  ..+...+.+.|+++.+++ +
T Consensus        68 ~p~~~~Le~~lA~l~g~~--~--av~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d  141 (436)
T PRK07812         68 NPTQDVVEQRIAALEGGV--A--ALLLASGQAAETFAILNL-AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D  141 (436)
T ss_pred             CchHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence            344567889999999984  2  677888899999888877 57899986 4444442  122333455788888885 2


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                      .    .+.+.++++++++     +++|.+.+.  .+|.+.|+++|.+ ||++|+.++||++|+. |...-.+ ++++|++
T Consensus       142 ~----~d~e~l~~ai~~~-----tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~-~~~~~pl-~~GaDiv  210 (436)
T PRK07812        142 P----DDLDAWRAAVRPN-----TKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIAT-PYLIRPL-EHGADIV  210 (436)
T ss_pred             C----CCHHHHHHhCCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcCCCEE
Confidence            2    2678888888764     567776554  5899999999976 6999999999999998 7665555 4799999


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +.|+|| ++|++ |  +|++++..+.
T Consensus       211 v~S~tK-~lgg~-G~~i~G~vv~~~~  234 (436)
T PRK07812        211 VHSATK-YLGGH-GTAIAGVIVDGGT  234 (436)
T ss_pred             EEeccc-ccCCC-CCeEEEEEEcCCc
Confidence            999999 77734 5  8888886543

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.55  E-value=2.5e-14  Score=140.32  Aligned_cols=169  Identities=12%  Similarity=0.047  Sum_probs=133.0

Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeE-EEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHH-HHHHhCCc-EE
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLV-LFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIK-GFAAQKES-KV  195 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~V-vFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~-~la~~~G~-~V  195 (311)
                      +..........++++.+.++++.+ ++|.| ++++++|.++..++.++--++|+.++. .+..+..|. +.+++.|+ +|
T Consensus        32 HRs~~F~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv-~g~FG~r~~~eia~~~g~~~v  109 (374)
T TIGR01365        32 HRSKLGKEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSMLGCRGVDVLA-WESFGKGWVTDVTKQLKLPDV  109 (374)
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHcCCCCCCeEEE-ECHHHHHHHHHHHHhcCCCCc
Confidence            556667778889999999999984 45655 558999999999988873246777764 344566665 88888899 58


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      ..+...| +..+++++++.   .+      . |++.|+  +||+++|+++|.... ++++++|||+.++ |..|+|++  
T Consensus       110 ~~l~~~~-g~~~~~~~ve~---~~------~-v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~-g~~~l~~d--  174 (374)
T TIGR01365       110 RVLEAEY-GKLPDLKKVDF---KN------D-VVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAA-FAQDLDYH--  174 (374)
T ss_pred             EEEcCCC-CCCCCHHHcCC---CC------C-EEEecCCCchheecccccccccc-CCCcEEEEccchh-cCCCCChh--
Confidence            8888877 55678887762   11      2 456677  699999998775322 5899999999999 99999998  


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++|+++++.+| .+|.|.|+++++++++.++.
T Consensus       175 ~iDv~~tgsQK-~L~~ppGls~v~vs~~Al~~  205 (374)
T TIGR01365       175 KLDVVTFSWQK-VLGGEGAHGMLILSPRAVAR  205 (374)
T ss_pred             HCcEEEEechh-ccCCCCceEEEEECHHHHHH
Confidence            49999999999 77779999999999988754

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.55  E-value=1.5e-13  Score=134.88  Aligned_cols=160  Identities=13%  Similarity=0.020  Sum_probs=118.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|++  +  +++|+|+++|+..++.++ +++||+|++ ...|..  ..+...++..|+++.+
T Consensus        56 ~r~~~p~~~~le~~la~l~g~~--~--~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~  130 (390)
T PRK08133         56 SRFTNPTVTMFQERLAALEGAE--A--CVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTF  130 (390)
T ss_pred             ECCCChHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence            4445556789999999999984  3  788999999999888877 578999864 444542  2233445667999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.++++++++++     +++|.+..  +.+|.+.|+++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus       131 vd~~------d~~~l~~~i~~~-----tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~-~~~~~pl-~~g  197 (390)
T PRK08133        131 VDLT------DLDAWRAAVRPN-----TKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCT-PALQQPL-KLG  197 (390)
T ss_pred             ECCC------CHHHHHHhcCcC-----CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence            8763      567888888764     56777643  36999999999966 6999999999999876 5433333 357


Q ss_pred             CcEEEEccccCcCCCCCc--eEE-EEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITC-LLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~-L~vr~  300 (311)
                      +|++++|++| ++| +.|  +|. ++.++
T Consensus       198 ~Divv~S~sK-~~~-g~g~~~GG~vv~~~  224 (390)
T PRK08133        198 ADVVIHSATK-YLD-GQGRVLGGAVVGSK  224 (390)
T ss_pred             CcEEEeecce-eec-CCcceEeEEEEcCH
Confidence            8999999999 777 445  544 44443

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.54  E-value=1.6e-13  Score=132.56  Aligned_cols=162  Identities=12%  Similarity=0.063  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ....+.|+.+|+++|++  +  ++.++|+++|++.+..++ +++||+|+ ...+|.+. +. .++..+.+...++     
T Consensus        83 ~~~~~le~~ia~~~g~~--~--~ii~~~~~~a~~~~~~~l-~~~gd~vi~~~~~~~s~-~~-~~~~~~~~~~~~~-----  150 (393)
T TIGR01822        83 DIHKELEAKIAAFLGTE--D--TILYASCFDANGGLFETL-LGAEDAIISDALNHASI-ID-GVRLCKAKRYRYA-----  150 (393)
T ss_pred             HHHHHHHHHHHHHhCCC--c--EEEECchHHHHHHHHHHh-CCCCCEEEEeccccHHH-HH-HHHhcCCceEEeC-----
Confidence            34568999999999983  2  455578899999998887 68999986 44555532 21 1222233332221     


Q ss_pred             cccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCC
Q 021539          205 LRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALA  271 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~  271 (311)
                       .++.++|++.+++..+. .++++|++.++  .+|.+.|+++|.+ |+++|+++++|++|++ |....         ++.
T Consensus       151 -~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~-g~~~~~~~~~~~~~~~~  228 (393)
T TIGR01822       151 -NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT-GFLGPTGRGSHELCGVM  228 (393)
T ss_pred             -CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc-cCcCCCCCchHHhcCCC
Confidence             25778888888752111 13678887765  5999999999966 6999999999999988 76532         232


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                       .++|++++|+|| ++|++ ..|+++.+++..+
T Consensus       229 -~~~di~~~s~sK-~l~g~-r~G~~~~~~~~~~  258 (393)
T TIGR01822       229 -GRVDIITGTLGK-ALGGA-SGGFTTARKEVVE  258 (393)
T ss_pred             -CCCeEEEEEChH-HhhCC-CcEEEEeCHHHHH
Confidence             268999999999 56646 4699888765543

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.54  E-value=3e-13  Score=132.80  Aligned_cols=160  Identities=14%  Similarity=-0.026  Sum_probs=117.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|+. +  .|+| ++++.|+.+++.  .+++||+|+ +..+|..  ..+...+++.|+++.+
T Consensus        49 ~r~~~p~~~~le~~lA~l~g~~-~--~v~~-~sG~~ai~~~l~--~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~  122 (390)
T PRK08064         49 SRSGNPTREALEDIIAELEGGT-K--GFAF-ASGMAAISTAFL--LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF  122 (390)
T ss_pred             cCCCChhHHHHHHHHHHHhCCC-C--eEEE-CCHHHHHHHHHH--HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence            4444455678999999999985 2  3666 555678877665  257899986 4455553  2344556667999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.+++++.++++     +++|.+...  .+|.+.|+++|.+ ||++|+++++|++|+. +.....+ +++
T Consensus       123 v~~~------d~~~l~~~l~~~-----tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~~~-~~g  189 (390)
T PRK08064        123 VDMT------NLEEVAQNIKPN-----TKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLT-PLLQKPL-DLG  189 (390)
T ss_pred             ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCc-ccccCch-hhC
Confidence            8763      467888888765     467766533  5999999999966 6999999999999988 7654344 468


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +|++++|+|| ++++|.|  .|++++++
T Consensus       190 ~Divv~S~tK-~~~G~~~~laG~~v~~~  216 (390)
T PRK08064        190 ADVVLHSATK-FLAGHSDVLAGLAVVKD  216 (390)
T ss_pred             CcEEEeecce-eccCCccceeEEEEeCC
Confidence            9999999999 6655877  47777764

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.54  E-value=2e-13  Score=133.68  Aligned_cols=162  Identities=9%  Similarity=0.021  Sum_probs=118.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +.-....+..++++|++.|+.  +  +++|+|+++|+..++.++ +++||+|+ +...++..  .+....+..|+++..+
T Consensus        46 r~gnPt~~~lE~~lA~l~g~~--~--~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~  120 (377)
T TIGR01324        46 RRGTLTHFALQDAMCELEGGA--G--CYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY  120 (377)
T ss_pred             CCCCccHHHHHHHHHHHhCCC--c--EEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE
Confidence            333334457888899999973  3  889999999999999888 68999987 43344321  1222345568888777


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+.      .++++++++++     +++|.+.+.  .+|.+.|+++|.+ ||++|+++++|++|+. |... +.-++++
T Consensus       121 d~~~------~e~l~~~i~~~-----tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~-g~~~-~pl~~ga  187 (377)
T TIGR01324       121 DPLI------GEDIATLIQPN-----TKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAA-GLLF-KPLEHGV  187 (377)
T ss_pred             CCCC------HHHHHHhcCCC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-cccc-CccccCc
Confidence            5431      26788888765     578877544  5899999999966 6999999999999999 8762 3335799


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      |+++.|++| ++|++.+  .|+++.+++.
T Consensus       188 Divv~S~tK-~l~G~~d~~gG~v~~~~~~  215 (377)
T TIGR01324       188 DISIQAGTK-YLVGHSDIMIGTVVANART  215 (377)
T ss_pred             eEEEecCce-eccCCCCceEEEEEeCHHH
Confidence            999999999 5554755  4667666543

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.53  E-value=2.9e-13  Score=134.91  Aligned_cols=160  Identities=11%  Similarity=0.024  Sum_probs=121.1

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +......+...+.+|++.|+.  .  .++|+|++.|+..++.++ +.+||+|+.. ..|..  ..+...++..|++++++
T Consensus        60 r~~~p~~~~Le~~lA~leg~~--~--al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v  134 (431)
T PRK08248         60 RIMNPTTDVFEKRIAALEGGI--G--ALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV  134 (431)
T ss_pred             CCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE
Confidence            333334557888899999973  3  788999999999888777 6789998643 34432  23444566779999888


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +..      +.++++++++++     +++|.+.+.  .+|.++|+++|.+ ||++|+++++|++++. +....++ ++++
T Consensus       135 d~~------d~e~l~~ai~~~-----tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~-~~~~~pl-~~ga  201 (431)
T PRK08248        135 DPS------DPENFEAAITDK-----TKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFAS-PYLLRPI-EHGA  201 (431)
T ss_pred             CCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCc-cccCChh-HcCC
Confidence            753      578888888765     467666433  5899999999976 6999999999999987 7665555 5799


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      |+++.|+|| ++|+| |  +|++++.+.
T Consensus       202 Divv~S~tK-~lgg~-g~~~Gg~v~~~~  227 (431)
T PRK08248        202 DIVVHSATK-FIGGH-GTSIGGVIVDSG  227 (431)
T ss_pred             CEEEEcCcc-ccCCC-CCceEEEEEeCC
Confidence            999999999 77745 5  888888643

>PLN02263 serine decarboxylase

Probab=99.51  E-value=5.5e-13  Score=134.10  Aligned_cols=174  Identities=8%  Similarity=-0.011  Sum_probs=122.9

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .++..+.++=+-+++++|.+++++.=+||+|+|||+.+.+.... +.+...++.+.+-|.. +...++-.|.+++.||.+
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~S-v~KAa~llgi~~~~Vp~d  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMYRMECVKVDTL  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHH-HHHHHHhcCCcceEeccC
Confidence            45556668999999999998655556899999999876443321 1121234433333322 334455568999999998


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCc-----EEEecccccCccCc-------
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAW-----HVLLDATGLVFGED-------  266 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~-----~vlvDAaQsv~G~~-------  266 (311)
                      . ++++|.+.|++.|.++..  ...+|+.++-  .+|.+=||++|++ |+++|+     ++|||||-.- .-.       
T Consensus       209 ~-~g~mD~~aL~~aI~~d~~--~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG-~~lPf~~~~~  284 (470)
T PLN02263        209 V-SGEIDCADFKAKLLANKD--KPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFG-LMMPFVKRAP  284 (470)
T ss_pred             C-CCcCcHHHHHHHHHhCCC--CcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchh-hHhhhccccc
Confidence            5 789999999999976531  1334444433  6999999999977 588886     9999999543 222       


Q ss_pred             ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          267 QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       267 pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++|+.. .+|-+++++|| |++.|.++|++++|++..
T Consensus       285 ~~df~~-~vDSIsvD~HK-~l~~P~~cgvll~R~~~~  319 (470)
T PLN02263        285 KVTFKK-PIGSVSVSGHK-FVGCPMPCGVQITRMEHI  319 (470)
T ss_pred             ccCCCc-CccEEEECCcc-ccCCCcCEEEEEEehhhH
Confidence            256554 49999999999 666699999999997643

>PLN02721 threonine aldolase

Probab=99.51  E-value=2e-13  Score=129.34  Aligned_cols=166  Identities=14%  Similarity=0.150  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHH--HHHHhCCcEEEEEeCCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIK--GFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~--~la~~~G~~V~~vp~~~~~  204 (311)
                      ..+.|+.+|+++|++  .  ++||+|+|+++..++..+...+||+|+. ...|... +.  ..+...|.+++.+|.+. +
T Consensus        42 ~~~l~~~la~~~~~~--~--~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~-~  115 (353)
T PLN02721         42 ALRLEEEMAKIFGKE--A--ALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHL-YENGGISTLGGVHPRTVKNNE-D  115 (353)
T ss_pred             HHHHHHHHHHHhCCc--e--eEEecCccHHHHHHHHHHccCCCCeEEEcCccceeh-hcccchhhhcCceeEecCCCc-C
Confidence            568999999999984  2  6788888988776666654337898863 3444311 11  13455699999998775 6


Q ss_pred             cccCHHHHHhhhhccCC--CCCceEEEEecc---cccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccCCC-
Q 021539          205 LRIKGSQLSQNFRRKCK--YTPKGLFSYPVV---VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLALA-  271 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~--~~~t~LVs~~~~---~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~-  271 (311)
                      +.+|.+++++.+++...  ..++++|.+...   .+|+.+|   +++|.+ |+++|+++++|+++.+ +..   ..+.. 
T Consensus       116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~  194 (353)
T PLN02721        116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIF-NASVALGVPVHR  194 (353)
T ss_pred             CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhh-cchhhhCCCHHH
Confidence            77899999999973100  012567776433   3788888   456755 6899999999999987 531   12222 


Q ss_pred             -CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 -LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 -~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                       ..++|++++|+|| ++|+|.| |+++.+++.
T Consensus       195 ~~~~~d~~~~s~sK-~l~~~~G-~~~~~~~~~  224 (353)
T PLN02721        195 LVKAADSVSVCLSK-GLGAPVG-SVIVGSKSF  224 (353)
T ss_pred             HhhhCCEEEEeccc-ccCCcee-eEEecCHHH
Confidence             2378999999999 6664644 345555544

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.51  E-value=3.1e-13  Score=145.86  Aligned_cols=165  Identities=15%  Similarity=0.081  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhcCCCCCCC----EE-EEccCcChHHHHHHHHhCCcEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKE-----AMLMIGESYPFFKGN----YY-LTIISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTe-----alnlv~~s~~~~~Gd----~I-ls~~eh~~~~~~~la~~~G~~V  195 (311)
                      +.+.+..+-+++++|.+  .  +.|++|+|.     ++ ++++.+.+++|+    .| ++...|.++..  .+...|++|
T Consensus       542 ~~i~e~q~~l~eltG~d--~--~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis~~aH~snp~--sa~~~G~~v  614 (954)
T PRK05367        542 ELIDQLEAWLAEITGYD--A--VSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIPSSAHGTNPA--SAVMAGMKV  614 (954)
T ss_pred             HHHHHHHHHHHHHHCCC--C--EEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEEchhhhhhHH--HHHHCCCEE
Confidence            44568899999999985  3  889998873     33 566776666665    34 46666765432  234569999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecc-cccch-hcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVV-VNGTR-YSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~-~tG~i-~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +.+|.+. +|.+|.++|++.++++.    +.++++  +.- ..|.+ .|+++|.+ +|++|++++|||+|.. +...+.-
T Consensus       615 v~v~~d~-~G~iD~~~L~~~i~~~~----~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~-al~~l~~  688 (954)
T PRK05367        615 VVVACDE-NGNIDLDDLRAKAEEHA----DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMN-AQVGLAR  688 (954)
T ss_pred             EEECCCC-CCCcCHHHHHHHHhccC----CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChh-hccCCCC
Confidence            9999985 78999999999997531    234443  333 34654 79999976 6999999999999997 7666553


Q ss_pred             -CCCCCcEEEEccccCcC----CCCCceEEEEEeCCCC
Q 021539          271 -ALHRPDLVLCTLDNNTH----AQPLKITCLLVRRKSF  303 (311)
Q Consensus       271 -~~l~~Dfl~~S~HK~l~----G~P~GiG~L~vr~~~~  303 (311)
                       .++++|++++|+|||++    |+++|+|+|++|+.+.
T Consensus       689 pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~  726 (954)
T PRK05367        689 PGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA  726 (954)
T ss_pred             hhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc
Confidence             46899999999999432    1244688999996543

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.51  E-value=1.2e-12  Score=128.05  Aligned_cols=157  Identities=13%  Similarity=0.062  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .++..+.+++++|++  .  +++|+|+|+|+++++.++.+.+||+|+ +...+... . ..+...|+++++++++..+..
T Consensus        33 ~~~~e~~la~~~g~~--~--~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~-~-~~~~~~G~~~v~vd~d~~~~~  106 (376)
T TIGR02379        33 SRRCETWLENRTGTK--K--ALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST-A-NAFVLRGAKIVFVDIRPDTMN  106 (376)
T ss_pred             HHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH-H-HHHHHcCCEEEEEecCCCcCC
Confidence            346667788888873  3  999999999999999888778999986 44554422 2 223456999999999864467


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEccc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCTLD  283 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S~H  283 (311)
                      +|.+++++.++++     +++|...+ .+|...|+++|.+ |+++|++++.|++|+. |.. .+-...+  .|+.+||+|
T Consensus       107 ~d~~~le~~i~~~-----tk~Iip~~-~~G~~~d~~~I~~la~~~~i~vIeDaa~~~-g~~-~~~~~~g~~~~~~~fSf~  178 (376)
T TIGR02379       107 IDETLIESAITHR-----TKAIVPVH-YAGVACDMDTIMALANKHQLFVIEDAAQGV-MST-YKGRALGSIGHLGTFSFH  178 (376)
T ss_pred             CCHHHHHHhcCcC-----ceEEEEeC-CCCCccCHHHHHHHHHHCCCEEEEECcccc-CCc-cCCcccCCCCCEEEEeCC
Confidence            8999999988764     56765433 5899999999966 6999999999999999 853 3433333  399999998


Q ss_pred             cC--cCCCCCceEEEEEe
Q 021539          284 NN--THAQPLKITCLLVR  299 (311)
Q Consensus       284 K~--l~G~P~GiG~L~vr  299 (311)
                      ++  +..++. .|+++.+
T Consensus       179 ~~K~l~~g~~-gG~v~~~  195 (376)
T TIGR02379       179 ETKNYTSGGE-GGALLIN  195 (376)
T ss_pred             CCCcCcccCC-ceEEEEC
Confidence            73  222233 3655555

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.51  E-value=5.9e-13  Score=131.06  Aligned_cols=159  Identities=11%  Similarity=-0.042  Sum_probs=114.5

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +.-....+..++++|++.|+  +.  +++|+|+++|+++++.++ +++||+|++.. .+...  .+.......|+++.++
T Consensus        49 R~~npt~~~Le~~lA~leg~--e~--ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v  123 (388)
T PRK08861         49 RSGNPNRGLLEQTLSELESG--KG--AVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV  123 (388)
T ss_pred             CCCCchHHHHHHHHHHHhCC--Ce--EEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE
Confidence            33333445788899999996  33  999999999999999888 67999987543 33321  2223344557888777


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.      .+.++++++++++     +++|.+..  +-+|.++|+++|.+ ||++|+++++|.+++. |....++ ++++
T Consensus       124 d~------~d~e~l~~~i~~~-----tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~-~~~~~pl-~~Ga  190 (388)
T PRK08861        124 DQ------SDAAALDAALAKK-----PKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLT-PVLQKPL-ELGA  190 (388)
T ss_pred             CC------CCHHHHHHhcCcC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc-cccCCCc-ccCC
Confidence            53      3678888888764     56776643  35999999999966 6999999999999987 6544344 3589


Q ss_pred             cEEEEccccCcCCCCCc-eEE-EEEe
Q 021539          276 DLVLCTLDNNTHAQPLK-ITC-LLVR  299 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G-iG~-L~vr  299 (311)
                      |++++|+|| ++|+|.+ +|+ ++.+
T Consensus       191 Divv~S~tK-~l~G~~d~~gG~i~~~  215 (388)
T PRK08861        191 DFVIHSTTK-YINGHSDVIGGVLITK  215 (388)
T ss_pred             CEEEeecce-eccCCCcceeEEEEec
Confidence            999999999 5544765 344 4444

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.51  E-value=3.1e-13  Score=127.61  Aligned_cols=161  Identities=14%  Similarity=0.062  Sum_probs=112.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.|+.+++++|++  +  .+++.++|+++..++.++ +.+|+.|++ ..+|.. .+ ..++..|+++..++.   
T Consensus        45 ~~~~~~l~~~la~~~~~~--~--~iv~~sg~~a~~~~~~~~-~~~gd~Vl~~~~~~~~-~~-~~~~~~g~~~~~~~~---  114 (349)
T cd06454          45 SDLHEELEEELAEFHGKE--A--ALVFSSGYAANDGVLSTL-AGKGDLIISDSLNHAS-II-DGIRLSGAKKRIFKH---  114 (349)
T ss_pred             chHHHHHHHHHHHHhCCC--C--EEEeccHHHHHHHHHHHh-cCCCCEEEEehhhhHH-HH-HHHHHcCCceEEecC---
Confidence            444578999999999984  2  444555577777666665 468998864 344432 22 234556888877653   


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc--------cCCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--------LALAL  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--------ldl~~  272 (311)
                         ++.+++++++++.....++++|.+.+.  .+|.+.|+++|.+ |+++|+++++|++|++ |..+        ++...
T Consensus       115 ---~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~-g~~~~~~~~~~~~~~~~  190 (349)
T cd06454         115 ---NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSV-GVYGPHGRGVEEFGGLT  190 (349)
T ss_pred             ---CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhhcccc
Confidence               356778888875210113567776544  5899999999966 7999999999999997 7553        33445


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      .+.|+++.|+|| ++| +.| |+++.+++.
T Consensus       191 ~~~~i~~~s~sK-~~~-~~g-G~i~~~~~~  217 (349)
T cd06454         191 DDVDIIMGTLGK-AFG-AVG-GYIAGSKEL  217 (349)
T ss_pred             ccCcEEEeechh-hhc-ccC-CEEECCHHH
Confidence            678999999999 888 556 777766554

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK07179 hypothetical protein; Provisional

Probab=99.50  E-value=4.1e-13  Score=131.34  Aligned_cols=153  Identities=14%  Similarity=0.110  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.++++|+++|++  +  ++||+|+|+|+++++.++. .+|+.++ ...+|.+. + ..++..|+++..++.      .
T Consensus       102 ~~le~~la~~~g~~--~--~~~~~sG~~An~~~l~~l~-~~g~~v~~~~~~h~s~-~-~~~~~~g~~~~~~~~------~  168 (407)
T PRK07179        102 PQFEKKLAAFTGFE--S--CLLCQSGWAANVGLLQTIA-DPNTPVYIDFFAHMSL-W-EGVRAAGAQAHPFRH------N  168 (407)
T ss_pred             HHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHhC-CCCCEEEEECCcCHHH-H-HHHHHCCCeEEEecC------C
Confidence            45667999999983  3  7899999999999998874 5688875 55565432 2 223345666544322      4


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCCCC
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALHRP  275 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l~~  275 (311)
                      |.++|+++++++    .+++|++...  .+|.++|+++|.+ |+++|+++++|.+|+. |...         +++. .++
T Consensus       169 d~~~l~~~l~~~----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~-~~v  242 (407)
T PRK07179        169 DVDHLRRQIERH----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSL-GTHGPQGAGLVAELGLT-SRV  242 (407)
T ss_pred             CHHHHHHHHHhc----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccc-cCcCCCCCchHHhcCCC-CCC
Confidence            778999988753    1467777644  5999999999976 6999999999999998 7532         2332 257


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |++++|+|| .+| + ++|+++.++++.
T Consensus       243 di~~~S~sK-~~g-~-~~G~l~~~~~~~  267 (407)
T PRK07179        243 HFITASLAK-AFA-G-RAGIITCPRELA  267 (407)
T ss_pred             CEEEeechH-hhh-c-cCeEEEeCHHHH
Confidence            999999999 888 5 489999887653

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.50  E-value=9.6e-13  Score=130.85  Aligned_cols=156  Identities=14%  Similarity=0.086  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..++..+++|++.|..  .  .++++|+++|+.+++.++ +++||+|++ ...|...  .+...+++.|+++.+++.+  
T Consensus        64 ~~~~le~~lA~l~g~~--~--al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--  136 (427)
T PRK05994         64 TNAVLEERVAALEGGT--A--ALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--  136 (427)
T ss_pred             cHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC--
Confidence            3457788999999984  2  678899999999988887 678999874 4455522  3344456679999888753  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                          +.++++++++++     +++|.+.+.  .+|.++|+++|.+ ||++|+++++|.+|+. |...-.+ ++++|+++.
T Consensus       137 ----d~~~l~~ai~~~-----tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~pl-~~gaDivv~  205 (427)
T PRK05994        137 ----DPASFERAITPR-----TKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLAS-PYLIRPI-EHGADIVVH  205 (427)
T ss_pred             ----CHHHHHHhcCcC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCCcEEEE
Confidence                567888888764     567776543  5899999999966 6999999999999998 7655444 479999999


Q ss_pred             ccccCcCCCCCc-eEEEEEeCC
Q 021539          281 TLDNNTHAQPLK-ITCLLVRRK  301 (311)
Q Consensus       281 S~HK~l~G~P~G-iG~L~vr~~  301 (311)
                      |+|| ++|+|.| +|++++...
T Consensus       206 S~tK-~lgg~~~~~gG~v~~~~  226 (427)
T PRK05994        206 SLTK-FLGGHGNSMGGIIVDGG  226 (427)
T ss_pred             cCcc-ccCCCCCcEEEEEEeCC
Confidence            9999 7774644 788888543

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.49  E-value=1.7e-13  Score=138.30  Aligned_cols=173  Identities=13%  Similarity=-0.005  Sum_probs=118.2

Q ss_pred             chhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC----C--------------------------
Q 021539          120 KGNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF----F--------------------------  168 (311)
Q Consensus       120 ~G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~----~--------------------------  168 (311)
                      .|-.....+ .-+.+++.++||++-.+  | =--+++.|+..+..++.-    .                          
T Consensus        88 ~g~~~~d~ie~l~~~ra~~lf~a~~an--v-qp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~  164 (493)
T PRK13580         88 AGCQNVDTVEWEAAEHAKELFGAEHAY--V-QPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAEL  164 (493)
T ss_pred             CCCchHHHHHHHHHHHHHHHhCCCccc--c-cCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccC
Confidence            344444444 47999999999995322  3 234666777766665521    0                          


Q ss_pred             CCCEEEEc-cC---cChHHH-HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHH
Q 021539          169 KGNYYLTI-IS---EESDYI-KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMH  242 (311)
Q Consensus       169 ~Gd~Ils~-~e---h~~~~~-~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~  242 (311)
                      .||.|++. .+   |-+... -.+ .....++...+++..++.+|.+++++.++++     +.+|++++. ..|...|++
T Consensus       165 ~gd~i~~l~l~~GGHlthg~~~n~-~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~-----~plvii~g~S~~~~~~dl~  238 (493)
T PRK13580        165 GNQRLLGMSLDSGGHLTHGFRPNI-SGKMFHQRSYGVDPDTGLLDYDEIAALAREF-----KPLILVAGYSAYPRRVNFA  238 (493)
T ss_pred             CCCEEEeecCCCCCeeecCcccch-hhheeeeEecccCcccCccCHHHHHHHHhhc-----CCEEEEeCccccCCCcCHH
Confidence            16888633 22   211110 001 1112455556676557899999999999875     467777776 457789999


Q ss_pred             HHHH-HHHCCcEEEecccccCccCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          243 WISE-AHRNAWHVLLDATGLVFGEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       243 ~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|.+ |+++|++++||++|++ |.+..++..      .++||+++|+|||++| |.| |+++.++++.+
T Consensus       239 ~i~eia~~~gA~L~VD~AH~~-Gligg~~~~~~~~~~~~~D~vtgT~hKaL~G-P~G-G~I~~~~~l~~  304 (493)
T PRK13580        239 KLREIADEVGAVLMVDMAHFA-GLVAGKVFTGDEDPVPHADIVTTTTHKTLRG-PRG-GLVLAKKEYAD  304 (493)
T ss_pred             HHHHHHHHcCCEEEEECchhh-ceeccccchhhcCCCCCCcEEEeCChhhccC-CCe-EEEEecHHHHH
Confidence            9977 6999999999999999 999877621      3699999999996667 987 88998877543

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.49  E-value=1.1e-12  Score=129.47  Aligned_cols=154  Identities=11%  Similarity=-0.002  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .....|++||++.++.  +  +++|+|+++|++.++.++ +++||+|+. ...+...  .+....++.|+++.+++.+  
T Consensus        62 t~~~Le~~iA~le~~~--~--~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~--  134 (394)
T PRK09028         62 THFAFQAAIVELEGGA--G--TALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM--  134 (394)
T ss_pred             hHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC--
Confidence            3457899999998873  3  899999999999998887 689999874 3344321  1223345578888877542  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                          +.++++++++++     +++|.+...  -+|.+.|+++|.+ ||++|++++||.+|+. |. .++--++++|+++.
T Consensus       135 ----~~e~l~~~l~~~-----TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~-p~-~~~Pl~~GaDivv~  203 (394)
T PRK09028        135 ----IGEGIRELIRPN-----TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWAS-PI-NSRPFEMGVDISIQ  203 (394)
T ss_pred             ----CHHHHHHhcCcC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccc-cc-cCCccccCceEEEE
Confidence                346788888765     578887654  5899999999966 6999999999999998 73 23333579999999


Q ss_pred             ccccCcCCCCCc--eEEEEEe
Q 021539          281 TLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       281 S~HK~l~G~P~G--iG~L~vr  299 (311)
                      |+|||+.| +.+  .|+++.+
T Consensus       204 S~tK~l~G-h~d~~~G~~~~~  223 (394)
T PRK09028        204 AATKYIVG-HSDVMLGTATAN  223 (394)
T ss_pred             eCCeEecC-CCCEEEEEEECC
Confidence            99995445 733  3444433

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.48  E-value=4.9e-13  Score=125.96  Aligned_cols=168  Identities=20%  Similarity=0.176  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH-HHHHHhCCcEEEEEeCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI-KGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~-~~la~~~G~~V~~vp~~~~  203 (311)
                      ...++.|+.+++++|  +++  ++||+|+|+|+.+++.++ +.+|+.|+ +...|..... ...+...|+++..+|.+. 
T Consensus        32 ~~~~~l~~~~a~~~g--~~~--~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-  105 (338)
T cd06502          32 PTTAKLEARAAELFG--KEA--ALFVPSGTAANQLALAAH-TQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-  105 (338)
T ss_pred             HHHHHHHHHHHHHhC--CCe--EEEecCchHHHHHHHHHh-cCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCC-
Confidence            345689999999999  333  999999999999998887 57889886 4445542111 012233589998898753 


Q ss_pred             CcccCHHHHHhhhhccCCC--CCceEEEEecc-cccchhcH---HHHHH-HHHCCcEEEecccccC-----ccCcccCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKY--TPKGLFSYPVV-VNGTRYSM---HWISE-AHRNAWHVLLDATGLV-----FGEDQLALA  271 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~--~~t~LVs~~~~-~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv-----~G~~pldl~  271 (311)
                       +.+|.++|++++++..+.  .++++|.++.. .+|.++|.   ++|.+ |+++|+++++|+++..     .|. +++..
T Consensus       106 -~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~  183 (338)
T cd06502         106 -GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV-ALKTY  183 (338)
T ss_pred             -CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHH
Confidence             568999999998742100  12567766543 35755454   55654 5889999999998742     032 22221


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ..++|++++|+|| +||.| |-++++.+++..
T Consensus       184 ~~~~d~~~~s~sK-~~~~~-~g~~~~~~~~~~  213 (338)
T cd06502         184 KSGVDSVSFCLSK-GGGAP-VGAVVVGNRDFI  213 (338)
T ss_pred             HhcCCEEEEeccc-cCCCc-cceEEECCHHHH
Confidence            2478999999999 88856 534455565543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.47  E-value=3.3e-13  Score=128.31  Aligned_cols=164  Identities=17%  Similarity=0.120  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      ++.|+.+|+++|+++++  |+||+|+|+++++++.++ ..+|+.|+...-... .....++..|+++..+|.+. ++.++
T Consensus        57 ~~lr~~ia~~~~~~~~~--i~~~~G~~~~l~~~~~~l-~~~gd~v~~~~p~y~-~~~~~~~~~g~~~~~~~~~~-~~~~d  131 (346)
T TIGR01141        57 AELKQALADYYGVDPEQ--ILLGNGSDEIIELLIRAF-LEPGDAVLVPPPTYS-MYEISAKIHGAEVVKVPLDE-DGQLD  131 (346)
T ss_pred             HHHHHHHHHHhCcChHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCHH-HHHHHHHHcCCeEEEeccCC-CCCCC
Confidence            58999999999987654  999999999999998887 367888875432221 22333456799999999875 57789


Q ss_pred             HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccC--cccCC-CCCCCcEEEE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGE--DQLAL-ALHRPDLVLC  280 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~--~pldl-~~l~~Dfl~~  280 (311)
                      .+++++.+.++     +++|.++..  -||.++|++++.+ ++..  ++++++|.+++-...  .++++ .....++++.
T Consensus       132 ~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~  206 (346)
T TIGR01141       132 LEDILVAIDDK-----PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLR  206 (346)
T ss_pred             HHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEe
Confidence            99998877554     466666533  6999999999866 4544  999999999872121  12222 1123357788


Q ss_pred             ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          281 TLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      |++| +|| +.|  +|++++++++.+
T Consensus       207 S~sK-~~g-~~G~r~G~~~~~~~~~~  230 (346)
T TIGR01141       207 TLSK-AFG-LAGLRIGYAIANAEIID  230 (346)
T ss_pred             hhhH-hhh-chhhhceeeecCHHHHH
Confidence            9999 776 336  799998776543

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.46  E-value=4e-13  Score=143.53  Aligned_cols=163  Identities=15%  Similarity=0.073  Sum_probs=118.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-HH---HHHHhcCCCCCC----CEE-EEccCcChHHHHHHHHhCCcEEEE
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKE-AM---LMIGESYPFFKG----NYY-LTIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTe-al---nlv~~s~~~~~G----d~I-ls~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      .+.+-.+.+++++|.+  .  +-|-+|++. |.   -++++.|--.+|    +.+ ++..+|++|...  +...|++|+.
T Consensus       544 ~i~elq~~l~eLtGmd--~--~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--a~~~GieVv~  617 (954)
T PRK12566        544 MIDELEAWLCAITGFD--A--ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--AQMAGMRVVI  617 (954)
T ss_pred             HHHHHHHHHHHHHCCC--e--EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--HHHCCCEEEE
Confidence            3567778999999995  2  567775554 22   233344311122    344 466778766432  4456999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHHHHH-HHHCCcEEEecccccCccCcccC-CCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-LALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-l~~l  273 (311)
                      +|.+. +|.+|.++|++++++..  .++..|.+++. ..| ...|+++|.+ +|++|+++++||+|.+ +...++ ..++
T Consensus       618 Vp~D~-~G~iDle~L~a~I~~~~--~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~-a~~~l~~Pg~~  693 (954)
T PRK12566        618 VECDP-DGNVDLDDLKAKAAAAG--DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLN-AQVGLARPADI  693 (954)
T ss_pred             eccCC-CCCcCHHHHHHHhhccC--CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChh-hccCCCChhhc
Confidence            99985 78999999999997321  12444444544 334 4477999966 6999999999999999 999988 4889


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ++||+++++|| +||.|.|.|++|+..
T Consensus       694 GADi~~~s~HK-tf~~P~G~GGP~vG~  719 (954)
T PRK12566        694 GADVSHMNLHK-TFCIPHGGGGPGMGP  719 (954)
T ss_pred             CCCEEEecCCc-ccCcCccCCCCccch
Confidence            99999999999 666699999999887

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.46  E-value=2.3e-12  Score=127.60  Aligned_cols=160  Identities=12%  Similarity=0.011  Sum_probs=119.1

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +......++.++++|++.|+.  .  .+||+|+++|+..++.++ +++|++|+ +...++.  ..+...++..|+++..+
T Consensus        53 r~~~p~~~~le~~lA~l~g~~--~--~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v  127 (418)
T TIGR01326        53 RLMNPTTDVLEQRIAALEGGV--A--ALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV  127 (418)
T ss_pred             CCCChhHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE
Confidence            444444568999999999973  3  889999999999888776 56899986 4434432  22344456679999888


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+      +.++++++++++     +++|.+...  -+|.+.|+++|.+ ||++|+++++|.+++. |.....+ .+++
T Consensus       128 ~~~------d~~~l~~~l~~~-----t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~-~~~~~~l-~~g~  194 (418)
T TIGR01326       128 DPD------DPEEFEKAIDEN-----TKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT-PYLCRPI-DHGA  194 (418)
T ss_pred             CCC------CHHHHHHhcCcC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch-hhcCCch-hcCC
Confidence            752      578898888765     456655432  5899999999966 6999999999999997 7433333 4679


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      |+++.|++| ++| +.|  +|.++++++
T Consensus       195 Divv~S~sK-~l~-g~G~~lGg~v~~~~  220 (418)
T TIGR01326       195 DIVVHSATK-YIG-GHGTAIGGVIVDGG  220 (418)
T ss_pred             eEEEECccc-ccc-CCccceEEEEEecc
Confidence            999999999 777 335  888888653

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.46  E-value=4.2e-12  Score=123.49  Aligned_cols=154  Identities=14%  Similarity=0.070  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++..+.+++++|++  .  +++|+|+|+|+++++..+.+.+||+|++. ..+.. . ...+...|+++++++++..+..+
T Consensus        34 ~~~e~~la~~~g~~--~--~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~-~-~~~~~~~G~~~v~~d~d~~~~~~  107 (375)
T PRK11706         34 RRCQQWLEQRFGSA--K--VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS-T-ANAFVLRGAKIVFVDIRPDTMNI  107 (375)
T ss_pred             HHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH-H-HHHHHHcCCEEEEEecCCCcCCc
Confidence            45666788889883  3  99999999999998877767789998744 44432 2 23345569999999988644578


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC--CCCcEEEEccc-
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL--HRPDLVLCTLD-  283 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~--l~~Dfl~~S~H-  283 (311)
                      +.+++++.++++     +++|.+.+ .+|...++++|.+ |+++|++++.|++|+. |.. .+-..  .-.|+-+||+| 
T Consensus       108 d~~~le~~i~~~-----tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~-g~~-~~~~~~g~~~~~~~~Sf~~  179 (375)
T PRK11706        108 DETLIEAAITPK-----TRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGV-MST-YKGRALGTIGHIGCFSFHE  179 (375)
T ss_pred             CHHHHHHhcCCC-----CeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECcccc-ccc-cCCeeeecCcCEEEEeCCC
Confidence            999999998764     45555544 4899999999966 6999999999999999 852 22211  12599999999 


Q ss_pred             -cCcCCCCCce-EEEEEe
Q 021539          284 -NNTHAQPLKI-TCLLVR  299 (311)
Q Consensus       284 -K~l~G~P~Gi-G~L~vr  299 (311)
                       | .++ + |. |+++++
T Consensus       180 ~K-~l~-~-g~gG~~~~~  194 (375)
T PRK11706        180 TK-NYT-A-GEGGALLIN  194 (375)
T ss_pred             Cc-ccc-c-cCCeEEEEC
Confidence             9 777 5 54 444443

>PRK05939 hypothetical protein; Provisional

Probab=99.45  E-value=3e-12  Score=126.28  Aligned_cols=159  Identities=10%  Similarity=-0.009  Sum_probs=117.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++.-....++..+++|++.|+..   .|+|++| +.|+..++.++ +++||+|++ ...+..  ..+.. .++.|+++.+
T Consensus        42 ~r~g~p~~~~lE~~la~leg~~~---~v~~ssG-~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~  115 (397)
T PRK05939         42 ARQGTPTTAALEAKITKMEGGVG---TVCFATG-MAAIAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTM  115 (397)
T ss_pred             CCCCCHHHHHHHHHHHHHhCCCe---EEEeCCH-HHHHHHHHHHH-cCCCCEEEECCCccccHHHHHHH-HHhcCCEEEE
Confidence            44444556688889999999852   3766665 78999988877 689999874 334432  23333 4567999998


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++..      +.++|+++++++     +++|.+.+.  .+|.+.|+++|.+ ||++|+++++|++|+. | ..++...++
T Consensus       116 v~~~------d~e~l~~~l~~~-----tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~-~-~~~~~~~~g  182 (397)
T PRK05939        116 VDAT------DVQNVAAAIRPN-----TRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS-P-WLFRPKDVG  182 (397)
T ss_pred             ECCC------CHHHHHHhCCCC-----CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc-c-cccCccccC
Confidence            8763      578899888765     577777544  5999999999966 7999999999999988 7 345666678


Q ss_pred             CcEEEEccccCcCCCCCc-eEEEEEe
Q 021539          275 PDLVLCTLDNNTHAQPLK-ITCLLVR  299 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G-iG~L~vr  299 (311)
                      +|+++.|++| ++|++.+ +|+.++.
T Consensus       183 aDivv~S~sK-~~~g~g~~igg~v~~  207 (397)
T PRK05939        183 ASLVINSLSK-YIAGHGNALGGAVTD  207 (397)
T ss_pred             CEEEEecCee-cccCCCCeEEEEEec
Confidence            9999999999 6663422 4666654

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.45  E-value=9.6e-13  Score=125.73  Aligned_cols=167  Identities=15%  Similarity=0.134  Sum_probs=127.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH-HhcCCCCCCCEEEEccCcC--hH-HH-HHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMI-GESYPFFKGNYYLTIISEE--SD-YI-KGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv-~~s~~~~~Gd~Ils~~eh~--~~-~~-~~la~~~G~~V~~vp~~~~  203 (311)
                      +..=.++|-++|+.++|  |+.|.++|--++.+ +.++...+|+.++..-.+.  .+ ++ ..+++-.+..     .+. 
T Consensus        79 ~~lgdklApLiGA~~~E--vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~-  150 (407)
T COG3844          79 ERLGDKLAPLIGARAGE--VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDL-  150 (407)
T ss_pred             hHHHHHhhhhhcCCCCc--eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccc-
Confidence            45667899999998776  88888877766554 4466666787765332222  21 11 2222222221     121 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                      .+.+.+.++.+.+..+     +.+|+++++  -||..+++..|.. +|++|+++.-|-+|++ |..|+|+...++||-+.
T Consensus       151 ~~~~~P~~~~~~~~dd-----~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsa-Gavp~~Lh~~gaDfaig  224 (407)
T COG3844         151 EGVIAPRALEEAITDD-----VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSA-GAVPVDLHAAGADFAIG  224 (407)
T ss_pred             eeeeChHHHHHhhccc-----eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhccc-CCcceeecccCCCeeee
Confidence            3556777888999876     689999988  5999999999955 7999999999999999 99999999999999999


Q ss_pred             ccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          281 TLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      +.||++.|+|-+.++|||.++..+.+-|+
T Consensus       225 csyKYLNgGPGapa~l~v~~~h~e~~~~~  253 (407)
T COG3844         225 CSYKYLNGGPGAPAGLFVAPRHRERSWPP  253 (407)
T ss_pred             eeceeccCCCCCceeEEeccccccccccc
Confidence            99998889999999999999998876665

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.44  E-value=1.9e-12  Score=138.79  Aligned_cols=168  Identities=14%  Similarity=0.035  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHH---HHHHhcCCCCC----CCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAM---LMIGESYPFFK----GNYYL-TIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTeal---nlv~~s~~~~~----Gd~Il-s~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      +.+.+...-++++.|.+..   =++.++++.|-   -++++.+--.+    .+.++ +...|..+..  .++..|++|+.
T Consensus       530 q~i~elq~~l~eltGmd~~---Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--sa~~~G~~Vv~  604 (939)
T TIGR00461       530 ELIAQLEKWLCSITGFDAI---SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--SAAMAGMQVVP  604 (939)
T ss_pred             HHHHHHHHHHHHHHCCCCc---ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--HHHHCCCEEEE
Confidence            4567899999999999731   23344444322   22444431111    23453 5555654422  14456999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhc-HHHHHH-HHHCCcEEEecccccCccCcccC-CCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYS-MHWISE-AHRNAWHVLLDATGLVFGEDQLA-LALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv~G~~pld-l~~l  273 (311)
                      +|.+. +|.+|.++|++++++..  ..+++|++++. .+|.+.| |++|.+ +|++|..+++||+|.. +...++ ..++
T Consensus       605 V~~d~-~G~iDle~L~~~i~~~~--~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~-al~~l~~Pg~~  680 (939)
T TIGR00461       605 VNCDQ-DGNIDLVDLKNKAEQHG--DELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMN-AQVGLTSPGDL  680 (939)
T ss_pred             eccCC-CCCcCHHHHHHHHhhcC--CceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChh-hCCCCCCcccc
Confidence            99975 89999999999997511  12677777765 5799988 999976 6999999999999988 655554 4678


Q ss_pred             CCcEEEEccccCcC-----CCCCceEEEEEeCCCC
Q 021539          274 RPDLVLCTLDNNTH-----AQPLKITCLLVRRKSF  303 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~-----G~P~GiG~L~vr~~~~  303 (311)
                      ++||+++|+|||++     | |+|+|++.+|+.+.
T Consensus       681 GaDi~~~s~HKtf~~P~G~G-GPg~G~i~vr~~L~  714 (939)
T TIGR00461       681 GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKSHLI  714 (939)
T ss_pred             CCCEEEecCCccCCCCCCCC-CCCeEEEEEhhhch
Confidence            99999999999666     4 55789999997543

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.44  E-value=2.2e-12  Score=127.26  Aligned_cols=162  Identities=12%  Similarity=-0.018  Sum_probs=116.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh-H-HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES-D-YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~-~-~~~~la~~~G~~V~~  197 (311)
                      ++......++.++.+|+++|++  .  .+.++|++.|+.+++.++ +.+||+|++.. .|.. . .....++..|+++..
T Consensus        60 ~r~~~p~~~~le~~lA~l~g~~--~--~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~  134 (403)
T PRK07503         60 SRISNPTLALLEQRMASLEGGE--A--AVALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRH  134 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence            4444444678999999999984  2  456667888999988876 68999987443 2321 1 123334567999888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +++.++++++++     +++|.+..  +-+|.+.|+++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus       135 vd~~------d~~~l~~~i~~~-----tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~-~~~~~~l-~~g  201 (403)
T PRK07503        135 VDLT------DPAALKAAISDK-----TRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCT-PYLQRPL-ELG  201 (403)
T ss_pred             eCCC------CHHHHHHhcCcc-----CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence            8763      567888888764     46766642  25899999999966 6999999999999987 6544444 368


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      +|++++|++| ++|+|.+  .|+++.+++
T Consensus       202 ~Di~v~S~tK-~l~g~gd~~gG~v~~~~~  229 (403)
T PRK07503        202 ADLVVHSATK-YLGGHGDITAGLVVGGKA  229 (403)
T ss_pred             CCEEEccccc-cccCCCceeEEEEEcCHH
Confidence            9999999999 7774533  677775544

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.43  E-value=3.5e-12  Score=125.80  Aligned_cols=160  Identities=10%  Similarity=0.003  Sum_probs=114.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|+.  +  .+.++++++|+..++.++ +++||+|++ ...|..  ..+...++..|+++.+
T Consensus        59 ~r~~~p~~~~le~~lA~l~g~~--~--~i~~ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~  133 (398)
T PRK08249         59 SRNTNPTVQAFEEKVRILEGAE--A--ATAFSTGMAAISNTLYTF-LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTL  133 (398)
T ss_pred             cCCCChHHHHHHHHHHHHhCCC--e--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence            5666666789999999999984  2  445555578999888776 578999874 444442  2234445567888877


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.      .+.++++++++++     +++|.+.  .+-+|.++|+++|.+ ||++|+.+++|++++. +...-.+ .++
T Consensus       134 vd~------~d~e~l~~~i~~~-----tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~~  200 (398)
T PRK08249        134 CET------GDHEQIEAEIAKG-----CDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFAT-PINQNPL-ALG  200 (398)
T ss_pred             cCC------CCHHHHHHhcCCC-----CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCc-cccCCch-hhC
Confidence            653      3678899998765     5677663  336999999999966 6999999999999997 5433223 368


Q ss_pred             CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539          275 PDLVLCTLDNNTHAQPL-KITCLLVR  299 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~-GiG~L~vr  299 (311)
                      +|++++|++| ++|++. ++|.+++.
T Consensus       201 ~Divv~S~sK-~l~g~~~~~gG~vv~  225 (398)
T PRK08249        201 ADLVIHSATK-FLSGHADALGGVVCG  225 (398)
T ss_pred             CCEEeccCce-ecCCCCCceEEEEEC
Confidence            9999999999 777343 24444443

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.43  E-value=2.5e-12  Score=127.32  Aligned_cols=169  Identities=13%  Similarity=0.035  Sum_probs=113.3

Q ss_pred             hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHH-HHhCCcEE--
Q 021539          121 GNFISIPEIQ-ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGF-AAQKESKV--  195 (311)
Q Consensus       121 G~~~~~~le~-aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~l-a~~~G~~V--  195 (311)
                      |......+|+ +++++|+++|+.   +.++|++++|.|+..++.++ .++||+|++.. .|.+...... ....+..+  
T Consensus        68 G~~~~~~lE~~~~~~la~l~g~~---~alv~~~SG~~A~~~~l~al-~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~  143 (416)
T PRK13034         68 GCEFVDEVEALAIERAKQLFGCD---YANVQPHSGSQANGAVYLAL-LKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNA  143 (416)
T ss_pred             CChHHHHHHHHHHHHHHHHhCCC---ceEEecCCcHHHHHHHHHHh-cCCCCEEEEcCccceeeeecCCcceeccceeee
Confidence            4455566676 999999999985   33577889999999999888 68999987543 4432110000 00011222  


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC--
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL--  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~--  272 (311)
                      ...+.+..++.+|.+++++.++..    ++++|.+....+|...|+++|.+ |+++|+++++|+||++ |........  
T Consensus       144 ~~~~~~~~~~~~d~~~le~~l~~~----~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~-G~~~~g~~~~~  218 (416)
T PRK13034        144 VQYGVDRLTGLIDYDEVEELAKEH----KPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIA-GLVAAGEHPNP  218 (416)
T ss_pred             EEcccccccCCcCHHHHHHHHhhc----CCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccc-cCcccCCCCCC
Confidence            233333324568999999888642    14677654335899999999976 6999999999999998 876444311  


Q ss_pred             -CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                       ..+|++++|+|||+.| |.| |+++.++
T Consensus       219 ~~~~Di~~~s~~K~l~g-~~G-G~v~~~~  245 (416)
T PRK13034        219 FPHAHVVTTTTHKTLRG-PRG-GMILTND  245 (416)
T ss_pred             CCCceEEEEeCcccCCC-CCC-eEEEECc
Confidence             2589999999994445 877 5555443

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.43  E-value=2.5e-12  Score=119.93  Aligned_cols=161  Identities=15%  Similarity=0.063  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHcCCC----CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHCGLS----EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~Lga~----~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ++.|+.++++++..    ....+++||+|+|++++.++.++. .+|+.|+.. ..|+.  ....++..|.++..+|.++ 
T Consensus        39 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~~~~~--~~~~~~~~~~~~~~i~~~~-  114 (350)
T cd00609          39 PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVPDPTYPG--YEAAARLAGAEVVPVPLDE-  114 (350)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEcCCCchh--HHHHHHHCCCEEEEEeccc-
Confidence            46777777777754    113359999999999999999884 568888643 34432  2334556689999999876 


Q ss_pred             CcccCH--HHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHH---H-HHHCCcEEEecccccCccCc----c---c
Q 021539          204 DLRIKG--SQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGED----Q---L  268 (311)
Q Consensus       204 ~g~id~--~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~~----p---l  268 (311)
                      ++..+.  +.++....++     +++|.+++.  .+|.++|++++.   + |+++|+++++|++++. +..    +   .
T Consensus       115 ~~~~~~~~~~~~~~~~~~-----~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~~~  188 (350)
T cd00609         115 EGGFLLDLELLEAAKTPK-----TKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE-LVYDGEPPPALA  188 (350)
T ss_pred             ccCCccCHHHHHhhcCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhh-ceeCCccccccc
Confidence            444443  4555554433     567766554  589999988774   3 6899999999999986 432    1   2


Q ss_pred             CCCCCCCcEEEEccccCcCC-CCCceEEEEEeC
Q 021539          269 ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRR  300 (311)
Q Consensus       269 dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~  300 (311)
                      .....+.|+++.|+|| ++| .+.++|++++++
T Consensus       189 ~~~~~~~~~~~~s~~K-~~~~~g~~~G~i~~~~  220 (350)
T cd00609         189 LLDAYERVIVLRSFSK-TFGLPGLRIGYLIAPP  220 (350)
T ss_pred             CcCccCcEEEEeeccc-ccCCcccceEEEecCH
Confidence            3455678999999999 665 234689999887

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.42  E-value=6.1e-12  Score=123.37  Aligned_cols=160  Identities=12%  Similarity=-0.008  Sum_probs=115.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +.-....++.++.+|++.|.  ++  +++|+|+++|+.+++.++ +++||+|+.. ..+..  ..+..++...++++..+
T Consensus        47 R~~~p~~~~le~~lA~l~g~--~~--v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~  121 (382)
T TIGR02080        47 RSGNPTRDLLQQALAELEGG--AG--AVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV  121 (382)
T ss_pred             CCCCchHHHHHHHHHHHhCC--Cc--EEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE
Confidence            33333456788899999995  33  999999999999999988 6789998743 33332  22344455556777766


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.      .+.+.++++++++     +++|.+.  .+-+|.+.|+++|.+ ||++|+++++|.+++. +...-++ .+++
T Consensus       122 d~------~d~~~l~~ai~~~-----tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~pl-~~ga  188 (382)
T TIGR02080       122 DQ------GDEQALRAALAQK-----PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLS-PALQNPL-ALGA  188 (382)
T ss_pred             CC------CCHHHHHHhcCcC-----ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCC
Confidence            42      2578888888764     4666653  336999999999966 6999999999999987 6543333 3578


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      |+++.|++| +++++.|  .|++.+++
T Consensus       189 Divv~S~sK-~l~G~~~~~~G~i~~~~  214 (382)
T TIGR02080       189 DLVLHSCTK-YLNGHSDVIAGAVIAKD  214 (382)
T ss_pred             CEEEeecce-eccCCCCceeEEEEeCC
Confidence            999999999 5544766  66655543

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.42  E-value=5.9e-12  Score=123.72  Aligned_cols=159  Identities=12%  Similarity=0.015  Sum_probs=115.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +.-....++.++++|++.|..  +  +++|+|+++|+.+++.++ +++||+|+.. ..+..  ..+..++...|+++..+
T Consensus        48 R~~~pt~~~L~~~lA~l~g~~--~--~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v  122 (386)
T PRK08045         48 RRGNPTRDVVQRALAELEGGA--G--AVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV  122 (386)
T ss_pred             CCCCccHHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe
Confidence            333344568999999999962  3  999999999999998876 5789998744 34442  22344444556677765


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.      .+.++++++++++     +++|.+...  -+|.++|+++|.+ ||++|+++++|.+++. +.....+ .+++
T Consensus       123 d~------~d~e~l~~~l~~~-----tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~-~~~~~pl-~~ga  189 (386)
T PRK08045        123 DQ------GDEQALRAALAEK-----PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLS-PALQNPL-ALGA  189 (386)
T ss_pred             CC------CCHHHHHHhcccC-----CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCCch-hhCC
Confidence            32      3678888888764     466665432  5999999999966 6999999999999988 7554444 4689


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEe
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      |+++.|+|| ++|+|.+  .|+++.+
T Consensus       190 Divv~S~tK-~l~G~~d~~~G~vi~~  214 (386)
T PRK08045        190 DLVLHSCTK-YLNGHSDVVAGVVIAK  214 (386)
T ss_pred             CEEEeecce-eccCCCCceeEEEEeC
Confidence            999999999 5544766  5655554

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.42  E-value=1.9e-12  Score=130.13  Aligned_cols=170  Identities=14%  Similarity=0.036  Sum_probs=125.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--C-----CCC------CEEEEccCcChHHHHHHHHh
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--F-----FKG------NYYLTIISEESDYIKGFAAQ  190 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~-----~~G------d~Ils~~eh~~~~~~~la~~  190 (311)
                      +....+++=.-+++++|++ ++..=+||+|+|||+.+.+....  |     ..+      -+|+.+...|. ++...++.
T Consensus        99 a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~-s~~Kaa~~  176 (460)
T COG0076          99 AAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHF-SFEKAARY  176 (460)
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchh-HHHHHHHH
Confidence            3444568888999999997 45568999999999886543321  1     101      14655444332 24445566


Q ss_pred             CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCce--EEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCc
Q 021539          191 KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKG--LFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED  266 (311)
Q Consensus       191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~--LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~  266 (311)
                      .|+++..+|.+..+.++|.+++++++++.+    ..  +|+.... .+|.+=||++|++ |+++++++|||||=.. ...
T Consensus       177 lG~~~~~v~~~~~~~~id~~~l~~~i~~~t----~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG-~~~  251 (460)
T COG0076         177 LGLGLRRVPTVPTDYRIDVDALEEAIDENT----IGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGG-FLL  251 (460)
T ss_pred             hCCCceeEEeccCccccCHHHHHHHHHhhc----cCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccc-eee
Confidence            799999988775468999999999999864    23  6665555 6999999999987 5999999999999665 545


Q ss_pred             cc-------CCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          267 QL-------ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       267 pl-------dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      |+       |+..-++|.+++++|| |+..|.|+|++++|++
T Consensus       252 pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~  292 (460)
T COG0076         252 PFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDE  292 (460)
T ss_pred             cccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECH
Confidence            43       3444479999999999 5555999999999987

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.42  E-value=3.4e-12  Score=125.22  Aligned_cols=157  Identities=11%  Similarity=-0.047  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...++.|+++|++.|++.   .++|+ |+++|+.+++.++ +.+||+|++. ..+...  .+....++.|+++..++.  
T Consensus        61 p~~~~Le~~lA~~~g~~~---~i~~~-sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~--  133 (388)
T PRK07811         61 PTRTALEEQLAALEGGAY---GRAFS-SGMAATDCLLRAV-LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL--  133 (388)
T ss_pred             ccHHHHHHHHHHHhCCCc---eEEeC-CHHHHHHHHHHHH-hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC--
Confidence            335689999999999853   36665 5689999999888 6899998754 333322  223333445887777654  


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL  279 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~  279 (311)
                          .+.++|+++++++     +++|.+.  .+-+|.+.|+++|.+ ||++|+++++|.+++. +.....+. +++|+++
T Consensus       134 ----~d~e~l~~~i~~~-----tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~-~~~~~p~~-~gaDivv  202 (388)
T PRK07811        134 ----SDLDAVRAAITPR-----TKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFAS-PYLQQPLA-LGADVVV  202 (388)
T ss_pred             ----CCHHHHHHhcCcC-----CeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCc-cccCCchh-hCCcEEE
Confidence                2678898888764     4676654  235899999999976 6999999999999998 75544443 5899999


Q ss_pred             EccccCcCCCCCc--eEEEEEeCC
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      +|++| ++|+|.+  .|+++.+++
T Consensus       203 ~S~sK-~l~g~~~~~gG~vv~~~~  225 (388)
T PRK07811        203 HSTTK-YIGGHSDVVGGALVTNDE  225 (388)
T ss_pred             ecCce-eecCCCCcEEEEEEECCH
Confidence            99999 6664754  577777643

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.42  E-value=6.8e-12  Score=122.64  Aligned_cols=162  Identities=11%  Similarity=0.001  Sum_probs=115.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|++  .  +++++|+++|+..++.++ +++||+|+.. ..|..  ..+..++++.|+++..
T Consensus        49 ~r~~~p~~~~le~~la~l~g~~--~--~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~  123 (380)
T TIGR01325        49 SRYANPTVAAFEERIAALEGAE--R--AVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSF  123 (380)
T ss_pred             ecCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEE
Confidence            3444445678999999999983  3  788999999999888877 5789998743 33432  2234455667999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.+++++.++++     +++|.+..  +.+|.+.|+++|.+ ||++|+++++|.+++. +...-.+ .++
T Consensus       124 v~~~------d~~~l~~~i~~~-----tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~-~~~~~pl-~~g  190 (380)
T TIGR01325       124 VDPT------DLNAWEAAVKPN-----TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT-PVLQQPL-KLG  190 (380)
T ss_pred             ECCC------CHHHHHHhcCCC-----ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence            8763      467888888654     46766643  25899999999966 6999999999999975 4322223 357


Q ss_pred             CcEEEEccccCcCCCCC-ce-EEEEEeCC
Q 021539          275 PDLVLCTLDNNTHAQPL-KI-TCLLVRRK  301 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~-Gi-G~L~vr~~  301 (311)
                      +|++++|++| ++|++. .+ |+++.+++
T Consensus       191 ~Divv~S~sK-~l~g~g~~~gG~vv~~~~  218 (380)
T TIGR01325       191 ADVVVYSATK-HIDGQGRVMGGVIAGSEE  218 (380)
T ss_pred             CCEEEeeccc-eecCCCCeEEEEEEeCHH
Confidence            9999999999 666352 24 55554544

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.42  E-value=3.6e-12  Score=123.30  Aligned_cols=163  Identities=18%  Similarity=0.208  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC-C-C
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW-L-D  204 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~-~-~  204 (311)
                      ..+.|+.+|+++|+++++  |+||+|+|+|+++++.++ ..+|+.|+. ...+..  ....++..|+++..+|++. . +
T Consensus        68 ~~~lr~~ia~~l~~~~~~--v~~~~g~t~al~~~~~~~-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~  142 (380)
T PRK06225         68 FPELRELILKDLGLDDDE--ALITAGATESLYLVMRAF-LSPGDNAVTPDPGYLI--IDNFASRFGAEVIEVPIYSEECN  142 (380)
T ss_pred             hHHHHHHHHHhcCCCCCc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--hHHHHHHhCceEEeeccccccCC
Confidence            458999999999998764  999999999999999887 467888763 333321  2233456699999888642 1 3


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc---HHHHHH-HHHCCcEEEeccccc---CccCccc-CCCCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS---MHWISE-AHRNAWHVLLDATGL---VFGEDQL-ALALHR  274 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P---i~~I~~-a~~~g~~vlvDAaQs---v~G~~pl-dl~~l~  274 (311)
                      ..++.+.+++.++++     ++++.+. .+ .||.++|   +++|.+ |+++|+++++|.++.   . +..++ .+. -+
T Consensus       143 ~~~d~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~-~~  215 (380)
T PRK06225        143 YKLTPELVKENMDEN-----TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYA-PE  215 (380)
T ss_pred             ccCCHHHHHhhcCCC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcC-CC
Confidence            468999999888764     4555543 23 6999887   455544 688999999999874   2 32221 111 13


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      ..+++.|+.| ++| +.|  +|+++.++++++
T Consensus       216 ~~i~~~s~SK-~~g-~~G~RiG~i~~~~~l~~  245 (380)
T PRK06225        216 HTVTSYSFSK-IFG-MAGLRIGAVVATPDLIE  245 (380)
T ss_pred             CEEEEeechh-hcC-CccceeEEEecCHHHHH
Confidence            3566678889 888 668  699998766543

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.42  E-value=8.6e-12  Score=123.33  Aligned_cols=160  Identities=13%  Similarity=0.026  Sum_probs=113.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +......++.++++|++.|+. +   -++++|+++|+++++.++ +++||+|+... .+..  ..++.+++..|+++..+
T Consensus        56 R~~~p~~~~Le~~lA~l~g~~-~---~v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v  130 (405)
T PRK08776         56 RSGNPTRDLLGEALAELEGGA-G---GVITATGMGAINLVLNAL-LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA  130 (405)
T ss_pred             CCCChHHHHHHHHHHHHhCCC-c---eEEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE
Confidence            333334467889999999973 2   345666689999999888 68999987433 3332  12344455668887777


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.      .+.++|++.++++     +++|.+.  ++-+|.+.|+++|.+ ||++|+++++|.+++. |...-.+ .+++
T Consensus       131 ~~------~d~~~l~~~i~~~-----tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~-~~~~~pl-~~ga  197 (405)
T PRK08776        131 DL------TDPRSLADALAQS-----PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLS-PALQKPL-EFGA  197 (405)
T ss_pred             CC------CCHHHHHHhcCcC-----CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcc-cccCCcc-cccC
Confidence            54      2567888888754     4666553  336999999999966 6999999999999987 7543333 3689


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      |++++|+|| ++|+|.+  .|+++.++
T Consensus       198 Divv~S~tK-~l~g~~~~~~G~vv~~~  223 (405)
T PRK08776        198 DLVLHSTTK-YINGHSDVVGGAVVARD  223 (405)
T ss_pred             CEEEecCce-eecCCCCceEEEEEeCC
Confidence            999999999 5554755  46665543

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.41  E-value=7.1e-12  Score=123.47  Aligned_cols=159  Identities=8%  Similarity=-0.047  Sum_probs=112.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +......++.++++|+++|++..   ++ +++++.|+..++.++ +++||+|+... .+...  .+...+++.|+++..+
T Consensus        61 r~~~p~~~~Le~~lA~l~G~~~~---~~-~~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v  135 (398)
T PRK07504         61 RYSNPTVDMFEKRMCALEGAEDA---RA-TASGMAAVTAAILCQ-VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV  135 (398)
T ss_pred             cCCCchHHHHHHHHHHHhCCCee---eE-ecCHHHHHHHHHHHH-hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE
Confidence            33334456899999999999632   44 678888887666554 57899987433 33321  2334455678888887


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.      ++.++++++++++     +++|.+...  -+|.+.|+++|.+ |+++|+++++|++|+. +...-.+ .+++
T Consensus       136 d~------~d~e~l~~ai~~~-----tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~-~~~~~~~-~~ga  202 (398)
T PRK07504        136 DG------LDLDNWEKAVRPN-----TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT-PLFQKPL-ELGA  202 (398)
T ss_pred             CC------CCHHHHHHhcCcC-----ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc-cccCCch-hhCC
Confidence            52      4788899988765     567766433  5899999999976 6999999999999987 6543333 4689


Q ss_pred             cEEEEccccCcCCCCC-ceEEEEEe
Q 021539          276 DLVLCTLDNNTHAQPL-KITCLLVR  299 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~-GiG~L~vr  299 (311)
                      |++++|+|| ++|+|. .+|.+++.
T Consensus       203 Divv~S~sK-~l~g~g~~~GG~vv~  226 (398)
T PRK07504        203 HIVVYSATK-HIDGQGRCLGGVVLS  226 (398)
T ss_pred             CEEEeeccc-cccCCccceEEEEEe
Confidence            999999999 665452 36655544

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.41  E-value=6e-12  Score=123.51  Aligned_cols=158  Identities=13%  Similarity=0.018  Sum_probs=111.8

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +......++.++.+|+++|++  +  ++.|++++.|+..++.++ +++||+|++.. .|..  ..++.+ +..|+++..+
T Consensus        49 r~~np~~~~lE~~lA~l~g~~--~--~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~  122 (385)
T PRK08574         49 REENPTLRPLEEALAKLEGGV--D--ALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLA  122 (385)
T ss_pred             CCCCccHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEE
Confidence            333334568999999999973  3  566788899999988876 67899987544 3432  223332 5568888765


Q ss_pred             eCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ..       +.+++++++++ +     +++|.+...  -+|.++|+++|.+ ||++|+++++|.+|+. |...-.+ .++
T Consensus       123 ~~-------d~~~l~~~i~~~~-----tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~G  188 (385)
T PRK08574        123 YP-------STEDIIEAIKEGR-----TKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFAT-PLLYRPL-RHG  188 (385)
T ss_pred             CC-------CHHHHHHhcCccC-----ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhC
Confidence            32       45778888875 3     567776533  4899999999966 6999999999999987 7432223 468


Q ss_pred             CcEEEEccccCcCCCCCc-e-EEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK-I-TCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G-i-G~L~vr~  300 (311)
                      +|++++|++| ++|+|.+ + |+++.++
T Consensus       189 aDivv~S~sK-~l~g~~d~~gG~vi~~~  215 (385)
T PRK08574        189 ADFVVHSLTK-YIAGHNDVVGGVAVAWS  215 (385)
T ss_pred             CcEEEeeCce-eecCCCCceeEEEEECc
Confidence            9999999999 6654754 3 4455543

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.41  E-value=7.3e-12  Score=123.28  Aligned_cols=161  Identities=13%  Similarity=0.028  Sum_probs=117.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.++.+|+++|++  .  +++|+|+|+|+++++.++ +++||+|++ ...|...  .+..+++..|+++..
T Consensus        60 ~r~~~pt~~~Le~~lA~l~g~~--~--~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~  134 (394)
T PRK07050         60 GLHATPTSLALAQRLAEIEGGR--H--ALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRF  134 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHhCCC--e--EEEeccHHHHHHHHHHHH-hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence            4444555678889999999973  3  999999999999999888 689999874 3344422  233455667999888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++..      +.+++++.++++     +++|.+..  +.+|.+.++++|.+ ||++|+++++|++|+. |.. .+--+++
T Consensus       135 vd~~------~~~~l~~~i~~~-----tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~-~~~-~~~l~~G  201 (394)
T PRK07050        135 YDPL------IGAGIADLIQPN-----TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA-GLA-FKPFEHG  201 (394)
T ss_pred             ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc-ccc-cCHHHcC
Confidence            7643      236788888765     56776643  35899999999976 6999999999999998 753 2323357


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +|+++.|+.| ++++..+  .|+++.++
T Consensus       202 aDi~v~S~tK-~~~g~~~~~gG~v~~~~  228 (394)
T PRK07050        202 VDISVQALTK-YQSGGSDVLMGATITAD  228 (394)
T ss_pred             CeEEEEECCc-eecCCCCeeEEEEEECC
Confidence            8999999999 5543434  45566543

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.41  E-value=8.4e-12  Score=121.22  Aligned_cols=161  Identities=10%  Similarity=-0.038  Sum_probs=117.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|+.  +  .++++++++|+.+++.++ .++||+|++. ..|+.  ..+...++..|+++..
T Consensus        35 ~r~~~p~~~~le~~la~l~g~~--~--a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~  109 (369)
T cd00614          35 SRIGNPTVDALEKKLAALEGGE--A--ALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF  109 (369)
T ss_pred             ECCCChhHHHHHHHHHHHHCCC--C--EEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence            4444455668889999999973  3  677788899999998887 5689998643 44552  2234445567988888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.++++++++++     +++|.+...  -+|.+.|+++|.+ ||++|+++++|.+++. |... ..-.++
T Consensus       110 v~~~------d~~~l~~~i~~~-----~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~-~~~~-~~~~~g  176 (369)
T cd00614         110 VDPD------DPEALEAAIKPE-----TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFAT-PYLQ-RPLELG  176 (369)
T ss_pred             eCCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-hhcC-ChhhhC
Confidence            8764      367888888754     567766533  5899999999966 6999999999999988 7542 222358


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +|++++|++| .+|+|..  .|+++.++
T Consensus       177 ~Divv~S~tK-~l~g~~~~~gG~v~~~~  203 (369)
T cd00614         177 ADIVVHSATK-YIGGHSDVIAGVVVGSG  203 (369)
T ss_pred             CcEEEeccce-eccCCCCceEEEEEeCc
Confidence            9999999999 6664532  67777765

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.40  E-value=8.9e-12  Score=123.07  Aligned_cols=160  Identities=13%  Similarity=-0.020  Sum_probs=117.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +.-....++.++++|++.|++  +  .++++|++.|+..++.++ +.+||+|++.. .+...  .+...++..|+++.++
T Consensus        66 r~~~p~~~~le~~lA~l~g~~--~--al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v  140 (403)
T PRK07810         66 RYGNPTVSMFEERLRLIEGAE--A--CFATASGMSAVFTALGAL-LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV  140 (403)
T ss_pred             CCCCchHHHHHHHHHHHhCCC--c--EEEECChHHHHHHHHHHH-hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE
Confidence            333344568899999999974  3  788888899998887776 57899987543 33322  2344556679999988


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+      +.++++++++++     +++|.+.  .+.+|.+.|+++|.+ ||++|+++++|.+++. |...-.+ .+++
T Consensus       141 d~~------d~~~l~~ai~~~-----tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~~~-~~ga  207 (403)
T PRK07810        141 DGE------DLSQWEEALSVP-----TQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFAT-PLLQRGL-PLGA  207 (403)
T ss_pred             CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hcCC
Confidence            652      678898888765     4666553  336999999999966 6999999999999997 7553333 3589


Q ss_pred             cEEEEccccCcCCCCCc---eEEEEEeCC
Q 021539          276 DLVLCTLDNNTHAQPLK---ITCLLVRRK  301 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G---iG~L~vr~~  301 (311)
                      |++++|++| ++|++ |   .|+++.+++
T Consensus       208 Divv~S~tK-~l~g~-g~~~gG~v~~~~~  234 (403)
T PRK07810        208 DVVVYSGTK-HIDGQ-GRVLGGAILGDRE  234 (403)
T ss_pred             cEEEccCCc-eecCC-cCceeEEEEeChH
Confidence            999999999 77634 5   466665554

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.40  E-value=9.1e-12  Score=122.07  Aligned_cols=158  Identities=9%  Similarity=-0.040  Sum_probs=111.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +......++.++++|++.|+.  .  .++++|++.|+++++..  +++||+|+.. ..+...  .+...+...|+++.++
T Consensus        46 r~~~p~~~~Le~~la~l~g~~--~--al~~~SG~~Al~~~l~~--l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v  119 (380)
T PRK06176         46 RSGNPTRFALEELIADLEGGV--K--GFAFASGLAGIHAVFSL--FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII  119 (380)
T ss_pred             CCCChhHHHHHHHHHHHhCCC--C--EEEECCHHHHHHHHHHH--cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc
Confidence            333334567888999999974  2  34556667899877753  4789998743 334322  2344456678888887


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +..      +.++++++++++     +++|.+  +.+.+|.+.|+++|.+ ||++|+++++|.+++. +....++ .+++
T Consensus       120 d~~------d~e~l~~ai~~~-----t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~-~~~~~p~-~~ga  186 (380)
T PRK06176        120 DTS------DLSQIKKAIKPN-----TKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT-PYYQNPL-LLGA  186 (380)
T ss_pred             CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCC
Confidence            642      578888888764     567665  3336999999999966 6999999999999997 6554444 4689


Q ss_pred             cEEEEccccCcCCCCCc-eEE-EEEe
Q 021539          276 DLVLCTLDNNTHAQPLK-ITC-LLVR  299 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G-iG~-L~vr  299 (311)
                      |++++|++| ++|+|.. +|. ++.+
T Consensus       187 Divv~S~tK-~l~g~~d~~gG~vv~~  211 (380)
T PRK06176        187 DIVVHSGTK-YLGGHSDVVAGLVTTN  211 (380)
T ss_pred             CEEEecCce-eccCCccceeeEEEec
Confidence            999999999 6654753 444 4443

>PLN02590 probable tyrosine decarboxylase

Probab=99.40  E-value=2.4e-11  Score=124.32  Aligned_cols=194  Identities=9%  Similarity=-0.048  Sum_probs=125.0

Q ss_pred             cchhHHHHhcC---CC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHHhc---CCCC--
Q 021539          105 EPSRLLDILSK---KT--SFK-GNFISIPEIQARNRALKHCGLSED-----EYLVLFVPNYKEAMLMIGES---YPFF--  168 (311)
Q Consensus       105 ~~~~l~~~l~~---~s--s~~-G~~~~~~le~aR~~IA~~Lga~~d-----ey~VvFTsnaTealnlv~~s---~~~~--  168 (311)
                      .++-+-|++..   ..  ++. +..++.++.++-+-+++++|.+.+     ...=+||+|+|+|+.+.+..   ...+  
T Consensus       143 ~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~  222 (539)
T PLN02590        143 VAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKV  222 (539)
T ss_pred             HHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhh
Confidence            45567777632   22  332 445555667899999999999753     12368999999997653222   1000  


Q ss_pred             --CC--CEEE-EccCcChHHHHHHHHhCCc---EEEEEeCCC-CCcccCHHHHHhhhhccCCCC-CceEEEEecc--ccc
Q 021539          169 --KG--NYYL-TIISEESDYIKGFAAQKES---KVIAAPETW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPVV--VNG  236 (311)
Q Consensus       169 --~G--d~Il-s~~eh~~~~~~~la~~~G~---~V~~vp~~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~~--~tG  236 (311)
                        .+  +-++ +...-|. ++...++-.|+   .|+.||++. .+++++.+.|++.|++..... ..-+|+.++-  .+|
T Consensus       223 g~~~~~~~vvy~S~~aH~-Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG  301 (539)
T PLN02590        223 GKTLLPQLVVYGSDQTHS-SFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA  301 (539)
T ss_pred             cccCCCCEEEEecCCchH-HHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence              11  2233 3332232 34444444566   588899874 257899999999997532111 1223333332  699


Q ss_pred             chhcHHHHHH-HHHCCcEEEecccccCccCcccC-----C-CCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          237 TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-----L-ALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       237 ~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-----l-~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      .+=||++|+. |+++|+++|||||-.. .....+     + .-..+|.+++++|| |++.|.++|+|++|+.
T Consensus       302 aiDpl~~Ia~i~~~~g~WlHVDaA~GG-~al~~~~~r~~~~Gie~ADSit~D~HK-~l~~p~~cg~llvr~~  371 (539)
T PLN02590        302 AVDPLVPLGNIAKKYGIWLHVDAAYAG-NACICPEYRKFIDGIENADSFNMNAHK-WLFANQTCSPLWVKDR  371 (539)
T ss_pred             ccCCHHHHHHHHHHhCCeEEEecchhh-hhhcChhhHHHhcCCccCCEEEECchh-hcCcCcCEEEEEecCH
Confidence            9999999977 6999999999998775 332221     1 11358999999999 5545999999999975

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.39  E-value=7.2e-12  Score=122.68  Aligned_cols=159  Identities=11%  Similarity=0.002  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...++.++.+|+++|+.  +  .++++|++.|+..++.++ +++||+|++... |..  ..+..+++..|+++..++.. 
T Consensus        61 pt~~~Le~~lA~l~G~~--~--al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~-  134 (386)
T PRK06767         61 PTVKLFEERMAVLEGGE--E--ALAFGSGMAAISATLIGF-LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME-  134 (386)
T ss_pred             cchHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC-
Confidence            33567899999999973  2  556667778998888777 578999875433 332  22334445567777666442 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL  279 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~  279 (311)
                           +.++++++++++     +++|.+..  +-+|.+.|+++|.+ ||++|+.+++|.+++. +....++. .++|+++
T Consensus       135 -----d~~~l~~~i~~~-----tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~pl~-~g~Div~  202 (386)
T PRK06767        135 -----TEADIENKIRPN-----TKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCS-PYLQRPLE-LGCDAVV  202 (386)
T ss_pred             -----CHHHHHHhhCcC-----ceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcc-cccCCchh-cCCcEEE
Confidence                 567888888764     56776643  35999999999966 6999999999999987 65555553 5899999


Q ss_pred             EccccCcCCCCCc--eEEEEEeCCCC
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +|++| ++|++.+  .|+++.+++.+
T Consensus       203 ~S~sK-~l~g~g~~~gG~v~~~~~~i  227 (386)
T PRK06767        203 HSATK-YIGGHGDVVAGVTICKTRAL  227 (386)
T ss_pred             ecCcc-eecCCCCceeEEEEeChHHH
Confidence            99999 6664643  57787776543

>PRK05968 hypothetical protein; Provisional

Probab=99.39  E-value=8.3e-12  Score=122.53  Aligned_cols=158  Identities=9%  Similarity=-0.048  Sum_probs=111.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~  201 (311)
                      ....++.++++|+++|++   +.++| +++|.|+.+++.++ +++||+|++ ...|...  .+...++..|+++.+++.+
T Consensus        62 ~p~~~~le~~lA~l~g~~---~av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~  136 (389)
T PRK05968         62 NPTVRAFEEMLAKLEGAE---DARGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR  136 (389)
T ss_pred             ChhHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC
Confidence            344678999999999995   23555 56678998877765 578999864 4444422  2344556679999888653


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                            +.+++++++ ++     +++|.+...  .++.+.|+++|.+ ||++|+++++|++++. +...-.+ .+++|++
T Consensus       137 ------d~~~l~~~i-~~-----tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~-~~~~~p~-~~g~Div  202 (389)
T PRK05968        137 ------DEEAVAKAL-PG-----AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWAS-PVFQRPI-TLGVDLV  202 (389)
T ss_pred             ------CHHHHHHhc-cc-----CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-hhccCch-hcCCcEE
Confidence                  567888777 33     467766433  4778889999966 6999999999999988 7432223 3588999


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ++|++| ++++|.+  .|+++.+++.
T Consensus       203 v~S~tK-~l~g~~~~~gG~i~~~~~~  227 (389)
T PRK05968        203 IHSASK-YLGGHSDTVAGVVAGSKEH  227 (389)
T ss_pred             Eeeccc-cccCCCCeEEEEEEECHHH
Confidence            999999 6665755  5777666543

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.39  E-value=9.9e-12  Score=121.79  Aligned_cols=176  Identities=17%  Similarity=0.043  Sum_probs=113.9

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHHhcC-----------CCC-CCCE-EE-EccCcChH
Q 021539          122 NFISIPEIQARNRALKHCGLSED-----EYLVLFVPNYKEAMLMIGESY-----------PFF-KGNY-YL-TIISEESD  182 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~d-----ey~VvFTsnaTealnlv~~s~-----------~~~-~Gd~-Il-s~~eh~~~  182 (311)
                      ..++.++.++-+-+++++|.+.+     +-.=+||+|+|+|+...+...           ... .++- ++ |...|.+ 
T Consensus        75 P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S-  153 (373)
T PF00282_consen   75 PAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS-  153 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH-
T ss_pred             cccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH-
Confidence            33444556899999999999722     234789999999986433211           000 1122 33 4444543 


Q ss_pred             HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCce-EEEEecc--cccchhcHHHHHH-HHHCCcEEEecc
Q 021539          183 YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKG-LFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       183 ~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~-LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDA  258 (311)
                       +...+.-.|+.++.||++. +++++.++|++.+.+......+. +|+.++-  .+|.+=|+++|.+ ++++++++||||
T Consensus       154 -~~Kaa~~lGlg~~~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDa  231 (373)
T PF00282_consen  154 -IEKAARILGLGVRKIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDA  231 (373)
T ss_dssp             -HHHHHHHTTSEEEEE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEE
T ss_pred             -HHHhcceeeeEEEEecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecc
Confidence             4445566799999999986 78999999998887532111122 2333322  5999999999977 589999999999


Q ss_pred             cccCccCc------ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          259 TGLVFGED------QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       259 aQsv~G~~------pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +-.. ...      +....-.++|-+++++|| |++.|.++|++++|++.
T Consensus       232 A~gg-~~~~~~~~~~~~~gi~~adSit~d~HK-~l~~P~~~~~~l~r~~~  279 (373)
T PF00282_consen  232 AYGG-SALLSPEYRHLLFGIERADSITIDPHK-WLGVPYGCGVLLVRDKS  279 (373)
T ss_dssp             TTGG-GGGGHCTTGGGGTTGGGESEEEEETTT-TTS-SSS-EEEEESSGG
T ss_pred             cccc-cccccccccccccccccccccccchhh-hhcCCccceeEEeeccc
Confidence            7654 211      222333469999999999 66669999999999864

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.38  E-value=9.1e-12  Score=122.43  Aligned_cols=162  Identities=8%  Similarity=-0.043  Sum_probs=117.1

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcCh--HHHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEES--DYIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~~V~~v  198 (311)
                      +......++.++++|+++|+.  .  .++++|++.|+.+++.++ +.+||+|++.. .|..  ..+...+...|+++.++
T Consensus        55 r~~~p~~~~le~~lA~l~g~~--~--av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v  129 (391)
T TIGR01328        55 RLGNPTVSNLEGRIAFLEGTE--A--AVATSSGMGAIAATLLTI-LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI  129 (391)
T ss_pred             CCCCchHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE
Confidence            333334567888999999984  2  677888889998888777 57899987443 3332  22344456679998888


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+      +.++++++++++     +++|.+.  .+-+|.+.|+++|.+ ||++|+++++|.+++. +...-.+ .+++
T Consensus       130 d~~------d~e~l~~~i~~~-----tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~~~-~~g~  196 (391)
T TIGR01328       130 NMA------IPEEVKAHIKDN-----TKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT-PMLTNPV-ALGV  196 (391)
T ss_pred             CCC------CHHHHHHhhccC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch-hccCCch-hcCC
Confidence            764      577888888764     5676653  235999999999976 6999999999999987 7554444 3589


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      |++++|++| ++|+|.+  .|+++.+++.
T Consensus       197 Divv~S~sK-~lgg~g~~~gG~v~~~~~l  224 (391)
T TIGR01328       197 DVVVHSATK-YIGGHGDVVAGLICGKAEL  224 (391)
T ss_pred             CEEEccccc-cccCCCCceEEEEEcCHHH
Confidence            999999999 7775643  4666655543

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.38  E-value=2.8e-11  Score=117.18  Aligned_cols=173  Identities=11%  Similarity=0.075  Sum_probs=115.5

Q ss_pred             hhHHHHhcCCCCcc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH
Q 021539          107 SRLLDILSKKTSFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI  184 (311)
Q Consensus       107 ~~l~~~l~~~ss~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~  184 (311)
                      ..+.+.+....-.. |...    ++-.+++++++|+.  .  ++.|+|+|.|+.+++.++.+++|++|+ +.+... ..+
T Consensus         9 ~~v~~~l~s~~~~~~g~~~----~~fE~~~a~~~g~~--~--~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~-~~~   79 (363)
T PF01041_consen    9 DAVLEVLRSGWLSTYGPYV----EEFEKEFAEYFGVK--Y--AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP-ATA   79 (363)
T ss_dssp             HHHHHHHHHTCCSSSSHHH----HHHHHHHHHHHTSS--E--EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T-HHH
T ss_pred             HHHHHHHHhCCccCCCHHH----HHHHHHHHHHhCCC--e--EEEeCChhHHHHHHHHhcCCCcCceEecCCCcch-HHH
Confidence            34556664432222 4444    46777899999973  2  899999999999999999888999986 444433 222


Q ss_pred             HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      .. ....|+++++++++..++.+|++.++++++++     ++.|.+.| ..|...++++|.+ |+++|+.++-||+|++ 
T Consensus        80 ~a-i~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-----t~ai~~~h-~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~-  151 (363)
T PF01041_consen   80 SA-ILWAGAEPVFVDIDPETLNIDPEALEKAITPK-----TKAILVVH-LFGNPADMDAIRAIARKHGIPLIEDAAQAF-  151 (363)
T ss_dssp             HH-HHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-----EEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTT-
T ss_pred             HH-HHHhccEEEEEeccCCcCCcCHHHHHHHhccC-----ccEEEEec-CCCCcccHHHHHHHHHHcCCcEEEcccccc-
Confidence            22 23469999999998768999999999999976     45555554 4899999999966 7999999999999999 


Q ss_pred             cCcccC--CCCCCCcEEEEccc--cCcCCCCCce-EEEEEeC
Q 021539          264 GEDQLA--LALHRPDLVLCTLD--NNTHAQPLKI-TCLLVRR  300 (311)
Q Consensus       264 G~~pld--l~~l~~Dfl~~S~H--K~l~G~P~Gi-G~L~vr~  300 (311)
                      |..--.  +.. --|+.+||+|  | .+.  .|- |+++.++
T Consensus       152 g~~~~g~~~G~-~gd~~~fSf~~~K-~i~--~geGG~v~~~~  189 (363)
T PF01041_consen  152 GARYKGRPVGS-FGDIAIFSFHPTK-IIT--TGEGGAVVTND  189 (363)
T ss_dssp             T-EETTEETTS-SSSEEEEESSTTS-SS---SSS-EEEEEST
T ss_pred             CceeCCEeccC-CCCceEecCCCCC-CCc--CCCCeeEEecH
Confidence            853222  222 2499999997  7 553  344 5555543

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.37  E-value=1.4e-11  Score=120.05  Aligned_cols=148  Identities=14%  Similarity=0.047  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC-hH-HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE-SD-YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~-~~-~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ...+.++++|++.  . ++  .++++|+++|++.++.++ +++||+|++.. .+. .. ..+...++.|+++..++.+. 
T Consensus        52 ~~~~Le~~lA~l~--~-~~--~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~-  124 (366)
T PRK07582         52 TWRALEAALGELE--G-AE--ALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG-  124 (366)
T ss_pred             cHHHHHHHHHHHc--C-CC--EEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC-
Confidence            3457888899998  2 23  666777789999998887 68999987543 333 11 12233455799999998753 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccccc--CccCcccCCCCCCCcEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGL--VFGEDQLALALHRPDLV  278 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQs--v~G~~pldl~~l~~Dfl  278 (311)
                      +.    +    .+.++     ++||.+...  -+|.+.|+++|.+ ||++|+.++||++++  . |..|++   +++|++
T Consensus       125 ~~----~----~~~~~-----t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~-~~~p~~---~g~Div  187 (366)
T PRK07582        125 MA----E----AALAG-----ADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL-GQRPLE---LGADLV  187 (366)
T ss_pred             hH----H----HhccC-----ceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc-ccCchh---cCCcEE
Confidence            11    1    12222     467665422  4899999999966 699999999999975  5 767776   478999


Q ss_pred             EEccccCcCCCCCce--EEEEEe
Q 021539          279 LCTLDNNTHAQPLKI--TCLLVR  299 (311)
Q Consensus       279 ~~S~HK~l~G~P~Gi--G~L~vr  299 (311)
                      +.|+|| ++++|.|+  |+++.+
T Consensus       188 v~S~sK-~l~G~~g~~~G~v~~~  209 (366)
T PRK07582        188 VASDTK-ALTGHSDLLLGYVAGR  209 (366)
T ss_pred             Eecccc-cccCCCCeeEEEEEcC
Confidence            999999 55448784  777765

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.37  E-value=8.2e-12  Score=122.19  Aligned_cols=169  Identities=16%  Similarity=0.132  Sum_probs=124.6

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEE--EEccCcChHHHHHHHHhCCcE
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYY--LTIISEESDYIKGFAAQKESK  194 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~I--ls~~eh~~~~~~~la~~~G~~  194 (311)
                      |+.+......++++++.+-++|+++ ++|.|+|.+ |+|.++..+..++ +.+|+.+  +...++.+..+...+++.| +
T Consensus        41 sHRs~~F~~i~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~~~ea~~~Nl-l~~g~~~~~~~~tG~fg~r~~~ea~~~g-~  117 (364)
T PRK12462         41 SHRSSWFSSLLAQAEADLRDLLGIP-DEYGVVFLQGGSSLQFSMIPMNF-SRPGAAAPEYVTTGYWSRKAIGEASRVA-A  117 (364)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEeccHHHHHHHHHHHc-CCCCCcEEEEEeCCHHHHHHHHHHHhcC-C
Confidence            5567777888899999999999995 567788776 5999999998887 3567744  3445555666666666666 5


Q ss_pred             EEEEeCCCC---CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccC
Q 021539          195 VIAAPETWL---DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       195 V~~vp~~~~---~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld  269 (311)
                      |..+...+.   ...++.++++  +.++     ...|.++++  ++|+.+|  ++  .+.+++++++|++.++ |..|+|
T Consensus       118 v~~~~~~~~~~~~~~p~~~~~~--~~~d-----~~~v~~t~NETstGv~~~--~~--~~~~~~llvvD~sS~~-~s~pid  185 (364)
T PRK12462        118 MRVVWDGAASGYRTLPSLAELD--WDAR-----APFRHYVSNETVEGLQFP--DA--AGLPDSPLIADMSSDF-MSRPFD  185 (364)
T ss_pred             ceEecCcCCCCCCcCCCHHHhc--cCCC-----CcEEEEccCCCCceEecC--cc--cccCCCeEEEEcCchh-hCCCCC
Confidence            555432111   1233444431  1222     457888888  6899997  22  2335899999999999 999999


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++++  |.+.++.+| -+| |.|++++++|+++++.
T Consensus       186 ~~~~--dvi~agsQK-nlg-P~Gltvvivs~~al~~  217 (364)
T PRK12462        186 VEAY--GMVYAHAQK-NLG-PAGVTVAIIRRALLER  217 (364)
T ss_pred             hHHc--cEEEeeccc-cCC-CCceEEEEECHHHHhh
Confidence            9976  999999999 889 9999999999988765

>PRK06460 hypothetical protein; Provisional

Probab=99.36  E-value=1.2e-11  Score=121.02  Aligned_cols=163  Identities=12%  Similarity=-0.001  Sum_probs=113.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-h-HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-S-DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-~-~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|+..   .++|++| ++|++.++.++ +++||+|+.... +. . ..+...++..|+++..
T Consensus        40 ~r~~~p~~~~L~~~lA~l~g~~~---~v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~  114 (376)
T PRK06460         40 SREANPTVLELTKKIVELENAEM---GVAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDA  114 (376)
T ss_pred             eCCCCccHHHHHHHHHHHhCCCc---EEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence            56666667899999999999952   4888665 68999988877 578999875321 11 1 1233445667999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+.      .+.+++.++++     +++|.+...  -+|.++|+++|.+ ||++|+++++|.+++. +.....+ ..+
T Consensus       115 ~~~~~------~~~l~~~~~~~-----tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~-~~~~~~l-~~~  181 (376)
T PRK06460        115 SNPGS------DNIIEKAKSKR-----YDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFST-PINQKPL-ELG  181 (376)
T ss_pred             ECCCC------HHHHHHhcCCC-----ceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCc-cccCChh-hcC
Confidence            87642      23344444433     567766543  5999999999966 6999999999999987 6322222 357


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +|+++.|++| ++|++.|  .|+++.++++
T Consensus       182 ~divv~S~sK-~l~G~~~~~~G~~~~~~~l  210 (376)
T PRK06460        182 ADIVVHSASK-FLAGHNDVIAGLAAGYGKL  210 (376)
T ss_pred             CCEEEeecce-eccCCCCceEEEEecCHHH
Confidence            8999999999 6764543  6777665543

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.36  E-value=5.6e-11  Score=118.73  Aligned_cols=159  Identities=10%  Similarity=0.065  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKGNYYLT-IISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ..+-++.+|+++|++  .  +++|+|+|+|+.+++.++        .+.+||+|++ ..+|... . ......|++++++
T Consensus        65 ~~~fe~~lA~~~g~~--~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~-~-~~v~~~G~~pv~v  138 (438)
T PRK15407         65 NDAFEKKLAEFLGVR--Y--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTT-V-NPIIQNGLVPVFV  138 (438)
T ss_pred             HHHHHHHHHHHhCCC--e--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHH-H-HHHHHcCCEEEEE
Confidence            347889999999984  3  899999999999888765        4578999864 4454422 2 1223468999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccC--CCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--LALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l~~l~~  275 (311)
                      +++..+..+|.+.+++.+.++     +++|.+.+ ..|...++++|.+ |+++|+++++|++|++ |...-+  +..++ 
T Consensus       139 dvd~~~~~id~~~le~~i~~~-----tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~-G~~~~g~~~G~~g-  210 (438)
T PRK15407        139 DVELPTYNIDASLLEAAVSPK-----TKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDAL-GSTYDGRMTGTFG-  210 (438)
T ss_pred             ecCCCcCCcCHHHHHHHcCcC-----CeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccch-hhhcCCeeeeccC-
Confidence            887546678999999988764     56666655 3888899999966 6999999999999999 976644  33343 


Q ss_pred             cEEEEccccC--cCCCCCceEEEEEeCCC
Q 021539          276 DLVLCTLDNN--THAQPLKITCLLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~--l~G~P~GiG~L~vr~~~  302 (311)
                      |+.+||+|..  +-.++ | |+|+.+++.
T Consensus       211 d~~~fSf~~~k~~~~ge-G-G~l~t~d~~  237 (438)
T PRK15407        211 DIATLSFYPAHHITMGE-G-GAVFTNDPL  237 (438)
T ss_pred             ceEEEeCCCCCCccccC-c-eEEEECCHH
Confidence            9999998842  43323 5 788876543

>PLN02509 cystathionine beta-lyase

Probab=99.34  E-value=3.7e-11  Score=121.02  Aligned_cols=155  Identities=12%  Similarity=0.011  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..++..+.+|++.|..   + ++++++++.++.++.. + +++||+|+.. ..+..  ..+.....+.|+++..++..  
T Consensus       134 t~~aLE~~lA~leg~e---~-ai~~~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~--  205 (464)
T PLN02509        134 TRDALESLLAKLDKAD---R-AFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT--  205 (464)
T ss_pred             HHHHHHHHHHHHhCCC---E-EEEeCcHHHHHHHHHH-H-hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC--
Confidence            3567778889998863   2 4444555788876664 3 5789998743 33432  12334455679988877532  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                          +.++++++++++     +++|.+...  -+|.+.|+++|.+ ||++|+++++|.||+. |....++ .+++|++++
T Consensus       206 ----d~e~l~~ai~~~-----TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~-~~~~~pl-~~gaDivv~  274 (464)
T PLN02509        206 ----NLDEVAAAIGPQ-----TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMS-PVLSRPL-ELGADIVMH  274 (464)
T ss_pred             ----CHHHHHHhCCcC-----CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccc-cccCChh-hcCCcEEEe
Confidence                568888888764     567766544  5899999999966 6999999999999998 8654444 368999999


Q ss_pred             ccccCcCCCCCc--eEEEEEeCC
Q 021539          281 TLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       281 S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      |++| ++++|.+  .|+++++++
T Consensus       275 S~tK-~l~G~gdv~gG~v~~~~~  296 (464)
T PLN02509        275 SATK-FIAGHSDVMAGVLAVKGE  296 (464)
T ss_pred             cCcc-cccCCCccceeEEEeccH
Confidence            9999 5554766  677777654

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.33  E-value=1.7e-11  Score=117.57  Aligned_cols=161  Identities=12%  Similarity=0.071  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+.|+.+|+++|+++++  |++|+|+++++++++.++ +++|+.|+... +.-......++..|+++..+|.+  +..++
T Consensus        70 ~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~l-~~~gd~vl~~~-p~y~~~~~~~~~~g~~~~~~~~~--~~~~~  143 (367)
T PRK02731         70 FELKAALAEKFGVDPER--IILGNGSDEILELLARAY-LGPGDEVIYSE-HGFAVYPIAAQAVGAKPVEVPAK--DYGHD  143 (367)
T ss_pred             HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEec-CCHHHHHHHHHHcCCeEEEeccc--CCCCC
Confidence            47999999999997654  999999999999999887 56889886432 11122233345679999998884  45689


Q ss_pred             HHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH--CCcEEEecccccCccC------cccCCCCC-CCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVFGE------DQLALALH-RPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G~------~pldl~~l-~~D  276 (311)
                      .+++++.++++     +++|.++..  -||.++|.+++.+ ++.  +|+++++|.++.. ..      ..+++-.. .-.
T Consensus       144 ~~~l~~~~~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~  217 (367)
T PRK02731        144 LDAMLAAVTPR-----TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAE-YVRRKDYEDGLELVAKFPNV  217 (367)
T ss_pred             HHHHHHHhCCC-----CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHH-hccCcCcccHHHHHhhcCCE
Confidence            99999888754     466666533  5999999999966 444  4899999999763 21      11221111 224


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +++.|+-| .|| ..|  +|+++.+++..
T Consensus       218 i~~~S~SK-~~g-~~G~RiG~l~~~~~~~  244 (367)
T PRK02731        218 VVTRTFSK-AYG-LAGLRVGYGIAPPEII  244 (367)
T ss_pred             EEEeeehH-hhc-CcccceeeeeCCHHHH
Confidence            55667789 887 446  69999887554

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.33  E-value=3.3e-11  Score=121.11  Aligned_cols=173  Identities=10%  Similarity=0.031  Sum_probs=118.2

Q ss_pred             cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCc
Q 021539          114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKES  193 (311)
Q Consensus       114 ~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~  193 (311)
                      ...+.|.+..-.   .+.|+.|+++++..  .  |++|+|+|+|++++..++ +++|| |+...-|.... ....+..|.
T Consensus        69 ~g~~~Y~~~~g~---~~Lreaia~~~~~~--~--vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~~-~~~i~~~G~  138 (460)
T PRK13238         69 RGDEAYAGSRSY---YRLEDAVKDIFGYP--Y--TIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDTT-RAHIELNGA  138 (460)
T ss_pred             hCCcccCCCCCH---HHHHHHHHHHhCCC--c--EEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccch-HHHHHHcCC
Confidence            445667655432   46888999999973  3  999999999999998887 68999 65433343221 122334689


Q ss_pred             EEEEEeCCCC---------CcccCHHHHHhhhhccCCCCCceEEEEe--ccccc-chhcH---HHHHH-HHHCCcEEEec
Q 021539          194 KVIAAPETWL---------DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNG-TRYSM---HWISE-AHRNAWHVLLD  257 (311)
Q Consensus       194 ~V~~vp~~~~---------~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG-~i~Pi---~~I~~-a~~~g~~vlvD  257 (311)
                      +++.+|.+..         .|.+|.++|++.+.++.. .++++|.+.  ++.+| ...+.   ++|.+ |+++|++++.|
T Consensus       139 ~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~-~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D  217 (460)
T PRK13238        139 TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA-ENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID  217 (460)
T ss_pred             EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC-CceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence            9999887521         355999999999985311 125666654  34565 77665   45655 68999999999


Q ss_pred             ccccCcc-----------CcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          258 ATGLVFG-----------EDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       258 AaQsv~G-----------~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ++|.. +           ....++.+      .-.|++++|+||+.+| |.| |+++.++
T Consensus       218 aa~~~-e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d  274 (460)
T PRK13238        218 AARFA-ENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRD  274 (460)
T ss_pred             Ccchh-hhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcCh
Confidence            99965 3           22333321      2489999999994445 876 8877774

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.32  E-value=1.5e-10  Score=116.00  Aligned_cols=169  Identities=12%  Similarity=0.051  Sum_probs=115.2

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHH-HHHHHHHhcCCCC--CCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYK-EAMLMIGESYPFF--KGNYYL-TIISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaT-ealnlv~~s~~~~--~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .....+....+++++|++.-+ ..++++++| .++.+++.++..+  +|+.|+ +...|. ...+ .+...|++.++++.
T Consensus       104 ~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~-S~~k-Ai~~~G~~pv~Vd~  180 (444)
T TIGR03531       104 YKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQK-SCIK-AISTAGFEPRVIET  180 (444)
T ss_pred             HHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChH-HHHH-HHHHcCCeEEEeee
Confidence            344567888899999996322 488999999 5777777766532  578875 445543 2222 23445999999884


Q ss_pred             --CCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc-CC--C
Q 021539          201 --TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL-AL--A  271 (311)
Q Consensus       201 --~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl-dl--~  271 (311)
                        +.++..+|+++|+++|++.+.  ...++.+. ..  ..|..-|+++|++ |+++|+++|+|++++. +...+ ++  .
T Consensus       181 ~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~-~~~~~~~~~~~  257 (444)
T TIGR03531       181 VLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGL-QSNKYMELINK  257 (444)
T ss_pred             eecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcC-cChhhhhhhhc
Confidence              444678999999999985321  12333332 22  1357899999976 6999999999999998 65332 11  1


Q ss_pred             --CC-CCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          272 --LH-RPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       272 --~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                        .. ++|++++|.|| ++..|.+.|+++.++
T Consensus       258 g~~~Grad~vv~s~hK-~l~~pg~Gg~I~~~d  288 (444)
T TIGR03531       258 AIKVGRVDAVVSSTDK-NFMVPVGGAIIYSFD  288 (444)
T ss_pred             cccccCCCeEEEeCcc-CCCCCCCEEEEEECC
Confidence              12 47999999999 555487777777754

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.32  E-value=4e-11  Score=119.37  Aligned_cols=160  Identities=13%  Similarity=0.038  Sum_probs=113.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|++.|+.  .  .++++|+++|+.+++.++ +++||+|++. ..++..  .+.......|+++.+
T Consensus        53 ~r~~~pt~~~Le~~lA~l~g~~--~--~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~  127 (425)
T PRK06084         53 TRIMNPTNDVLEQRVAALEGGV--G--ALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRF  127 (425)
T ss_pred             cCCCCchHHHHHHHHHHHhCCC--c--eeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence            3434444568899999999963  2  667888889999998887 4689998743 333311  122222335777776


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.      .+.++++++++++     +++|.+..  +.+|.+.|+++|.+ ||++|+++++|.+|+. |...-.+ .++
T Consensus       128 ~d~------~d~e~le~ai~~~-----tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~-~~~~~p~-~~g  194 (425)
T PRK06084        128 AAH------DDIAALEALIDER-----TKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVAT-PVLCRPF-EHG  194 (425)
T ss_pred             ECC------CCHHHHHHHhccC-----CcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcC
Confidence            654      2678898888765     45665542  36999999999966 6999999999999997 7554333 478


Q ss_pred             CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539          275 PDLVLCTLDNNTHAQPL-KITCLLVR  299 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~-GiG~L~vr  299 (311)
                      +|++++|++| ++|+|. .+|++++.
T Consensus       195 aDivv~S~tK-~l~G~g~~~gG~v~~  219 (425)
T PRK06084        195 ADIVVHSLTK-YIGGHGTSIGGIVVD  219 (425)
T ss_pred             CCEEEECchh-cccccccceeEEEEe
Confidence            9999999999 665463 35777775

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.31  E-value=4e-11  Score=113.35  Aligned_cols=159  Identities=14%  Similarity=0.100  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.++++++.+ +  .|++|+|++ ++..++.++ +++||.|+. ...|. ..+. .++..|.++..++.    
T Consensus        61 ~~~~~l~~~la~~~~~~-~--~i~~~~G~~-~~~~~l~~~-~~~gd~v~~~~~~~~-~~~~-~~~~~g~~~~~~~~----  129 (360)
T TIGR00858        61 PLHEELEEELAEWKGTE-A--ALLFSSGYL-ANVGVISAL-VGKGDLILSDALNHA-SLID-GCRLSGARVRRYRH----  129 (360)
T ss_pred             HHHHHHHHHHHHHhCCC-C--EEEECchHH-HHHHHHHHh-CCCCCEEEEEccccH-HHHH-HHHhcCCceEEecC----
Confidence            34678999999999963 2  477777754 444455665 578998864 33443 2222 23445888777653    


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---------CCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---------LAL  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---------l~~  272 (311)
                        ++.+.|++.++.... .++.++.+...  .+|.+.|+++|.+ |+++|+++++|.+|+. |..+.+         +..
T Consensus       130 --~d~~~l~~~~~~~~~-~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~  205 (360)
T TIGR00858       130 --NDVEHLERLLEKNRG-ERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGT-GVLGEDGRGTLEHFGLKP  205 (360)
T ss_pred             --CCHHHHHHHHHHccc-CCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccc-cCcCCCCCchHHhcCCCc
Confidence              367888888875310 12467766554  5899999999966 6999999999999987 754322         223


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      .+.|+++.|++| +|| |.| |+++.+++.
T Consensus       206 ~~~~i~i~s~sK-~~~-~~g-G~~~~~~~~  232 (360)
T TIGR00858       206 EPVDIQVGTLSK-ALG-SYG-AYVAGSQAL  232 (360)
T ss_pred             cCCcEEEEechh-hhh-ccC-cEEEcCHHH
Confidence            467999999999 888 667 887776543

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.31  E-value=1.8e-11  Score=117.06  Aligned_cols=162  Identities=12%  Similarity=0.020  Sum_probs=115.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++.|+.+|+++|+++++  |++ |+|+++++++++.++ .++|+.|+...-+... +...++..|+++..+|.+. ++.+
T Consensus        72 ~~lr~~ia~~~~~~~~~--i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~y~~-~~~~~~~~g~~~~~~~~~~-~~~~  146 (361)
T PRK00950         72 PELREALSKYTGVPVEN--IIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPTFSY-YEISAKAHGAKPVYAKREE-DFSL  146 (361)
T ss_pred             HHHHHHHHHHhCCCHHH--EEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCChHH-HHHHHHHcCCEEEEeecCC-CCCc
Confidence            68999999999998765  888 789999999988877 4688988644322222 2333556799999998654 5578


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCc--ccCC-CCCCCcEEEEc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--QLAL-ALHRPDLVLCT  281 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--pldl-~~l~~Dfl~~S  281 (311)
                      +.+++++.++++     ++++.++.  +-||.++|++++.+ ++++|+++++|.++.- -..  ...+ ...+--+++.|
T Consensus       147 ~~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~S  220 (361)
T PRK00950        147 DVDSVLNAITEK-----TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGRT  220 (361)
T ss_pred             CHHHHHHHhccC-----CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEEe
Confidence            999998888654     45655542  25999999999966 6889999999999964 211  1111 11222366679


Q ss_pred             cccCcCCCCCc--eEEEEEeCCCC
Q 021539          282 LDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       282 ~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.| .|| ..|  +|+++..++..
T Consensus       221 ~SK-~~g-~~GlRiG~~~~~~~~~  242 (361)
T PRK00950        221 FSK-VFG-LAGLRIGYGFVPEWLI  242 (361)
T ss_pred             ehH-hhc-CchhhcchhcCCHHHH
Confidence            999 888 447  78888765543

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.29  E-value=1.3e-10  Score=113.68  Aligned_cols=160  Identities=10%  Similarity=-0.035  Sum_probs=110.8

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.++.+|++.|+..    .++++|++.++..+.. + +++||+|+.. ..+...  .+..++.+.|+++..
T Consensus        45 ~r~~~p~~~~Le~~lA~l~g~~~----~~~~~sG~aai~~~~~-~-l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~  118 (377)
T PRK07671         45 SRTGNPTRAALEELIAVLEGGHA----GFAFGSGMAAITAVMM-L-FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTF  118 (377)
T ss_pred             CCCCChHHHHHHHHHHHHhCCCc----eEEeCCHHHHHHHHHH-H-hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence            34444456689999999999842    3456666778876653 3 4689998643 334322  223344567999888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++..      +.++++++++++     +++|.+  +.+.+|.+.|+++|.+ +|++|+++++|.+++. +...-.+ .++
T Consensus       119 v~~~------d~~~l~~ai~~~-----tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~-~~~~~p~-~~g  185 (377)
T PRK07671        119 VDTS------NLEEVEEAIRPN-----TKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT-PYWQSPI-SLG  185 (377)
T ss_pred             ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhC
Confidence            8642      678898888765     466665  3346899999999976 6999999999999976 5433223 368


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +|++++|++| ++|+|.+  .|++++++
T Consensus       186 ~Divv~S~sK-~l~G~~~~~~G~~v~~~  212 (377)
T PRK07671        186 ADIVLHSATK-YLGGHSDVVAGLVVVNS  212 (377)
T ss_pred             CeEEEecCcc-cccCCccceeEEEEeCc
Confidence            8999999999 6665864  34555544

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.29  E-value=6.9e-11  Score=116.48  Aligned_cols=157  Identities=11%  Similarity=-0.016  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ...+.++++|++.|.+  +  +++++|+++|+..++.++ +++||+|++ ...|...  .+...++..|+++.+++..  
T Consensus        65 ~~~~Le~~iA~~~g~~--~--~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--  137 (400)
T PRK06234         65 TSTEVENKLALLEGGE--A--AVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS--  137 (400)
T ss_pred             cHHHHHHHHHHHhCCC--c--EEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence            3458899999999973  3  788889999998877766 578999864 3344422  1233345679999888753  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCCCCCcEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                          +.+++++.++++     +++|.+..  +-+|.+.|+++|.+ +|++  |+++++|.+++. +.....+ .+++|++
T Consensus       138 ----d~e~l~~~i~~~-----tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~-~~~~~~l-~~g~Div  206 (400)
T PRK06234        138 ----NLEEVRNALKAN-----TKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCT-PYIQRPL-QLGADVV  206 (400)
T ss_pred             ----CHHHHHHHhccC-----CeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCc-hhcCCch-hhCCcEE
Confidence                578888888765     46666543  35999999999966 6875  999999999988 7544333 3589999


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ++|++| ++|+|..  .|+++.+++.
T Consensus       207 v~S~sK-~l~g~g~~~gG~v~~~~~~  231 (400)
T PRK06234        207 VHSATK-YLNGHGDVIAGFVVGKEEF  231 (400)
T ss_pred             Eeeccc-cccCCCCceeEEEEecHHH
Confidence            999999 6663522  4888777654

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.29  E-value=6.8e-11  Score=110.98  Aligned_cols=168  Identities=14%  Similarity=0.146  Sum_probs=129.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC-CCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET-WLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~-~~~g  205 (311)
                      +.+--+.+|+|||++  +  +=+|.||.||=-.+-.++. ++||.|+... .|.+..+  .|++.|.+|..+|.. .++-
T Consensus        63 I~~F~~dlaeFlg~D--~--~R~t~GARe~KfavMhal~-~~gd~vV~D~~aHYttyv--AAEragl~v~eVp~tg~Pey  135 (382)
T COG1103          63 IKDFLEDLAEFLGMD--E--VRVTAGAREAKFAVMHALC-KEGDWVVVDSLAHYTTYV--AAERAGLNVAEVPNTGYPEY  135 (382)
T ss_pred             HHHHHHHHHHHhCCc--e--eeecccchhhHHHHHHHhc-cCCCEEEEcCcchHHHHH--HHHhcCCeEEecCCCCCCce
Confidence            445566699999995  4  7899999999877777774 6789886443 3444444  256679999999953 3556


Q ss_pred             ccCHHHHHhhhhccCCC--CCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          206 RIKGSQLSQNFRRKCKY--TPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~--~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                      .|+++...+.|.+-.++  .+..|..++++  .-|.+.|.+.|+. ||++|+++++.+|=.+ |..|++..+.++||++.
T Consensus       136 ~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~-Grmpvs~ke~g~DFiVg  214 (382)
T COG1103         136 KITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTV-GRMPVSGKEIGADFIVG  214 (382)
T ss_pred             EecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceee-ccccccccccCCCEEEe
Confidence            78888777666531111  23567777887  6899999999977 6999999999999999 99999999999999999


Q ss_pred             ccccCcCCCCCceEEEEEeCCCCc
Q 021539          281 TLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |+||+|-. -.=+|+|-++.++.+
T Consensus       215 SGHKsmAA-s~PiGvl~~~eE~ae  237 (382)
T COG1103         215 SGHKSMAA-SAPIGVLAMSEEWAE  237 (382)
T ss_pred             cCccchhc-cCCeeEEeehhHHHH
Confidence            99997653 223999999877654

>PRK07908 hypothetical protein; Provisional

Probab=99.28  E-value=7.8e-11  Score=112.77  Aligned_cols=155  Identities=14%  Similarity=0.086  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC--hHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE--SDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~--~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..+.|+.||+++|+++++  |++|+|+++++++++. +  .+|+.++.   ++  ...+ ..++..|.++..+|.+. +.
T Consensus        60 ~~~lr~aia~~~~~~~~~--I~it~Ga~~al~~~~~-l--~~~~viv~---~P~y~~~~-~~~~~~G~~i~~v~~~~-~~  129 (349)
T PRK07908         60 ERRARAAVAARHGRTPDE--VLLLAGAAEGFALLAR-L--RPRRAAVV---HPSFTEPE-AALRAAGIPVHRVVLDP-PF  129 (349)
T ss_pred             hHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHh-c--CCCeEEEe---CCCChHHH-HHHHHcCCEEEeeccCc-cc
Confidence            357999999999998765  9999999999999988 4  45554442   23  2222 34566799999999874 34


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHHHHHCCcEEEeccccc--CccCcccCCCCCC-CcEEEE
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISEAHRNAWHVLLDATGL--VFGEDQLALALHR-PDLVLC  280 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~a~~~g~~vlvDAaQs--v~G~~pldl~~l~-~Dfl~~  280 (311)
                      .++.+.+    +++     ++++.++.  +-||+++|.++|.++.+++.++++|.+++  + ...+.++.... .+++++
T Consensus       130 ~~d~~~l----~~~-----~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~-~~~~~~l~~~~~~~~i~i  199 (349)
T PRK07908        130 RLDPAAV----PDD-----ADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAV-PGEPESLAGDDLPGVLVL  199 (349)
T ss_pred             CcChhHh----ccC-----CCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhc-cCCccccccccCCCEEEE
Confidence            5666643    332     35665542  25999999999976534588899999985  3 22344443222 255555


Q ss_pred             -ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          281 -TLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       281 -S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                       |++| .|| +.|  +|+++.++++.+
T Consensus       200 ~S~SK-~~~-l~GlRiG~~~~~~~~~~  224 (349)
T PRK07908        200 RSLTK-TWS-LAGLRVGYALGAPDVLA  224 (349)
T ss_pred             eeccc-ccC-CccceeeeeecCHHHHH
Confidence             9999 888 446  599998776544

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.27  E-value=9.9e-11  Score=114.04  Aligned_cols=167  Identities=9%  Similarity=0.026  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          126 IPEIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ...+..++.+++++|++.+ +++|++|+|+++++..++.++ +.+||.|++. -.+...  ...++..|++++.+|.+. 
T Consensus        69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~-  144 (389)
T PRK05957         69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI-TDPGDEIILNTPYYFNH--EMAITMAGCQPILVPTDD-  144 (389)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEeecCC-
Confidence            4456788888888897533 346999999999999888877 5789988643 332211  122345699999999874 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc--c---Ccc-cCC-
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--G---EDQ-LAL-  270 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G---~~p-ldl-  270 (311)
                      +..++.+.+++.++++     +++|.+++.  -||.++|   +++|.+ |+++|+++++|.+..-.  +   +.+ ..+ 
T Consensus       145 ~~~~d~~~l~~~i~~~-----~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~  219 (389)
T PRK05957        145 NYQLQPEAIEQAITPK-----TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIP  219 (389)
T ss_pred             CCCcCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCC
Confidence            5678999999988754     456666533  5999999   666644 68999999999985410  1   111 111 


Q ss_pred             CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ....--+++.|+=| .|| +.|  +|++++.+++.
T Consensus       220 ~~~~~~i~~~S~SK-~~g-~~GlRiG~~~~~~~~~  252 (389)
T PRK05957        220 GSGNHTISLYSLSK-AYG-FASWRIGYMVIPIHLL  252 (389)
T ss_pred             CccCcEEEEecchh-hcc-CccceeEEEecCHHHH
Confidence            11122366777779 888 558  99999876554

>PRK08960 hypothetical protein; Provisional

Probab=99.26  E-value=1.1e-10  Score=113.36  Aligned_cols=163  Identities=13%  Similarity=0.109  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      +++++  |++|+|+++|+++++..+ +.+||.|+. ..++...  ...++..|.+++.+|++
T Consensus        72 ~~lr~~ia~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~~--~~~~~~~g~~~~~v~~~  146 (387)
T PRK08960         72 PALREAIAGFYAQRYGVDVDPER--ILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPCN--RHFLRLVEGAAQLVPVG  146 (387)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhh--EEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch--HHHHHhcCCeEEEEecC
Confidence            478999999874      56554  999999999999999888 578999863 4444422  12334458899999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc--cCcccCCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF--GEDQLALAL  272 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~--G~~pldl~~  272 (311)
                      .+ +..++.++++++++++     ++++.+  +++-||.++|.+++.   + |+++|+++++|.+..-.  +.....+..
T Consensus       147 ~~~~~~~d~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~  221 (387)
T PRK08960        147 PDSRYQLTPALVERHWNAD-----TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLE  221 (387)
T ss_pred             cccCCCCCHHHHHHHhCcc-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhh
Confidence            53 2357899999888764     345444  334699999987653   3 58899999999974310  111112222


Q ss_pred             CCC-cEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 HRP-DLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 l~~-Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ... -+++.|+.| .|| ..|  +|+++..++..
T Consensus       222 ~~~~vi~~~S~SK-~~g-~~GlRiG~~~~~~~~~  253 (387)
T PRK08960        222 VDDDAFVLNSFSK-YFG-MTGWRLGWLVAPPAAV  253 (387)
T ss_pred             ccCCEEEEeeccc-ccC-CcccEEEEEEcCHHHH
Confidence            222 368899999 998 558  99999876543

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.26  E-value=6.6e-11  Score=115.10  Aligned_cols=163  Identities=15%  Similarity=0.106  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++    |  ++++  +|++|+|+|+|+++++.++ ..+|+.|+. ...+. . +...++..|.++..+|.+
T Consensus        73 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~p~y~-~-~~~~~~~~g~~~~~v~~~  147 (391)
T PRK08361         73 PELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPDPAFV-C-YVEDAKIAEAKPIRIPLR  147 (391)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-cHHHHHHcCCEEEEEecC
Confidence            36788888876    3  5555  4999999999999999887 468898863 33333 1 223345569999999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      .. +..++.+++++.++++     ++++.++  ++-||.++|   +++|.+ |+++++++++|.+..-.   +.....+.
T Consensus       148 ~~~~~~~d~~~l~~~i~~~-----~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~  222 (391)
T PRK08361        148 EENEFQPDPDELLELITKR-----TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMI  222 (391)
T ss_pred             CccCCCCCHHHHHHhcccc-----cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHh
Confidence            43 2358999999888764     4566554  336999999   566644 68899999999885420   11111221


Q ss_pred             C--CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 L--HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~--l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .  ...++++.|++| .|| ..|  +|+++..+++.
T Consensus       223 ~~~~~~~i~~~s~SK-~~~-~~GlRiG~~~~~~~~~  256 (391)
T PRK08361        223 KYAPDNTILANSFSK-TFA-MTGWRLGFVIAPEQVI  256 (391)
T ss_pred             hcCCCCEEEEecCch-hcC-CcHhhhhhhccCHHHH
Confidence            1  246789999999 998 448  89999876554

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.24  E-value=2e-10  Score=110.52  Aligned_cols=159  Identities=12%  Similarity=0.034  Sum_probs=106.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc-c
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL-R  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g-~  206 (311)
                      ..+.|+.||+++++++++  |++|+|+++++++++..+  .+|+.++..-.. . .....++..|.++..+|.+..++ .
T Consensus        57 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~l--~~g~viv~~P~y-~-~~~~~~~~~g~~~~~v~~~~~~~~~  130 (356)
T PRK08056         57 YRHLHQALARHHQVPASW--ILAGNGETESIFAVVSGL--KPRRAMIVTPGF-A-EYRRALQQVGCEIRRYSLREADGWQ  130 (356)
T ss_pred             HHHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHh--CCCCEEEeCCCc-H-HHHHHHHHcCCeEEEEecccccCCC
Confidence            468999999999998765  999999999999998876  467655432221 1 13344566799999999764223 3


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEeccccc--Cc-cCcccC-CCCCCCc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGL--VF-GEDQLA-LALHRPD  276 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQs--v~-G~~pld-l~~l~~D  276 (311)
                      ++ +++.+.+.++     +++|.++  ++-||..+|   +++|.+ |+++++++++|.+-.  .. +...++ +...+.+
T Consensus       131 ~~-~~~~~~~~~~-----~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  204 (356)
T PRK08056        131 LT-DAILEALTPD-----LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHL  204 (356)
T ss_pred             cc-HHHHHhccCC-----CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCE
Confidence            33 3444555433     4565554  335999999   555644 688999999999821  10 111111 3345578


Q ss_pred             EEEEccccCcCCCC-CceEEEEEe
Q 021539          277 LVLCTLDNNTHAQP-LKITCLLVR  299 (311)
Q Consensus       277 fl~~S~HK~l~G~P-~GiG~L~vr  299 (311)
                      +++.|++| +||.| ..+|+++..
T Consensus       205 i~~~S~SK-~~~~~G~RiG~~v~~  227 (356)
T PRK08056        205 WVLRSLTK-FYAIPGLRLGYLVNS  227 (356)
T ss_pred             EEEEechh-hccCcchhheeeecC
Confidence            99999999 88833 138888774

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.24  E-value=1.6e-10  Score=111.22  Aligned_cols=161  Identities=16%  Similarity=0.093  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.++.+++++|++ +  .|++|+| ++++..++.++ +++||.|+. ...|.+. . ..++..|.++..++.    
T Consensus        87 ~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~~~~~~~~-~-~~~~~~~~~~~~~~~----  155 (397)
T PRK06939         87 DLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISDALNHASI-I-DGVRLCKAKRYRYAN----  155 (397)
T ss_pred             HHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEEhhhhHHH-H-HHHHhcCCceEEeCC----
Confidence            44568899999999974 3  4888888 77877777776 578999864 3444422 1 223334666665543    


Q ss_pred             cccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCC
Q 021539          205 LRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALA  271 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~  271 (311)
                        .+.+++++.+++... ..++++|++.++  .+|.+.|+++|.+ |+++|+++++|.+|+. |....         ++.
T Consensus       156 --~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~-g~~~~~~~~~~~~~~~~  232 (397)
T PRK06939        156 --NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAV-GFVGENGRGTVEHFGVM  232 (397)
T ss_pred             --CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCCHHHHcCCC
Confidence              356777777764111 112567776654  4899999999966 7999999999999976 64321         221


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                       .++|++++|++| +++++. .|+++.+++..
T Consensus       233 -~~~~i~~~S~sK-~~~g~r-~G~v~~~~~~~  261 (397)
T PRK06939        233 -DRVDIITGTLGK-ALGGAS-GGYTAGRKEVI  261 (397)
T ss_pred             -CCCcEEEEECHH-HhCccC-ceEEEeCHHHH
Confidence             257999999999 664364 58888876543

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.24  E-value=2.5e-10  Score=109.60  Aligned_cols=162  Identities=12%  Similarity=0.092  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++.|+.+|+++++++++  |++|+|+++++++++..+ +.+||.|+.. ..+.  .....++..|.++..++.+. ++.+
T Consensus        62 ~~lr~~ia~~~~~~~~~--i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~  135 (351)
T PRK14807         62 EKLREELARYCSVVPTN--IFVGNGSDEIIHLIMLAF-INKGDVVIYPHPSFA--MYSVYSKIAGAVEIPVKLKE-DYTY  135 (351)
T ss_pred             HHHHHHHHHHhCCCccc--EEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChH--HHHHHHHHcCCeEEEeecCC-CCCC
Confidence            58999999999998765  999999999999999887 5789988632 2211  23344566799999999874 5678


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccC-CCCCCCcEEEEcc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLA-LALHRPDLVLCTL  282 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pld-l~~l~~Dfl~~S~  282 (311)
                      +.+++++.+++.    +++++.++  ++-||..+|.+++.+ +++++..+++|.+..-. +....+ +....--+++.|+
T Consensus       136 d~~~l~~~~~~~----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~  211 (351)
T PRK14807        136 DVGSFIKVIEKY----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTL  211 (351)
T ss_pred             CHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecc
Confidence            999999888642    14555544  225999999999976 57767789999997420 322222 1222335888999


Q ss_pred             ccCcCCCCCc--eEEEEEeCCC
Q 021539          283 DNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       283 HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .| .|| ..|  +|.++..+++
T Consensus       212 SK-~~~-~~GlRiG~~v~~~~~  231 (351)
T PRK14807        212 SK-AFG-LAGLRVGYAVANENI  231 (351)
T ss_pred             hH-hcc-cchhceeeeecCHHH
Confidence            99 888 346  7888776544

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.23  E-value=1.8e-10  Score=110.74  Aligned_cols=161  Identities=10%  Similarity=0.036  Sum_probs=110.6

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+|+++    |  ++++  +|++|+|+++|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+.
T Consensus        65 ~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~v~~~~  139 (382)
T PRK06108         65 ELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVTPLWP-N-LVAAPKILGARVVCVPLDF  139 (382)
T ss_pred             HHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCcc-c-hHHHHHHCCCEEEEeeCCC
Confidence            5667777654    6  5554  5999999999999998877 468898763 33333 1 2233456699999999864


Q ss_pred             C--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccCcc-------
Q 021539          203 L--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQ-------  267 (311)
Q Consensus       203 ~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~p-------  267 (311)
                      .  +..++.++|++.++++     ++++.++  ++-||.++|.++   |.+ |+++|+++++|.+++. ....       
T Consensus       140 ~~~~~~~d~~~l~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~-~~~~~~~~~~~  213 (382)
T PRK06108        140 GGGGWTLDLDRLLAAITPR-----TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYER-LYYAPGGRAPS  213 (382)
T ss_pred             CCCCccCCHHHHHHhcCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhh-hccCCCCCCCC
Confidence            2  2357899998888654     4555554  235999887654   443 5889999999998764 2211       


Q ss_pred             -cCCCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          268 -LALAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       268 -ldl~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       +++.. .+..+++.|++| .|| ..|  +|++++++++.
T Consensus       214 ~~~~~~~~~~~i~~~S~SK-~~g-~~G~RiG~~~~~~~~~  251 (382)
T PRK06108        214 FLDIAEPDDRIIFVNSFSK-NWA-MTGWRLGWLVAPPALG  251 (382)
T ss_pred             HhhcCCCcCCEEEEeechh-hcc-CcccceeeeeCCHHHH
Confidence             22322 234588999999 887 336  79999976554

>PLN02242 methionine gamma-lyase

Probab=99.23  E-value=1.6e-10  Score=114.81  Aligned_cols=164  Identities=9%  Similarity=-0.024  Sum_probs=115.2

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHH-HHHHhCCcEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIK-GFAAQKESKV  195 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~-~la~~~G~~V  195 (311)
                      .++......++.++.+|+++|+.  .  +++|+|+++|+.+++.++ +++||+|+.... +..  ..+. .+.+..|+++
T Consensus        70 Y~r~~~Pt~~~LE~~lA~l~g~~--~--~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~  144 (418)
T PLN02242         70 YSRHFNPTVLNLGRQMAALEGTE--A--AYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGGTHALLAHFLPRKCNITT  144 (418)
T ss_pred             ccCCCChhHHHHHHHHHHHhCCC--e--EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence            35555556778999999999984  2  678999999999998887 578999874332 111  1121 1223358777


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ..++..      +.++++++++++    ++++|.+...  -+|.+.|+++|.+ ||++|+++++|.+++. ..  ++...
T Consensus       145 ~~~d~~------d~e~l~~~i~~~----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~--~~~~~  211 (418)
T PLN02242        145 TFVDIT------DLEAVKKAVVPG----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MV--LSPAR  211 (418)
T ss_pred             EEcCCC------CHHHHHHhcCcC----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cC--CCHHH
Confidence            666542      678888888752    1466666433  5999999999976 6999999999999976 43  34445


Q ss_pred             CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +++|+++.|++| .+|++..  .|+++.++++
T Consensus       212 ~g~divv~S~SK-~l~g~g~~~gG~iv~~~~l  242 (418)
T PLN02242        212 LGADVVVHSISK-FISGGADIIAGAVCGPAEL  242 (418)
T ss_pred             cCCcEEEEeCcc-ccCCCCCceEEEEEcCHHH
Confidence            689999999999 6663532  4666655443

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.23  E-value=3e-10  Score=108.76  Aligned_cols=157  Identities=16%  Similarity=0.120  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.++++++.+  +  .++++++++++..++..+ +++||.|+. ...|.. ... .++..|.++..+|..   
T Consensus        84 ~~~~~l~~~la~~~~~~--~--~i~~~~g~~~~~~~l~~~-~~~gd~V~~~~~~~~~-~~~-~~~~~g~~~~~~~~~---  153 (385)
T PRK05958         84 PAHEALEEELAEWFGAE--R--ALLFSSGYAANLAVLTAL-AGKGDLIVSDKLNHAS-LID-GARLSRARVRRYPHN---  153 (385)
T ss_pred             HHHHHHHHHHHHHhCCC--c--EEEECcHHHHHHHHHHHh-CCCCCEEEEeCccCHH-HHH-HHHhcCCceEEeCCC---
Confidence            44678999999999952  2  444555666665555555 578999864 344432 222 233458887777642   


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALAL  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~  272 (311)
                         +.+++++.++...  ..+.++.+...  .+|.+.|+++|.+ |+++|+++++|.+|+. |...         .++..
T Consensus       154 ---d~~~l~~~i~~~~--~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~-g~~~~~g~~~~~~~~~~~  227 (385)
T PRK05958        154 ---DVDALEALLAKWR--AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT-GVLGPQGRGLAAEAGLAG  227 (385)
T ss_pred             ---CHHHHHHHHHhcc--CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cccCCCCCchHHhhCCCC
Confidence               5678888886521  12466666544  5899999999966 7999999999999987 6432         12333


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      ...++++.|+|| +|| +.| |+++.+++
T Consensus       228 ~~~~i~~~s~sK-~~~-~~G-g~~~~~~~  253 (385)
T PRK05958        228 EPDVILVGTLGK-ALG-SSG-AAVLGSET  253 (385)
T ss_pred             CCceEEEEechh-hcc-cCC-cEEEcCHH
Confidence            334588999999 888 667 77766543

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.23  E-value=2e-10  Score=110.64  Aligned_cols=159  Identities=15%  Similarity=0.081  Sum_probs=108.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.++.+++++|.+ +  .|++|+| ++++..++.++ +.+||.|+... .|.. .+.. +...|+++..++    
T Consensus        77 ~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~~~~~~-~~~~-~~~~g~~~~~~~----  145 (385)
T TIGR01825        77 LRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQGVLSAL-LRKGDIVLSDELNHAS-IIDG-LRLTKATKKIYK----  145 (385)
T ss_pred             cHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHh-CCCCCEEEEEccccHH-HHHH-HHhcCCceEEeC----
Confidence            345678999999999963 2  4888877 56666666665 57899886433 3432 2221 223466665543    


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALA  271 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~  271 (311)
                        .++.+++++.+++... .++++|++..+  .+|.+.|+++|.+ |+++|+++++|.+|+. |..+         +++.
T Consensus       146 --~~d~~~l~~~l~~~~~-~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~  221 (385)
T TIGR01825       146 --HADMDDLDRVLRENPS-YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGS-GVMGEAGRGTVHHFGLE  221 (385)
T ss_pred             --CCCHHHHHHHHHhhcc-CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCccHhhcCCC
Confidence              2567778877764311 13678877654  5899999999966 6999999999999987 6432         3444


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                       .+.||++.|++| .+| ..| |+++.+++.
T Consensus       222 -~~~~i~~~s~sK-~~~-~~g-G~~~~~~~~  248 (385)
T TIGR01825       222 -DKVDIQVGTLSK-AIG-VVG-GYAAGHKEL  248 (385)
T ss_pred             -cCCcEEEEeccH-Hhh-cCC-CEEecCHHH
Confidence             578999999999 778 445 777766544

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.23  E-value=3.3e-10  Score=110.57  Aligned_cols=163  Identities=11%  Similarity=0.102  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.+|++++      +++++  |++|+|+|+++++++.++ ..+|+.|+. ...+. . +...++..|++++.+|.
T Consensus        75 ~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p~~~-~-~~~~~~~~g~~v~~v~~  149 (394)
T PRK06836         75 YPEVREAIAESLNRRFGTPLTADH--IVMTCGAAGALNVALKAI-LNPGDEVIVFAPYFV-E-YRFYVDNHGGKLVVVPT  149 (394)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCcCc--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-HHHHHHHcCCEEEEEec
Confidence            4478889999885      45554  999999999999999887 478898763 22222 1 33345567999999998


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH----HHH------CCcEEEecccccCc---cC
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE----AHR------NAWHVLLDATGLVF---GE  265 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~----a~~------~g~~vlvDAaQsv~---G~  265 (311)
                      +..++.++.++++++++++     +++|.+++.  -||+++|.+++.+    |++      +++++++|.+..-.   |.
T Consensus       150 ~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~  224 (394)
T PRK06836        150 DTDTFQPDLDALEAAITPK-----TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA  224 (394)
T ss_pred             CCccCcCCHHHHHhhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC
Confidence            7533578999999998764     466666533  5999999876632    466      79999999986521   11


Q ss_pred             cccC-CCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          266 DQLA-LALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       266 ~pld-l~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .... ++..+-.+++.|+.| .||.| |  +|++++.+..
T Consensus       225 ~~~~~~~~~~~~i~~~S~SK-~~~~p-GlRiG~~~~~~~~  262 (394)
T PRK06836        225 EVPYIFKYYDNSIVVYSFSK-SLSLP-GERIGYIAVNPEM  262 (394)
T ss_pred             CCCChHHccCcEEEEecchh-hccCc-ceeeEEEecCHHH
Confidence            1111 222334688899999 88845 5  8999987654

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.22  E-value=3.7e-10  Score=108.26  Aligned_cols=163  Identities=11%  Similarity=-0.038  Sum_probs=108.4

Q ss_pred             HHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCC---CEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          130 QARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKG---NYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~G---d~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.|+.|++++    |.+-+.. +|++|+|+++|++.+...+. .+|   |.|+.. ..+. . ....++..|++++.+|.
T Consensus        40 ~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~-~-~~~~~~~~g~~~~~v~~  116 (350)
T TIGR03537        40 ALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYP-V-YERGALFAGGEPTAVKL  116 (350)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCc-c-hHHHHHhcCCEEEEccc
Confidence            5777777775    6432222 59999999999999988773 445   577633 2322 1 22334557999999988


Q ss_pred             CCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccC--ccCcccCCC
Q 021539          201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLV--FGEDQLALA  271 (311)
Q Consensus       201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv--~G~~pldl~  271 (311)
                      +.. +..++.++++++++++     ++++.++  ++-||..+|   +++|.+ |+++|+++++|.++.-  .+..+.++.
T Consensus       117 ~~~~~~~~d~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~  191 (350)
T TIGR03537       117 KKEDGFLLRLEKVEKSILEE-----TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL  191 (350)
T ss_pred             CcccCCccCHHHHHHhhhhc-----cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh
Confidence            632 3347999999888764     4565554  336999999   555644 6899999999999852  043333333


Q ss_pred             CCCC--cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          272 LHRP--DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~--Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ..+.  .+++.|+.| .+|.| |  +|+++..+++
T Consensus       192 ~~~~~~~i~~~s~SK-~~g~~-GlRiG~~~~~~~~  224 (350)
T TIGR03537       192 EVGIENVLAFHSLSK-RSGMT-GYRSGFVAGDEKL  224 (350)
T ss_pred             hcCcCCEEEEeeccc-ccCCc-cccceeeecCHHH
Confidence            2233  377779999 88844 7  8888765543

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PLN02483 serine palmitoyltransferase

Probab=99.21  E-value=2.7e-10  Score=115.22  Aligned_cols=162  Identities=14%  Similarity=0.139  Sum_probs=109.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.|+.+|+++|.+ +  .|+|++|....+ .++.++ +.+||.|++. ..|.+  +...++..|++++.++.+  
T Consensus       145 ~~~~~ele~~lA~~~g~~-~--ai~~~~G~~an~-~~i~al-~~~Gd~Vi~d~~~h~s--~~~~~~~~Ga~v~~~~~~--  215 (489)
T PLN02483        145 TKLHRELEELVARFVGKP-A--AIVFGMGYATNS-TIIPAL-IGKGGLIISDSLNHNS--IVNGARGSGATIRVFQHN--  215 (489)
T ss_pred             cHHHHHHHHHHHHHhCCC-c--EEEECCHHHHHH-HHHHHh-CCCCCEEEEcchhhHH--HHHHHHHcCCeEEEEeCC--
Confidence            456689999999999963 3  488888754433 445555 5789998754 34443  223456679999998864  


Q ss_pred             CcccCHHHHHhhhhc-------cCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----
Q 021539          204 DLRIKGSQLSQNFRR-------KCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-----  267 (311)
Q Consensus       204 ~g~id~~~L~~~l~~-------~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-----  267 (311)
                          +.++|++.+++       ++... .+.+|.+..+  .+|.+.++++|.+ |+++|+++++|.+|++ |...     
T Consensus       216 ----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~-g~~G~~G~g  290 (489)
T PLN02483        216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSI-GAVGKTGRG  290 (489)
T ss_pred             ----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCcc-CccCCCCCc
Confidence                23455555442       11000 1235555555  4899999999966 6999999999999987 6421     


Q ss_pred             ----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          268 ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       268 ----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                          +++...++|+++.|++| .|| +.| |+++.+++++
T Consensus       291 ~~~~~~v~~~~~dI~~~SfSK-s~g-~~G-G~i~~~~~li  327 (489)
T PLN02483        291 VCELLGVDPADVDIMMGTFTK-SFG-SCG-GYIAGSKELI  327 (489)
T ss_pred             hHHhcCCCcccCcEEEEecch-hcc-cCc-eEEEcCHHHH
Confidence                23333468999999999 888 667 8887766544

>PRK09105 putative aminotransferase; Provisional

Probab=99.21  E-value=2.2e-10  Score=111.33  Aligned_cols=163  Identities=17%  Similarity=0.066  Sum_probs=114.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..+.|+.||+++|+++++  |++|+|+++++++++..+ ..+||.|+.. ..+. . ....++..|.+++.+|.+. +..
T Consensus        80 ~~~Lr~aia~~~~v~~e~--I~it~Gs~~ai~~~~~~l-~~~gd~Vli~~P~y~-~-~~~~~~~~g~~~~~v~~~~-~~~  153 (370)
T PRK09105         80 EDDLRTLFAAQEGLPADH--VMAYAGSSEPLNYAVLAF-TSPTAGLVTADPTYE-A-GWRAADAQGAPVAKVPLRA-DGA  153 (370)
T ss_pred             HHHHHHHHHHHhCcChhh--EEEcCChHHHHHHHHHHH-cCCCCEEEEeCCChH-H-HHHHHHHcCCeEEEecCCC-CCC
Confidence            558999999999998765  999999999999999887 4678887633 3322 2 2334566799999999864 566


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH---HHCCcEEEecccccCccCcc--cCCCCCCCcEEE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA---HRNAWHVLLDATGLVFGEDQ--LALALHRPDLVL  279 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a---~~~g~~vlvDAaQsv~G~~p--ldl~~l~~Dfl~  279 (311)
                      ++.+++++. .++     ++++.++  ++-||.++|.+++.++   +++++++++|.+..-.+..+  +++.....++++
T Consensus       154 ~d~~~l~~~-~~~-----~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~  227 (370)
T PRK09105        154 HDVKAMLAA-DPN-----AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIV  227 (370)
T ss_pred             CCHHHHHhc-CCC-----CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEE
Confidence            888888765 222     3455443  3369999999998653   23589999999874212222  333333566666


Q ss_pred             E-ccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          280 C-TLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       280 ~-S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      + |+-| .|| ..|  +|+++..+++++
T Consensus       228 ~~SfSK-~~g-~~GlRiG~~v~~~~~i~  253 (370)
T PRK09105        228 LRTFSK-LYG-MAGMRLGLAAARPDLLA  253 (370)
T ss_pred             EecccH-hhc-CCccceeeeecCHHHHH
Confidence            5 6668 998 568  999998765543

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.20  E-value=5.5e-10  Score=110.50  Aligned_cols=160  Identities=11%  Similarity=-0.003  Sum_probs=111.4

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH--HHHHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD--YIKGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~--~~~~la~~~G~~V~~v  198 (311)
                      +......+..++.++.+-+..  .  .++++++++|++.++.++ +++||+|+.. ..+...  .+..++++.|++|.++
T Consensus        60 R~gnPt~~~Le~~la~le~~~--~--~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v  134 (395)
T PRK05967         60 TRGTPTTDALCKAIDALEGSA--G--TILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY  134 (395)
T ss_pred             CCCChHHHHHHHHHHHHhCCC--C--EEEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence            444444567788888777653  2  455666899999998887 6899998743 333322  2335567789999988


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +.+      +.+.++++++++     +++|.+...  .+|.+.||++|.+ ||++|++++||.+++. + ...+.-++++
T Consensus       135 d~~------~~e~l~~al~~~-----TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~-p-~~~~pl~~Ga  201 (395)
T PRK05967        135 DPE------IGAGIAKLMRPN-----TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWAT-P-LYFRPLDFGV  201 (395)
T ss_pred             CCC------CHHHHHHhcCcC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccC-c-eecChhHcCC
Confidence            643      236788888765     578877643  5899999999976 7999999999999987 5 2223334689


Q ss_pred             cEEEEccccCcCCCC-Cc-eEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQP-LK-ITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P-~G-iG~L~vr~  300 (311)
                      |+++-|..| ++++- -- .|++..++
T Consensus       202 Divv~S~tK-y~~Gh~d~~~G~v~~~~  227 (395)
T PRK05967        202 DISIHAATK-YPSGHSDILLGTVSANE  227 (395)
T ss_pred             CEEEEeccc-ccCCCCCeeEEEEEcCH
Confidence            999999999 44411 11 56554443

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.18  E-value=4e-10  Score=109.15  Aligned_cols=162  Identities=13%  Similarity=0.059  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++      +++++  +|++|+|+|+|+.+++.++ ..+|+.|+. ...|.  .....++..|+++..+|.+
T Consensus        71 ~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~y~--~~~~~~~~~g~~~~~~~~~  145 (393)
T PRK05764         71 PELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIPAPYWV--SYPEMVKLAGGVPVFVPTG  145 (393)
T ss_pred             HHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEecCCCCc--chHHHHHHcCCEEEEEecC
Confidence            47888888887      35544  4999999999999998887 568888763 33333  1333455669999999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCc-----
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GED-----  266 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~-----  266 (311)
                      .. +..++.+.+++.++++     +++|.++.  +-||.++|.+   +|.+ |+++|+++++|.+..-.   +..     
T Consensus       146 ~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~  220 (393)
T PRK05764        146 EENGFKLTVEQLEAAITPK-----TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIA  220 (393)
T ss_pred             cccCCcCCHHHHHHhhCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHH
Confidence            42 3467889999888654     45655543  2599998854   5544 68999999999876531   111     


Q ss_pred             ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          267 QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       267 pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .++....+.++++.|+-| .+| +.|  +|+++.+++.
T Consensus       221 ~~~~~~~~~~i~~~s~SK-~~~-~~G~RiG~i~~~~~~  256 (393)
T PRK05764        221 SLSPELRDRTITVNGFSK-AYA-MTGWRLGYAAGPKEL  256 (393)
T ss_pred             HcCCCCcCCEEEEecCcc-ccc-CccceeEEEecCHHH
Confidence            111122346789999999 888 447  7988876654

>PRK08912 hypothetical protein; Provisional

Probab=99.18  E-value=5.7e-10  Score=108.27  Aligned_cols=163  Identities=10%  Similarity=0.036  Sum_probs=112.2

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+++++    |  ++++ .+|++|+|+|+|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+.
T Consensus        67 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~~~~~~  142 (387)
T PRK08912         67 ELRQAVAAHYARFQGLDLDPE-TEVMVTSGATEALAAALLAL-VEPGDEVVLFQPLYD-A-YLPLIRRAGGVPRLVRLEP  142 (387)
T ss_pred             HHHHHHHHHHHHHhCCCCCCc-ccEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEEecCc
Confidence            5677777665    4  4444 15999999999999888877 467898863 33322 2 3344566799999999864


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc--cC---ccc-CC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF--GE---DQL-AL  270 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~--G~---~pl-dl  270 (311)
                      .+..++.+.|++.+.++     ++++.++  ++-||.++|.++   |.+ |+++++++++|.+..-.  +.   .++ .+
T Consensus       143 ~~~~~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~  217 (387)
T PRK08912        143 PHWRLPRAALAAAFSPR-----TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTL  217 (387)
T ss_pred             ccCcCCHHHHHHHhCcc-----ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhC
Confidence            35678999999888754     3455544  236999999655   433 68899999999987420  11   111 12


Q ss_pred             CC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          271 AL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       271 ~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .. .+.++++.|+.| .|| ..|  +|+++..+++.
T Consensus       218 ~~~~~~~i~~~S~SK-~~g-~~GlRiG~~~~~~~~~  251 (387)
T PRK08912        218 PGMRERTVKIGSAGK-IFS-LTGWKVGFVCAAPPLL  251 (387)
T ss_pred             CCccCceEEEeechh-hcc-CcCceeEEEecCHHHH
Confidence            11 245799999999 998 558  89999876543

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.17  E-value=8.6e-10  Score=108.67  Aligned_cols=150  Identities=15%  Similarity=0.021  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH---HHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD---YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~---~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..++.-+++|++.|+.  .  .+.++++|.|+++++.++ +++||+|++...+...   .+.....+.|+++.+++++..
T Consensus        65 ~~~~lE~~la~leg~~--~--av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~  139 (384)
T PRK06434         65 TVQAFEEKYAVLENAE--H--ALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL  139 (384)
T ss_pred             hHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence            3445566699999984  2  566777779999999887 6899998865544322   223445667999999987631


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                       ..++       ++++    ++++|.+.+.  .++.+.|+++|.+ ||+++  ++||++|+. +...-.+ .+++|++++
T Consensus       140 -~~~~-------l~~~----~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s-~~~~~pl-~~gaDivv~  203 (384)
T PRK06434        140 -NSLD-------FDPS----NYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS-PYNQNPL-DLGADVVIH  203 (384)
T ss_pred             -hhee-------ecCC----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC-cccCCch-hcCCCEEEe
Confidence             1221       2221    2577766544  4889999999976 68888  567999987 6552233 368999999


Q ss_pred             ccccCcCCCCCc-eEEEEE
Q 021539          281 TLDNNTHAQPLK-ITCLLV  298 (311)
Q Consensus       281 S~HK~l~G~P~G-iG~L~v  298 (311)
                      |+|| ++++|.+ +|.+++
T Consensus       204 S~tK-~i~G~~d~~gG~vv  221 (384)
T PRK06434        204 SATK-YISGHSDVVMGVAG  221 (384)
T ss_pred             eccc-ccCCCCCceEEEEe
Confidence            9999 5554764 344443

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.16  E-value=2.4e-10  Score=113.14  Aligned_cols=169  Identities=14%  Similarity=0.041  Sum_probs=106.6

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhcCCCCCCCEEEEcc----CcChHH-HHHH----HH
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFV-PNYKEAMLMIGESYPFFKGNYYLTII----SEESDY-IKGF----AA  189 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFT-snaTealnlv~~s~~~~~Gd~Ils~~----eh~~~~-~~~l----a~  189 (311)
                      |......+ +-+++++.++||++++++.+-+= -+++.|+..+..++ .++||.|++..    +|-+.. ....    +.
T Consensus        60 G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL-l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~  138 (399)
T PF00464_consen   60 GCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL-LKPGDTIMGLSLPHGGHLSHGSSVNFKKISAS  138 (399)
T ss_dssp             STHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH-T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHH
T ss_pred             CcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH-HhhcCcEEecChhhcccccccccccccccccc
Confidence            44444444 46999999999998766544444 48888988888888 48999997322    232111 1000    01


Q ss_pred             hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc--
Q 021539          190 QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--  266 (311)
Q Consensus       190 ~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--  266 (311)
                      .+.+++...+++.+++.||.+++++.+++.    +.+||.+.....-...|++++++ |++.|+++++|++|.+ |.+  
T Consensus       139 ~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~----kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~-GLIa~  213 (399)
T PF00464_consen  139 GLYFESVPYPVDPDTGLIDYDELEKLAKEH----KPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIA-GLIAG  213 (399)
T ss_dssp             HHHSEEEEEEB-TTTSSB-HHHHHHHHHHH------SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTH-HHHHT
T ss_pred             cceEEEEeeeeecCCCeECHHHHHHHHhhc----CCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccc-cceeh
Confidence            124677777888668899999999888764    25688877655667789999977 5899999999999986 543  


Q ss_pred             ---ccCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          267 ---QLALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       267 ---pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                         |=.+.  .+|++++|.||++.| |+| |+++.+
T Consensus       214 g~~~~P~~--~ADvvt~sThKtl~G-Prg-giI~~~  245 (399)
T PF00464_consen  214 GLFPNPFP--YADVVTGSTHKTLRG-PRG-GIILTN  245 (399)
T ss_dssp             TSS--GCC--TSSEEEEESSGGG-S-SS--EEEEES
T ss_pred             heecCccc--cceEEEeeccccccc-cCc-eEEEEc
Confidence               33443  389999999997777 986 777766

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK03321 putative aminotransferase; Provisional

Probab=99.16  E-value=2.2e-10  Score=109.55  Aligned_cols=164  Identities=12%  Similarity=0.066  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .++.|+.+|+++|+++++  |++|+|++++++.++..+ +.+||.|+...--... ....++..|.++..+|.+. ++.+
T Consensus        59 ~~~lr~~ia~~~~~~~~~--I~~~~G~~~~l~~~~~~~-~~~gd~Vli~~p~y~~-~~~~~~~~g~~~~~v~~~~-~~~~  133 (352)
T PRK03321         59 AVELRAALAEHLGVPPEH--VAVGCGSVALCQQLVQAT-AGPGDEVIFAWRSFEA-YPILVQVAGATPVQVPLTP-DHTH  133 (352)
T ss_pred             HHHHHHHHHHHhCcCHHH--EEECCCHHHHHHHHHHHh-cCCCCEEEeCCCCHHH-HHHHHHHcCCEEEEccCCC-CCCC
Confidence            568999999999997655  999999999999988876 5789998743211111 1223455699999999864 4568


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH--CCcEEEecccccCc--c-Ccc--cCCCCCCCc-
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVF--G-EDQ--LALALHRPD-  276 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~--G-~~p--ldl~~l~~D-  276 (311)
                      +.+++++.++++     +++|.++..  -||.++|.+++.+ ++.  +++++++|.+..-.  + ..+  +..-....+ 
T Consensus       134 ~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v  208 (352)
T PRK03321        134 DLDAMAAAITDR-----TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNV  208 (352)
T ss_pred             CHHHHHHhhccC-----CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCE
Confidence            899998888654     456665432  5999999999866 454  59999999987520  1 111  111111234 


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +++.|+=| .|| ..|  +|+++.++++.
T Consensus       209 i~~~S~SK-~~g-~~GlRiG~~v~~~~~~  235 (352)
T PRK03321        209 VVLRTFSK-AYG-LAGLRVGYAVGHPEVI  235 (352)
T ss_pred             EEEecchH-Hhh-hHHHhhhhhcCCHHHH
Confidence            44558889 888 447  89998876543

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.15  E-value=1.2e-09  Score=106.63  Aligned_cols=157  Identities=9%  Similarity=-0.010  Sum_probs=105.0

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChH-HH-HHHHHhCCcEEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESD-YI-KGFAAQKESKVIAA  198 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~-~~-~~la~~~G~~V~~v  198 (311)
                      +......++.++++|++.|+.  .  ++.++|+++|+.++...  +++||+|+.. ..+... .+ .....+.++++.+ 
T Consensus        50 R~~~p~~~~le~~lA~leg~~--~--~v~~~sG~aAi~~~l~~--l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~-  122 (364)
T PRK07269         50 RTKNPTRAKLEETLAAIESAD--Y--ALATSSGMSAIVLAFSV--FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY-  122 (364)
T ss_pred             CCCCccHHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHH--hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe-
Confidence            333334457888999999863  3  89999999999988753  4789998643 233321 11 2212222333322 


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                             ..|.++++++++++     +++|.+..  +-+|.+.|+++|.+ ||++|+++++|.|++. +...-.+ .+++
T Consensus       123 -------~~d~~~l~~~i~~~-----TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~-~~~~~pl-~~ga  188 (364)
T PRK07269        123 -------ANTEEELIAAIEED-----TDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS-PIYQRPI-ELGA  188 (364)
T ss_pred             -------cCCHHHHHHhcCcC-----ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCC
Confidence                   13678898998765     46665432  35899999999966 6999999999999776 5433333 4689


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      |++++|++| ++|++..  .|+++.++
T Consensus       189 Divv~S~tK-~l~g~~d~~gG~v~~~~  214 (364)
T PRK07269        189 DIVLHSATK-YLSGHNDVLAGVVVTND  214 (364)
T ss_pred             cEEEecCce-eccCCCcccceEEEeCc
Confidence            999999999 6664654  35445443

>PRK07324 transaminase; Validated

Probab=99.15  E-value=8.6e-10  Score=107.12  Aligned_cols=162  Identities=12%  Similarity=0.062  Sum_probs=112.2

Q ss_pred             HHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCC-ccc
Q 021539          130 QARNRALKHCG-LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLD-LRI  207 (311)
Q Consensus       130 ~aR~~IA~~Lg-a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~-g~i  207 (311)
                      +.|+.||++++ +++++  |++|+|+++|+.+++.++ ..+||+|+...--... ....++..|++++.+|.+..+ ..+
T Consensus        66 ~lr~~ia~~~~~~~~~~--vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~-~~~~~~~~g~~v~~v~~~~~~~~~~  141 (373)
T PRK07324         66 EFKEAVASLYQNVKPEN--ILQTNGATGANFLVLYAL-VEPGDHVISVYPTYQQ-LYDIPESLGAEVDYWQLKEENGWLP  141 (373)
T ss_pred             HHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh-HHHHHHHcCCEEEEEecccccCCCC
Confidence            78999999885 56554  999999999999999888 5789998643211111 234456679999999986533 346


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc--ccCCCC-CCCcEE
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED--QLALAL-HRPDLV  278 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~--pldl~~-l~~Dfl  278 (311)
                      +.++|++.++++     ++++.++..  -||.++|   +++|.+ |+++|+++++|.+..-....  ..++.. .+-.++
T Consensus       142 d~~~l~~~~~~~-----~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~  216 (373)
T PRK07324        142 DLDELRRLVRPN-----TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGIS  216 (373)
T ss_pred             CHHHHHHhCCCC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEE
Confidence            889998888764     467766533  5999999   666654 68999999999986421111  111111 122466


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +.|+-| .||.| |  +|.++..+++
T Consensus       217 ~~s~SK-~~~~~-G~RiG~i~~~~~l  240 (373)
T PRK07324        217 TNSMSK-TYSLP-GIRVGWIAANEEV  240 (373)
T ss_pred             Eecchh-hcCCc-cceeEEEecCHHH
Confidence            779999 88844 6  6998876544

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.14  E-value=3.2e-10  Score=108.16  Aligned_cols=152  Identities=14%  Similarity=0.100  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+.|+.+++++|+++++  |++|+|+++++..++..+  .+|+.++....++ . ....++..|+++..+|        |
T Consensus        50 ~~lr~~la~~~~~~~~~--i~~t~G~~~~i~~~~~~l--~~g~vl~~~p~y~-~-~~~~~~~~g~~~~~~~--------d  115 (330)
T TIGR01140        50 DELRAAAAAYYGLPAAS--VLPVNGAQEAIYLLPRLL--APGRVLVLAPTYS-E-YARAWRAAGHEVVELP--------D  115 (330)
T ss_pred             HHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCCeEEEeCCCcH-H-HHHHHHHcCCEEEEeC--------C
Confidence            47999999999987665  999999999999987765  4664334433332 2 3344566799888776        5


Q ss_pred             HHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCCC----CCCCcEE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLALA----LHRPDLV  278 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~~Dfl  278 (311)
                      .++|++.+++      ++++.+  +++-||.++|.+++   .+ |+++|+++++|.++.- .....++.    ..+-+++
T Consensus       116 ~~~l~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~i~  188 (330)
T TIGR01140       116 LDRLPAALEE------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFID-FTPDASLAPQAARFPGLVV  188 (330)
T ss_pred             HHHHHhhccc------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccc-cCCccchhhHhccCCCEEE
Confidence            6778777743      234433  33469999996655   33 5789999999999863 21111221    1245699


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.|++| .|| +.|  +|+++++++..
T Consensus       189 ~~S~SK-~~g-~~G~R~G~i~~~~~~~  213 (330)
T TIGR01140       189 LRSLTK-FFG-LAGLRLGFVVAHPALL  213 (330)
T ss_pred             EEecch-hhc-CchhhhhheeCCHHHH
Confidence            999999 888 446  59999877543

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK09265 aminotransferase AlaT; Validated

Probab=99.13  E-value=2.9e-09  Score=104.18  Aligned_cols=158  Identities=12%  Similarity=0.082  Sum_probs=106.7

Q ss_pred             HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+|+++      ++++++  |+||+|+++++++++.++ +.+||+|+ +..+|..  +...++..|.++..++.+.
T Consensus        76 ~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~v~~~~~~  150 (404)
T PRK09265         76 SARKAIMQYYQQKGIPDVDVDD--IYIGNGVSELIVMAMQAL-LNNGDEVLVPAPDYPL--WTAAVSLSGGKPVHYLCDE  150 (404)
T ss_pred             HHHHHHHHHHhccCCCCCCccc--EEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCCcC--hHHHHHHcCCEEEEEeccc
Confidence            6889999988      777665  999999999999999887 57899876 4444441  2233445688888777653


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      + +..++.+++++.++++     +++|.+.  ++-||.++|   +++|.+ |+++|+++++|-+..-.   +.....+..
T Consensus       151 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  225 (404)
T PRK09265        151 EAGWFPDLDDIRSKITPR-----TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS  225 (404)
T ss_pred             ccCCCCCHHHHHHhcccc-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH
Confidence            2 3468899999888654     4555443  336999999   666644 68999999999875320   111122222


Q ss_pred             CCC--cE-EEEccccCcCCCCCc--eEEEEEe
Q 021539          273 HRP--DL-VLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       273 l~~--Df-l~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      +..  .. ++.|+=| .||.| |  +|+++..
T Consensus       226 ~~~~~~vi~~~S~SK-~~~~p-GlRiG~~v~~  255 (404)
T PRK09265        226 LAPDLLCVTFNGLSK-AYRVA-GFRVGWMVLS  255 (404)
T ss_pred             cCCCceEEEEecchh-hccCc-ccceEEEEEe
Confidence            222  23 3456679 88745 6  7999863

>PRK07337 aminotransferase; Validated

Probab=99.13  E-value=9.6e-10  Score=106.71  Aligned_cols=162  Identities=12%  Similarity=0.148  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++    |  ++++  +|++|+|+|+|+++++..+ ..+||.|+ ....+...  ...++..|.+++.+|.+
T Consensus        70 ~~lr~~ia~~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~  144 (388)
T PRK07337         70 APLREAIAAWYARRFGLDVAPE--RIVVTAGASAALLLACLAL-VERGDEVLMPDPSYPCN--RHFVAAAEGRPVLVPSG  144 (388)
T ss_pred             HHHHHHHHHHHHHHhCCCCChH--hEEEecCcHHHHHHHHHHh-cCCCCEEEEeCCCchhh--HHHHHHcCCEEEEeecC
Confidence            46888888887    4  4554  4999999999999999887 57899886 33343321  23344568899999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEeccccc-CccCc--ccCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGL-VFGED--QLALA  271 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQs-v~G~~--pldl~  271 (311)
                      .+ +..++.+++++.++++     +++|.++  ++-||..++.++   |.+ |+++|+++++|-+-. + ...  +..+.
T Consensus       145 ~~~~~~~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~-~~~~~~~~~~  218 (388)
T PRK07337        145 PAERFQLTAADVEAAWGER-----TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGL-SYDAAPVSAL  218 (388)
T ss_pred             CccCCcCCHHHHHhhcCcc-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccccc-ccCCCCcChh
Confidence            42 3468899999888764     3555543  336999998654   433 578999999996633 2 211  22332


Q ss_pred             CCCCcEE-EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 LHRPDLV-LCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~l~~Dfl-~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .+..+.+ +.|+.| .||.| |  +|++++.+++.
T Consensus       219 ~~~~~vi~~~S~SK-~~~~~-G~RiG~~~~~~~l~  251 (388)
T PRK07337        219 SLGDDVITINSFSK-YFNMT-GWRLGWLVVPEALV  251 (388)
T ss_pred             hccCCEEEEEechh-hcCCc-hhheeeeecCHHHH
Confidence            3345555 569999 88734 7  89999876543

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.13  E-value=1.2e-09  Score=106.71  Aligned_cols=164  Identities=10%  Similarity=0.050  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.||++++      ++++ .+|++|+|+++|+.+++..+ ..+||.|+. ...+. . ....++..|+++..+|.+
T Consensus        72 ~~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~-~-~~~~~~~~G~~~~~v~~~  147 (399)
T PRK07681         72 QEFHEAVTEYYNNTHNVILNAD-KEVLLLMGSQDGLVHLPMVY-ANPGDIILVPDPGYT-A-YETGIQMAGATSYYMPLK  147 (399)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEECCCCcc-c-hHHHHHhcCCEEEEEecC
Confidence            468899998885      4542 25999999999999999887 468998863 22332 1 223345679999999986


Q ss_pred             CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      .++ ..++.+.+++.+.++     +++|.++  ++=||.+++.++   |.+ |+++++++++|-+.+-.   +.....+.
T Consensus       148 ~~~~~~~d~~~l~~~~~~~-----~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~  222 (399)
T PRK07681        148 KENDFLPDLELIPEEIADK-----AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFL  222 (399)
T ss_pred             CCCCCcCCHHHHHHhcccc-----ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChh
Confidence            432 256888888877644     4565554  446999999655   433 58899999999998620   22222322


Q ss_pred             C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .    .+..+++-|+.| .|| ..|  +|+++..+++.
T Consensus       223 ~~~~~~~~~i~~~S~SK-~~~-~~GlRiG~~i~~~~l~  258 (399)
T PRK07681        223 SVPGAKEVGVEINSLSK-SYS-LAGSRIGYMIGNEEIV  258 (399)
T ss_pred             hCCCCcccEEEEeeccc-ccC-CccceeEEEecCHHHH
Confidence            1    134577889999 888 447  89998776543

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.13  E-value=5.7e-10  Score=106.93  Aligned_cols=162  Identities=15%  Similarity=0.118  Sum_probs=114.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..+.|+.+|+++++++++  |+||+|+++++.+++.++ +++|+.|+... .++ . ....+...|.++..+|.+  ++.
T Consensus        66 ~~~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~-~-~~~~~~~~g~~~~~~~~~--~~~  138 (359)
T PRK03158         66 APELRTKVAKHLGVDEEQ--LLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFS-Q-YRHNAIIEGAEVREVPLK--DGG  138 (359)
T ss_pred             HHHHHHHHHHHhCCCHHH--EEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHH-H-HHHHHHHcCCeEEEEecC--CCC
Confidence            457999999999997654  999999999999998887 46889886432 221 1 223345569999999986  456


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHH--CCcEEEecccccCc---cCccc--C-CCCCCC
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHR--NAWHVLLDATGLVF---GEDQL--A-LALHRP  275 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~---G~~pl--d-l~~l~~  275 (311)
                      ++.+++++.++++     ++++.+.  ++-||.++|.+++.+ ++.  +|+++++|-+..-.   +..+.  . +...+.
T Consensus       139 ~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~  213 (359)
T PRK03158        139 HDLEAMLKAIDEQ-----TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN  213 (359)
T ss_pred             cCHHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence            7899998887654     3455443  336999999999865 444  59999999998530   11111  1 122345


Q ss_pred             cEEEEccccCcCCCCCce--EEEEEeCCCC
Q 021539          276 DLVLCTLDNNTHAQPLKI--TCLLVRRKSF  303 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~Gi--G~L~vr~~~~  303 (311)
                      .+++.|+-| .|| ..|+  |+++..+++.
T Consensus       214 vi~~~S~SK-~~g-~~GlRiG~~v~~~~~~  241 (359)
T PRK03158        214 LIVLRTFSK-AYG-LAALRVGYGIASEELI  241 (359)
T ss_pred             EEEEEechH-hhc-CcchhhehhcCCHHHH
Confidence            688889999 888 4575  9998876544

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.13  E-value=8.4e-10  Score=107.60  Aligned_cols=168  Identities=15%  Similarity=0.144  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHcC----CCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHCG----LSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~Lg----a~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.++++++    +..+ +.+|++|+|+|+|+++++.++ ..+||.|+... .+. . ....++..|.++..+|.+.
T Consensus        70 ~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~~~~~~  146 (391)
T PRK07309         70 LELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAI-LEPGDKVLLPAPAYP-G-YEPIVNLVGAEIVEIDTTE  146 (391)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCc-c-hHHHHHHcCCEEEEEecCC
Confidence            467777777764    3211 235999999999999999887 56889886432 222 1 2233455699999998764


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCCC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALALH  273 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~l  273 (311)
                      .+..++.+.|+++++...+  +++++.++  ++-||+.++.+   +|.+ |+++++++++|.+..-.   |....++..+
T Consensus       147 ~~~~~d~~~l~~~~~~~~~--~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~  224 (391)
T PRK07309        147 NDFVLTPEMLEKAILEQGD--KLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY  224 (391)
T ss_pred             cCCcCCHHHHHHHhhccCC--CeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh
Confidence            3346889999988864211  24555554  34699998854   4443 58899999999997641   2122233222


Q ss_pred             CCc--EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          274 RPD--LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       274 ~~D--fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ..|  +++.|+.| .||.| |  +|+++..+++.
T Consensus       225 ~~~~~i~~~S~SK-~~g~~-GlRvG~~v~~~~~~  256 (391)
T PRK07309        225 LPDQTILINGLSK-SHAMT-GWRIGLIFAPAEFT  256 (391)
T ss_pred             ccCCEEEEecChh-hccCc-cceeEEEEeCHHHH
Confidence            233  88899999 88844 7  88899876553

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.13  E-value=1.8e-09  Score=104.54  Aligned_cols=164  Identities=12%  Similarity=-0.005  Sum_probs=111.5

Q ss_pred             HHHHHHHHHHcC----C--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG----L--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg----a--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++    .  +++ .+|++|+|+++++++++..+ ..+||.|+. ...+..  ....++..|.++..+|.+
T Consensus        70 ~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~G~~v~~v~~~  145 (383)
T TIGR03540        70 LAYRQAVADWYKRRFGVELDPE-TEVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDPGYPV--YRIGTLFAGGEPYEMPLK  145 (383)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcHHHHHHHHHHh-CCCCCEEEEeCCCCcc--hHHHHHhcCCEEEEEecC
Confidence            367888888763    4  332 25999999999999999987 478998863 333321  122345579999999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccC---ccCcccCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLV---FGEDQLALA  271 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv---~G~~pldl~  271 (311)
                      .+ +..++.+++++.++++     +++|.+.  ++-||..+|.+   +|.+ |+++++++++|-++.-   .+..+.++.
T Consensus       146 ~~~g~~~d~~~l~~~~~~~-----~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~  220 (383)
T TIGR03540       146 EENGFLPDFDAIPEDIAKK-----AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFL  220 (383)
T ss_pred             cccCCccCHHHHHhhcccc-----ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcc
Confidence            43 3356889998887654     3555544  33699999964   4543 6889999999999862   033334432


Q ss_pred             CC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 LH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .+    +..+++.|+=| .|| ..|  +|+++..+++.
T Consensus       221 ~~~~~~~~~i~~~SfSK-~~g-~~GlRiG~~i~~~~l~  256 (383)
T TIGR03540       221 EVDGAKDVGIEFHSLSK-TYN-MTGWRIGMAVGNADLI  256 (383)
T ss_pred             cCCCcccCEEEEEeccc-ccC-CccceeeEEeCCHHHH
Confidence            21    23466677779 998 558  99998776553

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.12  E-value=3.3e-09  Score=103.23  Aligned_cols=159  Identities=10%  Similarity=0.008  Sum_probs=109.8

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++.-....++.++++|++.|++.    .++++|+++|+.++.. + +.+||+|+.. ..+..  ..+....+..|+++..
T Consensus        47 ~r~~~pt~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~  120 (366)
T PRK08247         47 SRTGNPTRGVLEQAIADLEGGDQ----GFACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVY  120 (366)
T ss_pred             cCCCCchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEE
Confidence            33333445688899999999952    4667777899988764 3 4689998633 33332  2234445567999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++..      |.++++++++++     +++|.+  +.+-+|.+.++++|.+ ||++|+++++|.+++. +.....+ .++
T Consensus       121 vd~~------d~~~l~~~i~~~-----tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~-~~~~~p~-~~g  187 (366)
T PRK08247        121 VNTA------SLKAIEQAITPN-----TKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT-PVLQRPL-EEG  187 (366)
T ss_pred             ECCC------CHHHHHHhcccC-----ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-ccccCch-hcC
Confidence            8652      578888888764     456655  3335899999999966 6999999999999865 5433233 357


Q ss_pred             CcEEEEccccCcCCCCCc-eEEEEEe
Q 021539          275 PDLVLCTLDNNTHAQPLK-ITCLLVR  299 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G-iG~L~vr  299 (311)
                      +|+++.|+.| ++|++.+ +|.+++.
T Consensus       188 ~di~i~S~sK-~~~g~~d~~~G~iv~  212 (366)
T PRK08247        188 ADIVIHSATK-YLGGHNDVLAGLVVA  212 (366)
T ss_pred             CcEEEeecce-eccCCCceeeeEEec
Confidence            9999999999 6664654 3444443

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.11  E-value=4.5e-09  Score=105.15  Aligned_cols=155  Identities=8%  Similarity=0.007  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-h-HHHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-S-DYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-~-~~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...+.-.+.+|++.|+.  .  .+.|+|+|.|+.+++.++ +++||+|++... +. . ........+.|+++.++..  
T Consensus        61 Ptv~~lE~~la~leg~~--~--av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~--  133 (432)
T PRK06702         61 PTLAAFEQKLAELEGGV--G--AVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP--  133 (432)
T ss_pred             cHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC--
Confidence            33556788899999984  2  778999999999988877 689999875433 22 1 1222334667999988854  


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--CCCCcE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA--LHRPDL  277 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~--~l~~Df  277 (311)
                         .+|+++++++++++     |++|.+..-  -++.+.|+++|.+ ||++|+++++|+|-+.    |+-.+  ++++|+
T Consensus       134 ---~~d~~~l~~~I~~~-----Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P~~~~pl~~GADI  201 (432)
T PRK06702        134 ---NLTADEIVALANDK-----TKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----PYLCQAFEHGANI  201 (432)
T ss_pred             ---CCCHHHHHHhCCcC-----CeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----hhhCChhhcCCCE
Confidence               25778899999876     456554322  5899999999976 6999999999999654    33333  578999


Q ss_pred             EEEccccCcCCCCCceEEEEEe
Q 021539          278 VLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       278 l~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      ++-|.-||+-|.--++|.+++.
T Consensus       202 vv~S~TKy~~Ghsd~l~G~v~~  223 (432)
T PRK06702        202 IVHSTTKYIDGHASSLGGIVID  223 (432)
T ss_pred             EEEccccccCCCcceeceEEEe
Confidence            9999999655644467777764

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.11  E-value=6.9e-10  Score=105.81  Aligned_cols=158  Identities=16%  Similarity=0.128  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++.|+.||+++++++++  |++|+|+++++++++.++ ..+||.|+.. ..+ .+ ....++..|+++..+|.+. ++.+
T Consensus        63 ~~lr~aia~~~~~~~~~--I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y-~~-~~~~~~~~g~~~~~v~~~~-~~~~  136 (353)
T PRK05387         63 DALRQAIAAYYGLDPEQ--VFVGNGSDEVLAHAFLAF-FNHDRPLLFPDITY-SF-YPVYAGLYGIPYEEIPLDD-DFSI  136 (353)
T ss_pred             HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEeCCCH-HH-HHHHHHHcCCEEEEeecCC-CCCC
Confidence            48999999999998765  999999999999999987 4789988633 232 12 2333556799999999864 5668


Q ss_pred             CHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHC-CcEEEecccccCccCc-ccCC-CCCCCcEEEEc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRN-AWHVLLDATGLVFGED-QLAL-ALHRPDLVLCT  281 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~-g~~vlvDAaQsv~G~~-pldl-~~l~~Dfl~~S  281 (311)
                      |.+++++    +     ++++.+  +++-||.++|.+++.+ ++.. ++++++|-+.+-.+.. ...+ +..+-.+++.|
T Consensus       137 d~~~l~~----~-----~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S  207 (353)
T PRK05387        137 DVEDYLR----P-----NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQT  207 (353)
T ss_pred             CHHHHHh----c-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEe
Confidence            8887752    2     133433  2336999999999866 4443 9999999875421211 1111 22344799999


Q ss_pred             cccCcCCCCCc--eEEEEEeCCCC
Q 021539          282 LDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       282 ~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.| .||.| |  +|+++.+++..
T Consensus       208 ~SK-~~~~~-GlR~G~~~~~~~~~  229 (353)
T PRK05387        208 FSK-SRSLA-GLRVGFAIGHPELI  229 (353)
T ss_pred             hhH-hhcch-hhhceeeecCHHHH
Confidence            999 88733 5  89999876543

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.10  E-value=3.6e-10  Score=107.52  Aligned_cols=184  Identities=15%  Similarity=0.142  Sum_probs=119.3

Q ss_pred             cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHH-
Q 021539          105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDY-  183 (311)
Q Consensus       105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~-  183 (311)
                      ..+.+........+|.+....   ++++++|+++||.+  .  .+|++++|.|+.+++..+. ++++.|++...-|... 
T Consensus        11 m~~a~~~a~~gd~~Yg~D~~~---~~l~~~i~~l~g~e--~--a~f~~sGT~An~~al~~~~-~~~~~vi~~~~aHi~~~   82 (290)
T PF01212_consen   11 MLEAMAAANVGDDAYGEDPTT---ARLEERIAELFGKE--A--ALFVPSGTMANQLALRAHL-RPGESVICADTAHIHFD   82 (290)
T ss_dssp             EEHHHHHTTSB-CCTTSSHHH---HHHHHHHHHHHTSS--E--EEEESSHHHHHHHHHHHHH-HTTEEEEEETTEHHHHS
T ss_pred             HHHHHHccccCCcccCCChhH---HHHHHHHHHHcCCC--E--EEEeCCCChHHHHHHHHHH-hcCCceeccccceeeee
Confidence            334444444344466554443   47889999999984  2  6799999999999888775 5677776543323110 


Q ss_pred             -HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc-cc--cchhcHHHHH---H-HHHCCcEE
Q 021539          184 -IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV-VN--GTRYSMHWIS---E-AHRNAWHV  254 (311)
Q Consensus       184 -~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~-~t--G~i~Pi~~I~---~-a~~~g~~v  254 (311)
                       -.......|+++..++... +|.+++++|++.+++...+ .++++|+++.. +.  |+++++++|.   + ||++|+++
T Consensus        83 E~ga~~~~~G~~~~~l~~~~-~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~l  161 (290)
T PF01212_consen   83 ETGAIEELSGAKLIPLPSDD-DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPL  161 (290)
T ss_dssp             STTHHHHHTTCEEEEEBECT-GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EE
T ss_pred             ccchhhHhcCcEEEECCCcc-cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEE
Confidence             0111223699998888763 4899999999999863211 23678888755 45  9999998873   3 58999999


Q ss_pred             Eeccccc------CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          255 LLDATGL------VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       255 lvDAaQs------v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      |+||+=.      . |..+-++. ..+|.++||+.| -+|.| +=++|..+++
T Consensus       162 hmDGARl~~a~~~~-~~~~~e~~-~~~D~v~~~~tK-~~g~~-~Gavl~~~~~  210 (290)
T PF01212_consen  162 HMDGARLANAAAAL-GVSLAEIA-AGADSVSFGGTK-NGGAP-GGAVLAGNKE  210 (290)
T ss_dssp             EEEETTHHHHHCHH-HHHHHHHH-TTSSEEEEETTS-TT-SS-SEEEEEESHH
T ss_pred             EEehhhHHHhhhcc-cccHHHHh-hhCCEEEEEEEc-ccccc-cceEEEechH
Confidence            9999932      3 43444444 479999999999 55545 4566666654

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.10  E-value=2.8e-09  Score=104.30  Aligned_cols=160  Identities=16%  Similarity=0.070  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.+|++++.      +++  +|++|+|+|+|+.+++.++. .+|+.|+ ...++.  .+...++..|+++..++.
T Consensus        75 ~~~lr~~ia~~l~~~~~~~~~~~--~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~~  149 (403)
T TIGR01265        75 ALAAREAVAEYLSSDLPGKLTAD--DVVLTSGCSQAIEICIEALA-NPGANILVPRPGFP--LYDTRAAFSGLEVRLYDL  149 (403)
T ss_pred             CHHHHHHHHHHHHhhcCCCCCHH--HEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCch--hHHHHHHHcCCEEEEecC
Confidence            45789999999985      333  59999999999999999885 6889876 333322  123345667999988887


Q ss_pred             CC-CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCC
Q 021539          201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLAL  270 (311)
Q Consensus       201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl  270 (311)
                      +. .++.++.++++++++++     ++++.+++  +-||+++|   +++|.+ |+++|+++++|.+..-.   +.....+
T Consensus       150 ~~~~~~~~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~  224 (403)
T TIGR01265       150 LPEKDWEIDLDGLEALADEK-----TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPM  224 (403)
T ss_pred             CcccCCccCHHHHHHHhCcC-----ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccch
Confidence            43 24568999999888754     35555543  36999987   555644 68999999999996521   1111223


Q ss_pred             CCCCC---cEEEEccccCcCCCCCc--eEEEEEe
Q 021539          271 ALHRP---DLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       271 ~~l~~---Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      ..+..   =.++.|+=| .|+.| |  +|++++.
T Consensus       225 ~~~~~~~~vi~~~S~SK-~~~~p-GlRiG~~v~~  256 (403)
T TIGR01265       225 ASFASIVPVLSLGGISK-RWVVP-GWRLGWIIIH  256 (403)
T ss_pred             hhhccCCcEEEEeeccc-ccCCC-cceEEEEEEe
Confidence            22222   256679999 87756 5  8998874

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.09  E-value=3.7e-10  Score=108.55  Aligned_cols=161  Identities=16%  Similarity=0.035  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.|+.+|+++|+++++  |++|+|+++++++++.++. .+| +.|+...-... .....++..|++++.+|.+. +..+
T Consensus        63 ~~Lr~aia~~~~~~~~~--I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~P~y~-~y~~~~~~~g~~v~~v~~~~-~~~~  137 (354)
T PRK04635         63 PELINAYSAYAGVAPEQ--ILTSRGADEAIELLIRAFC-EPGQDSIACFGPTYG-MYAISAETFNVGVKALPLTA-DYQL  137 (354)
T ss_pred             HHHHHHHHHHhCcCHHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH-HHHHHHHHcCCEEEEEecCC-CCCC
Confidence            37899999999998765  9999999999999999884 566 77763221111 23344566799999999864 4567


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHH-CCcEEEecccccCccCcc---cCCCCC-CCcEEE
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHR-NAWHVLLDATGLVFGEDQ---LALALH-RPDLVL  279 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~G~~p---ldl~~l-~~Dfl~  279 (311)
                      +.+.++. + ++     +++|.++.  +-||+++|.+++.+ ++. .++++++|.++.- -...   .++... .-=+++
T Consensus       138 ~~~~l~~-~-~~-----~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv~  209 (354)
T PRK04635        138 PLDYIEQ-L-DG-----AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVVL  209 (354)
T ss_pred             CHHHHHh-c-cC-----CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEEE
Confidence            8887763 3 23     45665542  25999999999966 443 4699999999753 2111   111110 111467


Q ss_pred             EccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      -|++| +|| +.|  +|+++++++..+
T Consensus       210 ~S~SK-~~~-l~GlRlG~~i~~~~~~~  234 (354)
T PRK04635        210 RTLSK-AFA-LAGARCGFTLANEELIE  234 (354)
T ss_pred             echHH-Hhh-hhHHHHhhhhCCHHHHH
Confidence            79999 888 557  799998876544

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.09  E-value=1.4e-09  Score=106.07  Aligned_cols=162  Identities=15%  Similarity=0.093  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.|+.||+++|+++++  |++|+|++++++++...+ ..+|+.|+.. ..+.  .....++..|+++..+|.+. +..+
T Consensus        89 ~~lr~~ia~~~~~~~~~--I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~--~y~~~~~~~g~~~~~v~~~~-~~~~  162 (380)
T PLN03026         89 RRLRAALAEDSGLESEN--ILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFG--MYVFDAAVNGAEVIKVPRTP-DFSL  162 (380)
T ss_pred             HHHHHHHHHHhCcChhh--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCEEEEeecCC-CCCc
Confidence            47999999999998765  999999999999998887 4689988632 2321  12233455799999998864 4568


Q ss_pred             CHHHHHhhh-hccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cC-cccC-CCCCCCcEEEEc
Q 021539          208 KGSQLSQNF-RRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GE-DQLA-LALHRPDLVLCT  281 (311)
Q Consensus       208 d~~~L~~~l-~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~-~pld-l~~l~~Dfl~~S  281 (311)
                      +.++|++.+ ..+     ++++.+.  ++-||+++|.+++.++-+..+++++|.+..-. +. ..+. +...+-.+++.|
T Consensus       163 d~~~l~~~~~~~~-----~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~S  237 (380)
T PLN03026        163 DVPRIVEAVETHK-----PKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRT  237 (380)
T ss_pred             CHHHHHHHHhccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEec
Confidence            999998888 333     4555543  33699999999997753334899999996420 10 1111 222345688999


Q ss_pred             cccCcCCCCCc--eEEEEEeCCCC
Q 021539          282 LDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       282 ~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +-| .|| ..|  +|+++..++.+
T Consensus       238 fSK-~~g-laGlRiGy~~~~~~~i  259 (380)
T PLN03026        238 FSK-RAG-LAGLRVGYGAFPLSII  259 (380)
T ss_pred             chH-hhc-CccccceeeecCHHHH
Confidence            999 998 557  68877665443

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.08  E-value=1.5e-09  Score=105.76  Aligned_cols=163  Identities=12%  Similarity=0.046  Sum_probs=108.0

Q ss_pred             HHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+|+++    |.  +++ ..|++|+|+++|+.+++..+ +.+||.|+ ....+..  ....+...|.++..+|.+.
T Consensus        77 ~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~  152 (394)
T PRK05942         77 SFRQAITDWYHRRYGVELDPD-SEALPLLGSKEGLTHLALAY-VNPGDVVLVPSPAYPA--HFRGPLIAGAQIYPIILKP  152 (394)
T ss_pred             HHHHHHHHHHHHHHCCCcCCC-CeEEEccChHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEeecCC
Confidence            6788888877    43  343 24889999999999999887 57899986 3333332  1122344689999998864


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccC---
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLA---  269 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pld---  269 (311)
                      . +..++.+++++.+.++     ++++.++  ++-||.++|.+   +|.+ |+++|+++++|.+..-.   +.....   
T Consensus       153 ~~~~~~d~~~l~~~~~~~-----~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~  227 (394)
T PRK05942        153 ENDWLIDLSSIPEEVAQQ-----AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLE  227 (394)
T ss_pred             ccCCccCHHHHHHhcccc-----ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhh
Confidence            2 2358999998888654     4555543  33699999954   5544 68899999999985420   111122   


Q ss_pred             CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          270 LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       270 l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.. .+..+++.|+=| .|| ..|  +|+++.++++.
T Consensus       228 ~~~~~~~~i~~~SfSK-~~~-~~GlRiG~i~~~~~l~  262 (394)
T PRK05942        228 IPGAKDIGVEFHTLSK-TYN-MAGWRVGFVVGNRHII  262 (394)
T ss_pred             CCCccccEEEEecchh-ccC-ChhhheeeeecCHHHH
Confidence            211 123455667779 887 347  89999876554

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.08  E-value=9.5e-09  Score=99.68  Aligned_cols=161  Identities=16%  Similarity=0.183  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHc-----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHC-----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~L-----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .+.|+.+|+++     +++++  +|++|+|+|+|+++++..+ +.+|+.|+...-+..+. ...++..|+++..++.+..
T Consensus        69 ~~lr~~ia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~v~~~~~  144 (397)
T PRK07568         69 PELREAFAKYYKKWGIDVEPD--EILITNGGSEAILFAMMAI-CDPGDEILVPEPFYANY-NGFATSAGVKIVPVTTKIE  144 (397)
T ss_pred             HHHHHHHHHHHHHhCCCCCcc--eEEEcCChHHHHHHHHHHh-cCCCCEEEEecCCCccH-HHHHHHcCCEEEEeecCcc
Confidence            47888999987     46655  4999999999999999887 57899886433222222 2334556999999987532


Q ss_pred             Ccc--cCHHHHHhhhhccCCCCCceEEEEec--ccccchhcH---HHHHH-HHHCCcEEEecccccCc---cCccc---C
Q 021539          204 DLR--IKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF---GEDQL---A  269 (311)
Q Consensus       204 ~g~--id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~---G~~pl---d  269 (311)
                      ++.  .+.++|++.++++     +++|.++.  +-||.++|.   ++|.+ |+++|+++++|.+..-.   +....   +
T Consensus       145 ~g~~~~~~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~  219 (397)
T PRK07568        145 EGFHLPSKEEIEKLITPK-----TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALS  219 (397)
T ss_pred             cCCCCCCHHHHHHhcCcc-----ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhh
Confidence            332  2468888888654     45665543  369999975   45544 68999999999986521   11111   2


Q ss_pred             CCC-CCCcEEEEccccCcCCCC-CceEEEEEe
Q 021539          270 LAL-HRPDLVLCTLDNNTHAQP-LKITCLLVR  299 (311)
Q Consensus       270 l~~-l~~Dfl~~S~HK~l~G~P-~GiG~L~vr  299 (311)
                      +.. .+--+++-|+.| .||.| ..+|+++..
T Consensus       220 ~~~~~~~~i~~~S~SK-~~~~~G~R~G~~~~~  250 (397)
T PRK07568        220 LEGLEDRVIIIDSVSK-RYSACGARIGCLISK  250 (397)
T ss_pred             cCCCcCCEEEEecchh-hccCCCcceEEEecC
Confidence            211 112267789999 88733 238888764

>PRK07550 hypothetical protein; Provisional

Probab=99.07  E-value=2.2e-09  Score=104.10  Aligned_cols=163  Identities=13%  Similarity=0.090  Sum_probs=106.6

Q ss_pred             HHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-
Q 021539          130 QARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW-  202 (311)
Q Consensus       130 ~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~-  202 (311)
                      +.|+.++++++      ++++  +|++|+|+++|+.+++..+ ..+||.|+...=...+. ...++..|.++..++.+. 
T Consensus        71 ~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~v~~~~~  146 (386)
T PRK07550         71 ELREAYAAHYSRLYGAAISPE--QVHITSGCNQAFWAAMVTL-AGAGDEVILPLPWYFNH-KMWLDMLGIRPVYLPCDEG  146 (386)
T ss_pred             HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch-HHHHHhcCCEEEEEecCCC
Confidence            56666666653      4444  5999999999999999987 46899986432111111 223456799999999863 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCC-
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALAL-  272 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~-  272 (311)
                      .+..++.+++++.++++     +++|.+  +++-||.++|.+   +|.+ |+++|+++++|.+.+-.   +..+..+.. 
T Consensus       147 ~~~~~~~~~l~~~~~~~-----~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~  221 (386)
T PRK07550        147 PGLLPDPAAAEALITPR-----TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFAD  221 (386)
T ss_pred             cCCCCCHHHHHHHhccc-----CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhC
Confidence            24457889999988764     334333  333599999854   5544 68899999999986520   111111111 


Q ss_pred             ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                         ..-.+++.|+.| .+|.| |  +|+++..++.+
T Consensus       222 ~~~~~~~i~~~S~SK-~~g~~-G~RiG~i~~~~~~~  255 (386)
T PRK07550        222 PDWDDTLVHLYSFSK-SYALT-GHRVGAVVASPARI  255 (386)
T ss_pred             CCccccEEEEecchh-hccCc-ccceEeeecCHHHH
Confidence               112467899999 77733 5  99998876543

>PRK07683 aminotransferase A; Validated

Probab=99.06  E-value=4.7e-09  Score=102.26  Aligned_cols=164  Identities=15%  Similarity=0.119  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.+|+++    |.  +++ .+|++|+|+|+|+.++...+ +.+|+.|+...-...+ ....++..|+++..+|.+.
T Consensus        68 ~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~~~~~~  144 (387)
T PRK07683         68 LELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAPIYPG-YEPIIRLCGAKPVFIDTRS  144 (387)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCccc-hHHHHHHcCCEEEEeecCc
Confidence            46888888887    33  444 14999999999999999887 5789988643221112 2233455699999998865


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCc--cCcccCCCCC-
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF--GEDQLALALH-  273 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~l-  273 (311)
                      .+..++.+.+++.++++     ++++.++.  +-||..++.+   +|.+ |+++|+++++|.+..-.  +..+..+..+ 
T Consensus       145 ~~~~~~~~~l~~~~~~~-----~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~  219 (387)
T PRK07683        145 TGFRLTAEALENAITEK-----TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFP  219 (387)
T ss_pred             ccCCCCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhcc
Confidence            34456788888888654     35555542  3699998854   4434 58899999999997741  1112223222 


Q ss_pred             ---CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          274 ---RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       274 ---~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                         +-.+++.|+=| .||.| |  +|+++..+++
T Consensus       220 ~~~~~vi~~~s~SK-~~~~p-GlRiG~i~~~~~l  251 (387)
T PRK07683        220 EMREKTIVINGLSK-SHSMT-GWRIGFLFAPSYL  251 (387)
T ss_pred             CCcCCeEEEeeccc-cccCc-cceeEEEEcCHHH
Confidence               23588899999 88855 6  8999887654

>PRK08363 alanine aminotransferase; Validated

Probab=99.06  E-value=5.9e-09  Score=101.70  Aligned_cols=159  Identities=14%  Similarity=0.099  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEE-eC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAA-PE  200 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~v-p~  200 (311)
                      .+.|+.+++++    |  ++++  +|++|+|+|+|+.++..++ ..+||.|+.. ..+..  ....++..|.++..+ +.
T Consensus        73 ~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~v~~~~~  147 (398)
T PRK08363         73 PELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGPSYPP--YTGLVKFYGGVPVEYRTI  147 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEeccc
Confidence            36888888887    3  4554  5999999999999999888 6789998643 33321  223445567777666 45


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCc--cCcccCCCC
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--GEDQLALAL  272 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~  272 (311)
                      +.++..++.++|++.++++     ++++.+..  +-||..+|   +++|.+ |+++|+++++|.+..-.  ......+..
T Consensus       148 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~  222 (398)
T PRK08363        148 EEEGWQPDIDDIRKKITEK-----TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGS  222 (398)
T ss_pred             cccCCcCCHHHHHhhCCcc-----eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHH
Confidence            4334467888898888654     45665543  25999999   555644 68899999999986520  001111111


Q ss_pred             CC---CcEEEEccccCcCCCC-CceEEEEE
Q 021539          273 HR---PDLVLCTLDNNTHAQP-LKITCLLV  298 (311)
Q Consensus       273 l~---~Dfl~~S~HK~l~G~P-~GiG~L~v  298 (311)
                      +.   -=+++.|+.| .|+.| .++|++++
T Consensus       223 ~~~~~~vi~~~SfSK-~~~~~GlRiG~~~~  251 (398)
T PRK08363        223 LTKDVPVIVMNGLSK-VYFATGWRLGYIYF  251 (398)
T ss_pred             cCcCCcEEEEecchh-ccCCccceEEEEEE
Confidence            11   1255679999 76534 24899998

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.05  E-value=4.7e-09  Score=108.95  Aligned_cols=194  Identities=15%  Similarity=0.086  Sum_probs=122.3

Q ss_pred             cccchhHHHHh---cCCC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH---HHhc---CCC--C
Q 021539          103 QLEPSRLLDIL---SKKT--SFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLM---IGES---YPF--F  168 (311)
Q Consensus       103 ~~~~~~l~~~l---~~~s--s~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnl---v~~s---~~~--~  168 (311)
                      ...++-+-+++   .|++  ++. +..++.+++++=+.+++++|.++..  =+||+|+|+|+-.   +++.   +|+  +
T Consensus        94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~--G~~TsGGT~ANl~aL~~AR~~k~~p~a~~  171 (608)
T TIGR03811        94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGW--GHIVADGSLANLEGLWYARNIKSLPFAMK  171 (608)
T ss_pred             CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCC--eEEeCChHHHHHHHHHHHHHhhhccchhh
Confidence            34666666654   4544  332 3344455568999999999997533  5699999999754   3332   110  0


Q ss_pred             -------------------------------------------CCC------EEEEccCcChHHHHHHHHhCCc---EEE
Q 021539          169 -------------------------------------------KGN------YYLTIISEESDYIKGFAAQKES---KVI  196 (311)
Q Consensus       169 -------------------------------------------~Gd------~Ils~~eh~~~~~~~la~~~G~---~V~  196 (311)
                                                                 .|.      .++++...|.. +...+.-.|.   .|+
T Consensus       172 ~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS-~~KAa~ilGlG~~~vv  250 (608)
T TIGR03811       172 EVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS-WLKAADIIGIGLDQVI  250 (608)
T ss_pred             hccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHH-HHHHHHHcCCCcccEE
Confidence                                                       000      23444442322 3333444566   588


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCC-CCc-eEEEEecc-cccchhcHHHHHHH----HHCCc--EEEecccccCccC--
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKY-TPK-GLFSYPVV-VNGTRYSMHWISEA----HRNAW--HVLLDATGLVFGE--  265 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~-~~t-~LVs~~~~-~tG~i~Pi~~I~~a----~~~g~--~vlvDAaQsv~G~--  265 (311)
                      .||++. ++++|.+.|++.|++.... .++ .+|++... .+|.+=||++|.++    +++|+  ++|||||-.. --  
T Consensus       251 ~VpvD~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG-~~~~  328 (608)
T TIGR03811       251 PVPVDS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGG-YGRA  328 (608)
T ss_pred             EeecCC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccc-hhhh
Confidence            899986 7899999999888752111 112 23443333 69999999999663    46786  6999998663 11  


Q ss_pred             ---------cccC-----------C---------------C-CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          266 ---------DQLA-----------L---------------A-LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       266 ---------~pld-----------l---------------~-~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                               +|.+           +               + --++|-+++.+|| |+..|.++|+|++|+..
T Consensus       329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK-~g~~Py~~G~ll~Rd~~  400 (608)
T TIGR03811       329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK-MGYIPYSAGGIVIQDIR  400 (608)
T ss_pred             hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc-ccccCCCeEEEEEeCHH
Confidence                     1110           1               0 1369999999999 55559999999999753

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.05  E-value=1.4e-08  Score=99.74  Aligned_cols=178  Identities=13%  Similarity=0.058  Sum_probs=122.6

Q ss_pred             cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH
Q 021539          105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI  184 (311)
Q Consensus       105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~  184 (311)
                      +-..+.+.+...--..|.+.+.    --+.+|+++|+.  .  .+.|+|+|.|+.+.+.++...+||.|+++.--.....
T Consensus        17 e~~~v~~vl~sg~i~~G~~v~~----FE~~~ae~~G~k--~--ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa   88 (374)
T COG0399          17 ELAAVQEVLKSGWLTGGPFVRR----FEQAFAEYLGVK--Y--AVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA   88 (374)
T ss_pred             HHHHHHHHHHcCCeecChHHHH----HHHHHHHHhCCC--e--EEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH
Confidence            5555666664432223777764    334789999994  3  8899999999999999777889999864332221111


Q ss_pred             HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      .. .-..|++.+++.++.++..+|.+.|++.|.+++    +.++.+.  .-|..-+++.|.+ |+++|++++-||+|++ 
T Consensus        89 n~-i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~t----KAIipVh--l~G~~~dm~~i~~la~~~~l~vIEDaAqa~-  160 (374)
T COG0399          89 NA-VLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRT----KAIIPVH--LAGQPCDMDAIMALAKRHGLPVIEDAAQAH-  160 (374)
T ss_pred             HH-HHHcCCeEEEEecCCcccCCCHHHHHHHcccCC----eEEEEeh--hccCCCCHHHHHHHHHHcCCeEEEEcchhc-
Confidence            11 123599999999998778899999999999863    3444422  4799999999966 6999999999999999 


Q ss_pred             cCcccCCCC-CCCcEEEEccc--cCcCCCCCceEEEEEeCC
Q 021539          264 GEDQLALAL-HRPDLVLCTLD--NNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       264 G~~pldl~~-l~~Dfl~~S~H--K~l~G~P~GiG~L~vr~~  301 (311)
                      |..--+=.. .--|+-+||+|  | .++  .|=|++++.++
T Consensus       161 Ga~y~gk~vGt~Gd~~~fSF~~~K-~it--tgEGGav~tnd  198 (374)
T COG0399         161 GATYKGKKVGSFGDIGAFSFHATK-NLT--TGEGGAVVTND  198 (374)
T ss_pred             cCeecCcccccccceEEEEecCCC-Ccc--ccCceEEEeCC
Confidence            855432111 11355555554  7 554  46566665543

>PRK12414 putative aminotransferase; Provisional

Probab=99.03  E-value=1.5e-08  Score=98.52  Aligned_cols=167  Identities=10%  Similarity=0.082  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          127 PEIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ..+..++.+++++|++.+ +.+|++|+|+++|+.+++.++ +.+||.|+. ...+..  ....++..|.++..+|.+..+
T Consensus        71 lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~~  147 (384)
T PRK12414         71 LREALAEKTERLYGARYDPASEVTVIASASEGLYAAISAL-VHPGDEVIYFEPSFDS--YAPIVRLQGATPVAIKLSPED  147 (384)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHh-cCCCCEEEEeCCCccc--hHHHHHHcCCEEEEEecCccc
Confidence            335566666677787521 124999999999999999887 578999863 334331  223344568999999987545


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcH---HHHHH-HHHCCcEEEecccccCc--cCccc-CCCCC--
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF--GEDQL-ALALH--  273 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~--G~~pl-dl~~l--  273 (311)
                      ..++.+.|++.++++     +++|.++  ++-||.+++-   ++|.+ |+++|+++++|.+..-.  ...+. .+..+  
T Consensus       148 ~~~d~~~l~~~l~~~-----~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~  222 (384)
T PRK12414        148 FRVNWDEVAAAITPR-----TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE  222 (384)
T ss_pred             cccCHHHHHhhcCcc-----cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC
Confidence            568999999888754     4566554  3369998764   45543 58899999999997520  11111 22221  


Q ss_pred             --CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          274 --RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       274 --~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                        +--+++.|+-| .||.| |  +|+++..+++.
T Consensus       223 ~~~~~i~~~SfSK-~~~~p-GlRiG~~v~~~~l~  254 (384)
T PRK12414        223 LAERSVIVSSFGK-SYHVT-GWRVGYCLAPAELM  254 (384)
T ss_pred             ccCcEEEEecccc-cccCc-cceEEEEecCHHHH
Confidence              12389999999 88734 6  69998876543

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.02  E-value=6.7e-09  Score=100.60  Aligned_cols=164  Identities=13%  Similarity=0.049  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++    |.  +++ ..|++|+|+++++++++..+ ..+||.|+. ...+..  ....++..|.++..+|.+
T Consensus        72 ~~lr~aia~~~~~~~g~~~~~~-~~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~~~~v~~~  147 (385)
T PRK09276         72 LEFRKAVADWYKRRFGVELDPE-TEVISLIGSKEGIAHIPLAF-VNPGDVVLVPDPGYPV--YKIGTIFAGGEPYFMPLK  147 (385)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcC--hHHHHHHcCCEEEEEecC
Confidence            46888888887    44  333 24999999999999999887 478998863 223221  223345569999999986


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      .+ +..++.+++++.+..+     +++|.++  ++-||.++|.++   |.+ |+++++++++|-+..-.   ++....+.
T Consensus       148 ~~~g~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~  222 (385)
T PRK09276        148 EENGFLPDLDAIPEDVAKK-----AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFL  222 (385)
T ss_pred             CCCCCcCCHHHHHHhcccc-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChh
Confidence            43 2346888888777654     3555543  336999999754   433 58899999999998631   22222322


Q ss_pred             C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .    .+..+++.|+=| .|| ..|  +|+++..+++.
T Consensus       223 ~~~~~~~~~i~~~S~SK-~~g-~~GlRiG~~i~~~~l~  258 (385)
T PRK09276        223 EVPGAKDVGIEFHSLSK-TYN-MTGWRIGFAVGNADLI  258 (385)
T ss_pred             ccCCCcCCEEEEecchh-hcC-CcchhheeeeCCHHHH
Confidence            1    133467778889 998 558  99998776543

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.01  E-value=1.2e-08  Score=102.16  Aligned_cols=177  Identities=12%  Similarity=0.056  Sum_probs=116.9

Q ss_pred             HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHH
Q 021539          109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFA  188 (311)
Q Consensus       109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la  188 (311)
                      +..|....++|.+..-.   .+.|+.|++++|.+  .  +++|+|+|+|++++...+ .++||.|++. -|... .....
T Consensus        39 ~~a~~~gd~~Y~~~~g~---~~Leeaia~~~g~~--~--vv~t~~Gt~Al~la~~al-~~pGD~V~~~-~~f~~-~~~~i  108 (431)
T cd00617          39 WAAMMLGDEAYAGSKSF---YDLEDAVQDLFGFK--H--IIPTHQGRGAENILFSIL-LKPGRTVPSN-MHFDT-TRGHI  108 (431)
T ss_pred             HHHHHhCCCccCCCCCH---HHHHHHHHHHHCCC--e--EEEcCCHHHHHHHHHHHh-CCCCCEEccC-Ccccc-hHHHH
Confidence            33344555677665543   36788899999984  3  999999999999988877 5789987522 22211 11223


Q ss_pred             HhCCcEEEEEeCCCC---------CcccCHHHHHhhhhccCCCCCceEEEE--ecccc-cchhcHHHH---HH-HHHCCc
Q 021539          189 AQKESKVIAAPETWL---------DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVN-GTRYSMHWI---SE-AHRNAW  252 (311)
Q Consensus       189 ~~~G~~V~~vp~~~~---------~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~t-G~i~Pi~~I---~~-a~~~g~  252 (311)
                      ...|.++..++++..         .+.+|+++|+++++++.. ..+++|++  +.+.+ |...+++.+   .+ |+++|+
T Consensus       109 ~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~-~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi  187 (431)
T cd00617         109 EANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA-ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGI  187 (431)
T ss_pred             HhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC-CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCC
Confidence            345888888887531         356899999999986421 12455554  44444 898877654   44 689999


Q ss_pred             EEEecccccCcc-----------CcccCCCC------CCCcEEEEccccCcCCCCCceEE-EEEeC
Q 021539          253 HVLLDATGLVFG-----------EDQLALAL------HRPDLVLCTLDNNTHAQPLKITC-LLVRR  300 (311)
Q Consensus       253 ~vlvDAaQsv~G-----------~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~-L~vr~  300 (311)
                      +++.|++|++ +           .....+.+      .-.|.+++|+|| -.+.|  +|. ++.++
T Consensus       188 ~li~DaAr~~-~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K-~~~~~--~GG~i~~~d  249 (431)
T cd00617         188 PVVLDAARFA-ENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKK-DGLVN--IGGFLALRD  249 (431)
T ss_pred             EEEEEchhhH-hhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeec-CCCCc--cceEEEeCc
Confidence            9999999986 4           22222211      248999999999 44434  464 55544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK07777 aminotransferase; Validated

Probab=99.01  E-value=1.1e-08  Score=99.26  Aligned_cols=163  Identities=17%  Similarity=0.074  Sum_probs=108.3

Q ss_pred             HHHHHHHHH----cCCC--CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKH----CGLS--EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~----Lga~--~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.++++    .|.+  ++ .+|++|+|+|+|+.+++.++ ..+||.|+.. ..++ . ....++..|.++..+|.+.
T Consensus        65 ~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p~y~-~-~~~~~~~~g~~~~~~~~~~  140 (387)
T PRK07777         65 ELRAAIAAQRRRRYGLEYDPD-TEVLVTVGATEAIAAAVLGL-VEPGDEVLLIEPYYD-S-YAAVIAMAGAHRVPVPLVP  140 (387)
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CcEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch-h-hHHHHHHCCCEEEEeecCC
Confidence            466666654    5654  33 14999999999999988877 4688988643 2332 2 2233445688888888764


Q ss_pred             C--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cC--cccC
Q 021539          203 L--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GE--DQLA  269 (311)
Q Consensus       203 ~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~--~pld  269 (311)
                      .  +..++.++|++.++++     +++|.++  ++-||..++.+   +|.+ |+++++++++|-+..-.   +.  .++.
T Consensus       141 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~  215 (387)
T PRK07777        141 DGRGFALDLDALRAAVTPR-----TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA  215 (387)
T ss_pred             ccCCCcCCHHHHHHhcCcc-----cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence            2  2358999999888754     4565554  33699998854   4443 68899999999887520   11  1221


Q ss_pred             -CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          270 -LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       270 -l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       +.. .+.++++.|+.| .||.| |  +|+++..+++.
T Consensus       216 ~~~~~~~~~i~~~S~SK-~~g~~-GlRiG~~~~~~~l~  251 (387)
T PRK07777        216 TLPGMRERTVTISSAAK-TFNVT-GWKIGWACGPAPLI  251 (387)
T ss_pred             hCCCCcCcEEEEeechh-hccCc-CceeEEEecCHHHH
Confidence             111 346899999999 88844 7  69888776543

>PRK07682 hypothetical protein; Validated

Probab=99.00  E-value=3.6e-09  Score=102.22  Aligned_cols=164  Identities=10%  Similarity=0.047  Sum_probs=111.5

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      +++++ +|++|+|+++|+.+++.++ .++||.|+. ...++ . ....++..|.++..++.+
T Consensus        60 ~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p~y~-~-~~~~~~~~g~~~~~~~~~  135 (378)
T PRK07682         60 LELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQALDVAMRAI-INPGDEVLIVEPSFV-S-YAPLVTLAGGVPVPVATT  135 (378)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEeecC
Confidence            468888888874      33432 4999999999999999887 478998863 33333 1 223344568888888875


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCccCc---ccC--
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGED---QLA--  269 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~---pld--  269 (311)
                      .+ +..++.+.|++.+.++     ++++.+  +++-||.++|.+   +|.+ |+++++++++|.++.- ...   ...  
T Consensus       136 ~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~  209 (378)
T PRK07682        136 LENEFKVQPAQIEAAITAK-----TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE-LTYDEAYTSFA  209 (378)
T ss_pred             CccCCCCCHHHHHhhcCcc-----cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh-cccCCCCCChh
Confidence            32 3468899999888754     344433  344699999855   4544 5889999999999774 211   111  


Q ss_pred             -CCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          270 -LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       270 -l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                       +.. .+-.+++.|+-| .||. .|  +|+++.++++++
T Consensus       210 ~~~~~~~~~i~~~S~SK-~~~~-~GlR~G~~~~~~~~i~  246 (378)
T PRK07682        210 SIKGMRERTILISGFSK-GFAM-TGWRLGFIAAPVYFSE  246 (378)
T ss_pred             hcccccCCEEEEecCcc-cccC-hhhhhhhhhcCHHHHH
Confidence             111 134688999999 8884 47  899998765543

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.00  E-value=4.4e-09  Score=100.72  Aligned_cols=160  Identities=14%  Similarity=0.126  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..+.|+.+|+++|+++++  |++|+|+++++++++..+   +|+.|+.. ..+.  .....++..|+++..++.+. +..
T Consensus        57 ~~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~  128 (337)
T PRK03967         57 SDPLREAIAEFYGLDAEN--IAVGNGSDELISYLVKLF---EGKHIVITPPTFG--MYSFYAKLNGIPVIDVPLKE-DFT  128 (337)
T ss_pred             HHHHHHHHHHHhCcCcce--EEEcCCHHHHHHHHHHHh---CCCeEEEeCCChH--HHHHHHHHcCCeEEEeecCC-CCC
Confidence            357999999999998765  999999999999998876   58887632 2322  23334566799999999864 456


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cCcccCC-CCCCCcEEEEcc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GEDQLAL-ALHRPDLVLCTL  282 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~~pldl-~~l~~Dfl~~S~  282 (311)
                      ++.+.+++.+. +     ++++.++  ++-||.++|.+++.++-++++++++|.+..-. +...+.+ ....-=+++.|+
T Consensus       129 ~d~~~l~~~~~-~-----~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~  202 (337)
T PRK03967        129 IDGERIAEKAK-N-----ASAVFICSPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTF  202 (337)
T ss_pred             cCHHHHHHhcc-C-----CCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHHHhhCCCEEEEecc
Confidence            88888877653 2     2444443  33699999999997753579999999987520 2111111 111123677899


Q ss_pred             ccCcCCCCCc--eEEEEEeCCCC
Q 021539          283 DNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       283 HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      =| .||.| |  +|+++..++..
T Consensus       203 SK-~~~l~-GlRiG~iv~~~~~i  223 (337)
T PRK03967        203 SK-AFGLA-GIRAGYAIANEEII  223 (337)
T ss_pred             hH-hhcch-hhhheeeecCHHHH
Confidence            99 88844 5  89999876543

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.00  E-value=1e-08  Score=99.25  Aligned_cols=157  Identities=16%  Similarity=0.195  Sum_probs=110.3

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      +.|+.+|+++|+++++  |++|+|+++++++++.++ +++||.|+.. ..+.  .....++..|+++..+|.+. +..++
T Consensus        75 ~lr~~ia~~~~~~~~~--i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~~~  148 (371)
T PRK05166         75 ALREAIAARTGVPADR--IILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFP--LHEDYPTMMGARVERVTVTP-DLGFD  148 (371)
T ss_pred             HHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCeEEEeecCC-CCCCC
Confidence            6899999999997654  999999999999999887 5789988643 2222  12344566799999999874 45789


Q ss_pred             HHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HH--HCCcEEEecccccCc--cCcc---cC-CCCC-CCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AH--RNAWHVLLDATGLVF--GEDQ---LA-LALH-RPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~--G~~p---ld-l~~l-~~D  276 (311)
                      .+++++.++++     +++|.++.  +-||.++|.+++.+ ++  +.++++++|.+-.-.  +...   +. +... .--
T Consensus       149 ~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v  223 (371)
T PRK05166        149 LDALCAAVARA-----PRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW  223 (371)
T ss_pred             HHHHHHhhhcC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence            99999888764     35666543  25999999988754 33  358899999986520  1110   11 1111 123


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEe
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      +++.|+=| .||.| |  +|++++.
T Consensus       224 i~i~SfSK-~~~l~-GlRiG~~i~~  246 (371)
T PRK05166        224 IVLRTFSK-AYGLA-GLRVGYGLVS  246 (371)
T ss_pred             EEEeechH-hhhcc-hhheeeeecC
Confidence            78899999 88744 6  7988764

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.00  E-value=1.2e-08  Score=103.61  Aligned_cols=160  Identities=13%  Similarity=0.123  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.||+++      ++++++  |++|+|+++++++++.++ ..+||.|+. ...+..  ....++..|.++..++.
T Consensus       187 ~~~lReaia~~~~~~~~~~~~~~~--I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~~--y~~~~~~~g~~~v~~~~  261 (517)
T PRK13355        187 LFSARKAIMQYAQLKGLPNVDVDD--IYTGNGVSELINLSMSAL-LDDGDEVLIPSPDYPL--WTACVNLAGGTAVHYRC  261 (517)
T ss_pred             hHHHHHHHHHHHHhcCCCCCChhH--EEEeCcHHHHHHHHHHHh-CCCCCEEEEcCCCCcC--HHHHHHHCCCEEEEeec
Confidence            457999999998      677665  999999999999999887 578999863 333331  22334556899888887


Q ss_pred             CCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcH---HHHHH-HHHCCcEEEecccccCc---cCcccCC
Q 021539          201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSM---HWISE-AHRNAWHVLLDATGLVF---GEDQLAL  270 (311)
Q Consensus       201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl  270 (311)
                      +.. +..+|.++|++.++++     ++++.+  +++=||.++|.   ++|.+ |+++++++++|-+-.-.   |.....+
T Consensus       262 ~~~~~~~~d~~~l~~~~~~~-----~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~  336 (517)
T PRK13355        262 DEQSEWYPDIDDIRSKITSR-----TKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI  336 (517)
T ss_pred             CcccCCCCCHHHHHHhcCcC-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccH
Confidence            642 3467899999888765     344433  34469999994   45543 68899999999985410   2222233


Q ss_pred             CCCCCcE--E-EEccccCcCCCCCc--eEEEEEe
Q 021539          271 ALHRPDL--V-LCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       271 ~~l~~Df--l-~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      ..+..|.  + +.|+-| .|| ..|  +|.+++.
T Consensus       337 ~~~~~~~~vi~~~S~SK-~~~-~~G~RiG~~i~~  368 (517)
T PRK13355        337 ASLAPDLFCVTFSGLSK-SHM-IAGYRIGWMILS  368 (517)
T ss_pred             HHhCCCCeEEEEecchh-hcc-CcccceEEEEee
Confidence            3333443  2 357789 877 336  8999864

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=98.98  E-value=5.2e-09  Score=104.16  Aligned_cols=169  Identities=12%  Similarity=0.061  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC--
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL--  203 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~--  203 (311)
                      ..+.+|.+.+|+++|++.   ....|.|+|.|+..++.+. .++||.|+..-.-|-+.+..+. -.|++.++++...+  
T Consensus        66 G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~ali-l~ga~Pvyi~p~~~~~  140 (417)
T PF01276_consen   66 GIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNALI-LSGAIPVYIPPEDNEY  140 (417)
T ss_dssp             THHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHHH-HHTEEEEEEEEEE-TT
T ss_pred             cHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHHH-HcCCeEEEecCCcccc
Confidence            345689999999999963   3555678888888887766 4789999866654433333322 23888888764321  


Q ss_pred             --CcccCH-----HHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC-----
Q 021539          204 --DLRIKG-----SQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA-----  269 (311)
Q Consensus       204 --~g~id~-----~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld-----  269 (311)
                        -+.|+.     +.+++++++.+.....++|.++.- --|+..++++|.+ ||++|++++||.||..  |..+.     
T Consensus       141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F~~lp~~  218 (417)
T PF01276_consen  141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGA--HFGFHPLPRS  218 (417)
T ss_dssp             S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-T--TGGCSGGGTT
T ss_pred             CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccc--cccCCCCccc
Confidence              124566     889999986542211234555544 4899999999965 7999999999999984  43333     


Q ss_pred             CCCCCCc-------EEEEccccCcCCCCCceEEEEEeCCC
Q 021539          270 LALHRPD-------LVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       270 l~~l~~D-------fl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      --.+++|       +++-|.|| .+++-+....|.++.+.
T Consensus       219 a~~~gad~~~~~~~~vvqS~HK-tL~altQts~lh~~~~~  257 (417)
T PF01276_consen  219 ALALGADRPNDPGIIVVQSTHK-TLPALTQTSMLHVKGDR  257 (417)
T ss_dssp             CSSTTSS-CTSBEEEEEEEHHH-HSSS-TT-EEEEEETCC
T ss_pred             hhhccCccccccceeeeechhh-cccccccceEEEecCCC
Confidence            3347899       99999999 77778899999999986

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=98.97  E-value=5.6e-09  Score=100.10  Aligned_cols=163  Identities=14%  Similarity=0.050  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+.|+.+|+++|.+++ .+|++|+|+++++.+++..+ ..+||.|+...= .-......++..|++++.+|.+. ++.++
T Consensus        66 ~~lr~~ia~~~~~~~~-~~I~~t~G~~~~i~~~~~~~-~~~gd~vlv~~P-~y~~~~~~~~~~g~~~~~i~~~~-~~~~d  141 (356)
T PRK04870         66 AALKAALRAAMGVPAG-ADVLLGNGSDELIQLLALAC-AKPGATVLAPEP-GFVMYRMSAKLAGLEFVGVPLTA-DFTLD  141 (356)
T ss_pred             HHHHHHHHHHhCcCCC-CcEEEcCCHHHHHHHHHHHh-cCCCCEEEECCC-CHHHHHHHHHHcCCEEEEecCCC-CCCCC
Confidence            5799999999998753 25999999999999998877 368898864321 11123445667799999999874 56789


Q ss_pred             HHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH-HHCCcEEEecccccCccCcc-c-CCCCCCCcEEEEccc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQ-L-ALALHRPDLVLCTLD  283 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~p-l-dl~~l~~Dfl~~S~H  283 (311)
                      .++|++.+.++    +++++.++  ++-||..+|.+++.++ +..+.++++|.+..-..... . .+...+--+++.|+.
T Consensus       142 ~~~l~~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~S  217 (356)
T PRK04870        142 LPAMLAAIAEH----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVS  217 (356)
T ss_pred             HHHHHHHhhcC----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecch
Confidence            99999988642    14565544  3369999999998664 44488899998764212111 1 122333358899999


Q ss_pred             cCcCCCCCc--eEEEEEeCCC
Q 021539          284 NNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       284 K~l~G~P~G--iG~L~vr~~~  302 (311)
                      | + | ..|  +|+++..++.
T Consensus       218 K-~-~-~~GlRiG~~i~~~~~  235 (356)
T PRK04870        218 K-L-G-LAGLRLGYLAGHPAW  235 (356)
T ss_pred             h-h-h-hHHHhhhhhhCCHHH
Confidence            9 4 5 347  9999876644

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=98.96  E-value=1.6e-08  Score=98.08  Aligned_cols=157  Identities=17%  Similarity=0.114  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cC--cChHHHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-IS--EESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~e--h~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...++.++.+|+++|+++++  +++|+|+++|+..++.++. .+||.|+.. .+  .|.. +...++..|.++..  .+ 
T Consensus        54 ~~~~~Le~~lA~~~g~~~e~--ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s-~~~~~~l~ga~~~~--~~-  126 (346)
T TIGR03576        54 IFEEKVQELGREHLGGPEEK--ILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPS-IPRSCKLAGAEYFE--SD-  126 (346)
T ss_pred             HHHHHHHHHHHHHcCCCcce--EEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchh-HHHHHHHcCCEEec--cC-
Confidence            45578999999999997665  9999999999999998884 689998742 22  2222 22334445776522  21 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch---hcHHHHHH-HHHCCcEEEecccccCccCccc----CCCCC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR---YSMHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALH  273 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i---~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l  273 (311)
                           +.++++. . ++     +++|.++.. .+|.+   .|+++|.+ ++++|+++++|-+++. |....    .....
T Consensus       127 -----~l~~l~~-~-~~-----~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~-~~~~~~~~~~~~~~  193 (346)
T TIGR03576       127 -----ELSELKK-I-DG-----TSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA-RVRRLYGQPPALDL  193 (346)
T ss_pred             -----CHHHHhh-C-cC-----ceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc-cccccCCCCCHHHc
Confidence                 2333322 1 11     456666544 47877   67888755 6889999999999997 64221    12234


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++|+++.|++|++-| +. .|+++.++++++
T Consensus       194 ~~divv~s~SKalaG-~r-~G~v~~~~~li~  222 (346)
T TIGR03576       194 GADLVVTSTDKLMDG-PR-GGLLAGRKELVD  222 (346)
T ss_pred             CCcEEEeccchhccc-cc-eEEEEeCHHHHH
Confidence            679999999994336 75 688888776543

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK09082 methionine aminotransferase; Validated

Probab=98.96  E-value=1.9e-08  Score=97.89  Aligned_cols=164  Identities=11%  Similarity=0.058  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          129 IQARNRALKHCGLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ++..+.+.+++|.+.+. .+|++|+|+|+|+.+++.++ ..+||.|+.. ..+. . ....++..|.++..+|.+..+..
T Consensus        74 ~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~p~y~-~-~~~~~~~~g~~~~~~~~~~~~~~  150 (386)
T PRK09082         74 EAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFDPSYD-S-YAPAIELAGGRAVRVALQPPDFR  150 (386)
T ss_pred             HHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCch-h-hHHHHHHcCCEEEEEecCccccc
Confidence            45555555667775432 25999999999999999887 4689988633 2332 1 22334456999999998644567


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCC---C-C
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALA---L-H  273 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~---~-l  273 (311)
                      ++.+++++.++++     +++|.++  ++-||..++.+   +|.+ |+++++++++|.+..-.   +.....+.   . .
T Consensus       151 ~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~  225 (386)
T PRK09082        151 VDWQRFAAAISPR-----TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELR  225 (386)
T ss_pred             CCHHHHHHhcCcc-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCcc
Confidence            8999999888764     4565554  33699886654   4443 68999999999987420   11112221   1 2


Q ss_pred             CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +-.+++.|+-| .||.| |  +|+++..+++
T Consensus       226 ~~~i~~~S~SK-~~~~~-G~RiG~iv~~~~l  254 (386)
T PRK09082        226 ERAFVVSSFGK-TYHVT-GWKVGYCVAPAAL  254 (386)
T ss_pred             CcEEEEeechh-hccch-hhhhhhhhCCHHH
Confidence            34688899999 88744 7  7988876544

>PRK06207 aspartate aminotransferase; Provisional

Probab=98.95  E-value=2e-08  Score=98.69  Aligned_cols=163  Identities=15%  Similarity=0.142  Sum_probs=107.4

Q ss_pred             HHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC----C
Q 021539          130 QARNRALKHCGLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW----L  203 (311)
Q Consensus       130 ~aR~~IA~~Lga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~----~  203 (311)
                      ...+.+++++|.+.+. .+|++|+|+++++.+++..+ ..+||.|+. ...+..  ....++..|.++..+|++.    .
T Consensus        86 aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~~~~~~~~~  162 (405)
T PRK06207         86 LLAARLAAFTGAPVDAADELIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA--NRKLVEFFEGEMVPVQLDYLSADK  162 (405)
T ss_pred             HHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEEeccccCccc
Confidence            3334444445853222 35999999999999999887 478999863 233321  2344566799998888752    1


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCCCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALALHR  274 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~l~  274 (311)
                      +..++.++|+++++++     +++|.+  +++-||.++|.++   |.+ |+++|+++++|-+-+-.   |.....+..+.
T Consensus       163 ~~~~d~~~l~~~~~~~-----~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~  237 (405)
T PRK06207        163 RAGLDLDQLEEAFKAG-----VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP  237 (405)
T ss_pred             CCCcCHHHHHHhhhhc-----CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCC
Confidence            3458899999888764     344433  4446999999665   433 58899999999986531   21112222222


Q ss_pred             Cc----EEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          275 PD----LVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       275 ~D----fl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .|    +++.|+-| .||.| |  +|.++..+++
T Consensus       238 ~~~~~vi~i~SfSK-~~~lp-GlRiG~ii~~~~l  269 (405)
T PRK06207        238 IDPENVITIMGPSK-TESLS-GYRLGVAFGSPAI  269 (405)
T ss_pred             CCcCcEEEEecchh-hccCc-ccceEEEEcCHHH
Confidence            22    78899999 88844 7  9998876544

>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]

Probab=98.95  E-value=3.9e-10  Score=115.26  Aligned_cols=170  Identities=30%  Similarity=0.466  Sum_probs=136.6

Q ss_pred             HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcCh---HHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          131 ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEES---DYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       131 aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~---~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.++-.+|+.+.++|..+||.+-..+..+.++++++.-...+++..+|+.   +++++.|+.+|.++.-.-..|++..+
T Consensus       181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~l  260 (728)
T KOG2142|consen  181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLYL  260 (728)
T ss_pred             eeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHHH
Confidence            677889999999999999999999999999999999765445678888883   34566677789998888888887777


Q ss_pred             CHHHHHhhhhccCCCC---CceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccC---CCCCCCcEEE
Q 021539          208 KGSQLSQNFRRKCKYT---PKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLA---LALHRPDLVL  279 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~---~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pld---l~~l~~Dfl~  279 (311)
                      --+.|++.+..++...   ...|+.++..  +||.+.++.|...+.+++|++++|+-|.  |--.+|   ++...|||..
T Consensus       261 ~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~l--G~kdmd~yglS~f~Pdfqg  338 (728)
T KOG2142|consen  261 LSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALAL--GPKDMDSYGLSLFQPDFQG  338 (728)
T ss_pred             HHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhcc--CcchHhhhhhhccCcccee
Confidence            7778888887543221   2467888877  6999999999999999999999999877  333332   3456799999


Q ss_pred             EccccCcCCC--CCceEEEEEeCCCC
Q 021539          280 CTLDNNTHAQ--PLKITCLLVRRKSF  303 (311)
Q Consensus       280 ~S~HK~l~G~--P~GiG~L~vr~~~~  303 (311)
                      .++++ .+|.  |.|.|||.|++-.+
T Consensus       339 ~sf~f-v~g~d~psgfGcl~VkKs~i  363 (728)
T KOG2142|consen  339 PSFYF-VFGRDDPSGFGCLEVKKSAI  363 (728)
T ss_pred             eeEEE-EeccCCCCceeeeeeehhhh
Confidence            99999 8876  68999999998764

>PLN02822 serine palmitoyltransferase

Probab=98.94  E-value=2.3e-08  Score=101.06  Aligned_cols=163  Identities=12%  Similarity=0.125  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ....+.++++|++++.. +  .|+|++|++ ++..++.++. ++||.|+.....|.... ...+-.+.++.+++.+.   
T Consensus       154 ~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a~~sai~a~~-~~gd~Ii~d~~~H~s~~-~~~~ls~~~~~~~~~nd---  224 (481)
T PLN02822        154 DVHLDCETKIAKFLGTP-D--SILYSYGLS-TIFSVIPAFC-KKGDIIVADEGVHWGIQ-NGLYLSRSTIVYFKHND---  224 (481)
T ss_pred             HHHHHHHHHHHHHhCCC-C--EEEECCHHH-HHHHHHHHhC-CCCCEEEEeCCccHHHH-HHHHHcCCeEEEECCCC---
Confidence            34569999999999974 3  499998888 5666777773 67888875444442222 12223467888887652   


Q ss_pred             ccCHHHHHhhhhc---cC--CCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------c
Q 021539          206 RIKGSQLSQNFRR---KC--KYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------L  268 (311)
Q Consensus       206 ~id~~~L~~~l~~---~~--~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------l  268 (311)
                         .++++..++.   ..  ++..+++|.+...  .+|.+.|+++|.+ ++++|+++++|-+|+. |...         .
T Consensus       225 ---~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~-gvlG~~G~G~~e~~  300 (481)
T PLN02822        225 ---MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSF-GVLGKSGRGLSEHF  300 (481)
T ss_pred             ---HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCChHHHc
Confidence               3344443331   10  0111356666444  4899999999976 6999999999999996 6421         3


Q ss_pred             CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       269 dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++....+|+++.|+.| -+| +.| |+++.+++..+
T Consensus       301 ~v~~~~~dii~~s~sK-alg-~~G-G~i~g~~~ii~  333 (481)
T PLN02822        301 GVPIEKIDIITAAMGH-ALA-TEG-GFCTGSARVVD  333 (481)
T ss_pred             CCCCCCCeEEEecchh-hhh-hCC-eEEEcCHHHHH
Confidence            3433468999999999 778 667 88887766543

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=98.93  E-value=6.8e-08  Score=97.15  Aligned_cols=178  Identities=11%  Similarity=0.063  Sum_probs=108.4

Q ss_pred             HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHH
Q 021539          109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFA  188 (311)
Q Consensus       109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la  188 (311)
                      +..+...--+|-|+..-.   +-.+.+++++|..  .  +++|+|+|.|++++ ..+..++||.| +...|... .+.-.
T Consensus        64 ~a~~~vGDd~Yagd~s~~---~LE~~vAe~lG~e--~--aV~v~sGTaAl~ll-~~l~v~pGd~V-p~n~~f~T-t~ahI  133 (460)
T PRK13237         64 WAGMMIGDEAYAGSRNFY---HLEETVQEYYGFK--H--VVPTHQGRGAENLL-SRIAIKPGQYV-PGNMYFTT-TRYHQ  133 (460)
T ss_pred             HHHHhhcchhhcCCCcHH---HHHHHHHHHHCCC--e--EEEeCCHHHHHHHH-HHhCCCCcCEE-CCccchHh-hHHHH
Confidence            444444445566665544   4455689999984  3  99999999999986 44456789875 33333311 11111


Q ss_pred             HhCCcEEEEEe---------CCCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccc-cchhc---HHHHHH-HHHCCc
Q 021539          189 AQKESKVIAAP---------ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVN-GTRYS---MHWISE-AHRNAW  252 (311)
Q Consensus       189 ~~~G~~V~~vp---------~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~t-G~i~P---i~~I~~-a~~~g~  252 (311)
                      ...|....-+.         .+..++.+|+++|++.++++.. ..++|+++  +.+.. |...|   +++|.+ |+++|+
T Consensus       134 ~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~-~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl  212 (460)
T PRK13237        134 ELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI  212 (460)
T ss_pred             HhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC
Confidence            33466332221         1123678999999999986421 22445543  33344 66654   566755 699999


Q ss_pred             EEEecccccCccCc-----------ccCCC------CCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          253 HVLLDATGLVFGED-----------QLALA------LHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       253 ~vlvDAaQsv~G~~-----------pldl~------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      .+|.|||+++ |.-           .-++.      ....|.++||+|| -++.|. =|++..++
T Consensus       213 ~Vi~DaAra~-gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K-~~~~~~-GG~i~t~D  274 (460)
T PRK13237        213 KVFFDATRCV-ENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKK-DCLVNI-GGFLAMND  274 (460)
T ss_pred             EEEEECcchh-cChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCC-CCCCCC-ceEEEECC
Confidence            9999999999 822           22221      1248999999999 554353 14444443

>PLN00175 aminotransferase family protein; Provisional

Probab=98.91  E-value=3.2e-08  Score=97.72  Aligned_cols=163  Identities=12%  Similarity=0.086  Sum_probs=109.7

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.+++++    |  ++++ .+|++|+|+|+|+.+++.++ ..+||.|+...-.... ....++..|.+++.+|.+.+
T Consensus        95 ~Lr~aia~~~~~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~-~~~~~~~~g~~~~~v~~~~~  171 (413)
T PLN00175         95 ELNSAIAERFKKDTGLVVDPE-KEVTVTSGCTEAIAATILGL-INPGDEVILFAPFYDS-YEATLSMAGAKIKTVTLRPP  171 (413)
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CCEEEeCCHHHHHHHHHHHh-CCCCCEEEEeCCCchh-HHHHHHHcCCEEEEEECCcc
Confidence            4666666665    4  3443 24999999999999988877 5789998643222222 22334557999999998643


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc--cCcccCCCC---
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF--GEDQLALAL---  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~---  272 (311)
                      +..++.+.|++.+.++     ++++.++  ++-||.+++.++   |.+ |+++++++++|-+..-.  +.....+..   
T Consensus       172 ~~~~~~~~l~~~~~~~-----~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~  246 (413)
T PLN00175        172 DFAVPEDELKAAFTSK-----TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPG  246 (413)
T ss_pred             cCCCCHHHHHHhcCcC-----ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCC
Confidence            4578899999888764     4566553  335999998665   433 58899999999986531  111122211   


Q ss_pred             -CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                       .+..+++.|+=| .||.| |  +|+++..+++
T Consensus       247 ~~~~vi~i~SfSK-~~~~~-G~RiG~~v~~~~l  277 (413)
T PLN00175        247 MYERTVTMNSLGK-TFSLT-GWKIGWAIAPPHL  277 (413)
T ss_pred             CcCcEEEEecchh-hccCc-chheeeeEeCHHH
Confidence             234578889999 88745 5  7998887654

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=98.91  E-value=1.7e-08  Score=98.01  Aligned_cols=174  Identities=14%  Similarity=0.107  Sum_probs=110.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEE-ccCcChH--HHHHHHHh---------
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLT-IISEESD--YIKGFAAQ---------  190 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils-~~eh~~~--~~~~la~~---------  190 (311)
                      ......+..+.++++++.+.+  .|+||.|+|+|+..++..+ .+.+++.|+. ...+|..  ....+...         
T Consensus        77 ~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~  154 (413)
T cd00610          77 YNEPAVELAELLLALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGP  154 (413)
T ss_pred             CCHHHHHHHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence            345567899999999997544  4999999999999877754 2345677764 3344421  11111111         


Q ss_pred             CCcEEEEEeCCCC-----CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecc
Q 021539          191 KESKVIAAPETWL-----DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       191 ~G~~V~~vp~~~~-----~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDA  258 (311)
                      .+..+..+|.+..     +...+.++|++.+++..  ..+.+|.+..+  .+|.+.|    +++|.+ |+++|+++++|.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De  232 (413)
T cd00610         155 LLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP--EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADE  232 (413)
T ss_pred             CCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC--CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence            0224556665421     12236778888887521  12456665444  4699988    888865 699999999999


Q ss_pred             cccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|+..|...    .+.....+|++++|  | .+|++..+|+++.++++.+
T Consensus       233 v~~g~g~~g~~~~~~~~~~~~d~~t~s--K-~l~~g~~~g~~~~~~~~~~  279 (413)
T cd00610         233 VQTGFGRTGKMFAFEHFGVEPDIVTLG--K-GLGGGLPLGAVLGREEIMD  279 (413)
T ss_pred             cccCCCcCcchhhHhhcCCCCCeEEEc--c-cccCccccEEEEEcHHHHH
Confidence            987423221    23333468998887  9 5553445999998875544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK10534 L-threonine aldolase; Provisional

Probab=98.90  E-value=1e-08  Score=97.13  Aligned_cols=165  Identities=16%  Similarity=0.111  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhC-CcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQK-ESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~-G~~V~~vp~~~~~g  205 (311)
                      ..+.|+.+|+++|+++    +++|+|+++++.+....+ ..+|++|+.. ..|.......-+... ++++..++.+. +.
T Consensus        36 ~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  109 (333)
T PRK10534         36 VNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA-DG  109 (333)
T ss_pred             HHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCC-CC
Confidence            4589999999999853    568888888877666554 4688887633 233211100001112 35666777664 67


Q ss_pred             ccCHHHHHhhhhccCCC-CCceEEEEecccccchhcHHHHH----HHHHCCcEEEecccccCccCc---ccCCCC--CCC
Q 021539          206 RIKGSQLSQNFRRKCKY-TPKGLFSYPVVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVFGED---QLALAL--HRP  275 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~-~~t~LVs~~~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~G~~---pldl~~--l~~  275 (311)
                      .+|.++|+++++++..+ ..+++|.+....||++.|.++|.    .++++++.+++|.++.. +..   ......  ...
T Consensus       110 ~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~-~~~~~~~~~~~~~~~~~  188 (333)
T PRK10534        110 TLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWEFTRERNLALHVDGARIF-NAVVAYGCELKEITQYC  188 (333)
T ss_pred             CCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHH-HHHHHcCCCHHHHHhcC
Confidence            78999999888652100 02466666544689999998874    25788999999998765 421   111110  135


Q ss_pred             cEEEEccccCcCCCCCceEE-EEEeCCC
Q 021539          276 DLVLCTLDNNTHAQPLKITC-LLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~-L~vr~~~  302 (311)
                      |.+++|++| .||.|  +|+ ++..+++
T Consensus       189 ~~~~~s~SK-~~~~~--~G~~~~~~~~~  213 (333)
T PRK10534        189 DSFTICLSK-GLGTP--VGSLLVGNRDY  213 (333)
T ss_pred             CEEEEEeEc-CCCCc--ccceEEcCHHH
Confidence            777889999 88855  674 5444443

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=98.90  E-value=7.4e-08  Score=96.66  Aligned_cols=179  Identities=11%  Similarity=0.059  Sum_probs=113.7

Q ss_pred             cchh-HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHH
Q 021539          105 EPSR-LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDY  183 (311)
Q Consensus       105 ~~~~-l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~  183 (311)
                      ++++ +..+...-.+|-|+..-.   +-.+.+++++|.+  .  +++|+|+|.|+|++. .+..++||.|. ...|... 
T Consensus        52 Ms~~q~a~~~~GDe~yag~~s~~---~lE~~va~~~G~~--~--av~v~sGT~Al~ll~-~l~l~pGDeVp-sn~~f~T-  121 (450)
T TIGR02618        52 MSDKQWAGLMMGDEAYAGSRNFY---HLERTVRELYGFK--Y--VVPTHQGRGAENLLS-QIAIKPGDYVP-GNMYFTT-  121 (450)
T ss_pred             HHHHHHHHhhhcchhhcCCCcHH---HHHHHHHHHHCCC--e--EEEcCCHHHHHHHHH-HhCCCCcCEEC-CceeHHH-
Confidence            3344 555555545677666544   4556689999984  3  999999999999865 55568999773 2333211 


Q ss_pred             HHHHHHhCCcEEEEEeCC---------CCCcccCHHHHHhhhhccCCCCCceEEEE--eccc-ccchhcH---HHHHH-H
Q 021539          184 IKGFAAQKESKVIAAPET---------WLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVV-NGTRYSM---HWISE-A  247 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~---------~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~-tG~i~Pi---~~I~~-a  247 (311)
                      ...-....|....-++.+         ..+|.+|+++|++.++++.. ..+.++++  +++. .|...|+   ++|.+ |
T Consensus       122 t~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA  200 (450)
T TIGR02618       122 TRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIPYICLAVTVNLAGGQPVSMANMREVRELC  200 (450)
T ss_pred             HHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccCceEEEEecccCCCeeCCHHHHHHHHHHH
Confidence            111123346644444332         22578999999999986421 12345543  3333 4788664   56655 5


Q ss_pred             HHCCcEEEecccccCccCccc-----------CCC----C--CCCcEEEEccccCcCCCCCceEEEEE
Q 021539          248 HRNAWHVLLDATGLVFGEDQL-----------ALA----L--HRPDLVLCTLDNNTHAQPLKITCLLV  298 (311)
Q Consensus       248 ~~~g~~vlvDAaQsv~G~~pl-----------dl~----~--l~~Dfl~~S~HK~l~G~P~GiG~L~v  298 (311)
                      +++|+.+|.||++++ |.--+           ++.    +  ..+|.+++|+|| -++.|.  |.+++
T Consensus       201 ~~~Gl~vi~DaAR~~-gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~K-d~~~~~--GG~l~  264 (450)
T TIGR02618       201 EAHGIKVFYDATRCV-ENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKK-DCLVNI--GGFLC  264 (450)
T ss_pred             HHcCCEEEEEccchh-hChhhhhcccccccCCCHHHHHHHHhccCcEEEEeecc-CCCCCC--ceEEE
Confidence            899999999999999 75221           220    0  248999999999 776674  55555

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK09064 5-aminolevulinate synthase; Validated

Probab=98.90  E-value=3.3e-08  Score=96.64  Aligned_cols=161  Identities=12%  Similarity=0.083  Sum_probs=102.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.++++|+++|.+ +  .++|++| ++|+..++..+ .+.+++.+++..-||...+.. .+..++++..++.+  
T Consensus        90 ~~~~~~l~~~la~~~g~~-~--~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~-~~~~~~~~~~~~~~--  162 (407)
T PRK09064         90 NHYHVELERELADLHGKE-A--ALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEG-IRRSRCEKHIFRHN--  162 (407)
T ss_pred             HHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH-HHHcCCcEEEECCC--
Confidence            345678999999999952 2  3555555 55655444432 223566666554445333222 23346666555432  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cc--------cCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQ--------LALA  271 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~p--------ldl~  271 (311)
                          |.++|+++++... ...+++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|++ |. .+        .++.
T Consensus       163 ----d~~~le~~l~~~~-~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~-G~~g~~g~g~~~~~~~~  236 (407)
T PRK09064        163 ----DVAHLEELLAAAD-PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAV-GMYGPRGGGIAERDGLM  236 (407)
T ss_pred             ----CHHHHHHHHHhcc-CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcc-cccCCCCCChHHhcCCC
Confidence                4677877776311 112567776655  5899999999966 6999999999999986 53 11        1221


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                       .++|+++.|+.| .|| +.| |+++.+++.
T Consensus       237 -~~~div~~t~sK-a~g-~~G-G~~~~~~~~  263 (407)
T PRK09064        237 -DRIDIIEGTLAK-AFG-VMG-GYIAGSAAL  263 (407)
T ss_pred             -CCCeEEEEecch-hhh-ccC-ceEecCHHH
Confidence             257999999999 888 556 777766543

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=98.90  E-value=4.3e-08  Score=95.78  Aligned_cols=159  Identities=15%  Similarity=0.155  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.++++|+++|.+  .  .+|++++++|+..++..+. +.+++.|++...+|...+.. ++..|+++..++.+    
T Consensus        91 ~~~~Le~~la~~~g~~--~--~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~-~~~~g~~~~~~~~~----  161 (402)
T TIGR01821        91 PHVELEAELADLHGKE--S--ALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEG-IRHSGAEKFIFRHN----  161 (402)
T ss_pred             HHHHHHHHHHHHhCCC--e--EEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHH-HHHcCCeEEEECCC----
Confidence            4568999999999963  2  5555666888777766543 23567776543233222222 33457776655432    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-cc--------CCCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-QL--------ALALH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pl--------dl~~l  273 (311)
                        |.++++++++.. ....+++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|++ |.. +.        ++. .
T Consensus       162 --d~~~l~~~l~~~-~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~-G~~g~~g~g~~~~~~~~-~  236 (402)
T TIGR01821       162 --DVAHLEKLLQSV-DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAV-GLYGPRGGGIAERDGLM-H  236 (402)
T ss_pred             --CHHHHHHHHHhc-cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccc-cccCCCCCccchhccCC-C
Confidence              456777777631 1112567776554  5899999999966 6999999999999996 642 21        111 2


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|++..++-| .|| ..| |+++.+++.
T Consensus       237 ~~div~~t~sK-a~g-~~G-G~i~~~~~~  262 (402)
T TIGR01821       237 RIDIIEGTLAK-AFG-VVG-GYIAASRKL  262 (402)
T ss_pred             CCeEEEEechh-hhc-cCC-ceeecCHHH
Confidence            47999999999 778 335 666555443

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=98.89  E-value=5.1e-08  Score=95.85  Aligned_cols=163  Identities=10%  Similarity=0.133  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..++.++++|+++|.+ +  .++|++|.++....+ ..+ +++||+|+.....|...+.. +.-.++++.+++.+  +. 
T Consensus        44 ~~~~LE~~lA~~~g~e-~--al~~~sG~~a~~~~i-~~l-~~~GD~Vl~~~~~h~s~~~~-~~l~~~~~~~~~~~--d~-  114 (392)
T PLN03227         44 AHLELEQCMAEFLGTE-S--AILYSDGASTTSSTV-AAF-AKRGDLLVVDRGVNEALLVG-VSLSRANVRWFRHN--DM-  114 (392)
T ss_pred             HHHHHHHHHHHHhCCC-c--EEEecCcHHHHHHHH-HHh-CCCCCEEEEeccccHHHHHH-HHHcCCeEEEeCCC--CH-
Confidence            4578999999999985 3  499999988887544 344 57999987544333222322 22335677666653  11 


Q ss_pred             cCHHHHHhhhhccC------CCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------c
Q 021539          207 IKGSQLSQNFRRKC------KYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------L  268 (311)
Q Consensus       207 id~~~L~~~l~~~~------~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------l  268 (311)
                      -+.+.+.+.++.+.      ...++++|.+...  .+|.+.|+++|.+ |+++|+++++|-+|++ |..-         +
T Consensus       115 ~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~-g~~g~~G~g~~~~~  193 (392)
T PLN03227        115 KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSF-GTLGKSGRGSLEHA  193 (392)
T ss_pred             HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccc-cccCCCCCcHHHHc
Confidence            12333333333110      0013567776544  5899999999966 6999999999999996 5321         1


Q ss_pred             CCC-CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          269 ALA-LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       269 dl~-~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++. ..++|.+++|..| .+| |. .|++..+++.
T Consensus       194 g~~p~~~~Div~~slsk-~~g-~~-gg~v~~~~~~  225 (392)
T PLN03227        194 GLKPMVHAEIVTFSLEN-AFG-SV-GGMTVGSEEV  225 (392)
T ss_pred             CCCCCCCceEEEeechh-hhh-cc-CcEEecCHHH
Confidence            121 2367999999999 677 64 3455555543

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=98.89  E-value=9.5e-09  Score=98.94  Aligned_cols=161  Identities=12%  Similarity=0.056  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .+.|+.+|+++|+++++  |++|+|++|++.++.+.+ ..+| +.|+.. ..+.  .....++..|+++..+|.+. +..
T Consensus        60 ~~l~~~~a~~~g~~~~~--I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~--~y~~~~~~~G~~~~~v~~~~-~~~  133 (351)
T PRK01688         60 KAVIENYAAYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG--MYSVSAETIGVEIRTVPTLD-NWQ  133 (351)
T ss_pred             HHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHH--HHHHHHHHcCCEEEEeecCC-CCC
Confidence            37899999999998765  999999999999999987 4565 777533 2322  12344566799999999864 567


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHH-H--HCCcEEEecccccCc-cC-cccCC-CCCCCcEE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEA-H--RNAWHVLLDATGLVF-GE-DQLAL-ALHRPDLV  278 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a-~--~~g~~vlvDAaQsv~-G~-~pldl-~~l~~Dfl  278 (311)
                      +|.+++++.+. +     +++|.++  .+-||++++.+++.++ +  +.++++++|.+..-. +. ..+++ ....-=++
T Consensus       134 ~d~~~l~~~~~-~-----~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv  207 (351)
T PRK01688        134 LDLPAIADNLD-G-----VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVI  207 (351)
T ss_pred             CCHHHHHHhcc-C-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEE
Confidence            88999988773 3     3555543  3369999999887553 2  236889999986420 11 01111 11222367


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +-|+.| .|| ..|  +|+++.+++..
T Consensus       208 ~rSfSK-~~g-laGlRiGy~i~~~~~i  232 (351)
T PRK01688        208 LRTLSK-AFA-LAGLRCGFTLANEEVI  232 (351)
T ss_pred             EecchH-hhc-CHHHHHhHHhCCHHHH
Confidence            789999 998 567  59999877654

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=98.87  E-value=7.9e-08  Score=93.85  Aligned_cols=160  Identities=16%  Similarity=0.083  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHcC-----CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHCG-----LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~Lg-----a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.||++++     +++++  |++|+|+|+|+.+++..+. .+|+.|+.. ..+ .. ....++..|+++..++.+.
T Consensus        76 ~~lr~aia~~~~~~~~~~~~~~--i~~t~G~~~al~~~~~~l~-~~gd~v~i~~P~y-~~-~~~~~~~~g~~v~~~~~~~  150 (401)
T TIGR01264        76 LSAREAIASYYHNPDGPIEADD--VVLCSGCSHAIEMCIAALA-NAGQNILVPRPGF-PL-YETLAESMGIEVKLYNLLP  150 (401)
T ss_pred             HHHHHHHHHHHhhcCCCCCHHH--EEECcChHHHHHHHHHHhC-CCCCEEEEeCCCC-hh-HHHHHHHcCCEEEEeecCC
Confidence            468999999997     55554  9999999999999998873 678887633 222 12 2344566799998888753


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      . +..++.+.|++.++++     ++++.++  ++-||..++.++   |.+ |+++|+++++|-+-.-.   +.....+..
T Consensus       151 ~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  225 (401)
T TIGR01264       151 DKSWEIDLKQLESLIDEK-----TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLAS  225 (401)
T ss_pred             ccCCCCCHHHHHHHhccC-----ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHH
Confidence            2 3568999998887654     3555543  335999998554   433 58899999999986520   211222222


Q ss_pred             CCC---cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          273 HRP---DLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       273 l~~---Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +..   =+++.|+=| .||.| |  +|++++.+
T Consensus       226 ~~~~~~vi~~~SfSK-~~~~~-GlRiG~iv~~~  256 (401)
T TIGR01264       226 LSSTVPILSCGGLAK-RWLVP-GWRLGWIIIHD  256 (401)
T ss_pred             cCCCCcEEEEccCcc-cCCCc-cceEEEEEecC
Confidence            222   267889999 77744 6  89998763

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=98.87  E-value=4.5e-08  Score=95.95  Aligned_cols=158  Identities=14%  Similarity=0.104  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..+.++++|+++|.+ +  .|+|++| ++|+..++..+. ..+|+.|++. ..|.+. + ..++..|.++..++.+    
T Consensus        93 ~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~-~-~~~~~~g~~~~~~~~~----  162 (410)
T PRK13392         93 HVLLERELADLHGKE-S--ALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASM-I-EGIRRSGAEKQVFRHN----  162 (410)
T ss_pred             HHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHH-H-HHHHHcCCeEEEEeCC----
Confidence            458889999999963 3  4777766 566655555442 2367877643 344432 2 2334568888776543    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-cc--------CCCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-QL--------ALALH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pl--------dl~~l  273 (311)
                        +.+.+++.++.... ..+++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|++ |.. +-        ++. .
T Consensus       163 --d~~~l~~~l~~~~~-~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~-~  237 (410)
T PRK13392        163 --DLADLEEQLASVDP-DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAV-GLYGARGGGIAERDGLM-D  237 (410)
T ss_pred             --CHHHHHHHHHhccC-CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-cCcCCCCCchhhhccCC-C
Confidence              23455555543211 12567776544  5999999999966 6999999999999996 542 11        111 2


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++|+++.|+.| .||.| | |++..+++..
T Consensus       238 ~~div~~tlsK-~~g~~-G-G~~~~~~~~~  264 (410)
T PRK13392        238 RIDMIQGTLAK-AFGCL-G-GYIAASADLI  264 (410)
T ss_pred             CCcEEEEEChH-hhhcc-c-chhhcCHHHH
Confidence            57999999999 88854 5 6666555443

>PLN02187 rooty/superroot1

Probab=98.87  E-value=6.9e-08  Score=97.03  Aligned_cols=160  Identities=15%  Similarity=0.103  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.||++++      +++++  |++|+|+++|+.+++.++ ..+||.|+. ...+..  ....++..|.++..++.
T Consensus       110 ~~~lR~aiA~~~~~~~~~~~~~~~--I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~l  184 (462)
T PLN02187        110 ILPARRAVADYMNRDLPHKLTPED--IFLTAGCNQGIEIVFESL-ARPNANILLPRPGFPH--YDARAAYSGLEVRKFDL  184 (462)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCccc--EEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEeC
Confidence            3478999999884      56554  999999999999999988 478998863 333331  22335567999998886


Q ss_pred             CC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHH---HHH-HHHCCcEEEecccccC--c-cCcccCC
Q 021539          201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLV--F-GEDQLAL  270 (311)
Q Consensus       201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv--~-G~~pldl  270 (311)
                      .. .+..+|.++|+++++++     ++++.+  +++-||.+++.++   |.+ |+++|+++++|-+-.-  . +.....+
T Consensus       185 ~~~~~~~~d~~~l~~~~~~~-----~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~  259 (462)
T PLN02187        185 LPEKEWEIDLEGIEAIADEN-----TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM  259 (462)
T ss_pred             ccccCCccCHHHHHHhcCCC-----cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH
Confidence            32 24568899999888654     334433  3446999999554   433 5889999999998652  0 2111122


Q ss_pred             CCCC---CcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          271 ALHR---PDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       271 ~~l~---~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      ..+.   .=+++.|+=| .|+.| |  +|.++..
T Consensus       260 ~~~~~~~~vi~l~SfSK-~f~~p-GlRiG~~v~~  291 (462)
T PLN02187        260 GKFASIVPVLTLAGISK-GWVVP-GWKIGWIALN  291 (462)
T ss_pred             HHhccCCcEEEEecchh-hcCCc-cceeEEEEec
Confidence            2221   2366779999 77755 5  8988873

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=98.86  E-value=9.3e-08  Score=95.06  Aligned_cols=160  Identities=15%  Similarity=0.063  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.+.|+.||++++.      +++  +|++|+|+|+|+++++..+ ..+||+|+.. ..+..  ....+...|.++..++.
T Consensus        96 ~~~lr~aia~~~~~~~~~~~~~~--~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~~  170 (430)
T PLN00145         96 LLPARRAIAEYLSRDLPYELSTD--DIYLTAGCAQAIEIIMSVL-AQPGANILLPRPGYPL--YEARAVFSGLEVRHFDL  170 (430)
T ss_pred             CHHHHHHHHHHHhhccCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--HHHHHHHcCCEEEEeeC
Confidence            34789999999853      444  5999999999999999988 4789998633 23221  12234446889988875


Q ss_pred             CC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHH---HHHH-HHHCCcEEEecccccCc--cC-cccCC
Q 021539          201 TW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF--GE-DQLAL  270 (311)
Q Consensus       201 ~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~--G~-~pldl  270 (311)
                      .. .+..+|.++|+++++++     ++++.+  +.+-||.++|.+   +|.+ |+++|+++++|.+-.-.  +. ..+.+
T Consensus       171 ~~~~~~~~d~~~l~~~~~~~-----~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~  245 (430)
T PLN00145        171 LPERGWEVDLEGVEALADEN-----TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM  245 (430)
T ss_pred             CcccCCcCCHHHHHHHhCcC-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch
Confidence            32 24568999999888765     344433  333699999954   5544 68899999999985420  11 11222


Q ss_pred             CC---CCCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          271 AL---HRPDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       271 ~~---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      ..   ...=+++.|+=| .|+.| |  +|.+++.
T Consensus       246 ~~~~~~~~vi~~~S~SK-~~~~p-G~RlG~iv~~  277 (430)
T PLN00145        246 GVFGEVAPVLTLGSISK-RWVVP-GWRLGWIATC  277 (430)
T ss_pred             hhhcccCcEEEEecccc-ccCCC-CeeEEEEEEe
Confidence            21   223477889999 76645 5  8998873

>PLN02656 tyrosine transaminase

Probab=98.86  E-value=8.4e-08  Score=94.36  Aligned_cols=160  Identities=16%  Similarity=0.038  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.++++++      ++++  +|++|+|+|+|+++++..+ ..+||.|+ ....+..  ....++..|+++..+|.+
T Consensus        76 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~i~~~  150 (409)
T PLN02656         76 PQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPRPGFPI--YELCAAFRHLEVRYVDLL  150 (409)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeCCCCCc--HHHHHHHcCCEEEEEeCC
Confidence            368888888874      4444  5999999999999999887 47899886 3334431  122334469999999985


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      .. +..++.+.+++.++++     ++++.+.  ++-||.+++.+   +|.+ |+++|+++++|.+-.-.   +.....+.
T Consensus       151 ~~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~  225 (409)
T PLN02656        151 PEKGWEVDLDAVEALADQN-----TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMG  225 (409)
T ss_pred             CcCCCCCCHHHHHHHhccC-----ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHH
Confidence            32 3468899998888654     3444443  33699998654   4433 58899999999986520   11112221


Q ss_pred             ---CCCCcEEEEccccCcCCCC-CceEEEEEe
Q 021539          272 ---LHRPDLVLCTLDNNTHAQP-LKITCLLVR  299 (311)
Q Consensus       272 ---~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr  299 (311)
                         ....=+++.|+=| .|+.| -.+|+++..
T Consensus       226 ~~~~~~~vi~~~SfSK-~f~~pGlRiG~~i~~  256 (409)
T PLN02656        226 VFGSIVPVLTLGSLSK-RWIVPGWRLGWFVTT  256 (409)
T ss_pred             HhcccCcEEEEcccch-hccCcceeEEEEEEe
Confidence               1122367889999 76645 138999874

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=98.86  E-value=6.9e-08  Score=94.66  Aligned_cols=157  Identities=15%  Similarity=0.141  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ..++.++++|+++|.+   ..++|++|+ +|+..++..+.. .+|+.|++. .+|.+ .+.. .+..|.++..++.+   
T Consensus        91 ~~~~le~~la~~~g~~---~~~~~~SG~-~An~~ai~~l~~~~~g~~I~~~~~~H~s-~~~~-~~~~g~~~~~~~~~---  161 (406)
T PRK13393         91 YHVLLEAELADLHGKE---AALLFTSGY-VSNWAALSTLGSRLPGCVILSDELNHAS-MIEG-IRHSRAEKRIFRHN---  161 (406)
T ss_pred             HHHHHHHHHHHHhCCC---cEEEeCCcH-HHHHHHHHHhhcCCCCCEEEEccchhHH-HHHH-HHHcCCeEEEeCCC---
Confidence            4568899999999973   236666665 577666665432 256777654 44432 2222 23357777776643   


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-ccc--------CCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQL--------ALAL  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pl--------dl~~  272 (311)
                         +.+.+++.++... ...+++|++.++  .+|.++|+++|.+ |+++|+++++|.+|++ |. .+.        ++. 
T Consensus       162 ---d~~~l~~~l~~~~-~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~G~g~~~~~~~~-  235 (406)
T PRK13393        162 ---DPADLERKLSDLD-PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAV-GLYGPRGGGIAEREGLA-  235 (406)
T ss_pred             ---CHHHHHHHHHhcc-CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchhhhcCCC-
Confidence               4566666665311 112578877655  5899999999966 6999999999999996 65 221        111 


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      .++|+++.++=| .||.+ | |++..+++
T Consensus       236 ~~~~i~~~tlsK-a~g~~-G-G~~~~~~~  261 (406)
T PRK13393        236 DRLTIIEGTLAK-AFGVM-G-GYITGSAA  261 (406)
T ss_pred             CCCeEEEEeCch-hhccc-C-ceeeCCHH
Confidence            236888889999 88843 5 66654433

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=98.85  E-value=1.1e-07  Score=93.58  Aligned_cols=159  Identities=12%  Similarity=0.076  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHcC------------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEE
Q 021539          129 IQARNRALKHCG------------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       129 e~aR~~IA~~Lg------------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V  195 (311)
                      .+.|+.||++++            ++++  +|++|+|+++++.+++..+ ..+||.|+. ...+..  ....++..|+++
T Consensus        78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~g~~~  152 (412)
T PTZ00433         78 PEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPH--YETVCKAYGIEM  152 (412)
T ss_pred             HHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCccc--HHHHHHHcCCEE
Confidence            368899999886            4444  4999999999999999987 468898863 333321  233456679999


Q ss_pred             EEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCc
Q 021539          196 IAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GED  266 (311)
Q Consensus       196 ~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~  266 (311)
                      ..+|.+.. +..++.++|++.++++     +++|.++  ++-||..++.+++   .+ |+++|+++++|-+..-.  +..
T Consensus       153 ~~i~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~  227 (412)
T PTZ00433        153 RFYNCRPEKDWEADLDEIRRLVDDR-----TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA  227 (412)
T ss_pred             EEEecCccccCcCCHHHHHHHhccC-----ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC
Confidence            99987532 3468899998888754     3555553  2359998886554   33 58899999999986520  111


Q ss_pred             c-cCCCCC---CCcEEEEccccCcCCCC-CceEEEEE
Q 021539          267 Q-LALALH---RPDLVLCTLDNNTHAQP-LKITCLLV  298 (311)
Q Consensus       267 p-ldl~~l---~~Dfl~~S~HK~l~G~P-~GiG~L~v  298 (311)
                      + ..+..+   ..-+++.|+=| .||.| -.+|++++
T Consensus       228 ~~~~~~~~~~~~~~i~~~SfSK-~~~~pGlRlG~~i~  263 (412)
T PTZ00433        228 TFTSVADFDTTVPRVILGGTAK-NLVVPGWRLGWLLL  263 (412)
T ss_pred             CccchhhccCCCceEEEccchh-hcCCCCeeEEEEEE
Confidence            1 111111   12267789999 88645 24898886

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=98.83  E-value=3.3e-08  Score=95.63  Aligned_cols=159  Identities=16%  Similarity=0.153  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH-----HHHHHHHhCCcEEEEEeCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD-----YIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~-----~~~~la~~~G~~V~~vp~~~  202 (311)
                      ..++.+++++++|.  ..  +.|++++|.|+.+.+.+.. ++|..|++..+.|..     ....+  ..+.++..++-  
T Consensus        37 ~~~~e~~~ae~~g~--~a--~~Fv~sGT~aN~lal~~~~-~~~~~vi~~~~aHi~~~E~Ga~~~~--~~~~~~~~~~g--  107 (342)
T COG2008          37 TNALEQRIAELFGK--EA--ALFVPSGTQANQLALAAHC-QPGESVICHETAHIYTDECGAPEFF--GGGQKLPIVPG--  107 (342)
T ss_pred             HHHHHHHHHHHhCC--ce--EEEecCccHHHHHHHHHhc-CCCCeEEEeccccceecccCcHHHH--cCCceeccCCC--
Confidence            45788899999998  33  9999999999999888775 677777655444422     12221  11333333332  


Q ss_pred             CCcccCHHHHHhhhhccC-CCCCceEEEE-e-cccccchhcHHHHH---H-HHHCCcEEEecccccCccC--cccCCCC-
Q 021539          203 LDLRIKGSQLSQNFRRKC-KYTPKGLFSY-P-VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGE--DQLALAL-  272 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~-~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~--~pldl~~-  272 (311)
                      ++|.+++++++..+++.. -+.++.++++ + +.+.|+++|+++|.   + ||++|..+|+|++=.+-..  ..+++.. 
T Consensus       108 ~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~  187 (342)
T COG2008         108 ADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTI  187 (342)
T ss_pred             CCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHH
Confidence            379999999999887532 2334566654 3 22669999999873   3 5899999999998653111  1133332 


Q ss_pred             -CCCcEEEEccccCcCCCCCceEEEEE
Q 021539          273 -HRPDLVLCTLDNNTHAQPLKITCLLV  298 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~GiG~L~v  298 (311)
                       ..+|.++|++-| -.|.|  +|.+++
T Consensus       188 ~~~~D~v~~~~tK-~g~~~--~gAiv~  211 (342)
T COG2008         188 KSYVDSVSFCLTK-GGGAP--VGAIVF  211 (342)
T ss_pred             HhhCCEEEEeccc-CCcce--eeeEEE
Confidence             369999999999 55545  444443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=98.77  E-value=2.2e-07  Score=91.43  Aligned_cols=160  Identities=16%  Similarity=0.095  Sum_probs=106.0

Q ss_pred             HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++      +++++  +|++|+|+++++.+++..+. .+||.|+. .-.+..  ....++..|.++..++.+.
T Consensus        78 ~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l~-~~gd~v~v~~P~y~~--~~~~~~~~g~~~~~~~~~~  152 (409)
T PLN00143         78 PARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVLA-RPEANILLPRPGFPD--VETYAIFHHLEIRHFDLLP  152 (409)
T ss_pred             HHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHHc-CCCCEEEEcCCCCcC--HHHHHHHcCCEEEEEeccC
Confidence            6888899887      35554  49999999999999999873 68898753 222221  2233455689998888742


Q ss_pred             -CCcccCHHHHHhhhhccCCCCCceEE-EEecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcc-cCCCCC
Q 021539          203 -LDLRIKGSQLSQNFRRKCKYTPKGLF-SYPVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQ-LALALH  273 (311)
Q Consensus       203 -~~g~id~~~L~~~l~~~~~~~~t~LV-s~~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~p-ldl~~l  273 (311)
                       .+..++.++|++++++++    ..++ +.+++=||.+++.+++   .+ |+++++++++|-+-.-.  ...+ ..+..+
T Consensus       153 ~~~~~~d~~~l~~~~~~~~----~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~  228 (409)
T PLN00143        153 EKGWEVDLDAVEAIADENT----IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF  228 (409)
T ss_pred             CCCCcCCHHHHHHhcccCC----EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhh
Confidence             233579999988876542    2233 3344469999997655   33 58899999999986520  1111 122212


Q ss_pred             C---CcEEEEccccCcCCCCC-ceEEEEEe
Q 021539          274 R---PDLVLCTLDNNTHAQPL-KITCLLVR  299 (311)
Q Consensus       274 ~---~Dfl~~S~HK~l~G~P~-GiG~L~vr  299 (311)
                      .   .=+++.|+=| .||.|- .+|+++..
T Consensus       229 ~~~~~vi~~~SfSK-~f~~pGlRvG~~v~~  257 (409)
T PLN00143        229 ASIVPVITLGSISK-RWMIPGWGLGWLVTC  257 (409)
T ss_pred             cccCcEEEEccchh-hcCCCccceEEEEee
Confidence            1   2278889999 877452 38999883

>PRK06348 aspartate aminotransferase; Provisional

Probab=98.77  E-value=1.4e-07  Score=91.77  Aligned_cols=161  Identities=12%  Similarity=0.048  Sum_probs=106.3

Q ss_pred             HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++      +++++  +|++|+|+++|+.+++.++ ..+|+.|+.. ..+. . ....++..|.++..+|...
T Consensus        70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~-~-~~~~~~~~g~~~~~~~~~~  144 (384)
T PRK06348         70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHEPYFT-P-YKDQIEMVGGKPIILETYE  144 (384)
T ss_pred             HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCCc-c-hHHHHHHcCCEEEEecCCc
Confidence            5777777777      35554  4999999999999999988 4688988632 2222 1 2233445688888887632


Q ss_pred             -CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccCCCC-
Q 021539          203 -LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLALAL-  272 (311)
Q Consensus       203 -~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pldl~~-  272 (311)
                       .+..++.++|++.++++     +++|.++  ++-||.+++.+++   .+ |+++++++++|-+-.-.  +.....+.. 
T Consensus       145 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  219 (384)
T PRK06348        145 EDGFQINVKKLEALITSK-----TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATL  219 (384)
T ss_pred             CcCCcCCHHHHHHhhCcC-----ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhc
Confidence             23357899999888654     3444433  3359999986654   33 58899999999986520  111122211 


Q ss_pred             ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                         .+-.+++-|+=| .||.| |  +|+++..+++
T Consensus       220 ~~~~~~vi~~~SfSK-~~~l~-GlRiG~~v~~~~~  252 (384)
T PRK06348        220 AGMPERTITFGSFSK-DFAMT-GWRIGYVIAPDYI  252 (384)
T ss_pred             CCCcCcEEEEecchh-ccCCc-cccceeeecCHHH
Confidence               123477789999 87744 5  7998886544

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=98.77  E-value=5.4e-08  Score=93.83  Aligned_cols=163  Identities=14%  Similarity=0.100  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ...|+.||+++      +++++  +|++|+|+++++.++++.+. .+|+.|+.. -.+.  .....++..|.++..+|.+
T Consensus        68 ~~lr~aia~~~~~~~~~~~~~~--~I~it~G~~~~l~~~~~~~~-~~gd~v~v~~P~y~--~~~~~~~~~g~~~~~~~~~  142 (368)
T PRK03317         68 VALRADLAAYLTAQTGVGLTVE--NVWAANGSNEILQQLLQAFG-GPGRTALGFVPSYS--MHPIIARGTHTEWVEGPRA  142 (368)
T ss_pred             HHHHHHHHHHhhhhccCCCChh--hEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCChH--HHHHHHHhcCCeeEEcccC
Confidence            47899999998      45655  49999999999999999873 688887632 2221  1223345568888777765


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCC
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHR  274 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~  274 (311)
                      . +..++.+.+++.++..    +++++.++  ++-||..+|.+++.+ ++..++++++|-++.-.+...    +.+....
T Consensus       143 ~-~~~~d~~~l~~~~~~~----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~  217 (368)
T PRK03317        143 A-DFTLDVDAAVAAIAEH----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEY  217 (368)
T ss_pred             C-CCCCCHHHHHHHHhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhC
Confidence            3 4467999999888642    13444433  225999999999976 466789999999987422111    1111112


Q ss_pred             Cc-EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          275 PD-LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       275 ~D-fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .+ +++.|+-| .||.| |  +|+++.++++.
T Consensus       218 ~~~i~~~SfSK-~~g~~-GlRiG~~~~~~~~~  247 (368)
T PRK03317        218 PRLVVSRTMSK-AFAFA-GGRLGYLAAAPAVV  247 (368)
T ss_pred             CCEEEEEechh-hhccc-hhhhhhhhCCHHHH
Confidence            34 45569999 88744 6  68888766543

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=98.77  E-value=2.6e-07  Score=89.12  Aligned_cols=158  Identities=13%  Similarity=0.112  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC-c
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD-L  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~-g  205 (311)
                      ..+.|+.+|+++++++++  |++|+|+++++++++..+  .++ .|+ ..-.+. . ....++..|.++..+|.+.++ .
T Consensus        56 ~~~lr~~ia~~~~~~~~~--i~it~Ga~~~l~~~~~~~--~~~-~v~i~~P~y~-~-~~~~~~~~g~~~~~~~~~~~~~~  128 (354)
T PRK06358         56 YLELRKRIASFEQLDLEN--VILGNGATELIFNIVKVT--KPK-KVLILAPTFA-E-YERALKAFDAEIEYAELTEETNF  128 (354)
T ss_pred             HHHHHHHHHHHhCCChhh--EEECCCHHHHHHHHHHHh--CCC-cEEEecCChH-H-HHHHHHHcCCeeEEEeCccccCC
Confidence            358999999999998765  999999999999999886  233 443 222211 1 233455679999999986432 2


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccC----CCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLA----LALH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pld----l~~l  273 (311)
                      .+| +++.+.+.++     ++++.+  +++-||..++.+++   .+ |+++++++++|.+-.-.  ...+..    +...
T Consensus       129 ~~d-~~~~~~~~~~-----~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~  202 (354)
T PRK06358        129 AAN-EIVLEEIKEE-----IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENF  202 (354)
T ss_pred             Ccc-HHHHHhhccC-----CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCC
Confidence            466 4554555433     344433  44469999986554   33 57899999999985310  111111    1111


Q ss_pred             CCcEEEEccccCcCCCC-CceEEEEEe
Q 021539          274 RPDLVLCTLDNNTHAQP-LKITCLLVR  299 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P-~GiG~L~vr  299 (311)
                      +-=+++.|+=| .||.| -.+|+++..
T Consensus       203 ~~vi~~~S~SK-~~gl~G~RiG~lv~~  228 (354)
T PRK06358        203 KNLIIIRAFTK-FFAIPGLRLGYGLTS  228 (354)
T ss_pred             CCEEEEEechh-hccCcchhheeeecC
Confidence            11277889999 88744 138888774

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=98.75  E-value=1.7e-07  Score=90.84  Aligned_cols=162  Identities=13%  Similarity=0.089  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..+.|+.||+++++++++  |++|+|+++++.++...+ ..+||.|+... .+. ... ..++..|.++..+|.+. + .
T Consensus        69 ~~~Lr~~ia~~~~~~~~~--I~it~G~~~~l~~~~~~~-~~~gd~vlv~~p~y~-~~~-~~~~~~g~~~~~vp~~~-~-~  141 (369)
T PRK08153         69 NHDLRHALAAHHGVAPEN--IMVGEGIDGLLGLIVRLY-VEPGDPVVTSLGAYP-TFN-YHVAGFGGRLVTVPYRD-D-R  141 (369)
T ss_pred             cHHHHHHHHHHhCCCHHH--EEEcCCHHHHHHHHHHHh-cCCCCEEEECCCcch-HHH-HHHHHcCCeEEEeeCCC-C-C
Confidence            458999999999998764  999999999999998876 36899887432 222 111 22344688999999864 4 3


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HH--HCCcEEEecccccCccCc--ccCCCCCC-CcEE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AH--RNAWHVLLDATGLVFGED--QLALALHR-PDLV  278 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~G~~--pldl~~l~-~Dfl  278 (311)
                      ++.+.+.+.+...    +++++.+  +++-||+++|.+++.+ ++  ++++++++|-+-.-.+..  ...+.... --++
T Consensus       142 ~~~~~l~~~~~~~----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~  217 (369)
T PRK08153        142 EDLDALLDAARRE----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIR  217 (369)
T ss_pred             CCHHHHHHHhccc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEE
Confidence            6788776655422    1345544  3335899999988754 32  348999999986531211  11222212 2377


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +.|+=| .||.| |  +|+++..++.
T Consensus       218 ~~SfSK-~~g~~-GlRiG~~v~~~~~  241 (369)
T PRK08153        218 MRTFSK-AYGLA-GARVGYAIGAPGT  241 (369)
T ss_pred             EecchH-hccCc-chheeeeecCHHH
Confidence            889999 88845 6  6999886654

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=98.75  E-value=1.9e-07  Score=90.98  Aligned_cols=163  Identities=15%  Similarity=0.046  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHc--------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE--EEEcc-CcChHHHHHHHHhCCcEEEE
Q 021539          129 IQARNRALKHC--------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY--YLTII-SEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       129 e~aR~~IA~~L--------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~--Ils~~-eh~~~~~~~la~~~G~~V~~  197 (311)
                      .+.|+.||+++        |++++ .+|++|+|+++++.+++..+ ..+|+.  |+... .+.  .....++..|.++..
T Consensus        67 ~~lr~aia~~~~~~~~~~~~~~~~-~~i~it~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~--~~~~~~~~~g~~~~~  142 (393)
T TIGR03538        67 PELRQAIARWLERRFDLPTGVDPE-RHVLPVNGTREALFAFAQAV-INPGQAPLVVMPNPFYQ--IYEGAALLAGAEPYF  142 (393)
T ss_pred             HHHHHHHHHHHHHhhCCcccCCCC-ceEEECCCcHHHHHHHHHHH-cCCCCcceEEecCCCCc--chHHHHHhcCCeEEE
Confidence            36888888888        34543 25999999999999999887 367875  54321 111  123345567999999


Q ss_pred             EeCCCCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccC----c
Q 021539          198 APETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGE----D  266 (311)
Q Consensus       198 vp~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~----~  266 (311)
                      +|.+..+ ..++.+.+++.+.++     ++++.++  ++=||.+++.+++   .+ |+++++++++|-+-.-.-.    .
T Consensus       143 v~~~~~~~~~~d~~~l~~~~~~~-----~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~  217 (393)
T TIGR03538       143 LNCTAENGFLPDFDAVPESVWRR-----CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNP  217 (393)
T ss_pred             eeccccCCCCCCHHHHHHHHhhc-----ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCC
Confidence            9986422 356888888877654     3455443  3359999996554   33 5789999999998653110    1


Q ss_pred             ccCC----CCCCC-----cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          267 QLAL----ALHRP-----DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       267 pldl----~~l~~-----Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +..+    ...+.     =+++.|+=| .||.| |  +|+++..+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~vi~i~S~SK-~~~~~-GlRvG~~i~~~~l  262 (393)
T TIGR03538       218 PAGLLQAAAQLGRDDFRRCLVFHSLSK-RSNLP-GLRSGFVAGDAEI  262 (393)
T ss_pred             CcCHHHhcccccccccccEEEEecchh-hcCCc-ccceEEEecCHHH
Confidence            1111    11111     278899999 77644 5  8888876544

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.73  E-value=5.7e-08  Score=94.31  Aligned_cols=171  Identities=18%  Similarity=0.175  Sum_probs=112.3

Q ss_pred             CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCC-EEE-EccCcChHHHHHHHHhCCc
Q 021539          117 TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGN-YYL-TIISEESDYIKGFAAQKES  193 (311)
Q Consensus       117 ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd-~Il-s~~eh~~~~~~~la~~~G~  193 (311)
                      .|+++......+++|++.+.++|+++ ++|.|+|.+ |+|..+.++..++.-.++. ++. ...+..+  .. -+++.+-
T Consensus        41 ~SHRsk~~~~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a--~~-eA~~~~~  116 (365)
T COG1932          41 ISHRSKEFKNVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFA--IK-EAKKVGK  116 (365)
T ss_pred             eccccHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhH--HH-HHHHhcc
Confidence            46677778888899999999999996 789999996 8888888888877433332 343 2333221  11 1333332


Q ss_pred             --EEEEEe-CCCCCccc-CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcc
Q 021539          194 --KVIAAP-ETWLDLRI-KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQ  267 (311)
Q Consensus       194 --~V~~vp-~~~~~g~i-d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~p  267 (311)
                        .+..+. ...+.+.+ +.+...  +.++     ...|.++++  .+|+..|  +.... ..+.++++|++..+ ...+
T Consensus       117 ~~~~~~~~~~~~~~~~iP~~~~~~--~~~~-----~ayv~~~~NeTi~Gv~v~--~~p~~-~~~~~~v~D~SS~i-lsr~  185 (365)
T COG1932         117 QPKLIDARIEEAGYGSIPDLSKWD--FSDN-----DAYVHFCWNETISGVEVP--ELPDI-GSDGLLVADASSAI-LSRP  185 (365)
T ss_pred             cccccccceeccCccCCCChhhcc--cCCC-----ccEEEEecCCcccceEcc--CCCCC-CCCceEEEecccHH-hcCC
Confidence              221111 11112222 111111  2221     345777777  4798777  11111 11288999999999 9999


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      +|++  +.|.+.++.+| -+| |.|++++++|+++++..
T Consensus       186 iDvs--k~dviyagaQK-nlG-paGltvvIvr~~~l~r~  220 (365)
T COG1932         186 IDVS--KYDVIYAGAQK-NLG-PAGLTVVIVRPDLLERA  220 (365)
T ss_pred             CChh--HcceEEEehhh-ccC-ccceEEEEEcHHHHhcc
Confidence            9997  46999999999 999 99999999999988764

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.72  E-value=3.8e-08  Score=94.13  Aligned_cols=173  Identities=16%  Similarity=0.066  Sum_probs=122.7

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC---CEEEEccC-cChH--HHHHHHHhCCcEE----EEEe
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG---NYYLTIIS-EESD--YIKGFAAQKESKV----IAAP  199 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G---d~Ils~~e-h~~~--~~~~la~~~G~~V----~~vp  199 (311)
                      -.-..++...|+...|  |....+-|--++.+.-+| +++.   -.|+.... .+++  ++..-++-+|..+    +.+.
T Consensus       115 ~il~l~~~iVGA~e~E--vavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ie  191 (465)
T KOG3846|consen  115 PILPLLAPIVGAQENE--VAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIE  191 (465)
T ss_pred             hhhhhhhhhccCCchh--hhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEec
Confidence            4566788899997655  888889998899888887 2322   22431111 1111  2322234456543    2233


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHH-HHCCcEEEecccccCccCcccCCCCCCCc
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      ..+....+..+++-+.+..+.  ....+|+++.+  -||+..+|..|..| +..|++|=.|-||++ |..|+-+..+++|
T Consensus       192 PREGEetlRteDILd~IEkng--DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAv-gNVpL~LHdWgVD  268 (465)
T KOG3846|consen  192 PREGEETLRTEDILDTIEKNG--DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAV-GNVPLQLHDWGVD  268 (465)
T ss_pred             ccccccchhHHHHHHHHHhcC--CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhh-cCCceEEeecCCc
Confidence            222122345567777776542  24689999877  59999999999988 668999999999999 9999999999999


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      |.|-..+|++..+|-|+|.|+|..+....+.|
T Consensus       269 FACWCSYKYlnaGaGgIgGlFvHekh~~~~~p  300 (465)
T KOG3846|consen  269 FACWCSYKYLNAGAGGIGGLFVHEKHTKESLP  300 (465)
T ss_pred             eEEEeeecccccCCCccceeeeehhhhcchhh
Confidence            99999999777669999999999887655444

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=98.72  E-value=2.6e-07  Score=88.11  Aligned_cols=168  Identities=13%  Similarity=0.058  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .++.|+.+|++++      .+++ ..|++|+|+.+++..+...+...+|+.|+.. ..|. . ....++..|.++..+|.
T Consensus        46 ~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~-~-~~~~~~~~g~~~~~~~~  122 (363)
T PF00155_consen   46 YPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYP-S-YIEAARLLGAEVIPVPL  122 (363)
T ss_dssp             HHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSST-H-HHHHHHHTTSEEEEEEE
T ss_pred             hHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCCccc-c-ccccccccCceeeeccc
Confidence            4589999999999      6554 2499999999999887776633578887633 2333 2 33445667999988885


Q ss_pred             CC-CCcccCHHHHHhhhhccCCCC-CceEEEEec--ccccchhcHHHHHH----HHHCCcEEEecccccCccCcc-----
Q 021539          201 TW-LDLRIKGSQLSQNFRRKCKYT-PKGLFSYPV--VVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQ-----  267 (311)
Q Consensus       201 ~~-~~g~id~~~L~~~l~~~~~~~-~t~LVs~~~--~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~p-----  267 (311)
                      +. .+..++.++|++.+++...+. ++.++.++.  +-||..+|.+++.+    ++++|+++++|-++.. ....     
T Consensus       123 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~  201 (363)
T PF00155_consen  123 DSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD-LIFGDPDFG  201 (363)
T ss_dssp             EETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT-GBSSSSHTH
T ss_pred             cccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec-cccCCCccC
Confidence            31 256789999999998631111 135555542  25999999887633    5789999999999986 3222     


Q ss_pred             ---cCCCCCCC-cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          268 ---LALALHRP-DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       268 ---ldl~~l~~-Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                         ..+.. .. -+++.|+-| .||.| |  +|++++.++.
T Consensus       202 ~~~~~~~~-~~~vi~~~S~SK-~~g~~-GlRvG~i~~~~~~  239 (363)
T PF00155_consen  202 PIRSLLDE-DDNVIVVGSLSK-SFGLP-GLRVGYIVAPPEL  239 (363)
T ss_dssp             HHHGHHTT-TSTEEEEEESTT-TTTSG-GGTEEEEEEEHHH
T ss_pred             cccccccc-cccceeeeeccc-ccccc-ccccccccchhhh
Confidence               22222 33 499999999 88855 6  8999986543

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07049 methionine gamma-lyase; Validated

Probab=98.71  E-value=4.7e-07  Score=90.35  Aligned_cols=160  Identities=11%  Similarity=0.011  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC--hHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE--SDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~--~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ....++.||++.|.+  +  +++|+|+++|+.+++.++ .++||+|+... .+.  ...+...++..|+++..++..   
T Consensus        85 ~~~Le~~lA~leg~~--~--~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~---  156 (427)
T PRK07049         85 SEIVEDRLAVYEGAE--S--AALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG---  156 (427)
T ss_pred             HHHHHHHHHHHhCCC--c--EEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC---
Confidence            457888999999963  3  777888888999888876 46899986432 222  112233345668886555521   


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHH------CCcEEEecccccC-ccCcccCCCCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHR------NAWHVLLDATGLV-FGEDQLALALHR  274 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~------~g~~vlvDAaQsv-~G~~pldl~~l~  274 (311)
                        .+.+++++.+.+.....++++|.+.  .+-+|.++|+++|.+ ++.      +++.+++|-+=+- ....|+   .++
T Consensus       157 --~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl---~~g  231 (427)
T PRK07049        157 --LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL---EHG  231 (427)
T ss_pred             --CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc---ccC
Confidence              3566777766532111125565543  225999999999966 455      7899999998221 022233   357


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      +|+++.|+-| .+|+..|  +|+++.+++
T Consensus       232 ~divv~S~SK-~~gG~~glr~G~vv~~~~  259 (427)
T PRK07049        232 ADLSVYSLTK-YVGGHSDLVAGAVLGRKA  259 (427)
T ss_pred             CCEEEEcCce-eecCCCCcEEEEEECCHH
Confidence            8999999999 6663333  676665544

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=98.70  E-value=3.1e-07  Score=88.98  Aligned_cols=164  Identities=16%  Similarity=0.096  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-CCc-
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTIISEESDYIKGFAAQKESKVIAAPETW-LDL-  205 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~-~~g-  205 (311)
                      .+.|+.||+++|+++++  |++|+|+++++++++..+. .+| +.|+...-... .....++..|.++..+|.+. .++ 
T Consensus        62 ~~lr~~ia~~~~~~~~~--I~~t~G~~~~l~~~~~~~~-~~g~~~vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~  137 (364)
T PRK04781         62 PGLRSALAALYGCAPEQ--LLIGRGSDEAIDLLVRALC-VPGRDAVLVTPPVFG-MYAVCARLQNAPLVEVPLVDGADGF  137 (364)
T ss_pred             HHHHHHHHHHhCcChHH--EEEeCCHHHHHHHHHHHhc-CCCCCeEEEcCCChH-HHHHHHHHcCCEEEEEecCCCccCC
Confidence            47999999999998764  9999999999999998873 566 66653221112 22334556799999999742 123 


Q ss_pred             ccCHHHHHhhh-hccCCCCCceEEEEec--ccccchhcHHHHHH-HH--HCCcEEEecccccCc-cC-cccCC-CCCCCc
Q 021539          206 RIKGSQLSQNF-RRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AH--RNAWHVLLDATGLVF-GE-DQLAL-ALHRPD  276 (311)
Q Consensus       206 ~id~~~L~~~l-~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~-G~-~pldl-~~l~~D  276 (311)
                      .++.+++.+.+ ..+     +++|.++.  +-||.++|.+++.+ ++  +.++++++|.+-.-. .. ..+.+ ...+-=
T Consensus       138 ~~d~~~l~~~~~~~~-----~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~v  212 (364)
T PRK04781        138 HADVPAIVAAALASN-----AKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNL  212 (364)
T ss_pred             CcCHHHHHHHHhccC-----CeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCE
Confidence            46777765444 332     46666542  25999999998855 33  247899999985420 11 11111 112223


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +++-|+=| .||.| |  +|.++..+++.
T Consensus       213 i~~~SfSK-~~gl~-GlRvGy~v~~~~l~  239 (364)
T PRK04781        213 AVLRTLSK-AHALA-AARIGSLIANAELI  239 (364)
T ss_pred             EEEecChh-hcccc-cceeeeeeCCHHHH
Confidence            77889999 88844 5  79998876554

>PRK09148 aminotransferase; Validated

Probab=98.70  E-value=2e-07  Score=91.62  Aligned_cols=164  Identities=10%  Similarity=-0.009  Sum_probs=104.3

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+|+++    |  ++++ .+|++|+|+++++.+++..+ ..+||.|+.. ..+..  ....++..|.++..+|.+.
T Consensus        72 ~lr~aia~~~~~~~g~~~~~~-~~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~v~~v~~~~  147 (405)
T PRK09148         72 GLRRAQAAYYARRFGVKLNPD-TQVVATLGSKEGFANMAQAI-TAPGDVILCPNPSYPI--HAFGFIMAGGVIRSVPAEP  147 (405)
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CcEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc--cHHHHHhcCCEEEEEeCCC
Confidence            6888888877    4  4444 14999999999999999988 4689988632 23321  1222345699999999864


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCccc-CCCC-
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQL-ALAL-  272 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pl-dl~~-  272 (311)
                      + +. ..+++++.++....  +++++.+.  ++=||..+|.+++   .+ |+++|+++++|-+..-.  +..+. .+.. 
T Consensus       148 ~-~~-~~~~l~~~~~~~~~--~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~  223 (405)
T PRK09148        148 D-EE-FFPALERAVRHSIP--KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQV  223 (405)
T ss_pred             C-CC-CccCHHHHHhhccc--cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhC
Confidence            2 22 23445555542111  13455443  4469999998654   33 58899999999987520  11111 1211 


Q ss_pred             ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                         .+..+++.|+-| .||.| |  +|+++..+++.
T Consensus       224 ~~~~~~~i~~~SfSK-~~~~p-GlR~G~~v~~~~~i  257 (405)
T PRK09148        224 PGAKDVTVEFTSMSK-TFSMA-GWRMGFAVGNERLI  257 (405)
T ss_pred             CCccCcEEEEecccc-ccCCc-chheeeeeCCHHHH
Confidence               123466899999 88844 7  99998766543

>PRK06107 aspartate aminotransferase; Provisional

Probab=98.70  E-value=3.6e-07  Score=89.45  Aligned_cols=165  Identities=13%  Similarity=0.024  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC-Ccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL-DLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~-~g~  206 (311)
                      +...+.+++.+|..-+..+|++|+|+|+|+++++.++ +.+||.|+.. ..+.. .. ......+.++..++.+.+ +..
T Consensus        77 ~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~-y~-~~~~~~~~~~~~v~~~~~~~~~  153 (402)
T PRK06107         77 KAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMAT-LEAGDEVIIPAPYWVS-YP-DMVLANDGTPVIVACPEEQGFK  153 (402)
T ss_pred             HHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCCCcC-HH-HHHHHcCCEEEEecCCcccCCC
Confidence            3444455556676322235999999999999998876 5789988633 22221 11 112234666666776432 345


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHC-CcEEEecccccCc---cCcccCCCCC---
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRN-AWHVLLDATGLVF---GEDQLALALH---  273 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~-g~~vlvDAaQsv~---G~~pldl~~l---  273 (311)
                      ++.+.|++.++++     ++++.++  ++-||..+|.+++   .+ |+++ ++++++|-+-+-.   +.....+...   
T Consensus       154 ~~~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~  228 (402)
T PRK06107        154 LTPEALEAAITPR-----TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPE  228 (402)
T ss_pred             CCHHHHHhhcCcC-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcC
Confidence            7888998888654     3444443  3369999998665   33 5787 9999999765310   1111112111   


Q ss_pred             --CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          274 --RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       274 --~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                        +--+++.|+.| .|| ..|  +|+++..+++.
T Consensus       229 ~~~~vi~~~S~SK-~~~-~pGlRiG~~~~~~~~~  260 (402)
T PRK06107        229 LRDRVLVTNGVSK-TYA-MTGWRIGYAAGPADLI  260 (402)
T ss_pred             ccCCEEEEeccch-hhc-CcccceeeeecCHHHH
Confidence              23466778899 888 447  59998776554

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=98.69  E-value=3.9e-07  Score=92.63  Aligned_cols=167  Identities=12%  Similarity=0.127  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEe
Q 021539          129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      .+.|+.||++++        +++++  |++|+|+++|+.+++..+ ..+||.|+... .+. .....+..+.|+++..+|
T Consensus        97 ~~LR~aiA~~l~~~~g~~v~v~pe~--Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~-~~~~~~~~~~G~~vv~v~  172 (496)
T PLN02376         97 KKFRQAIAHFMGKARGGKVTFDPER--VVMSGGATGANETIMFCL-ADPGDVFLIPSPYYA-AFDRDLRWRTGVEIIPVP  172 (496)
T ss_pred             HHHHHHHHHHHHHHhCCCCcCChhh--EEEccchHHHHHHHHHHh-CCCCCEEEECCCCcc-chHHHHHhhCCCEEEEEe
Confidence            368888888876        56654  999999999999999988 46899886332 222 112222224699999999


Q ss_pred             CCCC-CcccCHHHHHhhhhccC-CCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc---cCccc
Q 021539          200 ETWL-DLRIKGSQLSQNFRRKC-KYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GEDQL  268 (311)
Q Consensus       200 ~~~~-~g~id~~~L~~~l~~~~-~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~pl  268 (311)
                      .+.. +..++.+.+++.++... ...+++++.++  ++=||+++|.+++.+    |+++++++++|-+.+..   +....
T Consensus       173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~  252 (496)
T PLN02376        173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFV  252 (496)
T ss_pred             CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcc
Confidence            8532 34678888876543210 00124444333  335999999887632    57899999999987641   21122


Q ss_pred             CCCCC---------CCc--EEEEccccCcCCCC-CceEEEEEeC
Q 021539          269 ALALH---------RPD--LVLCTLDNNTHAQP-LKITCLLVRR  300 (311)
Q Consensus       269 dl~~l---------~~D--fl~~S~HK~l~G~P-~GiG~L~vr~  300 (311)
                      .+..+         +.|  .++.|+-| .||.| -.+|+++..+
T Consensus       253 si~~l~~~~~~~~~~~~~v~vv~S~SK-~~glpGlRvG~li~~~  295 (496)
T PLN02376        253 SVAEVVNDVDISEVNVDLIHIVYSLSK-DMGLPGFRVGIVYSFN  295 (496)
T ss_pred             cHHHhhccccccccCCCeEEEEEeccc-cCCCCcceEEEEEECC
Confidence            22111         234  34679999 88745 2489999854

>PRK15029 arginine decarboxylase; Provisional

Probab=98.68  E-value=5.6e-07  Score=95.61  Aligned_cols=169  Identities=9%  Similarity=-0.006  Sum_probs=116.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-  203 (311)
                      ...+.+|.+..|+++|++.   .-..|.|+|.|+..++.+. .++||.|+..-.-|-+.+..+. -.|++.++++..++ 
T Consensus       204 ~G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al~-L~ga~Pvyl~P~~~~  278 (755)
T PRK15029        204 TGAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGLI-LTGAKPVYMVPSRNR  278 (755)
T ss_pred             CcHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeEEEecccccc
Confidence            3456799999999999963   3566889999998888876 4789998755543433333332 34888888754321 


Q ss_pred             C---cccC-----HHHHHhhhhccCCC-----CCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-
Q 021539          204 D---LRIK-----GSQLSQNFRRKCKY-----TPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-  267 (311)
Q Consensus       204 ~---g~id-----~~~L~~~l~~~~~~-----~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-  267 (311)
                      .   +.++     .+.+++.++..+..     .+...+.++.- --|+..+++.|.+ ||++|++++||-||..  |.. 
T Consensus       279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F  356 (755)
T PRK15029        279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYG--YARF  356 (755)
T ss_pred             cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccc--cccc
Confidence            1   2344     88898888653210     11124444433 4799999999966 6999999999999874  221 


Q ss_pred             ---cC----C-----CCCCCc-EEEEccccCcCCCCCceEEEEEeCC
Q 021539          268 ---LA----L-----ALHRPD-LVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       268 ---ld----l-----~~l~~D-fl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                         +.    +     ...++| +++-|.|| .+++-+....|-++.+
T Consensus       357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHK-tL~alTQaS~LHv~~~  402 (755)
T PRK15029        357 NPIYADHYAMRGEPGDHNGPTVFATHSTHK-LLNALSQASYIHVREG  402 (755)
T ss_pred             CccccccccccccccccCCCceEEEEchhh-cccchhhhhhheeCCC
Confidence               11    1     125788 99999999 7776788888888765

>PRK08175 aminotransferase; Validated

Probab=98.68  E-value=3.7e-07  Score=89.09  Aligned_cols=164  Identities=12%  Similarity=0.027  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.|++++    |  +++++ +|++|+|+++++++++..+ ..+|+.|+.. ..+... . ..++..|+++..+|.+
T Consensus        70 ~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~-~-~~~~~~g~~~~~v~~~  145 (395)
T PRK08175         70 PRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEGLAHLMLAT-LDHGDTVLVPNPSYPIH-I-YGAVIAGAQVRSVPLV  145 (395)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcch-H-HHHHHcCCeEEEEecc
Confidence            36777777765    3  34431 4999999999999998887 4789998643 333311 1 1123468999999987


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      . ++ ...+++++.++...  .+++++.+.  ++-||.++|.+   +|.+ |+++|+++++|-+-.-.   +.....+..
T Consensus       146 ~-~~-~~~~~l~~~l~~~~--~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~  221 (395)
T PRK08175        146 E-GV-DFFNELERAIRESY--PKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQ  221 (395)
T ss_pred             c-CC-CcHHHHHHHHhhcc--CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhc
Confidence            5 22 24677888776421  124565554  33699999995   4433 68999999999876420   111222211


Q ss_pred             ----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 ----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 ----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                          .+..+++.|+=| .||.| |  +|+++..+++
T Consensus       222 ~~~~~~~~i~~~S~SK-~~g~p-GlRiG~~~~~~~l  255 (395)
T PRK08175        222 VPGAKDVAVEFFTLSK-SYNMA-GWRIGFMVGNPEL  255 (395)
T ss_pred             CCCcccCEEEEeeccc-cccCc-chhheeeeCCHHH
Confidence                123467899999 88755 6  7988876544

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=98.68  E-value=4.8e-07  Score=88.03  Aligned_cols=159  Identities=13%  Similarity=0.104  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.|+.||+++|+++++  |++|+|++++++++...+ ..+||.|+.. ..+.  .....++..|.++..+|.+  ++.+
T Consensus        67 ~~Lr~aia~~~~~~~~~--I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y~--~~~~~~~~~g~~v~~v~~~--~~~~  139 (366)
T PRK01533         67 TTLRQTIANKLHVKMEQ--VLCGSGLDEVIQIISRAV-LKAGDNIVTAGATFP--QYRHHAIIEGCEVKEVALN--NGVY  139 (366)
T ss_pred             HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcHH--HHHHHHHHcCCEEEEeecC--CCCc
Confidence            47999999999998765  999999999999999987 4689988633 2211  1223355679999999986  3458


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-H---HHCCcEEEecccccC-ccCc----ccC-CCCCCC
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-A---HRNAWHVLLDATGLV-FGED----QLA-LALHRP  275 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a---~~~g~~vlvDAaQsv-~G~~----pld-l~~l~~  275 (311)
                      +.++|++.++++     ++++.++  ++-||+++|.+++.+ +   ++++ .+++|-+-.- ....    .+. +...+-
T Consensus       140 d~~~l~~~~~~~-----~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~  213 (366)
T PRK01533        140 DLDEISSVVDND-----TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKN  213 (366)
T ss_pred             CHHHHHHHhCcC-----CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCC
Confidence            999999888754     3455443  336999999988754 2   3344 5777877531 0110    111 111223


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      -+++-|+=| .||.| |  +|+++..+++
T Consensus       214 vi~~~SfSK-~~~l~-GlRiG~~i~~~~~  240 (366)
T PRK01533        214 ILVLRTFSK-AYGLA-SFRVGYAVGHEEL  240 (366)
T ss_pred             EEEEeCchH-HhcCh-HHHHhHHhCCHHH
Confidence            478899999 88844 6  6888765543

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.67  E-value=9e-07  Score=87.52  Aligned_cols=161  Identities=11%  Similarity=-0.010  Sum_probs=107.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~  197 (311)
                      +|......+...+++|++-|+.  .  ++.++++-.|+..++.++ .++||+|+.... +.  ...++.+..+.|+++.+
T Consensus        50 ~R~gnPt~~~le~~la~Le~g~--~--a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~  124 (386)
T PF01053_consen   50 SRYGNPTVRALEQRLAALEGGE--D--ALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTF  124 (386)
T ss_dssp             TTTC-HHHHHHHHHHHHHHT-S--E--EEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEE
T ss_pred             eccccccHHHHHHHHHHhhccc--c--eeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcEEEE
Confidence            6666666678888999999983  2  666788888887777776 578999874433 22  22344455668999998


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCC-cEEEecccccCccCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNA-WHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g-~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      ++..      +.++|+++++++     +++|-+-  .+-+..+.||+.|++ +|++| ++++||.|=+- + ..++-=.+
T Consensus       125 ~d~~------d~~~l~~~l~~~-----t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~at-p-~~~~pL~~  191 (386)
T PF01053_consen  125 VDPT------DLEALEAALRPN-----TKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFAT-P-YNQNPLEL  191 (386)
T ss_dssp             ESTT------SHHHHHHHHCTT-----EEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTH-T-TTC-GGGG
T ss_pred             eCch------hHHHHHhhcccc-----ceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccc-e-eeeccCcC
Confidence            8653      578999999875     5777653  234789999999976 69999 99999999654 3 22222235


Q ss_pred             CCcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          274 RPDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      ++|+++-|+-| .+++...  .|++++++
T Consensus       192 GaDivv~S~TK-yl~Ghsdv~~G~vv~~~  219 (386)
T PF01053_consen  192 GADIVVHSATK-YLSGHSDVMGGAVVVNG  219 (386)
T ss_dssp             T-SEEEEETTT-TTTTSSSE-EEEEEESS
T ss_pred             CceEEEeeccc-cccCCcceeeEEEEECc
Confidence            89999999999 5553422  55555554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK06290 aspartate aminotransferase; Provisional

Probab=98.67  E-value=1.3e-06  Score=86.28  Aligned_cols=164  Identities=13%  Similarity=0.118  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          129 IQARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       129 e~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .+.|+.||+++    |   ++++ .+|++|+|+++++.+++..+ ..+||.|+. ...+..  ....++..|.++..+|.
T Consensus        84 ~~lr~aia~~~~~~~g~~~~~~~-~~I~it~Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~~  159 (410)
T PRK06290         84 QEFKEAAARYMEKVFGVKDIDPV-TEVIHSIGSKPALAMLPSCF-INPGDVTLMTVPGYPV--TGTHTKYYGGEVYNLPL  159 (410)
T ss_pred             HHHHHHHHHHHHHHcCCCcCCCc-ceEEEccCHHHHHHHHHHHh-CCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEec
Confidence            46788888875    4   4443 24999999999999999887 468898853 223321  23345567999999998


Q ss_pred             CCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCcccCC-
Q 021539          201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQLAL-  270 (311)
Q Consensus       201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pldl-  270 (311)
                      +.+ +..++.+.+++.+..+     +++|.+  +++=||+++|.+++   .+ |+++|+++++|-+..-.  +..+..+ 
T Consensus       160 ~~~~~~~~d~~~l~~~~~~~-----~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~  234 (410)
T PRK06290        160 LEENNFLPDLDSIPKDIKEK-----AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFL  234 (410)
T ss_pred             CCCcCCcCCHHHHHHhhccc-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChh
Confidence            742 2456888888877654     345444  34469999997655   33 58899999999987741  1111222 


Q ss_pred             --CC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          271 --AL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       271 --~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                        .. .+.++++-|+=| .||.| |  +|+++..+++.
T Consensus       235 ~~~~~~~~~I~i~SfSK-~~g~~-GlRiG~ii~~~~l~  270 (410)
T PRK06290        235 SVPGAKEVGVEIHSLSK-AYNMT-GWRLAFVVGNELIV  270 (410)
T ss_pred             cCCCccccEEEEeechh-hcCCc-hhheEeEEeCHHHH
Confidence              11 245799999999 88744 7  79998766543

>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]

Probab=98.67  E-value=1.3e-08  Score=104.40  Aligned_cols=204  Identities=17%  Similarity=0.124  Sum_probs=131.1

Q ss_pred             ccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCCcchhhhhHHHHHHHHHHH
Q 021539           57 VEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARNRAL  136 (311)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA  136 (311)
                      |.||.+++     ..+|++.++...+...+.-.|||+.+         ..              ++......+++|-+|.
T Consensus        23 yldhag~t-----l~sesq~~g~~~~sq~~e~~nphs~~---------~t--------------s~~l~~~v~Q~r~ril   74 (728)
T KOG2142|consen   23 YLDHAGRT-----LFSESQLEGVAFQSQSSENANPHSHL---------GT--------------SRSLARLVAQVRLRIL   74 (728)
T ss_pred             HHHhhhhh-----hhhhcccchhhhhhhccccCCCcccc---------cc--------------hHHHHHHHHHHHHHHH
Confidence            78888888     78888887654444446666677755         22              3334556679999999


Q ss_pred             HHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC-CCCEE---EE-ccCcChHH---HHHHHHhCCcEEEEE-eCC--CCCc
Q 021539          137 KHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF-KGNYY---LT-IISEESDY---IKGFAAQKESKVIAA-PET--WLDL  205 (311)
Q Consensus       137 ~~Lga~~dey~VvFTsnaTealnlv~~s~~~~-~Gd~I---ls-~~eh~~~~---~~~la~~~G~~V~~v-p~~--~~~g  205 (311)
                      .+++...++|.++||. .|+|+.+++++|||- .+..+   -+ .+.|-+..   ++.  ...|+-+..+ ..+  |...
T Consensus        75 ~~f~tta~dy~v~lp~-~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~--~~~~~gl~sy~q~~~i~~~~  151 (728)
T KOG2142|consen   75 ALFNTTAFDYEVSLPA-LTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRL--DYSGIGLFSYSQTNEISDSE  151 (728)
T ss_pred             HHhccccccccchhHH-HHHHHHHHHHhCccccccccccchhhhhhcccccccceeee--eeeccceEEeeeeeeccccc
Confidence            9999999999999999 999999999999974 33333   11 11222211   111  1113322222 111  1111


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHH-HHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEA-HRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL  282 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~  282 (311)
                      ..+..+....+.      ...|++.+++  +.|..+-...+..+ -..+++++||++.-+ ..-|+|++...+||... +
T Consensus       152 ~~sls~~~~~ls------~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrv-Saf~Ldaesy~f~~~~~-l  223 (728)
T KOG2142|consen  152 EFSLSESEANLS------EHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRV-SAFPLDAESYPFDFNPK-L  223 (728)
T ss_pred             cccccccccCcc------cchhcccchhcccccceeeeeeecccccCCceEEEEEeeccc-ccccchHhhCCCcccch-h
Confidence            111111111111      2367877766  57776222222333 367999999999999 99999999999999999 9


Q ss_pred             ccCcCCCCCceEEEEEeCCC
Q 021539          283 DNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       283 HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +| +||+|.  |+|.+.++.
T Consensus       224 lt-iFgyet--gAvlv~~r~  240 (728)
T KOG2142|consen  224 LT-IFGYET--GAVLVMNRS  240 (728)
T ss_pred             ee-ecCCCc--hhhHHHhhh
Confidence            99 999997  767666544

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=98.63  E-value=1.1e-06  Score=85.81  Aligned_cols=162  Identities=13%  Similarity=0.062  Sum_probs=101.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCC-CEEE-EccCcChH--HHHHHHH---
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKG-NYYL-TIISEESD--YIKGFAA---  189 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~G-d~Il-s~~eh~~~--~~~~la~---  189 (311)
                      ....++.-++++++++.  +  .++|++++|+|+..++...        ...+| +.|+ .....|..  .+..+..   
T Consensus        82 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~  157 (401)
T PRK00854         82 NDQLAPLYEELAALTGS--H--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPD  157 (401)
T ss_pred             CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcc
Confidence            44556777788898875  2  3999999999988766543        11123 4554 44344421  1111100   


Q ss_pred             ------hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          190 ------QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       190 ------~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                            .....+..+|.      .|.++|++.+.++     +++|.+...  .+|.+.|    +++|.+ |+++|+++++
T Consensus       158 ~~~~~~~~~~~~~~~~~------~d~~~le~~i~~~-----~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~  226 (401)
T PRK00854        158 ARGGFGPFTPGFRVVPF------GDAEALEAAITPN-----TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLIL  226 (401)
T ss_pred             ccccCCCCCCCeEEeCC------CCHHHHHHHhCCC-----eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence                  00123333433      2568888888654     466666443  5899998    888865 7999999999


Q ss_pred             ccccc-CccCccc----CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          257 DATGL-VFGEDQL----ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQs-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |.+|+ + |....    +.....+|+++++  |++.|+=--+|+++.+++..+
T Consensus       227 DEv~~g~-g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~  276 (401)
T PRK00854        227 DEIQTGL-GRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLG  276 (401)
T ss_pred             echhhCC-CCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHh
Confidence            99998 6 76542    2223468999997  955442112788888876544

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=98.62  E-value=7.3e-07  Score=85.65  Aligned_cols=162  Identities=13%  Similarity=0.076  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC-Ccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL-DLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~-~g~  206 (311)
                      .+.|+.||+++++++++  |++|+|+++++++++..+ .++||.|+.. ..+. . ....++..|.++..+|++.. +..
T Consensus        68 ~~lr~~ia~~~~~~~~~--I~it~G~~~al~~~~~~~-~~~gd~V~v~~P~y~-~-~~~~~~~~g~~~~~~~l~~~~~~~  142 (357)
T PRK14809         68 ADLTAALADRWDVSPEQ--VWLANGGDGALDYLARAM-LDPGDTVLVPDPGFA-Y-YGMSARYHHGEVREYPVSKADDFE  142 (357)
T ss_pred             HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChH-H-HHHHHHHcCCeEEEEecccCcCCC
Confidence            47999999999998765  999999999999999887 4789987632 1211 1 12223456888988887532 234


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HH--HCCcEEEecccccCccCcc--cCC-CCCCCcEE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AH--RNAWHVLLDATGLVFGEDQ--LAL-ALHRPDLV  278 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQsv~G~~p--ldl-~~l~~Dfl  278 (311)
                      ++.+.+.+... +     ++++.++  ++-||+.+|.+++.+ ++  +.+.++++|-+..-....+  +.. ...+-=++
T Consensus       143 ~~~~~~~~~~~-~-----~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~  216 (357)
T PRK14809        143 QTADTVLDAYD-G-----ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAV  216 (357)
T ss_pred             cCHHHHHHhhc-C-----CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEE
Confidence            56666655442 2     3454443  225999999988754 33  2478899999876311111  111 11111266


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.|+=| .||.| |  +|+++..++..
T Consensus       217 ~~SfSK-~~~~~-GlRiG~~~~~~~~~  241 (357)
T PRK14809        217 LRTFSK-AYGLA-GLRLGYAVVPEEWA  241 (357)
T ss_pred             Eecchh-HhcCc-chhheeeecCHHHH
Confidence            778899 88844 6  79888776543

>PRK08068 transaminase; Reviewed

Probab=98.60  E-value=1e-06  Score=85.78  Aligned_cols=163  Identities=13%  Similarity=0.120  Sum_probs=108.9

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++    |  +++++ +|+.|+|+++++.+++..+ ..+|+.|+.. ..+. . ....++..|++++.+|.+.
T Consensus        74 ~lr~aia~~~~~~~g~~~~~~~-~i~it~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~-~-~~~~~~~~g~~~~~i~~~~  149 (389)
T PRK08068         74 FLKEAAADFYKREYGVTLDPET-EVAILFGGKAGLVELPQCL-MNPGDTILVPDPGYP-D-YLSGVALARAQFETMPLIA  149 (389)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcHHHHHHHHHHh-CCCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEeeccc
Confidence            6788888886    5  44441 4999999999999988877 3688987632 2222 1 1223455699999999864


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      + +..++.+++++.++.+     +++|.+  +++=||+++|.+++.   + |+++++++++|-+..-.   +..+..+-.
T Consensus       150 ~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~  224 (389)
T PRK08068        150 ENNFLPDYTKIPEEVAEK-----AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQ  224 (389)
T ss_pred             ccCCCCCHHHHHHhcccc-----ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhh
Confidence            3 3356888888887644     344443  344699999997653   2 57899999999986421   112222211


Q ss_pred             ----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 ----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 ----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                          .+..+++.|+=| .||.| |  +|+++..+++.
T Consensus       225 ~~~~~~~~i~~~S~SK-~~g~~-GlRiG~~~~~~~l~  259 (389)
T PRK08068        225 TPGAKDVGIELYTLSK-TFNMA-GWRVAFAVGNESVI  259 (389)
T ss_pred             CCCccCCEEEEecchh-ccCCc-cceeEeEecCHHHH
Confidence                123478889999 88844 7  89998776554

>PTZ00377 alanine aminotransferase; Provisional

Probab=98.57  E-value=6.9e-07  Score=89.92  Aligned_cols=166  Identities=5%  Similarity=-0.078  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.||++++      ++++  +|++|+|+++|+.+++..+...+||.|+... .+. . ....++..|.++..+|.
T Consensus       117 ~~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~-~-y~~~~~~~g~~~v~v~~  192 (481)
T PTZ00377        117 YPFVRKAVAAFIERRDGVPKDPS--DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYP-L-YSAAITLLGGKQVPYYL  192 (481)
T ss_pred             CHHHHHHHHHHHHHhcCCCCChh--hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCch-h-HHHHHHHcCCEEEEEEe
Confidence            3478999999875      4554  4999999999999999887435899886432 222 1 22334556999999998


Q ss_pred             CCCC-cccCHHHHHhhhhccCCC-CCceEEE-E-ecccccchhcHH---HHHH-HHHCCcEEEecccccCccC---cc-c
Q 021539          201 TWLD-LRIKGSQLSQNFRRKCKY-TPKGLFS-Y-PVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGE---DQ-L  268 (311)
Q Consensus       201 ~~~~-g~id~~~L~~~l~~~~~~-~~t~LVs-~-~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~---~p-l  268 (311)
                      +..+ ..++.++|++.+.+..++ .+++++. + +++=||.+++.+   +|.+ |+++++++++|-+-.-.-.   .+ .
T Consensus       193 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~  272 (481)
T PTZ00377        193 DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFI  272 (481)
T ss_pred             ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcc
Confidence            6432 367899999988641100 0244443 3 234699999955   4544 5889999999987542000   01 1


Q ss_pred             CC----CCCCCc-------EEEEccccCcCCCCCc--eEEEEE
Q 021539          269 AL----ALHRPD-------LVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       269 dl----~~l~~D-------fl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      .+    ..+..+       +++-|+=|.++| ..|  +|.+++
T Consensus       273 s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~-~~GlRiG~~~~  314 (481)
T PTZ00377        273 SFRKVLLELPAEYNTDVELVSFHSTSKGIIG-ECGRRGGYFEL  314 (481)
T ss_pred             cHHHHHHhhcccccCCeEEEEEecCCccccc-CCcCceEEEEE
Confidence            11    011111       455688994465 334  788876

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.57  E-value=3.1e-07  Score=90.15  Aligned_cols=165  Identities=14%  Similarity=0.024  Sum_probs=110.2

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc----cCcChHHHH-HHHHhCCcE
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI----ISEESDYIK-GFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~----~eh~~~~~~-~la~~~G~~  194 (311)
                      |-+....+ +-|.++..++||++-.+  |= --+++.|+..+..++ .++||.|+..    -+|-+...+ .+... -++
T Consensus        66 Gce~VD~vE~laierak~LFga~~an--VQ-PhSGs~AN~av~~Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~-~~~  140 (413)
T COG0112          66 GCEYVDEVEELAIERAKKLFGAEYAN--VQ-PHSGSQANQAVYLAL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGK-LFN  140 (413)
T ss_pred             CCeeHHHHHHHHHHHHHHHhCCCccc--cC-CCCchHHHHHHHHHH-cCCCCeEecccCCCCCcccCCCCCCccce-eEE
Confidence            44444444 46999999999996322  32 236677877777776 5799998622    122211110 11111 156


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----c
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-----L  268 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-----l  268 (311)
                      +..-+++.+++.||.|++++...+.    +.+|+.+-...--...|++++.+ |.+.|+++++|++|-+ |.+-     =
T Consensus       141 ~v~Y~vd~et~~IDyD~~~k~a~e~----kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHia-GLVA~G~~p~  215 (413)
T COG0112         141 VVSYGVDPETGLIDYDEVEKLAKEV----KPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVA-GLIAGGVHPN  215 (413)
T ss_pred             eEecccccccCccCHHHHHHHHHHh----CCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHH-HHHhcccCCC
Confidence            6667788767999999999887763    24566654434667889999987 5899999999999987 6543     3


Q ss_pred             CCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       269 dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      ++.  .+|+++.|-||++.| |+| |+.+.+
T Consensus       216 P~~--~AdvVTtTTHKTlrG-PrG-G~Il~~  242 (413)
T COG0112         216 PLP--HADVVTTTTHKTLRG-PRG-GIILTN  242 (413)
T ss_pred             CCC--ccceEeCCcccCCCC-CCc-eEEEec
Confidence            343  289999999997777 975 344434

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=98.54  E-value=1.8e-06  Score=84.40  Aligned_cols=160  Identities=14%  Similarity=0.020  Sum_probs=113.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      +...++||.+=|--.    -+.|+++..|+-.++..+ .+.||+|++... +-  .+......++.|++|+++..+    
T Consensus        65 ~vlE~RiAaLEGG~a----a~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~----  135 (426)
T COG2873          65 DVLEERIAALEGGVA----ALAVASGQAAITYAILNL-AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD----  135 (426)
T ss_pred             HHHHHHHHHhhcchh----hhhhccchHHHHHHHHHh-ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC----
Confidence            456667887777532    345666667776666665 368999984332 11  333444457789999998654    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL  282 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~  282 (311)
                        +++.+++.+++++     ++|-+ +.. --+.+.|++.|++ ||++|++++||-+=+- +.. +.--++++|.++=|.
T Consensus       136 --d~~~~~~aI~~nT-----kavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at-pyl-~rP~~hGADIVvHS~  206 (426)
T COG2873         136 --DPENFEAAIDENT-----KAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT-PYL-CRPIEHGADIVVHSA  206 (426)
T ss_pred             --CHHHHHHHhCccc-----ceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc-cee-cchhhcCCCEEEEee
Confidence              4789999999874     55543 322 3688999999987 6999999999998655 422 222347999999999


Q ss_pred             ccCcCCCCCceEEEEEeCCCCccc
Q 021539          283 DNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       283 HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      -||+.|.-..+|..+|....+|-+
T Consensus       207 TK~igGhGt~iGG~iVD~G~FDw~  230 (426)
T COG2873         207 TKYIGGHGTAIGGVIVDGGKFDWT  230 (426)
T ss_pred             cccccCCccccceEEEeCCccccc
Confidence            996666556799999998887754

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=98.54  E-value=1.5e-06  Score=84.57  Aligned_cols=163  Identities=13%  Similarity=0.018  Sum_probs=102.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--------C-CCCCEEE-EccCcChHHHHHHHHhCCc-
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--------F-FKGNYYL-TIISEESDYIKGFAAQKES-  193 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--------~-~~Gd~Il-s~~eh~~~~~~~la~~~G~-  193 (311)
                      ....+++++.++++++.  +  .++|++++|+|+..++....        + ..++.|+ ....+|...+..+....+. 
T Consensus        72 ~~~~~~~~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~  147 (400)
T PTZ00125         72 NDVLGLAEKYITDLFGY--D--KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPK  147 (400)
T ss_pred             CHHHHHHHHHHHhCCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcc
Confidence            45678899999999875  2  39999999999876655321        1 1234565 4444552222111111110 


Q ss_pred             ----------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          194 ----------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       194 ----------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                                .+..++.      .++++|++.++.+    .+++|.+...  .+|.+.|    +++|.+ |+++|+++++
T Consensus       148 ~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~----~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~  217 (400)
T PTZ00125        148 CYNNFGPFVPGFELVDY------NDVEALEKLLQDP----NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIV  217 (400)
T ss_pred             hhccCCCCCCCceEeCC------CCHHHHHHHhCCC----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence                      1112221      2678899888621    2567766333  6999998    888866 6999999999


Q ss_pred             ccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          257 DATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |.+|. + |..    ..+.....+|++++|  |++.|+-..+|+++.+++..+
T Consensus       218 Dev~~g~-g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~  267 (400)
T PTZ00125        218 DEIQTGL-GRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVML  267 (400)
T ss_pred             eccccCC-CccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHh
Confidence            99986 4 532    233344578999988  944432125899999876544

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=98.53  E-value=1.6e-06  Score=84.27  Aligned_cols=165  Identities=11%  Similarity=0.091  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.||+++    |  +++++ +|+.|+|+++|+.++...+ ..+||.|+.. -.+. . ....++..|.++..+|.+
T Consensus        71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~~al~~~~~~l-~~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~  146 (388)
T PRK07366         71 LDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQEGTAHLPLAV-LNPGDFALLLDPGYP-S-HAGGVYLAGGQIYPMPLR  146 (388)
T ss_pred             HHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcHHHHHHHHHHh-CCCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEEECC
Confidence            36888888877    4  55441 4999999999999999886 3689987532 2211 1 123345569999999986


Q ss_pred             CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc---cCc-ccCC
Q 021539          202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GED-QLAL  270 (311)
Q Consensus       202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~-pldl  270 (311)
                      .++ -.++.+++.+.+.++     ++++.++  ++=||..++.+++.+    |+++++++++|-+-.-.   +.. ...+
T Consensus       147 ~~~~~~~d~~~l~~~~~~~-----~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~  221 (388)
T PRK07366        147 AENDFLPVFADIPTEVLAQ-----ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSI  221 (388)
T ss_pred             CccCCCCCHHHHHHhhccc-----ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCCh
Confidence            432 245677777666543     3454443  335999999887633    57899999999764310   211 1122


Q ss_pred             CCCC----CcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          271 ALHR----PDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~----~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      ..+.    .-+++.|+=| .||.| -.+|.++..+++.
T Consensus       222 ~~~~~~~~~vi~~~SfSK-~~g~~GlRiG~~v~~~~li  258 (388)
T PRK07366        222 LQADPEKSVSIEFFTLSK-SYNMGGFRIGFAIGNAQLI  258 (388)
T ss_pred             hhCCCCcccEEEEeeccc-ccCCcchhheehcCCHHHH
Confidence            2221    2267789999 88745 1388888766553

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=98.53  E-value=1.4e-06  Score=84.01  Aligned_cols=151  Identities=17%  Similarity=0.067  Sum_probs=93.2

Q ss_pred             HHHHHHHHHc-------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHC-------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~L-------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.+++++       |++++  +|++|+|+++++.++...+..++||.|+.. ..+..  ....++..|.++..++  
T Consensus        60 ~lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~--  133 (357)
T TIGR03539        60 ELREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPT--YEVGALLAGATPVAAD--  133 (357)
T ss_pred             HHHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHH--HHHHHHhcCCEEeccC--
Confidence            4566666666       46555  599999999999998877645789998743 23321  2233455688776553  


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccCcccCCCCC--
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQLALALH--  273 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l--  273 (311)
                        +    .+++.   ..+     ++++.++  ++-||..+|.++   |.+ |+++|+++++|.+.......+-.+..+  
T Consensus       134 --~----~~~l~---~~~-----~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  199 (357)
T TIGR03539       134 --D----PTELD---PVG-----PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP  199 (357)
T ss_pred             --C----hhhcC---ccC-----ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence              1    12221   122     4555554  225999998665   433 688999999999875212111111111  


Q ss_pred             -------CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          274 -------RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       274 -------~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                             .--+++.|+-| .||.| |  +|.++..++.
T Consensus       200 ~~~~~~~~~vi~~~S~SK-~~~~~-G~R~G~~i~~~~~  235 (357)
T TIGR03539       200 RVCGGDHTGLLAVHSLSK-RSNLA-GYRAGFVAGDPAL  235 (357)
T ss_pred             ccCCCccccEEEEecccc-ccCCC-ceeEEEEecCHHH
Confidence                   12488889999 88744 6  6888765543

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=98.50  E-value=3.3e-06  Score=81.98  Aligned_cols=166  Identities=10%  Similarity=0.007  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC-EEEEc-cCcChHHHHHHHHhCCcEEEEE
Q 021539          129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGN-YYLTI-ISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd-~Ils~-~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      .+.|+.||++++        ++++  +|++|+|+++++..++.++. .+|+ .|+.. -.+  ......++..|.++..+
T Consensus        69 ~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~y--~~~~~~~~~~g~~~~~~  143 (374)
T PRK02610         69 EALKQAIAEYVNESAAGSSQITPA--NISVGNGSDELIRSLLIATC-LGGEGSILVAEPTF--SMYGILAQTLGIPVVRV  143 (374)
T ss_pred             HHHHHHHHHHhCccccccCCCCHH--HEEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCCh--HHHHHHHHHcCCEEEEe
Confidence            478999999998        6655  49999999999987666543 2454 56422 111  11234456679999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHH--HCCcEEEecccccCc-cCccc-CCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAH--RNAWHVLLDATGLVF-GEDQL-ALAL  272 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~--~~g~~vlvDAaQsv~-G~~pl-dl~~  272 (311)
                      |.+..+..++.++|+++++... ..++++|.++  ++=||+.++.+++.++.  .+++++++|-+-.-. +...+ .+..
T Consensus       144 ~~~~~~~~~d~~~l~~~~~~~~-~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~  222 (374)
T PRK02610        144 GRDPETFEIDLAAAQSAIEQTQ-NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQ  222 (374)
T ss_pred             cCCcccCCCCHHHHHHHHHhhc-CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhc
Confidence            8764334688999988886300 0124555443  33599999998886542  248999999986420 21111 1221


Q ss_pred             CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ..-=+++.|+=| .||.| |  +|+++..+++
T Consensus       223 ~~~~ivi~SfSK-~~g~~-GlRiG~~v~~~~l  252 (374)
T PRK02610        223 HPNWVILRTFSK-AFRLA-AHRVGYAIGHPEL  252 (374)
T ss_pred             CCCEEEEEecch-hccCc-ccceeeeecCHHH
Confidence            111267789999 88744 5  8988876544

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.49  E-value=1.4e-06  Score=85.97  Aligned_cols=155  Identities=17%  Similarity=0.166  Sum_probs=99.3

Q ss_pred             HHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH----HHHHHHHhCCcEEEEEeCCCCCcccCHHHH
Q 021539          137 KHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD----YIKGFAAQKESKVIAAPETWLDLRIKGSQL  212 (311)
Q Consensus       137 ~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~----~~~~la~~~G~~V~~vp~~~~~g~id~~~L  212 (311)
                      .+++++..+ .++.+.|.+.|+-+++.++.  .+.+++...+|..+    .+....+.-|+++..+.-   ..+....++
T Consensus        76 ~~~~~~~ae-a~~ivnnn~aAVll~~~al~--~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---tn~t~~~d~  149 (395)
T COG1921          76 LLCGLTGAE-AAAIVNNNAAAVLLTLNALA--EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---TNRTHLKDY  149 (395)
T ss_pred             HHhcccchh-heeeECCcHHHHHHHHhhhc--cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---cCcCCHHHH
Confidence            345554222 47788888888887777764  34555433332211    233334445887765543   335678889


Q ss_pred             HhhhhccCCCCCceEEE-Eecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-cccCCC---CCCCcEEEEcccc
Q 021539          213 SQNFRRKCKYTPKGLFS-YPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQLALA---LHRPDLVLCTLDN  284 (311)
Q Consensus       213 ~~~l~~~~~~~~t~LVs-~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pldl~---~l~~Dfl~~S~HK  284 (311)
                      +.++.+++    ..++- .+++  ++| -.+.+++.+ +|++|+++++|++... -- ..-++.   +.++|.++||+||
T Consensus       150 ~~AIne~t----a~llkV~s~~~~f~~-~l~~~~l~~ia~~~~lpvivD~aSg~-~v~~e~~l~~~la~GaDLV~~SgdK  223 (395)
T COG1921         150 ELAINENT----ALLLKVHSSNYGFTG-MLSEEELVEIAHEKGLPVIVDLASGA-LVDKEPDLREALALGADLVSFSGDK  223 (395)
T ss_pred             HHHhccCC----eeEEEEeeccccccc-cccHHHHHHHHHHcCCCEEEecCCcc-ccccccchhHHHhcCCCEEEEecch
Confidence            99998874    22332 2333  244 356777755 7999999999998755 21 122333   2689999999999


Q ss_pred             CcCCCCCceEEEEEeCCCCcc
Q 021539          285 NTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       285 ~l~G~P~GiG~L~vr~~~~~~  305 (311)
                       ++|+|+ .|+++-|+++++.
T Consensus       224 -llgGPq-aGii~GkKelI~~  242 (395)
T COG1921         224 -LLGGPQ-AGIIVGKKELIEK  242 (395)
T ss_pred             -hcCCCc-cceEechHHHHHH
Confidence             998897 8999988877653

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.49  E-value=2.3e-06  Score=92.55  Aligned_cols=158  Identities=12%  Similarity=0.032  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC--CCCEEE-EccCcC--hHHHHHHHHhCCcEEEEEeCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF--KGNYYL-TIISEE--SDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~--~Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +-+-+.-|+++.|.+..+  .-+..++|.+.+.++.++...  ++++|+ +...|+  ...++..++..|++|+.++.  
T Consensus       111 l~e~Qt~i~eLtGm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~--  186 (939)
T TIGR00461       111 LLNFQTVVSDLTGLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC--  186 (939)
T ss_pred             HHHHHHHHHHHHCCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH--
Confidence            447888999999997544  677889998877666554322  335664 566677  34566566777999887643  


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEec-ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV-VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                             ++|++.+  +     +..|.++. +..|.+.++++|.+ +|++|+++++++-+.. .....+-.++++|+++.
T Consensus       187 -------~~l~~~~--~-----~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~a-l~ll~~Pge~GaDi~vg  251 (939)
T TIGR00461       187 -------SDIKKAV--D-----VFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMA-LTLLTPPGHYGADIVLG  251 (939)
T ss_pred             -------HHHhhcC--C-----EEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHH-hCCcCCHHHcCCcEEee
Confidence                   2344443  1     22222222 26899999999965 6999999999988888 77888888899999988


Q ss_pred             ccccC----cCCCCCceEEEEEeCCCCcc
Q 021539          281 TLDNN----THAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       281 S~HK~----l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++++|    -||+| +.|++.+|++....
T Consensus       252 ~~q~fg~p~g~GGP-~aG~~a~~~~l~r~  279 (939)
T TIGR00461       252 SSQRFGVPMGYGGP-HAAFFAVKDEYNRK  279 (939)
T ss_pred             CCCccCCCCCCCCC-ceeeeeecHhhHhh
Confidence            88885    24557 69999999876554

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=98.48  E-value=4.2e-06  Score=81.63  Aligned_cols=164  Identities=15%  Similarity=0.071  Sum_probs=105.8

Q ss_pred             HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCC---CCEEEEc-cCcChHHHHHHHHhCCcEEEEE
Q 021539          130 QARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFK---GNYYLTI-ISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       130 ~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~---Gd~Ils~-~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      +.|+.||+++    |   ++++ .+|++|+|+++++.+++..+. .+   |+.|+.. -...  .....++..|+++..+
T Consensus        69 ~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~v  144 (396)
T PRK09147         69 ALREAIAAWLERRYGLPALDPA-TQVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPNPFYQ--IYEGAALLAGAEPYFL  144 (396)
T ss_pred             HHHHHHHHHHHHHhCCCcCCcc-ceEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcCCCcc--chHHHHHhcCCEEEEe
Confidence            5777888765    6   4433 259999999999999988873 55   7777633 1211  1223345569999999


Q ss_pred             eCCCCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH---H-HHHCCcEEEecccccCc--cC--cc
Q 021539          199 PETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF--GE--DQ  267 (311)
Q Consensus       199 p~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~--G~--~p  267 (311)
                      |.+.++ ..++.+++++.+.++     ++++.++  ++=||.+++.+++.   + |+++++++++|=+-.-.  ..  .+
T Consensus       145 p~~~~~~~~~d~~~l~~~~~~~-----~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~  219 (396)
T PRK09147        145 NCDPANNFAPDFDAVPAEVWAR-----TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPP  219 (396)
T ss_pred             ccCccccCccCHHHHHHHHhhc-----cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCC
Confidence            986422 357889998777654     3454443  33599999877653   2 57899999999986531  11  11


Q ss_pred             cC-C---CCCCCc-----EEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          268 LA-L---ALHRPD-----LVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       268 ld-l---~~l~~D-----fl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      .. +   ...+.|     +++.|+=| .||.| ..+|+++..+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~~GlRiG~~~~~~~l~  264 (396)
T PRK09147        220 LGLLEAAAELGRDDFKRLVVFHSLSK-RSNVPGLRSGFVAGDAALL  264 (396)
T ss_pred             chhhhhccccCccccccEEEEecccc-ccCCccceeeeecCCHHHH
Confidence            11 1   011222     88899999 77745 2388888766543

>PRK08636 aspartate aminotransferase; Provisional

Probab=98.48  E-value=3.8e-06  Score=82.29  Aligned_cols=167  Identities=11%  Similarity=0.046  Sum_probs=103.0

Q ss_pred             HHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..|+.||+++    |.+.+.. +|++|+|+++|+.+++..+. .+||.|+.. -.+. . ....++..|.+++.+|.+.+
T Consensus        75 ~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~~~  151 (403)
T PRK08636         75 KLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT-NPGDVAIVPDPAYP-I-HSQAFILAGGNVHKMPLEYN  151 (403)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC-CCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEEecccc
Confidence            5777888876    6432222 59999999999999999874 689988632 2222 1 22334556999999887521


Q ss_pred             -CcccCHHH----HHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccC
Q 021539          204 -DLRIKGSQ----LSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLA  269 (311)
Q Consensus       204 -~g~id~~~----L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pld  269 (311)
                       +..++.+.    ++++++...  .+++++.++  ++=||..+|.+++   .+ |++++++++.|-+-.-.   +.....
T Consensus       152 ~~~~~d~~~l~~~l~~~~~~~~--~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~  229 (403)
T PRK08636        152 EDFELDEDQFFENLEKALRESS--PKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS  229 (403)
T ss_pred             ccCccChhhhhhHHHHHHhhcc--CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC
Confidence             23567664    455554311  124444443  4469999998765   23 58899999999875420   111122


Q ss_pred             CCCC----CCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539          270 LALH----RPDLVLCTLDNNTHAQPL-KITCLLVRRKS  302 (311)
Q Consensus       270 l~~l----~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~  302 (311)
                      +..+    +.-+++.|+=| .||.|- .+|+++..+++
T Consensus       230 ~~~~~~~~~~~i~~~S~SK-~~~~~GlRiG~iv~~~~l  266 (403)
T PRK08636        230 ILEVEGAKDVAVESYTLSK-SYNMAGWRVGFVVGNKKL  266 (403)
T ss_pred             hhcCCCccccEEEEEeccc-ccCCccceeeeeeCCHHH
Confidence            2222    22345679999 876441 38888766544

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=98.46  E-value=2.7e-06  Score=82.98  Aligned_cols=161  Identities=16%  Similarity=0.087  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChH--HHHHHHHh---------CCcE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESD--YIKGFAAQ---------KESK  194 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~--~~~~la~~---------~G~~  194 (311)
                      ..+..+.++++++.+ +...|+||+|++||+..++..... .| +.+++. ..+|..  ....+...         .+..
T Consensus        87 ~~~la~~l~~~~~~~-~~~~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~  164 (398)
T PRK03244         87 QIALAERLVELLGAP-EGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGG  164 (398)
T ss_pred             HHHHHHHHHHhCCCC-CCCEEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCC
Confidence            356777888888853 212599999999999988764322 33 345432 344422  11111100         0112


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ  267 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p  267 (311)
                      +..+|.      .+.+.|++.+.++     +++|.+ +.+ .+|.+.|    +++|.+ |+++|+++++|-+|+-.|..-
T Consensus       165 ~~~~~~------~d~~~l~~~~~~~-----~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g  233 (398)
T PRK03244        165 VEHVPY------GDVDALAAAVDDD-----TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG  233 (398)
T ss_pred             ceEeCC------CCHHHHHHhhcCC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc
Confidence            233332      1567888887543     455554 333 5899998    778865 699999999999996213221


Q ss_pred             --c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          268 --L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       268 --l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                        +  ......+|+++||  | .+|+.-.+|+++.+++..+
T Consensus       234 ~~~~~~~~~~~pDi~t~s--K-~l~~G~~ig~~~~~~~~~~  271 (398)
T PRK03244        234 AWFAHQHDGVTPDVVTLA--K-GLGGGLPIGACLAFGPAAD  271 (398)
T ss_pred             hHHhhhhhCCCCCEEEEc--h-hhhCCcccEEEEEcHHHHh
Confidence              2  3334569998776  9 5552234899999876544

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=98.46  E-value=2.2e-06  Score=82.55  Aligned_cols=151  Identities=16%  Similarity=0.086  Sum_probs=94.1

Q ss_pred             HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.||+++    |   ++++  +|++|+|+++++.++...+...+|+.|+... .+. . ....++..|+++..++. 
T Consensus        66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~-~-~~~~~~~~g~~~~~~~~-  140 (364)
T PRK07865         66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYP-T-YEVGARLAGATVVRADS-  140 (364)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcc-c-HHHHHHhcCCEEEecCC-
Confidence            5677788877    4   5455  4999999999999887766457899886432 332 1 22233445888766542 


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCCCC---
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLALAL---  272 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl~~---  272 (311)
                             .+++.+   .+     +++|.+.  ++=||.+++.+++   .+ |+++|+++++|.+..-.....-.+..   
T Consensus       141 -------~~~l~~---~~-----~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~  205 (364)
T PRK07865        141 -------LTELGP---QR-----PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDP  205 (364)
T ss_pred             -------hhhCCc---cc-----ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccc
Confidence                   122221   22     3555543  2259999997654   33 58899999999997631111101111   


Q ss_pred             ------CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 ------HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 ------l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                            .+-.+++.|+-| .||.| |  +|+++..++.
T Consensus       206 ~~~~~~~~~~i~~~S~SK-~~~~~-GlRiG~i~~~~~~  241 (364)
T PRK07865        206 RVCGGDHTGLLAVHSLSK-QSNLA-GYRAGFVAGDPAL  241 (364)
T ss_pred             cccCCccceEEEEeechh-ccCCC-ceeeEEEecCHHH
Confidence                  122488999999 88744 5  8888766544

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=98.41  E-value=7.4e-06  Score=80.99  Aligned_cols=159  Identities=6%  Similarity=-0.006  Sum_probs=107.1

Q ss_pred             HHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          130 QARNRALKHCGL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       130 ~aR~~IA~~Lga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      +.|+.++++++.  .++ .+|+.|+|+++++.+++..+. .+||.|+.. -.+. . ....++..|+++..+|.+. ++ 
T Consensus       125 ~lr~~ia~~~~~~~~~~-~~Iiit~G~~~al~~~~~~l~-~pgd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~~-~g-  198 (431)
T PRK15481        125 ELHAWAARWLRDDCPVA-FEIDLTSGAIDAIERLLCAHL-LPGDSVAVEDPCFL-S-SINMLRYAGFSASPVSVDA-EG-  198 (431)
T ss_pred             HHHHHHHHHHhhccCCc-CeEEEecCcHHHHHHHHHHhC-CCCCEEEEeCCCcH-H-HHHHHHHcCCeEEeeccCC-CC-
Confidence            578888888773  322 259999999999999999873 689987632 2221 2 2344566799999999864 44 


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEE-e-cccccchhcHH---HHHH-HHHC-CcEEEecccccCc---cCcc-cCCCCCCC
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSY-P-VVVNGTRYSMH---WISE-AHRN-AWHVLLDATGLVF---GEDQ-LALALHRP  275 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~-~-~~~tG~i~Pi~---~I~~-a~~~-g~~vlvDAaQsv~---G~~p-ldl~~l~~  275 (311)
                      ++.+.|++++++++    +.++.+ + ++=||+.++.+   +|.+ |+++ +++++.|-+-.-.   +..+ +.. ..+-
T Consensus       199 ~~~~~l~~~~~~~~----k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~  273 (431)
T PRK15481        199 MQPEKLERALAQGA----RAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ-TTQR  273 (431)
T ss_pred             CCHHHHHHHHhcCC----CEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC-CCCC
Confidence            78999998887542    233433 2 33599999997   5544 5777 9999999765420   1111 111 1123


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      -+++.|+-| .|| | |  +|+++..+++
T Consensus       274 vi~~~SfSK-~~~-~-GlRiG~~i~~~~~  299 (431)
T PRK15481        274 WALIRSVSK-ALG-P-DLRLAFVASDSAT  299 (431)
T ss_pred             EEEEeeecc-ccC-C-CceeEEEeCCHHH
Confidence            488899999 998 7 5  7888776543

>PRK06855 aminotransferase; Validated

Probab=98.40  E-value=1.1e-05  Score=80.25  Aligned_cols=161  Identities=12%  Similarity=0.090  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.||+++    |  ++++  +|++|+|+++|+.+++. + ..+||.|+.. ..++. .........|+++..+|.+
T Consensus        76 ~~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~-~~~~~~~~~g~~~v~v~~~  150 (433)
T PRK06855         76 LETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYST-HSSAEAAHAGYPPVTYRLD  150 (433)
T ss_pred             HHHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCch-HHHHHHHhcCCeEEEEecc
Confidence            47888888887    3  4554  49999999999998874 4 4689988632 22221 1111112347888888876


Q ss_pred             CCC-cccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      ..+ -.++.++|++.++...   +++++.+  +++=||.++|.+++.   + |++++++++.|-+-.-.   +.....+.
T Consensus       151 ~~~~~~~d~~~l~~~~~~~~---~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~  227 (433)
T PRK06855        151 PENNWYPDLDDLENKVKYNP---SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLS  227 (433)
T ss_pred             cccCCCCCHHHHHHHHhcCC---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHH
Confidence            322 2478999998886321   1333332  344599999987653   2 57899999999986421   21122222


Q ss_pred             CC---CCcEEEEccccCcCCCCC-ceEEEEE
Q 021539          272 LH---RPDLVLCTLDNNTHAQPL-KITCLLV  298 (311)
Q Consensus       272 ~l---~~Dfl~~S~HK~l~G~P~-GiG~L~v  298 (311)
                      .+   ..-+++.|+=| .|+.|- -+|++++
T Consensus       228 ~~~~~~~~I~~~S~SK-~~~~pGlRiG~ii~  257 (433)
T PRK06855        228 EVIGDVPGIALKGISK-ELPWPGSRCGWIEV  257 (433)
T ss_pred             HHcCcCCeEEEecCcc-ccCCCcceEEEEEE
Confidence            11   12378899999 776451 3898887

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=98.40  E-value=4.3e-06  Score=80.51  Aligned_cols=160  Identities=16%  Similarity=0.120  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc-
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR-  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~-  206 (311)
                      .+.|+.||+++++++++  |++|+|+++++.+++..+.  +|+.|+.. -.+ .. ....++..|.++..+|.+..++. 
T Consensus        60 ~~Lr~aia~~~~v~~~~--I~it~G~~~~i~~~~~~l~--~g~~vlv~~P~y-~~-~~~~~~~~g~~~~~v~~~~~~~~~  133 (360)
T PRK07392         60 RELRLALAQHHQLPPEW--ILPGNGAAELLTWAGRELA--QLRAVYLITPAF-GD-YRRALRAFGATVKELPLPLDQPSP  133 (360)
T ss_pred             HHHHHHHHHHhCcChhh--EEECCCHHHHHHHHHHHhC--CCCeEEEECCCc-HH-HHHHHHHcCCeEEEEecccccCCc
Confidence            37899999999998765  9999999999999988763  56776532 121 11 23445567999999998643322 


Q ss_pred             ---cCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH-HHHCCcEEEecccccCc---cCcc--cC-CCCCC
Q 021539          207 ---IKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF---GEDQ--LA-LALHR  274 (311)
Q Consensus       207 ---id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~---G~~p--ld-l~~l~  274 (311)
                         .+.+++.+... +     ++++.+  +++=||..++-++|.+ ++++++ +++|-+-.-.   +..+  ++ +....
T Consensus       134 ~~~~~~~~~~~~~~-~-----~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~  206 (360)
T PRK07392        134 GLTLRLQTLPPQLT-P-----NDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP  206 (360)
T ss_pred             ccccCHHHHHHhcc-C-----CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC
Confidence               34444443322 1     344443  3446999999999866 577776 6669875420   1100  11 11111


Q ss_pred             CcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          275 PDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                      -=+++.|+=| .||.| -.+|+++..++.
T Consensus       207 ~vi~i~S~SK-~~~l~GlRiG~~v~~~~~  234 (360)
T PRK07392        207 NLIILRSLTK-FYSLPGLRLGYAIAHPDR  234 (360)
T ss_pred             CEEEEEechh-hhcCCchheeeeeCCHHH
Confidence            1267789999 88744 248988876544

>PRK07505 hypothetical protein; Provisional

Probab=98.38  E-value=2.1e-05  Score=77.09  Aligned_cols=158  Identities=12%  Similarity=0.066  Sum_probs=92.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh----cCCCCCCC--EEEEc-cCcChHH-HHHHHHhCC
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE----SYPFFKGN--YYLTI-ISEESDY-IKGFAAQKE  192 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~----s~~~~~Gd--~Ils~-~eh~~~~-~~~la~~~G  192 (311)
                      +.......++.++.++++++.  +  .++|++| ++|+..++.    ++ +.+|+  .|+.. ..|.+.. ..... +.+
T Consensus        86 ~~~~~~~~~~l~~~la~~~~~--~--~~~~~sG-~~a~~~ai~~~~~~~-~~~~~~~vi~~~~~~H~s~~~~~~~~-~~~  158 (402)
T PRK07505         86 TRVRSQILKDLEEALSELFGA--S--VLTFTSC-SAAHLGILPLLASGH-LTGGVPPHMVFDKNAHASLNILKGIC-ADE  158 (402)
T ss_pred             hhhhhHHHHHHHHHHHHHhCC--C--EEEECCh-HHHHHHHHHHHHhcc-cCCCCCCEEEEchhhhHhHHhhhhhh-hcC
Confidence            334566778999999999987  3  2556655 556543332    22 22232  33333 3333211 12222 235


Q ss_pred             cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc---
Q 021539          193 SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---  267 (311)
Q Consensus       193 ~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---  267 (311)
                      .++..+|.+      |.++|++++++++    +.++.+ +.+.+|.+.|+++|.+ |+++|+++++|.+|+.+|..+   
T Consensus       159 ~~v~~~~~~------d~~~l~~~~~~~~----~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~  228 (402)
T PRK07505        159 TEVETIDHN------DLDALEDICKTNK----TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGE  228 (402)
T ss_pred             CeEEEeCCC------CHHHHHHHHhcCC----CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCC
Confidence            677777753      5678888886542    234433 3346899999999976 689999999999996511111   


Q ss_pred             -cC---CC--CCCCcEEEEccccCcCCCCCceEEEEE
Q 021539          268 -LA---LA--LHRPDLVLCTLDNNTHAQPLKITCLLV  298 (311)
Q Consensus       268 -ld---l~--~l~~Dfl~~S~HK~l~G~P~GiG~L~v  298 (311)
                       ..   +.  .-+..+++.|+=| .||.+ | |++.+
T Consensus       229 ~~~~~~~~~~~~d~~i~~~s~sK-~~~~~-G-g~~~~  262 (402)
T PRK07505        229 GYVRSELDYRLNERTIIAASLGK-AFGAS-G-GVIML  262 (402)
T ss_pred             chHHHHcCCCCCCCeEEEEechh-hhhcc-C-eEEEe
Confidence             11   11  1123466678999 77733 4 66554

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=98.38  E-value=5.4e-06  Score=79.73  Aligned_cols=166  Identities=12%  Similarity=0.091  Sum_probs=96.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-C----CCCEEEEcc-CcChH--HHHHHHHhCCcEE
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-F----KGNYYLTII-SEESD--YIKGFAAQKESKV  195 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-~----~Gd~Ils~~-eh~~~--~~~~la~~~G~~V  195 (311)
                      .....+..+++++++|.+    .++|+.|+++|+.+++.... + .    +++.|++.. ..|..  .............
T Consensus        68 ~~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~  143 (379)
T TIGR00707        68 TEPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK  143 (379)
T ss_pred             CHHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence            344568899999999873    39999999999987766431 1 1    257776432 33311  1111100000000


Q ss_pred             EEEeCCCCCccc----CHHHHHhhhhccCCCCCceEEEEecc--cccch-hc---HHHHHH-HHHCCcEEEeccccc-Cc
Q 021539          196 IAAPETWLDLRI----KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR-YS---MHWISE-AHRNAWHVLLDATGL-VF  263 (311)
Q Consensus       196 ~~vp~~~~~g~i----d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i-~P---i~~I~~-a~~~g~~vlvDAaQs-v~  263 (311)
                      ...+... +-..    +.+.|++.+.++     +++|.+...  .+|.+ .+   +++|.+ |+++|+++++|.++. + 
T Consensus       144 ~~~~~~~-~~~~~~~~d~~~l~~~~~~~-----~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~-  216 (379)
T TIGR00707       144 GFEPLVP-GFSYAPYNDIESLKKAIDDE-----TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGI-  216 (379)
T ss_pred             cCCCCCC-CceeeCCCCHHHHHHHhhhC-----eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC-
Confidence            0111111 1111    678888888654     456666544  35654 33   566654 688999999999997 4 


Q ss_pred             cCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          264 GED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       264 G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |..    +++.....+|+++|  .| .+|....+|+++.+++..+
T Consensus       217 ~~~g~~~~~~~~~~~~d~~t~--sK-~~~~G~riG~~~~~~~~~~  258 (379)
T TIGR00707       217 GRTGKFFAYEHYGIEPDIITL--AK-GLGGGVPIGATLAKEEVAE  258 (379)
T ss_pred             CccchhhhHHhcCCCCCEEEE--cc-cccCCcccEEEEEcHHHHh
Confidence            542    12222346787765  69 6663345999998876644

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK13578 ornithine decarboxylase; Provisional

Probab=98.36  E-value=8.8e-06  Score=86.09  Aligned_cols=170  Identities=12%  Similarity=0.081  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~  204 (311)
                      ..+.+|.+.+|+.+|++.   .-..|.|+|.|+..++.+. ..+||.|+..-.-|-+.......-.|+..++++...+ .
T Consensus       174 G~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~  249 (720)
T PRK13578        174 GAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF  249 (720)
T ss_pred             hHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence            345689999999999963   2556789999988888876 4789999865543423333211224888888764431 2


Q ss_pred             ---cccCHHH-----HHhhhhccC-C----CCCceEEEEecc-cccchhcHHHHHH-H-HHCCcEEEecccccCccCccc
Q 021539          205 ---LRIKGSQ-----LSQNFRRKC-K----YTPKGLFSYPVV-VNGTRYSMHWISE-A-HRNAWHVLLDATGLVFGEDQL  268 (311)
Q Consensus       205 ---g~id~~~-----L~~~l~~~~-~----~~~t~LVs~~~~-~tG~i~Pi~~I~~-a-~~~g~~vlvDAaQsv~G~~pl  268 (311)
                         |.|+.++     |++.|+... +    .++.+++.++.- --|+..++++|.+ + |..+ ++|+|-||..  |..+
T Consensus       250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga--h~~F  326 (720)
T PRK13578        250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG--YEQF  326 (720)
T ss_pred             CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh--hhcc
Confidence               3356544     888887541 1    012356665543 4799999999965 3 7777 9999998873  4322


Q ss_pred             C-----C----CCCCCc----EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          269 A-----L----ALHRPD----LVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       269 d-----l----~~l~~D----fl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      .     +    -++++|    |++-|.|| ++++-+....|-++.+.+
T Consensus       327 ~p~~~~~p~~al~~GaD~p~i~v~QStHK-tL~alTQaS~LHvk~~~i  373 (720)
T PRK13578        327 IPMMADCSPLLLELNENDPGIFVTQSVHK-QQAGFSQTSQIHKKDNHI  373 (720)
T ss_pred             CcccccCChhhhhcCCCCCCeEEEEChhh-cchhhhhHhhhhcCCccc
Confidence            1     1    135899    99999999 776677777887876543

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=98.34  E-value=1.4e-05  Score=79.13  Aligned_cols=156  Identities=14%  Similarity=0.105  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..++.-+++|+|+|.+.   -++|++|.+ |+..++.++. +++|.|++.---|.+.+ .-++..++++...+-      
T Consensus        85 ~h~~LE~~lA~f~g~e~---al~f~SGy~-AN~~~i~~l~-~~~dli~~D~lnHASii-dG~rls~a~~~~f~H------  152 (388)
T COG0156          85 LHVELEEELADFLGAEA---ALLFSSGFV-ANLGLLSALL-KKGDLIFSDELNHASII-DGIRLSRAEVRRFKH------  152 (388)
T ss_pred             HHHHHHHHHHHHhCCCc---EEEEcccch-hHHHHHHHhc-CCCcEEEEechhhhhHH-HHHHhCCCcEEEecC------
Confidence            34578888999999953   499999987 4455555663 56788876544443333 333445677666543      


Q ss_pred             cCHHHHHhhhhccCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCccc---------CCCCC
Q 021539          207 IKGSQLSQNFRRKCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL---------ALALH  273 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl---------dl~~l  273 (311)
                      .|.++|++.+++..... ...+|++..+  ..|.+-|+.+|.+ +++++++++||=||++ |..-=         .+..-
T Consensus       153 nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~-Gv~G~~GrG~~e~~g~~~~  231 (388)
T COG0156         153 NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAV-GVLGPNGRGLAEHFGLEPE  231 (388)
T ss_pred             CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccc-cccCCCCccHHHHhCCCCc
Confidence            25688999997621111 2467887777  3899999999966 5899999999999998 76542         23334


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEe
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      .+|+++.++-| -||   +.|+.+.-
T Consensus       232 ~vdi~~gTlsK-AlG---s~Gg~v~g  253 (388)
T COG0156         232 EVDIIVGTLGK-ALG---SSGGYIAG  253 (388)
T ss_pred             cceEEEEEchh-hhc---ccCceeeC
Confidence            56999999999 777   56766654

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.34  E-value=2.5e-07  Score=90.41  Aligned_cols=160  Identities=16%  Similarity=0.186  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChH-----HHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESD-----YIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~-----~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..+.+.++.+.||.  +  .+.+.|...|+.+++.++.  +|++|+...+|-.+     .+-..-+..|++++.|-..  
T Consensus        50 ~~v~~ll~~ltgAe--a--A~VvNnnaAAv~L~l~~la--~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--  121 (367)
T PF03841_consen   50 AHVEELLCELTGAE--A--ALVVNNNAAAVLLALNTLA--KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--  121 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc--c--ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc--
Confidence            35677788899984  2  5567777788888887764  56666533443311     1222233457766555432  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEec--c--cccc--hhcHHHHHH-HHHCCcEEEecccccCc--------cCccc
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--V--VNGT--RYSMHWISE-AHRNAWHVLLDATGLVF--------GEDQL  268 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~--~tG~--i~Pi~~I~~-a~~~g~~vlvDAaQsv~--------G~~pl  268 (311)
                      + +...++.++++.++     |.++-.-|  +  ..|.  -.|++++.+ +|++++++++|+...+.        +..|-
T Consensus       122 N-~t~~~Dye~AI~e~-----Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~  195 (367)
T PF03841_consen  122 N-RTHLSDYEKAITEN-----TAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPT  195 (367)
T ss_dssp             ---------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-------
T ss_pred             c-cccccccccccccc-----ccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccH
Confidence            1 34567788999876     34443322  2  2342  247788865 69999999999987210        11111


Q ss_pred             --CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          269 --ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       269 --dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                        +.-+.++|.++||+.| ++|+|+ .|+++-|+++++
T Consensus       196 v~~~~~~GaDlV~fSGdK-lLGGPQ-aGiI~Gkk~lI~  231 (367)
T PF03841_consen  196 VQEYLAAGADLVTFSGDK-LLGGPQ-AGIIVGKKELIE  231 (367)
T ss_dssp             ---CCCCT-SEEEEETTS-SSSS-S--EEEEEEHHHHH
T ss_pred             HHHHhhcCCCEEEEECCC-cCCCCC-eEEEEeCHHHHH
Confidence              1223689999999999 999898 699999987765

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=98.30  E-value=1.7e-05  Score=79.98  Aligned_cols=162  Identities=14%  Similarity=0.088  Sum_probs=107.9

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ..|+.|++++    |...+..+|++|+|+++|+++++..+. .+||.|+.. ..++  .+....+..|+++..||+|. +
T Consensus       136 ~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~-~pGd~v~vE~PtY~--~~~~~~~~~g~~~~~vp~d~-~  211 (459)
T COG1167         136 ELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL-DPGDTVLVEDPTYP--GALQALEALGARVIPVPVDE-D  211 (459)
T ss_pred             HHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC-CCCCEEEEcCCCcH--HHHHHHHHcCCcEEecCCCC-C
Confidence            4555555444    443333369999999999999999874 589998632 2222  23445566799999999985 5


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEE-e-cc-cccchhcHHH---H-HHHHHCCcEEEecccccCc---cCcccCCCC--
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYSMHW---I-SEAHRNAWHVLLDATGLVF---GEDQLALAL--  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~Pi~~---I-~~a~~~g~~vlvDAaQsv~---G~~pldl~~--  272 (311)
                      | ++++.|++.++..    +.+++-+ + ++ =||..++.+.   | ..|++++++++=|-.=+-.   +.-+.++..  
T Consensus       212 G-~~~e~le~~~~~~----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld  286 (459)
T COG1167         212 G-IDPEALEEALAQW----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD  286 (459)
T ss_pred             C-CCHHHHHHHHhhc----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhC
Confidence            5 7899999998753    1345544 3 23 3999999974   4 3468999999998865431   111111222  


Q ss_pred             -CCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539          273 -HRPDLVLCTLDNNTHAQPL-KITCLLVRRKS  302 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~  302 (311)
                       .+==+++.|+=| .+. |. .+|.+++.+++
T Consensus       287 ~~~rViy~gSFSK-~l~-PglRlG~vv~p~~~  316 (459)
T COG1167         287 APGRVIYLGSFSK-TLA-PGLRLGYVVAPPEL  316 (459)
T ss_pred             CCCCEEEEeeehh-hcc-cccceeeeeCCHHH
Confidence             244589999999 666 53 68888877554

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=98.30  E-value=6.4e-06  Score=82.65  Aligned_cols=165  Identities=9%  Similarity=0.058  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEe
Q 021539          129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      .+.|+.||++++        ++++  +|++|+|+|+|+.+++..+ ..+||.|+... .+. .....+..+.|++++.++
T Consensus        98 ~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~-~f~~~~~~~~g~~vv~v~  173 (447)
T PLN02607         98 KSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYP-GFDRDLRWRTGVKIVPIH  173 (447)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCc-chHHHHHhcCCcEEEEEe
Confidence            368888888875        4444  5999999999999998887 36899886322 222 111222224588888888


Q ss_pred             CCCCC-cccCHHHHHhhhhccC-CCCCceEEEE--ecccccchhcHHHHH----HHHHCCcEEEecccccCc--cCcc-c
Q 021539          200 ETWLD-LRIKGSQLSQNFRRKC-KYTPKGLFSY--PVVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVF--GEDQ-L  268 (311)
Q Consensus       200 ~~~~~-g~id~~~L~~~l~~~~-~~~~t~LVs~--~~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~--G~~p-l  268 (311)
                      .+..+ ..++.+.++++++... ...+++++.+  +++=+|..+|-+++.    .|+++++++++|-+-+..  +..+ .
T Consensus       174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~  253 (447)
T PLN02607        174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFV  253 (447)
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcc
Confidence            76432 2478899988886410 0112444443  344699999976553    357899999999986530  2111 1


Q ss_pred             CCC----CCC----Cc--EEEEccccCcCCCCCc--eEEEEEe
Q 021539          269 ALA----LHR----PD--LVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       269 dl~----~l~----~D--fl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      .+.    ..+    .+  .++-|.=| -||.| |  +|+++..
T Consensus       254 S~~s~~~~~~~~~~~~~v~vi~s~SK-~fg~~-GlRvG~ivs~  294 (447)
T PLN02607        254 SVAEIVEARGYKGVAERVHIVYSLSK-DLGLP-GFRVGTIYSY  294 (447)
T ss_pred             cHHHHHhhcCCCCCcCcEEEEEcchh-cCCCC-cceEEEEEEc
Confidence            111    111    12  46678899 88744 5  7999974

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=98.27  E-value=1.8e-05  Score=77.46  Aligned_cols=161  Identities=12%  Similarity=0.079  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-------CCC-CEEEEc-cCcChH--HHHHHHHh---
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-------FKG-NYYLTI-ISEESD--YIKGFAAQ---  190 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-------~~G-d~Ils~-~eh~~~--~~~~la~~---  190 (311)
                      ....+.-++++++++.  +  .+.|++++|||+..++... .+       .+| +.|++. ...|..  ....+...   
T Consensus        82 ~~~~~l~~~l~~~~~~--~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~  157 (396)
T PRK04073         82 DQLGPWYEKVAKLTGK--D--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY  157 (396)
T ss_pred             HHHHHHHHHHHhcCCC--C--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence            3444566777777764  2  4999999999987654422 11       123 456543 344421  11111110   


Q ss_pred             -CCc-----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          191 -KES-----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       191 -~G~-----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                       .+.     .+..+|.+      +.++|++.++++     +++|.+...  .+|.+.|    +++|.+ |+++|+++++|
T Consensus       158 ~~~~~~~~~~~~~~~~~------d~~~l~~~i~~~-----~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D  226 (396)
T PRK04073        158 KRGFGPMLPGIKKIPYG------DLEALKAAITPN-----TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD  226 (396)
T ss_pred             ccCCCCCCCCceEeCCC------CHHHHHHhcccC-----eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence             011     12233322      567888888654     466666443  5899988    677865 68999999999


Q ss_pred             ccccCccCc----ccCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          258 ATGLVFGED----QLALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv~G~~----pldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      -+|.-.|..    ..+.....+|++++|  | -+|++ --+|+++.++++.+
T Consensus       227 Ev~~g~g~~g~~~~~~~~~~~pdi~~~s--K-~lg~gg~~ig~~~~~~~i~~  275 (396)
T PRK04073        227 EIQTGLGRTGKLFACDWDNVTPDMYILG--K-ALGGGVFPISCVAANRDILG  275 (396)
T ss_pred             cchhCCCcCcHHHHhhhcCCCCCEEEec--c-cccCCCCcceEEEEcHHHHh
Confidence            999921532    224445579999886  9 55543 23899998876544

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=98.26  E-value=1.4e-05  Score=78.38  Aligned_cols=158  Identities=12%  Similarity=0.037  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHc---CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCc-----------
Q 021539          129 IQARNRALKHC---GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKES-----------  193 (311)
Q Consensus       129 e~aR~~IA~~L---ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~-----------  193 (311)
                      .+.|+.||+++   ++++++  |++|+|+++++.++.. + +.+|+.|+.. -.+. . ....++..|.           
T Consensus        78 ~~lr~aia~~~~~~~~~~d~--I~it~Ga~~al~~l~~-l-~~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~~~~~~~~  151 (402)
T TIGR03542        78 PFLREAIAENDYRGRIDPEE--IFISDGAKCDVFRLQS-L-FGSDNTVAVQDPVYP-A-YVDSNVMAGRAGVLDDDGRYS  151 (402)
T ss_pred             HHHHHHHHHHHHhcCCCHHH--EEECCCcHHHHHHHHH-h-cCCCCEEEEeCCCCc-c-hHHHHHHcCCccccccccccc
Confidence            47889999876   677665  9999999999998754 3 3578887532 2222 1 2233445577           


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---c
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---G  264 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---G  264 (311)
                      ++..+|.+..++ +..+ +.+  ..+     +++|.++  ++=||+.++.++   |.+ |+++++++++|-+..-.   +
T Consensus       152 ~~~~v~~~~~~~-~~~~-~~~--~~~-----~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~  222 (402)
T TIGR03542       152 KITYLPCTKENN-FIPD-LPE--EPK-----IDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDP  222 (402)
T ss_pred             eEEEeecchhhC-CCCC-ccc--cCC-----ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCC
Confidence            888888753211 2222 111  011     3455443  225999999554   433 58899999999987631   1


Q ss_pred             CcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          265 EDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       265 ~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ..+..+..+    +.-+++.|+=| .||.| |  +|+++..++..
T Consensus       223 ~~~~~~~~~~~~~~~vi~~~SfSK-~~g~p-GlRiG~~i~~~~l~  265 (402)
T TIGR03542       223 SLPHSIFEIPGAKECAIEFRSFSK-TAGFT-GVRLGWTVVPKELT  265 (402)
T ss_pred             CCCcchhhCCCCcccEEEEecCcc-ccCCC-CcceEEEEecHHHh
Confidence            112233222    12366788899 88844 6  79998876543

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=98.23  E-value=1.2e-05  Score=81.09  Aligned_cols=167  Identities=8%  Similarity=0.065  Sum_probs=105.3

Q ss_pred             HHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeC
Q 021539          130 QARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       130 ~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.|+.||++++        +++++  |+.|+|+++++.+++..+. .+||.|+... .+. .....+....|++++.+|.
T Consensus        90 ~LR~aiA~~l~~~~~~~~~v~~~~--Iiit~Ga~~al~~l~~~l~-~pGd~Vlv~~P~Y~-~~~~~~~~~~g~~~v~v~~  165 (468)
T PLN02450         90 AFKNALAEFMSEIRGNKVTFDPNK--LVLTAGATSANETLMFCLA-EPGDAFLLPTPYYP-GFDRDLKWRTGVEIVPIHC  165 (468)
T ss_pred             HHHHHHHHHHHHhhCCCCCcChHH--eEEccChHHHHHHHHHHhC-CCCCEEEECCCCCC-chHHHHhhcCCcEEEEEec
Confidence            57888888885        45554  9999999999999999873 6899886432 222 1112222246899988987


Q ss_pred             CC-CCcccCHHHHHhhhhccC-CCCCceEEEE--ecccccchhcHHHHHH----HHHCCcEEEecccccC---ccCcccC
Q 021539          201 TW-LDLRIKGSQLSQNFRRKC-KYTPKGLFSY--PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLV---FGEDQLA  269 (311)
Q Consensus       201 ~~-~~g~id~~~L~~~l~~~~-~~~~t~LVs~--~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv---~G~~pld  269 (311)
                      +. .+..++.+.+++.+++.. ...+++++.+  +++=||..+|.+++.+    |+++++++++|=+-+.   .+.....
T Consensus       166 ~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s  245 (468)
T PLN02450        166 SSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVS  245 (468)
T ss_pred             CCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCccc
Confidence            53 234567788888775410 0012344333  3335999999887632    5789999999988652   0111111


Q ss_pred             ---CC---------CCCCcEEEEccccCcCCCC-CceEEEEEeCC
Q 021539          270 ---LA---------LHRPDLVLCTLDNNTHAQP-LKITCLLVRRK  301 (311)
Q Consensus       270 ---l~---------~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~  301 (311)
                         +.         ..+-=+++-|+=| .||.| -.+|+++..++
T Consensus       246 ~l~~~~~~~~~~~~~~~~vi~l~S~SK-~~~l~GlRiG~li~~~~  289 (468)
T PLN02450        246 VMEVLKDRKLENTDVSNRVHIVYSLSK-DLGLPGFRVGAIYSNDE  289 (468)
T ss_pred             HHHHhhhcccccCCCCCcEEEEEeccc-cCCCCCccEEEEEECCH
Confidence               10         0111267889999 77633 14999988654

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=98.23  E-value=4e-05  Score=75.90  Aligned_cols=159  Identities=14%  Similarity=0.121  Sum_probs=103.7

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++    |  .+++ .+|+.|.|+++|+..+..++ ..+||+|+.. -....  ...+.+-.|.++..+|.+.
T Consensus        69 ~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~al~~~~~a~-~~pGDeVlip~P~Y~~--y~~~~~~~gg~~v~v~l~~  144 (393)
T COG0436          69 ELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKEALFLAFLAL-LNPGDEVLIPDPGYPS--YEAAVKLAGGKPVPVPLDE  144 (393)
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcC--HHHHHHhcCCEEEEEeCCc
Confidence            5666666544    3  2332 25999999999999998887 5789997632 22221  1223344589999998642


Q ss_pred             --CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          203 --LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       203 --~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                        .+-.++.++|++.++++     |+++.+  +++=||.+++-+++.   + |++++++++.|-+=.-.   |..+..+.
T Consensus       145 ~~~~f~~d~~~l~~~i~~k-----tk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~  219 (393)
T COG0436         145 EENGFKPDLEDLEAAITPK-----TKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSIL  219 (393)
T ss_pred             CccCCcCCHHHHHhhcCcc-----ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHh
Confidence              25578999999999886     455544  555699999977663   3 58899999999762210   11122222


Q ss_pred             CCC----CcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          272 LHR----PDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       272 ~l~----~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      +..    .=+.+-|+=| -|| -+|  +|.++..
T Consensus       220 ~~~~~~~~~i~i~s~SK-~~~-mtGwRvG~~v~~  251 (393)
T COG0436         220 ELAGARDRTITINSFSK-TYG-MTGWRIGWVVGP  251 (393)
T ss_pred             hcCCCcceEEEEecccc-ccc-ccccceeEeecC
Confidence            222    2345558899 777 445  8999877

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=98.21  E-value=3.6e-05  Score=73.53  Aligned_cols=148  Identities=13%  Similarity=0.065  Sum_probs=96.4

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      +.|+.||++++.  ++  |++|+|+++++.++..   ..+||.|+.. -.+  ......++..|+++..+|.+       
T Consensus        53 ~Lr~~ia~~~~~--~~--I~it~Gs~~al~~~~~---~~~gd~v~v~~P~y--~~~~~~~~~~g~~~~~v~~~-------  116 (330)
T PRK05664         53 GLEAAARAYYGA--PQ--LLPVAGSQAAIQALPR---LRAPGRVGVLSPCY--AEHAHAWRRAGHQVRELDEA-------  116 (330)
T ss_pred             HHHHHHHHHhCC--CC--EEECcCHHHHHHHHHH---ccCCCEEEEcCCCh--HHHHHHHHHcCCeEEEechh-------
Confidence            679999999986  33  9999999999998864   2578987632 121  12344456679999888763       


Q ss_pred             HHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCCC--C-cEEEE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALHR--P-DLVLC  280 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l~--~-Dfl~~  280 (311)
                        ++++.+++ +    ..++.+ +.+=||.++|.+++.+    ++++++++++|=+-.- ......+..+.  . =+++-
T Consensus       117 --~~~~~~~~-~----~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~-~~~~~s~~~~~~~~~vi~~~  188 (330)
T PRK05664        117 --EVEAALDS-L----DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMD-NTPQHSLAACAHRPGLIVLR  188 (330)
T ss_pred             --hHhhhhcC-C----CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCccc-CCCcccccccccCCCEEEEe
Confidence              23344432 2    223333 4445999999877633    4678999999987643 22111222221  1 27899


Q ss_pred             ccccCcCCCCCc--eEEEEEeCCCC
Q 021539          281 TLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       281 S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      |+-| .||.| |  +|.++..+++.
T Consensus       189 SfSK-~~gl~-GlRiG~~v~~~~l~  211 (330)
T PRK05664        189 SFGK-FFGLA-GARLGFVLAEPALL  211 (330)
T ss_pred             eccc-cccCC-CcceEEEEeCHHHH
Confidence            9999 88844 6  89998876543

>PLN02368 alanine transaminase

Probab=98.21  E-value=1.6e-05  Score=78.84  Aligned_cols=163  Identities=10%  Similarity=-0.034  Sum_probs=103.2

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++    |  ++++  +|++|+|+++++.+++..+...+||.|+.. -.+. . ....++..|.+++.+|.+.
T Consensus       111 ~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~-~-y~~~~~~~g~~~v~v~~~~  186 (407)
T PLN02368        111 GVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYP-L-YSATISLLGGTLVPYYLEE  186 (407)
T ss_pred             HHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCc-c-HHHHHHHcCCEEEEEeccc
Confidence            6788888877    6  4444  599999999999999887743589988632 2222 1 2233455688998898764


Q ss_pred             C-CcccCHHHHHhhhhccC-CCCCceEEE--EecccccchhcHHHHHH----HHHCCcEEEecccccCc---cCcc-cCC
Q 021539          203 L-DLRIKGSQLSQNFRRKC-KYTPKGLFS--YPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GEDQ-LAL  270 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~-~~~~t~LVs--~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~p-ldl  270 (311)
                      . +-.++.+.|++.+++.. +..+++++.  .+++=||.+++.+++.+    |++++++++.|-+-.-.   +..+ ..+
T Consensus       187 ~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~  266 (407)
T PLN02368        187 SENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISA  266 (407)
T ss_pred             ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccH
Confidence            2 23578999998886410 001244333  24456999999887633    57899999999875321   1111 111


Q ss_pred             C----CCC-------CcEEEEccccCcC-CCCCc--eEEEEE
Q 021539          271 A----LHR-------PDLVLCTLDNNTH-AQPLK--ITCLLV  298 (311)
Q Consensus       271 ~----~l~-------~Dfl~~S~HK~l~-G~P~G--iG~L~v  298 (311)
                      .    .+.       -=+++.|+-| .| |.| |  +|.+++
T Consensus       267 ~~~~~~~~~~~~~~~~vI~~~SfSK-~~~~~~-GlRiGy~i~  306 (407)
T PLN02368        267 KKVLMDMGPPISKEVQLVSFHTVSK-GYWGEC-GQRGGYFEM  306 (407)
T ss_pred             HHHHhhhcccccccceEEEEecCCc-ccccCC-ccceEEEEE
Confidence            1    111       2266788999 65 533 5  788874

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=98.21  E-value=2.7e-06  Score=81.21  Aligned_cols=162  Identities=14%  Similarity=0.146  Sum_probs=107.4

Q ss_pred             HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHH--HHHhCCcEEEEEeCCCCCcccC
Q 021539          131 ARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKG--FAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       131 aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~--la~~~G~~V~~vp~~~~~g~id  208 (311)
                      ..+++|+++|-..    -.|++++|.++.+.+..--..+|..|+.....|...+..  ++.-.|+.+..+.... ||.++
T Consensus        61 LE~~vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~-dgtm~  135 (384)
T KOG1368|consen   61 LEQRVAELFGKEA----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN-DGTMD  135 (384)
T ss_pred             HHHHHHHHhCccc----eeeecccccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCC-CCeee
Confidence            3456899999642    689999999988877754445787776444333111110  1122367777766543 89999


Q ss_pred             HHHHHhhhhcc---CCCCCceEEEEe--cc-cccchhcHHHHHH----HHHCCcEEEecccccCccC--cccCCCC--CC
Q 021539          209 GSQLSQNFRRK---CKYTPKGLFSYP--VV-VNGTRYSMHWISE----AHRNAWHVLLDATGLVFGE--DQLALAL--HR  274 (311)
Q Consensus       209 ~~~L~~~l~~~---~~~~~t~LVs~~--~~-~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~--~pldl~~--l~  274 (311)
                      +++|++.++.+   +...+|+|+|+-  +. +-|..+|++|+.+    ++++|..+|+|++-.+-..  ..+.++.  ..
T Consensus       136 ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~  215 (384)
T KOG1368|consen  136 LEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSA  215 (384)
T ss_pred             HHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHh
Confidence            99999999842   333468999984  44 3459999998733    5889999999998654111  2223333  24


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      .|.+.+.+-| =+|+|-  |-++|-+
T Consensus       216 fDSVsiCLSK-glgAPV--GSViVG~  238 (384)
T KOG1368|consen  216 FDSVSICLSK-GLGAPV--GSVIVGS  238 (384)
T ss_pred             hhhhhhhhhc-cCCCCc--ccEEEcc
Confidence            7999999999 555584  4455543

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=98.20  E-value=3.2e-05  Score=75.55  Aligned_cols=162  Identities=12%  Similarity=0.026  Sum_probs=102.0

Q ss_pred             HHHHHHHHHHcC------CCCCCCeE--EEeCCHHHHHHHHHhcCC-CCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEE
Q 021539          129 IQARNRALKHCG------LSEDEYLV--LFVPNYKEAMLMIGESYP-FFKGNYYLTII-SEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~V--vFTsnaTealnlv~~s~~-~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~v  198 (311)
                      .+.|+.||+++.      ++++  +|  +.|+|+++|+.++++.+. ..+||.|+... .+. . ....++..|++++.+
T Consensus        72 ~~lR~aia~~~~~~~~~~~~~~--~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~-~-~~~~~~~~g~~~v~v  147 (396)
T PRK09257         72 AAYRQAVQELLFGADSPALAAG--RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWP-N-HRAIFEAAGLEVKTY  147 (396)
T ss_pred             HHHHHHHHHHhcCCCCcccccC--eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcc-c-HHHHHHHcCCcEEEE
Confidence            368888888763      1333  35  999999999999987654 36899886322 211 1 233445579999999


Q ss_pred             eC-CCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCc----c
Q 021539          199 PE-TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED----Q  267 (311)
Q Consensus       199 p~-~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~----p  267 (311)
                      |. +.++..++.+.+++.++...  .++.++.++  ++=||..++-++.   .+ |++++++++.|-+=.-....    .
T Consensus       148 ~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~  225 (396)
T PRK09257        148 PYYDAATKGLDFDAMLADLSQAP--AGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDA  225 (396)
T ss_pred             eccccccCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHH
Confidence            86 22234689999988876321  113444433  3359999998765   33 57899999998763210110    0


Q ss_pred             cC---CCCC-CCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          268 LA---LALH-RPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       268 ld---l~~l-~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      ..   +... .-=+++.|+=| .|| |.|  +|++++
T Consensus       226 ~~~~~~~~~~~~vi~i~SfSK-~~~-~~GlRiG~~~~  260 (396)
T PRK09257        226 YGLRAFAAAGLELLVASSFSK-NFG-LYGERVGALSV  260 (396)
T ss_pred             HHHHHHHhcCCcEEEEEEcCC-cCc-cccccceeEEE
Confidence            01   1111 12377899999 888 655  788874

>PRK05839 hypothetical protein; Provisional

Probab=98.18  E-value=4.9e-05  Score=73.87  Aligned_cols=160  Identities=13%  Similarity=0.065  Sum_probs=95.8

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.+|+++    |  ++++  +|++|+|+++++.++...+.. .+|+.|+.. -.+. . ....++..|+++..+|.+
T Consensus        64 ~lr~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~-~-~~~~~~~~g~~v~~v~~~  139 (374)
T PRK05839         64 SLREAQRGFFKRRFKIELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQ-I-YEGAAIASRAKVLLMPLT  139 (374)
T ss_pred             HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCch-h-hHHHHHhcCCEEEEeecc
Confidence            4666666554    6  4554  599999999999988776533 467887532 1211 1 223345679999999986


Q ss_pred             CCC-cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH----HHHHCCcEEEecccccCc-cCccc-CC-C
Q 021539          202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS----EAHRNAWHVLLDATGLVF-GEDQL-AL-A  271 (311)
Q Consensus       202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~-G~~pl-dl-~  271 (311)
                      ..+ ..++...  ..++ +     ++++.++  ++=||+++|.+++.    .|+++|+++++|-+-+-. ...+. .+ .
T Consensus       140 ~~~~~~~d~~~--~~~~-~-----~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~  211 (374)
T PRK05839        140 KENDFTPSLNE--KELQ-E-----VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLE  211 (374)
T ss_pred             cccCCcCCcch--hhhc-c-----ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhh
Confidence            422 2333322  2222 2     3455443  33599999987663    257899999999875420 11111 11 0


Q ss_pred             --------CCCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539          272 --------LHRPDLVLCTLDNNTHAQPL-KITCLLVRRKS  302 (311)
Q Consensus       272 --------~l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~  302 (311)
                              ..+-=+++.|+=| .||.|- .+|+++..++.
T Consensus       212 ~~~~~~~~~~~~vi~~~SfSK-~~~~~GlRiG~ii~~~~~  250 (374)
T PRK05839        212 ASILVGNESFKNVLVINSISK-RSSAPGLRSGFIAGDASI  250 (374)
T ss_pred             hhcccCccccCcEEEEecccc-ccCCccceeEEEecCHHH
Confidence                    1112277899999 777452 38988876544

>PRK08354 putative aminotransferase; Provisional

Probab=98.15  E-value=9.9e-05  Score=69.87  Aligned_cols=148  Identities=14%  Similarity=0.129  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      ...|+.+|+++|.   +  |++|+|+++++.+++..+  .+|+.|+...=... .....++..|.++..++       ++
T Consensus        43 ~~l~~~ia~~~~~---~--I~vt~G~~~al~~~~~~~--~~gd~vlv~~P~y~-~~~~~~~~~g~~~~~~~-------~d  107 (311)
T PRK08354         43 EWLEEEFSKLFGE---P--IVITAGITEALYLIGILA--LRDRKVIIPRHTYG-EYERVARFFAARIIKGP-------ND  107 (311)
T ss_pred             HHHHHHHHHHHCC---C--EEECCCHHHHHHHHHHhh--CCCCeEEEeCCCcH-HHHHHHHHcCCEEeecC-------CC
Confidence            3678999999983   3  999999999999887544  37888863321111 23344556788886543       35


Q ss_pred             HHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcccc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDN  284 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK  284 (311)
                      .+.|++.+++ +   ..-+++.+++-||..++.+++.+    ++++|+++++|-+-.-.....-... ..--+++-|+=|
T Consensus       108 ~~~l~~~~~~-~---~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~-~~~vi~~~S~SK  182 (311)
T PRK08354        108 PEKLEELVER-N---SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPE-GENIIKLRTFTK  182 (311)
T ss_pred             HHHHHHhhcC-C---CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccC-CCcEEEEeccHh
Confidence            6777777653 1   12223334446999999876633    4678999999998632011111111 233478889999


Q ss_pred             CcCCCCCc--eEEEEE
Q 021539          285 NTHAQPLK--ITCLLV  298 (311)
Q Consensus       285 ~l~G~P~G--iG~L~v  298 (311)
                       .||.| |  +|+++.
T Consensus       183 -~~~l~-GlRiG~~v~  196 (311)
T PRK08354        183 -SYGLP-GIRVGYVKG  196 (311)
T ss_pred             -hcCCc-cceeeeeee
Confidence             88845 6  688775

>PLN02231 alanine transaminase

Probab=98.14  E-value=4.8e-05  Score=78.22  Aligned_cols=169  Identities=11%  Similarity=-0.001  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          128 EIQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       128 le~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.+.|+.||+++    |.+.+..+|++|+|+++|+.+++..+.-.+||.|+... .+. .. ...++..|.++..++.+.
T Consensus       170 ~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~-~y-~~~~~~~g~~~v~~~l~~  247 (534)
T PLN02231        170 IKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYP-LY-SASIALHGGTLVPYYLDE  247 (534)
T ss_pred             cHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCCh-hH-HHHHHHcCCEEEEEecCc
Confidence            457888899887    43223335999999999999999987424688886332 222 11 222345688998888864


Q ss_pred             CC-cccCHHHHHhhhhccCCC-CCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc----cCcccCC
Q 021539          203 LD-LRIKGSQLSQNFRRKCKY-TPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF----GEDQLAL  270 (311)
Q Consensus       203 ~~-g~id~~~L~~~l~~~~~~-~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~----G~~pldl  270 (311)
                      ++ -.++.++|++.+++...+ .+++++.+  +++=||.+++.+++.   + |+++|++++.|-+-.-.    +.....+
T Consensus       248 ~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~  327 (534)
T PLN02231        248 ATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSF  327 (534)
T ss_pred             ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccH
Confidence            32 357899999888652111 12444333  344599999987653   2 58899999999764420    1111122


Q ss_pred             CCC---------CCcEE-EEccccCcCCCC-CceEEEEE
Q 021539          271 ALH---------RPDLV-LCTLDNNTHAQP-LKITCLLV  298 (311)
Q Consensus       271 ~~l---------~~Dfl-~~S~HK~l~G~P-~GiG~L~v  298 (311)
                      ..+         ++..+ .-|+=|.++|-| ..+|.+.+
T Consensus       328 ~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~  366 (534)
T PLN02231        328 KKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV  366 (534)
T ss_pred             HHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence            111         12234 448899555522 24788876

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=98.14  E-value=2.9e-05  Score=76.29  Aligned_cols=165  Identities=15%  Similarity=0.050  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHcCCCCC----CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCC-
Q 021539          128 EIQARNRALKHCGLSED----EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPET-  201 (311)
Q Consensus       128 le~aR~~IA~~Lga~~d----ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~-  201 (311)
                      +..||+.||+.++-+.+    ..+|+.|+|.++|+.+++.++. ++|.+|+.+. +.+...  .++...|.+|+...+- 
T Consensus       105 ~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNILlPrPGfp~Y~--~~a~~~~lEVR~ydlLP  181 (447)
T KOG0259|consen  105 ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANILLPRPGFPLYD--TRAIYSGLEVRYYDLLP  181 (447)
T ss_pred             cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCceecCCCCCchHH--HhhhhcCceeEeecccC
Confidence            45799999999875321    2249999999999999999987 7888886442 333222  2355678998875421 


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe-cccccchhcH---HHHHH-HHHCCcEEEeccc--ccCccCcc-cCCCC-
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VVVNGTRYSM---HWISE-AHRNAWHVLLDAT--GLVFGEDQ-LALAL-  272 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~~tG~i~Pi---~~I~~-a~~~g~~vlvDAa--Qsv~G~~p-ldl~~-  272 (311)
                      ..+=+||++.++.+++++|    ..||.+. .+-+|.++.-   ++|++ |++.|+.++.|=+  |.+.|-.| +.|.. 
T Consensus       182 e~~weIDL~~veal~DENT----~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~f  257 (447)
T KOG0259|consen  182 EKDWEIDLDGVEALADENT----VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKF  257 (447)
T ss_pred             cccceechHHHHHhhccCe----eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhc
Confidence            1245799999999999875    5677763 4457887774   56655 6999999999975  22223333 23333 


Q ss_pred             --CCCcEEEEccccCcCCCCC-ceEEEEEeC
Q 021539          273 --HRPDLVLCTLDNNTHAQPL-KITCLLVRR  300 (311)
Q Consensus       273 --l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~  300 (311)
                        .-|=.-+.+.-|.|+= |- .+|-+.+.+
T Consensus       258 ssiVPVitlggisKrW~V-PGWRlGWi~~hD  287 (447)
T KOG0259|consen  258 SSIVPVITLGGISKRWIV-PGWRLGWIALHD  287 (447)
T ss_pred             cccCceEeeccccccccc-CCceeeeEEEec
Confidence              2233445566787775 62 488887765

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=98.12  E-value=4.5e-05  Score=73.90  Aligned_cols=163  Identities=15%  Similarity=0.128  Sum_probs=92.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C--C---CCCEEEE-ccCcChHHHHHHHHhCCcEE--
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F--F---KGNYYLT-IISEESDYIKGFAAQKESKV--  195 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~--~---~Gd~Ils-~~eh~~~~~~~la~~~G~~V--  195 (311)
                      ....++..+.++++.+.  +  .|+||+|++||+..++.... +  +   ..+.|++ ....|......+.. .+...  
T Consensus        80 ~~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~-~~~~~~~  154 (396)
T PRK02627         80 IEPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSA-TGQPKYQ  154 (396)
T ss_pred             CHHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHh-cCCcccc
Confidence            33445666777777665  3  49999999999988877321 1  1   1145543 33333111111110 11111  


Q ss_pred             -EEEeCCCCCccc------CHHHHHhhhhccCCCCCceEEEEec-c-cccc-hhc---HHHHHH-HHHCCcEEEeccccc
Q 021539          196 -IAAPETWLDLRI------KGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGT-RYS---MHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       196 -~~vp~~~~~g~i------d~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~-i~P---i~~I~~-a~~~g~~vlvDAaQs  261 (311)
                       ...|..  . .+      +.++|++++.++     +++|.+.. + .+|. ..|   +++|.+ |+++|+++++|-+++
T Consensus       155 ~~~~~~~--~-~~~~~~~~d~~~l~~~i~~~-----~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~  226 (396)
T PRK02627        155 EGFEPLV--E-GFIYVPFNDIEALKAAITDK-----TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT  226 (396)
T ss_pred             ccCCCCC--C-CceEeCCCCHHHHHHhcCCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc
Confidence             111111  1 12      678888888643     46666543 3 4663 444   556654 689999999999998


Q ss_pred             -CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          262 -VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       262 -v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                       + |..    .++.....+|+++||  | -+|..-.+|+++.+++..+
T Consensus       227 g~-g~~g~~~~~~~~~~~pdi~t~s--K-~~~~G~rig~~~~~~~~~~  270 (396)
T PRK02627        227 GM-GRTGKLFAYQHYGIEPDIMTLA--K-GLGGGVPIGAVLAKEKVAD  270 (396)
T ss_pred             CC-CccCceeeehhcCCCCCEEEEc--c-hhhCCcccEEEEEcHHHHh
Confidence             4 532    122233468988876  9 6662123899998876543

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=98.11  E-value=3.6e-05  Score=73.91  Aligned_cols=154  Identities=18%  Similarity=0.177  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHcC---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcCh-HHHHHHHHhCCcEEEEEeCCCC
Q 021539          128 EIQARNRALKHCG---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEES-DYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       128 le~aR~~IA~~Lg---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~-~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..+.|+.||++++   +++++  |++|+|+++++.++...+     +.|+..  .+. ......++..|.++..+|.+. 
T Consensus        58 ~~~Lr~aia~~~~~~~~~~~~--i~it~Ga~~~i~~~~~~~-----d~v~v~--~P~y~~~~~~~~~~g~~~~~v~~~~-  127 (335)
T PRK14808         58 DEELIEKILSYLDTDFLSKNN--VSVGNGADEIIYVMMLMF-----DRSVFF--PPTYSCYRIFAKAVGAKFLEVPLTK-  127 (335)
T ss_pred             hHHHHHHHHHHhCCCCCCcce--EEEcCCHHHHHHHHHHHh-----CcEEEC--CCCHHHHHHHHHHcCCeEEEecCCC-
Confidence            3479999999999   76655  999999999999998877     345422  121 123445666799999999864 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCc-cCcccC-CCCCCCcEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVF-GEDQLA-LALHRPDLVL  279 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~-G~~pld-l~~l~~Dfl~  279 (311)
                      ++.++...    +++      ++++.++  ++=||..++.+++.++-++++++++|-+-.-. +....+ +....-=+++
T Consensus       128 ~~~~~~~~----~~~------~~~i~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~  197 (335)
T PRK14808        128 DLRIPEVN----VGE------GDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVI  197 (335)
T ss_pred             cCCCChhH----ccC------CCEEEEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEE
Confidence            44444321    221      2454443  33599999999987754689999999975410 211112 1122223777


Q ss_pred             EccccCcCCCCCc--eEEEEEeCCCC
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .|+=| .||. .|  +|+++..+++.
T Consensus       198 ~S~SK-~~~l-~GlRvG~~v~~~~~~  221 (335)
T PRK14808        198 RTFSK-AFSL-AAQRIGYVVSSEKFI  221 (335)
T ss_pred             Eechh-hccC-cccceEEEEeCHHHH
Confidence            89999 8883 36  79999876543

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=98.09  E-value=6.3e-05  Score=73.24  Aligned_cols=162  Identities=13%  Similarity=0.106  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCCCCCC----EEEEc-cCcChHHHHHHHHhCCcEEEE-
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPFFKGN----YYLTI-ISEESDYIKGFAAQKESKVIA-  197 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~~~Gd----~Ils~-~eh~~~~~~~la~~~G~~V~~-  197 (311)
                      ...+.-++++++.+.  +  .|+||+|+|||+..++..   +...+|+    +|++. ..+|......+. ..+..... 
T Consensus        74 ~~~~la~~l~~~~~~--~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~-~~~~~~~~~  148 (389)
T PRK01278         74 EQERLAERLVENSFA--D--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIA-AGGQEKYLE  148 (389)
T ss_pred             HHHHHHHHHHhhCCC--C--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHh-ccCChhhcc
Confidence            334566667776643  3  499999999999877553   2223444    66543 334422111111 01111100 


Q ss_pred             --EeCCCCCc----ccCHHHHHhhhhccCCCCCceEEEEe-cc-ccc-chhc---HHHHHH-HHHCCcEEEecccccCcc
Q 021539          198 --APETWLDL----RIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNG-TRYS---MHWISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       198 --vp~~~~~g----~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG-~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                        .|... +-    -.+.+++++.++++     +++|.+. .+ .+| ...|   +++|.+ |+++|+++++|-+|.-.|
T Consensus       149 ~~~~~~~-~~~~~~~~d~~~l~~~l~~~-----~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g  222 (389)
T PRK01278        149 GFGPLVP-GFDQVPFGDIEALKAAITPN-----TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG  222 (389)
T ss_pred             cCCCCCC-CceEeCCCCHHHHHHhhCCC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence              11110 10    13678888888653     4666654 33 466 3334   556655 689999999999998214


Q ss_pred             Ccc----cCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          265 EDQ----LALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       265 ~~p----ldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      ...    .+.....+|++++  -| -+| + |  +|+++.+++..+
T Consensus       223 ~~g~~~~~~~~~~~pdi~t~--sK-~l~-~-G~~ig~~~~~~~~~~  263 (389)
T PRK01278        223 RTGKLFAHEWAGVTPDIMAV--AK-GIG-G-GFPLGACLATEEAAK  263 (389)
T ss_pred             cCCcceeecccCCCCCEEEE--eh-hcc-C-CcceEEEEEcHHHHh
Confidence            321    1222356887765  48 555 2 4  899998876543

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=98.07  E-value=2.2e-05  Score=76.94  Aligned_cols=159  Identities=7%  Similarity=-0.020  Sum_probs=91.8

Q ss_pred             HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCC----CCCCEEEE--ccCcChHHHHHHHHhCC----c
Q 021539          130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPF----FKGNYYLT--IISEESDYIKGFAAQKE----S  193 (311)
Q Consensus       130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~----~~Gd~Ils--~~eh~~~~~~~la~~~G----~  193 (311)
                      +.|+.||+++      ++++++  |++|+|+++|+.+++..+.-    .+|+.|+.  .-++..  ....+...+    .
T Consensus        78 ~LR~aia~~~~~~~g~~v~~~~--I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~--y~~~~~~~~~~~~~  153 (416)
T PRK09440         78 ELIEALAALLNERYGWNISPQN--IALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIG--YADAGLEEDLFVSY  153 (416)
T ss_pred             HHHHHHHHHHHHHhCCCCChhh--EEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchh--hHHHhhccCceeec
Confidence            6788888877      356554  99999999999999887742    35777754  223221  111111111    2


Q ss_pred             EEEEEeCCCC--CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccC
Q 021539          194 KVIAAPETWL--DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGE  265 (311)
Q Consensus       194 ~V~~vp~~~~--~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~  265 (311)
                      ....++++.+  +-.++.++|+  +..+     ++++.++  ++=||++++.+++   .+ |+++++++++|-+... ..
T Consensus       154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~-----~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~  225 (416)
T PRK09440        154 RPNIELLPEGQFKYHVDFEHLH--IDED-----TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-PF  225 (416)
T ss_pred             ccccccccccccccCCCHHHcc--cCCC-----ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-cC
Confidence            2222333221  1246777776  2322     3444443  3359999997655   33 5789999999999753 21


Q ss_pred             ccc---CCCC--CCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539          266 DQL---ALAL--HRPDLVLCTLDNNTHAQPL-KITCLLVRRKS  302 (311)
Q Consensus       266 ~pl---dl~~--l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~  302 (311)
                      ..+   +...  .+-=+++.|+-| + +.|- .+|.++..+++
T Consensus       226 ~~~~~~~~~~~~~~~vI~~~SfSK-~-~~pGlRiG~~i~~~~l  266 (416)
T PRK09440        226 PGIIFSEATPLWNPNIILCMSLSK-L-GLPGVRCGIVIADEEI  266 (416)
T ss_pred             CCcchhhcCccccCCeEEEecccc-c-CCCcceEEEEeCCHHH
Confidence            111   1111  111267789999 5 4341 38888876554

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=98.05  E-value=6.3e-05  Score=73.90  Aligned_cols=157  Identities=14%  Similarity=0.037  Sum_probs=95.6

Q ss_pred             HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcE--------
Q 021539          130 QARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESK--------  194 (311)
Q Consensus       130 ~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~--------  194 (311)
                      +.|+.||+++      ++++++  |++|+|+++++.++...  +.+||.|+.. -.+. . ....++..|.+        
T Consensus        80 ~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~l~~~--~~~gd~V~v~~P~Y~-~-~~~~~~~~g~~~~~~~~~~  153 (409)
T PRK07590         80 FLREKIAENDYQARGCDISADE--IFISDGAKCDTGNILDI--FGPDNTIAVTDPVYP-V-YVDTNVMAGRTGEANEDGR  153 (409)
T ss_pred             HHHHHHHHHHHHhcCCcCChhh--EEECCCHHHHHHHHHHh--cCCCCEEEEeCCCCc-c-hHHHHHHcCCccccccccc
Confidence            6888888875      676654  99999999999987543  3688988632 2222 1 12233445665        


Q ss_pred             ---EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH---H-HHHCCcEEEecccccCc--
Q 021539          195 ---VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF--  263 (311)
Q Consensus       195 ---V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~--  263 (311)
                         +..+|.+..++ +..+ +.   ..+     ++++.++  ++=||++++.+++.   + |++++++++.|-+..-.  
T Consensus       154 ~~~~~~v~~~~~~~-~~~d-~~---~~~-----~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~  223 (409)
T PRK07590        154 YSGIVYLPCTAENN-FVPE-LP---EEK-----VDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFIS  223 (409)
T ss_pred             ccceeEeecccccC-Cccc-Cc---ccC-----ceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhcc
Confidence               77788753222 2221 11   122     3454443  33599999987653   3 57899999999876510  


Q ss_pred             -cCcccCCCCCC----CcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          264 -GEDQLALALHR----PDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       264 -G~~pldl~~l~----~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                       +..+..+..+.    .-+++.|+=| .||.| |  +|.++..+++++
T Consensus       224 ~~~~~~~~~~~~~~~~~vi~~~SfSK-~~~~p-GlRiG~~i~~~~li~  269 (409)
T PRK07590        224 DPSLPHSIYEIEGARECAIEFRSFSK-TAGFT-GTRCAYTVVPKELKG  269 (409)
T ss_pred             CCCCCcchhhCCCcccceEEEecCcc-ccCCc-CceeEEEEcCHHHhh
Confidence             11122232221    2266779999 88744 5  799988766554

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=98.02  E-value=8.9e-05  Score=71.37  Aligned_cols=153  Identities=14%  Similarity=0.074  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+.|+.+|+++|+++.+ +|++|+|++|++.++...  +.+|+.++..-.+ .. ....++..|.++..+|.+.      
T Consensus        56 ~~L~~~ia~~~~~~~~~-~I~i~~Gs~e~i~~l~~~--~~~g~v~v~~P~y-~~-y~~~~~~~g~~~~~v~~~~------  124 (339)
T PRK06959         56 DGLAACAARYYGAPDAA-HVLPVAGSQAAIRALPAL--LPRGRVGIAPLAY-SE-YAPAFARHGHRVVPLDEAA------  124 (339)
T ss_pred             HHHHHHHHHHhCCCCcc-cEEECcCHHHHHHHHHHh--cCCCeEEEcCCCc-HH-HHHHHHHCCCEEEeecccc------
Confidence            37899999999996322 499999999999977653  3566633321111 12 2334556799888777642      


Q ss_pred             HHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH----HHHCCcEEEecccccCccCcccCCCCC-CCc--EEEEc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQLALALH-RPD--LVLCT  281 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~pldl~~l-~~D--fl~~S  281 (311)
                       +.+    .+..+   .-+++-+.+=||++++.+++.+    +.+++.++++|=+-.- -.....+..+ +.+  +++-|
T Consensus       125 -~~~----~~~~~---~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~l~S  195 (339)
T PRK06959        125 -DTL----PAALT---HLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVVLRS  195 (339)
T ss_pred             -hhc----cccCC---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEEEec
Confidence             111    11111   2233334446999999988744    3467888899987543 2111122111 112  77889


Q ss_pred             cccCcCCCCCc--eEEEEEeCCCC
Q 021539          282 LDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       282 ~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +=| .||.| |  +|.++..+++.
T Consensus       196 fSK-~~gl~-GlRiGy~v~~~~li  217 (339)
T PRK06959        196 VGK-FFGLA-GVRAGFVLAAPALL  217 (339)
T ss_pred             Chh-hcCCc-chheEEEecCHHHH
Confidence            999 88844 6  79999876543

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.02  E-value=6.7e-05  Score=75.16  Aligned_cols=166  Identities=15%  Similarity=0.058  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CC-CC---CEEEEccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FF-KG---NYYLTIISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~-~G---d~Ils~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..++=+-++.+||++++.- =.-|.|.|||+-..-..+.   .. +|   -++++...- ..++..+++..+++++.+|+
T Consensus       122 e~~~Vnm~~~L~~~~~~~~-g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v-~~a~eK~a~yf~v~l~~V~~  199 (491)
T KOG1383|consen  122 EAECVNMIANLFNAPSDSC-GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV-HAAFEKAARYFEVELREVPL  199 (491)
T ss_pred             HHHHHHHHHHHhcCCcccc-CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH-HHHHHHHHhhEEEEEEeeec
Confidence            3477788999999986532 2346788888433222221   01 11   123322110 12355667777889999999


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH-CCcEEEecccccCc-------cCcccC
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR-NAWHVLLDATGLVF-------GEDQLA  269 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~-------G~~pld  269 (311)
                      +..+-++|+..+.+.++++     |.+++..+-  -+|.+=|+++|.+ +-+ .++.+|+||+-.-.       .-.++|
T Consensus       200 ~~~~~~~D~~k~~~~i~eN-----ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd  274 (491)
T KOG1383|consen  200 DEGDYRVDPGKVVRMIDEN-----TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD  274 (491)
T ss_pred             cccceEecHHHHHHHhccc-----eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccc
Confidence            8767899999999999986     455554433  4999999999966 455 99999999985410       223567


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +..-++--+++++||+=|. |+|+|..+-|.+
T Consensus       275 Fr~p~V~Sisa~~HKYGl~-~~G~~~vl~r~k  305 (491)
T KOG1383|consen  275 FRVPGVTSISADGHKYGLA-PAGSSWVLYRNK  305 (491)
T ss_pred             cCCCCceeEeeccceeeee-ecCcEEEEEccc
Confidence            7777788899999994334 999998777654

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=98.01  E-value=8.7e-05  Score=70.88  Aligned_cols=157  Identities=13%  Similarity=0.071  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+.|+.+|+++|.+++.  |+.|+|+++++.++.. + +.+|+.++..-.+  ......++..|.++..+|.+. . ..+
T Consensus        43 ~~lr~~ia~~~~~~~~~--I~it~Gs~~~l~~~~~-~-~~~~~vv~~~P~y--~~y~~~~~~~G~~v~~vp~~~-~-~~~  114 (332)
T PRK06425         43 TDIEDQIKIYTQGLKIK--VLIGPGLTHFIYRLLS-Y-INVGNIIIVEPNF--NEYKGYAFTHGIRISALPFNL-I-NNN  114 (332)
T ss_pred             HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHH-H-hCCCcEEEeCCCh--HHHHHHHHHcCCeEEEEeCCc-c-cCc
Confidence            47999999999998765  9999999999999886 3 3456544432111  123344667799999999863 2 234


Q ss_pred             HHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHHCCcEEEecccccCc-cCc--c-cCC-CCCCCcE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF-GED--Q-LAL-ALHRPDL  277 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~-G~~--p-ldl-~~l~~Df  277 (311)
                      .+.+++   .+     ++++.++  ++=||..+|.+++.+    |+++++++++|-+=.-. ...  + ..+ ...+-=+
T Consensus       115 ~~~l~~---~~-----~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi  186 (332)
T PRK06425        115 PEILNN---YN-----FDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI  186 (332)
T ss_pred             HHHHhh---cC-----CCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence            443332   12     3454443  335999999876532    57889999999873310 111  0 111 1112236


Q ss_pred             EEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          278 VLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       278 l~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ++-|+=| .||.| |  +|.++..+++.
T Consensus       187 ~~~SfSK-~~~l~-GlRiGy~v~~~~li  212 (332)
T PRK06425        187 IGRSLTK-ILGIP-SLRIGYIATDDYNM  212 (332)
T ss_pred             EEeecHH-hcCCc-hhhheeeecCHHHH
Confidence            6679999 88844 6  69998876553

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=98.01  E-value=8.8e-05  Score=78.60  Aligned_cols=166  Identities=10%  Similarity=-0.014  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~  204 (311)
                      ..+.+|.+.+|+.+|++.   .-..|.|+|.|+.+++.+. ..+||.|+..-.-|-+....+. -.|+.-++++..++ .
T Consensus       195 G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haLi-lsga~PVYl~P~rn~~  269 (714)
T PRK15400        195 GPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLMM-MSDVTPIYFRPTRNAY  269 (714)
T ss_pred             hHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeEEEeccccccc
Confidence            345689999999999963   2555788888988888876 4789998765543423333332 34888888764432 1


Q ss_pred             ---cccC-----HHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC--C--
Q 021539          205 ---LRIK-----GSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--L--  270 (311)
Q Consensus       205 ---g~id-----~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l--  270 (311)
                         |.|+     .+.+++.++...+......+.++.- --|+.+++++|.+ +|.++  +|+|-|+..  +..+.  +  
T Consensus       270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwga--h~~F~p~~~~  345 (714)
T PRK15400        270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVP--YTNFSPIYEG  345 (714)
T ss_pred             CCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchh--hhccCcccCC
Confidence               2345     7888888876432111113443322 4799999999966 67777  699998763  33221  1  


Q ss_pred             -CC--CCC---c--EEEEccccCcCCCCCceEEEEEeCC
Q 021539          271 -AL--HRP---D--LVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       271 -~~--l~~---D--fl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                       +.  .+.   |  |++-|.|| .+++-+....|-++..
T Consensus       346 ~sam~~ga~~~~~i~vtQStHK-tL~alTQaS~LHvkg~  383 (714)
T PRK15400        346 KCGMSGGRVEGKVIYETQSTHK-LLAAFSQASMIHVKGD  383 (714)
T ss_pred             cChhhcCCCCCCceEEEEchhh-cccchhHHhHHHHcCC
Confidence             11  234   5  99999999 7765666677777654

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=98.00  E-value=0.00026  Score=75.08  Aligned_cols=166  Identities=10%  Similarity=0.021  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-C
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-D  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~  204 (311)
                      ..+.+|.+.+|+.+|++.   .-..|.|+|.|+.+++.+. ..+||.|+..-.-|-+....+. -.|+..++++..++ .
T Consensus       195 G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aLi-lsga~PVYl~P~~n~~  269 (713)
T PRK15399        195 GPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLLM-MSDVVPIWLKPTRNAL  269 (713)
T ss_pred             hHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHH-HcCCeeEEeccccccc
Confidence            345689999999999963   2556788899998888876 5789999755543423333332 34888888764431 2


Q ss_pred             ---cccCH-----HHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHHHHHCCcEE-EecccccCccCcccC-----
Q 021539          205 ---LRIKG-----SQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISEAHRNAWHV-LLDATGLVFGEDQLA-----  269 (311)
Q Consensus       205 ---g~id~-----~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~a~~~g~~v-lvDAaQsv~G~~pld-----  269 (311)
                         |.|+.     +.+++.++......+.+.+.++.- --|+..++++|.+.-  |+.+ |+|-|+..  +..+.     
T Consensus       270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~--g~~~ilvDEAhga--h~~F~p~~~~  345 (713)
T PRK15399        270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL--DVPSIHFDSAWVP--YTHFHPIYQG  345 (713)
T ss_pred             CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh--CCCEEEEeccchh--hhhcCcccCC
Confidence               23555     888888876432111134444432 479999999996633  6766 79999872  33221     


Q ss_pred             CCCC----CCcEE---EEccccCcCCCCCceEEEEEeCC
Q 021539          270 LALH----RPDLV---LCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       270 l~~l----~~Dfl---~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      .+.+    ++|.+   +-|.|| .+++-+....|-++..
T Consensus       346 ~sam~~~~~aD~~i~~tQStHK-tL~alTQaS~iHvk~~  383 (713)
T PRK15399        346 KSGMSGERVPGKVIFETQSTHK-MLAAFSQASLIHIKGE  383 (713)
T ss_pred             cChhhCCCCCCeeeeeeeehhc-cccccchheeeeecCC
Confidence            1222    35666   999999 7766778888888765

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=97.96  E-value=0.00032  Score=69.74  Aligned_cols=151  Identities=9%  Similarity=-0.010  Sum_probs=101.0

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC--hHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE--SDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~--~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .....++.+-|+..   .++|.||.+.....+..-.  ..|++|++.. -+.  ...++.+..+.|+++..+..+     
T Consensus        81 ~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-----  150 (409)
T KOG0053|consen   81 VLESGIAALEGAAH---ALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-----  150 (409)
T ss_pred             HHHHHHHHHhCCce---EEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-----
Confidence            45667888999852   4777777655444443333  4788886432 222  345677777889988887654     


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEccc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLD  283 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~H  283 (311)
                       +.+.++..+.++     +.+|-+-  .+=+..+.||++|++ ||++|+.++||.|=+- + ..++.-.+++|.++=|+=
T Consensus       151 -~~~~~~~~i~~~-----t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~-p-~~~~pL~lGADIV~hSaT  222 (409)
T KOG0053|consen  151 -DLKKILKAIKEN-----TKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGS-P-YNQDPLPLGADIVVHSAT  222 (409)
T ss_pred             -hHHHHHHhhccC-----ceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCc-c-cccChhhcCCCEEEEeee
Confidence             356677777764     4566543  224789999999976 7999999999999554 3 345555578999999999


Q ss_pred             cCcCCCCCc-e-EEEEEe
Q 021539          284 NNTHAQPLK-I-TCLLVR  299 (311)
Q Consensus       284 K~l~G~P~G-i-G~L~vr  299 (311)
                      | ++|+-.- + |++.++
T Consensus       223 K-yi~Ghsdvi~G~iv~n  239 (409)
T KOG0053|consen  223 K-YIGGHSDVIGGSVVLN  239 (409)
T ss_pred             e-eecCCcceeeeEEecC
Confidence            9 5553332 3 444443

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=97.95  E-value=0.00011  Score=73.97  Aligned_cols=178  Identities=8%  Similarity=0.016  Sum_probs=105.8

Q ss_pred             cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-----CcC--hHHHHH
Q 021539          114 SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-----SEE--SDYIKG  186 (311)
Q Consensus       114 ~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-----eh~--~~~~~~  186 (311)
                      ..-.+|-|...-.   +..+.++++||-.  .  +++|...+.+.+++...+.-.+|+++.+..     -|+  -...+.
T Consensus        65 ~GDD~Y~gdpSv~---~Lee~vael~G~E--~--alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g  137 (467)
T TIGR02617        65 RGDEAYSGSRSYY---ALAESVKNIFGYQ--Y--TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQG  137 (467)
T ss_pred             cCCcccccCchHH---HHHHHHHHHhCCc--e--EEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchH
Confidence            3345666666544   4566689999984  2  899998898888887665422444433111     122  011122


Q ss_pred             HHHhCCcEEEEEeC--------CC-CCcccCHHHHHhhhhccCCCCCceE--EEEecc-cccchhcHHHHH---H-HHHC
Q 021539          187 FAAQKESKVIAAPE--------TW-LDLRIKGSQLSQNFRRKCKYTPKGL--FSYPVV-VNGTRYSMHWIS---E-AHRN  250 (311)
Q Consensus       187 la~~~G~~V~~vp~--------~~-~~g~id~~~L~~~l~~~~~~~~t~L--Vs~~~~-~tG~i~Pi~~I~---~-a~~~  250 (311)
                      .+...|+.+..++.        +. .+|.+|+++|++++++.-. .+...  ..++.+ .-|+..|++.|.   + |+++
T Consensus       138 ~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~  216 (467)
T TIGR02617       138 HSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY  216 (467)
T ss_pred             HHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc
Confidence            23345777665432        11 2688999999999985310 01112  222334 368999998773   3 5899


Q ss_pred             CcEEEecccccCc----------cCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          251 AWHVLLDATGLVF----------GEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       251 g~~vlvDAaQsv~----------G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      |+.+|+|||=.+-          +....++++      ..+|.+++|+-| =+|.|-| |+|..+++
T Consensus       217 GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK-glgApvG-g~Lag~d~  281 (467)
T TIGR02617       217 DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK-DAMVPMG-GLLCFKDD  281 (467)
T ss_pred             CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC-CCCCccc-ceEEecch
Confidence            9999999965430          223333331      358999999999 5555844 34444443

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PLN02955 8-amino-7-oxononanoate synthase

Probab=97.93  E-value=0.00051  Score=69.89  Aligned_cols=156  Identities=9%  Similarity=0.032  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC------------CC-CCCCEEEEccCcChHHH--HHHHHhC-
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY------------PF-FKGNYYLTIISEESDYI--KGFAAQK-  191 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~------------~~-~~Gd~Ils~~eh~~~~~--~~la~~~-  191 (311)
                      .++.-+.+|+|+|.+.   .++|.+|.. |+..++..+            +. .+++.|++.-.-|...+  ..+++.+ 
T Consensus       149 h~~LE~~LA~f~g~e~---all~sSGy~-AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~  224 (476)
T PLN02955        149 HRLLESSLADLKKKED---CLVCPTGFA-ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQG  224 (476)
T ss_pred             HHHHHHHHHHHHCCCc---EEEECChHH-HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccC
Confidence            3578889999999842   266655554 444333332            11 23445665444342222  1233333 


Q ss_pred             CcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-
Q 021539          192 ESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-  267 (311)
Q Consensus       192 G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-  267 (311)
                      ++++...+-+      |.++|+++++...+  ...+|++..+  ..|.+.|+++|.+ ++++|+.++||=+|+. |..- 
T Consensus       225 ~a~~~~f~HN------D~~~Le~~L~~~~~--~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~-Gv~G~  295 (476)
T PLN02955        225 NVEVFVYRHC------DMYHLNSLLSSCKM--KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGT-FVCGE  295 (476)
T ss_pred             CceEEEeCCC------CHHHHHHHHHhCCC--CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccC-ceecC
Confidence            4677666543      57888888865321  2356665555  3799999999976 5889999999999997 5432 


Q ss_pred             --------cCCCCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          268 --------LALALHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       268 --------ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                              +++. -++|+++.|+=| -+|..  -|++..++
T Consensus       296 ~G~G~~e~~g~~-~di~ii~~TLsK-A~G~~--GGfi~gs~  332 (476)
T PLN02955        296 NGGGVAEEFNCE-ADVDLCVGTLSK-AAGCH--GGFIACSK  332 (476)
T ss_pred             CCCcHHHHhCCC-CCCcEEEEeCcc-chhcc--CceeecHH
Confidence                    2332 368999999999 77732  34444444

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=97.90  E-value=0.00024  Score=70.89  Aligned_cols=162  Identities=17%  Similarity=0.077  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhcCCCCCC----CEEEEcc-CcChHHHHHHHHhCCcEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKE-----AMLMIGESYPFFKG----NYYLTII-SEESDYIKGFAAQKESKV  195 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTe-----alnlv~~s~~~~~G----d~Ils~~-eh~~~~~~~la~~~G~~V  195 (311)
                      +++.+..+-+.+.-|-+  .  |.+.+|+-.     ++ ++++.|-...|    +.++.+. -|-.|...  |.--|.+|
T Consensus       109 ~li~~Lq~~L~~ITG~D--a--vsLQP~AGAqGE~aGl-l~Ir~YHe~rG~~~R~~~LIP~SAHGTNPAS--Aam~G~~V  181 (496)
T COG1003         109 ELIYELQEWLKEITGMD--A--VSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRNICLIPDSAHGTNPAS--AAMAGFKV  181 (496)
T ss_pred             HHHHHHHHHHHHhcCCc--e--eeccCCCCcchhhHHH-HHHHHHHHHcCCCcCcEEEeeccccCCChhh--HhhcCceE
Confidence            44567777777777774  3  888876532     23 34444422233    2344333 34444321  22249999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--c-ccch-hcHHHHHHH-HHCCcEEEecccccCccCc-ccC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V-NGTR-YSMHWISEA-HRNAWHVLLDATGLVFGED-QLA  269 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~-tG~i-~Pi~~I~~a-~~~g~~vlvDAaQsv~G~~-pld  269 (311)
                      +.|+.+. +|.||+++|++.+.++       +-+++..  + .|+. ..|.+|+++ |+.|..+..|+|-.= +.. ...
T Consensus       182 V~V~~~~-~G~VDlddLk~k~~~~-------~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlN-A~vG~~r  252 (496)
T COG1003         182 VVVKCDE-NGNVDLDDLRAKAEDN-------LAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLN-AIVGLAR  252 (496)
T ss_pred             EEEecCC-CCCccHHHHHHHhccc-------eeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchh-hhhcccc
Confidence            9999986 8999999999998854       4444432  3 5765 568899875 999999999999763 221 123


Q ss_pred             CCCCCCcEEEEccccCcC------CCCCceEEEEEeCCCCcc
Q 021539          270 LALHRPDLVLCTLDNNTH------AQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~------G~P~GiG~L~vr~~~~~~  305 (311)
                      -.+++.|.+-++.|| -|      |+| |+|=+-|+..+...
T Consensus       253 PGd~G~DV~HlNLHK-TF~iPHGGGGP-G~GPvgVk~~L~pf  292 (496)
T COG1003         253 PGDMGFDVVHLNLHK-TFCIPHGGGGP-GAGPVGVKAHLAPF  292 (496)
T ss_pred             ccccccceEEeeccc-ccccCCCCCCC-CCCceehHhhcccc
Confidence            345789999999999 54      334 77777777665543

>PRK08637 hypothetical protein; Provisional

Probab=97.89  E-value=0.00029  Score=68.76  Aligned_cols=166  Identities=11%  Similarity=0.041  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHcC-----CCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG-----LSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg-----a~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+++++.     .+++ ..+|++|+|+++++.+++..+. .+||.|+.. -.+. .....++...|.++..+|..
T Consensus        47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~~~~~~~~~~g~~vv~v~~~  124 (388)
T PRK08637         47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWG-NYKLTFNTRRGAEIVTYPIF  124 (388)
T ss_pred             HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCc-cHHHHHHHhcCCEEEEeccc
Confidence            357777777652     3322 1358999999999999998874 688988532 1222 22222233468999999873


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH----HHH-----CCcEEEecccccC---ccCcc
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE----AHR-----NAWHVLLDATGLV---FGEDQ  267 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~----a~~-----~g~~vlvDAaQsv---~G~~p  267 (311)
                      .++..++.+++++.++...+ ..+.++.++  ++=||..++.+++.+    |++     ++++++.|-+-.-   .+...
T Consensus       125 ~~~~~~d~~~l~~~~~~~~~-~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~  203 (388)
T PRK08637        125 DEDGGFDTDALKEALQAAYN-KGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYK  203 (388)
T ss_pred             CCCCcCCHHHHHHHHHhhcc-CCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccc
Confidence            22445799999888861100 113444333  445999999776532    343     8999999987531   02211


Q ss_pred             cCC-C---CCCCcE--E-EEccccCcCCCCCc--eEEEEEe
Q 021539          268 LAL-A---LHRPDL--V-LCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       268 ldl-~---~l~~Df--l-~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      .++ .   ...-..  + +.|+-| .|+.| |  +|.+++.
T Consensus       204 ~~~~~~~~~~~~~vi~i~~~s~SK-~~~~p-GlRlG~~~~~  242 (388)
T PRK08637        204 ESLFAALANLHSNILAVKLDGATK-EEFVW-GFRVGFITFG  242 (388)
T ss_pred             hhhHHHhhcccccceEEEeccccc-cCCCc-ccceEEEEEc
Confidence            111 1   111122  2 238899 66645 5  7888864

>PLN02624 ornithine-delta-aminotransferase

Probab=97.85  E-value=0.00039  Score=70.37  Aligned_cols=166  Identities=11%  Similarity=0.114  Sum_probs=97.1

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCC-----CCCC-EEEEcc-CcCh--HHHHHHH--
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPF-----FKGN-YYLTII-SEES--DYIKGFA--  188 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~-----~~Gd-~Ils~~-eh~~--~~~~~la--  188 (311)
                      .......+.-++++++++.  +  .+.|+.+++||+..++.   .+..     .+++ .|++.. .+|.  .....+.  
T Consensus       114 ~~~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~  189 (474)
T PLN02624        114 FYNDKFPEFAEYLTSMFGY--D--MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCD  189 (474)
T ss_pred             cCCHHHHHHHHHHHhhcCC--C--eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCC
Confidence            3344455677778888764  2  49999999998876543   2100     1123 354432 2341  1111110  


Q ss_pred             --HhCC-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEE
Q 021539          189 --AQKE-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHV  254 (311)
Q Consensus       189 --~~~G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~v  254 (311)
                        ...+     ..+..+|.+      +.+.|++.++...  ..++.|.+. .+ .+|.+.|    +++|.+ |+++|+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~~--~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gill  261 (474)
T PLN02624        190 NEATRGFGPLLPGHLKVDFG------DLDALEKIFEEDG--DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLM  261 (474)
T ss_pred             ccccccCCCCCCCceEeCCC------CHHHHHHHHHhCC--CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence              0111     112334332      4678888886421  124555553 33 6899999    888865 69999999


Q ss_pred             Eeccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          255 LLDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       255 lvDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++|-+|. + |..    ..+.....+|++++|  |.+.|+--.+|++++++++.
T Consensus       262 I~DEv~tG~-GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~  312 (474)
T PLN02624        262 IADEIQTGL-ARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVM  312 (474)
T ss_pred             EEeccccCc-CcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHH
Confidence            9999998 4 422    224445679999997  95544213478888886553

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=97.84  E-value=0.00089  Score=68.88  Aligned_cols=147  Identities=13%  Similarity=0.073  Sum_probs=90.4

Q ss_pred             eEEEeCCHHHHHHHHHhcC----CCCCCCEEEEc-cCcChHHHHHH-HHhCCcEEEEEeCCCCC------cccCHHHHHh
Q 021539          147 LVLFVPNYKEAMLMIGESY----PFFKGNYYLTI-ISEESDYIKGF-AAQKESKVIAAPETWLD------LRIKGSQLSQ  214 (311)
Q Consensus       147 ~VvFTsnaTealnlv~~s~----~~~~Gd~Ils~-~eh~~~~~~~l-a~~~G~~V~~vp~~~~~------g~id~~~L~~  214 (311)
                      +|+.|+|+|+|+..++.++    -..+||.|+.. -.+. ...... ....|++++.++.+..+      -.++.++|++
T Consensus       157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~-~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~  235 (521)
T TIGR03801       157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFT-PYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEK  235 (521)
T ss_pred             eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcH-HHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHH
Confidence            6999999999999887763    25689998632 2221 111111 12247777777764211      3578888988


Q ss_pred             hhhccCCCCCceEEE-E-ecccccchhcHHHH---HH-HHHC--CcEEEecccccCccCcccCCCCCCC--cEEEEcccc
Q 021539          215 NFRRKCKYTPKGLFS-Y-PVVVNGTRYSMHWI---SE-AHRN--AWHVLLDATGLVFGEDQLALALHRP--DLVLCTLDN  284 (311)
Q Consensus       215 ~l~~~~~~~~t~LVs-~-~~~~tG~i~Pi~~I---~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~~--Dfl~~S~HK  284 (311)
                      +++++     ++++. + +++=||.+++.+++   .+ |+++  ++++++|=+-.-......++...-+  -+++.|+=|
T Consensus       236 ~~~~~-----~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK  310 (521)
T TIGR03801       236 LRDPS-----IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSK  310 (521)
T ss_pred             hcCCC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchh
Confidence            77654     34443 3 44469999996655   33 5554  8999999875420111122211112  377889999


Q ss_pred             CcCCCCCc--eEEEEEeCC
Q 021539          285 NTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       285 ~l~G~P~G--iG~L~vr~~  301 (311)
                       .||.| |  +|+++..++
T Consensus       311 -~fg~~-G~RlG~i~~~~~  327 (521)
T TIGR03801       311 -YFGAT-GWRLGTIALHKD  327 (521)
T ss_pred             -hccCc-hhhhhhhhcCch
Confidence             88743 5  888887654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=97.83  E-value=0.0003  Score=69.54  Aligned_cols=149  Identities=14%  Similarity=0.067  Sum_probs=84.0

Q ss_pred             eEEEeCCHHHHHHHHHhcCC-C----CCC-CEEEE-ccCcChHHH--HHHHHhCCcEEEEEeCCC--C-CcccCHHHHHh
Q 021539          147 LVLFVPNYKEAMLMIGESYP-F----FKG-NYYLT-IISEESDYI--KGFAAQKESKVIAAPETW--L-DLRIKGSQLSQ  214 (311)
Q Consensus       147 ~VvFTsnaTealnlv~~s~~-~----~~G-d~Ils-~~eh~~~~~--~~la~~~G~~V~~vp~~~--~-~g~id~~~L~~  214 (311)
                      .+.|+++++||+..++.... +    ++| +.|++ ...+|...+  ..+.........+.|...  . ...-+.+++++
T Consensus        95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~  174 (395)
T PRK03715         95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEK  174 (395)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHH
Confidence            59999999999887655321 1    123 34553 333452211  111111111111111110  0 00125678888


Q ss_pred             hhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccc
Q 021539          215 NFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLD  283 (311)
Q Consensus       215 ~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~H  283 (311)
                      .+.++     +..|.+. .+ ..|.+.|    +++|.+ |+++|+++++|-+|.-.|..-    .+.-...||+++++  
T Consensus       175 ~l~~~-----~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g--  247 (395)
T PRK03715        175 LITDK-----TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG--  247 (395)
T ss_pred             HcCCC-----ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh--
Confidence            88643     4566554 33 5788887    888865 689999999999997213221    12223469999886  


Q ss_pred             cCcCCCCCceEEEEEeCCCC
Q 021539          284 NNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       284 K~l~G~P~GiG~L~vr~~~~  303 (311)
                      |++-|+ --+|+++.+++..
T Consensus       248 K~lg~G-~p~~av~~~~~i~  266 (395)
T PRK03715        248 KGIGGG-VPLAALLAKAEVA  266 (395)
T ss_pred             hhhhCC-cceEEEEEccccc
Confidence            845442 2288888888764

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=97.82  E-value=0.00067  Score=66.50  Aligned_cols=165  Identities=12%  Similarity=0.056  Sum_probs=95.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCCCC-CEEEEcc-CcChHHHHHHHH-----
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFFKG-NYYLTII-SEESDYIKGFAA-----  189 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~~G-d~Ils~~-eh~~~~~~~la~-----  189 (311)
                      .....+..+.++++++.  +  .+.|++++++|+..++...        ....| +.|++.. .||...+-.+..     
T Consensus        78 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~  153 (401)
T TIGR01885        78 NDVFGEFAEYVTKLFGY--D--KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPD  153 (401)
T ss_pred             CHHHHHHHHHHHhhcCC--C--EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcc
Confidence            34456788889999874  2  4999999999988766542        01123 3455443 355221111111     


Q ss_pred             ---hCC---cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          190 ---QKE---SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       190 ---~~G---~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                         ..+   ..+..+|.+      +.++|++.+++..  .....|.+- .. .+|.+.|    +++|.+ |+++|+++++
T Consensus       154 ~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~  225 (401)
T TIGR01885       154 SRTNFGPYVPGFKKIPYN------NLEALEEALEDHG--PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIA  225 (401)
T ss_pred             cccccCCCCCCceEeCCC------CHHHHHHHHHhcC--CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence               012   122223321      4678888886421  123444443 22 5899998    888866 6999999999


Q ss_pred             cccccCccCc--c--cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          257 DATGLVFGED--Q--LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       257 DAaQsv~G~~--p--ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |-+|.-.|..  .  .+.....+|++++|  |++-|+=.-+|+++.++++.
T Consensus       226 DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~  274 (401)
T TIGR01885       226 DEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVM  274 (401)
T ss_pred             echhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHH
Confidence            9998521321  1  22334578999887  95443101267788776543

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=97.74  E-value=0.00034  Score=67.85  Aligned_cols=163  Identities=11%  Similarity=0.013  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEE-ccCcChHHHHHHH--Hh----CCc--EEEEE
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLT-IISEESDYIKGFA--AQ----KES--KVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils-~~eh~~~~~~~la--~~----~G~--~V~~v  198 (311)
                      .+.+..+|+.|...++. .+.|++++|||+..++... .+..++.|++ ...+|...+..+.  ..    .+.  .+..+
T Consensus        69 ~~~~~~la~~l~~~~~~-~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~  147 (375)
T PRK04260         69 NSLQEEVAQKLIGDKDY-LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHF  147 (375)
T ss_pred             CHHHHHHHHHHhcCcCC-EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCe
Confidence            35677888766443332 4689999999988655432 1234456664 3444522221111  00    011  11001


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec-c-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--c-
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--L-  268 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--l-  268 (311)
                      +...   .-|.+.+++.+.++     +.+|.+.. + .+|++.|    ++++.+ |+++|+++++|.+|.-.|...  . 
T Consensus       148 ~~~~---~~dl~~l~~~l~~~-----~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~  219 (375)
T PRK04260        148 SYAI---FNDLNSVKALVNKN-----TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA  219 (375)
T ss_pred             EEeC---CCCHHHHHHhcCCC-----eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence            1000   12677888877543     45666643 3 5788876    678855 689999999999985224221  1 


Q ss_pred             -CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          269 -ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       269 -dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                       ......+|++  ++-| -+| | --+|+++.+++..+
T Consensus       220 ~~~~~~~pdi~--t~sK-~l~-~G~~ig~~~~~~~~~~  253 (375)
T PRK04260        220 FEHYGIEPDIF--TLAK-GLA-NGVPVGAMLAKSSLGG  253 (375)
T ss_pred             hHhhCCCCCEE--Eecc-ccc-CCcceEEEEEcHHHHh
Confidence             1233578966  5689 555 3 12899999876544

>PRK09275 aspartate aminotransferase; Provisional

Probab=97.71  E-value=0.00073  Score=69.60  Aligned_cols=148  Identities=11%  Similarity=0.087  Sum_probs=89.4

Q ss_pred             CeEEEeCCHHHHHHHHHhcC----CCCCCCEEEEccCcChHHHHHHHHhC--CcEEEEEeCCCC-CcccCHHHHHhhhhc
Q 021539          146 YLVLFVPNYKEAMLMIGESY----PFFKGNYYLTIISEESDYIKGFAAQK--ESKVIAAPETWL-DLRIKGSQLSQNFRR  218 (311)
Q Consensus       146 y~VvFTsnaTealnlv~~s~----~~~~Gd~Ils~~eh~~~~~~~la~~~--G~~V~~vp~~~~-~g~id~~~L~~~l~~  218 (311)
                      .+|+.|+|+|+|+..+..++    -..+||.|+...=...... ..++..  |+++..++.+.. +-.++.++|++++++
T Consensus       162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~-~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~  240 (527)
T PRK09275        162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL-EIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP  240 (527)
T ss_pred             CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHH-HHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence            36999999999999887763    2578999863321111111 222222  455555554322 235788999888776


Q ss_pred             cCCCCCceEEEE--ecccccchhcHHHH---HH-HH--HCCcEEEecccccCccCcccCCCCC--CCcEEEEccccCcCC
Q 021539          219 KCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AH--RNAWHVLLDATGLVFGEDQLALALH--RPDLVLCTLDNNTHA  288 (311)
Q Consensus       219 ~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~--~~g~~vlvDAaQsv~G~~pldl~~l--~~Dfl~~S~HK~l~G  288 (311)
                      +     ++++.+  +++=||.+++-+++   .+ |+  ++++++++|-+-.-.......+...  .--+++.|+=| .||
T Consensus       241 ~-----tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK-~f~  314 (527)
T PRK09275        241 S-----IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSK-YFG  314 (527)
T ss_pred             C-----CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhh-hcc
Confidence            5     344433  44469999996654   33 43  3599999998753211111121111  12477789999 888


Q ss_pred             CCCc--eEEEEEeCC
Q 021539          289 QPLK--ITCLLVRRK  301 (311)
Q Consensus       289 ~P~G--iG~L~vr~~  301 (311)
                      . +|  +|+++..++
T Consensus       315 m-tG~RlG~i~~~~~  328 (527)
T PRK09275        315 A-TGWRLGVIALHED  328 (527)
T ss_pred             C-cHhHHhhhhcCch
Confidence            3 46  698887765

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=97.65  E-value=0.0027  Score=63.30  Aligned_cols=151  Identities=11%  Similarity=-0.035  Sum_probs=94.9

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cCh--HHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EES--DYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~~--~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      ..-++++.+=|+.   +.++| +++-.|+..+..++ +++||+|+...+ +..  .....+.++.|++|.++...     
T Consensus        67 ~lE~~~a~LEg~~---~~~af-sSGmaAI~~~~l~l-l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~-----  136 (396)
T COG0626          67 ALEEALAELEGGE---DAFAF-SSGMAAISTALLAL-LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG-----  136 (396)
T ss_pred             HHHHHHHHhhCCC---cEEEe-cCcHHHHHHHHHHh-cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC-----
Confidence            4445567777773   22554 55556777766666 467999975443 221  12344456689999887543     


Q ss_pred             cCHHHHHhhhhc-cCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539          207 IKGSQLSQNFRR-KCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL  282 (311)
Q Consensus       207 id~~~L~~~l~~-~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~  282 (311)
                       +.+.+.+.+.+ +     +++|-+-  .+-+-.+.||.+|++ ||++|+.++||-|=+- |...=.+ ++++|+++=|+
T Consensus       137 -~~~~~~~~~~~~~-----tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat-P~~q~PL-~~GaDIVvhSa  208 (396)
T COG0626         137 -DDEALEAAIKEPN-----TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT-PVLQRPL-ELGADIVVHSA  208 (396)
T ss_pred             -ChHHHHHHhcccC-----ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc-ccccChh-hcCCCEEEEec
Confidence             22345555553 4     5676552  334888999999976 6999999999999664 3222122 25899999999


Q ss_pred             ccCcCCCCCceEEEEE
Q 021539          283 DNNTHAQPLKITCLLV  298 (311)
Q Consensus       283 HK~l~G~P~GiG~L~v  298 (311)
                      =|++-|.=-=+|.+++
T Consensus       209 TKyl~GHsDvl~G~v~  224 (396)
T COG0626         209 TKYLGGHSDVLGGVVL  224 (396)
T ss_pred             cccccCCcceeeeEEe
Confidence            9944442222566655

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=97.64  E-value=0.00078  Score=66.88  Aligned_cols=170  Identities=15%  Similarity=0.100  Sum_probs=105.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      |.=..+.....++.++.+.|.  +++ .+|..|.||.+|+-....++ +.+||+|+..-=..-.+. ...+--|.+.+++
T Consensus        68 ~~G~p~L~~aL~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l-~~~GDeVii~eP~fd~Y~-~~~~maG~tpv~v  144 (420)
T KOG0257|consen   68 GYGLPQLRKALAKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGL-LNPGDEVIVFEPFFDCYI-PQVVMAGGTPVFV  144 (420)
T ss_pred             cCCchHHHHHHHHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHH-cCCCCEEEEecCcchhhh-hHHhhcCCcceee
Confidence            333444445666677776664  232 25999999999998776666 478999852211111111 1112237777787


Q ss_pred             eCC-------CCCcccCHHHHHhhhhccCCCCCceEEE-EecccccchhcHH---HHHH-HHHCCcEEEecccccC---c
Q 021539          199 PET-------WLDLRIKGSQLSQNFRRKCKYTPKGLFS-YPVVVNGTRYSMH---WISE-AHRNAWHVLLDATGLV---F  263 (311)
Q Consensus       199 p~~-------~~~g~id~~~L~~~l~~~~~~~~t~LVs-~~~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv---~  263 (311)
                      |..       .++..+|.++|+..+.++++    .+|. -+++=||.+.+=+   +|++ |+++|.+++.|=+=-.   .
T Consensus       145 ~~~~~~g~~~s~~~~~D~~~le~~~t~kTk----~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d  220 (420)
T KOG0257|consen  145 PLKPKEGNVSSSDWTLDPEELESKITEKTK----AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYD  220 (420)
T ss_pred             ccccccccccCccccCChHHHHhhccCCcc----EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhC
Confidence            765       34567899999999998742    3333 3566799998855   4555 6899999999976322   0


Q ss_pred             cCcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          264 GEDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       264 G~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      |..-+.+..+    ..-.-+.|+-| .|| -+|  +|-++..
T Consensus       221 ~~~h~r~aslPgm~ertitvgS~gK-tf~-~TGWrlGW~igp  260 (420)
T KOG0257|consen  221 GNKHIRIASLPGMYERTITVGSFGK-TFG-VTGWRLGWAIGP  260 (420)
T ss_pred             CCcceeeecCCchhheEEEeccccc-eee-eeeeeeeeeech
Confidence            2211222222    24456789999 888 566  6766663

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=97.62  E-value=0.00053  Score=68.07  Aligned_cols=149  Identities=13%  Similarity=0.203  Sum_probs=98.6

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKE---AMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTe---alnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      +..+.+|++-+-+.   .++|+|..-.   -+-+++.-+   +|..|+|..+.|.+.+... +..++.-.+..-+     
T Consensus       220 ~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~l---pgcei~SD~gNHASMI~GI-rns~v~K~IFrHN-----  287 (570)
T KOG1360|consen  220 RLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKL---PGCEIFSDEGNHASMIQGI-RNSRVPKHIFRHN-----  287 (570)
T ss_pred             hHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHC---CCcEEeccccchHHHHHHh-hhcCCcceeeccC-----
Confidence            45566788776543   3888875332   134555544   5788888777664443322 2234332233322     


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---CC-----CCCC
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---LA-----LHRP  275 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---l~-----~l~~  275 (311)
                       |+++|+++|..-.+ .-.++|++-.+  ..|.+-||+||.. +|++|++.++|-+|++ |..--.   +.     ..++
T Consensus       288 -D~~hL~~lL~~~~~-svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAV-GlYG~rGaGvgerdGvm~kv  364 (570)
T KOG1360|consen  288 -DLDHLEQLLQSSPK-SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAV-GLYGPRGAGVGERDGVMHKV  364 (570)
T ss_pred             -CHHHHHHHHHhCCC-CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhh-ccccCCCCCccccCCcchhh
Confidence             57888888876433 23579999756  4999999999966 6999999999999998 765332   22     1468


Q ss_pred             cEEEEccccCcCCCCCceEEEE
Q 021539          276 DLVLCTLDNNTHAQPLKITCLL  297 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~  297 (311)
                      |.++.+.-| -||.   +|.-+
T Consensus       365 DiIsGTLgK-afGc---VGGYI  382 (570)
T KOG1360|consen  365 DIISGTLGK-AFGC---VGGYI  382 (570)
T ss_pred             hhcccchhh-hccc---cccee
Confidence            999999999 8883   55544

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=97.61  E-value=0.0017  Score=63.75  Aligned_cols=161  Identities=17%  Similarity=0.155  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCG-LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lg-a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..+.|+.+|++.| .+++.  |+.+.|++|.+.++.+.+. .+||.++... .. +. -...++..|+++..+|...  .
T Consensus        59 ~~~l~~a~a~~~~~~~~~~--V~~gnGsde~i~~l~~~~~-~~gd~vl~~~Ptf-~~-Y~~~a~~~g~~~~~v~~~~--~  131 (356)
T COG0079          59 YRELRAALAEYYGVVDPEN--VLVGNGSDELIELLVRAFV-EPGDTVLIPEPTF-SM-YEIAAQLAGAEVVKVPLKE--F  131 (356)
T ss_pred             HHHHHHHHHHHhCCCCcce--EEEcCChHHHHHHHHHHhh-cCCCEEEEcCCCh-HH-HHHHHHhcCCeEEEecccc--c
Confidence            3479999999999 65544  8889999999999999884 5778875321 11 11 1233556799999999863  5


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHHHHHHHHH---CCcEEEeccccc--CccCcccCCCCCCCc--E
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMHWISEAHR---NAWHVLLDATGL--VFGEDQLALALHRPD--L  277 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~~I~~a~~---~g~~vlvDAaQs--v~G~~pldl~~l~~D--f  277 (311)
                      .+|.+.+.+.+++++    .-++.+ +.+=||...+.++|.++.+   .+++++||-|=.  . +..-+++-. ..+  +
T Consensus       132 ~~d~~~~~~~~~~~~----~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~~~~~l~~-~~~nli  205 (356)
T COG0079         132 RLDLDAILAAIRDKT----KLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS-PESSLELLK-YPPNLI  205 (356)
T ss_pred             ccCHHHHHHhhhcCC----CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cchhhhhcc-CCCCEE
Confidence            678888888887642    223333 3446999999999866432   389999998622  2 211122211 244  6


Q ss_pred             EEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          278 VLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       278 l~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +.=|+=| .||.| |  +|+.+..++++
T Consensus       206 vlRTfSK-a~gLA-GlRlGy~ia~~~~i  231 (356)
T COG0079         206 VLRTFSK-AFGLA-GLRVGYAIANPELI  231 (356)
T ss_pred             EEEecHH-hhhcc-hhceeeccCCHHHH
Confidence            6678999 99854 5  78887776554

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=97.61  E-value=0.0035  Score=61.79  Aligned_cols=183  Identities=15%  Similarity=0.113  Sum_probs=116.5

Q ss_pred             CCccccccccchhHHHHh----cCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC
Q 021539           96 FNDLDKSQLEPSRLLDIL----SKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG  170 (311)
Q Consensus        96 ~~~~~~~~~~~~~l~~~l----~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G  170 (311)
                      +|=.|+.=+-+..+.+.+    .+- -.|+ .......+....-..+--+-......|+|+++.--++.++++++. ++|
T Consensus        30 mWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~g  107 (388)
T COG1168          30 MWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPG  107 (388)
T ss_pred             eeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCC
Confidence            343444433333344444    333 3555 112223345555566655554444459999999999999999985 689


Q ss_pred             CEEE--EccCcChHHHHHHHHhCCcEEEEEeCCCCCccc--CHHHHHhhhhccCCCCCceEE--EEecccccchhcHHHH
Q 021539          171 NYYL--TIISEESDYIKGFAAQKESKVIAAPETWLDLRI--KGSQLSQNFRRKCKYTPKGLF--SYPVVVNGTRYSMHWI  244 (311)
Q Consensus       171 d~Il--s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i--d~~~L~~~l~~~~~~~~t~LV--s~~~~~tG~i~Pi~~I  244 (311)
                      |.|+  ++.=++   .....+..|-++...|.-.++++.  |.++|++.+.+..    ++|+  |=+|+=+|++..-+++
T Consensus       108 d~Vvi~tPvY~P---F~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~----vkl~iLCnPHNP~Grvwt~eeL  180 (388)
T COG1168         108 DGVVIQTPVYPP---FYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER----VKLFILCNPHNPTGRVWTKEEL  180 (388)
T ss_pred             CeeEecCCCchH---HHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC----ccEEEEeCCCCCCCccccHHHH
Confidence            9875  433222   222234568899888876556655  9999999998642    3444  3367779999887765


Q ss_pred             ---HH-HHHCCcEEEecccccC---ccCcccCCCCCCC-----cEEEEccccCcCC
Q 021539          245 ---SE-AHRNAWHVLLDATGLV---FGEDQLALALHRP-----DLVLCTLDNNTHA  288 (311)
Q Consensus       245 ---~~-a~~~g~~vlvDAaQsv---~G~~pldl~~l~~-----Dfl~~S~HK~l~G  288 (311)
                         .+ |.++|+.|+.|=.|+=   .|+-.+.+..+.+     -+.+.|.-| -|.
T Consensus       181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSK-tFN  235 (388)
T COG1168         181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASK-TFN  235 (388)
T ss_pred             HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccc-ccc
Confidence               44 6899999999999972   2655555544433     467777799 554

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=97.60  E-value=0.002  Score=63.44  Aligned_cols=158  Identities=13%  Similarity=0.050  Sum_probs=89.1

Q ss_pred             HHHHHHHHcCCCCCCCeEEEe--CCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHH----------HHhCCcEEEEE
Q 021539          131 ARNRALKHCGLSEDEYLVLFV--PNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF----------AAQKESKVIAA  198 (311)
Q Consensus       131 aR~~IA~~Lga~~dey~VvFT--snaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~l----------a~~~G~~V~~v  198 (311)
                      .-+..|+.||+..   -+|=.  -|+|+|+-+.+.++ +++||++++..+-+-+.+.+.          .+.+|++...+
T Consensus        59 le~iyA~vfgaE~---ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v  134 (403)
T PF06838_consen   59 LERIYADVFGAED---ALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV  134 (403)
T ss_dssp             HHHHHHHHCT-SE---EEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred             HHHHHHHHhCchh---hhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence            3344688999842   24422  27899999999887 589999987766542222222          14568899999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccc----hhcHHHHHH----HH--HCCcEEEecccccC--ccCc
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGT----RYSMHWISE----AH--RNAWHVLLDATGLV--FGED  266 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~----i~Pi~~I~~----a~--~~g~~vlvDAaQsv--~G~~  266 (311)
                      |... +|.+|.+.+++.++++     +++|.+.= +.|.    -+.+++|.+    +|  +.++.++||=+=.=  --..
T Consensus       135 ~L~~-dg~~D~~~i~~~~~~~-----tk~v~IQR-SrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E  207 (403)
T PF06838_consen  135 PLTE-DGTIDWEAIKKALKPN-----TKMVLIQR-SRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE  207 (403)
T ss_dssp             -B-T-TSSB-HHHHHHHHHTT-----EEEEEEE--S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-
T ss_pred             eecC-CCCcCHHHHHHhhccC-----ceEEEEec-CCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC
Confidence            9875 7999999999999965     68887642 3332    233455533    34  36899999975221  0123


Q ss_pred             ccCCCCCCCcEEEEccccCcCCCCCce-EEEEEeCCC
Q 021539          267 QLALALHRPDLVLCTLDNNTHAQPLKI-TCLLVRRKS  302 (311)
Q Consensus       267 pldl~~l~~Dfl~~S~HK~l~G~P~Gi-G~L~vr~~~  302 (311)
                      |.+   .++|.++.|.=|+..|+=.=+ |.+.-|+++
T Consensus       208 P~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~l  241 (403)
T PF06838_consen  208 PTE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDL  241 (403)
T ss_dssp             GGG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHH
T ss_pred             ccc---cchhheeccceeCCCCCccCcCCEEechHHH
Confidence            333   589999999999666642223 444444444

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PTZ00376 aspartate aminotransferase; Provisional

Probab=97.59  E-value=0.00077  Score=66.21  Aligned_cols=161  Identities=11%  Similarity=-0.052  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEE--eCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEE
Q 021539          129 IQARNRALKHCG------LSEDEYLVLF--VPNYKEAMLMIGE---SYPFFKGNYYLTII-SEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvF--TsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~  196 (311)
                      .+.|+.||+++.      ++++  +|++  |.|+++|+.++..   .+ ..+||.|+... .+. . ....++..|++++
T Consensus        75 ~~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~-~-~~~~~~~~G~~~~  149 (404)
T PTZ00376         75 QSFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWP-N-HVNIFKSAGLNVK  149 (404)
T ss_pred             HHHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCch-h-HHHHHHHcCCcee
Confidence            378888998762      2333  4885  8999999887754   44 46899886322 221 1 2334556799999


Q ss_pred             EEeCCC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCccCcc--
Q 021539          197 AAPETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGEDQ--  267 (311)
Q Consensus       197 ~vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~~p--  267 (311)
                      .+|... ++..++.+.+++.++...  ..+.++.+  +++=||..++.+++.   + |+++++++++|-+=.-.-...  
T Consensus       150 ~v~l~~~~~~~~d~~~l~~~~~~~~--~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~  227 (404)
T PTZ00376        150 EYRYYDPKTKGLDFDGMLEDLRTAP--NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLD  227 (404)
T ss_pred             eccccCcccCCcCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHH
Confidence            999732 235688999988886421  11344443  344599999987653   3 578999999998732100000  


Q ss_pred             ------cCCCCCC-CcEEEEccccCcCCCC-CceEEEE
Q 021539          268 ------LALALHR-PDLVLCTLDNNTHAQP-LKITCLL  297 (311)
Q Consensus       268 ------ldl~~l~-~Dfl~~S~HK~l~G~P-~GiG~L~  297 (311)
                            ..+.... -=+++.|+=| .||.| -.+|.++
T Consensus       228 ~~~~~~~~~~~~~~~vi~i~SfSK-~~~~~GlRvG~~~  264 (404)
T PTZ00376        228 KDAYAIRLFAERGVEFLVAQSFSK-NMGLYGERIGALH  264 (404)
T ss_pred             HHHHHHHHHHhcCCcEEEEEeCCC-cccccccccceEE
Confidence                  0111111 1278889999 88833 2388874

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=97.58  E-value=0.0019  Score=66.59  Aligned_cols=164  Identities=14%  Similarity=0.051  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC-C---
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW-L---  203 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~-~---  203 (311)
                      +.+|.+.+|+.+|++.   .-..+.|+|.|+..+..+. ..+||.|+..-.-|.+....+.. .|+.-+++.... +   
T Consensus        72 i~eAqe~aA~~fgAd~---tyFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~glil-aGa~Pvyl~p~~np~~g  146 (557)
T COG1982          72 IKEAQELAARVFGADH---TYFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLIL-AGATPVYLEPSRNPLYG  146 (557)
T ss_pred             HHHHHHHHHHHhCCCc---eEEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHHH-cCCceEEecCCCCcccc
Confidence            3489999999999963   2455788889999998887 47899998665433222322222 366655643222 1   


Q ss_pred             -CcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC-----CCCCC
Q 021539          204 -DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL-----ALHRP  275 (311)
Q Consensus       204 -~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl-----~~l~~  275 (311)
                       -|-|+.+.+++.+.++..  ..+++.++-- --|+..++++|.+ +|..++++.+|-+|-+ -...-++     .+.+.
T Consensus       147 i~ggI~~~~~~~~l~~~~~--~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~-~~~~~~~l~~~~~~~~~  223 (557)
T COG1982         147 IIGGIPLETFKEALLAHPD--AEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPA-HFDFSPMLPESALNGGA  223 (557)
T ss_pred             ccCCCCHHHHHHHHHhChh--hheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcc-cccccccCcchhhhcCc
Confidence             245788999876654321  1144444422 4799999999965 7999999999999876 3222221     12578


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ||++=|.|| .+|+=+-.-.|.++.
T Consensus       224 ~~~tqS~HK-~l~alSQaS~iHv~~  247 (557)
T COG1982         224 DFVTQSTHK-LLAALSQASMIHVKD  247 (557)
T ss_pred             eEEEechhh-hhhhhhhhHHHhhCC
Confidence            999999999 877544455666664

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=97.56  E-value=0.00034  Score=69.72  Aligned_cols=199  Identities=17%  Similarity=0.116  Sum_probs=118.9

Q ss_pred             CccccccccchhHHHHhcCCCCcc---hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHH----h-cCCC-
Q 021539           97 NDLDKSQLEPSRLLDILSKKTSFK---GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIG----E-SYPF-  167 (311)
Q Consensus        97 ~~~~~~~~~~~~l~~~l~~~ss~~---G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~----~-s~~~-  167 (311)
                      .++|-..|... ++--.+|.+-|+   ..-..-+.+++-.++-+..|-+.. -+=||+||++-++.-+.    . .+|- 
T Consensus       110 ~glD~~~Lag~-wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~  187 (510)
T KOG0629|consen  110 SGLDPIGLAGE-WLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEV  187 (510)
T ss_pred             cCCCHHHHHHH-HHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchh
Confidence            45666666555 333334444443   111111223455555566676653 23589998887654322    2 1221 


Q ss_pred             C-CC-----CEEE-EccCcChHHHHHHHHhCC---cEEEEEeCCCCCcccCHHHHHhhhhcc-CCCCCceEEEEecc--c
Q 021539          168 F-KG-----NYYL-TIISEESDYIKGFAAQKE---SKVIAAPETWLDLRIKGSQLSQNFRRK-CKYTPKGLFSYPVV--V  234 (311)
Q Consensus       168 ~-~G-----d~Il-s~~eh~~~~~~~la~~~G---~~V~~vp~~~~~g~id~~~L~~~l~~~-~~~~~t~LVs~~~~--~  234 (311)
                      + .|     .-|+ +.-+.| -++...+.-.|   -.|+.|+.+. .|.+.+++|++.|-.. .+.-..-+|++++-  +
T Consensus       188 K~~Gm~~~p~lilFtSeesH-YSi~kaAa~lg~gtd~c~~v~t~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV  265 (510)
T KOG0629|consen  188 KTKGMFALPPLILFTSEESH-YSIKKAAAFLGLGTDHCIKVKTDE-RGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTV  265 (510)
T ss_pred             hhhhhhcCCcEEEEecccch-hhHHHHHHHhccCCceeEEecccc-cCccchHHHHHHHHHHHhcCCCCeEEEecCCcee
Confidence            1 22     2233 333323 22433344445   4677888886 7899999999777542 22112456777655  6


Q ss_pred             ccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC------CC-CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          235 NGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL------AL-HRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       235 tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl------~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      .|..-|+..|+. |.+++.++|||||=.- | .-++.      .- -++|.++-++|| +.|+|.-+++++.|.+-
T Consensus       266 ~GAFDdL~~iadiC~k~~lWmHvDAAwGG-g-lLmS~k~R~kl~Giera~SvtwnpHK-~~gaplqCsa~l~r~~g  338 (510)
T KOG0629|consen  266 LGAFDDLNGIADICEKHKLWMHVDAAWGG-G-LLMSRKHRHKLTGIERANSVTWNPHK-LMGAPLQCSAFLTREEG  338 (510)
T ss_pred             eeccCcHHHHHHHHHhcCEEEEeeccccc-c-cccChhhHhhccCccccCceeecHHH-hhcCcchhhHHHHHHHH
Confidence            899999999987 6889999999998443 2 22221      11 258999999999 88989888888777543

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=97.53  E-value=0.00095  Score=67.09  Aligned_cols=157  Identities=14%  Similarity=0.080  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKE---AMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTe---alnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.+-+.-|+++.|.+-..  .-.-.++|.   |+.++.+... ++++.|+ +..-|+.  ..++..+.-.|++|+.+|.+
T Consensus       112 lfe~Qs~i~eLTGmdvaN--aSlyd~atA~aEa~~ma~r~~~-~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~  188 (429)
T PF02347_consen  112 LFEYQSMICELTGMDVAN--ASLYDGATAAAEAMLMAVRATK-RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLD  188 (429)
T ss_dssp             HHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHT-T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BB
T ss_pred             HHHHHHHHHHhhCCCccC--CCCCChhHHHHHHHHHHHHhcc-cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccc
Confidence            457888899999985211  123346655   4544444322 2334554 5556773  34555566679999999887


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCcc-cCCCCCCCcEE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-LALALHRPDLV  278 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-ldl~~l~~Dfl  278 (311)
                      . ++..+        .++     +.-|.++.- ..|.+-++++|.+ +|++|+++++ ++-.. ...- -.-.++++|.+
T Consensus       189 ~-~~~~d--------~~~-----~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~-aL~~l~~Pge~GADI~  252 (429)
T PF02347_consen  189 E-DGTTD--------DDD-----TAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPN-ALGGLKSPGEYGADIV  252 (429)
T ss_dssp             T-TCSB---------STT-----EEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCC-GCCTC--GGGGT-SEE
T ss_pred             c-cCCcc--------ccC-----eEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHH-HHhCcCChhhcCccEE
Confidence            5 44443        222     344443322 6899999999976 6999999887 65443 2111 12245789999


Q ss_pred             EEccccCc-----CCCCCceEEEEEeCCCCcc
Q 021539          279 LCTLDNNT-----HAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       279 ~~S~HK~l-----~G~P~GiG~L~vr~~~~~~  305 (311)
                      +.+ ||.|     ||+| |.|++-+|++....
T Consensus       253 vg~-~Q~fg~p~~~GGP-~~G~~a~~~~l~r~  282 (429)
T PF02347_consen  253 VGE-HQTFGIPMGFGGP-GAGFFAVREDLVRQ  282 (429)
T ss_dssp             EEC-CTTTT---CCC-S---EEEEE-GGGGGG
T ss_pred             eeC-CCCCcccCCCCCC-CeeeEEEhhhhhhh
Confidence            555 7732     3446 89999999886544

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PLN02672 methionine S-methyltransferase

Probab=97.52  E-value=0.0034  Score=69.47  Aligned_cols=167  Identities=12%  Similarity=0.034  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-Cc
Q 021539          128 EIQARNRALKHCGLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-DL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-~g  205 (311)
                      .+..++.+++..|.+.+ +.+|++|+|+++++..+...+. .+||.|+...--... ....++..|+++..+|.+.. +-
T Consensus       736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl-~pGD~VLVp~PtY~~-Y~~~a~~~Ga~vv~Vpl~~e~gf  813 (1082)
T PLN02672        736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV-QEGGTLCFPAGSNGT-YVSAAKFLKANFRRIPTKSSDGF  813 (1082)
T ss_pred             HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc-CCCCEEEEeCCChHH-HHHHHHHcCCEEEEEecccccCC
Confidence            45777888888888654 2369999999999999888773 688988633211112 22335566999999998632 34


Q ss_pred             ccCHHHHHhhhhccCCCCCceE-EEEec-ccccchhcHHHHHH----HHHCCcEEEecccccC---ccCc--ccCCC---
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGL-FSYPV-VVNGTRYSMHWISE----AHRNAWHVLLDATGLV---FGED--QLALA---  271 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~L-Vs~~~-~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv---~G~~--pldl~---  271 (311)
                      .++.+.|++.+++..   ...+ ++.+. +=||.+++-+++.+    |+++|+++++|-+.+-   .+..  +.++.   
T Consensus       814 ~lD~d~Le~al~~~~---~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l  890 (1082)
T PLN02672        814 KLTAKTLASTLETVK---KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL  890 (1082)
T ss_pred             CCCHHHHHHHhccCC---CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence            678889998886521   1233 34453 56999999887633    5789999999998761   0211  11111   


Q ss_pred             -CCC---C--c-EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          272 -LHR---P--D-LVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       272 -~l~---~--D-fl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                       .+.   .  . +++.|+=| -|+.| |  +|+++..++
T Consensus       891 ~~~~~~sks~nVIvL~SfSK-kf~lp-GLRIGylIap~~  927 (1082)
T PLN02672        891 SRLKSSNPSFAVALLGGLST-ELLSG-GHEFGFLALNDS  927 (1082)
T ss_pred             HHhccccCCceEEEEeCcHH-hhccH-HHHheeEEeCCH
Confidence             111   1  1 35558888 67644 5  899987543

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=97.51  E-value=0.0032  Score=61.86  Aligned_cols=157  Identities=11%  Similarity=0.079  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCC---CCC-CEEE-EccCcChHHH--HHHH------H--
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPF---FKG-NYYL-TIISEESDYI--KGFA------A--  189 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~---~~G-d~Il-s~~eh~~~~~--~~la------~--  189 (311)
                      ..+.-+.++++++.  +  .+.|+.+++||+..++.-   +..   ..+ +.|+ ....+|...+  ..+.      .  
T Consensus        84 ~~~l~~~l~~~~~~--~--~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~  159 (403)
T PRK05093         84 ALRLAKKLIDATFA--E--RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF  159 (403)
T ss_pred             HHHHHHHHHhhCCC--C--EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence            34666777777654  2  499999999987765542   210   012 3454 3333452211  1110      0  


Q ss_pred             -hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchh-c----HHHHHH-HHHCCcEEEeccccc
Q 021539          190 -QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRY-S----MHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       190 -~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~-P----i~~I~~-a~~~g~~vlvDAaQs  261 (311)
                       .....+..+|.+      |.+++++.+.++     +++|.+ +.+.+|..+ |    +++|.+ |+++|+++++|=+|+
T Consensus       160 ~~~~~~~~~~~~~------d~~~l~~~l~~~-----~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~  228 (403)
T PRK05093        160 GPKPADITHVPFN------DLAAVKAVIDDH-----TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT  228 (403)
T ss_pred             CCCCCCcEEeCCC------CHHHHHHHhcCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence             001123333332      567888888643     445444 444454443 3    667755 799999999999988


Q ss_pred             CccCcc--c--CCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          262 VFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       262 v~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      -.|...  .  ......+|+++||  | -+| | |  +|+++.++++.+
T Consensus       229 g~g~~g~~~~~~~~~~~pdi~s~s--K-~l~-~-G~rig~vv~~~~i~~  272 (403)
T PRK05093        229 GMGRTGDLFAYMHYGVTPDILTSA--K-ALG-G-GFPIGAMLTTAEIAS  272 (403)
T ss_pred             CCCCCccchhhhhcCCCCCEEEec--c-ccc-C-CcceEEEEEcHHHHh
Confidence            214322  1  1223568987775  9 666 4 6  999998876543

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.50  E-value=0.0012  Score=65.60  Aligned_cols=172  Identities=14%  Similarity=0.119  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCC-CEEEEc-cCcChH--HHHHHHHhC---
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKG-NYYLTI-ISEESD--YIKGFAAQK---  191 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~G-d~Ils~-~eh~~~--~~~~la~~~---  191 (311)
                      .....+..+++++.+...  ...|.|+.++|||+..++.   .+.   -.+| .+|++. ..+|..  ....+....   
T Consensus        84 ~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~  161 (423)
T PRK05964         84 HEPAERLAQRLVALTPGG--LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMH  161 (423)
T ss_pred             CHHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccc
Confidence            334445666777776421  2259999999998876544   220   0122 456543 345521  111111110   


Q ss_pred             ----C--cEEEEEeCCCCC-cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          192 ----E--SKVIAAPETWLD-LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       192 ----G--~~V~~vp~~~~~-g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                          +  ..+..+|....+ ...+.+++++.+++..  .....|.+ +. + ..|.+.|    +++|.+ |+++|+++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~--~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~  239 (423)
T PRK05964        162 ALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA--GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIF  239 (423)
T ss_pred             ccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC--CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence                0  123344443211 1122677778886421  12344443 42 3 4677775    566655 6899999999


Q ss_pred             ccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          257 DATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      |-+|. + |..-    .+.....+|+++++  |++.| . -.+|+++.+++..+
T Consensus       240 DEv~tg~-gr~G~~~a~~~~~v~pDi~~~~--K~l~g-G~~p~~av~~~~~i~~  289 (423)
T PRK05964        240 DEIATGF-GRTGTLFACEQAGVSPDIMCLS--KGLTG-GYLPLAATLCTAEIFE  289 (423)
T ss_pred             echhhCC-CcCcchhHHHhcCCCCCeeeee--hhhhc-CcccceEEEEcHHHHH
Confidence            99996 3 4221    12333579999887  95544 3 24888888876544

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=97.42  E-value=0.0016  Score=62.94  Aligned_cols=159  Identities=13%  Similarity=0.059  Sum_probs=86.5

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEc-cCcChHHH--HHHHHh----CCc-----EEE
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTI-ISEESDYI--KGFAAQ----KES-----KVI  196 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~-~eh~~~~~--~~la~~----~G~-----~V~  196 (311)
                      +.+..+++.++.......++|++++++|+..+.... .+..++.|++. ..+|....  ..+...    .+.     .+.
T Consensus        71 ~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (377)
T PRK02936         71 SLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFT  150 (377)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCce
Confidence            345555555553211125999999999988776632 11223456533 34442111  111100    010     112


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecccccCccCc--c
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGED--Q  267 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~--p  267 (311)
                      .+|.+      +.+++++.+.++     +++|.+...  ..|...+    +++|.+ |+++|+++++|-+|.-.|..  +
T Consensus       151 ~~~~~------d~~~l~~~~~~~-----~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~  219 (377)
T PRK02936        151 HVPFN------DIKALKEVMNEE-----VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL  219 (377)
T ss_pred             EeCCC------CHHHHHHhccCC-----eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence            22221      467888888653     456665433  3455432    777755 68999999999998621432  2


Q ss_pred             cCC--CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          268 LAL--ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       268 ldl--~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +.+  ....+|.+  ++-| -+| + |  +|+++.+++..+
T Consensus       220 ~~~~~~~~~~di~--t~sK-~l~-~-G~~ig~v~~~~~~~~  255 (377)
T PRK02936        220 FAYEQFGLDPDIV--TVAK-GLG-N-GIPVGAMIGKKELGT  255 (377)
T ss_pred             hHHHhhCCCCcEE--EEcc-ccc-C-CCccEEEEEcHHHHh
Confidence            221  12457865  4689 666 3 5  788888766543

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=97.27  E-value=0.0097  Score=58.52  Aligned_cols=161  Identities=14%  Similarity=0.085  Sum_probs=90.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-----CCC-CEEEE-ccCcChHHH--HHHHHh----
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-----FKG-NYYLT-IISEESDYI--KGFAAQ----  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-----~~G-d~Ils-~~eh~~~~~--~~la~~----  190 (311)
                      .....+.-++++++++.  +  .+.|+++++||+..++... .+     ..| +.|++ ...+|...+  ..+...    
T Consensus        76 ~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~  151 (397)
T TIGR03246        76 NEPVLRLAKKLVDATFA--D--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYS  151 (397)
T ss_pred             CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence            34455778888888764  2  4999999999987765532 01     012 34553 334452211  111100    


Q ss_pred             C-----CcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecc
Q 021539          191 K-----ESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       191 ~-----G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDA  258 (311)
                      .     ...+..+|.+      |.+++++.+.++     +++|.+ +.+ ..|.+. |   +++|.+ |+++|+++++|=
T Consensus       152 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE  220 (397)
T TIGR03246       152 QGFAPLPGGIKHAPYN------DLAAAKALISDK-----TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDE  220 (397)
T ss_pred             cCCCCCCCceEEeCCC------CHHHHHHHhccC-----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence            0     0123333332      568888888643     455554 444 456553 3   566655 689999999999


Q ss_pred             cccCccCccc----CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQL----ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~  304 (311)
                      +|.-.|...-    ......+|++++  =|.+-| .|  +|+++.+++..+
T Consensus       221 v~tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lggG~p--igav~~~~~i~~  267 (397)
T TIGR03246       221 VQTGVGRTGELYAYMHYGVTPDILTS--AKALGGGFP--IGAMLTTTEIAA  267 (397)
T ss_pred             hhhcCCccccchhhhhcCCCCCEEEe--ehhhhCCcc--eeEEEEcHHHHH
Confidence            9942122211    111236898865  574532 23  788888876543

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=97.22  E-value=0.0074  Score=59.30  Aligned_cols=161  Identities=10%  Similarity=0.065  Sum_probs=91.2

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChH--HHHHHH----HhCCc-
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESD--YIKGFA----AQKES-  193 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~--~~~~la----~~~G~-  193 (311)
                      +......+.-++++++++.  +  .+.|+.++|||+..++.......| ++|++. ..+|..  ....+.    .+.++ 
T Consensus        63 ~~~~~~~~la~~l~~~~~~--~--~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~  138 (364)
T PRK04013         63 FEHEEKEEMLEELSKWVNY--E--YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFE  138 (364)
T ss_pred             cCCHHHHHHHHHHHhhcCC--C--EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCC
Confidence            3344455666778888764  2  399999999998876553221234 566533 334421  111100    01111 


Q ss_pred             ----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecccccC
Q 021539          194 ----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       194 ----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                          .+..+|.+      +.+.+++.+.++     ++.|.+ +.+ ..|.+. |   ++++.+ |+++|+++++|-+|.-
T Consensus       139 p~~~~~~~~~~~------d~~~l~~~i~~~-----~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG  207 (364)
T PRK04013        139 PLVPGFKHIPFN------DVEAAKEAITKE-----TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSG  207 (364)
T ss_pred             CCCCCcEEecCC------CHHHHHHHhcCC-----cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence                12333332      356777777643     344443 333 345554 3   777865 6999999999999982


Q ss_pred             --ccCc-ccCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCC
Q 021539          263 --FGED-QLALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKS  302 (311)
Q Consensus       263 --~G~~-pldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~  302 (311)
                        +|+. -...-...||++++  =|++-|+ |  +|+++.+++.
T Consensus       208 ~RtG~~~a~~~~gv~PDiv~~--gK~lggG~P--~~a~~~~~~~  247 (364)
T PRK04013        208 LRTGKFLAIEHYKVEPDIVTM--GKGIGNGVP--VSLTLTNFDV  247 (364)
T ss_pred             CCCCchhHHHhcCCCCCEEEe--cccccCCce--eEEEEecccc
Confidence              1321 01122356999998  4755543 4  6888888664

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=97.20  E-value=0.018  Score=57.19  Aligned_cols=169  Identities=11%  Similarity=0.009  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHcCCCC-CCCeEEEe-CCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHH----HhC--C---c
Q 021539          129 IQARNRALKHCGLSE-DEYLVLFV-PNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFA----AQK--E---S  193 (311)
Q Consensus       129 e~aR~~IA~~Lga~~-dey~VvFT-snaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la----~~~--G---~  193 (311)
                      .+.-+++++.+..+. ....+.|+ .+++||+..++.- ..+....+|++.. .+|..  ....+.    .+.  +   .
T Consensus        81 ~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~  160 (412)
T TIGR02407        81 REFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLS  160 (412)
T ss_pred             HHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCC
Confidence            344455555542221 11247775 8999988765442 1122334566433 34511  111111    011  1   1


Q ss_pred             EEEEEeCCCCC--cccCHHHHHhhhhccCCC-CCceEEEE-ecc-cccchh-cHH---HHHH-HHHCCcEEEeccccc-C
Q 021539          194 KVIAAPETWLD--LRIKGSQLSQNFRRKCKY-TPKGLFSY-PVV-VNGTRY-SMH---WISE-AHRNAWHVLLDATGL-V  262 (311)
Q Consensus       194 ~V~~vp~~~~~--g~id~~~L~~~l~~~~~~-~~t~LVs~-~~~-~tG~i~-Pi~---~I~~-a~~~g~~vlvDAaQs-v  262 (311)
                      .+..+|.....  ..-+.+.+++.+.+.... .....|.+ +.+ ..|.+. |-+   +|.+ |+++|+++++|-+|. +
T Consensus       161 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~  240 (412)
T TIGR02407       161 NVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC  240 (412)
T ss_pred             CeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence            23445542100  001355677777632110 11344444 333 467743 433   4544 689999999999997 3


Q ss_pred             ccCc----ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          263 FGED----QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       263 ~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                       |..    ..+.....||+++++  | .+| +.|  +|+++++++.
T Consensus       241 -GRtG~~~a~~~~~v~PDi~~~~--K-~lg-~~G~pigav~~~~~~  281 (412)
T TIGR02407       241 -GRTGTFFSFEPAGIEPDIVCLS--K-SIS-GYGLPLALTLIKPEL  281 (412)
T ss_pred             -CccchhHHhcccCCCCCEEEec--h-hcc-CCccceeEEEEchhh
Confidence             431    223344679999988  9 455 334  8999998775

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=97.18  E-value=0.0026  Score=62.69  Aligned_cols=172  Identities=14%  Similarity=0.066  Sum_probs=104.1

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhcCCCCCCCEEE---EccCcC-hHHHHHHHHhCCcE
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVP-NYKEAMLMIGESYPFFKGNYYL---TIISEE-SDYIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTs-naTealnlv~~s~~~~~Gd~Il---s~~eh~-~~~~~~la~~~G~~  194 (311)
                      |...-..+ .-++++.++.|+++|+.--|-.-+ +++-|+-.|-.++ +.++++|+   .+.+-| +.....  ..+.+.
T Consensus        80 Gne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal-l~Ph~RiMGLDLP~GGHLsHGy~T--~~kkIS  156 (477)
T KOG2467|consen   80 GNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL-LKPHERIMGLDLPSGGHLSHGYQT--PTKKIS  156 (477)
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh-cCCCCeeeeccCCCCCcccccccc--CCceee
Confidence            44433333 368999999999998754443332 4455554454454 56788886   233323 211100  011111


Q ss_pred             ---E--EEEe--CCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccC----
Q 021539          195 ---V--IAAP--ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLV----  262 (311)
Q Consensus       195 ---V--~~vp--~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv----  262 (311)
                         +  +..|  ++...|.||.|.|++....-   + .+|+.+....--...+..++.+ |-+.|+++++|.+|--    
T Consensus       157 a~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f---r-Pk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA  232 (477)
T KOG2467|consen  157 ATSIYFESMPYKVDPSTGYIDYDKLEKTATLF---R-PKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVA  232 (477)
T ss_pred             eeeeecccCceeeCCCCCceehHHHHHHHHhc---C-CcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHh
Confidence               1  1123  55557899999998543321   1 2344433334667888999977 4789999999999964    


Q ss_pred             ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      .|.+|-.++  -+|.++-+-||++-| |.| |..+.|+...
T Consensus       233 A~vipsPFe--y~DiVTTTTHKsLRG-PRg-~mIFyRkGvk  269 (477)
T KOG2467|consen  233 AGVIPSPFE--YCDIVTTTTHKSLRG-PRG-AMIFYRKGVK  269 (477)
T ss_pred             cccCCCccc--ccceeeccccccccC-Ccc-eeEEEeccCC
Confidence            044444443  489999999998888 975 5566666543

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=97.15  E-value=0.014  Score=58.08  Aligned_cols=167  Identities=10%  Similarity=0.011  Sum_probs=87.7

Q ss_pred             HHHHHHHHHcCCCC-CCCeEEEe-CCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChH--HHHHHH----HhC--Cc--
Q 021539          130 QARNRALKHCGLSE-DEYLVLFV-PNYKEAMLMIGE---SYPFFKGNYYLTII-SEESD--YIKGFA----AQK--ES--  193 (311)
Q Consensus       130 ~aR~~IA~~Lga~~-dey~VvFT-snaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~--~~~~la----~~~--G~--  193 (311)
                      +.-+++++.+..+. .++.+.|+ .++|||+..++.   .+  ....+|++.. .+|..  ....+.    .+.  +.  
T Consensus        86 ~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~  163 (425)
T PRK09264         86 EFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV--TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPL  163 (425)
T ss_pred             HHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh--cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCC
Confidence            44445555543321 12247775 799998876544   33  2234565433 34411  111110    011  11  


Q ss_pred             -EEEEEeCCCCC-c-ccCHHHHHhhhhccCCC-CCceEEEE-ecc-cccchh----cHHHHHH-HHHCCcEEEecccccC
Q 021539          194 -KVIAAPETWLD-L-RIKGSQLSQNFRRKCKY-TPKGLFSY-PVV-VNGTRY----SMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       194 -~V~~vp~~~~~-g-~id~~~L~~~l~~~~~~-~~t~LVs~-~~~-~tG~i~----Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                       .+..+|..... . .-+.+++++.+...... .....|.+ +.+ ..|.+.    .+++|.+ |+++|+++++|-+|.-
T Consensus       164 ~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG  243 (425)
T PRK09264        164 NNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG  243 (425)
T ss_pred             CCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC
Confidence             34455543100 0 01456778888642100 12344444 333 467655    3667755 6999999999999962


Q ss_pred             ccC---c-ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          263 FGE---D-QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       263 ~G~---~-pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .|.   . ..+.....+|+++++  | -+| +.|  +|+++++++.
T Consensus       244 ~GrtG~~~~~~~~~v~PDi~t~~--K-~l~-~~G~pigav~~~~~i  285 (425)
T PRK09264        244 CGRTGTFFSFERAGITPDIVTLS--K-SIS-GYGLPMALVLIKPEL  285 (425)
T ss_pred             CccccHHHHHhhcCCCCCEEEec--c-ccC-CCccceEEEEEchhh
Confidence            132   1 223233579999997  9 555 435  5999998765

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=97.09  E-value=0.021  Score=57.30  Aligned_cols=76  Identities=12%  Similarity=0.149  Sum_probs=51.7

Q ss_pred             ceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc--cCCC--CCCCcEEEEccccCcCCCCCc
Q 021539          225 KGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ--LALA--LHRPDLVLCTLDNNTHAQPLK  292 (311)
Q Consensus       225 t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~G  292 (311)
                      ...|.+- .+ ..|.+.|    +++|.+ |+++|+++++|=+|. + |..-  +-..  ...+|+++++  |++.|+ ..
T Consensus       222 iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~-gr~G~~~a~~~~gv~pDivt~~--K~l~~G-~p  297 (441)
T PRK05769        222 VAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGM-GRTGKMFAIEHFGVEPDIITLA--KAIAGG-LP  297 (441)
T ss_pred             eEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcccceehhhccCCCCCEEEEc--ccccCC-cc
Confidence            4455543 33 4789999    888865 699999999999998 4 5433  1111  2458999887  745542 33


Q ss_pred             eEEEEEeCCCCc
Q 021539          293 ITCLLVRRKSFD  304 (311)
Q Consensus       293 iG~L~vr~~~~~  304 (311)
                      +|+++.+++..+
T Consensus       298 ~gav~~~~~i~~  309 (441)
T PRK05769        298 LGAVIGRAELMF  309 (441)
T ss_pred             cEEEEEehhhhh
Confidence            888998877653

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.00  E-value=0.02  Score=57.35  Aligned_cols=161  Identities=13%  Similarity=0.043  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCC--CCEEE-EccCcC--hHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK--GNYYL-TIISEE--SDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~--Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      -+=+.-|+++.|.+-..  --.-.++|.+-..+.-++...+  .+.++ +..-|+  .+.++..++-.|++|+..+.+  
T Consensus       123 fefQtlv~dLTGm~VAN--ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~--  198 (450)
T COG0403         123 FEFQTLVADLTGLDVAN--ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD--  198 (450)
T ss_pred             HHHHHHHHHHhCCCccc--chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc--
Confidence            46677899999985322  2223355554333333332333  35554 444566  456777677678888777664  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc-ccc-chhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNG-TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG-~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                          +.++|++. ...    .+.-+.+..- ..| ...++..|.+ +|++|++|+|=+=-...+... .-.++++|.++.
T Consensus       199 ----d~~~l~~~-~~~----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~-pPGe~GADIvvG  268 (450)
T COG0403         199 ----DLDDLESA-DDG----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLK-PPGEFGADIVVG  268 (450)
T ss_pred             ----hhhhhhhc-ccc----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccC-CccccCCceEEe
Confidence                45566665 321    1222222222 588 6677999855 799999876532111101111 123478999999


Q ss_pred             ccccC----cCCCCCceEEEEEeCCCCc
Q 021539          281 TLDNN----THAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~----l~G~P~GiG~L~vr~~~~~  304 (311)
                      +++-.    -||+| ..|++-+|++...
T Consensus       269 ~~QrfGvPmgfGGP-hag~fA~~~~~~R  295 (450)
T COG0403         269 SAQRFGVPMGFGGP-HAGYFAVKDEFKR  295 (450)
T ss_pred             cCcccCCCcCCCCc-ceeeeeEhHhHhh
Confidence            99982    24445 5788988877643

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=96.99  E-value=0.0096  Score=59.31  Aligned_cols=164  Identities=13%  Similarity=0.066  Sum_probs=96.8

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCC-CCEEEEcc-CcChH-------HHHHHHHhC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFK-GNYYLTII-SEESD-------YIKGFAAQK  191 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~-Gd~Ils~~-eh~~~-------~~~~la~~~  191 (311)
                      .....++.-+.+.++.+ ..+  .|.|+.++|||+..++.   -+...+ ..+|++.. ..|..       .+.. ..++
T Consensus        82 ~~~~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~-ky~~  157 (404)
T COG4992          82 YNEPQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQP-KYRK  157 (404)
T ss_pred             CChHHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCCh-hhcc
Confidence            34444455566666665 223  49999999999876544   222111 23555332 33311       0111 0112


Q ss_pred             Cc-----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcHH----HHHH-HHHCCcEEEeccc
Q 021539          192 ES-----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSMH----WISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       192 G~-----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi~----~I~~-a~~~g~~vlvDAa  259 (311)
                      ++     .+..+|.+      |.+.++++++++     |.-|.+ +.+ +-|++.|-.    .+.+ |.++|+++++|=+
T Consensus       158 ~F~Pl~~g~~~vpfn------Di~al~~ai~~~-----taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV  226 (404)
T COG4992         158 GFGPLLPGFRHVPFN------DIEALEAAIDED-----TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV  226 (404)
T ss_pred             CCCCCCCCceecCCC------CHHHHHHHhccC-----eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc
Confidence            33     24556664      568999999875     455554 555 789887744    3444 6789999999999


Q ss_pred             ccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          260 GLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       260 Qsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      |.-.|..-    .......||.++..  |++.|+ -=+|+++.++...+.
T Consensus       227 QtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG-~PigA~la~~~~~~~  273 (404)
T COG4992         227 QTGLGRTGKLFAYEHYGVEPDILTLA--KALGGG-FPIGAMLATEEIASA  273 (404)
T ss_pred             ccCCCccchHHHHHHhCCCCCEEEee--ccccCC-ccceeeEEchhhhhc
Confidence            98433221    11223469998764  867654 338999998654443

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=96.96  E-value=0.0041  Score=61.93  Aligned_cols=184  Identities=14%  Similarity=0.153  Sum_probs=111.2

Q ss_pred             hhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC
Q 021539          107 SRLLDILSKKTSFKGNFISIPEIQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS  178 (311)
Q Consensus       107 ~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e  178 (311)
                      +...+.+.....|+|-.      .-|+.+|+|+.        .+|+  +||.|.|+|.|++++.--+. .+|+.++.+.-
T Consensus       108 ~~~f~~la~fqdy~Gl~------~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtP  178 (471)
T KOG0256|consen  108 QSSFDELAMFQDYHGLP------SFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCLA-DPGDAFLVPTP  178 (471)
T ss_pred             ccchhhHhhcccccCch------HHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHhc-CCCceeeecCC
Confidence            33455555556666654      45777777764        2444  49999999999999876653 47887653221


Q ss_pred             cChHHHHHHHHhCCcEEEEEeCCCCC-cccCHHHHHhhhhccCCC-CC-ceEEEE-ecccccchhcHHHHHH----HHHC
Q 021539          179 EESDYIKGFAAQKESKVIAAPETWLD-LRIKGSQLSQNFRRKCKY-TP-KGLFSY-PVVVNGTRYSMHWISE----AHRN  250 (311)
Q Consensus       179 h~~~~~~~la~~~G~~V~~vp~~~~~-g~id~~~L~~~l~~~~~~-~~-t~LVs~-~~~~tG~i~Pi~~I~~----a~~~  250 (311)
                      ...-..+.+.-+.|++++.+.....+ -+|+.+.|++++.+..+. .+ .+|+.. +++-.|+.++=+++..    +.++
T Consensus       179 yY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k  258 (471)
T KOG0256|consen  179 YYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK  258 (471)
T ss_pred             CCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc
Confidence            11111133323458888888765544 478889998877643211 11 244443 4445899999887632    5789


Q ss_pred             CcEEEecccccCc--cCccc-CCCC------CCCc--EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          251 AWHVLLDATGLVF--GEDQL-ALAL------HRPD--LVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       251 g~~vlvDAaQsv~--G~~pl-dl~~------l~~D--fl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      ++++++|=.=+.+  +...+ .+.+      +++|  -++-|.-| =||.| |  +|++|-.++
T Consensus       259 niHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK-D~Glp-GfRvGviYS~ne  320 (471)
T KOG0256|consen  259 NIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK-DFGLP-GFRVGVIYSNNE  320 (471)
T ss_pred             ceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc-ccCCC-ceEEEEEEecCh
Confidence            9999999754421  22211 1110      1222  35677788 78866 5  799987654

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=96.95  E-value=0.014  Score=57.47  Aligned_cols=162  Identities=13%  Similarity=0.085  Sum_probs=87.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CC---C-CCCCEEEEc-cCcChHH--HHHHHHhC---
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YP---F-FKGNYYLTI-ISEESDY--IKGFAAQK---  191 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~---~-~~Gd~Ils~-~eh~~~~--~~~la~~~---  191 (311)
                      .....+.-++++++++.  +  .|.|+.+++||+..++..   +.   . ..++.|++. ..+|...  ...+....   
T Consensus        80 ~~~~~~la~~l~~~~~~--~--~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~  155 (406)
T PRK12381         80 NEPVLRLAKKLIDATFA--D--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYS  155 (406)
T ss_pred             CHHHHHHHHHHHhhCCC--C--eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccc
Confidence            34445777788888754  3  499999999998765543   21   0 123456543 2344211  11111100   


Q ss_pred             -C-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccc-cchh----cHHHHHH-HHHCCcEEEecc
Q 021539          192 -E-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVN-GTRY----SMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       192 -G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~t-G~i~----Pi~~I~~-a~~~g~~vlvDA  258 (311)
                       +     ..+..+|.      -+.+.+++.+.++     ++.|.+ +.+.+ |.+.    .+++|.+ |+++|+++++|=
T Consensus       156 ~~~~~~~~~~~~~~~------~d~~~l~~~l~~~-----~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DE  224 (406)
T PRK12381        156 QDFAPLPPDIRHAAY------NDLNSASALIDDQ-----TCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDE  224 (406)
T ss_pred             cCCCCCCCCeeEeCC------CCHHHHHHhccCC-----eeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcc
Confidence             0     01222222      1467888888643     455554 34434 4332    3455644 689999999999


Q ss_pred             cccCccCcc--c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|.-.|...  +  ......+|++++|  |++.|+ --+|+++.++++.+
T Consensus       225 v~tG~gr~G~~~~~~~~~v~pDi~t~s--K~l~gG-~~ig~~~~~~~~~~  271 (406)
T PRK12381        225 VQTGVGRTGELYAYMHYGVTPDVLTTA--KALGGG-FPIGAMLTTEKCAS  271 (406)
T ss_pred             hhhCCCCCcchhhhHhhCCCCCEEEeh--hhhhCC-CceEEEEEcHHHHh
Confidence            995213321  1  1223468987665  944321 12888888876543

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=96.92  E-value=0.022  Score=55.16  Aligned_cols=142  Identities=17%  Similarity=0.073  Sum_probs=93.0

Q ss_pred             HHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHH----------HHhCCcEEEEEeCCCCC
Q 021539          135 ALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF----------AAQKESKVIAAPETWLD  204 (311)
Q Consensus       135 IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~l----------a~~~G~~V~~vp~~~~~  204 (311)
                      -|+.+|+...--..=|. |+|+|+..++.++ +++||+.++..+.+-+.+.+.          .+..|++...+|... +
T Consensus        74 yA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~-~  150 (416)
T COG4100          74 YAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTA-D  150 (416)
T ss_pred             HHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccccc-C
Confidence            47788885432223344 5689999999887 689999765555442222211          245688888899876 7


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccc----hhcHHHHHH----HHH--CCcEEEeccccc--CccCcccCCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGT----RYSMHWISE----AHR--NAWHVLLDATGL--VFGEDQLALAL  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~----i~Pi~~I~~----a~~--~g~~vlvDAaQs--v~G~~pldl~~  272 (311)
                      |.||.+.++..++++     |+|+.+.- +.|.    -++|.+|.+    +++  .++.++||-+=.  +--+.|.+   
T Consensus       151 gkiD~~~v~~~i~~~-----tkli~IQR-S~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~---  221 (416)
T COG4100         151 GKIDIQAVKTAISDR-----TKLIGIQR-SKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTH---  221 (416)
T ss_pred             CcccHHHHHHhcCcc-----ceEEEEEe-ccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccc---
Confidence            999999999999876     67887642 3442    234555544    333  589999997632  10123444   


Q ss_pred             CCCcEEEEccccCcCC
Q 021539          273 HRPDLVLCTLDNNTHA  288 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G  288 (311)
                      .++|.++.|.=|.-.|
T Consensus       222 vGaDliAGSLIKNpGG  237 (416)
T COG4100         222 VGADLIAGSLIKNPGG  237 (416)
T ss_pred             cchhhhccceeeCCCC
Confidence            4799999999994433

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=96.77  E-value=0.03  Score=56.48  Aligned_cols=167  Identities=10%  Similarity=0.029  Sum_probs=90.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCC-CEEEEcc-CcChH--HHHHHHH----hCC-
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKG-NYYLTII-SEESD--YIKGFAA----QKE-  192 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~G-d~Ils~~-eh~~~--~~~~la~----~~G-  192 (311)
                      .....+.-+++++++...  ...+.|+.++|||+..++.   .+.-..| ..|++.. .+|..  ....+..    +.+ 
T Consensus       116 ~~~~~~lAe~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~  193 (442)
T TIGR03372       116 DPLRALLAKTLAALTPGK--LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF  193 (442)
T ss_pred             CHHHHHHHHHHHHhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence            333445556666665432  2359999999998876544   3311123 3455433 34511  1111100    011 


Q ss_pred             ----cEEEEEeCCCCCcccCHHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539          193 ----SKVIAAPETWLDLRIKGSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       193 ----~~V~~vp~~~~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ  260 (311)
                          ..+..+|.+      |.+.+++.++... .......|.+ +.+ +-|.+.|    ++++.+ |+++|+++++|=+|
T Consensus       194 ~p~~~~~~~~p~~------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~  267 (442)
T TIGR03372       194 MPLLPGFHHVAFG------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ  267 (442)
T ss_pred             CCCCCCCEEeCCC------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc
Confidence                123344443      3455656554210 0112344444 333 4788888    888865 69999999999999


Q ss_pred             c-CccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          261 L-VFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       261 s-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      . + |..--    ......||++++  =|.+-|+  |  +|+++.+++..+
T Consensus       268 tG~-GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~P--igavv~~~~i~~  313 (442)
T TIGR03372       268 TGM-GRTGKMFACEHEGVQPDILCL--AKALGGGVMP--IGATIATEAVFS  313 (442)
T ss_pred             cCC-CccccchhhhhcCCCCCeeee--hhhhcCCccc--ceEEEecHHHHH
Confidence            5 3 43221    112246999885  5855542  4  788888877644

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=96.75  E-value=0.012  Score=58.19  Aligned_cols=162  Identities=15%  Similarity=0.076  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHHHhCCc--------
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFAAQKES--------  193 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la~~~G~--------  193 (311)
                      ....+.+++|++++... +  .|+||.++|||+..++.. ..+...++|++.. .+|.  ..+..+. ..+.        
T Consensus        88 ~~~~~lae~l~~~~~~~-~--~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~-~~~~~~~~~~~~  163 (423)
T TIGR00713        88 EAEILLAKEIISRVPSV-E--MVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKA-GSGAATLGLPTS  163 (423)
T ss_pred             HHHHHHHHHHHHhCCcc-c--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccc-cCcccccCCCCC
Confidence            34568899999988653 3  599999999998765542 1122345665432 2341  1111100 0010        


Q ss_pred             ---------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          194 ---------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       194 ---------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                               .+..+|.      -+.++|++.+++..  ..++.|.+ +.. .+|.+.|    +++|.+ |+++|+++++|
T Consensus       164 ~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~--~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D  235 (423)
T TIGR00713       164 PGVPEDFAKLTLVLPY------NDLEALEEVFEEYG--EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFD  235 (423)
T ss_pred             CCCCcccccceEEeCC------CCHHHHHHHHHHcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEE
Confidence                     0111121      15788888886321  12445544 333 4798888    456655 68999999999


Q ss_pred             ccccCccC--c-ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          258 ATGLVFGE--D-QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv~G~--~-pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      =+|.-...  . ........+|.+  ++=| .+| + |  +|+++.++++.+
T Consensus       236 Ev~~g~r~g~~~~~~~~~~~pDi~--t~sK-~l~-~-G~pig~v~~~~~i~~  282 (423)
T TIGR00713       236 EVMTGFRVALGGAQEYFGVEPDLT--TLGK-IIG-G-GLPVGAFGGRREIME  282 (423)
T ss_pred             ccccccccCcchhHHHhCCCcchh--hhhh-hhc-C-CCceeeeeEHHHHHH
Confidence            99962111  0 011123468865  4679 565 2 4  799998875543

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=96.74  E-value=0.023  Score=57.54  Aligned_cols=168  Identities=10%  Similarity=0.022  Sum_probs=90.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCC-CEEEEc-cCcCh--HHHHHHHHhCCc----
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKG-NYYLTI-ISEES--DYIKGFAAQKES----  193 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~G-d~Ils~-~eh~~--~~~~~la~~~G~----  193 (311)
                      .....+.-+++++++...  ...|.|+.++|||+..++.   .+.-.+| ..|++. ..+|.  .....+......    
T Consensus       123 ~~~~~~lae~L~~~~p~~--~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~  200 (459)
T PRK11522        123 DPLRAMLAKTLAALTPGK--LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF  200 (459)
T ss_pred             CHHHHHHHHHHHHhCCCC--CCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence            334445556666665432  2359999999999876544   3321223 345533 34451  111111100001    


Q ss_pred             -----EEEEEeCCCCCcccCHHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539          194 -----KVIAAPETWLDLRIKGSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ  260 (311)
                           .+..+|.+      +.+.+++.++... .......|.+ +.+ ..|.+.|    ++.+.+ |+++|+++++|=+|
T Consensus       201 ~~~~~~~~~~~~~------d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~  274 (459)
T PRK11522        201 MPLLPGFRHVPFG------NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ  274 (459)
T ss_pred             CCCCCCCcccCCC------CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce
Confidence                 12222221      4566777775310 0012334444 333 4788888    888865 69999999999999


Q ss_pred             cCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          261 LVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       261 sv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      .-.|..-    .......||++++  =|++-|+  |  +|+++.+++..+
T Consensus       275 tG~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~P--igav~~~~~i~~  320 (459)
T PRK11522        275 TGMGRTGKMFACEHENVQPDILCL--AKALGGGVMP--IGATIATEEVFS  320 (459)
T ss_pred             ecCCccchhhhhhccCCCCCEEEe--chhhhCCCcc--ceeEEEcHHHHH
Confidence            5113221    1122246998866  5845442  4  799999876543

>PRK06062 hypothetical protein; Provisional

Probab=96.71  E-value=0.042  Score=55.39  Aligned_cols=173  Identities=12%  Similarity=0.036  Sum_probs=91.7

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcC--hHHHHHHHH---hCC-----
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEE--SDYIKGFAA---QKE-----  192 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~--~~~~~~la~---~~G-----  192 (311)
                      .....+.-+++++++...-  ..|.|+.++|||+..++.- ..+.....|++.. .+|  ......+..   .+.     
T Consensus        94 ~~~~~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~  171 (451)
T PRK06062         94 NDARSEAARLIAERAPGDL--SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGR  171 (451)
T ss_pred             CHHHHHHHHHHHHhCCCCC--CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCC
Confidence            3334455555666654222  2599999999998765442 1122234565433 344  111111110   000     


Q ss_pred             cEEEEEeCCCCC-ccc----C-------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcE
Q 021539          193 SKVIAAPETWLD-LRI----K-------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWH  253 (311)
Q Consensus       193 ~~V~~vp~~~~~-g~i----d-------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~  253 (311)
                      ..+..++..... ...    +       .++|+++|+.. .......|.+ +.+ .-|.+.|    ++++.+ |+++|++
T Consensus       172 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l  250 (451)
T PRK06062        172 AGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE-GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV  250 (451)
T ss_pred             CCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence            012222211100 000    1       45677777532 1112344444 333 4788888    888865 7999999


Q ss_pred             EEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          254 VLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       254 vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++|=+|.-.|..-    .+.-...||++++  =|++-|+  |  +|+++.++++.+
T Consensus       251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~--gK~lggG~~P--igav~~~~~i~~  303 (451)
T PRK06062        251 LIADEVMAGFGRTGKWFAIEHFGVVPDLITF--AKGVNSGYVP--LGGVAISEAIAA  303 (451)
T ss_pred             EEeeccccCCCcCcHHHHHHhcCCCCCeeee--chhhhcCCcC--cEEEEEcHHHHH
Confidence            99999998325332    1222357998876  4845442  4  788888877654

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=96.61  E-value=0.019  Score=55.12  Aligned_cols=166  Identities=15%  Similarity=0.205  Sum_probs=104.6

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHH-----HHHHHhcCCCCCC---CEEEEc-cCcChHHHHHH
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVP-NYKEA-----MLMIGESYPFFKG---NYYLTI-ISEESDYIKGF  187 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTs-naTea-----lnlv~~s~~~~~G---d~Ils~-~eh~~~~~~~l  187 (311)
                      |+++......++++...+-+++|++ |.|.|+|.. |+|+-     +|+++    ++.|   |+|+|. ..  ..+..+ 
T Consensus        44 SHRsk~f~kii~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv~lNL~g----lK~g~~AdYiVTGsWS--~KA~~E-  115 (370)
T KOG2790|consen   44 SHRSKDFAKIINDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAVPLNLIG----LKHGRCADYVVTGSWS--AKAAEE-  115 (370)
T ss_pred             cccchhHHHHHHHHHHHHHHHHcCC-CceeEEEEeCCCcccccccchhhhc----cccCCccceEEecccc--HHHHHH-
Confidence            5567777788899999999999996 788999996 55654     45544    2334   456542 22  111222 


Q ss_pred             HHhCCcEEEEEe-CCC-CCccc-CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccC
Q 021539          188 AAQKESKVIAAP-ETW-LDLRI-KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLV  262 (311)
Q Consensus       188 a~~~G~~V~~vp-~~~-~~g~i-d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv  262 (311)
                      |++.|.--..+| ... ..|.| +.+.++  ++++     ...|=+.++  +-|+-.|  ++-.---+|+.+++|-+.-+
T Consensus       116 Akk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~d-----a~yvyyCaNETVHGVEf~--~~P~~~~~~~vlVaDmSSnf  186 (370)
T KOG2790|consen  116 AKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPD-----ASYVYYCANETVHGVEFD--FIPVNDPKGAVLVADMSSNF  186 (370)
T ss_pred             HHhhCCceEEeccccccccCcCCChhhcc--cCCC-----ccEEEEecCceeeceecC--CCCCCCCCCceEEEecccch
Confidence            444554323333 221 11233 222222  1222     246655666  3576433  12111246888999999999


Q ss_pred             ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                       -..|+|++.+  +.+....+| -.| |.|+.+.+||++++..
T Consensus       187 -lSrpvDvsk~--gvi~aGAQK-N~G-~aG~Tvvivr~dllg~  224 (370)
T KOG2790|consen  187 -LSRPVDVSKF--GVIFAGAQK-NVG-PAGVTVVIVRKDLLGN  224 (370)
T ss_pred             -hcCCccchhc--ceEEecccc-ccC-ccccEEEEEehhhhcc
Confidence             8899999865  678888999 888 9999999999998765

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=96.61  E-value=0.0011  Score=65.54  Aligned_cols=161  Identities=11%  Similarity=0.019  Sum_probs=95.5

Q ss_pred             HHHHHHHHcCCCCCCCeEEEeCCHHH-HHHHHHhcCCC-CCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC--CCCCc
Q 021539          131 ARNRALKHCGLSEDEYLVLFVPNYKE-AMLMIGESYPF-FKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE--TWLDL  205 (311)
Q Consensus       131 aR~~IA~~Lga~~dey~VvFTsnaTe-alnlv~~s~~~-~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~--~~~~g  205 (311)
                      .=..+.+.+|+.. -...+.+|-||. ++.+...++.- ..++.|+ +.++|.+. ... ...-|.+++.||.  ..+..
T Consensus        61 l~~d~~~~~G~~~-~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc-~ka-i~~AGl~~~vV~~~~~~d~l  137 (389)
T PF05889_consen   61 LVLDALRLAGLRS-VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC-FKA-IERAGLEPVVVENVLEGDEL  137 (389)
T ss_dssp             HHHHHHHHTTHTT-HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH-HHH-HHHTT-EEEEE-EEEETTEE
T ss_pred             HHHHHHHHcCCcc-ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccch-HHH-HHhcCCeEEEeeccCCCCee
Confidence            3345566788863 234677898887 34444444421 2456765 67777643 222 2334888888873  22233


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc-HHHHHH-HHHCCcEEEecccccC--------------ccCcc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS-MHWISE-AHRNAWHVLLDATGLV--------------FGEDQ  267 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv--------------~G~~p  267 (311)
                      ..+.+.+++.+++. + ....|..+++.  +-|..-| +++|++ |+++|++.++-.|=++              .|.+|
T Consensus       138 ~td~~~ie~~i~~~-G-~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvd  215 (389)
T PF05889_consen  138 ITDLEAIEAKIEEL-G-ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVD  215 (389)
T ss_dssp             EEHHHHHHHHHHHH-C-GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCS
T ss_pred             eccHHHHHHHHHHh-C-CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcc
Confidence            45677788888653 1 11345555655  5898888 999987 6999999999887443              27888


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEE
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLL  297 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~  297 (311)
                      ++++.++.||++-+|||.+.+ +.-.|++-
T Consensus       216 a~vqS~dkNF~VPvGgai~As-~~~~~i~~  244 (389)
T PF05889_consen  216 AFVQSTDKNFMVPVGGAIMAS-FDPSGILA  244 (389)
T ss_dssp             EEEEEHHHHHCEESSHEEEEE-SSHHHHHH
T ss_pred             eeeeecCCCEEecCCCcEEEe-cCHHHHHH
Confidence            888999999999999994444 53344433

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=96.55  E-value=0.007  Score=58.56  Aligned_cols=180  Identities=12%  Similarity=0.024  Sum_probs=95.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC------CC-CCCEEEEcc-CcC--hHHHHH----
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP------FF-KGNYYLTII-SEE--SDYIKG----  186 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~------~~-~Gd~Ils~~-eh~--~~~~~~----  186 (311)
                      .........+.-+++.+.++-  ....|.|+.++|||+..++.-..      .. ..+.|++.. .+|  ......    
T Consensus        54 ~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~  131 (339)
T PF00202_consen   54 SGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGN  131 (339)
T ss_dssp             TTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSS
T ss_pred             cceeccchhhhhhhhhhcccc--ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCC
Confidence            344444555666777777733  23369999999999876554221      11 224566443 344  111111    


Q ss_pred             --HHHhC---CcEEEEEeCCCCCc----ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHC
Q 021539          187 --FAAQK---ESKVIAAPETWLDL----RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRN  250 (311)
Q Consensus       187 --la~~~---G~~V~~vp~~~~~g----~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~  250 (311)
                        ..+..   ...+..+|......    .-..+.+++.+..... .....|.+ +.+ +.|.+.|    ++++.+ |+++
T Consensus       132 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~  210 (339)
T PF00202_consen  132 PPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA-DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH  210 (339)
T ss_dssp             THHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG-GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC-CcEEEEEEeccccccCccccccchhhehccccccc
Confidence              11111   12456677653111    0011122222221100 11333333 333 3566654    345544 6899


Q ss_pred             CcEEEecccccCccCcccCC----CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          251 AWHVLLDATGLVFGEDQLAL----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       251 g~~vlvDAaQsv~G~~pldl----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      |+++++|=+|.-.|..---+    ..+.||+++++  |++-|+ --+|++++++++.+..
T Consensus       211 gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~sav~~~~~i~~~~  267 (339)
T PF00202_consen  211 GILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPISAVLGSEEIMEAF  267 (339)
T ss_dssp             T-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSEEEEEEEHHHHTTS
T ss_pred             ccceecccccccccccCCccceecccccCcccccc--cchhhh-hhcccccccchhhccc
Confidence            99999999998424433222    23679999998  966665 4489999998776543

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=96.51  E-value=0.06  Score=55.25  Aligned_cols=90  Identities=19%  Similarity=0.173  Sum_probs=56.6

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCccc----CCCCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQL----ALALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pl----dl~~l~~Df  277 (311)
                      ++|++++.... ......|.+ +.+ ..|.+.|    ++++.+ |+++|+++++|=+| .+ |..--    +.....||+
T Consensus       247 ~~le~~l~~~~-~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf-GRtG~~~a~e~~gv~PDi  324 (504)
T PLN02760        247 DNLENLILKEG-PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF-GRLGTMFGCDKYNIKPDL  324 (504)
T ss_pred             HHHHHHHHhcC-CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC-cccchhhHHHhcCCCCcE
Confidence            45666664211 112344444 333 4788988    889866 69999999999999 45 54321    112245998


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCCcc
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSFDT  305 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~~  305 (311)
                      ++++  |++-|+  |  +|++++++++.+.
T Consensus       325 vtlg--K~lggG~~P--igAv~~~~~i~d~  350 (504)
T PLN02760        325 VSLA--KALSSAYMP--IGAVLVSPEISDV  350 (504)
T ss_pred             EEec--ccccCCccc--cceEeecHHHHhh
Confidence            7774  855442  4  7888888776553

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=96.50  E-value=0.063  Score=53.48  Aligned_cols=174  Identities=14%  Similarity=0.088  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEcc-CcChH--HHHHHH-----HhCC--
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTII-SEESD--YIKGFA-----AQKE--  192 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~-eh~~~--~~~~la-----~~~G--  192 (311)
                      ......+.-+++++++.-  ....|.|+.+++||+..++.-- .+.....|++.. .+|..  ....+.     .+.+  
T Consensus        84 ~~~~~~~la~~L~~~~~~--~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~  161 (433)
T PRK08117         84 YYESILKLAEELAEITPG--GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ  161 (433)
T ss_pred             CCHHHHHHHHHHHHhCCC--CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence            344445677778887732  2235999999999987655421 112224565432 34411  110110     0001  


Q ss_pred             ---cEEEEEeCCCCC----c-------ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCC
Q 021539          193 ---SKVIAAPETWLD----L-------RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNA  251 (311)
Q Consensus       193 ---~~V~~vp~~~~~----g-------~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g  251 (311)
                         ..+..+|.....    +       .-+.++++++++..........|.+ +.+ ..|.+.|    ++++.+ |+++|
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g  241 (433)
T PRK08117        162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG  241 (433)
T ss_pred             CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence               113344432100    0       0134556676653111112444444 333 4789988    888865 69999


Q ss_pred             cEEEecccccCccCcccC--CC--CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          252 WHVLLDATGLVFGEDQLA--LA--LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       252 ~~vlvDAaQsv~G~~pld--l~--~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +++++|=+|.-.|..---  ..  ...+|++  ++=| -+| + |  +|+++.+++..+
T Consensus       242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK-~lg-~-G~pigav~~~~~i~~  295 (433)
T PRK08117        242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAK-GIA-S-GLPLSAVVASKELME  295 (433)
T ss_pred             CEEEEecchhccCccccchhHhhcCCCCCEe--ehhh-hcc-C-CCcceeEEEcHHHHh
Confidence            999999998832332111  11  2357875  5569 555 2 4  788888876543

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=96.49  E-value=0.021  Score=56.94  Aligned_cols=167  Identities=11%  Similarity=0.019  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHHH------h----C
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFAA------Q----K  191 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la~------~----~  191 (311)
                      ....+.++++++.+. ..+  .|.||.+++||+..++.. ..+..++.|++.. .+|..  ....+..      .    .
T Consensus        90 ~~~~~la~~L~~~~~-~~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~  166 (426)
T PRK00062         90 ELEVELAELVIELVP-SIE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP  166 (426)
T ss_pred             HHHHHHHHHHHHhCC-CCC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence            334567777777653 123  499999999998876663 1122345665433 34421  1111100      0    0


Q ss_pred             CcEE----EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539          192 ESKV----IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       192 G~~V----~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      +...    ....+..    -+.+++++.+.+..  ..+..|.+- .. ..|.+.|    +++|.+ |+++|+++++|=+|
T Consensus       167 ~~~~~~~~~~~~~~~----~d~~~l~~~i~~~~--~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~  240 (426)
T PRK00062        167 GVPEDFAKHTLTAPY----NDLEAVEELFEEYG--DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM  240 (426)
T ss_pred             CCCcccccceEEcCC----CCHHHHHHHHHhCC--CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence            1100    0111111    15678888886421  124555554 33 5899988    778855 68999999999999


Q ss_pred             cCccCcc---cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          261 LVFGEDQ---LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       261 sv~G~~p---ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .-.....   .+.-...+|++++  -|.+.++ --+|+++.++++.+
T Consensus       241 ~G~r~g~~~~~~~~~~~pDi~~~--gK~l~~G-~p~ga~~~~~~i~~  284 (426)
T PRK00062        241 TGFRVALGGAQGYYGVTPDLTTL--GKIIGGG-LPVGAFGGRREIME  284 (426)
T ss_pred             hccccCCccHHHHhCCCcchHhh--hhHhhCC-CcceeeeEHHHHHH
Confidence            7311111   1111235887655  5944332 11788887765443

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=96.30  E-value=0.13  Score=51.74  Aligned_cols=165  Identities=12%  Similarity=0.041  Sum_probs=87.0

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcCh---HHHHHHHH-----hC--C--c
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEES---DYIKGFAA-----QK--E--S  193 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~---~~~~~la~-----~~--G--~  193 (311)
                      +.=+++++.+...-  ..|.|+.++|||+..++.   .+  .....|++.. .+|.   ..+ .+..     +.  +  .
T Consensus        88 ~la~~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~  162 (443)
T PRK08360         88 LLAEKLIEIAPGDN--PKVSFGLSGSDANDGAIKFARAY--TKRRKILSYLRSYYGSTYGAM-SLTGLDFPVRALVGELS  162 (443)
T ss_pred             HHHHHHHHhCCCCC--CEEEEcCCHHHHHHHHHHHHHHh--cCCCeEEEEeCCcCCcCHHHH-HhcCCCcccccCCCCCC
Confidence            44444666665422  259999999998876544   33  2234565433 3441   111 1100     00  1  1


Q ss_pred             EEEEEeCCCCC----cc-------cCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEE
Q 021539          194 KVIAAPETWLD----LR-------IKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVL  255 (311)
Q Consensus       194 ~V~~vp~~~~~----g~-------id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vl  255 (311)
                      .+..+|.....    +.       -+.+.+++.+........++.|.+ +.+ .+|.+.|    +++|.+ |+++|++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI  242 (443)
T PRK08360        163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLV  242 (443)
T ss_pred             CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence            23444432100    00       112345555643111112444444 543 5898887    556654 689999999


Q ss_pred             ecccccCccCccc----CCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          256 LDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       256 vDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +|=+|.-.|...-    ......+|++++  =| -+| + |  +|+++.++++.+
T Consensus       243 ~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK-~l~-~-G~pigav~~~~~i~~  292 (443)
T PRK08360        243 VDEVQSGLGRTGKWFAIEHFGVEPDIITL--GK-PLG-G-GLPISATIGRAEIMD  292 (443)
T ss_pred             EeccccCCCcCccchhhhhcCCCCCEEEe--cc-ccc-C-CceeEEEEEcHHHHh
Confidence            9999873243221    112356898876  69 555 2 4  899988866543

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=96.18  E-value=0.15  Score=51.07  Aligned_cols=76  Identities=16%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC-CCc
Q 021539          225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ-PLK  292 (311)
Q Consensus       225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~-P~G  292 (311)
                      ...|.+ +.+ ..|.+.|    +++|.+ |+++|+++++|=+|.-.|..-    ...-...||.++++  |++-|+ |  
T Consensus       220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~P--  295 (443)
T PRK06058        220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAGGLP--  295 (443)
T ss_pred             eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccCCCc--
Confidence            344433 333 4576765    667755 689999999999987214322    11122468999997  955432 3  


Q ss_pred             eEEEEEeCCCCc
Q 021539          293 ITCLLVRRKSFD  304 (311)
Q Consensus       293 iG~L~vr~~~~~  304 (311)
                      +|+++.++++.+
T Consensus       296 i~av~~~~~i~~  307 (443)
T PRK06058        296 LSAVTGRAEIMD  307 (443)
T ss_pred             cEEEEEcHHHHh
Confidence            889999877654

>PRK06105 aminotransferase; Provisional

Probab=96.07  E-value=0.093  Score=53.08  Aligned_cols=89  Identities=16%  Similarity=0.234  Sum_probs=55.8

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Df  277 (311)
                      +++++.+... +......|.+ +.+ .-|.+.|    ++.+.+ |+++|+++++|=+|. + |..-    .+.....||+
T Consensus       205 ~~le~~~~~~-~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~-GRtG~~f~~~~~~v~PDi  282 (460)
T PRK06105        205 NELEALILAE-GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGF-GRTGNMFGCETFGIKPDI  282 (460)
T ss_pred             HHHHHHHHHc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCC-CcCchhhhHHhcCCCCCe
Confidence            5567766421 1112334443 333 4688877    777755 689999999999994 5 6431    2223356999


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      ++++  |++-|+  |  +|+++.++++.+
T Consensus       283 ~~~g--K~lggG~~P--~~av~~~~~i~~  307 (460)
T PRK06105        283 LVMS--KQLSSSYQP--LSAVLMNEKVYD  307 (460)
T ss_pred             eeee--cccccCccc--ceEEEEcHHHHH
Confidence            9875  755553  4  788888876544

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=96.03  E-value=0.36  Score=48.32  Aligned_cols=176  Identities=11%  Similarity=0.004  Sum_probs=88.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcChH--HHHHHH-----HhCCc--
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEESD--YIKGFA-----AQKES--  193 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~~--~~~~la-----~~~G~--  193 (311)
                      .....+.-+++++++.-.. ...|.|+.++|||+..++.- ..+.....|++.. .+|..  ....+.     .+.++  
T Consensus        82 ~~~~~~la~~l~~~~p~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~  160 (425)
T PRK07495         82 YENYVRLAERLNALVPGDF-AKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGA  160 (425)
T ss_pred             CHHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCC
Confidence            3333445555666654211 12599999999988765441 1122234565433 34411  111110     11111  


Q ss_pred             ---EEEEEeCCCCCcccC----HHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEeccc
Q 021539          194 ---KVIAAPETWLDLRIK----GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       194 ---~V~~vp~~~~~g~id----~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAa  259 (311)
                         .+..+|.......++    .+.+++.+...........|.+ +.+ ..|.+. |   +++|.+ |+++|+++++|=+
T Consensus       161 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv  240 (425)
T PRK07495        161 MMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEV  240 (425)
T ss_pred             CCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence               344555532111112    3445666642111112444444 333 467554 4   445544 6899999999999


Q ss_pred             ccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          260 GLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       260 Qsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |.-.|...    .+.....+|++++  =|++.|+ --+|++..+++..+
T Consensus       241 ~tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G-~pigav~~~~~i~~  286 (425)
T PRK07495        241 QTGFARTGKLFAMEHHEVAADLTTM--AKGLAGG-FPLAAVTGRAEIMD  286 (425)
T ss_pred             hhcCCcCCCceeecccCCCCCEEee--hhhhcCC-ccceEEEEcHHHHh
Confidence            87324332    1212246888777  4845432 12888988877654

>PRK07678 aminotransferase; Validated

Probab=95.91  E-value=0.11  Score=52.39  Aligned_cols=168  Identities=13%  Similarity=0.176  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC-C--CCC-CEEEEcc-CcCh--HHHHHHHH----hC-
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP-F--FKG-NYYLTII-SEES--DYIKGFAA----QK-  191 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~-~--~~G-d~Ils~~-eh~~--~~~~~la~----~~-  191 (311)
                      ...+.-++++++++..   ..|.|+.++|||+..++.   .+. .  ++| ..|++.. .+|.  .....+..    +. 
T Consensus        90 ~~~~lae~l~~~~~~~---~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~  166 (451)
T PRK07678         90 PAIKLAEKLNEWLGGE---YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYK  166 (451)
T ss_pred             HHHHHHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccc
Confidence            3445666777777542   259999999998876544   221 0  123 3565433 3441  11111100    00 


Q ss_pred             -C---cEEEEEeCCCCCccc---------C---HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HH
Q 021539          192 -E---SKVIAAPETWLDLRI---------K---GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AH  248 (311)
Q Consensus       192 -G---~~V~~vp~~~~~g~i---------d---~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~  248 (311)
                       +   ..+..+|... ..+.         +   .+.+++.|..... ....-|.+ +.+ ..|.+.|    ++++.+ |+
T Consensus       167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~  244 (451)
T PRK07678        167 YEPLAPGFLHVPPPD-CYRMPGIESEDIYDLECVKEIDRVMTWELS-ETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQ  244 (451)
T ss_pred             cCCCCCCCEEeCCCc-cccccccCChHHHHHHHHHHHHHHHHhcCC-CceEEEEEccccCCCCcccCCHHHHHHHHHHHH
Confidence             0   1223333211 0010         1   2335566652111 12333333 333 4677776    556655 68


Q ss_pred             HCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          249 RNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       249 ~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      ++|+++++|=+|. + |..-    ..--...||++++  =|++-|+  |  +|++.+++++.+
T Consensus       245 ~~g~llI~DEV~tGf-GRtG~~~~~~~~gv~PDivt~--gK~lggG~~P--i~av~~~~~i~~  302 (451)
T PRK07678        245 KHGALLISDEVICGF-GRTGKAFGFMNYGVKPDIITM--AKGITSAYLP--LSATAVKKEIYE  302 (451)
T ss_pred             HcCCEEEEeehhhcC-CcCchhHHHHhcCCCCCEEEe--ecccccCCcc--eeEEEEcHHHHH
Confidence            9999999999995 4 5421    1112346999988  4856543  5  899999887654

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=95.89  E-value=0.13  Score=51.70  Aligned_cols=171  Identities=13%  Similarity=0.060  Sum_probs=90.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCC-CCEEEEcc-CcChH---HH-----HHHH
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFK-GNYYLTII-SEESD---YI-----KGFA  188 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~-Gd~Ils~~-eh~~~---~~-----~~la  188 (311)
                      .....+.-+++++++...  ...|.|+.++|||+..++.   .+.   -.+ ..+|++.. .+|..   .+     ....
T Consensus        88 ~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~  165 (442)
T PRK13360         88 HPKAFELANRIAEIAPGG--LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNR  165 (442)
T ss_pred             CHHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhh
Confidence            344446666677776322  1259999999998776543   221   011 23565433 34411   11     0000


Q ss_pred             HhCC---cEEEEEeCCCC-C-ccc----------CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-
Q 021539          189 AQKE---SKVIAAPETWL-D-LRI----------KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-  246 (311)
Q Consensus       189 ~~~G---~~V~~vp~~~~-~-g~i----------d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-  246 (311)
                      +..+   ..+..+|.... . ..+          ..++|+++++.. .......|.+ +.. ..|.+.|    +++|.+ 
T Consensus       166 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~l  244 (442)
T PRK13360        166 KAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREI  244 (442)
T ss_pred             hccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence            0001   12333443210 0 000          135677777532 1112344444 333 4789988    888866 


Q ss_pred             HHHCCcEEEecccc-cCccCcc----cCCCCCCCcEEEEccccCcCC--CCCceEEEEEeCCCC
Q 021539          247 AHRNAWHVLLDATG-LVFGEDQ----LALALHRPDLVLCTLDNNTHA--QPLKITCLLVRRKSF  303 (311)
Q Consensus       247 a~~~g~~vlvDAaQ-sv~G~~p----ldl~~l~~Dfl~~S~HK~l~G--~P~GiG~L~vr~~~~  303 (311)
                      |+++|+++++|=+| .+ |..-    .+.....||++++  =|++-|  .|  +|+++.+++..
T Consensus       245 c~~~g~llI~DEv~tG~-GrtG~~~a~~~~gv~PDivt~--gK~l~gG~~P--~gav~~~~~i~  303 (442)
T PRK13360        245 CDKHGILLIFDEVITGF-GRLGAPFAAQYFGVTPDLLTC--AKGLTNGAIP--MGAVFVSSEIH  303 (442)
T ss_pred             HHHcCCEEEEechhhCC-CCCccchhhhhcCCCCceeee--eeccccCccc--eEEEEEcHHHH
Confidence            69999999999999 45 5421    1222346898876  585543  24  78888886653

>PRK12403 putative aminotransferase; Provisional

Probab=95.89  E-value=0.073  Score=53.83  Aligned_cols=170  Identities=11%  Similarity=0.055  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-----CCCCE-EEEccC-cChHHHHHH--HH---hC--C
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-----FKGNY-YLTIIS-EESDYIKGF--AA---QK--E  192 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-----~~Gd~-Ils~~e-h~~~~~~~l--a~---~~--G  192 (311)
                      ..+.-+++++++....+  .+.|+.++|||+..++.... +     ++++. |++... +|...+-.+  ..   .+  +
T Consensus       100 ~~~lae~L~~~~p~~~~--~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~  177 (460)
T PRK12403        100 VIELSELLFSLLPGHYS--HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG  177 (460)
T ss_pred             HHHHHHHHHHhCCCCcC--EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC
Confidence            34555667777753222  59999999999876554321 1     12233 444333 452211111  00   00  0


Q ss_pred             ---cEEEEEeCCCC-----C------cccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCC
Q 021539          193 ---SKVIAAPETWL-----D------LRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNA  251 (311)
Q Consensus       193 ---~~V~~vp~~~~-----~------g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g  251 (311)
                         ..+..+|....     +      .....+++++.+.+..+ .....|.+ +.+ ..|.+.|    ++.+.+ |+++|
T Consensus       178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~-~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g  256 (460)
T PRK12403        178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA-ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYD  256 (460)
T ss_pred             CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC-CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence               11223331100     0      00012445555532111 12334444 333 4688888    888865 69999


Q ss_pred             cEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          252 WHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       252 ~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++++|=+|...|..--    +.-...||++++  =|++-|+  |  +|+++.+++..+
T Consensus       257 ~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gK~lggG~~P--iga~v~~~~i~~  311 (460)
T PRK12403        257 VLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSI--AKGLTSGYVP--MGGLVLSKRIAE  311 (460)
T ss_pred             CEEEEeccccCCCcCchhhhhhhcCCCCCeEEE--cccccccccc--eEEEEECHHHHH
Confidence            99999999963243321    111246999985  5856553  5  788888876543

>PRK12566 glycine dehydrogenase; Provisional

Probab=95.82  E-value=0.086  Score=57.84  Aligned_cols=151  Identities=12%  Similarity=0.061  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHH---HHHHHHHhcCCCCCCCEE-EEccCcC--hHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYK---EAMLMIGESYPFFKGNYY-LTIISEE--SDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaT---ealnlv~~s~~~~~Gd~I-ls~~eh~--~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      -+-+.-|+++.|.+-..  --.-.++|   ||+.+..+.-. .+.+.+ ++..-|+  ...++..++..|++++.-    
T Consensus       127 ~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~-~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~----  199 (954)
T PRK12566        127 LNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAK-SKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD----  199 (954)
T ss_pred             HHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhh-cCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc----
Confidence            36677899999885221  11122333   55655443211 123455 4455566  345566666678887641    


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEec---ccccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccCCCCCCCcE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV---VVNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLALALHRPDL  277 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~---~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pldl~~l~~Df  277 (311)
                              ++++.+..+       ++++..   +..|.+.++++|.+ +|++|++++ +++-.+. +.+. .-.++++|+
T Consensus       200 --------~~~~~~~~~-------~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~-~Pge~GADI  262 (954)
T PRK12566        200 --------AVDNLAAHA-------VFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLT-PPGELGADV  262 (954)
T ss_pred             --------chhhcCCCC-------EEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCC-ChhhcCCcE
Confidence                    122333322       333322   26899999999955 799999854 4443320 1111 124579999


Q ss_pred             EEEccccC----cCCCCCceEEEEEeCCCCc
Q 021539          278 VLCTLDNN----THAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~----l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++.+++--    -||+| +.|++-++++...
T Consensus       263 ~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~R  292 (954)
T PRK12566        263 VLGSTQRFGVPMGYGGP-HAAYFACRDDYKR  292 (954)
T ss_pred             EeeCCCcCCCCCCCCCC-CeeeeeehHHHHh
Confidence            98887751    24557 7999998876543

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=95.80  E-value=0.071  Score=53.13  Aligned_cols=133  Identities=15%  Similarity=0.007  Sum_probs=79.9

Q ss_pred             hHHHHHHHHHHHHHcCCC----CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEE-E
Q 021539          125 SIPEIQARNRALKHCGLS----EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIA-A  198 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~----~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~-v  198 (311)
                      ++-++-.|+.||+++-..    .+..+|..|.||+.|++.++.-+--.+.+-|+.++ .++.-.. .++...+..|-+ +
T Consensus       112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsA-ti~l~~~~~v~YyL  190 (475)
T KOG0258|consen  112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSA-TISLLGGTQVPYYL  190 (475)
T ss_pred             ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHH-HHHHhCCcccceee
Confidence            344567999999998631    12235999999999998877655333445565444 3332111 111122444444 4


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCC-ceEEEE-ecccccchhcHHHHHH----HHHCCcEEEeccc
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTP-KGLFSY-PVVVNGTRYSMHWISE----AHRNAWHVLLDAT  259 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~-t~LVs~-~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAa  259 (311)
                      .... +=.+|.++|++.+.+..++.+ +.||++ +.+-||..+.-+-|..    |+++|..++-|=+
T Consensus       191 dEe~-~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV  256 (475)
T KOG0258|consen  191 DEES-NWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV  256 (475)
T ss_pred             cccc-CCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence            3321 123688899888876544433 345555 4557998887655532    5789999998865

>PRK07482 hypothetical protein; Provisional

Probab=95.80  E-value=0.13  Score=52.07  Aligned_cols=90  Identities=17%  Similarity=0.177  Sum_probs=53.5

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDL  277 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Df  277 (311)
                      .+.+++.+....+ ....-|.+ +.+ ..|.+.|    ++++.+ |+++|+++++|=+|.-.|..-    .+.-...||+
T Consensus       206 ~~~l~~~~~~~~~-~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDi  284 (461)
T PRK07482        206 ADELEELILAEGP-DTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDL  284 (461)
T ss_pred             HHHHHHHHHhcCC-CcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCE
Confidence            4567777753211 11333333 333 4677755    234544 689999999999998325332    1122346999


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCC
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSF  303 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~  303 (311)
                      ++++  |++-|+  |  +|+++++++..
T Consensus       285 v~~g--Kgl~gG~~P--i~av~~~~~i~  308 (461)
T PRK07482        285 ITVA--KGLTSAYAP--LSGSIVGEKVW  308 (461)
T ss_pred             EEEc--cccccCccc--cceeeecHHHH
Confidence            9984  856553  4  68888887653

>PRK06541 hypothetical protein; Provisional

Probab=95.78  E-value=0.11  Score=52.58  Aligned_cols=89  Identities=13%  Similarity=0.203  Sum_probs=56.3

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCcccC--C--CCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQLA--L--ALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pld--l--~~l~~Df  277 (311)
                      +.+++.+... .......|.+ +.+ ..|.+.|    +++|.+ |+++|+++++|=+| .+ |..---  .  ....+|+
T Consensus       208 ~~l~~~l~~~-~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGf-GR~G~~~a~~~~gv~PDi  285 (460)
T PRK06541        208 DRIEEAIEFE-GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAF-GRLGEMFGCERFGYVPDI  285 (460)
T ss_pred             HHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCchhhhhhhcCCCCCE
Confidence            5677777531 1112445544 333 5788888    788865 69999999999999 45 533221  1  1246999


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++  =|++-|+  |  +|+++.+++..+
T Consensus       286 vt~--gK~l~~G~~p--igav~~~~~i~~  310 (460)
T PRK06541        286 ITC--AKGITSGYSP--LGAMIASDRLFE  310 (460)
T ss_pred             EEe--cccccCCccc--eeEEEEcHHHHH
Confidence            875  5844432  4  899999876543

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=95.62  E-value=0.59  Score=46.59  Aligned_cols=171  Identities=11%  Similarity=0.069  Sum_probs=87.5

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHH-----HhCCc-----EE
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFA-----AQKES-----KV  195 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la-----~~~G~-----~V  195 (311)
                      +.-+++++++... ....+.|+.++|||+..++.- ..+.....|++.. .+|.  .....+.     .+.++     .+
T Consensus        87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~  165 (421)
T PRK09792         87 TLAEKINALAPVS-GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV  165 (421)
T ss_pred             HHHHHHHHhCCCC-CCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence            3334456655321 223599999999988765441 1122224565433 3441  1111110     01111     23


Q ss_pred             EEEeCCCCCccc----CHHHHHhhhhccCCCCCceEEEE-ecc-cccchh-c---HHHHHH-HHHCCcEEEecccccCcc
Q 021539          196 IAAPETWLDLRI----KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRY-S---MHWISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       196 ~~vp~~~~~g~i----d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~-P---i~~I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                      ..+|.......+    +.+.+++.++........+.|.+ +.+ ..|.+. |   +++|.+ |+++|+++++|=+|.-.|
T Consensus       166 ~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g  245 (421)
T PRK09792        166 YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA  245 (421)
T ss_pred             EEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence            344442111111    23677777763111112344444 333 478765 6   556654 689999999999988324


Q ss_pred             Ccc--cCCC--CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          265 EDQ--LALA--LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       265 ~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ..-  .-++  ...+|++++  =|++-|+ --+|+++.++++.+
T Consensus       246 r~G~~~a~~~~~~~pDi~t~--gK~l~~G-~pigav~~~~~i~~  286 (421)
T PRK09792        246 RTGKLFAMDHYADKPDLMTM--AKSLAGG-MPLSGVVGNANIMD  286 (421)
T ss_pred             CCCchhHHHhcCCCCcEEEe--ehhhcCC-CceEEEEEcHHHHh
Confidence            322  1122  246897665  5844432 22899998876544

>PLN02397 aspartate transaminase

Probab=95.62  E-value=0.2  Score=49.84  Aligned_cols=164  Identities=9%  Similarity=-0.029  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHcCCCCC----CCeE--EEeCCHHHHHHHHHhcC-CCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeC-
Q 021539          129 IQARNRALKHCGLSED----EYLV--LFVPNYKEAMLMIGESY-PFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPE-  200 (311)
Q Consensus       129 e~aR~~IA~~Lga~~d----ey~V--vFTsnaTealnlv~~s~-~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~-  200 (311)
                      .+.|+.|++++.-...    +..|  +-|.+++.+..++...+ .+.+||.|+...=..... ...++..|.++..+|. 
T Consensus        94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y-~~~~~~~g~~~~~v~l~  172 (423)
T PLN02397         94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNH-HNIFRDAGVPVRTYRYY  172 (423)
T ss_pred             HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhH-HHHHHHcCCeEEEeecc
Confidence            3688888887742210    1123  22344444433322211 124899886322111122 2334556999988886 


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEeccccc-Cc-cC-----cc
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGL-VF-GE-----DQ  267 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQs-v~-G~-----~p  267 (311)
                      +.++..+|.+.+.+.++...  .++.++.+  +++=||.+++.+++.   + |+++|++++.|=+=. ++ +.     .+
T Consensus       173 ~~~~~~~d~~~l~~~l~~~~--~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~  250 (423)
T PLN02397        173 DPKTRGLDFDGLLEDLKAAP--DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQS  250 (423)
T ss_pred             cCcCCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHH
Confidence            22234578888877776321  12455554  344699999987763   2 478999999997632 10 10     01


Q ss_pred             c-CCCCCCC-cEEEEccccCcCCCCCc--eEEEE
Q 021539          268 L-ALALHRP-DLVLCTLDNNTHAQPLK--ITCLL  297 (311)
Q Consensus       268 l-dl~~l~~-Dfl~~S~HK~l~G~P~G--iG~L~  297 (311)
                      + .+...+. =+++.|+=| .|| +.|  +|+++
T Consensus       251 ~~~~~~~~~~vI~~~SfSK-~~~-~~G~RvG~~v  282 (423)
T PLN02397        251 VRMFVEDGHEILVAQSYAK-NMG-LYGERVGALS  282 (423)
T ss_pred             HHHHHhcCCcEEEEEECcc-cCC-CccccceEEE
Confidence            1 1111111 256779999 888 556  68885

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=95.60  E-value=0.026  Score=57.05  Aligned_cols=116  Identities=10%  Similarity=0.053  Sum_probs=74.9

Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cccc--cchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VVVN--GTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~~t--G~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...+---|++.+.+|.+. +-.+..+.|++++.++....-+.++++. .-.|  -..-+|+++.. |+++|+++|||||
T Consensus       195 veka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAA  273 (511)
T KOG0628|consen  195 VEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAA  273 (511)
T ss_pred             HHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehh
Confidence            4433434478899999886 5678899999988865322112333332 1123  34466888865 6999999999998


Q ss_pred             cc----CccCcccCCCC-CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          260 GL----VFGEDQLALAL-HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       260 Qs----v~G~~pldl~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      =+    +|.-.+--++- -.+|-+.++.|||++- -..+-.||+|++
T Consensus       274 YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~v-nfDCs~lWvkd~  319 (511)
T KOG0628|consen  274 YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLV-NFDCSPLWVKDG  319 (511)
T ss_pred             hccccccCHHHHHHhhcchhhccccCChhheeEE-eeeeecceeecC
Confidence            66    21211111221 2489999999996554 457888999987

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=95.59  E-value=0.3  Score=49.18  Aligned_cols=167  Identities=14%  Similarity=0.109  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HH-HHHHHHh-CC-cEE-EEE-
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DY-IKGFAAQ-KE-SKV-IAA-  198 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~-~~~la~~-~G-~~V-~~v-  198 (311)
                      ..+.-+++.+.+...  ...|.|+.++|||+..+++- ..+.....|++.. .+|.  +. +..+.-. .. ... ... 
T Consensus        95 ~~~la~~L~~~~~~~--~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~  172 (433)
T PRK00615         95 EILFAEELFSYLGLE--DHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVD  172 (433)
T ss_pred             HHHHHHHHHHhCCCC--cCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCC
Confidence            334455566666432  23599999999988765441 1122224565433 2342  11 1111000 00 000 000 


Q ss_pred             --eCCCCCc---ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHH----HHHH-HHHCCcEEEecccccCccC-
Q 021539          199 --PETWLDL---RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMH----WISE-AHRNAWHVLLDATGLVFGE-  265 (311)
Q Consensus       199 --p~~~~~g---~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~----~I~~-a~~~g~~vlvDAaQsv~G~-  265 (311)
                        +......   --+.+++++.+....  .....|.+..+  ..|.+.|..    .|.+ |+++|+++++|=+|.  |- 
T Consensus       173 ~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t--G~R  248 (433)
T PRK00615        173 TDLAHPLTLSLPYNDFQIFQTVMNSLG--HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT--GFR  248 (433)
T ss_pred             CCCCCCCeEeCCCCCHHHHHHHHHhcC--CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc--ccc
Confidence              0000000   014678888886421  12445554333  368888854    6755 689999999999994  32 


Q ss_pred             -ccc---CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539          266 -DQL---ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD  304 (311)
Q Consensus       266 -~pl---dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~  304 (311)
                       ...   ......||++++  =|++-| +|  +|++..+++..+
T Consensus       249 ~G~~ga~~~~gv~PDi~~~--gK~lggG~p--~~av~~~~~i~~  288 (433)
T PRK00615        249 VAQGGAAAIYHVKPDITVY--GKILGGGLP--AAAVVAHKSIMD  288 (433)
T ss_pred             ccHhHHHHhcCCCCCeEEE--cccccCCcc--eeeeeecHHHHh
Confidence             110   111246999875  684543 24  788888877644

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=95.54  E-value=0.14  Score=51.67  Aligned_cols=89  Identities=11%  Similarity=0.197  Sum_probs=55.5

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCc--c--cCCCCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGED--Q--LALALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~--p--ldl~~l~~Df  277 (311)
                      +++++.++.. +......|.+ +.+ ..|.+.|    ++++.+ |+++|+++++|=+|. + |..  .  .+.....||+
T Consensus       205 ~~l~~~i~~~-~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~-GRtG~~~~~~~~gv~PDi  282 (445)
T PRK09221        205 DDLERLVALH-DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGF-GRLGAAFAAERFGVTPDI  282 (445)
T ss_pred             HHHHHHHHhc-CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC-CcCchhhHHHhcCCCCCE
Confidence            4667777532 1112444444 333 5799999    888866 699999999999995 4 531  1  1222246898


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      ++++  |++-|+  |  +|+++.+++..+
T Consensus       283 ~~~g--K~l~gG~~P--i~av~~~~~i~~  307 (445)
T PRK09221        283 ITFA--KGLTNGAIP--MGAVIASDEIYD  307 (445)
T ss_pred             EEec--cccccCccc--ceeeEEcHHHHH
Confidence            8776  634432  4  788888876543

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=95.54  E-value=0.57  Score=47.61  Aligned_cols=170  Identities=11%  Similarity=0.038  Sum_probs=90.0

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEccC-cC--hHHHHHHH-----HhCC-----cEE
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTIIS-EE--SDYIKGFA-----AQKE-----SKV  195 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~~e-h~--~~~~~~la-----~~~G-----~~V  195 (311)
                      +.=+++.+++-.+ ....+.|+.++|||+..++.-- ....+..|++... .|  ......+.     .+.|     ..|
T Consensus       103 ~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v  181 (447)
T COG0160         103 ELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGV  181 (447)
T ss_pred             HHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCe
Confidence            3334445544442 2345999999999988765421 1123345665443 44  11111111     1111     236


Q ss_pred             EEEeCCCCCc-----------ccCHHHHHhhhhcc-CCCCCceEEEE-ecc-cccchhc-HHH---HHH-HHHCCcEEEe
Q 021539          196 IAAPETWLDL-----------RIKGSQLSQNFRRK-CKYTPKGLFSY-PVV-VNGTRYS-MHW---ISE-AHRNAWHVLL  256 (311)
Q Consensus       196 ~~vp~~~~~g-----------~id~~~L~~~l~~~-~~~~~t~LVs~-~~~-~tG~i~P-i~~---I~~-a~~~g~~vlv  256 (311)
                      ..+|...+..           .-..+.+++++... .......-+.+ +.+ +-|.+.| -.+   +.+ |+++|+++++
T Consensus       182 ~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~  261 (447)
T COG0160         182 YHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIA  261 (447)
T ss_pred             EEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            6666532111           11234455544432 11112222332 444 5787765 334   433 6899999999


Q ss_pred             cccccCccCcc--cCCC--CCCCcEEEEccccCcCCC-CCceEEEEEeCCCCc
Q 021539          257 DATGLVFGEDQ--LALA--LHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQsv~G~~p--ldl~--~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~  304 (311)
                      |=+|+-+|..-  +-++  ...||.++++  |.+-|+ |  +|+++.|++..+
T Consensus       262 DEVQtG~GRTG~~fa~E~~gv~PDivt~a--K~ig~G~P--l~avv~r~ei~~  310 (447)
T COG0160         262 DEVQTGFGRTGKMFAFEHFGVEPDIVTLA--KSLGGGLP--LSAVVGRAEIMD  310 (447)
T ss_pred             eccccCCCccccchhhhhcCCCCCEEEec--ccccCCCc--eeEEeccHHhcc
Confidence            99998544332  1122  2359999987  755542 4  888999988766

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.52  E-value=0.05  Score=55.00  Aligned_cols=159  Identities=13%  Similarity=0.132  Sum_probs=97.8

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPN-YKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsn-aTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .++-+.+|+|+|+. +-  ++|--| +|-++|+  -++ ..+|..|+|.--.|.+ ++.-|+-.|+.++...-+      
T Consensus       185 kelE~l~A~f~g~e-~a--~vF~mGf~TNs~~~--p~l-~~~gsLIiSDelNHaS-i~~GaRLSgAtiRVfkHN------  251 (519)
T KOG1357|consen  185 KELEELVARFLGVE-DA--IVFSMGFATNSMNI--PSL-LGKGSLIISDELNHAS-LITGARLSGATTRVFRHN------  251 (519)
T ss_pred             HHHHHHHHHhcCCc-ce--EEEeccccccccCc--cee-ecCCcceeeccccchh-eeccccccCceEEEEecC------
Confidence            47888899999995 33  888765 2323322  222 3577777764433322 322244568888887764      


Q ss_pred             CHHHHHhhhhc-------cCCCC-CceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------
Q 021539          208 KGSQLSQNFRR-------KCKYT-PKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------  267 (311)
Q Consensus       208 d~~~L~~~l~~-------~~~~~-~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------  267 (311)
                      +..+|++.|++       ++..- ++.+|++-..  .-|.+-.+.+|.+ .+++.+++++|.+|++ |...         
T Consensus       252 dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSi-GA~g~tGrgvce~  330 (519)
T KOG1357|consen  252 DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSI-GAMGATGRGVCEY  330 (519)
T ss_pred             CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccc-cccCCCCcceeec
Confidence            23455555542       22111 1234444333  3799999988855 5889999999999999 8762         


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .-++..++|.+-.++-| .||+  +-|.+--+++..+
T Consensus       331 ~g~d~~dvDImMGtftK-Sfga--~GGyiagsk~lid  364 (519)
T KOG1357|consen  331 FGVDPEDVDIMMGTFTK-SFGA--AGGYIAGSKELID  364 (519)
T ss_pred             cCCCchhheeecceehh-hccc--ccceecCcHHHHh
Confidence            12444679999999999 8873  3344444444433

>PRK07480 putative aminotransferase; Validated

Probab=95.52  E-value=0.21  Score=50.50  Aligned_cols=66  Identities=14%  Similarity=0.127  Sum_probs=46.1

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRK  301 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~  301 (311)
                      ..|.+.|    ++.+.+ |+++|+++++|=+|. + |..-    .+.....||+++++  |++-|+  |  +|+++++++
T Consensus       231 ~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~P--i~av~~~~~  305 (456)
T PRK07480        231 AGGVIIPPATYWPEIQRICRKYDILLVADEVICGF-GRTGEWFGSQHFGIKPDLMTIA--KGLTSGYIP--MGAVGVGDR  305 (456)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCcchhhhhhcCCCCCeeeee--hhhccCCcc--ceEEEEcHH
Confidence            4688877    667755 689999999999996 4 5332    12223569998874  855552  4  789999877


Q ss_pred             CCc
Q 021539          302 SFD  304 (311)
Q Consensus       302 ~~~  304 (311)
                      ..+
T Consensus       306 i~~  308 (456)
T PRK07480        306 VAE  308 (456)
T ss_pred             HHH
Confidence            644

>PRK05965 hypothetical protein; Provisional

Probab=95.39  E-value=0.29  Score=49.49  Aligned_cols=90  Identities=14%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-cccchhcH----HHHHH-HHHCCcEEEecccccCccCcc--c--CCCCCCCcEE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSM----HWISE-AHRNAWHVLLDATGLVFGEDQ--L--ALALHRPDLV  278 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi----~~I~~-a~~~g~~vlvDAaQsv~G~~p--l--dl~~l~~Dfl  278 (311)
                      +.+++.+.... .....-|.+ +.+ ..|.+.|=    +.+.+ |+++|+++++|=+|.-.|..-  +  +.-...||++
T Consensus       202 ~~l~~~i~~~~-~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv  280 (459)
T PRK05965        202 AALRAKVAELG-ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM  280 (459)
T ss_pred             HHHHHHHHhcC-CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence            45677775321 012333333 433 46776653    34544 689999999999998325332  1  1122469999


Q ss_pred             EEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          279 LCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       279 ~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++  |++-|+  |  +|++++++++.+
T Consensus       281 ~~g--Kgl~gG~~P--i~av~~~~~i~~  304 (459)
T PRK05965        281 TVA--KGLTSGYVP--MGAVLMSDHVYQ  304 (459)
T ss_pred             Eec--hhhccCCcc--eeEEEEcHHHHH
Confidence            985  756554  5  899999887653

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=95.25  E-value=0.85  Score=45.92  Aligned_cols=172  Identities=11%  Similarity=0.068  Sum_probs=88.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcChH--HHHHHHH-----hC--
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEESD--YIKGFAA-----QK--  191 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~~~--~~~~la~-----~~--  191 (311)
                      .....+.-+++++++.... ...|.|+.++|||+..++.   .+  .....|++.. .+|..  ....+..     +.  
T Consensus        84 ~~~~~~lae~L~~~~p~~~-~~~v~f~~SGseA~e~AiklAr~~--tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~  160 (445)
T PRK08593         84 HEPLVRLAKKLCELAPGDF-EKRVTFGLSGSDANDGIIKFARAY--TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY  160 (445)
T ss_pred             CHHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHh--hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence            3444456666777664321 1359999999999876554   33  2223455432 34411  1111110     00  


Q ss_pred             C---cEEEEEeCCCCC----cccC-------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHC
Q 021539          192 E---SKVIAAPETWLD----LRIK-------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRN  250 (311)
Q Consensus       192 G---~~V~~vp~~~~~----g~id-------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~  250 (311)
                      +   ..+..+|.....    +..+       .+++++.+........+..|.+ +.+ ..|.+.|    +++|.+ |+++
T Consensus       161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~  240 (445)
T PRK08593        161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH  240 (445)
T ss_pred             CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence            1   123344432110    0011       1334444432100012444444 333 4687777    777755 6899


Q ss_pred             CcEEEeccccc-CccCccc----CCCCCCCcEEEEccccCcCC-CCCceEEEEEeCCCCc
Q 021539          251 AWHVLLDATGL-VFGEDQL----ALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRKSFD  304 (311)
Q Consensus       251 g~~vlvDAaQs-v~G~~pl----dl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~  304 (311)
                      |+++++|=+|. + |..--    +.-...+|++++  =|++-| .|  +|+++.++++.+
T Consensus       241 g~llI~DEv~tg~-GrtG~~~a~~~~gv~pDi~t~--gK~l~~G~p--~gav~~~~~i~~  295 (445)
T PRK08593        241 GILFAVDDIQQGL-GRTGKWSSISHFNITPDLMSF--GKSLAGGMP--MSAIVGRKEIME  295 (445)
T ss_pred             CCEEEEechhhCC-CcCchHHHHHhcCCCCCEeee--cccccCCcc--cEEEEEcHHHHh
Confidence            99999999984 4 53221    111246898876  474443 23  888888876644

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=95.24  E-value=0.42  Score=47.70  Aligned_cols=161  Identities=17%  Similarity=0.094  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHHHh----------CCc-
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFAAQ----------KES-  193 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la~~----------~G~-  193 (311)
                      .+.-+++.+++.-   ...|.|+.++|||+..++.- ..+.....|++.. .+|.  .....+...          .|+ 
T Consensus        96 ~~la~~l~~~~p~---~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~  172 (428)
T PRK12389         96 IEFAKMLKEAIPS---LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVP  172 (428)
T ss_pred             HHHHHHHHHhCCC---CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCC
Confidence            4455555555531   22599999999998765441 1122234565433 3441  111111100          011 


Q ss_pred             -----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc
Q 021539          194 -----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs  261 (311)
                           .+..+|.+      +.+.+++.+....  .....|.+ +.+ ..|.+.|    ++++.+ |+++|+++++|=+|.
T Consensus       173 ~~~~~~~~~~~~~------d~~~l~~~l~~~~--~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t  244 (428)
T PRK12389        173 KSIAQEVITVPFN------DIEALKEALDKWG--DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT  244 (428)
T ss_pred             CcccCceEEcCCC------CHHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence                 11122221      4678888886421  12344444 333 4788888    888866 699999999999998


Q ss_pred             CccCccc---CCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCCc
Q 021539          262 VFGEDQL---ALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFD  304 (311)
Q Consensus       262 v~G~~pl---dl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~  304 (311)
                      -......   ..-...||++++  =|++-|+ |  +|++..+++..+
T Consensus       245 G~Rt~~~~a~~~~gv~PDivt~--gK~lggG~P--i~av~~~~~i~~  287 (428)
T PRK12389        245 AFRFMYGGAQDLLGVEPDLTAL--GKIIGGGLP--IGAYGGRKDIME  287 (428)
T ss_pred             ccccCcchhhHHhCCCCCeeee--chhhcCCCc--eeEEeEHHHHHh
Confidence            4121110   111246999766  5855432 3  788888876654

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=95.22  E-value=0.45  Score=48.20  Aligned_cols=168  Identities=16%  Similarity=0.116  Sum_probs=87.6

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEcc-CcC--h-HHHHHHHH----hCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTII-SEE--S-DYIKGFAA----QKE  192 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~-eh~--~-~~~~~la~----~~G  192 (311)
                      ......+.-+++++++....  ..|.|+++++||+..++.   .+  ....+|++.. .+|  . ..+ .+..    +.+
T Consensus       111 ~~~~~~~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~  185 (459)
T PRK06082        111 TNETAIECAEKLTEIAGGEL--NRVLFAPGGTSAIGMALKLARHI--TGNFKVVSLWDSFHGASLDAI-SVGGEACFRQG  185 (459)
T ss_pred             CCHHHHHHHHHHHHhCCCCC--CEEEECCCcHHHHHHHHHHHHHh--cCCCEEEEEeCCCcCccHHHH-hhcCCcccccC
Confidence            34444566666777765321  259999999998876543   33  2234565433 233  1 111 1110    000


Q ss_pred             -----cEEEEEeCCCC----Cccc------CHHHHHhhhhccCCCCCceEEEE-ecccccc-hhc---HHHHHH-HHHCC
Q 021539          193 -----SKVIAAPETWL----DLRI------KGSQLSQNFRRKCKYTPKGLFSY-PVVVNGT-RYS---MHWISE-AHRNA  251 (311)
Q Consensus       193 -----~~V~~vp~~~~----~g~i------d~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~-i~P---i~~I~~-a~~~g  251 (311)
                           ..+..+|....    ....      ..+++++.++.. +  ....|.+ +.+..|. ..|   ++++.+ |+++|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~--~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g  262 (459)
T PRK06082        186 MGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-G--GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHN  262 (459)
T ss_pred             CCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-C--CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcC
Confidence                 11233332100    0000      124567777532 1  2344443 2222354 345   567755 68999


Q ss_pred             cEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCC
Q 021539          252 WHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSF  303 (311)
Q Consensus       252 ~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~  303 (311)
                      +++++|=+|.-.|..--    ..-...||++++  =|++-|+  |  +|+++.+++..
T Consensus       263 ~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~P--~~av~~~~~i~  316 (459)
T PRK06082        263 VLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCI--GKGLGGGLVP--IAAMITKDKYN  316 (459)
T ss_pred             CEEEEechhhCCCccchhhHhHhhCCCCCEEEe--cccccCCCCc--ceEEEEcHHHH
Confidence            99999999883243211    112346999985  5856553  4  68888887653

>PLN00144 acetylornithine transaminase

Probab=95.11  E-value=0.41  Score=47.03  Aligned_cols=91  Identities=14%  Similarity=0.145  Sum_probs=55.2

Q ss_pred             CHHHHHhhhhccCCCCCceEEEE-ecccccchhc-----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYS-----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD  276 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~P-----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D  276 (311)
                      +++.|++.++..    ..+.|.+ +.+-.|.+++     ++++.+ |+++|+++++|=+|.-.|...    .+.....+|
T Consensus       155 d~~~l~~~~~~~----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD  230 (382)
T PLN00144        155 NLEAARKLIQKG----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD  230 (382)
T ss_pred             CHHHHHHhcCCC----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence            467788777532    2344444 4332243433     456654 689999999999988324332    124456799


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++++  =|.+.|+ --+|+++.+++..+.
T Consensus       231 i~t~--sK~l~~G-~pig~v~~~~~~~~~  256 (382)
T PLN00144        231 IMTL--AKPLAGG-LPIGAVLVTEKVASA  256 (382)
T ss_pred             EEEe--cccccCC-cceEEEEEcHHHHhc
Confidence            6665  5855432 228999998776543

>PRK07046 aminotransferase; Validated

Probab=95.02  E-value=0.47  Score=47.97  Aligned_cols=159  Identities=10%  Similarity=0.028  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEccC-cC--hH-HHHHHHH-----hC---Cc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTIIS-EE--SD-YIKGFAA-----QK---ES  193 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~e-h~--~~-~~~~la~-----~~---G~  193 (311)
                      ...+.-+.+.+.+++  +  .|.|+.++|||+..+++- ..+...+.|++..+ +|  .+ .+.....     +.   |.
T Consensus       116 ~~~~lAe~l~~~~~~--~--~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~  191 (453)
T PRK07046        116 DAAWVGEELARRFGL--P--YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ  191 (453)
T ss_pred             HHHHHHHHHHHHhCC--C--EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence            334555666676653  3  499999999998765442 11223355664332 34  12 1111100     00   11


Q ss_pred             ------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539          194 ------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       194 ------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ  260 (311)
                            .+..+|.+      |.+++++.+..+    ....|.+ +.+ ..|.+.|    ++.+.+ |+++|+++++|=+|
T Consensus       192 ~~~~~~~~~~~~~n------d~~~l~~~l~~~----~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~  261 (453)
T PRK07046        192 VHDLTATTRVVEFN------DLAALEAALADG----DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETH  261 (453)
T ss_pred             CccccCceEeeCCC------CHHHHHHHhCCC----CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc
Confidence                  11222221      567888888532    2344444 333 4677777    566755 68999999999999


Q ss_pred             c----CccCcccCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCCcc
Q 021539          261 L----VFGEDQLALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFDT  305 (311)
Q Consensus       261 s----v~G~~pldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~~  305 (311)
                      .    . |-.. ..-...||++++  =|.+-|+ |  +|++..|++..+.
T Consensus       262 tfr~g~-Gg~~-~~~gv~PDi~t~--gK~lggG~P--i~av~g~~~i~~~  305 (453)
T PRK07046        262 TISSGP-GGYT-RAHGLEPDFLVV--GKPIAGGVP--CAVYGFSAELAER  305 (453)
T ss_pred             cCccCC-cchh-HHhCCCccceee--hhhhcCCCc--ceeeeehHHHHHH
Confidence            5    3 3221 111346999986  5855543 4  8888888776543

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=94.98  E-value=0.14  Score=54.05  Aligned_cols=147  Identities=18%  Similarity=0.148  Sum_probs=92.6

Q ss_pred             eEEEeCCHHH----HHHHHHhcCCCCCCC---EE--EEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhh
Q 021539          147 LVLFVPNYKE----AMLMIGESYPFFKGN---YY--LTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFR  217 (311)
Q Consensus       147 ~VvFTsnaTe----alnlv~~s~~~~~Gd---~I--ls~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~  217 (311)
                      .+.|-+|.-.    +=-.++++|-..+|+   +|  +-...|-.|...  |.--|.+|+.|..+. +|.||..+|++...
T Consensus       599 ~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPAS--A~MagmkvvpV~~~~-~G~id~~dLk~kae  675 (1001)
T KOG2040|consen  599 SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPAS--AAMAGMKVVPVGCDA-NGNIDMVDLKAKAE  675 (1001)
T ss_pred             ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhh--HHhcCCEEEEeeccC-CCCccHHHHHHHHH
Confidence            4888876533    122455666544553   33  222334433321  122389999998886 79999999988876


Q ss_pred             ccCCCCCceEEEEecc--c-ccchhc-HHHHHH-HHHCCcEEEecccccCccCccc-CCCCCCCcEEEEccccCcC----
Q 021539          218 RKCKYTPKGLFSYPVV--V-NGTRYS-MHWISE-AHRNAWHVLLDATGLVFGEDQL-ALALHRPDLVLCTLDNNTH----  287 (311)
Q Consensus       218 ~~~~~~~t~LVs~~~~--~-tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv~G~~pl-dl~~l~~Dfl~~S~HK~l~----  287 (311)
                      +..    ..|-+++..  + .|+.-+ |++|.. +|++|--|.+|++-.= .++-+ .-.+.+.|+--.+.|| .|    
T Consensus       676 kh~----~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMN-AqVGlc~pGd~GaDV~HLNLHK-TFcIPH  749 (1001)
T KOG2040|consen  676 KHK----DNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMN-AQVGLCRPGDIGADVCHLNLHK-TFCIPH  749 (1001)
T ss_pred             Hhh----hhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcc-ceecccCCccccccceeecccc-eeeecC
Confidence            542    345555433  3 576543 777755 6999999999998764 22221 2344689999999999 54    


Q ss_pred             --CCCCceEEEEEeCCCC
Q 021539          288 --AQPLKITCLLVRRKSF  303 (311)
Q Consensus       288 --G~P~GiG~L~vr~~~~  303 (311)
                        |+| |+|=+-|++.+.
T Consensus       750 GGGGP-g~gPIgVK~HLa  766 (1001)
T KOG2040|consen  750 GGGGP-GMGPIGVKKHLA  766 (1001)
T ss_pred             CCCCC-CCCccchhhhcc
Confidence              334 777777776554

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=94.85  E-value=0.81  Score=46.26  Aligned_cols=90  Identities=16%  Similarity=0.249  Sum_probs=55.4

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~D  276 (311)
                      .+.+++.++...  ....-|.+ +. + ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..--    +.-...||
T Consensus       208 ~~~l~~~l~~~~--~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PD  285 (453)
T PRK06943        208 LADVRRLFAERA--GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPD  285 (453)
T ss_pred             HHHHHHHHHhCC--CceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCC
Confidence            356677776321  12333433 42 4 4677655    334544 6899999999999973254321    11234699


Q ss_pred             EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++++  |++-|+  |  +|+++.++++.+
T Consensus       286 ivt~g--Kgl~gG~~P--i~av~~~~ei~~  311 (453)
T PRK06943        286 FLCLS--KGISGGYLP--LSLVLSRDAIFA  311 (453)
T ss_pred             eEeee--hhhccCccc--ceEEEEcHHHHH
Confidence            99994  756654  5  888999877654

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=94.84  E-value=1.1  Score=44.42  Aligned_cols=172  Identities=11%  Similarity=0.060  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCCCCCCCEEEEcc-CcC--hHHHHHHH-----HhCCc-----E
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYPFFKGNYYLTII-SEE--SDYIKGFA-----AQKES-----K  194 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~~~~Gd~Ils~~-eh~--~~~~~~la-----~~~G~-----~  194 (311)
                      .+.-+++++++... ....|.|+.++|||+..++. +..+.....|++.. .+|  ......+.     .+.++     .
T Consensus        79 ~~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~  157 (420)
T TIGR00700        79 VALAEKLNRIAPGS-GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPE  157 (420)
T ss_pred             HHHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCC
Confidence            34445566665321 12359999999998876544 11122234565433 345  11111111     11121     2


Q ss_pred             EEEEeCCCCCc------cc----CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          195 VIAAPETWLDL------RI----KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       195 V~~vp~~~~~g------~i----d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                      +..+|......      ..    +.+.+++.+...........|.+ +.+ .+|.+.|    +++|.+ |+++|+++++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~D  237 (420)
T TIGR00700       158 VYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIAD  237 (420)
T ss_pred             cEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence            33333311000      01    13456666531111112344444 333 5888888    667755 69999999999


Q ss_pred             ccccCccCcc--c--CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          258 ATGLVFGEDQ--L--ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv~G~~p--l--dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      =+|.-.|...  .  +-....+|++++  =|.+.|+ --+|+++.++++.+
T Consensus       238 EV~tg~gr~g~~~a~~~~~~~pDi~~l--sK~l~~G-~pig~v~~~~~i~~  285 (420)
T TIGR00700       238 EVQTGFARTGAMFACEHEGPEPDLITT--AKSLADG-LPLSGVTGRAEIMD  285 (420)
T ss_pred             ecccCCcccchhHHHhhcCCCCCEEEe--eccccCC-cceEEEEecHHHHh
Confidence            9987324322  1  112246897764  5844432 22899999877654

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=94.83  E-value=0.57  Score=47.77  Aligned_cols=89  Identities=17%  Similarity=0.126  Sum_probs=55.4

Q ss_pred             CHHHHHhhhhccCCCCCceEEEEe-cc-cccchhcHH----HHHH-HHHCCcEEEecccccCccCcccC------CCCCC
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYSMH----WISE-AHRNAWHVLLDATGLVFGEDQLA------LALHR  274 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~Pi~----~I~~-a~~~g~~vlvDAaQsv~G~~pld------l~~l~  274 (311)
                      |.+.+++.+....  .....|.+- .. ..|.+.|..    .+.+ |+++|+++++|=+|.  |- ...      .-...
T Consensus       232 d~~~l~~~l~~~~--~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t--Gf-R~g~~ga~~~~gv~  306 (474)
T PLN02482        232 DLEAVKKLFEANK--GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT--GF-RIAYGGAQEYFGIT  306 (474)
T ss_pred             ChHHHHHHHHhCC--CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--Ce-ecCcchHhHHhCCC
Confidence            4677888886421  123444443 33 468887743    4644 689999999999994  42 221      11236


Q ss_pred             CcEEEEccccCcCC-CCCceEEEEEeCCCCcc
Q 021539          275 PDLVLCTLDNNTHA-QPLKITCLLVRRKSFDT  305 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G-~P~GiG~L~vr~~~~~~  305 (311)
                      ||++++  =|++-| +|  +|++..+++..+.
T Consensus       307 PDi~t~--gK~lggG~P--igav~g~~ei~~~  334 (474)
T PLN02482        307 PDLTTL--GKVIGGGLP--VGAYGGRREIMEM  334 (474)
T ss_pred             CCEEEe--cchhhCCCc--eEEEEEcHHHHHh
Confidence            899776  584443 24  7889888776543

>PRK07483 hypothetical protein; Provisional

Probab=94.61  E-value=0.53  Score=47.38  Aligned_cols=90  Identities=22%  Similarity=0.242  Sum_probs=53.5

Q ss_pred             HHHHhhhhccCCCCCceEEEE-ecc-c-ccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY-PVV-V-NGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~-~~~-~-tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~Df  277 (311)
                      +.+++.+... .......|.+ +.+ . -|.+.|    ++.+.+ |+++|+++++|=+|.-.|..--    +.-...||+
T Consensus       186 ~~l~~~~~~~-~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDi  264 (443)
T PRK07483        186 DELEAKILEL-GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDL  264 (443)
T ss_pred             HHHHHHHHhc-CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCe
Confidence            4566655421 1112334433 333 2 366666    556655 6899999999999982143221    111346999


Q ss_pred             EEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      ++++  |++-|+  |  +|++++++++.+
T Consensus       265 v~~g--K~l~gG~~P--i~av~~~~~i~~  289 (443)
T PRK07483        265 VTIA--KGLGAGYQP--IGAVLASDRIYD  289 (443)
T ss_pred             eeeh--hhhccCccc--cEEEEEcHHHHH
Confidence            9984  756553  4  899999877644

>PRK07481 hypothetical protein; Provisional

Probab=94.55  E-value=0.63  Score=46.89  Aligned_cols=76  Identities=18%  Similarity=0.231  Sum_probs=49.2

Q ss_pred             ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CC
Q 021539          225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PL  291 (311)
Q Consensus       225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~  291 (311)
                      ...|.+ +.+ ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..-    ...-...||+++++  |++-|+  | 
T Consensus       214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~P-  290 (449)
T PRK07481        214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVP-  290 (449)
T ss_pred             EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcC-
Confidence            344444 333 4677766    566655 689999999999988225421    12223469999984  855543  5 


Q ss_pred             ceEEEEEeCCCCc
Q 021539          292 KITCLLVRRKSFD  304 (311)
Q Consensus       292 GiG~L~vr~~~~~  304 (311)
                       +|+++++++..+
T Consensus       291 -i~av~~~~~i~~  302 (449)
T PRK07481        291 -LGATMVNARIAD  302 (449)
T ss_pred             -ceEEEEcHHHHH
Confidence             788999876543

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=94.51  E-value=0.58  Score=47.50  Aligned_cols=90  Identities=18%  Similarity=0.316  Sum_probs=55.4

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-e-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCccc----CCCCCCCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQL----ALALHRPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~D  276 (311)
                      ++.+++.+....  .....|.+ + .+ ..|.+.|    ++++.+ |+++|+++++|=+|.-.|..--    +.-...||
T Consensus       201 l~~le~~~~~~~--~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PD  278 (466)
T PRK07030        201 FAHMEQTLAEHH--DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPD  278 (466)
T ss_pred             HHHHHHHHHhCC--CceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCC
Confidence            345667775321  12344444 4 24 4677665    345654 6899999999999872253211    22234699


Q ss_pred             EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++++  |++-|+  |  +|++++++++.+
T Consensus       279 iv~~g--Kgl~gG~~P--i~av~~~~ei~~  304 (466)
T PRK07030        279 FLCLS--KALTGGYLP--LAAVLTTDTVYQ  304 (466)
T ss_pred             EEeee--hhccCCccc--ceEEEecHHHHH
Confidence            99994  756654  5  788998877643

>PRK07036 hypothetical protein; Provisional

Probab=94.47  E-value=0.78  Score=46.56  Aligned_cols=76  Identities=17%  Similarity=0.274  Sum_probs=50.6

Q ss_pred             ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--cCCC---CCCCcEEEEccccCcCCC--C
Q 021539          225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--LALA---LHRPDLVLCTLDNNTHAQ--P  290 (311)
Q Consensus       225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~---~l~~Dfl~~S~HK~l~G~--P  290 (311)
                      ...|.+ +.+ ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..-  +-.+   ...||+++++  |++-|+  |
T Consensus       221 iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~P  298 (466)
T PRK07036        221 IAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQP  298 (466)
T ss_pred             eEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccc
Confidence            344444 333 4788888    778865 699999999999995215432  1111   3469999884  855542  4


Q ss_pred             CceEEEEEeCCCCc
Q 021539          291 LKITCLLVRRKSFD  304 (311)
Q Consensus       291 ~GiG~L~vr~~~~~  304 (311)
                        +|+++.++++.+
T Consensus       299 --i~av~~~~~i~~  310 (466)
T PRK07036        299 --LGAVIISERLLD  310 (466)
T ss_pred             --cEEEEEcHHHHH
Confidence              799999877654

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=94.39  E-value=0.52  Score=47.57  Aligned_cols=110  Identities=14%  Similarity=0.145  Sum_probs=73.4

Q ss_pred             eEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCC-----
Q 021539          147 LVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCK-----  221 (311)
Q Consensus       147 ~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~-----  221 (311)
                      +|+.|.|.|.|+..+.+.+ ...|++|+..-.-...++.. .+..|++++.|+.+. +| ++++.|++.+.....     
T Consensus       126 diiit~G~t~~l~~~l~~~-~N~gd~vlie~~ty~~AL~s-~~a~gv~~ipv~md~-~G-i~pE~l~~il~~w~~~~~k~  201 (472)
T KOG0634|consen  126 DIIITNGNTDGLFKVLRTL-INRGDHVLIEEYTYPSALQS-MEALGVKIIPVKMDQ-DG-IDPESLEEILSNWKPGSYKK  201 (472)
T ss_pred             eEEEecCCchHHHHHHHHh-hcCCCceEEecccchHHHHh-ccccCceEEeccccC-CC-CCHHHHHHHHhcCCcccccC
Confidence            6999999999999998876 36788886322111333322 244587777777765 44 788999888864211     


Q ss_pred             CCCceEEEEe-cc-cccchhcHHH---H-HHHHHCCcEEEecccc
Q 021539          222 YTPKGLFSYP-VV-VNGTRYSMHW---I-SEAHRNAWHVLLDATG  260 (311)
Q Consensus       222 ~~~t~LVs~~-~~-~tG~i~Pi~~---I-~~a~~~g~~vlvDAaQ  260 (311)
                      .++.-|-+++ .+ =||.-++++.   | ..|++++.+++.|=.=
T Consensus       202 ~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpY  246 (472)
T KOG0634|consen  202 PKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPY  246 (472)
T ss_pred             CCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcc
Confidence            1223455664 23 5999999974   4 4579999999988643

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=94.38  E-value=0.17  Score=49.04  Aligned_cols=137  Identities=15%  Similarity=0.134  Sum_probs=82.9

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH--HHHHHhCCcEEEEEeCCCCCccc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI--KGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~--~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      +...+||+|-+-.  + .|+ -++.-.|+..+.+.+ ..+.+-|+|.--.|.+.+  -.|+++++             -+
T Consensus       116 ~LE~kiAqfh~rE--D-~il-ypscfdANag~feai-l~pedAvfSDeLNhASIIdGirLckry~-------------h~  177 (417)
T KOG1359|consen  116 LLESKIAQFHGRE--D-TIL-YPSCFDANAGAFEAI-LTPEDAVFSDELNHASIIDGIRLCKRYR-------------HV  177 (417)
T ss_pred             HHHHHHHHHhCCC--c-eEE-eccccccchHHHHHh-cChhhhhhccccccchhhhhhHHHhhhc-------------cc
Confidence            4556789888762  2 244 444455555555554 345566665422232222  23555432             23


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCCCC
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALHRP  275 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l~~  275 (311)
                      |.-.++..+...++. +.+||+...+  .-|-+-|+++|.. ++++|+++++|-+|+- |-.-         +++. -++
T Consensus       178 dv~~l~~~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaT-gf~G~tGrGt~E~~~vm-~~v  254 (417)
T KOG1359|consen  178 DVFDLEHCLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHAT-GFFGETGRGTAEEFGVM-GDV  254 (417)
T ss_pred             hhHHHHHHHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccc-eeecCCCCChHHHhCCC-Ccc
Confidence            344455444443432 2578887766  3799999999976 6899999999999985 4221         2222 369


Q ss_pred             cEEEEccccCcCC
Q 021539          276 DLVLCTLDNNTHA  288 (311)
Q Consensus       276 Dfl~~S~HK~l~G  288 (311)
                      |.+..+.-| -.|
T Consensus       255 diinsTLgK-AlG  266 (417)
T KOG1359|consen  255 DIINSTLGK-ALG  266 (417)
T ss_pred             eehhhhhhh-hhc
Confidence            999999999 554

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=94.23  E-value=1  Score=45.67  Aligned_cols=173  Identities=12%  Similarity=0.086  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--HHHHHHH-----HhCCc----
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--DYIKGFA-----AQKES----  193 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~~~~~la-----~~~G~----  193 (311)
                      ...+.-+++++.+...  ...|.|+.++|||+..++.- ..+.....|++.. .+|.  .....+.     .+.++    
T Consensus        97 ~~~~lae~L~~~~p~~--~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~  174 (457)
T PRK05639         97 RAIRVAEKLAEISPIE--NPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM  174 (457)
T ss_pred             HHHHHHHHHHhhCCCC--cCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence            3345556666665432  13599999999988765442 1122334566433 3552  1111111     11111    


Q ss_pred             -EEEEEeCCCCCc-c------cCH--------HHHHhhhhcc-CCCCCceEEEE-ecc-cccchhc----HHHHHH-HHH
Q 021539          194 -KVIAAPETWLDL-R------IKG--------SQLSQNFRRK-CKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHR  249 (311)
Q Consensus       194 -~V~~vp~~~~~g-~------id~--------~~L~~~l~~~-~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~  249 (311)
                       .+..+|...... .      -+.        +.+++.+... .......-|.+ +.+ ..|.+.|    +++|.+ |++
T Consensus       175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~  254 (457)
T PRK05639        175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE  254 (457)
T ss_pred             CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence             245555432110 0      011        2344444211 00112333333 333 4677766    345544 689


Q ss_pred             CCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          250 NAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       250 ~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|+++++|=+|.-.|..-    .+.-...||++++  =|++-|+ -++|+++.+++..+
T Consensus       255 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG-~pi~av~~~~~i~~  310 (457)
T PRK05639        255 HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIF--GKGVASG-MGLSGVIGRKELMD  310 (457)
T ss_pred             cCCEEEEechhhccCcCchHHHHHhcCCCCCEEEe--chhhcCC-CcceeEEehHHHHh
Confidence            999999999987214221    1112347999996  5866643 34899999887655

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=94.20  E-value=0.31  Score=47.38  Aligned_cols=201  Identities=11%  Similarity=0.147  Sum_probs=105.5

Q ss_pred             CCCCCCCCCccccccccchhHHHHhcCC------CCcchhhhhHHHHHH-HHHHHHHcCCCCCCCeEEEeCCHHHHHHHH
Q 021539           89 SSSPSFNFNDLDKSQLEPSRLLDILSKK------TSFKGNFISIPEIQA-RNRALKHCGLSEDEYLVLFVPNYKEAMLMI  161 (311)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~------ss~~G~~~~~~le~a-R~~IA~~Lga~~dey~VvFTsnaTealnlv  161 (311)
                      |||.-  +|++|  |..+.-+.+|++..      ..|.|.+-...+.++ -.-+-+-+|-+-.+.+|..|+|...++--+
T Consensus        38 GNPa~--iPem~--~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYl  113 (417)
T COG3977          38 GNPAR--IPEMD--DYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYL  113 (417)
T ss_pred             CCccc--ChhHH--HHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHH
Confidence            45544  67754  44444455555433      244555544444333 222233444444455799999988776544


Q ss_pred             HhcCC--CCCCC--EEEEccCcC----hHH-H-HH-HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE
Q 021539          162 GESYP--FFKGN--YYLTIISEE----SDY-I-KG-FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY  230 (311)
Q Consensus       162 ~~s~~--~~~Gd--~Ils~~eh~----~~~-~-~~-la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~  230 (311)
                      ..-|.  ...|+  .|+.++.-+    .++ + .. +.. ..-+++.+|...=.-++|.++|.  +.+     +++.+|+
T Consensus       114 fNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs-~kP~iel~~~g~FKY~vDF~~l~--i~e-----~~g~ic~  185 (417)
T COG3977         114 FNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVS-AKPNIELLPAGQFKYHVDFEHLH--IGE-----STGAICV  185 (417)
T ss_pred             HHHhcCccCCCcceeEeeccChhhccccccccCccceee-ccCCcccccccceeeccCHHHcc--ccc-----ccceEEe
Confidence            44332  12343  344332210    000 0 00 000 01122222221111245666554  222     2678888


Q ss_pred             ecc--cccchhcHHHHH----HHHHCCcEEEecccccCccCcccCCCCC----CC-cEEEEccccCcCCCCC-ceEEEEE
Q 021539          231 PVV--VNGTRYSMHWIS----EAHRNAWHVLLDATGLVFGEDQLALALH----RP-DLVLCTLDNNTHAQPL-KITCLLV  298 (311)
Q Consensus       231 ~~~--~tG~i~Pi~~I~----~a~~~g~~vlvDAaQsv~G~~pldl~~l----~~-Dfl~~S~HK~l~G~P~-GiG~L~v  298 (311)
                      +--  -||-+.-=+|+.    .++++|+++++|-+=.+ +--.+.+++.    +. =.+|+|.-|  .|.|- .+|+.+.
T Consensus       186 SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~~~w~~NiilC~SLSK--~GLPG~R~GIiIa  262 (417)
T COG3977         186 SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDATPLWNENIILCMSLSK--LGLPGSRCGIIIA  262 (417)
T ss_pred             cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceecccccccCCCCEEEEeehhh--cCCCCcceeEEEc
Confidence            633  589887666652    35899999999999887 5555555542    22 367889999  56562 3888888


Q ss_pred             eCCCCc
Q 021539          299 RRKSFD  304 (311)
Q Consensus       299 r~~~~~  304 (311)
                      +++++.
T Consensus       263 ne~viq  268 (417)
T COG3977         263 NEKVIQ  268 (417)
T ss_pred             cHHHHH
Confidence            876643

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=94.00  E-value=0.63  Score=47.02  Aligned_cols=183  Identities=16%  Similarity=0.086  Sum_probs=106.2

Q ss_pred             chhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH---HhcCCCCCCCEEEE-ccCcC-
Q 021539          106 PSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMI---GESYPFFKGNYYLT-IISEE-  180 (311)
Q Consensus       106 ~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv---~~s~~~~~Gd~Ils-~~eh~-  180 (311)
                      ...+.+.+.+-.+|. ......++-| +.|.+.+..- +  .|=|++++|||.+.+   +++|.  ..+.|+- .-.+| 
T Consensus        75 ~~Av~~~l~~G~~fg-~Pte~Ei~~A-ell~~~~p~~-e--~vrfvnSGTEAtmsAiRlARa~T--gR~kIikF~G~YHG  147 (432)
T COG0001          75 VEAVQEQLERGLSFG-APTELEVELA-ELLIERVPSI-E--KVRFVNSGTEATMSAIRLARAYT--GRDKIIKFEGCYHG  147 (432)
T ss_pred             HHHHHHHHHhcCCCC-CCCHHHHHHH-HHHHHhcCcc-c--EEEEecchhHHHHHHHHHHHHhh--CCCeEEEEcCCCCC
Confidence            445777777777764 4444444555 6666666652 2  399999999998865   44553  3456652 22223 


Q ss_pred             -hHHHHHHHH----------hCCc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcH
Q 021539          181 -SDYIKGFAA----------QKES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSM  241 (311)
Q Consensus       181 -~~~~~~la~----------~~G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi  241 (311)
                       .+.+.--+.          ..|+      .+..+|.|      |.+.++++++....  ...-|.+ +.+ -.|.+.|-
T Consensus       148 ~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~g~--~IAaVIvEPv~gn~g~i~p~  219 (432)
T COG0001         148 HSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN------DLEALEEAFEEYGD--DIAAVIVEPVAGNMGVVPPE  219 (432)
T ss_pred             CccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC------CHHHHHHHHHHcCC--cEEEEEeccccCCCCCCCCC
Confidence             233211010          0011      23445554      56788888886421  1233333 333 37888885


Q ss_pred             H----HHHH-HHHCCcEEEecccccCccCcccCC------CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          242 H----WISE-AHRNAWHVLLDATGLVFGEDQLAL------ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       242 ~----~I~~-a~~~g~~vlvDAaQsv~G~~pldl------~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      +    .+.+ ++++|++++.|=+..-   -++.+      -...||+.++  =| +.|+=-=+|++--|++..+...|.
T Consensus       220 ~~Fl~~Lr~lt~e~G~lLI~DEViTG---FR~~~gGaq~~~gi~PDlttl--GK-iIGGGlP~ga~gGr~eiM~~~~p~  292 (432)
T COG0001         220 PGFLEGLRELTEEHGALLIFDEVITG---FRVALGGAQGYYGVEPDLTTL--GK-IIGGGLPIGAFGGRAEIMEQLAPL  292 (432)
T ss_pred             HHHHHHHHHHHHHcCcEEEEecchhh---cccCCcccccccCcCcchhhh--hh-hhcCCcceeeeccHHHHHhhhCCC
Confidence            4    4444 5899999999987663   23332      1246898775  48 665412288888888887765554

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=93.77  E-value=0.8  Score=45.99  Aligned_cols=171  Identities=13%  Similarity=0.107  Sum_probs=85.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCCCEEEEcc-CcChHHH--HHHHH-----h
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKGNYYLTII-SEESDYI--KGFAA-----Q  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~Gd~Ils~~-eh~~~~~--~~la~-----~  190 (311)
                      .....+.-+++++++...  -..|.|+.++|||+..++.   .+.   -....+|++.. .+|....  ..+..     +
T Consensus        85 ~~~~~~la~~L~~~~p~~--~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~  162 (428)
T PRK07986         85 HPPAIELCRKLVAMTPQP--LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMH  162 (428)
T ss_pred             CHHHHHHHHHHHhhCCCC--cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhh
Confidence            333445555666665432  2359999999998776544   220   01224565433 3441111  11100     0


Q ss_pred             --CC---cEEEEEeCCCCC-----cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCc
Q 021539          191 --KE---SKVIAAPETWLD-----LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAW  252 (311)
Q Consensus       191 --~G---~~V~~vp~~~~~-----g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~  252 (311)
                        .+   ..+..+|.....     ..-+.+++++.++...  .....|.+ +. + ..|.+.|    +++|.+ |+++|+
T Consensus       163 ~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~--~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~  240 (428)
T PRK07986        163 SLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHR--HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGI  240 (428)
T ss_pred             hccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCC--CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC
Confidence              00   112233321100     0113456777776321  12445544 32 3 3455432    566655 689999


Q ss_pred             EEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCC
Q 021539          253 HVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSF  303 (311)
Q Consensus       253 ~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~  303 (311)
                      ++++|=+|.-.|..-    .+.....||++++  =|.+.|+  |  +|+++.++++.
T Consensus       241 lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~gG~~p--~~av~~~~~i~  293 (428)
T PRK07986        241 LLIADEIATGFGRTGKLFACEHAGIAPDILCL--GKALTGGTMT--LSATLTTREVA  293 (428)
T ss_pred             EEEEeccccCCccCCCeeeecccCCCCCEEEe--chhhhCCccc--CcchhchHHHH
Confidence            999999995213221    1222346899975  5855543  4  46666666554

>PRK06917 hypothetical protein; Provisional

Probab=93.29  E-value=2.4  Score=42.80  Aligned_cols=175  Identities=14%  Similarity=0.096  Sum_probs=86.7

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-----CCC-CEEEEcc-CcC--hHHHHHHHHhC-
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-----FKG-NYYLTII-SEE--SDYIKGFAAQK-  191 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-----~~G-d~Ils~~-eh~--~~~~~~la~~~-  191 (311)
                      .......+.-+++++++...  ...|.|+.++|||+..+++-- .+     ..| ..|++.. .+|  ......+.... 
T Consensus        71 ~~~~~~~~lae~L~~~~p~~--~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~  148 (447)
T PRK06917         71 FTSEPAEKLAKKLSDLSPGD--LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPL  148 (447)
T ss_pred             cCCHHHHHHHHHHHHhCCCC--CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcc
Confidence            33444556777777776432  235999999999877654421 00     122 4565433 344  11111111000 


Q ss_pred             -----C---cEEEEEeCCCC-C---cc-------cCHHHHHhhhhccCCCCCceEEEE-ecc-cc-cchhc-H---HHHH
Q 021539          192 -----E---SKVIAAPETWL-D---LR-------IKGSQLSQNFRRKCKYTPKGLFSY-PVV-VN-GTRYS-M---HWIS  245 (311)
Q Consensus       192 -----G---~~V~~vp~~~~-~---g~-------id~~~L~~~l~~~~~~~~t~LVs~-~~~-~t-G~i~P-i---~~I~  245 (311)
                           +   ..+..+|.... .   +.       -+.+.+++.++.... ....-|.+ +.+ .. |.+.| -   +.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~-~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr  227 (447)
T PRK06917        149 RRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA-EHIAAFIAEPIIGAAGAAVVPPKGYYKVIK  227 (447)
T ss_pred             ccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC-CceEEEEEeccccCcCceecCCHHHHHHHH
Confidence                 0   01122221100 0   00       013456666653211 12333333 333 23 46655 3   3444


Q ss_pred             H-HHHCCcEEEecccccCccCccc----CCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          246 E-AHRNAWHVLLDATGLVFGEDQL----ALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       246 ~-a~~~g~~vlvDAaQsv~G~~pl----dl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      + |+++|+++++|=+|.-.|..--    ..-...||++++  =|++-|+  |  +|++..+++..+
T Consensus       228 ~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~--gK~l~~G~~P--i~a~~~~~~i~~  289 (447)
T PRK06917        228 EICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTL--GKGLGAGYTP--IAATVVSDRVME  289 (447)
T ss_pred             HHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEe--eehhccCCcc--eEEEEEcHHHHH
Confidence            4 6899999999999872143221    111246999877  4855543  5  788888876543

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=93.24  E-value=1.1  Score=44.94  Aligned_cols=68  Identities=15%  Similarity=0.205  Sum_probs=41.9

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSF  303 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~  303 (311)
                      ..|.+.|    ++++.+ |+++|+++++|=+|.-.|..-    .......||++++  =|++-|+ +. +|+++.+++..
T Consensus       213 ~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~p-~~av~~~~~i~  289 (422)
T PRK05630        213 AGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFMS-FAATLCTDKVA  289 (422)
T ss_pred             cCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--echhhcCccc-cceeeccHHHH
Confidence            4566654    344544 689999999999995214321    1222356999976  5855342 32 57777777654


Q ss_pred             c
Q 021539          304 D  304 (311)
Q Consensus       304 ~  304 (311)
                      +
T Consensus       290 ~  290 (422)
T PRK05630        290 Q  290 (422)
T ss_pred             H
Confidence            4

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=93.09  E-value=2.5  Score=42.34  Aligned_cols=72  Identities=14%  Similarity=0.131  Sum_probs=44.3

Q ss_pred             HHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDL  277 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Df  277 (311)
                      +++++.+....  .....|.+. .+ ..|.+.|    ++.|.+ |+++|+++++|-+|+ + |..-    .+.....||+
T Consensus       206 ~~~~~~~~~~~--~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GrtG~~~a~~~~gv~PDi  282 (431)
T TIGR03251       206 RQARAAFAERP--HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGV-GLTGTAWAYQQLGVQPDI  282 (431)
T ss_pred             HHHHHHHHhCC--CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcc-CccchHHHHHhcCCCCCE
Confidence            34555664321  124455543 33 4677652    556655 689999999999999 5 7652    2223357999


Q ss_pred             EEEcccc
Q 021539          278 VLCTLDN  284 (311)
Q Consensus       278 l~~S~HK  284 (311)
                      ++++-..
T Consensus       283 ~~~gK~~  289 (431)
T TIGR03251       283 VAFGKKT  289 (431)
T ss_pred             EEecccC
Confidence            9986443

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=93.06  E-value=3.1  Score=41.81  Aligned_cols=68  Identities=16%  Similarity=0.247  Sum_probs=41.9

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--cCCCCC--CCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--LALALH--RPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~l--~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ..|.+.|    +++|.+ |+++|++++.|=+|.-.|...  +.+..+  .+|.++  .=|.+.++ --+|+++.++++.+
T Consensus       231 ~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t--~sK~l~~G-~pig~v~~~~~i~~  307 (451)
T PRK06918        231 EGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLIT--VSKSLGAG-VPISGVIGRKEIMD  307 (451)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEe--eehhhcCC-CccEEEEEcHHHHh
Confidence            4577666    344544 689999999999987324322  222333  389665  56844432 22799998876544

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=92.78  E-value=2.8  Score=41.74  Aligned_cols=89  Identities=13%  Similarity=0.144  Sum_probs=51.4

Q ss_pred             CHHHHHhhhhccCCCCCceEEEE-ecccc-cchhc----HHHHHH-HHHCCcEEEecccccCccCcccCC----CCCCCc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSY-PVVVN-GTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLAL----ALHRPD  276 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~-~~~~t-G~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl----~~l~~D  276 (311)
                      +.+.+++.++++    +...|.+ +.+-+ |.+.|    +.++.+ |+++|+++++|=+|.-.|...--+    ....+|
T Consensus       175 d~~~l~~~~~~~----~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pd  250 (408)
T PRK04612        175 DVEALEAAMAGG----DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD  250 (408)
T ss_pred             CHHHHHHhhCCC----CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCC
Confidence            467788887532    2444444 44434 44443    455654 689999999999997325432111    123567


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++++  =|++.|+ --+|+++.+++..
T Consensus       251 i~t~--~K~l~~G-~piga~~~~~~~~  274 (408)
T PRK04612        251 IVTL--AKALGGG-FPIGAMLAGPKVA  274 (408)
T ss_pred             EEEE--cchhcCC-CceEEEEECHHHH
Confidence            7766  5834322 1288888886543

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=92.70  E-value=1.4  Score=44.88  Aligned_cols=90  Identities=18%  Similarity=0.277  Sum_probs=54.6

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-e-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-P-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D  276 (311)
                      .+.+++.+....  ....-|.+ + .+ ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..-    .+.....||
T Consensus       223 ~~~l~~~~~~~~--~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PD  300 (472)
T PRK08742        223 ADALQALFEQSP--GEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPD  300 (472)
T ss_pred             HHHHHHHHHhCC--CceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCC
Confidence            455667775321  12344444 3 23 4677655    334544 689999999999998225432    122235699


Q ss_pred             EEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          277 LVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       277 fl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++++  |++-|+  |  +|++++++++.+
T Consensus       301 iv~~g--Kgl~gG~~P--laav~~~~ei~~  326 (472)
T PRK08742        301 LLCLS--KGLTGGFLP--LSAVLATQQLYD  326 (472)
T ss_pred             EEEEc--ccccCCCCC--cceeeccHHHHH
Confidence            99994  856543  5  788988877643

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=92.62  E-value=1.1  Score=45.02  Aligned_cols=169  Identities=14%  Similarity=0.087  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCC---CCCC-CEEEEcc-CcChHHHHHHH-------H
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYP---FFKG-NYYLTII-SEESDYIKGFA-------A  189 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~---~~~G-d~Ils~~-eh~~~~~~~la-------~  189 (311)
                      .....+.-+++++.+...  -..|.|+.++|||+..++.   .+.   -++| ..|++.. .+|...+-.+.       .
T Consensus        86 ~~~~~~lae~L~~~~p~~--~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~  163 (429)
T PRK06173         86 HEPAVELAQKLLEILPPS--LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGM  163 (429)
T ss_pred             CHHHHHHHHHHHhhCCCC--cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhh
Confidence            344445666666665322  2359999999998765433   220   0122 3465433 34421111110       0


Q ss_pred             hCCc-----EEEEEeCCCCC-----cccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchh-cHH---HHHH-HHHCC
Q 021539          190 QKES-----KVIAAPETWLD-----LRIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRY-SMH---WISE-AHRNA  251 (311)
Q Consensus       190 ~~G~-----~V~~vp~~~~~-----g~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~-Pi~---~I~~-a~~~g  251 (311)
                      +.++     .+..+|.....     ..-+++.|++.+....  ....-|.+ +. + +.|.+. |-+   ++.+ |+++|
T Consensus       164 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~--~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g  241 (429)
T PRK06173        164 HGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKG--DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYG  241 (429)
T ss_pred             hhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCC--CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcC
Confidence            0011     12334431100     0113455677775321  12333333 43 4 456664 434   3444 58899


Q ss_pred             cEEEecccccCccCcc------cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCCC
Q 021539          252 WHVLLDATGLVFGEDQ------LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKS  302 (311)
Q Consensus       252 ~~vlvDAaQsv~G~~p------ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~  302 (311)
                      +++++|=+|.  |-.+      .+.....||++++  =|++.|+ .. +++++++++.
T Consensus       242 ~llI~DEv~t--G~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~~p-~~a~~~~~~i  294 (429)
T PRK06173        242 VLLIFDEIAT--GFGRTGKLFALEHAGVVPDIMCI--GKALTGGYLT-LSATITTEAI  294 (429)
T ss_pred             CeEEecchhc--CCCcCCcchHHHhcCCCCCEEEe--ehhhhCCccc-cceEEecHHH
Confidence            9999999994  4322      1222346999985  5866554 22 5777777654

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=92.44  E-value=1.1  Score=45.27  Aligned_cols=171  Identities=13%  Similarity=0.147  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCC---CCC-CEEEEcc-CcChHHH--HHHHH----hC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPF---FKG-NYYLTII-SEESDYI--KGFAA----QK  191 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~---~~G-d~Ils~~-eh~~~~~--~~la~----~~  191 (311)
                      ....+.-+++++++...  ...|.|+.++|||+..++.   .+.-   .+| ..|++.. .+|....  ..+..    +.
T Consensus        99 ~~~~~lae~L~~~~p~~--~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~  176 (460)
T PRK06916         99 VPSILLAEKLIEVVPEG--LKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQ  176 (460)
T ss_pred             HHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccc
Confidence            33445666677776432  1359999999998776544   2100   122 4565433 3442111  11110    00


Q ss_pred             C-----cEEEEEeCCC----C-Cc------ccCHHHHHhhhhccCCCCCceEEEE-ec-c-cccchh-cHH---HHHH-H
Q 021539          192 E-----SKVIAAPETW----L-DL------RIKGSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTRY-SMH---WISE-A  247 (311)
Q Consensus       192 G-----~~V~~vp~~~----~-~g------~id~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i~-Pi~---~I~~-a  247 (311)
                      .     ..+..+|...    + .+      .-+.+.+++.++...  .....|.+ +. + ..|.+. |-+   .+.+ |
T Consensus       177 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc  254 (460)
T PRK06916        177 VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH--EEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLC  254 (460)
T ss_pred             ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC--CcEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence            0     1223343210    0 00      012445667775321  12344444 42 3 457665 433   4444 6


Q ss_pred             HHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          248 HRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       248 ~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +++|+++++|=+|.-.|..-    .+.-...||++++  =|++-|+  |  +|+++.++++.+
T Consensus       255 ~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~P--i~av~~~~ei~~  313 (460)
T PRK06916        255 TKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTA--GKGLTGGYLP--IAITVTTDEIYN  313 (460)
T ss_pred             HHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeee--ehhhhcCccc--cceeeecHHHHH
Confidence            89999999999986214322    1112346999987  4756654  4  888999876543

>PRK06149 hypothetical protein; Provisional

Probab=92.40  E-value=2.8  Score=46.43  Aligned_cols=67  Identities=10%  Similarity=0.061  Sum_probs=47.1

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEecccc-cCccCcccCC-----CCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATG-LVFGEDQLAL-----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ-sv~G~~pldl-----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ..|.+.|    +++|.+ |+++|+++++|=+| .+ |..---+     ....||++++  =|++-|+ --+|+++.++++
T Consensus       756 ~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf-GRtG~~~~a~e~~gv~PDivt~--gK~lg~G-~Pl~av~~~~~i  831 (972)
T PRK06149        756 NAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY-GRLGHYFWGFEQQGVVPDIITM--AKGMGNG-HPLGAVITRREI  831 (972)
T ss_pred             CCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC-CccCccchhhhhcCCCCCEEEe--cccccCC-eeeEEEEEcHHH
Confidence            4688888    888865 69999999999999 34 5432101     2246999976  5856543 128999999876


Q ss_pred             Cc
Q 021539          303 FD  304 (311)
Q Consensus       303 ~~  304 (311)
                      .+
T Consensus       832 ~~  833 (972)
T PRK06149        832 AE  833 (972)
T ss_pred             Hh
Confidence            54

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=92.10  E-value=5.7  Score=39.46  Aligned_cols=92  Identities=12%  Similarity=0.098  Sum_probs=53.0

Q ss_pred             HHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcE
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDL  277 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Df  277 (311)
                      .+.|++++++.........|.+. .. ..|.+.|    +++|.+ |+++|++++.|=++.-.|...    ++.....+|+
T Consensus       184 ~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi  263 (425)
T PRK08088        184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL  263 (425)
T ss_pred             HHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE
Confidence            34577777521111123444443 22 3566666    666755 689999999999987314322    2222345786


Q ss_pred             EEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      .+|  =| .+| | --+|+++.++++.+
T Consensus       264 ~s~--sK-~l~-~G~rig~v~~~~~~~~  287 (425)
T PRK08088        264 TTF--AK-SIA-GGFPLAGVTGRAEVMD  287 (425)
T ss_pred             EEE--ec-ccc-CCCcceeeEecHHHHh
Confidence            554  69 555 3 12799998766543

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=91.28  E-value=4.9  Score=41.01  Aligned_cols=73  Identities=12%  Similarity=0.227  Sum_probs=44.8

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc-------cCCCCCC
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ-------LALALHR  274 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p-------ldl~~l~  274 (311)
                      .+.+++++....  ....-|.+ +.+ ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..-       .++. ..
T Consensus       238 l~~l~~~l~~~~--~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~~  314 (464)
T TIGR00699       238 LEEVEDLIKKWH--KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD-DP  314 (464)
T ss_pred             HHHHHHHHHhcC--CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC-CC
Confidence            455677776421  12333333 333 4688888    778865 699999999999996214311       1222 24


Q ss_pred             CcEEEEccccCc
Q 021539          275 PDLVLCTLDNNT  286 (311)
Q Consensus       275 ~Dfl~~S~HK~l  286 (311)
                      ||++++  =|++
T Consensus       315 PDi~t~--gK~l  324 (464)
T TIGR00699       315 PDMVTF--SKKF  324 (464)
T ss_pred             CCEEEe--hhhh
Confidence            999887  4834

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=91.10  E-value=0.43  Score=41.45  Aligned_cols=42  Identities=17%  Similarity=0.211  Sum_probs=32.4

Q ss_pred             HHHHHHHHHc----C----CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE
Q 021539          130 QARNRALKHC----G----LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL  174 (311)
Q Consensus       130 ~aR~~IA~~L----g----a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il  174 (311)
                      +.|+.||+++    |    ++++  +|++|+|+|+|+.+++..+ ..+||.|+
T Consensus        96 ~lR~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l-~dpGD~Vl  145 (153)
T PLN02994         96 NFRKAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCI-ADPGDAFL  145 (153)
T ss_pred             HHHHHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHH-cCCCCEEE
Confidence            5666666666    4    3444  5999999999999999987 36899876

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=90.37  E-value=0.72  Score=46.15  Aligned_cols=162  Identities=16%  Similarity=0.182  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHH--HHHhc---------CCCCCCCE--EEEcc-CcChHHHHHHHHhCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAML--MIGES---------YPFFKGNY--YLTII-SEESDYIKGFAAQKES  193 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealn--lv~~s---------~~~~~Gd~--Ils~~-eh~~~~~~~la~~~G~  193 (311)
                      +-++|+..|++||+++++  |+.-.|.+-.++  ++..+         -||.+.+.  ++++. ++.  .=..+++..|+
T Consensus        71 ipe~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYD--RHFai~E~~Gi  146 (425)
T PF12897_consen   71 IPEARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYD--RHFAITEHFGI  146 (425)
T ss_dssp             -HHHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--H--HHHHHHHHCT-
T ss_pred             hHHHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCch--HHHHHHHhhCc
Confidence            458999999999998765  776666654432  22222         25654433  34332 321  11234677899


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-H--H--HCCcEEEecccccCccCc
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-A--H--RNAWHVLLDATGLVFGED  266 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a--~--~~g~~vlvDAaQsv~G~~  266 (311)
                      +.+.||.+. +| -|.+.+++++..+.  .-+++-|++--  =+|+.+.=+.+.+ +  +  ..+..++-|=|=++ =+.
T Consensus       147 emi~VpM~~-dG-PDmD~Ve~LV~~D~--svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~v-HhL  221 (425)
T PF12897_consen  147 EMIPVPMTE-DG-PDMDMVEELVAEDP--SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAV-HHL  221 (425)
T ss_dssp             EEEEEEEET-TE-E-HHHHHHHTHTST--TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT--BS
T ss_pred             EEEecCCCC-CC-CCHHHHHHHHhcCC--ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceE-eec
Confidence            999999876 56 48999999986442  12578888733  4899999877754 3  2  35667777766554 332


Q ss_pred             ----c----cCC-----CCCCC--cEEEEccccCcCCCCCceEEEEEe
Q 021539          267 ----Q----LAL-----ALHRP--DLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       267 ----p----ldl-----~~l~~--Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                          +    +|+     ++-++  =|+.+|.-|=.|. =.|++++-..
T Consensus       222 ~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~-GaGva~~aaS  268 (425)
T PF12897_consen  222 YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFP-GAGVAFFAAS  268 (425)
T ss_dssp             SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-T-TSS-EEEEE-
T ss_pred             cccccchhhhHHHHHHHHcCCCCeEEEEecccccccC-CcceeeeecC
Confidence                1    111     01123  3778899993343 2367776544

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=90.15  E-value=10  Score=37.70  Aligned_cols=171  Identities=11%  Similarity=0.068  Sum_probs=83.8

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCCCCCCCEEEEcc-CcC--hHHHHHHHH-----hCCc-----EE
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYPFFKGNYYLTII-SEE--SDYIKGFAA-----QKES-----KV  195 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~~~~Gd~Ils~~-eh~--~~~~~~la~-----~~G~-----~V  195 (311)
                      +.-+++++++... ....+.|+.++|||+..++. +..+.....|++.. .+|  ......+..     +.+.     .+
T Consensus        87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~  165 (421)
T PRK06777         87 TLAERINALAPID-GPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSI  165 (421)
T ss_pred             HHHHHHHHhCCCC-CCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence            3335566665432 11259999999998876544 11122234565433 344  111111111     0011     12


Q ss_pred             EEEeCCCC-Cc---ccCHHHHHhhhhccCCCCCceEEEE-ecc-cccc-hhc---HHHHHH-HHHCCcEEEecccccCcc
Q 021539          196 IAAPETWL-DL---RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGT-RYS---MHWISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       196 ~~vp~~~~-~g---~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~-i~P---i~~I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                      ..+|.... .+   .-+.+.+++.++..........|.+ +.+ ..|. ..|   +++|.+ |+++|+++++|=+|.-.|
T Consensus       166 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g  245 (421)
T PRK06777        166 FHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA  245 (421)
T ss_pred             EEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence            22222110 00   1124557777753111112344443 333 4665 356   555644 689999999999988324


Q ss_pred             Ccc--cCCC--CCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          265 EDQ--LALA--LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       265 ~~p--ldl~--~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ...  +-..  ...+|+++  .=|.+-|+ --+|+++.++++.+
T Consensus       246 r~g~~~~~~~~~~~pDiv~--~sK~l~~G-~pigav~~~~~i~~  286 (421)
T PRK06777        246 RTGKLFAMEYYDVKPDLIT--MAKSLGGG-MPISAVVGRAEVMD  286 (421)
T ss_pred             cCCchhhhhhcCCCCCEEe--eehhhcCC-CceEEEEEcHHHHh
Confidence            322  1112  23589775  46833321 12899998876544

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=89.94  E-value=5.4  Score=39.94  Aligned_cols=88  Identities=15%  Similarity=0.075  Sum_probs=51.6

Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecccccc---hhcHHHHHH-HHHCCcEEEecccccCccCcccC--CC---CCCCcEE
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVVVNGT---RYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--LA---LHRPDLV  278 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~~tG~---i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l~---~l~~Dfl  278 (311)
                      ++++|+++++...  .....|.+-. +.|.   .-+++++.+ |+++|+++++|-+|.  |-..--  ..   ...||++
T Consensus       173 d~~~l~~~l~~~~--~~~aavi~Ep-v~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t--G~~~~~~g~~~~~gv~PDi~  247 (431)
T PRK06209        173 DIASLEALFEDHP--GRIACVILEP-ATADEPQDGFLHEVRRLCHENGALFILDEMIT--GFRWHMRGAQKLYGIVPDLS  247 (431)
T ss_pred             CHHHHHHHHHhCC--CCEEEEEEcc-ccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--cCCcCcchhhHHhCCCccee
Confidence            5688888886421  1234444322 2333   233677755 689999999999994  432211  11   2368986


Q ss_pred             EEccccCcCCC-CCceEEEEEeCCCCc
Q 021539          279 LCTLDNNTHAQ-PLKITCLLVRRKSFD  304 (311)
Q Consensus       279 ~~S~HK~l~G~-P~GiG~L~vr~~~~~  304 (311)
                      ++  =|++-|+ |  +|++..+++..+
T Consensus       248 t~--gK~lggG~p--~~av~~~~~i~~  270 (431)
T PRK06209        248 CF--GKALGNGFA--VSALAGKREYME  270 (431)
T ss_pred             ee--hhhhcCCcc--cEEEEEHHHHHh
Confidence            66  5844432 4  677777765543

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=89.64  E-value=15  Score=37.36  Aligned_cols=90  Identities=13%  Similarity=0.113  Sum_probs=53.6

Q ss_pred             HHHHHhhhhccC-CCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539          209 GSQLSQNFRRKC-KYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~-~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D  276 (311)
                      .+.+++.+.... +......|.+ +.+ .-|.+.|    ++++.+ |+++|+++++|=+|.-.|..-    .+--...||
T Consensus       215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PD  294 (464)
T PRK06938        215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD  294 (464)
T ss_pred             HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCC
Confidence            456777775311 0012333333 333 4677665    344544 689999999999998324322    111224699


Q ss_pred             EEEEccccCcCCC-CCceEEEEEeCCC
Q 021539          277 LVLCTLDNNTHAQ-PLKITCLLVRRKS  302 (311)
Q Consensus       277 fl~~S~HK~l~G~-P~GiG~L~vr~~~  302 (311)
                      +++++  |++-|+ |  +|+++.+++.
T Consensus       295 iv~~g--KglggG~P--lsAv~~~~~~  317 (464)
T PRK06938        295 VVVLS--KAIGGSLP--LAVVVYREWL  317 (464)
T ss_pred             EEEee--ccccCCCc--eEEEeehhHh
Confidence            99995  756543 4  8889988764

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=88.81  E-value=17  Score=36.58  Aligned_cols=71  Identities=21%  Similarity=0.317  Sum_probs=43.7

Q ss_pred             EEEEecc-cccchh-cHH---HHHH-HHHCCcEEEecccccCccCcc--cC--CCCCCCcEEEEccccCcCCC-CCceEE
Q 021539          227 LFSYPVV-VNGTRY-SMH---WISE-AHRNAWHVLLDATGLVFGEDQ--LA--LALHRPDLVLCTLDNNTHAQ-PLKITC  295 (311)
Q Consensus       227 LVs~~~~-~tG~i~-Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~p--ld--l~~l~~Dfl~~S~HK~l~G~-P~GiG~  295 (311)
                      ++.-+.+ ..|.+. |-+   +|.+ |+++|+++++|=+|.-.|..-  +-  --...||.+++  =|++-|+ |  +|+
T Consensus       210 vi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P--iga  285 (442)
T TIGR00709       210 VILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP--LAV  285 (442)
T ss_pred             EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc--cEE
Confidence            3333433 456664 433   4544 689999999999988225422  11  11246999996  4855432 4  888


Q ss_pred             EEEeCC
Q 021539          296 LLVRRK  301 (311)
Q Consensus       296 L~vr~~  301 (311)
                      ++.+++
T Consensus       286 v~~~~~  291 (442)
T TIGR00709       286 LLIAPE  291 (442)
T ss_pred             EEEchH
Confidence            998876

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06148 hypothetical protein; Provisional

Probab=88.37  E-value=8.9  Score=42.89  Aligned_cols=66  Identities=15%  Similarity=0.202  Sum_probs=46.4

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc-----cCCCCCCCcEEEEccccCcCCC-CCceEEEEEeCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ-----LALALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRK  301 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p-----ldl~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~  301 (311)
                      +-|.+.|    ++.+.+ |+++|+++++|=+|. + |..-     .......||++++  =|++-|+ |  +|+++.+++
T Consensus       796 ~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf-GRtG~~~~a~e~~gv~PDivt~--gK~lggG~P--lgav~~~~e  870 (1013)
T PRK06148        796 VAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF-GRVGSHWWAFETQGVVPDIVTM--GKPIGNGHP--MGAVVTTRE  870 (1013)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC-CCCCCcchhhhhcCCCcceeee--cccccCCcc--eEEEEEcHH
Confidence            4688877    677755 699999999999996 4 5332     1112346999888  4856543 4  899999877


Q ss_pred             CCc
Q 021539          302 SFD  304 (311)
Q Consensus       302 ~~~  304 (311)
                      ..+
T Consensus       871 i~~  873 (1013)
T PRK06148        871 IAD  873 (1013)
T ss_pred             HHh
Confidence            644

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=87.86  E-value=3.4  Score=41.30  Aligned_cols=140  Identities=10%  Similarity=0.050  Sum_probs=85.8

Q ss_pred             EeCCHHHHHHHHHhcCCCC-CCCEE-EEc--cCcChHHHHHHHHhCCcEEEEEe-CCCCCcccCHHHHHhhhhccCCCCC
Q 021539          150 FVPNYKEAMLMIGESYPFF-KGNYY-LTI--ISEESDYIKGFAAQKESKVIAAP-ETWLDLRIKGSQLSQNFRRKCKYTP  224 (311)
Q Consensus       150 FTsnaTealnlv~~s~~~~-~Gd~I-ls~--~eh~~~~~~~la~~~G~~V~~vp-~~~~~g~id~~~L~~~l~~~~~~~~  224 (311)
                      =|.|+|.|+.+.++-+... +...| ++.  .+.|.+    +.+..|.+|..=| .+.++..+|.+.+...|+.-.+   
T Consensus        99 Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~----If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~---  171 (396)
T COG1448          99 QTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA----IFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPE---  171 (396)
T ss_pred             ecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH----HHHhcCCceeeeeccccccccccHHHHHHHHHhCCC---
Confidence            4679999999988765321 22333 433  232322    2344699997766 4444455888888777775332   


Q ss_pred             ceEEE---EecccccchhcHH-H--HHH-HHHCCcEEEecc-cccCccCcccCCCC--------CCC-cEEEEccccC--
Q 021539          225 KGLFS---YPVVVNGTRYSMH-W--ISE-AHRNAWHVLLDA-TGLVFGEDQLALAL--------HRP-DLVLCTLDNN--  285 (311)
Q Consensus       225 t~LVs---~~~~~tG~i~Pi~-~--I~~-a~~~g~~vlvDA-aQsv~G~~pldl~~--------l~~-Dfl~~S~HK~--  285 (311)
                      ..+|.   |.|+=||.-..-+ |  |.+ .+++|++.++|- -|.+ |.. ++-+.        .++ =|++.|+-|.  
T Consensus       172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF-~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfg  249 (396)
T COG1448         172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGF-ADG-LEEDAYALRLFAEVGPELLVASSFSKNFG  249 (396)
T ss_pred             CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhh-ccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence            22333   3455599887764 3  444 489999999995 4777 654 44221        223 6788889994  


Q ss_pred             cCCCCCceEEEEEeC
Q 021539          286 THAQPLKITCLLVRR  300 (311)
Q Consensus       286 l~G~P~GiG~L~vr~  300 (311)
                      +||  ..+|++.+--
T Consensus       250 LYg--ERVGa~~vva  262 (396)
T COG1448         250 LYG--ERVGALSVVA  262 (396)
T ss_pred             hhh--hccceeEEEe
Confidence            444  3588887753

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=87.40  E-value=21  Score=36.12  Aligned_cols=64  Identities=16%  Similarity=0.322  Sum_probs=41.4

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCcEEEEccccCcCC-CCCceEEEEEeCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPDLVLCTLDNNTHA-QPLKITCLLVRRK  301 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~Dfl~~S~HK~l~G-~P~GiG~L~vr~~  301 (311)
                      ..|.+.|    ++.+.+ |+++|+++++|=+|.-.|..-    .......||+++++  |++-| +|  +|++..+++
T Consensus       237 ~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~P--i~av~~~~~  310 (459)
T PRK06931        237 EGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLP--LAVLGIKKE  310 (459)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCCcc--eeeeeeHHH
Confidence            4677665    445544 689999999999998224222    11123469999984  75554 35  677777765

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=87.38  E-value=3.5  Score=44.03  Aligned_cols=58  Identities=21%  Similarity=0.188  Sum_probs=39.5

Q ss_pred             cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceE
Q 021539          234 VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKIT  294 (311)
Q Consensus       234 ~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG  294 (311)
                      --|.+.|.+++.+ +|.+|.++++ |+-.+.-.+-=.-.++++|..+.|.+.  ||.|-|-|
T Consensus       258 t~G~i~d~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSsQR--FGVPlGYG  316 (1001)
T KOG2040|consen  258 TEGSVLDFDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSSQR--FGVPLGYG  316 (1001)
T ss_pred             CCCcccCHHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccccc--cCccccCC
Confidence            3799999999865 7999988554 443330111112345789999999999  66677654

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=83.53  E-value=15  Score=37.10  Aligned_cols=171  Identities=16%  Similarity=0.099  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCC--C-C--C-CEEEE-ccCcChHHHHHH--HHh--CCc--
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPF--F-K--G-NYYLT-IISEESDYIKGF--AAQ--KES--  193 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~--~-~--G-d~Ils-~~eh~~~~~~~l--a~~--~G~--  193 (311)
                      .-++-+.+.+.++-..-+ .|-|..|+|||+..++.. ..+  . .  + ..++. ...+|...+-.+  +..  ++.  
T Consensus       100 av~l~~~l~~~~~~~~~~-rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~  178 (433)
T KOG1401|consen  100 AVELEEVLSAVLGKGSAE-RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPF  178 (433)
T ss_pred             HHHHHHHHHhcccCCCcc-EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCC
Confidence            345666677777433222 499999999999877652 211  1 1  1 12442 233442222111  111  111  


Q ss_pred             -----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecccccchhcHH-----HH-HHHHHCCcEEEeccccc
Q 021539          194 -----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVVVNGTRYSMH-----WI-SEAHRNAWHVLLDATGL  261 (311)
Q Consensus       194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~~tG~i~Pi~-----~I-~~a~~~g~~vlvDAaQs  261 (311)
                           .|...+.      -|..+|+++++.+..+  ..-|.+ +.+=.|-+.|.+     .+ .+|+++|++|+.|=+|.
T Consensus       179 ~p~~p~v~~~~y------nd~t~l~k~~~~h~~~--IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t  250 (433)
T KOG1401|consen  179 DPIAPDVVTAEY------NDSTALEKLFESHKGE--IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT  250 (433)
T ss_pred             CCCCCceeeccc------CCHHHHHHHHHhCCCc--eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh
Confidence                 1111111      1467899999875311  122222 333134455542     23 34688999999999987


Q ss_pred             CccCcccCCC----CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCCC
Q 021539          262 VFGEDQLALA----LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSSTS  310 (311)
Q Consensus       262 v~G~~pldl~----~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~~  310 (311)
                      -.|..-.-..    ...||..++.  |.+-|+ -=+|+..+|+++.+..+|..
T Consensus       251 G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gG-lPigA~~v~~kV~~~i~~~~  300 (433)
T KOG1401|consen  251 GLGRLGYGWAQEYFGVTPDITTVA--KPLGGG-LPIGATGVRDKVAEMISPGD  300 (433)
T ss_pred             CccccchHHHHHHhCcCCcceeeh--hhccCC-ceeEEEeehHHHHhhcCCCC
Confidence            2122211111    1468988764  733333 23899999999999877754

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=81.77  E-value=17  Score=36.45  Aligned_cols=90  Identities=12%  Similarity=0.159  Sum_probs=49.0

Q ss_pred             HHHHHhhhhccCCCCCceEEEE-ec-c-cccch----hcHHHHHH-HHHCCcEEEecccccCccCcc----cCCCCCCCc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSY-PV-V-VNGTR----YSMHWISE-AHRNAWHVLLDATGLVFGEDQ----LALALHRPD  276 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~-~~-~-~tG~i----~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----ldl~~l~~D  276 (311)
                      .+++++.+....  .....|.+ +. + .-|.+    -+++.+.+ |+++|+++++|=+|.-.|..-    .+.....+|
T Consensus       194 ~~~l~~~l~~~~--~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD  271 (427)
T TIGR00508       194 ITPLAKLMELHS--DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD  271 (427)
T ss_pred             HHHHHHHHHhcC--CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC
Confidence            456667775321  12344444 32 3 23443    33455544 689999999999994113321    112235799


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++++  =|.+.|+=.-+++++.++++
T Consensus       272 i~~~--gK~l~gG~~p~~a~~~~~~~  295 (427)
T TIGR00508       272 ILCV--GKALTGGYMTLSATVTTDKV  295 (427)
T ss_pred             EEEe--chhhhcCcccceEEEEcHHH
Confidence            8885  68554430114667776554

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	311
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 49/296 (16%), Positives = 92/296 (31%), Gaps = 88/296 (29%)

Query: 75  TETG-IDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTSFKGNFISIPEIQARN 133
            ETG    + K        +F  ++ D   ++      ILSK+     + I   +  +  
Sbjct: 9   FETGEHQYQYKDILSVFEDAF-VDNFDCKDVQDM-PKSILSKE-EID-HIIMSKDAVSGT 64

Query: 134 RALKHCGLSEDEYLV-LFV-----PNYKEAMLMIGESY--PFFKGNYYLT----IISEES 181
             L    LS+ E +V  FV      NYK  M  I      P      Y+     + ++  
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 182 DYIKGFA--AQKESKVIAA-----PETWLDLR-IKGS-------QLSQNFRRKCKYTPKG 226
            + K      Q   K+  A     P   + +  + GS        +  +++ +CK     
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK----- 179

Query: 227 LFSYPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNT 286
              + +          W++  + N+   +L         + L   L++ D    +  +++
Sbjct: 180 -MDFKI---------FWLNLKNCNSPETVL---------EMLQKLLYQIDPNWTSRSDHS 220

Query: 287 HAQPLKI-----------------TCLLVRR--------KSFD-------TTSSTS 310
               L+I                  CLLV           +F+       TT    
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 49/280 (17%), Positives = 87/280 (31%), Gaps = 73/280 (26%)

Query: 58  EPEDTHD-LENLCVDEESTETGIDEKRKSSPK-SSSPSFNFNDLD-------KSQLEPSR 108
            PE   + L+ L          ID    S    SS+     + +        KS+   + 
Sbjct: 194 SPETVLEMLQKLLYQ-------IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 109 LL---DILSKK--------------TSFKGNFISIPEIQARNRALKHC--GLSEDEYLVL 149
           LL   ++ + K              T FK     +      + +L H    L+ DE   L
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 150 F--VPNYKEAML---MIGESYPFFKGNYYLTIISEE-------SDYIKGFAAQKESKVIA 197
                + +   L   ++  + P       L+II+E         D  K     K + +I 
Sbjct: 307 LLKYLDCRPQDLPREVLTTN-PRR-----LSIIAESIRDGLATWDNWKHVNCDKLTTII- 359

Query: 198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISEAHRNAWHVL-- 255
             E+ L+       L     RK  +    +F     +     S+ W      +   V+  
Sbjct: 360 --ESSLN------VLEPAEYRKM-FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 256 LDATGLVFGE-DQLALALHRPDLVL---CTLDNNT--HAQ 289
           L    LV  +  +  +++    + L     L+N    H  
Sbjct: 411 LHKYSLVEKQPKESTISIP--SIYLELKVKLENEYALHRS 448

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	311
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.95
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.94
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.93
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.89
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.89
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.88
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.87
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.87
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.87
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.87
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.87
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.87
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.87
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.86
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.86
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.86
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.86
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.85
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.85
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.85
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.85
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.85
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.85
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.85
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.84
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.84
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.84
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.84
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.83
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.83
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.83
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.81
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.81
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.8
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.79
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.79
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.78
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.77
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.77
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.77
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.76
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.76
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.75
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.75
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.75
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.74
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.74
1svv_A	359	Threonine aldolase; structural genomics, structura	99.73
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.72
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.71
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.71
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.71
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.71
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.7
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.7
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.7
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.7
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.69
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.69
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.69
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.69
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.69
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.69
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.69
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.69
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.67
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.67
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.67
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.66
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.66
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.66
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.66
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.65
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.65
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.65
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.65
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.65
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.64
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.64
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.64
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.63
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.62
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.62
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.62
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.62
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.62
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.62
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.62
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.61
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.59
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.59
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.59
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.59
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.59
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.59
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.59
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.58
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.58
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.58
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.58
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.58
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.58
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.57
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.57
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.56
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.56
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.56
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.56
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.55
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.55
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.55
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.55
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.54
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.54
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.54
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.54
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.53
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.53
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.53
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.53
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.53
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.53
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.53
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.52
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.52
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.52
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.52
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.51
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.51
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.51
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.51
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.51
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.51
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.5
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.49
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.49
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.49
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.49
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.48
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.48
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.48
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.48
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.47
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.47
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.46
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.46
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.46
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.45
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.44
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.44
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.43
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.43
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.43
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.43
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.42
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.42
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.41
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.4
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.4
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.4
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.39
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.39
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.38
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.36
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.34
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.34
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.33
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.33
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.32
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.32
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.31
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.3
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.3
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.3
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.28
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.27
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.26
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.26
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.26
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.25
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.25
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.25
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.24
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.24
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.24
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.24
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.23
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.23
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.23
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.23
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.17
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.17
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.17
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.16
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.16
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.15
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.13
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.12
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.09
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.07
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.05
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	98.57
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	98.94
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	98.93
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	98.9
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	98.89
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	98.86
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	98.86
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.86
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	98.86
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	98.84
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	98.82
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	98.81
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	98.81
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.79
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	98.76
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	98.68
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	98.67
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	98.67
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	98.65
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	98.63
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	98.59
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	98.58
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	98.57
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	98.54
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	98.53
3hmu_A	472	Aminotransferase, class III; structural genomics,	98.48
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	98.34
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	97.32
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	97.77
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	96.97
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	95.47
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	95.44
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	93.93
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	86.27

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.95  E-value=9.4e-29  Score=240.33  Aligned_cols=170  Identities=10%  Similarity=-0.015  Sum_probs=136.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      +..+...++++|+.+|++||++ ++++|+| |+|+|+|+|+++.++ +.+|++++ ...+|.++.|...+++.| +|.++
T Consensus        67 ~~~~~~~~~~ar~~la~ll~~~-~~~evif~t~~~T~a~n~ai~~l-~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v  143 (386)
T 3qm2_A           67 GKEFIQVAEEAEQDFRDLLNIP-SNYKVLFCHGGGRGQFAGVPLNL-LGDKTTADYVDAGYWAASAIKEAKKYC-APQII  143 (386)
T ss_dssp             ------CCHHHHHHHHHHHTCC-TTEEEEEEESCTTHHHHHHHHHH-CTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhc-cCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE
Confidence            5566677899999999999995 4467999 699999999999988 46888864 556666666666677789 99999


Q ss_pred             eCC--CCCcc-cCHHHHHhhhhccCCCCCceEEEEeccc--ccch-hcHHHHHHHHHCCcEEEecccccCccCcccCCCC
Q 021539          199 PET--WLDLR-IKGSQLSQNFRRKCKYTPKGLFSYPVVV--NGTR-YSMHWISEAHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       199 p~~--~~~g~-id~~~L~~~l~~~~~~~~t~LVs~~~~~--tG~i-~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      |++  . +|. +++++++..++++     ++||++++++  +|++ +||++|.    +|++++|||+|++ |+.|+|+++
T Consensus       144 ~~~~~~-~G~~~~~~~~~~~l~~~-----t~lV~~~h~et~tG~~i~pi~~i~----~g~~~~vDa~qs~-g~~pidv~~  212 (386)
T 3qm2_A          144 DAKITV-DGKRAVKPMREWQLSDN-----AAYLHYCPNETIDGIAIDETPDFG----PEVVVTADFSSTI-LSAPLDVSR  212 (386)
T ss_dssp             ECEEEE-TTEEEECCGGGCCCCTT-----CSCEEECSEETTTTEECCCCCCCC----TTCCEEEECTTTT-TSSCCCGGG
T ss_pred             ecCccc-CCCCCCchHHHhhcCCC-----CcEEEEECCcCCcCEecCchhhhc----CCCEEEEEccccc-CCCCCCccc
Confidence            987  3 454 6777787777764     6789988884  6996 9999986    7999999999999 999999998


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +  |++++|+|| |+| |+|+|+||+|+++.+...|
T Consensus       213 ~--~~~~~s~hK-~lG-P~G~g~l~v~~~~~~~~~~  244 (386)
T 3qm2_A          213 Y--GVIYAGAQK-NIG-PAGLTLVIVREDLLGKAHE  244 (386)
T ss_dssp             C--SEEEEETTT-TTC-CTTEEEEEEEGGGCSCCCT
T ss_pred             c--CEEEEeccc-ccC-CCccEEEEECHHHHhhhcc
Confidence            7  467899999 778 9999999999998776444

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.94  E-value=8.1e-28  Score=233.44  Aligned_cols=173  Identities=10%  Similarity=0.043  Sum_probs=141.3

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCC-CCCCEEE-EccCcChHHHHHHHHhCCcEEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPF-FKGNYYL-TIISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~-~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~  196 (311)
                      .+..+...++++|+.++++||++ ++++|+| |+|+|+|+|+++.++.. .+||+++ +..+|+++.+...+++.|+.+.
T Consensus        52 r~~~~~~~~~~ar~~la~ll~~~-~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~  130 (377)
T 3e77_A           52 RSSDFAKIINNTENLVRELLAVP-DNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINI  130 (377)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceE
Confidence            36677888999999999999995 4467999 58999999999998753 3488874 5566666666677788899888


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEeccc--ccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVV--NGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~--tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++|+++ ++.+++++++..++++     +++|++++++  +|+++|+  |  ++++|++++|||+|++ |+.|+|+++++
T Consensus       131 ~~~~~~-~~~~~~~~~~~~i~~~-----t~lV~~~h~et~tG~~~pi--i--~~~~~~~~~vD~~q~~-g~~~id~~~~~  199 (377)
T 3e77_A          131 VHPKLG-SYTKIPDPSTWNLNPD-----ASYVYYCANETVHGVEFDF--I--PDVKGAVLVCDMSSNF-LSKPVDVSKFG  199 (377)
T ss_dssp             CSCCCS-SSCSCCCGGGCCCCTT-----CSCEEEESEETTTTEECSS--C--CCCTTCCEEEECTTTT-TSSCCCGGGCS
T ss_pred             EeccCC-CcCCCCChHHhccCCC-----ccEEEEeCccCchheEchh--h--hccCCCEEEEEccccc-CCCCCchhhcC
Confidence            888876 3445666666666554     6799998884  7999999  4  5688999999999999 99999999765


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                        ++++|+|| |+| |+|+|+||+|+++.+...|
T Consensus       200 --~~~~s~~K-~~g-p~G~g~l~~~~~~l~~~~~  229 (377)
T 3e77_A          200 --VIFAGAQK-NVG-SAGVTVVIVRDDLLGFALR  229 (377)
T ss_dssp             --EEEEEGGG-TTS-CTTCEEEEEETTSCSCCCT
T ss_pred             --EEEEeccc-ccC-CCccEEEEEcHHHHhhccC
Confidence              69999999 778 9999999999999876544

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.93  E-value=1.4e-26  Score=223.11  Aligned_cols=165  Identities=13%  Similarity=0.112  Sum_probs=130.1

Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEE-EEccCcChHHHHHHHHhCCcEEE
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYY-LTIISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~I-ls~~eh~~~~~~~la~~~G~~V~  196 (311)
                      +.+..+...++++|+.++++||++ ++++|+| |+|+|+|+|+++.++.  +|+++ ....++..+.+...+++.|++|.
T Consensus        43 hr~~~~~~~~~~~r~~la~ll~~~-~~~~v~f~t~~~T~a~n~~~~~~~--~~~~~~~i~~~~~~~~~~~~a~~~G~~v~  119 (361)
T 3m5u_A           43 HRTKVFEEVHFGAQEKAKKLYELN-DDYEVLFLQGGASLQFAMIPMNLA--LNGVCEYANTGVWTKKAIKEAQILGVNVK  119 (361)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHC--CSSCEEEEECSHHHHHHHHHHHHTTCCEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCcHHHHHHHHHHhcC--CCCeEEEEeCCHHHHHHHHHHHHcCCceE
Confidence            346677888999999999999996 3457999 9999999999999885  56643 12222333345555677899999


Q ss_pred             EEeCCCCCcc--cCHHHHHhhhhccCCCCCceEEEEeccc--ccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCC
Q 021539          197 AAPETWLDLR--IKGSQLSQNFRRKCKYTPKGLFSYPVVV--NGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       197 ~vp~~~~~g~--id~~~L~~~l~~~~~~~~t~LVs~~~~~--tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ++++++ ++.  +++++  + |+++     ++||++++++  +|+++|.  |.  + .|++++|||+|++ |+.|+|++.
T Consensus       120 ~~~~~~-~g~~~~~~~~--~-l~~~-----t~lv~~~~~e~~tG~~~~~--i~--~-~~~~~~vD~~q~~-g~~~id~~~  184 (361)
T 3m5u_A          120 TVASSE-ESNFDHIPRV--E-FSDN-----ADYAYICSNNTIYGTQYQN--YP--K-TKTPLIVDASSDF-FSRKVDFSN  184 (361)
T ss_dssp             EEEECT-TTTSCSCCCC--C-CCTT-----SSEEEEESEETTTTEECSS--CC--C-CSSCEEEECGGGT-TSSCCCCTT
T ss_pred             EEeccc-CcCCCcCChh--h-cCCC-----CCEEEEeCCCCCcceeCCc--cc--c-cCCEEEEEccccc-CCCCCCccc
Confidence            999987 453  45555  3 6654     6799998884  6999882  43  2 4999999999999 999999984


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                        +||+++|+|| |+| |+|+|+||+|+++.+.
T Consensus       185 --~d~~~~s~~K-~~g-p~G~g~l~~~~~~~~~  213 (361)
T 3m5u_A          185 --IALFYGGVQK-NAG-ISGLSCIFIRKDMLER  213 (361)
T ss_dssp             --EEEEEEETTT-TSS-CTTCEEEEEEHHHHHH
T ss_pred             --CCEEEEechh-ccC-CCccEEEEEcHHHHhh
Confidence              7999999999 778 9999999999887654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.89  E-value=5e-22  Score=185.09  Aligned_cols=188  Identities=13%  Similarity=0.063  Sum_probs=150.4

Q ss_pred             hHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHH
Q 021539          108 RLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIK  185 (311)
Q Consensus       108 ~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~  185 (311)
                      .+.+.+.+. .++.+.......+++|+.+++++|++++..+|+||+|+|+|++ ++.++ +.+||.|+ ...+|++..+.
T Consensus        16 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~-~~~gd~vi~~~~~~~~~~~~   93 (384)
T 3zrp_A           16 DVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL-LKPNDKILVVSNGVFGDRWE   93 (384)
T ss_dssp             HHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG-CCTTCEEEEECSSHHHHHHH
T ss_pred             HHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh-cCCCCEEEEecCCcchHHHH
Confidence            355555433 2333444556678999999999999863346999999999999 88877 67899886 45566655566


Q ss_pred             HHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539          186 GFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       186 ~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                      .+++..|.++..+|.+. ++.+|.++|++.+++.    ++++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+.
T Consensus        94 ~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~  168 (384)
T 3zrp_A           94 QIFKRYPVNVKVLRPSP-GDYVKPGEVEEEVRKS----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSV  168 (384)
T ss_dssp             HHHTTSSCEEEEECCST-TCCCCHHHHHHHHHHS----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTT
T ss_pred             HHHHHcCCcEEEecCCC-CCCCCHHHHHHHHHhC----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccc
Confidence            66677899999999986 6789999999999872    1577776654  5999999999966 6999999999999999


Q ss_pred             ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                       |..++++...++|++++|+|||++| |.|+|+++++++..+
T Consensus       169 -~~~~~~~~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~~~~~  208 (384)
T 3zrp_A          169 -GAEEVKAEEWNVDVYLTASQKALGS-AAGLGLLLLSPKALS  208 (384)
T ss_dssp             -TTSCCCTTTTTCSEEEEETTSTTCC-CSSEEEEEECHHHHH
T ss_pred             -cCccccccccCCCEEEecCcccccC-CCceEEEEECHHHHH
Confidence             9999999888999999999995555 889999999887643

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.89  E-value=5.9e-22  Score=186.21  Aligned_cols=171  Identities=12%  Similarity=0.081  Sum_probs=139.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .....++.|+.+|+++|+++++  |+||+|+|+|+++++.++ +++|+.|+ ...+|++..+..+++..|+++..+|.+.
T Consensus        40 ~~~~~~~l~~~la~~~g~~~~~--v~~t~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~  116 (392)
T 2z9v_A           40 FQLLYEKVVDKAQKAMRLSNKP--VILHGEPVLGLEAAAASL-ISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY  116 (392)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSCC--EEESSCTHHHHHHHHHHH-CCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCE--EEEeCCchHHHHHHHHHh-cCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC
Confidence            3445679999999999997554  999999999999999987 67888876 4556665434445555699999999876


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVL  279 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~  279 (311)
                       ++.++.++|++.+++..   ++++|.+++.  .||.++|+++|.+ |+++|+++++|++|+. |..++++..+++|+++
T Consensus       117 -~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~-g~~~~~~~~~~~d~~~  191 (392)
T 2z9v_A          117 -NEAIDPQAVADMLKAHP---EITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSF-GGMKTHPEDCKADIYV  191 (392)
T ss_dssp             -TSCCCHHHHHHHHHHCT---TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTB-TTBSCCGGGGTCSEEE
T ss_pred             -CCCCCHHHHHHHHhcCC---CCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEccccc-CCcccccccccceEEE
Confidence             67899999999996311   1467766654  5899999999966 6999999999999999 9999998888899999


Q ss_pred             EccccCcCCCCCceEEEEEeCCCC
Q 021539          280 CTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       280 ~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|+|||++| |.|+|+++++++..
T Consensus       192 ~s~sK~~~~-~~g~G~l~~~~~~~  214 (392)
T 2z9v_A          192 TGPNKCLGA-PPGLTMMGVSERAW  214 (392)
T ss_dssp             ECSSSTTCC-CSCCEEEEECHHHH
T ss_pred             ecCcccccC-CCceeEEEECHHHH
Confidence            999996666 88999999987653

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.88  E-value=2.1e-21  Score=183.54  Aligned_cols=188  Identities=10%  Similarity=0.051  Sum_probs=150.6

Q ss_pred             chhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH
Q 021539          106 PSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~  183 (311)
                      +.++.+.+.+.. .+.........++.|+.+++++|++++. .++||+|+|+|+++++.++ +.+||.|+ ...+|+++.
T Consensus        23 ~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~-~~~~~~s~t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~  100 (416)
T 3isl_A           23 DPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRW-AYPIDGTSRAGIEAVLASV-IEPEDDVLIPIYGRFGYL  100 (416)
T ss_dssp             CHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSE-EEEEESCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHH
T ss_pred             CHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCc-EEEecCcHHHHHHHHHHHh-cCCCCEEEEecCCcccHH
Confidence            445666665542 2223334556789999999999997543 3459999999999999988 68899986 455666545


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...++..|+++..+|.+. ++.+|.++|++.+++ +     +++|.+++.  .+|.+.|+++|.+ |+++|+++++|++
T Consensus       101 ~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a  174 (416)
T 3isl_A          101 LTEIAERYGANVHMLECEW-GTVFDPEDIIREIKKVK-----PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAV  174 (416)
T ss_dssp             HHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECT
T ss_pred             HHHHHHhcCCeeEEEecCC-CCCCCHHHHHHHHhhCC-----CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence            6566777899999999986 678999999999984 4     467776654  6999999999966 6999999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |+. |..++++...++|++++|+|||++| |.|+|+++++++..
T Consensus       175 ~~~-~~~~~~~~~~~~d~~~~s~~K~l~g-~~g~g~~~~~~~~~  216 (416)
T 3isl_A          175 ATI-GGCEVKVDEWKIDAAIGGTQKCLSV-PSGMAPITYNERVA  216 (416)
T ss_dssp             TTT-TTSCCCTTTTTCSEEECCSSSTTCC-CSSEEEEEECHHHH
T ss_pred             ccc-cCCCcchhhcCCCEEEecCccccCC-CCCeEEEEECHHHH
Confidence            999 9999999989999999999996677 88999999987653

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.87  E-value=6.4e-22  Score=192.59  Aligned_cols=175  Identities=14%  Similarity=0.126  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEE-EccCcChH--HHHHHHHhCCcEE-----EE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYL-TIISEESD--YIKGFAAQKESKV-----IA  197 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V-----~~  197 (311)
                      .++.|+.+|+++|+++++  |+||+|+|+++++++.++  +..++++|+ ...+|++.  .+...++..|+++     ..
T Consensus       113 ~~~l~~~la~~~g~~~~~--v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~  190 (465)
T 3e9k_A          113 DESIVGLMKDIVGANEKE--IALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI  190 (465)
T ss_dssp             THHHHGGGHHHHTCCGGG--EEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred             HHHHHHHHHHHcCCCcCC--EEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence            457899999999998655  999999999999999887  333456676 55666643  3444566678764     44


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      +|.+. ++.++.++|++++++..  .++++|++++.  .||.++|+++|.+ ||++|+++++|++|++ |..++++.+++
T Consensus       191 ~~~~~-~~~~d~~~l~~~i~~~~--~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~-g~~~~~~~~~~  266 (465)
T 3e9k_A          191 KPREG-EETLRIEDILEVIEKEG--DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAV-GNVELYLHDWG  266 (465)
T ss_dssp             CCCTT-CSSCCHHHHHHHHHHHG--GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTT-TTSCCCHHHHT
T ss_pred             ecCCC-CCccCHHHHHHHHHhcC--CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhc-CCcCCchhhcC
Confidence            56654 67889999999997321  02678888765  5999999999966 6999999999999999 99999999899


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +||+++|+|||+.|+|.|+|+++++++..+...|
T Consensus       267 ~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~  300 (465)
T 3e9k_A          267 VDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP  300 (465)
T ss_dssp             CCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCC
T ss_pred             CCEEEECcccccccCCCceEEEEEcHHHHhhcCC
Confidence            9999999999554559899999999988765443

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.87  E-value=1.4e-21  Score=184.31  Aligned_cols=189  Identities=13%  Similarity=0.067  Sum_probs=150.1

Q ss_pred             chhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH
Q 021539          106 PSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~  183 (311)
                      +.++.+.+.+.. .+.........+++|+.+++++|+++ +..|+||+|+|+|+++++.++ +.+||.|+ ...+|+++.
T Consensus        25 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-~~~v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~  102 (411)
T 3nnk_A           25 DPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTEN-RWTMLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHL  102 (411)
T ss_dssp             CHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCC-SEEEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHH
T ss_pred             CHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHH
Confidence            344566654432 22233344567899999999999974 335899999999999999988 67899986 555666554


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      +...++..|.++..+|.+. ++.+|.++|++.+++.    ++++|.+.+.  .+|.+.|+++|.+ |+++|+++++|++|
T Consensus       103 ~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~  177 (411)
T 3nnk_A          103 LCEIARRCRAEVHTIEVPW-GEVFTPDQVEDAVKRI----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATA  177 (411)
T ss_dssp             HHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTT
T ss_pred             HHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHhhC----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCc
Confidence            5556677899999999975 6788999999999862    1467776654  6999999999966 69999999999999


Q ss_pred             cCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          261 LVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       261 sv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +. |..++++...++|++++|+|||++| |.|+|+++++++..
T Consensus       178 ~~-~~~~~~~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~~~~~  218 (411)
T 3nnk_A          178 SL-GGNPLETDVWGLDAVSAGMQKCLGG-PSGTSPITLSARME  218 (411)
T ss_dssp             TB-TTBCCCTTTTTCSEEECCSTTTTCC-CSSEEEEEECHHHH
T ss_pred             cc-CCcccchhccCCcEEEecCccccCC-CCceEEEEECHHHH
Confidence            99 9999999989999999999996677 88999999987654

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.87  E-value=1.4e-21  Score=183.63  Aligned_cols=169  Identities=9%  Similarity=0.021  Sum_probs=139.4

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .....+++|+.+++++|++++ +.|+||+|+|+|+++++.++ +.+|+.|+ ...+|+...+..+++..|.++..+|.+.
T Consensus        50 ~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~  127 (393)
T 2huf_A           50 TLKIMDDIKEGVRYLFQTNNI-ATFCLSASGHGGMEATLCNL-LEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV  127 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCS-EEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             HHHHHHHHHHHHHHHhCCCCC-cEEEEcCcHHHHHHHHHHHH-hCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC
Confidence            345668999999999999753 35999999999999999987 57889886 4556665434445566799999999875


Q ss_pred             CCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539          203 LDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                       ++.++.++|++.+++ +     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++|++ |..++++..+++|++
T Consensus       128 -~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~d~~  200 (393)
T 2huf_A          128 -GQSLSLDEIRDALLIHK-----PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASL-GGAPMFMDRWEIDAM  200 (393)
T ss_dssp             -TCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTB-TTBCCCTTTTTCSEE
T ss_pred             -CCCCCHHHHHHHHhccC-----CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEccccc-CCCCcchhhcCccEE
Confidence             678999999999976 4     457766544  5999999999966 6999999999999999 999999888889999


Q ss_pred             EEccccCcCCCCCceEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|+|||++| |.|+|+++++++.
T Consensus       201 ~~s~sK~l~g-~~G~G~~~~~~~~  223 (393)
T 2huf_A          201 YTGSQKVLGA-PPGITPVSFSHRA  223 (393)
T ss_dssp             ECCSSSTTCC-CSSCEEEEECHHH
T ss_pred             EECCCccccc-CCCeEEEEECHHH
Confidence            9999995566 8899999998654

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.87  E-value=8.3e-22  Score=182.71  Aligned_cols=169  Identities=22%  Similarity=0.182  Sum_probs=140.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC---CCCCEEE-EccCcChH--HHHHHHHhCCcE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF---FKGNYYL-TIISEESD--YIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~---~~Gd~Il-s~~eh~~~--~~~~la~~~G~~  194 (311)
                      +.......++.|+.+++++|++++  +|+||+|+|+|+++++.++.+   ++||.|+ +..+|++.  .+. .++..|++
T Consensus        38 ~~~~~~~~~~~~~~la~~~~~~~~--~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~~  114 (382)
T 4hvk_A           38 GFKAREAVQEAREKVAKLVNGGGG--TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFE  114 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTE--EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcC--eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCCE
Confidence            445566678999999999999764  499999999999999888753   6889886 55566632  233 33457999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      +..+|.+. ++.+|.++|++.++++     +++|.+++.  .+|.+.|+++|.+ |+++|+ +++|++|+. |..++++.
T Consensus       115 ~~~v~~~~-~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~-~~~~~~~~  186 (382)
T 4hvk_A          115 VEYIPVGK-YGEVDVSFIDQKLRDD-----TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASV-GQIEVDVE  186 (382)
T ss_dssp             EEEECBCT-TSCBCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTB-TTBCCCHH
T ss_pred             EEEeccCC-CCCcCHHHHHHHhccC-----ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhc-CCCCCCch
Confidence            99999985 7789999999999764     577777654  5999999999966 699999 999999999 99999988


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ..++|++++|+|| ++| |.|+|+++++++.
T Consensus       187 ~~~~d~~~~s~~K-~~g-~~g~g~~~~~~~~  215 (382)
T 4hvk_A          187 KIGADMLTISSND-IYG-PKGVGALWIRKEA  215 (382)
T ss_dssp             HHTCSEEEEESGG-GTS-CTTCEEEEEETTC
T ss_pred             hcCCCEEEEeHHH-hcC-CCceEEEEEcCcc
Confidence            7889999999999 888 8899999999864

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.87  E-value=4.4e-21  Score=179.41  Aligned_cols=173  Identities=14%  Similarity=0.090  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...++.|+.+++++|+++++  |+||+|+|+|+++++.++.+.+|+.|+ ...+|+..  .+..+++..|+++..+|.+.
T Consensus        59 ~~~~~l~~~la~~~g~~~~~--v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~  136 (390)
T 1elu_A           59 QLIAQLRQALAETFNVDPNT--ITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAA  136 (390)
T ss_dssp             HHHHHHHHHHHHHTTSCGGG--EEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCHHH--EEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCC
Confidence            45679999999999997654  999999999999999998667899886 44556532  24444555699999999852


Q ss_pred             -CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HH----HCCcEEEecccccCccCcccCCCCCC
Q 021539          203 -LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AH----RNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       203 -~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~----~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                       .++.++.++|++.++++     +++|.+++.  .+|.++|+++|.+ |+    ++|+++++|++|+. |..++++...+
T Consensus       137 ~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~-g~~~~~~~~~~  210 (390)
T 1elu_A          137 TLNQGDAAAVLANHLGPK-----TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSA-GSLPLDFSRLE  210 (390)
T ss_dssp             GSSSSCHHHHHHTTCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTB-TTBCCCTTTSC
T ss_pred             CCCccchHHHHHHhcCCC-----ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEccccc-CCcCCChhhcC
Confidence             25678899999888754     567776654  5999999999966 68    89999999999999 99999988889


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCcccC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTS  307 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~  307 (311)
                      +|++++|+|||++| |.|+|+++++++..+...
T Consensus       211 ~d~~~~s~~K~~~~-~~g~G~~~~~~~~~~~~~  242 (390)
T 1elu_A          211 VDYYAFTGHKWFAG-PAGVGGLYIHGDCLGEIN  242 (390)
T ss_dssp             CSEEEEESSSTTCC-CTTCEEEEECTTTGGGCC
T ss_pred             CCEEEccccccccC-CCceEEEEECHHhHhhcC
Confidence            99999999997777 889999999998766433

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.87  E-value=2.2e-21  Score=179.08  Aligned_cols=169  Identities=10%  Similarity=0.021  Sum_probs=136.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      +.......++.|+.+|+++|++++  .|+||+|+|+|+++++.++ +.+|++|+ ...+|++..+..+++..|+++..+|
T Consensus        29 ~~~~~~~~~~l~~~la~~~g~~~~--~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~  105 (352)
T 1iug_A           29 TEAAREVFLKARGLLREAFRTEGE--VLILTGSGTLAMEALVKNL-FAPGERVLVPVYGKFSERFYEIALEAGLVVERLD  105 (352)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSSE--EEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCc--eEEEcCchHHHHHHHHHhc-cCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEe
Confidence            344445568999999999999754  5999999999999999987 57899886 4556665434445566799999999


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCCCC
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      .+. ++.++.++|++   ++     +++|.+++.  .||.++|+++|.+ |+++  |+++++|++|+. |..++++...+
T Consensus       106 ~~~-~~~~d~~~l~~---~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~-~~~~~~~~~~~  175 (352)
T 1iug_A          106 YPY-GDTPRPEDVAK---EG-----YAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSL-LVGEVALEAMG  175 (352)
T ss_dssp             CCT-TCCCCTTTSCC---SS-----CSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTB-TTBCCCSGGGT
T ss_pred             CCC-CCCCCHHHHhc---cC-----CcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccc-cCcceeccccC
Confidence            875 66788877765   22     457766544  5899999999966 6888  999999999999 99999988778


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|++++|+|||++| |.|+|+++++++..
T Consensus       176 ~d~~~~s~~K~~~~-~~g~G~~~~~~~~~  203 (352)
T 1iug_A          176 VDAAASGSQKGLMC-PPGLGFVALSPRAL  203 (352)
T ss_dssp             CSEEEEESSSTTCC-CSCEEEEEECHHHH
T ss_pred             eeEEEecCcccccC-CCceeEEEECHHHH
Confidence            99999999997666 88999999987654

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=6.2e-22  Score=187.27  Aligned_cols=173  Identities=12%  Similarity=0.033  Sum_probs=140.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEE-EccCcCh--HHHHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYL-TIISEES--DYIKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V  195 (311)
                      |.......+++|+.+|+++|+++++  |+||+|+|+++++++.++  .+.+|+.|+ +..+|++  ..+..+++..|+++
T Consensus        64 ~~~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v  141 (406)
T 3cai_A           64 ARRSAAVLDAAREAVADLVNADPGG--VVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKV  141 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGG--EEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCe--EEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeE
Confidence            3334556789999999999997554  999999999999998887  457889886 5556663  34555555569999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ..+|.+..++.++.++|++.++++     +++|.+++.  .||.++|+++|.+ |+++|+++++|++|+. |..++++..
T Consensus       142 ~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~-g~~~~~~~~  215 (406)
T 3cai_A          142 KWAEVDIETGELPTWQWESLISKS-----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAA-PYRLLDIRE  215 (406)
T ss_dssp             EEECCCTTTCCCCGGGHHHHCCTT-----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTT-TTCCCCHHH
T ss_pred             EEEecCcccCCcCHHHHHHHhCCC-----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEccccc-CCCCCCchh
Confidence            999987346788999999998754     577777654  5899999999966 6999999999999999 999888877


Q ss_pred             CCCcEEEEccccCcCCCCCceE-EEEEeCCCCc
Q 021539          273 HRPDLVLCTLDNNTHAQPLKIT-CLLVRRKSFD  304 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG-~L~vr~~~~~  304 (311)
                      +++|++++|+|| ++| |. +| ++++++++.+
T Consensus       216 ~~~d~~~~s~~K-~~g-~~-~G~~~~~~~~~~~  245 (406)
T 3cai_A          216 TDADVVTVNAHA-WGG-PP-IGAMVFRDPSVMN  245 (406)
T ss_dssp             HCCSEEEEEGGG-GTS-CS-CEEEEESCHHHHH
T ss_pred             cCCCEEEeehhh-hcC-CC-cCeEEEEehHHHh
Confidence            889999999999 888 85 99 9998876543

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.86  E-value=5.3e-21  Score=175.82  Aligned_cols=172  Identities=10%  Similarity=-0.008  Sum_probs=138.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      +.......+++|+.+++++|++.+.+.|+||+|+|+|+++++.++. .  ++|+ +..+|++..+...++..|+++..+|
T Consensus        28 ~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~-~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~  104 (353)
T 2yrr_A           28 DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD-R--GPVLVLVNGAFSQRVAEMAALHGLDPEVLD  104 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS-C--CCEEEEECSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc-C--CcEEEEcCCCchHHHHHHHHHcCCceEEEe
Confidence            3444455789999999999996333469999999999999998873 3  5665 5556665434455667799999999


Q ss_pred             CCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          200 ETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      .+. ++.++.++|++.+++ +     +++|.+++.  .||.++|+++|.+ |+++|+++++|++|+. |..++++..+++
T Consensus       105 ~~~-~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~  177 (353)
T 2yrr_A          105 FPP-GEPVDPEAVARALKRRR-----YRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTL-GMLPFSMRAMGV  177 (353)
T ss_dssp             CCT-TSCCCHHHHHHHHHHSC-----CSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT-TTSCCCHHHHTC
T ss_pred             CCC-CCCCCHHHHHHHHHhCC-----CCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCccc-ccccccccccCc
Confidence            975 678999999999986 4     457766654  5899999999966 7999999999999999 988888877789


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |++++|+|||++| |.|+|+++++++..
T Consensus       178 d~~~~s~~K~~~~-~~g~G~~~~~~~~~  204 (353)
T 2yrr_A          178 DYAFTGSQKCLSA-PPGLAPIAASLEAR  204 (353)
T ss_dssp             SEEECCTTSTTCC-CSSCEEEEECHHHH
T ss_pred             eEEEecCcccccC-CCceEEEEECHHHH
Confidence            9999999996666 88999999987654

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.86  E-value=1.6e-21  Score=182.90  Aligned_cols=170  Identities=18%  Similarity=0.197  Sum_probs=140.3

Q ss_pred             hhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcCh--HHHHHHHHhCCcEEE
Q 021539          124 ISIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEES--DYIKGFAAQKESKVI  196 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~  196 (311)
                      .....++.|+.+|+++|+ +++  .|+||+|+|+|+++++.++.   +.+|+.|+ ...+|++  ..+..+++..|+++.
T Consensus        65 ~~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~  142 (406)
T 1kmj_A           65 ATEKMENVRKRASLFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELR  142 (406)
T ss_dssp             HHHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCCCC--eEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEE
Confidence            455567999999999999 444  59999999999999999884   57889886 5556763  334555566699999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      .+|.+. ++.++.++|++.++++     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+. |..++++...
T Consensus       143 ~~~~~~-~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~-g~~~~~~~~~  215 (406)
T 1kmj_A          143 VIPLNP-DGTLQLETLPTLFDEK-----TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAV-MHHPVDVQAL  215 (406)
T ss_dssp             EECBCT-TSCBCGGGHHHHCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT-TTSCCCHHHH
T ss_pred             EEecCC-CCCcCHHHHHHHhccC-----CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhc-CCCCCccccc
Confidence            999875 6778999999998754     577777654  5899999999966 7999999999999999 9988888777


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++|++++|+|| ++| |.|+|++++++++.+
T Consensus       216 ~~d~~~~s~~K-~~g-~~G~G~~~~~~~~~~  244 (406)
T 1kmj_A          216 DCDFYVFSGHK-LYG-PTGIGILYVKEALLQ  244 (406)
T ss_dssp             TCSEEEEEGGG-TTS-CTTCEEEEECHHHHH
T ss_pred             CCCEEEEEchh-ccC-CCCcEEEEEeHHHHh
Confidence            89999999999 888 889999999876543

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.86  E-value=8.1e-22  Score=187.31  Aligned_cols=179  Identities=8%  Similarity=-0.011  Sum_probs=139.3

Q ss_pred             cCCCC-cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhC
Q 021539          114 SKKTS-FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQK  191 (311)
Q Consensus       114 ~~~ss-~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~  191 (311)
                      .+.+. +.+......++++|+.+++++|++ +  .|+||+|+|+|+++++..+  .+|++|+ ...+|+...+..+++..
T Consensus        22 ~~~~~~h~~~~~~~~~~~~~~~l~~~~~~~-~--~v~~~~sgt~a~~~~~~~~--~~gd~vi~~~~~~~~~~~~~~~~~~   96 (379)
T 3ke3_A           22 TDRALNHMSKAFQEVMNDLLSNLKTVYNAE-A--AVIIPGSGTYGMEAVARQL--TIDEDCLIIRNGWFSYRWTQILEKG   96 (379)
T ss_dssp             CTTSCCTTSHHHHHHHHHHHHHHHHHHTCS-E--EEEEESCHHHHHHHHHHHH--CTTCEEEEEECSHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHhCCC-C--EEEEcCChhHHHHHHHHhC--CCCCeEEEEeCCchhHHHHHHHHHh
Confidence            34433 346777788899999999999996 3  5999999999999988765  4789986 55667765554555544


Q ss_pred             C--cEEEEEeCCCC--------CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEE
Q 021539          192 E--SKVIAAPETWL--------DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVL  255 (311)
Q Consensus       192 G--~~V~~vp~~~~--------~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vl  255 (311)
                      |  .++..++.+..        .+.++.++|+++++..    ++++|++.+.  .+|.++|   +++|.+ ||++|++++
T Consensus        97 g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li  172 (379)
T 3ke3_A           97 KFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLV  172 (379)
T ss_dssp             CCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEE
T ss_pred             CCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhc----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEE
Confidence            5  48888876421        1358999999999642    1567877766  5899999   888866 699999999


Q ss_pred             ecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          256 LDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       256 vDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|++|+  |..++++..+++|++++|+|| ++|+|.|+|+++++++..+
T Consensus       173 ~D~~~~--g~~~~~~~~~~~d~~~~s~~K-~l~~~~g~g~~~~~~~~~~  218 (379)
T 3ke3_A          173 IDCIAS--GCVWLDMKELGIDVLISAPQK-GWSSTPCAGLVMLSAAAIK  218 (379)
T ss_dssp             EECTTC--TTCCCCHHHHTCSEEEECTTT-TTCSCCCEEEEEECHHHHH
T ss_pred             EEeccc--CCccccccccCCCEEEecchh-hcCCCCceEEEEECHHHHH
Confidence            999997  778999988899999999999 5544999999999876543

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.86  E-value=7.4e-21  Score=177.61  Aligned_cols=171  Identities=10%  Similarity=0.064  Sum_probs=135.1

Q ss_pred             HHHHHHHHHHHHcCCCC--CCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC-
Q 021539          127 PEIQARNRALKHCGLSE--DEYLVLFVPNYKEAMLMIGESYP--FFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE-  200 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~--dey~VvFTsnaTealnlv~~s~~--~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~-  200 (311)
                      ...+.|+.++++++...  +...|+||+|+|+|+++++.++.  +.+|++|+.. ..++...+...++..|+++..+|. 
T Consensus        39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~  118 (385)
T 2bkw_A           39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL  118 (385)
T ss_dssp             HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC
Confidence            45678889999988741  12359999999999999998874  3689997543 444433333445667999999998 


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCccCcccCCCCCCC
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +. ++.+|.++|++++++.    ++++|.+++.  .||.++|+++|.+ |+++  |+++++|++|+. |..++++..+++
T Consensus       119 ~~-~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~  192 (385)
T 2bkw_A          119 KI-GESVPLELITEKLSQN----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSI-GCEEFEFDEWGV  192 (385)
T ss_dssp             ST-TSCCCHHHHHHHHHHS----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTT-TTSCCCTTTTTC
T ss_pred             CC-CCCCCHHHHHHHHhcC----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECcccc-CCccccccccCc
Confidence            65 6789999999999762    1467776654  5899999999966 6888  999999999999 999999988899


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |++++|+|||++| |.|+|+++++++..+
T Consensus       193 d~~~~s~~K~~~~-~~G~G~~~~~~~~~~  220 (385)
T 2bkw_A          193 DFALTASQKAIGA-PAGLSISLCSSRFMD  220 (385)
T ss_dssp             SEEEEESSSTTCC-CSCEEEEEECHHHHH
T ss_pred             eEEEecCcccccc-CCcceEEEEcHHHHH
Confidence            9999999995556 889999999876543

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.85  E-value=1.4e-20  Score=173.77  Aligned_cols=171  Identities=13%  Similarity=0.001  Sum_probs=134.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-Ec-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ...++.|+.+|+++|.+.+...|+||+|+|+|+++++.++ ..+|+.|+ .. ..|.. .+...++..|+++..+|.+. 
T Consensus        37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~-~~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~-  113 (366)
T 1m32_A           37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSA-LGPQDKVLIVSNGAYGA-RMVEMAGLMGIAHHAYDCGE-  113 (366)
T ss_dssp             TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHS-CCTTCCEEEEESSHHHH-HHHHHHHHHTCCEEEEECCT-
T ss_pred             HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHh-cCCCCeEEEEeCCCccH-HHHHHHHHhCCceEEEeCCC-
Confidence            4567999999999994212135999999999999999988 46788765 32 33332 23344455699999999875 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                      ++.+|.++|++.++++.   .+++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+. |..++++...++|++++
T Consensus       114 ~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~-~~~~~~~~~~~~di~~~  189 (366)
T 1m32_A          114 VARPDVQAIDAILNADP---TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF-GGIPMDIAALHIDYLIS  189 (366)
T ss_dssp             TSCCCHHHHHHHHHHCT---TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT-TTSCCCTTTTTCSEEEE
T ss_pred             CCCCCHHHHHHHHhcCC---CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc-cCcCccccccCccEEEe
Confidence            67799999999998631   1456665544  4799999999966 6999999999999999 99999988788999999


Q ss_pred             ccccCcCCCCCceEEEEEeCCCCc
Q 021539          281 TLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |+|||++| |.|+|+++++++..+
T Consensus       190 s~~K~~~~-~~g~G~~~~~~~~~~  212 (366)
T 1m32_A          190 SANKCIQG-VPGFAFVIAREQKLA  212 (366)
T ss_dssp             ESSSTTCC-CSSEEEEEEEHHHHT
T ss_pred             cCcccccC-CCceEEEEECHHHHH
Confidence            99995556 889999999986543

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.85  E-value=6.5e-21  Score=180.00  Aligned_cols=168  Identities=18%  Similarity=0.161  Sum_probs=139.1

Q ss_pred             hHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcEEEE
Q 021539          125 SIPEIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ....++.|+.+|+++|+ +++  .|+||+|+|+|+++++.++.   +.+|+.|+ ...+|+..  .+..+++..|+++..
T Consensus        71 ~~~~~~l~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~  148 (420)
T 1t3i_A           71 TDAYEAVRNKVAKFINARSPR--EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKF  148 (420)
T ss_dssp             HHHHHHHHHHHHHHTTCSCGG--GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCCC--eEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEE
Confidence            45678999999999999 544  49999999999999999883   57889886 55566642  244555566999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      +|.+. ++.++.++|++.++++     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+. |..++++..++
T Consensus       149 v~~~~-~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~  221 (420)
T 1t3i_A          149 VQLDE-QESFDLEHFKTLLSEK-----TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSA-PHYPLDVQLID  221 (420)
T ss_dssp             ECBCT-TSSBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTT-TTSCCCHHHHT
T ss_pred             eccCC-CCCcCHHHHHHhhCCC-----ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhcc-CCccCchhhcC
Confidence            99874 6789999999998754     567776654  5999999999966 6999999999999999 98888887788


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|++++|+|| ++| |.|+|++++++++.
T Consensus       222 ~di~~~s~sK-~~~-~~g~G~~~~~~~~~  248 (420)
T 1t3i_A          222 CDWLVASGHK-MCA-PTGIGFLYGKEEIL  248 (420)
T ss_dssp             CSEEEEEGGG-TTS-CTTCEEEEECHHHH
T ss_pred             CCEEEEehhh-hcC-CCceEEEEEchHHH
Confidence            9999999999 998 88999999987653

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.85  E-value=3e-20  Score=174.78  Aligned_cols=187  Identities=11%  Similarity=0.035  Sum_probs=144.4

Q ss_pred             chhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH
Q 021539          106 PSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~  183 (311)
                      +..+.+.+.... +..........++.|+.+|+++|++++ ++|+||+|+|+|+++++.++ +.+|+.|+ ...+|+...
T Consensus        30 ~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~~~  107 (396)
T 2ch1_A           30 SKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENR-ATMCVSGSAHAGMEAMLSNL-LEEGDRVLIAVNGIWAER  107 (396)
T ss_dssp             CHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHH
T ss_pred             CHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCC-cEEEECCcHHHHHHHHHHHh-cCCCCeEEEEcCCcccHH
Confidence            344556664432 111223334568999999999999764 25999999999999999887 57889886 445665443


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...++..|++++.+|.+. ++.++.++|++.+++ +     +++|.+++.  .||.++|+++|.+ |+++|+++++|++
T Consensus       108 ~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea  181 (396)
T 2ch1_A          108 AVEMSERYGADVRTIEGPP-DRPFSLETLARAIELHQ-----PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAV  181 (396)
T ss_dssp             HHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred             HHHHHHHcCCceEEecCCC-CCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcc
Confidence            3345667799999999875 678999999999986 4     456666544  5999999999966 6999999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |++ |..++++..+++|++++|+|||++| |.|+|+++++++.
T Consensus       182 ~~~-g~~~~~~~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~~~  222 (396)
T 2ch1_A          182 ASL-CGVPFYMDKWEIDAVYTGAQKVLGA-PPGITPISISPKA  222 (396)
T ss_dssp             TTB-TTBCCCTTTTTCCEEECCCC-CCCC-CSSCEEEEECHHH
T ss_pred             ccc-cCCccchhhcCcCEEEEcCCccccC-CCCeEEEEECHHH
Confidence            999 9999999888999999999995555 8899999998643

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.85  E-value=2.2e-20  Score=174.01  Aligned_cols=170  Identities=19%  Similarity=0.166  Sum_probs=137.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEEE-ccCcChH--HHHHHHHhCCcE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYLT-IISEESD--YIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~  194 (311)
                      +.......++.|+.+|+++|+++++  |+||+|+|+|+++++.++.   +.+|+.|+. ..+|++.  .+. .++..|.+
T Consensus        39 ~~~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~  115 (384)
T 1eg5_A           39 GIEANLHMEKAREKVAKVLGVSPSE--IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFK  115 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCGGG--EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCe--EEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCE
Confidence            3344556689999999999997654  9999999999999988875   268898864 4455532  232 23456999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC--cEEEecccccCccCcccC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA--WHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g--~~vlvDAaQsv~G~~pld  269 (311)
                      +..+|.+. ++.++.++|++.++++     +++|.+++.  .+|.++|+++|.+ |+++|  +++++|++|++ |..+++
T Consensus       116 ~~~v~~~~-~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~-~~~~~~  188 (384)
T 1eg5_A          116 VKYVPVDS-RGVVKLEELEKLVDED-----TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTI-GKIPFS  188 (384)
T ss_dssp             EEECCBCT-TSCBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTT-TTSCCC
T ss_pred             EEEEccCC-CCccCHHHHHHHhCCC-----CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhc-CCcccC
Confidence            99999875 6789999999998754     567766544  5899999999966 69999  99999999999 988888


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +..+++|++++|+|| ++| |.|+|+++++++.
T Consensus       189 ~~~~~~di~~~s~sK-~~g-~~G~G~~~~~~~~  219 (384)
T 1eg5_A          189 LEKLEVDYASFSAHK-FHG-PKGVGITYIRKGV  219 (384)
T ss_dssp             CTTTCCSEEEEEGGG-GTS-CTTCEEEEECTTS
T ss_pred             chhcCCCEEEecHHH-hcC-CCceEEEEEcCCC
Confidence            887889999999999 888 8899999999875

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.85  E-value=8.2e-21  Score=177.09  Aligned_cols=169  Identities=22%  Similarity=0.167  Sum_probs=137.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH--HHHHHHHhCCcE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD--YIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~  194 (311)
                      +.......++.|+.+|+++|++++  .|+||+|+|+|+++++.++.   ..+|+.|+ ...+|++.  .+. .++..|++
T Consensus        38 ~~~~~~~~~~l~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~  114 (382)
T 4eb5_A           38 GFKAREAVQEAREKVAKLVNGGGG--TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFE  114 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTE--EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCC--eEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcE
Confidence            444456678999999999999754  59999999999999988874   25788886 45566532  222 23446999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      +..+|.++ ++.+|.++|++.++++     +++|.+++.  .||.++|+++|.+ |+++|++ ++|++|++ |..++++.
T Consensus       115 ~~~v~~~~-~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~-g~~~~~~~  186 (382)
T 4eb5_A          115 VEYIPVGK-YGEVDVSFIDQKLRDD-----TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASV-GQIEVDVE  186 (382)
T ss_dssp             EEEECBCT-TSCBCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTB-TTBCCCHH
T ss_pred             EEEeccCC-CCccCHHHHHHHhcCC-----CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhc-CCcccCcc
Confidence            99999875 6789999999998754     577777654  5899999999966 6999999 99999999 99888887


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      .+++|++++|+|| ++| |.|+|+++++++.
T Consensus       187 ~~~~di~~~s~sK-~~g-~~g~G~~~~~~~~  215 (382)
T 4eb5_A          187 KIGADMLTISSND-IYG-PKGVGALWIRKEA  215 (382)
T ss_dssp             HHTCSEEEEETGG-GTC-CSSCEEEEEETTC
T ss_pred             ccCCCEEEeehHH-hcC-CCceEEEEEcccc
Confidence            7789999999999 788 8899999999873

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.85  E-value=2.9e-20  Score=175.02  Aligned_cols=188  Identities=10%  Similarity=0.058  Sum_probs=147.3

Q ss_pred             chhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH
Q 021539          106 PSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~  183 (311)
                      +..+.+.+.+.. ...+.......+++++.+++++|++++ ++|+||+|+|+|+++++.++ +.+|+.|+ ....|+.+.
T Consensus        46 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~al~~~~~~~-~~~gd~Vl~~~~~~~~~~  123 (393)
T 1vjo_A           46 HPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENP-LTIAVSGTGTAAMEATIANA-VEPGDVVLIGVAGYFGNR  123 (393)
T ss_dssp             CHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHH-CCTTCEEEEEESSHHHHH
T ss_pred             CHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCC-cEEEEeCchHHHHHHHHHhc-cCCCCEEEEEcCChhHHH
Confidence            344556664432 122333455678999999999999654 25999999999999999887 57889886 444555443


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...++..|+++..+|.+. ++.++.++|++.+++ +     +++|.++..  .+|.+.|+++|.+ |+++|+++++|++
T Consensus       124 ~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea  197 (393)
T 1vjo_A          124 LVDMAGRYGADVRTISKPW-GEVFSLEELRTALETHR-----PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV  197 (393)
T ss_dssp             HHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred             HHHHHHHcCCceEEEecCC-CCCCCHHHHHHHHhhCC-----ceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence            5555667799999999876 677999999999986 4     456666544  5999999999966 6999999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |++ |..++++...++|++++|+|| ++|+|.|+|+++++++..
T Consensus       198 ~~~-g~~~~~~~~~~~di~~~s~sK-~l~~~~~~G~l~~~~~~~  239 (393)
T 1vjo_A          198 TSL-GGVPIFLDAWGVDLAYSCSQK-GLGCSPGASPFTMSSRAI  239 (393)
T ss_dssp             TTT-TTSCCCTTTTTCSEEECCSSS-TTCSCSSCEEEEECHHHH
T ss_pred             ccc-cCcCCcccccCccEEEEcCcc-cccCCCceEEEEECHHHH
Confidence            999 999999988899999999999 554488999999987643

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.85  E-value=1.8e-20  Score=175.07  Aligned_cols=187  Identities=13%  Similarity=0.111  Sum_probs=142.4

Q ss_pred             hhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHH
Q 021539          107 SRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDY  183 (311)
Q Consensus       107 ~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~  183 (311)
                      .++.+.+... ..+.+.......+++|+.+++++|++++. +++| |+|+|+|+++++.++ ..+||.|++. ..++...
T Consensus        32 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~~i~~~~ggt~al~~~~~~~-~~~gd~vi~~~~~~~~~~  109 (376)
T 3f0h_A           32 EEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGS-KAVFMTCSSTGSMEAVVMNC-FTKKDKVLVIDGGSFGHR  109 (376)
T ss_dssp             HHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTC-EEEEESSCHHHHHHHHHHHH-CCTTCCEEEEESSHHHHH
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCc-eEEEEcCChhHHHHHHHHhc-cCCCCeEEEEeCChhhHH
Confidence            3455555432 22223344456789999999999997543 4555 999999999999887 4788988643 3334333


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      +...+...|.++..+|.+. ++.+|.++|++.++++     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++|
T Consensus       110 ~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~  183 (376)
T 3f0h_A          110 FVQLCEIHEIPYVALKLEH-GKKLTKEKLYEYDNQN-----FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVS  183 (376)
T ss_dssp             HHHHHHHTTCCEEEEECCT-TCCCCHHHHHTTTTSC-----CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred             HHHHHHHcCCceEEEeCCC-CCCCCHHHHHHhhccC-----ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCc
Confidence            3345666799999999875 5678999999887654     466666533  6999999999976 69999999999999


Q ss_pred             cCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          261 LVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       261 sv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +. |..++++...++|++++|+|| ++|+|.|+|+++++++..
T Consensus       184 ~~-~~~~~~~~~~~~d~~~~s~~K-~l~~~~G~g~~~~~~~~~  224 (376)
T 3f0h_A          184 AF-LADPFNMNECGADVMITGSQK-VLACPPGISVIVLAPRGV  224 (376)
T ss_dssp             TT-TTSCCCHHHHTCSEEEEETTT-TTCCCSSCEEEEECHHHH
T ss_pred             cc-cCccccccccCccEEEecCcc-cccCCCceEEEEECHHHH
Confidence            99 999988887889999999999 665588999999987653

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.84  E-value=2.3e-20  Score=175.74  Aligned_cols=167  Identities=17%  Similarity=0.105  Sum_probs=138.8

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C--CCCC-EEE-EccCcChH--HHHHHHHhCCc
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F--FKGN-YYL-TIISEESD--YIKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~--~~Gd-~Il-s~~eh~~~--~~~~la~~~G~  193 (311)
                      +.......++.|+.+|+++|+++++  |+||+|+|+|+++++.++. +  ++|| .|+ +..+|++.  .+..+ +..|+
T Consensus        58 ~~~~~~~~~~l~~~la~~~~~~~~~--v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~  134 (400)
T 3vax_A           58 GIRAKRGVERAREYLASTVSAEPDE--LIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGF  134 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCGGG--EEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCc--EEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCC
Confidence            4445566789999999999997654  9999999999999999873 1  5788 886 55566632  33333 45699


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      ++..+|.+. ++.+|.++|++.++++     +++|.++..  .+|.+.|+++|.+ |+++|+++++|++|+. |..++++
T Consensus       135 ~~~~v~~~~-~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~-~~~~~~~  207 (400)
T 3vax_A          135 EVDFLTPGP-SGRISVEGVMERLRPD-----TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGY-GKVPGDL  207 (400)
T ss_dssp             EEEEECCCT-TCCCCHHHHHTTCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTT-TTSGGGG
T ss_pred             eEEEEccCC-CCCcCHHHHHHhcCCC-----ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhc-CCCCcCh
Confidence            999999986 7889999999998764     577777654  5999999999966 6999999999999999 9999999


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEE-EeC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLL-VRR  300 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~-vr~  300 (311)
                      ... +|++++|+|| ++| |.|+|+++ +++
T Consensus       208 ~~~-~d~~~~s~~K-~~g-~~g~g~~~~~~~  235 (400)
T 3vax_A          208 TTP-IDMISISGHK-IGA-PKGVGALVTRRR  235 (400)
T ss_dssp             GSC-CSEEEEETGG-GTS-CSSCEEEEECBC
T ss_pred             hhc-CcEEEEeHHH-hCC-CCceEEEEEecc
Confidence            888 9999999999 998 88999999 987

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.84  E-value=1e-19  Score=169.97  Aligned_cols=172  Identities=13%  Similarity=0.111  Sum_probs=139.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....+++++.+++++|++ +.+.|+||+|+|+|+++++.++ +++|+.|+ ....|++..+...++..|+++..+|.+. 
T Consensus        52 ~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-  128 (386)
T 2dr1_A           52 RKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNG-VSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP-  128 (386)
T ss_dssp             HHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHH-SCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT-
T ss_pred             HHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHh-hcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCC-
Confidence            456679999999999996 2345999999999999999987 56889886 4455654334555667799999999875 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLC  280 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~  280 (311)
                      ++.++.++|++.+++..   ++++|.+++.  .+|.+.|+++|.+ |+++|+++++|++|+. |..++++...++|++++
T Consensus       129 ~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~di~~~  204 (386)
T 2dr1_A          129 GKAVKPEDLDDALRKNP---DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAM-GGADIKFDKWGLDVVFS  204 (386)
T ss_dssp             TCCCCHHHHHHHHHHCT---TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTB-TTBCCCTTTTTCSEEEE
T ss_pred             CCCCCHHHHHHHHhcCC---CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccc-cCccccccccCCcEEEE
Confidence            67799999999995311   2466666543  5999999999966 7999999999999999 98888888889999999


Q ss_pred             ccccCcCCCCCceEEEEEeCCCCc
Q 021539          281 TLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |+|| ++|+|.|+|+++++++..+
T Consensus       205 s~sK-~~~~~~g~G~~~~~~~~~~  227 (386)
T 2dr1_A          205 SSQK-AFGVPPGLAIGAFSERFLE  227 (386)
T ss_dssp             ETTS-TTCCCSSCEEEEECHHHHH
T ss_pred             eccc-cccCCCceEEEEECHHHHH
Confidence            9999 6665879999999876543

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.84  E-value=2e-20  Score=174.70  Aligned_cols=187  Identities=13%  Similarity=0.049  Sum_probs=146.5

Q ss_pred             chhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHH
Q 021539          106 PSRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDY  183 (311)
Q Consensus       106 ~~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~  183 (311)
                      +.++.+.+.+.. ...........++.|+.+++++|+++ +..|+||+|+|+|+.+++.++ +++||.|+. ...|+...
T Consensus        35 ~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~~al~~~~~~~-~~~gd~vl~~~~~~~~~~  112 (393)
T 3kgw_A           35 APRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRN-PLTLVVSGSGHCAMETALFNL-LEPGDSFLTGTNGIWGMR  112 (393)
T ss_dssp             CHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCC-SEEEEESCCTTTHHHHHHHHH-CCTTCEEEEEESSHHHHH
T ss_pred             CHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCC-CcEEEEeCCcHHHHHHHHHhc-CCCCCEEEEEeCCchhHH
Confidence            445666665432 22222234556789999999999964 335999999999999999988 678999864 34444334


Q ss_pred             HHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEeccc
Q 021539          184 IKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDAT  259 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAa  259 (311)
                      +...++..|.++..+|.+. ++.+|.++|++.+++ +     +++|.+.+.  .+|.+.|+++|.+ |+++|+++++|++
T Consensus       113 ~~~~~~~~g~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~  186 (393)
T 3kgw_A          113 AAEIADRIGARVHQMIKKP-GEHYTLQEVEEGLAQHK-----PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSV  186 (393)
T ss_dssp             HHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred             HHHHHHHcCCceEEEeCCC-CCCCCHHHHHHHHhhCC-----CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECC
Confidence            4555667799999999876 668999999999987 4     456665543  6999999999966 7999999999999


Q ss_pred             ccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          260 GLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       260 Qsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |+. |..++++...++|++++|+|||++| |.|+|+++++++.
T Consensus       187 ~~~-g~~~~~~~~~~~d~~~~s~sK~~~~-~~g~g~~~~~~~~  227 (393)
T 3kgw_A          187 ASL-GGVPIYMDQQGIDIMYSSSQKVLNA-PPGISLISFNDKA  227 (393)
T ss_dssp             TTT-TTSCCCTTTTTCCEEEEESSSTTCC-CSSCEEEEECHHH
T ss_pred             ccc-cCcccchhhcCCCEEEecCcccccC-CCceeEEEECHHH
Confidence            999 9999999888999999999995556 8899999998764

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.84  E-value=6.2e-20  Score=174.39  Aligned_cols=173  Identities=21%  Similarity=0.149  Sum_probs=141.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcCh--HHHHHHHHhCCcE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEES--DYIKGFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~  194 (311)
                      +......++++|+.+++++|+++++  |+||+|+|+|+++++.++.   ..+|+.|+ ...+|++  ..+..+ +..|++
T Consensus        63 ~~~~~~~~~~l~~~la~~~~~~~~~--v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~  139 (423)
T 3lvm_A           63 GWQAEEAVDIARNQIADLVGADPRE--IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFE  139 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCE
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCCCe--EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCE
Confidence            3444556789999999999997654  9999999999999888663   13688886 4456653  233333 566999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      +..+|.+. ++.+|.++|++.++++     +++|.++..  .+|.+.|+++|.+ |+++|+++++|++|+. |..++++.
T Consensus       140 ~~~v~~~~-~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~-~~~~~~~~  212 (423)
T 3lvm_A          140 VTYLAPQR-NGIIDLKELEAAMRDD-----TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSV-GKLPIDLS  212 (423)
T ss_dssp             EEEECCCT-TSCCCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTT-TTSCCCTT
T ss_pred             EEEeccCC-CCccCHHHHHHhcCCC-----cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhc-CCCCcChh
Confidence            99999986 7888999999999764     567776543  6999999999966 6999999999999999 99999998


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ..++|++++|+|| ++| |.|+|+++++++..+.
T Consensus       213 ~~~~di~~~s~sK-~~g-~~g~G~~~~~~~~~~~  244 (423)
T 3lvm_A          213 QLKVDLMSFSGHK-IYG-PKGIGALYVRRKPRVR  244 (423)
T ss_dssp             TSCCSEEEEESTT-TTS-CSSCEEEEECBTTBCC
T ss_pred             hcCCCEEEechHH-hcC-CCCeEEEEEeccccCC
Confidence            8999999999999 898 8899999999876554

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.83  E-value=2.7e-20  Score=178.02  Aligned_cols=171  Identities=16%  Similarity=0.166  Sum_probs=136.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--C-----CCCC-------------EEE-EccCc
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--F-----FKGN-------------YYL-TIISE  179 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~-----~~Gd-------------~Il-s~~eh  179 (311)
                      +......+++.|+.+|+++|+++++  |+||+|+|+|+++++.++.  +     ++|+             .|+ +..+|
T Consensus        56 ~~~~~~~~~~l~~~la~~~g~~~~~--v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h  133 (432)
T 3a9z_A           56 GRKAKDIINTARASLAKMIGGKPQD--IIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEH  133 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGG--EEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcCe--EEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcc
Confidence            4445566789999999999997654  9999999999998887752  0     2453             443 56666


Q ss_pred             ChH--HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC---
Q 021539          180 ESD--YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA---  251 (311)
Q Consensus       180 ~~~--~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g---  251 (311)
                      ++.  .+..+++..|+++..+|.+..++.++.++|++.++++     +++|.+++.  .||.++|+++|.+ |+++|   
T Consensus       134 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~  208 (432)
T 3a9z_A          134 DSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT-----TCLVTIMLANNETGVIMPISEISRRIKALNQIR  208 (432)
T ss_dssp             HHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC-----ceEEEEECcccCcccccCHHHHHHHHHhcCccc
Confidence            643  3455566679999999987546788999999988754     578877654  5899999999966 68888   


Q ss_pred             -------cEEEecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          252 -------WHVLLDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       252 -------~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                             +++++|++|+. |..++++...++|++++|+|| ++| |. +|+++++++.
T Consensus       209 ~~~~~~~~~livDea~~~-~~~~~~~~~~~~d~~~~s~~K-~~g-~~-~G~~~~~~~~  262 (432)
T 3a9z_A          209 AASGLPRVLVHTDAAQAL-GKRRVDVEDLGVDFLTIVGHK-FYG-PR-IGALYVRGVG  262 (432)
T ss_dssp             HHHTCCCCEEEEECTTTT-TTSCCCHHHHCCSEEEEEGGG-TTC-CS-CEEEEETTBT
T ss_pred             ccccCCceEEEEEchhhh-CCcccChhhcCCCEEEEehhH-hcC-Cc-ceEEEEcccc
Confidence                   99999999999 998888877789999999999 888 86 9999999865

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.83  E-value=6.5e-20  Score=169.44  Aligned_cols=168  Identities=12%  Similarity=0.117  Sum_probs=133.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ........+++|+.+++++|++ +.++|+||+|+|+|+++++.++. .+ +.++...+|+...+...++..|+++..++.
T Consensus        38 ~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l~-~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~  114 (362)
T 3ffr_A           38 SKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNCV-EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEA  114 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHHC-SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhcc-CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEec
Confidence            3444466789999999999996 33469999999999999999875 34 445555565554455556677999999998


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC-CcEEEecccccCccCcccCCCCCCCc
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN-AWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~-g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      +. ++.+|.++|+  ++++     +++|.+.+.  .+|.++|+++|.+ |+++ |+++++|++|+. |..++++..  +|
T Consensus       115 ~~-~~~~d~~~l~--~~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~-~~~~~~~~~--~d  183 (362)
T 3ffr_A          115 AF-GKGFYPADIT--VPAD-----AEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSL-PYPKFDWTK--ID  183 (362)
T ss_dssp             CT-TCCCCGGGCC--CCTT-----CCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTT-TSSCCCTTS--CS
T ss_pred             CC-CCCCCHHHHh--ccCC-----ccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEeccccc-CCcccChhH--Cc
Confidence            75 5678888887  4433     567766654  6999999999976 6999 999999999999 999988875  99


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++++|+|| ++|+|.|+|+++++++..
T Consensus       184 ~~~~s~~K-~~~~~~G~g~~~~~~~~~  209 (362)
T 3ffr_A          184 SVFFSVQK-CFGLPAGLGVWILNDRVI  209 (362)
T ss_dssp             EEEEETTS-TTCCCSCCEEEEEEHHHH
T ss_pred             EEEEeccc-ccCCCCceEEEEECHHHH
Confidence            99999999 666588999999987653

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.83  E-value=2.8e-20  Score=181.97  Aligned_cols=262  Identities=11%  Similarity=0.015  Sum_probs=163.6

Q ss_pred             cccccchhHHHHHHhhhhccCcc-------ccCCCCCchhhHHHHHHHhhccCccCCcccCCCCCCcccccccccccccc
Q 021539            6 AHTLIPAHIVAEAISTLRGLGLR-------WSGPITPTEMQYVEQYVFAKYPQYYNGIVEPEDTHDLENLCVDEESTETG   78 (311)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (311)
                      +..+||.|.|-.+-..++..+.-       ..=|-.....+=++++ .+++|.+....|.|+++++     .........
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~g~~~~~i~~~-~~~~~~~~~~~yld~aa~~-----~~~~~v~~a   99 (456)
T 2z67_A           26 IEGLIPKNMEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLF-LKFLSMMDTDKDPKSVRIG-----EREARTYSK   99 (456)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHTHHHHHHHHHCSCCSSCCCHHHHHHH-HHHHHTTBGGGCTTCEECS-----SCCCCCSCH
T ss_pred             hhccCcHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH-HHHHHhccccccccccccc-----ccccccccc
Confidence            45789999998775544433221       1112111111225553 4677888777899988777     333322211


Q ss_pred             chhhhhcCCCCCCCCCCCCccccccccchhHHHHh-cCCCCcchh-hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH
Q 021539           79 IDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDIL-SKKTSFKGN-FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKE  156 (311)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~ss~~G~-~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTe  156 (311)
                      .... +---+.++.+              +..+++ .|+ .+.+. .+...++++|+.+|+++|+++ +  ++||+|+||
T Consensus       100 ~~~~-~~~~~~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~-~--~~~t~g~te  160 (456)
T 2z67_A          100 IHEE-LSSGFCHGIG--------------RSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV-H--AIATPISTG  160 (456)
T ss_dssp             HHHH-HTTTCTTCBS--------------BTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC-E--EEEESSCHH
T ss_pred             ccCc-cccccCCCcc--------------HHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC-C--EEEeCcHHH
Confidence            1111 0001121111              011111 122 22332 355667899999999999974 3  999999997


Q ss_pred             HHHH-HHhcC-CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC---CCCCcccCHHHHHhhh-hc--cCCCCCceE
Q 021539          157 AMLM-IGESY-PFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE---TWLDLRIKGSQLSQNF-RR--KCKYTPKGL  227 (311)
Q Consensus       157 alnl-v~~s~-~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~---~~~~g~id~~~L~~~l-~~--~~~~~~t~L  227 (311)
                      +.|+ ++.++ .+.+|+.|+ +..+|.+ .+ ..++..|+++..++.   +. ++.+|.++|++++ +.  +.   ++.+
T Consensus       161 ~a~~~al~~~~~~~~~~~vi~~~~~h~s-~~-~~~~~~G~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~~~---~~~~  234 (456)
T 2z67_A          161 MSISLCLSAARKKYGSNVVIYPYASHKS-PI-KAVSFVGMNMRLVETVLDGD-RVYVPVEDIENAIKKEIELG---NRPC  234 (456)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEECCCCHH-HH-HHHHHTTCEEEEECCEEETT-EEECCHHHHHHHHHHHHHTT---CCEE
T ss_pred             HHHHHHHHHHHHhcCCCEEEEECCCcHH-HH-HHHHHcCCCceEEEEeccCC-CCCcCHHHHHHHHHHHhhCC---CeEE
Confidence            5443 33332 112456665 6666654 33 345567999998886   43 6789999999999 42  11   2455


Q ss_pred             EEEecc--cccchhcHHHHHH-HHHCCcEEEec---ccccCccCcccCCCCC--CCcEEEEccccCcCCCCCceEEEEEe
Q 021539          228 FSYPVV--VNGTRYSMHWISE-AHRNAWHVLLD---ATGLVFGEDQLALALH--RPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       228 Vs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvD---AaQsv~G~~pldl~~l--~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      |+++..  .+|.+.|+++|.+ |+++|+++|+|   +.|++ |..++++..+  ++||+++|+|||++| |.|+|+|++|
T Consensus       235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~~~D~~~~s~hK~~~~-p~g~G~l~~~  312 (456)
T 2z67_A          235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN-YYLEKLKKAFKYRVDAVVSSSDKNLLT-PIGGGLVYST  312 (456)
T ss_dssp             EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH-HHHHHHHHHHTSCCSEEEEEHHHHHCC-CSSCEEEEES
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHH-HhhHHHHHhhCCCCCEEEEcCCCCcCC-CCCeEEEEEc
Confidence            544432  6999999999976 69999999999   56667 7777776544  899999999994445 9999999996


Q ss_pred             C
Q 021539          300 R  300 (311)
Q Consensus       300 ~  300 (311)
                      +
T Consensus       313 ~  313 (456)
T 2z67_A          313 D  313 (456)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.81  E-value=2e-19  Score=178.47  Aligned_cols=173  Identities=16%  Similarity=0.001  Sum_probs=130.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC------CC-CCC------EEE-EccCcChHHHHHH
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP------FF-KGN------YYL-TIISEESDYIKGF  187 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~------~~-~Gd------~Il-s~~eh~~~~~~~l  187 (311)
                      ......++++|+.+++++|++++  .++||+|+|+|+.+++....      ++ +|+      .|+ +..+|.+.  ...
T Consensus       144 ~~~~~le~~~~~~la~l~g~~~~--~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~--~~~  219 (515)
T 2jis_A          144 PVFVLMEEEVLRKLRALVGWSSG--DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI--QKG  219 (515)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH--HHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCC--CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH--HHH
Confidence            34455567899999999999743  59999999999877655431      11 353      554 55566642  222


Q ss_pred             HHhCCc---EEEEEeCCCCCcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccc
Q 021539          188 AAQKES---KVIAAPETWLDLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       188 a~~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      ++..|.   +++.+|.+. ++.++.++|++.+++... ...+.+|++++.  .+|.+.|+++|.+ |+++|+++|+|++|
T Consensus       220 ~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~  298 (515)
T 2jis_A          220 AAFLGLGTDSVRVVKADE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAW  298 (515)
T ss_dssp             HHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred             HHHcCCCCCcEEEEecCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhh
Confidence            333455   899999875 789999999999975210 012567777654  6999999999976 69999999999999


Q ss_pred             cCccCcccC-----CCCC-CCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          261 LVFGEDQLA-----LALH-RPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       261 sv~G~~pld-----l~~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +. +..+.+     +... ++|++++|+|| |+|+|.|+|++++|++
T Consensus       299 ~~-~~~~~~~~~~~~~g~~~aD~v~~s~hK-~l~~p~g~G~l~~~~~  343 (515)
T 2jis_A          299 GG-SVLLSQTHRHLLDGIQRADSVAWNPHK-LLAAGLQCSALLLQDT  343 (515)
T ss_dssp             GG-GGGGCTTTGGGGTTGGGCSEEEECTTS-TTCCCSCCEEEEESCC
T ss_pred             hh-HHHhChhhHhhcCCCccCCEEEECccc-ccCCCCCeeEEEEeCh
Confidence            99 888776     5544 79999999999 5555999999999987

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.81  E-value=1e-19  Score=170.16  Aligned_cols=165  Identities=12%  Similarity=0.074  Sum_probs=123.1

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ......+++|+.+++++|++++...|+||+|+|+|+++++.++ +.+||+|+. ..++....+...++..| +++.+|.+
T Consensus        46 ~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~  123 (362)
T 2c0r_A           46 VYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNF-LKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASS  123 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhc-CCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecc
Confidence            3445678999999999999643123578899999999999987 478999853 34444433334455568 99998875


Q ss_pred             C--CCc-ccCHHHHHhhhhccCCCCCceEEEEecc--cccch-hcHHHHHHHHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          202 W--LDL-RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR-YSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       202 ~--~~g-~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i-~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      .  ..+ .++.++++  ++++     +++|++++.  .||.+ .|+++|     +|+++++|++|+. |..++++.+.  
T Consensus       124 ~~~~~~~~~~~~~~~--i~~~-----t~~v~~~~~~n~tG~~~~~l~~i-----~~~~vivD~a~~~-~~~~~~~~~~--  188 (362)
T 2c0r_A          124 EASNYMTLPKLQEIQ--LQDN-----AAYLHLTSNETIEGAQFKAFPDT-----GSVPLIGDMSSDI-LSRPFDLNQF--  188 (362)
T ss_dssp             GGGTTCSCCCGGGCC--CCTT-----EEEEEEESEETTTTEECSSCCCC-----TTSCEEEECTTTT-TSSCCCGGGC--
T ss_pred             cccccccCCCHHHcc--cCCC-----cCEEEEeCCcCccceeccccccc-----CCCEEEEEChhhc-cCCccchhHC--
Confidence            2  122 34555443  4432     678887655  69995 777776     8999999999999 9999988754  


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      |++++|+|| +|| |.|+|+++++++..+..
T Consensus       189 d~~~~s~~K-~~g-~~G~G~l~~~~~~~~~l  217 (362)
T 2c0r_A          189 GLVYAGAQK-NLG-PSGVTVVIVREDLVAES  217 (362)
T ss_dssp             SEEEEETTT-TTC-CSSCEEEEEEGGGSSSC
T ss_pred             cEEEEeccc-ccc-CcCcEEEEEcHHHHhhc
Confidence            999999999 888 99999999999876543

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.80  E-value=7e-19  Score=163.69  Aligned_cols=170  Identities=14%  Similarity=0.081  Sum_probs=135.2

Q ss_pred             HHHHHHHHH-HHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe--CC
Q 021539          126 IPEIQARNR-ALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAP--ET  201 (311)
Q Consensus       126 ~~le~aR~~-IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp--~~  201 (311)
                      ...++.|+. +++++|++    .|+||+|+|+|+++++.++ +.+|+.|+ ....|+...  ..++..|+++..+|  .+
T Consensus        53 ~~~~~l~~~~la~~~~~~----~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~  125 (371)
T 2e7j_A           53 PPIHDFIHNQLPKFLGCD----VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSY--VAAERAGLNIALVPKTDY  125 (371)
T ss_dssp             CCHHHHHHTHHHHHTTSS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHH--HHHHHTTCEEEEECCCCT
T ss_pred             HHHHHHHHHHHHHHcCCC----EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHH--HHHHHcCCeEEEeecccC
Confidence            345689999 99999985    5999999999999999987 57889886 445555322  22456799999999  76


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEE
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                      . ++.++.++|++.+++...+.++++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+. |..++++..+++|++
T Consensus       126 ~-~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~di~  203 (371)
T 2e7j_A          126 P-DYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAI-GRMPVSLKEIGADFI  203 (371)
T ss_dssp             T-TCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTB-TTBCCCHHHHTCSEE
T ss_pred             C-CCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECcccc-CCCCCChhhcCCCEE
Confidence            5 577899999999973210012567776654  5999999999966 6999999999999999 988888877789999


Q ss_pred             EEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          279 LCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       279 ~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++|+|| ++++|.|+|+++++++..+.
T Consensus       204 ~~s~sK-~~~~~~~~G~~~~~~~~~~~  229 (371)
T 2e7j_A          204 VGSGHK-SMAASGPIGVMGMKEEWAEI  229 (371)
T ss_dssp             EEEHHH-HSSCCSSCEEEEECTTTTTT
T ss_pred             EecCCc-CCCCCCCcEEEEEechhhhh
Confidence            999999 55447899999999987654

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.79  E-value=3.1e-18  Score=168.85  Aligned_cols=172  Identities=13%  Similarity=-0.024  Sum_probs=124.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC----C-----C---CC------CC-EEE-EccCcChHHH
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY----P-----F---FK------GN-YYL-TIISEESDYI  184 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~----~-----~---~~------Gd-~Il-s~~eh~~~~~  184 (311)
                      ....+++|+.+++++|+++ ...++||+|+|+|+++++.+.    .     +   .+      |+ .|+ +..+|.+.  
T Consensus       139 ~~le~~~~~~la~~~g~~~-~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~--  215 (497)
T 2qma_A          139 TYVEQKVVNWLCDKYDLSE-KADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTV--  215 (497)
T ss_dssp             HHHHHHHHHHHHHHTTCCT-TCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHH--
T ss_pred             HHHHHHHHHHHHHHhCCCC-CCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHH--
Confidence            3334567999999999974 236999999999998876652    0     1   01      45 555 55566642  


Q ss_pred             HHHHHhCCc---EEEEEeCCCCCcccCHHHHHhhhhccCCCCC-ceEEEEecc--cccchhcHHHHHH-HHHCCcEEEec
Q 021539          185 KGFAAQKES---KVIAAPETWLDLRIKGSQLSQNFRRKCKYTP-KGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       185 ~~la~~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~-t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                      ...++..|.   +++.+|.+. ++++|.++|++.++++..... +.+|++++.  .+|.+.|+++|.+ |+++|+++|+|
T Consensus       216 ~~~~~~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD  294 (497)
T 2qma_A          216 QKSASWMGLGEKAVMTVDANA-DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVD  294 (497)
T ss_dssp             HHHHHHTTSCGGGEEEECBCT-TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHcCCCcccEEEEecCC-CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEe
Confidence            222333344   789999875 789999999999875311001 225555543  6899999999976 69999999999


Q ss_pred             ccccCccCcccC----CCCC-CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          258 ATGLVFGEDQLA----LALH-RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       258 AaQsv~G~~pld----l~~l-~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|+. +..+.+    +..+ ++|++++|+|||+++ |.|+|+++++++.
T Consensus       295 ~a~~~-~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~~~  342 (497)
T 2qma_A          295 GAYGG-ALILSSHKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVNDKS  342 (497)
T ss_dssp             ETTGG-GGGGSTTGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESCGG
T ss_pred             hhhhH-HHHhCcchHhhcCcccCCEEEEcchhccCC-CcceEEEEEeCHH
Confidence            99999 887776    3334 789999999995555 9999999998754

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.79  E-value=1.1e-18  Score=172.25  Aligned_cols=173  Identities=16%  Similarity=0.033  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCC-----C-EEE-EccCcChHHHHHHHH
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKG-----N-YYL-TIISEESDYIKGFAA  189 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~G-----d-~Il-s~~eh~~~~~~~la~  189 (311)
                      .....+++++.+++++|++.+...++||+|+|+|+++++.++..       ++|     + .|+ +..+|.+.  ...++
T Consensus       130 ~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~--~~~~~  207 (504)
T 2okj_A          130 FVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI--KKAGA  207 (504)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH--HHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH--HHHHH
Confidence            33444577899999999973234699999999999987766421       135     5 454 55666642  22233


Q ss_pred             hCCc---EEEEEeCCCCCcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539          190 QKES---KVIAAPETWLDLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       190 ~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                      ..|.   +++.+|.+. +++++.++|++.+++... ...+.+|++++.  .+|.+.|+++|.+ |+++|+++|||++|+.
T Consensus       208 ~~g~g~~~v~~v~~~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~  286 (504)
T 2okj_A          208 ALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGG  286 (504)
T ss_dssp             HTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGG
T ss_pred             HcCCCcccEEEEecCC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhh
Confidence            3344   899999875 789999999999975210 012567777654  5899999999976 6999999999999998


Q ss_pred             ccCcc-----cCCCC-CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          263 FGEDQ-----LALAL-HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       263 ~G~~p-----ldl~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                       +...     .++.. .++|++++++|| |+|.|.|+|++++|++
T Consensus       287 -~~~~~~~~~~~~~g~~~~D~i~~~~hK-~~~~p~~~g~l~~~~~  329 (504)
T 2okj_A          287 -GLLMSRKHRHKLNGIERANSVTWNPHK-MMGVLLQCSAILVKEK  329 (504)
T ss_dssp             -GGGGCTTTGGGGTTGGGCSEEEECTTS-TTCCCSCCEEEEESST
T ss_pred             -HHHhCHhhHhhcCCcccCCEEEECchh-hcCCCcceEEEEEECH
Confidence             7654     34443 379999999999 6666999999999975

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.78  E-value=9.5e-19  Score=165.87  Aligned_cols=163  Identities=12%  Similarity=0.066  Sum_probs=126.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC----CCCCE-EE-EccCcChH--HHHHHHHhC--CcE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF----FKGNY-YL-TIISEESD--YIKGFAAQK--ESK  194 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~----~~Gd~-Il-s~~eh~~~--~~~~la~~~--G~~  194 (311)
                      ...+++|+.+++++|+++++  |+||+|+|+++.+++.++ .+    .+|+. |+ +..+|.+.  .+..+++..  |++
T Consensus        71 ~~~~~l~~~la~~~g~~~~~--v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~  148 (416)
T 1qz9_A           71 DLSERLGNRLATLIGARDGE--VVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYT  148 (416)
T ss_dssp             GHHHHHHHHHHTTTTCCTTS--EEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCE
T ss_pred             HHHHHHHHHHHHHcCCCccc--EEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCce
Confidence            45678999999999997654  999999999998777764 34    67876 44 34455532  333444444  889


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      +..+|.        .++|++.++++     +++|.+++.  .+|.++|+++|.+ |+++|+++++|++|+. |..++++.
T Consensus       149 ~~~v~~--------~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~-g~~~~~~~  214 (416)
T 1qz9_A          149 LRLVDS--------PEELPQAIDQD-----TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSA-GAVPVDLH  214 (416)
T ss_dssp             EEEESS--------GGGHHHHCSTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTT-TTSCCCHH
T ss_pred             EEEeCc--------HHHHHHHhCCC-----ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccc-cCcCCChh
Confidence            888876        45677777653     567777654  5899999999966 6999999999999999 99988887


Q ss_pred             CCCCcEEEEccccCcCCCCCce-EEEEEeCCCCcc
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKI-TCLLVRRKSFDT  305 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~Gi-G~L~vr~~~~~~  305 (311)
                      .+++|++++|+|||++| +.|+ |+++++++..+.
T Consensus       215 ~~~~d~~~~s~~K~l~~-g~~~~g~l~~~~~~~~~  248 (416)
T 1qz9_A          215 QAGADYAIGCTYKYLNG-GPGSQAFVWVSPQLCDL  248 (416)
T ss_dssp             HHTCSEEEECSSSTTCC-CTTCCCEEEECTTTTTT
T ss_pred             hcCCCEEEecCcccCCC-CCCCeEEEEECHHHHhc
Confidence            77899999999995555 4576 999999987654

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.77  E-value=7e-18  Score=157.13  Aligned_cols=156  Identities=11%  Similarity=0.054  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--FFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ..++.|+.+|+++|++    .|+||+|+|+|+++++.++.  +++|++|+ ...+|+.. . ..++..|+++..++.+. 
T Consensus        33 ~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~-~-~~~~~~g~~~~~~~~~~-  105 (375)
T 2fnu_A           33 RSLLFEEALCEFLGVK----HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVAT-A-NMLLESGYTPVFAGIKN-  105 (375)
T ss_dssp             HHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHH-H-HHHHHTTCEEEECCBCT-
T ss_pred             HHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhH-H-HHHHHCCCEEEEeccCC-
Confidence            4568999999999985    49999999999999999986  67899886 44556532 2 22345699999999875 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccC--CCCC-CCcEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA--LALH-RPDLVL  279 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld--l~~l-~~Dfl~  279 (311)
                      ++.+|.++|++.++++     +++|.+.+. +|.+.|+++|.+ |+++|+++++|++|+. |..+.+  +... ++++.+
T Consensus       106 ~~~~d~~~l~~~i~~~-----~~~v~~~~~-tG~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~i~~~s  178 (375)
T 2fnu_A          106 DGNIDELALEKLINER-----TKAIVSVDY-AGKSVEVESVQKLCKKHSLSFLSDSSHAL-GSEYQNKKVGGFALASVFS  178 (375)
T ss_dssp             TSSBCGGGSGGGCCTT-----EEEEEEECG-GGCCCCHHHHHHHHHHHTCEEEEECTTCT-TCEETTEETTSSSSEEEEE
T ss_pred             CCCCCHHHHHhhcCcC-----ceEEEEeCC-cCCccCHHHHHHHHHHcCCEEEEECcccc-CCeECCeeccccCCeEEEe
Confidence            5678999998888754     566655544 999999999966 6999999999999999 876644  4433 356667


Q ss_pred             EccccCcCCCCCceEEEEEe
Q 021539          280 CTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       280 ~S~HK~l~G~P~GiG~L~vr  299 (311)
                      +|+|| ++| | |+|+++++
T Consensus       179 ~s~~K-~~~-~-g~g~~~~~  195 (375)
T 2fnu_A          179 FHAIK-PIT-T-AEGGAVVT  195 (375)
T ss_dssp             CCTTS-SSC-C-SSCEEEEE
T ss_pred             CCCCC-Ccc-c-cCceEEEe
Confidence            77789 888 8 99999995

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.77  E-value=8.1e-18  Score=156.61  Aligned_cols=166  Identities=15%  Similarity=-0.012  Sum_probs=129.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC------------CCCCEEE-EccCcChHHHHHHHHh
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF------------FKGNYYL-TIISEESDYIKGFAAQ  190 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~------------~~Gd~Il-s~~eh~~~~~~~la~~  190 (311)
                      .....+++|+.+++++|++++  +|+||+|+|+|+.+++..+..            .+|+.|+ ....|+.  +...++.
T Consensus        67 ~~~~~~~l~~~la~~~~~~~~--~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~--~~~~~~~  142 (397)
T 3f9t_A           67 TKLLEEKAVALLGSLLNNKDA--YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFS--FEKGREM  142 (397)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTC--EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTH--HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCC--CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhH--HHHHHHH
Confidence            345567899999999999765  499999999999988776532            2478886 4555653  2233344


Q ss_pred             CCcEEEEEeCCCCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc
Q 021539          191 KESKVIAAPETWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED  266 (311)
Q Consensus       191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~  266 (311)
                      .|+++..+|.+. ++.+|.++|++.+++ +     +++|.+...  .+|.+.|+++|.+ |+++|+++++|++|+. +..
T Consensus       143 ~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~-~~~  215 (397)
T 3f9t_A          143 MDLEYIYAPIKE-DYTIDEKFVKDAVEDYD-----VDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGG-LVI  215 (397)
T ss_dssp             HTCEEEEECBCT-TSSBCHHHHHHHHHHSC-----CCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGG-GTG
T ss_pred             cCceeEEEeeCC-CCcCCHHHHHHHHhhcC-----CeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccc-hhh
Confidence            599999999886 688999999999987 4     345554433  6999999999966 6999999999999985 433


Q ss_pred             --------------ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          267 --------------QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       267 --------------pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                                    ++++.. ++|++++|+|| ++++|.++|+++++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K-~~~~~~~~g~~~~~~~~  263 (397)
T 3f9t_A          216 PFLDDKYKKKGVNYKFDFSL-GVDSITIDPHK-MGHCPIPSGGILFKDIG  263 (397)
T ss_dssp             GGCCGGGCCTTCCCCCSGGG-TCSEEECCTTT-TTCCCSSCEEEEESSGG
T ss_pred             hhcccccccccccccccccc-cCCeEEEcccc-ccCCCCCceEEEEeCHH
Confidence                          667766 89999999999 66448899999998764

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.77  E-value=5.2e-18  Score=164.90  Aligned_cols=170  Identities=11%  Similarity=-0.025  Sum_probs=128.3

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCC---CeEEEeCCHHHHHHHHHhcCCC-------CCC-----CEEEEccCcChHHHHHH
Q 021539          123 FISIPEIQARNRALKHCGLSEDE---YLVLFVPNYKEAMLMIGESYPF-------FKG-----NYYLTIISEESDYIKGF  187 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~de---y~VvFTsnaTealnlv~~s~~~-------~~G-----d~Ils~~eh~~~~~~~l  187 (311)
                      ......+++++.+++++|+++++   ..++||+|+|||+++++.++..       .+|     +.|+....|.  .+...
T Consensus        78 ~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~~h~--~~~~~  155 (452)
T 2dgk_A           78 QSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQI--CWHKF  155 (452)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESSCCH--HHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECCCcH--HHHHH
Confidence            34455679999999999997542   2599999999999987665421       023     4666443432  24445


Q ss_pred             HHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH------CCcEEEecc
Q 021539          188 AAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR------NAWHVLLDA  258 (311)
Q Consensus       188 a~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~------~g~~vlvDA  258 (311)
                      ++..|++++.+|.+..++.+|+++|+++++++     +++|++++.  .+|.+.|+++|.+ |++      +|+++|||+
T Consensus       156 ~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~-----t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~  230 (452)
T 2dgk_A          156 ARYWDVELREIPMRPGQLFMDPKRMIEACDEN-----TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDA  230 (452)
T ss_dssp             HHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT-----EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             HHHcCceEEEEecCCCCCeECHHHHHHHHhhC-----CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEc
Confidence            56679999999987535789999999999764     567766543  6999999999976 677      499999999


Q ss_pred             cccCccCc-------ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          259 TGLVFGED-------QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       259 aQsv~G~~-------pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +++. +..       +.+++..++|++++|+|||+++ |.|+|++++|++
T Consensus       231 a~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~-~~~~G~~~~~~~  278 (452)
T 2dgk_A          231 ASGG-FLAPFVAPDIVWDFRLPRVKSISASGHKFGLA-PLGCGWVIWRDE  278 (452)
T ss_dssp             TTGG-GTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSG
T ss_pred             ccHH-HHHHhhCccchhhcCCCCCcEEEECcccccCC-CCCeEEEEEcCH
Confidence            9987 543       3566556899999999995445 899999999864

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.76  E-value=1.9e-17  Score=159.23  Aligned_cols=179  Identities=7%  Similarity=-0.061  Sum_probs=132.4

Q ss_pred             cchhHHHHhcCCCCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH
Q 021539          105 EPSRLLDILSKKTSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD  182 (311)
Q Consensus       105 ~~~~l~~~l~~~ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~  182 (311)
                      .+..+.+++.....| .++......++.|+.+|+++|++    +++||+|+|+|+++++.++ +.+|++|+ +..+|+..
T Consensus        34 ~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~al~~l-~~~gd~vi~~~~~~~~~  108 (412)
T 2cb1_A           34 TLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGAL----EAVVLASGQAATFAALLAL-LRPGDEVVAAKGLFGQT  108 (412)
T ss_dssp             SHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEETTCCHHH
T ss_pred             ChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCchhH
Confidence            334445544322222 24555566789999999999984    3999999999999999987 67899886 55566532


Q ss_pred             --HHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEec
Q 021539          183 --YIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       183 --~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                        .+..+++..|+++..++.+       .++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|
T Consensus       109 ~~~~~~~~~~~g~~~~~~~~~-------~~~l~~~i~~~-----~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D  176 (412)
T 2cb1_A          109 IGLFGQVLSLMGVTVRYVDPE-------PEAVREALSAK-----TRAVFVETVANPALLVPDLEALATLAEEAGVALVVD  176 (412)
T ss_dssp             HHHHHHTTTTTTCEEEEECSS-------HHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHHHHcCCEEEEECCC-------HHHHHHHhccC-----CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence              2333345569999888763       67888888764     577777544  5999999999966 69999999999


Q ss_pred             ccccCccCcccCCCCCCCcEEEEccccCcCCCCCc-eEEEEEeCCC
Q 021539          258 ATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLK-ITCLLVRRKS  302 (311)
Q Consensus       258 AaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~G-iG~L~vr~~~  302 (311)
                      ++|+. +....+....++|++++|+|| ++|+|.+ +|++++.++.
T Consensus       177 ~~~~~-~~~~~~~~~~~~di~~~S~~K-~~~~~~~~~G~~~~~~~~  220 (412)
T 2cb1_A          177 NTFGA-AGALCRPLAWGAHVVVESLTK-WASGHGSVLGGAVLSRET  220 (412)
T ss_dssp             CGGGT-TTTSCCGGGGTCSEEEEETTT-TTTCSSCCCCEEEEECCC
T ss_pred             CCCcc-ccccCCccccCCeEEEECCcc-cccCCCCcEEEEEEeccc
Confidence            99998 733333334689999999999 6655876 8999988743

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.76  E-value=1.5e-17  Score=162.98  Aligned_cols=175  Identities=12%  Similarity=-0.034  Sum_probs=126.5

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCC-------CCeEEEeCCHHHHHHHHHhcCCCC--C------CC--------E--EE-E
Q 021539          122 NFISIPEIQARNRALKHCGLSED-------EYLVLFVPNYKEAMLMIGESYPFF--K------GN--------Y--YL-T  175 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~d-------ey~VvFTsnaTealnlv~~s~~~~--~------Gd--------~--Il-s  175 (311)
                      .......+++++.+++++|++.+       ...++||+|+|+|+++++.+....  +      |+        .  |+ +
T Consensus       109 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s  188 (486)
T 1js3_A          109 PACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYAS  188 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEEC
Confidence            33445556899999999999742       135899999999988766543100  0      32        3  43 5


Q ss_pred             ccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCC-ceEEEEecc--cccchhcHHHHHH-HHHCC
Q 021539          176 IISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTP-KGLFSYPVV--VNGTRYSMHWISE-AHRNA  251 (311)
Q Consensus       176 ~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~-t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g  251 (311)
                      ...|.+  +...++..|++++.+|++. ++.+|.++|+++++++++... ..+|++++.  .+|.+.|+++|.+ |+++|
T Consensus       189 ~~~h~s--~~~~~~~~G~~v~~v~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~  265 (486)
T 1js3_A          189 DQAHSS--VERAGLIGGVKLKAIPSDG-KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEED  265 (486)
T ss_dssp             TTCCHH--HHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTT
T ss_pred             CCCcHH--HHHHHHhCCCceEEeecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcC
Confidence            556653  3344455699999999975 789999999999986531111 125555543  6999999999976 69999


Q ss_pred             cEEEecccccCccCcccC-CCC-----CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          252 WHVLLDATGLVFGEDQLA-LAL-----HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       252 ~~vlvDAaQsv~G~~pld-l~~-----l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +++|+|++|+. +....+ +..     .++|++++++|| +++.|.|+|++++|++
T Consensus       266 ~~lhvD~a~g~-~~~~~~~~~~~~~g~~~adsi~~~~hK-~~~~p~~~G~l~~~~~  319 (486)
T 1js3_A          266 IWLHVDAAYAG-SAFICPEFRHLLNGVEFADSFNFNPHK-WLLVNFDCSAMWVKRR  319 (486)
T ss_dssp             CEEEEECTTGG-GGGGSTTTGGGGTTGGGCSEEEECHHH-HSSCCSSCEEEEESCH
T ss_pred             CEEEEehhhHH-HHHHCHHHHHHhcCccccCeeEEchhh-hcCCCcceEEEEEeCH
Confidence            99999999998 765442 321     268999999999 6655999999999865

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.75  E-value=2.1e-17  Score=161.10  Aligned_cols=161  Identities=10%  Similarity=0.053  Sum_probs=124.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|++  +  +++++|+|+|+++++.++ +++||+|+ +..+|+..  .+..++++.|+++.+
T Consensus        77 ~r~~~p~~~~le~~lA~l~g~~--~--~i~~ssGt~Ai~~al~~l-~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~  151 (415)
T 2fq6_A           77 GRRGTLTHFSLQQAMCELEGGA--G--CVLFPCGAAAVANSILAF-IEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSW  151 (415)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHTT-CCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred             cCCCCchHHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence            5666667789999999999984  2  566688899999999987 57899986 55566532  233334556999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH--CCcEEEecccccCcc--CcccCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVFG--EDQLAL  270 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G--~~pldl  270 (311)
                      ++.+      |+++|+++++++     +++|.+...  .+|.++|+++|.+ ||+  +|+++++|++|+. +  ..|+  
T Consensus       152 v~~~------d~~~le~ai~~~-----tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~-~~~~~p~--  217 (415)
T 2fq6_A          152 FDPL------IGADIVKHLQPN-----TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAA-GVLFKAL--  217 (415)
T ss_dssp             ECTT------CGGGGGGGCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTT-TTSSCGG--
T ss_pred             ECCC------CHHHHHHhhccC-----CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcc-cccCCcc--
Confidence            8764      567888888764     678887644  6999999999976 699  9999999999996 5  4455  


Q ss_pred             CCCCCcEEEEccccCcCCCCCc---eEEEEEeCCCC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~  303 (311)
                       .+++|++++|+|| ++| |.|   .|+++.+++..
T Consensus       218 -~~g~Div~~S~sK-~lg-~~g~~~~G~l~~~~~~~  250 (415)
T 2fq6_A          218 -DFGIDVSIQAATK-YLV-GHSDAMIGTAVCNARCW  250 (415)
T ss_dssp             -GGTCSEEEEETTT-TTT-CSSSCCCEEEEECTTTH
T ss_pred             -ccCCeEEEEeCcc-ccC-CCCCceEEEEEeCHHHH
Confidence             3589999999999 888 555   69999887654

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.75  E-value=1.5e-17  Score=165.74  Aligned_cols=181  Identities=15%  Similarity=0.048  Sum_probs=130.9

Q ss_pred             CCcc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------------CCCCEEE-EccCcCh
Q 021539          117 TSFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------------FKGNYYL-TIISEES  181 (311)
Q Consensus       117 ss~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------------~~Gd~Il-s~~eh~~  181 (311)
                      .+|. +.......+++++.+++++|.+.+...++||+|+|+|+..++.+...             .+++.|+ +...|.+
T Consensus       125 ~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s  204 (511)
T 3vp6_A          125 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS  204 (511)
T ss_dssp             SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred             CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence            3454 34445555789999999999975434699999999998776443211             1344565 5556653


Q ss_pred             HHHHHHHHhCCc---EEEEEeCCCCCcccCHHHHHhhhhccC-CCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEE
Q 021539          182 DYIKGFAAQKES---KVIAAPETWLDLRIKGSQLSQNFRRKC-KYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHV  254 (311)
Q Consensus       182 ~~~~~la~~~G~---~V~~vp~~~~~g~id~~~L~~~l~~~~-~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~v  254 (311)
                        +...++..|.   +++.+|.+. ++.+|.++|++.++++. ....+.+|++++.  .+|.+.|+++|.+ |+++|+++
T Consensus       205 --~~~~~~~~g~g~~~~~~v~~d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~l  281 (511)
T 3vp6_A          205 --IKKAGAALGFGTDNVILIKCNE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWL  281 (511)
T ss_dssp             --HHHHHHHTTSCGGGEEEECBCT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEE
T ss_pred             --HHHHHHHcCCCCCcEEEeecCC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEE
Confidence              2333444566   899999886 78999999999997531 1111456666654  6999999999976 69999999


Q ss_pred             EecccccCccCccc-----CCC-CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          255 LLDATGLVFGEDQL-----ALA-LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       255 lvDAaQsv~G~~pl-----dl~-~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |||++++. |....     ++. ..++|++++++|| |++.|.|+|+++++++.
T Consensus       282 hvD~a~~~-~~~~~~~~~~~~~g~~~aDsv~~~~hK-~l~~p~g~g~l~~~~~~  333 (511)
T 3vp6_A          282 HVDAAWGG-GLLMSRKHRHKLNGIERANSVTWNPHK-MMGVLLQCSAILVKEKG  333 (511)
T ss_dssp             EEEETTGG-GGGGCTTTGGGGTTGGGCSEEEECTTS-TTCCCSCCEEEEESSTT
T ss_pred             EEEccchh-hHhhChhhhhhccCCccCCEEEECccc-ccCCCcCeEEEEEeCHH
Confidence            99999998 87632     232 1367999999999 55559999999998764

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.75  E-value=1.2e-17  Score=166.00  Aligned_cols=169  Identities=12%  Similarity=0.003  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHHcCCC--CCC-CeEEEeCCHHHHHHHHHhcCCCC-------CCC-----EEE-EccCcChHHHHHH
Q 021539          124 ISIPEIQARNRALKHCGLS--EDE-YLVLFVPNYKEAMLMIGESYPFF-------KGN-----YYL-TIISEESDYIKGF  187 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~--~de-y~VvFTsnaTealnlv~~s~~~~-------~Gd-----~Il-s~~eh~~~~~~~l  187 (311)
                      +....+++|+.+++++|++  +++ ..-+||+|+|+|+++++.++...       +|+     +|+ +...|.+  +...
T Consensus        93 ~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s--~~~~  170 (502)
T 3hbx_A           93 TTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC--WEKF  170 (502)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH--HHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH--HHHH
Confidence            4555668999999999997  433 12347999999999877654211       244     665 5455543  4455


Q ss_pred             HHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC------CcEEEecc
Q 021539          188 AAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN------AWHVLLDA  258 (311)
Q Consensus       188 a~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~------g~~vlvDA  258 (311)
                      ++..|++++.+|.++.++.+|+++|+++++++     +.+|++.+.  .+|.+.|+++|.+ |+++      |+++|||+
T Consensus       171 ~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~-----t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~  245 (502)
T 3hbx_A          171 ARYFEVELKEVKLSEGYYVMDPQQAVDMVDEN-----TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDA  245 (502)
T ss_dssp             HHHTTCEEEEECCBTTBCSCCHHHHHHHCCTT-----EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             HHHcCceeEEEecCCCcCcCCHHHHHHHHhhC-----CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEEC
Confidence            66679999999987634889999999999875     466665543  6999999999976 6887      99999999


Q ss_pred             ccc-------CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          259 TGL-------VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       259 aQs-------v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      ||+       . +..+.++...++|++++|+|||++| |.|+|+++++++
T Consensus       246 A~~~~~~p~~~-~~~~~~~~~~~~D~v~~s~hK~l~~-p~g~G~~~~~~~  293 (502)
T 3hbx_A          246 ASGGFIAPFLY-PELEWDFRLPLVKSINVSGHKYGLV-YAGIGWVIWRNK  293 (502)
T ss_dssp             TTGGGTHHHHC-TTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSG
T ss_pred             CccchhhhhhC-cccccccCCCCceEEEECcccccCC-CCCeEEEEEeCH
Confidence            998       4 5566777777899999999994445 999999999854

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.74  E-value=2.5e-17  Score=154.72  Aligned_cols=158  Identities=13%  Similarity=0.020  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    .++||+|+|+|+++++.++.+.+||.|+ ...+|++. . ..++..|+++..++.+..+
T Consensus        36 ~~~~~l~~~la~~~~~~----~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~  109 (373)
T 3frk_A           36 DEDKKFEQEFADYCNVN----YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIAT-A-LAVSYTGAKPIFVEPDIRT  109 (373)
T ss_dssp             HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHH-H-HHHHHHSCEEEEECEETTT
T ss_pred             chHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH-H-HHHHHcCCEEEEEeccccc
Confidence            44678999999999984    3999999999999999998778899986 56666642 2 2234459999999987546


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCT  281 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S  281 (311)
                      +.+|.++|++.++++     +++|.+. +.+|.+.|+++|.+ |+++|+++++|++|+. |.. ++....+  +|++++|
T Consensus       110 ~~~d~~~l~~~l~~~-----~~~v~~~-n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~-g~~-~~~~~~~~~~d~~~~S  181 (373)
T 3frk_A          110 YNIDPSLIESAITEK-----TKAIIAV-HLYGQPADMDEIKRIAKKYNLKLIEDAAQAH-GSL-YKGMKVGSLGDAAGFS  181 (373)
T ss_dssp             TEECGGGTGGGCCTT-----EEEEEEE-CCTTCCCCHHHHHHHHHHHTCEEEEECTTCT-TCE-ETTEETTSSSSEEEEE
T ss_pred             cCcCHHHHHHhcCCC-----CeEEEEE-CCCcCcccHHHHHHHHHHcCCEEEEECCccc-CCE-ECCEeccccccEEEEe
Confidence            788999999988764     5666632 36999999999966 6999999999999999 876 6666656  8999999


Q ss_pred             --cccCcCCCCCceEEEEEe
Q 021539          282 --LDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       282 --~HK~l~G~P~GiG~L~vr  299 (311)
                        .|| ++| |.|.|++++.
T Consensus       182 ~~~~K-~l~-~~g~gg~~~~  199 (373)
T 3frk_A          182 FYPAK-NLG-SLGDGGAVVT  199 (373)
T ss_dssp             CCTTS-SSC-CSSSCEEEEE
T ss_pred             CcCCC-ccC-ccceeEEEEe
Confidence              669 777 5444544444

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.74  E-value=8.2e-18  Score=166.06  Aligned_cols=176  Identities=7%  Similarity=-0.091  Sum_probs=123.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCC-------CeEEEeCCHHHHHHHHHhcCCC------------------CCCCEEE-
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDE-------YLVLFVPNYKEAMLMIGESYPF------------------FKGNYYL-  174 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~de-------y~VvFTsnaTealnlv~~s~~~------------------~~Gd~Il-  174 (311)
                      +..+...++++.+.+++++|.+.+.       ...+||+|+|+|+.+.+.....                  .+++.|+ 
T Consensus       108 ~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~  187 (475)
T 3k40_A          108 SPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYC  187 (475)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEE
Confidence            3444555568999999999997421       2599999999997655433210                  0123454 


Q ss_pred             EccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHHH-HHHC
Q 021539          175 TIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWISE-AHRN  250 (311)
Q Consensus       175 s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~  250 (311)
                      +..+|.+  +...++..|++++.+|++. ++ +++++|+++|+++.+. ..+.+|++++.  .+|.+.|+++|.+ |+++
T Consensus       188 s~~~H~s--~~~~~~~~g~~~~~v~~d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~  263 (475)
T 3k40_A          188 SDQAHSS--VERAGLLGGVKLRSVQSEN-HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKH  263 (475)
T ss_dssp             ETTSCHH--HHHHHHHHTCEEEEECCBT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred             CCCchHH--HHHHHHHcCCceEEEECCC-CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHh
Confidence            5566653  2233444589999999986 78 9999999999864211 11345665554  6999999999976 6999


Q ss_pred             CcEEEecccccCccCcccC-----CCC-CCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          251 AWHVLLDATGLVFGEDQLA-----LAL-HRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       251 g~~vlvDAaQsv~G~~pld-----l~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |+++|+||+|+. +....+     +.. .++|++++++|| +++.|.|+|+|+++++.
T Consensus       264 ~~~lhvD~A~~~-~~~~~~~~~~~~~gi~~~Ds~~~~~hK-~l~~p~g~g~l~~~~~~  319 (475)
T 3k40_A          264 NLWIHVDAAYAG-SAFICPEYRHLMKGIESADSFNFNPHK-WMLVNFDCSAMWLKDPS  319 (475)
T ss_dssp             TCEEEEECTTGG-GGGGSGGGGGGGTTGGGCSEEEECHHH-HSSCCSSCEEEEESSGG
T ss_pred             CCeEEEeHHhHH-HHHhCHhhHHHhcCcccCCEEEECchh-ccCCCCceEEEEEeCHH
Confidence            999999999987 643221     111 246999999999 55559999999999753

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.73  E-value=2.7e-17  Score=151.70  Aligned_cols=173  Identities=13%  Similarity=0.093  Sum_probs=131.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .....++.++.+++++|++++  +|+||+|+|+|+++++.++ ..+|+.|+ ....|+.......++..|.++..+|.+ 
T Consensus        47 ~~~~~~~~~~~l~~~~g~~~~--~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-  122 (359)
T 1svv_A           47 QDSHCAKAARLIGELLERPDA--DVHFISGGTQTNLIACSLA-LRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-  122 (359)
T ss_dssp             CSHHHHHHHHHHHHHHTCTTS--EEEEESCHHHHHHHHHHHH-CCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-
T ss_pred             ccHHHHHHHHHHHHHhCCCCc--cEEEeCCchHHHHHHHHHH-hCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-
Confidence            355678999999999998654  4999999999999999887 46788876 444554221100234569999999985 


Q ss_pred             CCcccCHHHHHhhhhccC--CCCCceEEEEecc-cccchhc---HHHHHH-HHHCCcEEEecccc---cCccCcccCCCC
Q 021539          203 LDLRIKGSQLSQNFRRKC--KYTPKGLFSYPVV-VNGTRYS---MHWISE-AHRNAWHVLLDATG---LVFGEDQLALAL  272 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~--~~~~t~LVs~~~~-~tG~i~P---i~~I~~-a~~~g~~vlvDAaQ---sv~G~~pldl~~  272 (311)
                       ++.+|.++|++.++++.  ...++++|.+.+. .+|.++|   +++|.+ |+++|+++++|++|   ++ |..+.+...
T Consensus       123 -~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~  200 (359)
T 1svv_A          123 -DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASAL-SSPVNDLTL  200 (359)
T ss_dssp             -TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHH-TSTTCCCCH
T ss_pred             -CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhh-cCCCcchhh
Confidence             57789999999997631  0012567766654 5899999   667755 68999999999999   77 777766543


Q ss_pred             ----CCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          273 ----HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       273 ----l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                          ..+|++++|+|| ++| |.|+|+++++++..+
T Consensus       201 ~~~~~~~d~~~~s~~K-~g~-~~~~g~l~~~~~~~~  234 (359)
T 1svv_A          201 ADIARLTDMFYIGATK-AGG-MFGEALIILNDALKP  234 (359)
T ss_dssp             HHHHHHCSEEEEECTT-TTC-SSCEEEEECSGGGCT
T ss_pred             hhhhhcCCEEEEeccc-CCC-CCceEEEEEcccHHH
Confidence                468999999999 755 999999999887754

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.72  E-value=2.7e-17  Score=158.15  Aligned_cols=157  Identities=9%  Similarity=-0.021  Sum_probs=120.0

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......+++|+++|+++|++  + .|+|++| |+|+++++. + +++||+|++ ..+|+..  .+...++..|+++..
T Consensus        50 ~~~~~~~~~~lr~~la~~~g~~--~-~i~~~sG-t~a~~~al~-~-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~  123 (393)
T 1n8p_A           50 SRSQNPNRENLERAVAALENAQ--Y-GLAFSSG-SATTATILQ-S-LPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSF  123 (393)
T ss_dssp             TTTCCHHHHHHHHHHHHHTTCS--E-EEEESCH-HHHHHHHHH-T-SCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred             ecCCChhHHHHHHHHHHHhCCC--c-EEEECCh-HHHHHHHHH-H-cCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence            5555666789999999999985  2 3555555 999999998 5 578999864 4444422  222234556999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC----CcEEEecccccCccCcccCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN----AWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~----g~~vlvDAaQsv~G~~pldl  270 (311)
                      +|.+      | ++|+++++++     +++|.+...  .+|.++|+++|.+ |+++    |+++++|++|+. +... ++
T Consensus       124 v~~~------d-~~l~~~i~~~-----t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~-~~~~-~~  189 (393)
T 1n8p_A          124 TNDL------L-NDLPQLIKEN-----TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLS-PYIS-NP  189 (393)
T ss_dssp             ESSH------H-HHHHHHSCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTH-HHHC-CG
T ss_pred             eCCC------h-HHHHHhcccC-----ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccc-cccC-CH
Confidence            8864      5 7888888754     678887644  6999999999966 6898    999999999998 7653 55


Q ss_pred             CCCCCcEEEEccccCcCCCCCc--e-EEEEEe
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLK--I-TCLLVR  299 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~G--i-G~L~vr  299 (311)
                      ..+++|++++|+|| ++| |.|  + |+++.+
T Consensus       190 ~~~~~di~~~S~sK-~~g-~~G~rigG~~~~~  219 (393)
T 1n8p_A          190 LNFGADIVVHSATK-YIN-GHSDVVLGVLATN  219 (393)
T ss_dssp             GGGTCSEEEEETTT-TTT-CSSCCCCEEEEES
T ss_pred             HHcCCeEEEEECcc-ccc-CCCCceeEEEEeC
Confidence            56789999999999 888 778  7 877775

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.71  E-value=3.9e-18  Score=158.32  Aligned_cols=163  Identities=17%  Similarity=0.182  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCH-HHHHHHHHhcCCC--CCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNY-KEAMLMIGESYPF--FKGNYYL-TIISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsna-Tealnlv~~s~~~--~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      .....++.|+.+++++|++ +.++|+||+|+ |+|+.+++.++..  .+|+.|+ +..+|..   ...++..| +++.+|
T Consensus        46 ~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~---~~~~~~~g-~~~~v~  120 (360)
T 1w23_A           46 YEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA---LKEAKLLG-ETHIAA  120 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH---HHHHHTTS-EEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH---HHHHHHhC-CeEEee
Confidence            3445679999999999996 33469999999 9999988877643  2355555 3333332   22345669 999999


Q ss_pred             CCCCCcccCHHHHHh-hhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539          200 ETWLDLRIKGSQLSQ-NFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       200 ~~~~~g~id~~~L~~-~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      .+.+++.++.++|++ .++++     +++|.+++.  .||.++|  +|.+  ++|+++++|++|+. |..++++..+  |
T Consensus       121 ~~~~~~~~d~~~l~~~~i~~~-----~k~v~~~~~~nptG~~~~--~i~~--~~~~~li~D~a~~~-~~~~~~~~~~--d  188 (360)
T 1w23_A          121 STKANSYQSIPDFSEFQLNEN-----DAYLHITSNNTIYGTQYQ--NFPE--INHAPLIADMSSDI-LSRPLKVNQF--G  188 (360)
T ss_dssp             ECGGGTSCSCCCGGGCCCCTT-----EEEEEEESEETTTTEECS--SCCC--CCSSCEEEECTTTT-TSSCCCGGGC--S
T ss_pred             cccccCcCCccchHhhccCCC-----CCEEEEeCCCCCcceecc--cccc--cCCceEEEechhhc-CCCCcCcccC--C
Confidence            864345678888887 77543     678777654  5999988  4433  79999999999999 9998888754  9


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++++|+|| +|| |.|+|+++++++..+.
T Consensus       189 i~~~s~sK-~~~-~~G~G~~~~~~~~~~~  215 (360)
T 1w23_A          189 MIYAGAQK-NLG-PSGVTVVIVKKDLLNT  215 (360)
T ss_dssp             EEEEETTT-TTS-CTTCEEEEEEHHHHCS
T ss_pred             EEEEEccc-ccC-CCCcEEEEEcHHHHhh
Confidence            99999999 889 8899999999876543

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.71  E-value=1.1e-16  Score=150.72  Aligned_cols=161  Identities=9%  Similarity=-0.003  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++   +.|+||+| |+|+++++.++...+|++|+ +..+|+..  ...++..|+++..+|++..+
T Consensus        38 ~~~~~l~~~la~~~~~~---~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~  111 (388)
T 1b9h_A           38 DEVNSFEREFAAHHGAA---HALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISS--SQAAQRLGAVTVPVDVDAAT  111 (388)
T ss_dssp             SHHHHHHHHHHHHTTCS---EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTT
T ss_pred             HHHHHHHHHHHHHhCCC---eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHH--HHHHHHcCCEEEEEecCCCc
Confidence            34568999999999985   34666665 99999999988667899876 56677643  22345679999999987544


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc--cCCCCCC-CcEEEE
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--LALALHR-PDLVLC  280 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~l~-~Dfl~~  280 (311)
                      +.++.++|++.++++     +++|. +.+.+|.++|+++|.+ |+++|+++++|++|+. |...  .++..++ +++.+|
T Consensus       112 ~~~d~~~l~~~i~~~-----~~~v~-~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~-g~~~~~~~~~~~~~i~~~S~  184 (388)
T 1b9h_A          112 YNLDPEAVAAAVTPR-----TKVIM-PVHMAGLMADMDALAKISADTGVPLLQDAAHAH-GARWQGKRVGELDSIATFSF  184 (388)
T ss_dssp             CCBCHHHHHHHCCTT-----EEEEC-CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCT-TCEETTEEGGGSSSCEEEEC
T ss_pred             CCCCHHHHHHhcCcC-----ceEEE-EeCCccCcCCHHHHHHHHHHcCCEEEEecchhc-CCccCCeecccccceEEEEc
Confidence            778999999998754     56666 4447999999999966 6999999999999998 8765  5555555 788888


Q ss_pred             ccccCcCCCCCceEEEEEeCC
Q 021539          281 TLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      |.|| +++++ ..|+++.+++
T Consensus       185 s~~K-~l~g~-~~G~~~~~~~  203 (388)
T 1b9h_A          185 QNGK-LMTAG-EGGAVVFPDG  203 (388)
T ss_dssp             CTTS-SSCSS-SCEEEEECTT
T ss_pred             cCCC-cccCC-CeEEEEECCH
Confidence            8999 55435 4587777765

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.71  E-value=2.8e-16  Score=154.90  Aligned_cols=163  Identities=15%  Similarity=0.056  Sum_probs=125.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHH---HHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYI---KGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~---~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|++   ..|+|++|+ +|+++++.++ +++||+|++...++....   ...++..|+++.+
T Consensus       109 ~r~~~~~~~~l~~~lA~l~g~~---~~v~~~sG~-~Ai~~al~~l-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~  183 (445)
T 1qgn_A          109 GRYGNPTTVVLEEKISALEGAE---STLLMASGM-CASTVMLLAL-VPAGGHIVTTTDCYRKTRIFIETILPKMGITATV  183 (445)
T ss_dssp             GGGCCHHHHHHHHHHHHHHTCS---EEEEESCHH-HHHHHHHHHH-SCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred             cCCCChHHHHHHHHHHHHhCCC---cEEEeCCHH-HHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence            6666777889999999999984   246666665 9999999876 468999875444342222   2234566999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCc-eEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPK-GLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t-~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      +|.+      |.++|+++++++     + ++|.+...  .+|.++|+++|.+ ||++|+++++|.+|+. |..... ..+
T Consensus       184 v~~~------d~~~l~~ai~~~-----tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~-~~~~~~-~~~  250 (445)
T 1qgn_A          184 IDPA------DVGALELALNQK-----KVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT-PLNQKA-LAL  250 (445)
T ss_dssp             ECSS------CHHHHHHHHHHS-----CEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC-TTTCCT-TTT
T ss_pred             eCCC------CHHHHHHHhccC-----CCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCc-ccc
Confidence            8864      678999999875     5 78777543  6999999999966 6999999999999998 764333 346


Q ss_pred             CCcEEEEccccCcCCCCCc---eEEEEEeCCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLK---ITCLLVRRKSF  303 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~  303 (311)
                      ++|++++|+|| ++| |.|   +|+++.++++.
T Consensus       251 g~Div~~S~sK-~~g-g~gd~~~G~l~~~~~l~  281 (445)
T 1qgn_A          251 GADLVLHSATK-FLG-GHNDVLAGCISGPLKLV  281 (445)
T ss_dssp             TCSEEEECTTT-TTT-CSSSCCCEEEEECHHHH
T ss_pred             CCEEEEECCcc-ccc-ccccceEEEEEECHHHH
Confidence            89999999999 888 667   99999886543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.71  E-value=4.1e-17  Score=150.56  Aligned_cols=154  Identities=8%  Similarity=-0.059  Sum_probs=118.2

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      +.|+++|+++|++ +  .|+|++| |+|+++++.++ +.+|++|+ +..+|+..  .+..+++..|+++..+|..     
T Consensus         2 ~l~~~la~~~g~~-~--~i~~~sG-~~a~~~~~~~~-~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----   71 (331)
T 1pff_A            2 ALEGKIAKLEHAE-A--CAATASG-MGAIAASVWTF-LKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA-----   71 (331)
T ss_dssp             HHHHHHHHHHTCS-E--EEEESSH-HHHHHHHHHHH-CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----
T ss_pred             hHHHHHHHHhCCC-e--EEEeCCh-HHHHHHHHHHh-cCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCC-----
Confidence            5789999999985 2  3655555 89999999876 46889876 55566532  3333345679999888762     


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH-CCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR-NAWHVLLDATGLVFGEDQLALALHRPDLVLCTL  282 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~  282 (311)
                       |.++|++.++++     +++|.+.+.  .+|.++|+++|.+ |++ +|+++++|++|+. |....++ ..++|++++|+
T Consensus        72 -d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~-~~~~~~~-~~~~d~~~~s~  143 (331)
T 1pff_A           72 -VPGNIEKHLKPN-----TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFAS-PILTNPL-DLGVDIVVHSA  143 (331)
T ss_dssp             -STTHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTH-HHHCCGG-GGTCSEEEEET
T ss_pred             -CHHHHHHhhcCC-----CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcc-cccCChh-hcCCcEEEEEC
Confidence             467788888754     577777544  5999999999966 699 9999999999998 8765555 46899999999


Q ss_pred             ccCcCCCCCc--eEEEEEeC-CC
Q 021539          283 DNNTHAQPLK--ITCLLVRR-KS  302 (311)
Q Consensus       283 HK~l~G~P~G--iG~L~vr~-~~  302 (311)
                      || ++|+|.+  .|+++.++ +.
T Consensus       144 ~K-~~~~~~~r~~G~~~~~~~~~  165 (331)
T 1pff_A          144 TK-YINGHTDVVAGLVCSRADII  165 (331)
T ss_dssp             TT-TTSSSSSCCCEEEEECHHHH
T ss_pred             cc-ccCCCCCceEEEEEeCcHHH
Confidence            99 6665876  79999887 54

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.70  E-value=3e-16  Score=149.39  Aligned_cols=160  Identities=10%  Similarity=-0.056  Sum_probs=126.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.|+.+|+++|+  +  .|+||+|+|+|+++++.++.+.+|+.|+ ...+|+...  ..++..|+++..+|.+. ++
T Consensus        33 ~~~~l~~~la~~~~~--~--~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~-~~  105 (394)
T 1o69_A           33 FVNRFEQSVKDYSKS--E--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV--APICYLKAKPVFIDCDE-TY  105 (394)
T ss_dssp             HHHHHHHHHHHHHCC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT--HHHHHTTCEEEEECBCT-TS
T ss_pred             HHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEEeCC-CC
Confidence            456899999999998  3  4999999999999999998667899886 555666321  22334699999999874 77


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--C-CCCcEEEEc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA--L-HRPDLVLCT  281 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~--~-l~~Dfl~~S  281 (311)
                      .+|.++|++.+++..  ..+++|.+.+ .+|...|+++|.+ |+++|+++++|++|+. |....+..  . .++|+++||
T Consensus       106 ~~d~~~l~~~i~~~~--~~~~~v~~~~-~~G~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~~~~~~~~~~~~~~s~s  181 (394)
T 1o69_A          106 NIDVDLLKLAIKECE--KKPKALILTH-LYGNAAKMDEIVEICKENDIVLIEDAAEAL-GSFYKNKALGTFGEFGVYSYN  181 (394)
T ss_dssp             SBCHHHHHHHHHHCS--SCCCEEEEEC-GGGCCCCHHHHHHHHHHTTCEEEEECTTCT-TCEETTEETTSSSSEEEEECC
T ss_pred             CcCHHHHHHHHhccc--CCceEEEEEC-CCCChhhHHHHHHHHHHcCCEEEEECcCcc-cceeCCcccccccCcEEEEEe
Confidence            899999999997621  0146776655 6999999999966 6999999999999998 76654432  1 368999999


Q ss_pred             cccCcCCCCCceEEEEEe
Q 021539          282 LDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       282 ~HK~l~G~P~GiG~L~vr  299 (311)
                      .|| .+| |.++|+++++
T Consensus       182 ~~K-~l~-~~~~G~~~~~  197 (394)
T 1o69_A          182 GNK-IIT-TSGGGMLIGK  197 (394)
T ss_dssp             TTS-SSC-CSSCEEEEES
T ss_pred             CCc-cCC-CCCceEEEEC
Confidence            999 888 7799999996

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.70  E-value=3.4e-16  Score=148.35  Aligned_cols=161  Identities=13%  Similarity=0.025  Sum_probs=124.2

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+.+|+++|++   ..|+|++| |+|+++++.++ +++|++|+ ...+|+.  ..++.+++..|+++..
T Consensus        47 ~~~~~~~~~~l~~~la~~~~~~---~~i~~~sG-t~a~~~~~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  121 (386)
T 1cs1_A           47 SRRGNPTRDVVQRALAELEGGA---GAVLTNTG-MSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF  121 (386)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS---EEEEESSH-HHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             eCCCCccHHHHHHHHHHHhCCC---cEEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence            4455566779999999999985   24777666 99999999887 56889886 4556653  2244455667999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      +|.+      +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|.+|+. +....++ ..+
T Consensus       122 ~~~~------d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~-~~~  188 (386)
T 1cs1_A          122 VDQG------DEQALRAALAEK-----PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLS-PALQNPL-ALG  188 (386)
T ss_dssp             ECTT------CHHHHHHHHHTC-----CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC-TTTCCGG-GGT
T ss_pred             eCCC------CHHHHHHhhccC-----CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCcc-ccC
Confidence            8763      678899988764     467766544  6899999999966 6999999999999998 7765444 368


Q ss_pred             CcEEEEccccCcCCCCCce--EEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLKI--TCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~Gi--G~L~vr~  300 (311)
                      +|++++|+|| ++|+|.+.  |++++++
T Consensus       189 ~di~~~s~sK-~~~~~~~~~~G~~~~~~  215 (386)
T 1cs1_A          189 ADLVLHSCTK-YLNGHSDVVAGVVIAKD  215 (386)
T ss_dssp             CSEEEEETTT-TTTCSSCCCCEEEEESS
T ss_pred             ceEEEEcCcc-cccCCCCceeEEEEeCc
Confidence            9999999999 66658764  9999886

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.70  E-value=1.9e-16  Score=148.80  Aligned_cols=164  Identities=11%  Similarity=0.052  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC--CCCc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET--WLDL  205 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~--~~~g  205 (311)
                      .+.|+.+++++++++++  |+||+|+|+|+++++.++ +.+|+.|+ ....|+.  +...++..|.++..+|.+  ..++
T Consensus        64 ~~l~~~la~~~~~~~~~--v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~  138 (381)
T 1v2d_A           64 PALREALAEEFAVEPES--VVVTSGATEALYVLLQSL-VGPGDEVVVLEPFFDV--YLPDAFLAGAKARLVRLDLTPEGF  138 (381)
T ss_dssp             HHHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECEEETTEE
T ss_pred             HHHHHHHHHhcCCChhh--EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh--HHHHHHHcCCEEEEEeCCCCCccC
Confidence            48999999999998655  999999999999999887 57889886 4455653  223345679999999986  2246


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc--cCcccCCC--CCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--GEDQLALA--LHRP  275 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~--~l~~  275 (311)
                      .++.++|++.++++     +++|.+...  .||.++|   +++|.+ |+++|+++++|.+|+..  |..+.++.  ..+.
T Consensus       139 ~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~  213 (381)
T 1v2d_A          139 RLDLSALEKALTPR-----TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPER  213 (381)
T ss_dssp             ECCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTT
T ss_pred             CcCHHHHHHhcCcC-----CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCC
Confidence            78999999888653     567666533  5999988   566654 68999999999999851  33334443  3479


Q ss_pred             cEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      |++++|+|| ++| +.|  +|++++++++.+
T Consensus       214 ~~~~~s~sK-~~~-~~G~r~G~~~~~~~~~~  242 (381)
T 1v2d_A          214 TFTVGSAGK-RLE-ATGYRVGWIVGPKEFMP  242 (381)
T ss_dssp             EEEEEEHHH-HTT-CGGGCCEEEECCTTTHH
T ss_pred             EEEEeechh-hcC-CcccceEEEEeCHHHHH
Confidence            999999999 888 558  899999877644

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.70  E-value=4e-16  Score=145.78  Aligned_cols=158  Identities=11%  Similarity=0.052  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    .++||+|+|+|+++++.++.+.+|+.|+ ...+|+. . ...++..|.++..+|.+ .+
T Consensus        38 ~~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~-~-~~~~~~~g~~~~~~~~~-~~  110 (374)
T 3uwc_A           38 AELEKFEKRFAALHNAP----HAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIA-S-VGAIVQAGATPVLVDSE-NG  110 (374)
T ss_dssp             HHHHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH-H-HHHHHHTTCEEEEECBC-TT
T ss_pred             hhHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHH-H-HHHHHHcCCEEEEEecC-CC
Confidence            34568999999999985    3999999999999999988667899986 4455553 2 23345679999999987 37


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCT  281 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S  281 (311)
                      +.+|.++|++.++++     +++|. +.+.+|.+.|+++|.+ |+++|+++++|++|+. |.. ++....+  +|++++|
T Consensus       111 ~~~d~~~l~~~~~~~-----~~~v~-~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~-g~~-~~~~~~~~~~d~~~~s  182 (374)
T 3uwc_A          111 YVIDPEKIEAAITDK-----TKAIM-PVHYTGNIADMPALAKIAKKHNLHIVEDACQTI-LGR-INDKFVGSWGQFACFS  182 (374)
T ss_dssp             SSBCGGGTGGGCCTT-----EEEEC-CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCT-TCE-ETTEETTSSSSEEEEE
T ss_pred             CCcCHHHHHHhCCCC-----ceEEE-EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCcc-Cce-eCCeeccccccEEEEe
Confidence            788999999888764     45665 3347999999999966 6999999999999998 865 5544444  7999999


Q ss_pred             cc--cCcCCCCCc-eEEEEEeC
Q 021539          282 LD--NNTHAQPLK-ITCLLVRR  300 (311)
Q Consensus       282 ~H--K~l~G~P~G-iG~L~vr~  300 (311)
                      +|  | ++| |.| .|+++.++
T Consensus       183 ~~~~K-~l~-~~g~~g~~~~~~  202 (374)
T 3uwc_A          183 LHPLK-NLN-VWSDAGVIITHS  202 (374)
T ss_dssp             CSSSS-SSC-CSSCCEEEEESC
T ss_pred             CCCCC-cCC-ccceeEEEEeCC
Confidence            88  9 777 434 55555444

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.69  E-value=2.3e-17  Score=163.06  Aligned_cols=169  Identities=14%  Similarity=0.013  Sum_probs=123.0

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCC--CeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HHHH----HHhCC-
Q 021539          123 FISIPEIQARNRALKHCGLSEDE--YLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IKGF----AAQKE-  192 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~de--y~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~~l----a~~~G-  192 (311)
                      .....++.+|+.+++++|+++++  .+|+||+|+ +++..++.++ +++||+|+ ...+|....  +..+    ++..| 
T Consensus        87 ~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~  164 (483)
T 1rv3_A           87 HIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTAL-VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSI  164 (483)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHH-TCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHh-cCCCCEEEEecCccCcCcchhhhhcccCcccccc
Confidence            34455678999999999998654  358888888 7777767777 67999986 445554211  1000    00012 


Q ss_pred             -cEEEEEeCCCCCcccCHHHHHhhhh-ccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCccc
Q 021539          193 -SKVIAAPETWLDLRIKGSQLSQNFR-RKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL  268 (311)
Q Consensus       193 -~~V~~vp~~~~~g~id~~~L~~~l~-~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl  268 (311)
                       +++..++++..++.+|.++|+++++ .+     +++|.+ +. ..+.++|+++|.+ |+++|+++++|++|+. |....
T Consensus       165 ~~~~v~~~~~~~~~~iD~d~le~~i~~~~-----tklIi~-~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~-g~~~~  237 (483)
T 1rv3_A          165 FFESMAYKVNPDTGYIDYDRLEENARLFH-----PKLIIA-GTSCYSRNLDYGRLRKIADENGAYLMADMAHIS-GLVVA  237 (483)
T ss_dssp             HSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEE-CCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTH-HHHHH
T ss_pred             eEEEEECccccCCCcCCHHHHHHHHhhcC-----CcEEEE-eCCcCCCcCCHHHHHHHHHHcCCEEEEEccchh-ccccc
Confidence             3444444463468899999999998 44     467777 44 3448999999976 6999999999999998 88777


Q ss_pred             CCCCC---CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          269 ALALH---RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       269 dl~~l---~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++...   ++|++++|+|||+.| |.| |+++++++.
T Consensus       238 ~~~~~p~~~~div~~s~~K~l~G-prg-G~i~~~~~~  272 (483)
T 1rv3_A          238 GVVPSPFEHCHVVTTTTHKTLRG-CRA-GMIFYRRGV  272 (483)
T ss_dssp             TSSCCGGGTCSEEEEESSGGGCC-CSC-EEEEEECSB
T ss_pred             CCCCCCCCCCcEEEecCcccCCC-CCc-eEEEEcchh
Confidence            76655   789999999995545 999 999999864

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.69  E-value=3.8e-16  Score=149.88  Aligned_cols=160  Identities=9%  Similarity=-0.106  Sum_probs=124.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|++    .++||+|+|+|+++++.++ +++|++|+ +..+|+.  ..+..+.+..|+++..
T Consensus        61 ~r~~~~~~~~l~~~la~~~g~~----~~~~~~sGt~A~~~al~~~-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~  135 (392)
T 3qhx_A           61 ARTGNPTRTALEAALAAVEDAA----FGRAFSSGMAAADCALRAM-LRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTP  135 (392)
T ss_dssp             TTTCCHHHHHHHHHHHHHTTCS----EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEE
T ss_pred             cCCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEE
Confidence            5666677889999999999984    3899999999999998877 57899986 4555552  2233344667999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.++|+++++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|.+|+. +.. .+...++
T Consensus       136 v~~~------d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~-~~~-~~~~~~~  202 (392)
T 3qhx_A          136 VALA------DLDAVRAAIRPT-----TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFAS-PAL-QQPLSLG  202 (392)
T ss_dssp             ECTT------CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC-TTT-CCGGGGT
T ss_pred             eCCC------CHHHHHHhhCCC-----CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcc-ccc-CChHHhC
Confidence            9874      678899998764     577776533  6999999999976 6999999999999987 633 2333568


Q ss_pred             CcEEEEccccCcCCCCCc---eEEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLK---ITCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G---iG~L~vr~  300 (311)
                      +|+++.|+|| ++| |.|   .|+++.++
T Consensus       203 ~di~~~S~sK-~lg-~~g~~~~G~v~~~~  229 (392)
T 3qhx_A          203 ADVVLHSTTK-YIG-GHSDVVGGALVTND  229 (392)
T ss_dssp             CSEEEEETTT-TTT-CSSCCCCEEEEESC
T ss_pred             CcEEEEcCcc-ccC-CCCCceEEEEEECc
Confidence            9999999999 888 545   78777764

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.69  E-value=1.5e-16  Score=157.13  Aligned_cols=166  Identities=13%  Similarity=0.023  Sum_probs=127.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeE--EEeCCHHHHHHHHHhcCCCCCC--------CEEE-EccCcChHHHHHHHHhCCcE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLV--LFVPNYKEAMLMIGESYPFFKG--------NYYL-TIISEESDYIKGFAAQKESK  194 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~V--vFTsnaTealnlv~~s~~~~~G--------d~Il-s~~eh~~~~~~~la~~~G~~  194 (311)
                      ...++.++.+++++|++++...+  +||+|+|+|+.+++.++. .+|        +.|+ +...|..  +...++..|.+
T Consensus       139 ~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~-~~g~~~~g~~~d~Vi~~~~~~~~--~~~~~~~~G~~  215 (514)
T 3mad_A          139 KFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYR-DWARATKGITAPEAVVPVSAHAA--FDKAAQYFGIK  215 (514)
T ss_dssp             HHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHH-HHHHHHHCCSSCEEEEETTSCTH--HHHHHHHHTCE
T ss_pred             HHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCccchH--HHHHHHHcCCe
Confidence            34457889999999997421236  999999999999887752 222        7776 5555553  33334445999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC------
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE------  265 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~------  265 (311)
                      ++.+|.+. ++.+|.++|+++++++     +++|.++..  .+|.+.|+++|.+ |+++|+++++|++|+. +.      
T Consensus       216 v~~v~~~~-~~~~d~~~Le~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~-~~~~~~~~  288 (514)
T 3mad_A          216 LVRTPLDA-DYRADVAAMREAITPN-----TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGG-FILPWAER  288 (514)
T ss_dssp             EEEECBCT-TSCBCHHHHHHHCCTT-----EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTT-TTHHHHHH
T ss_pred             eEEeeeCC-CCCCCHHHHHHHhccC-----CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccc-ccchhHHh
Confidence            99999986 7889999999999764     567766544  5899999999976 6999999999999764 32      


Q ss_pred             -----cccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          266 -----DQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       266 -----~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                           .++++...++|++++|+|||++| |.|+|+++++++.
T Consensus       289 ~g~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~  329 (514)
T 3mad_A          289 LGYPVPPFDFRLEGVTSVSADTHKYGYG-AKGTSVILYRRPD  329 (514)
T ss_dssp             TTCCCCCCSTTSTTCCEEEECTTTTTCC-CSSCEEEEESSHH
T ss_pred             cCCCCCcccccCCCCcEEEECchhccCC-CCCeEEEEEeCHH
Confidence                 25777778899999999995566 8899999998743

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.69  E-value=4.1e-17  Score=157.94  Aligned_cols=162  Identities=11%  Similarity=0.038  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHH---HHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYK---EAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaT---ealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ....+++.|+.+++++|+++++  |+||+|+|   |+++++..   +.+|++|+ +..+|++  ..++.+++..|++++.
T Consensus       106 ~~~~~~~~~~~la~~~g~~~~~--i~~~~g~taa~ea~~~a~~---~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~  180 (438)
T 1wyu_A          106 VLQATFEYQTMIAELAGLEIAN--ASMYDGATALAEGVLLALR---ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT  180 (438)
T ss_dssp             HHHHHHHHHHHHHHHHTSSEEC--SCBSSHHHHHHHHHHHHHH---HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCccc--eEEeCcHHHHHHHHHHHHh---cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence            3455789999999999997654  89999999   66655543   35788886 5556663  3455566778999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEeccc-ccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDAT-GLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAa-Qsv~G~~pldl~~l~  274 (311)
                      +|.+  ++.+|.++    ++++     +++|.+++. .+|.+.|+++|.+ ||++|+++++|+. |++ |..+.+ ..++
T Consensus       181 v~~~--~~~~d~~~----i~~~-----t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~-g~~~~~-~~~g  247 (438)
T 1wyu_A          181 LPLE--GGRTPLPE----VGEE-----VGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSL-GVLKPP-GAYG  247 (438)
T ss_dssp             ECCB--TTBCCCCC----CCTT-----EEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGG-GTBCCH-HHHT
T ss_pred             EcCc--CCccCHHH----hCCC-----eEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhc-cCcCCC-ccCC
Confidence            9873  46677654    4433     677777654 6999999999976 6999999998876 777 765554 4568


Q ss_pred             CcEEEEcccc-----CcCCCCCceEEEEEeCCCCcc
Q 021539          275 PDLVLCTLDN-----NTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       275 ~Dfl~~S~HK-----~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +|++++|+||     |++| | |+|+++++++..+.
T Consensus       248 ~D~~~~s~kk~~~~~~~~G-p-~~G~l~~~~~~~~~  281 (438)
T 1wyu_A          248 ADIAVGDGQSLGLPMGFGG-P-HFGFLATKKAFVRQ  281 (438)
T ss_dssp             CSEEEEECTTTTCCCGGGC-S-CCEEEEECGGGGGG
T ss_pred             CCEEEECCcccCCCccCCC-C-CeeEEEEcHHHHHh
Confidence            9999999888     4555 9 99999999876654

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.69  E-value=4.5e-16  Score=146.32  Aligned_cols=157  Identities=11%  Similarity=0.044  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.|+.+|+++|++    .++||+|+|+|+++++.++.+.+|++|+ +..+|+..  ...++..|+++..++++..++
T Consensus        36 ~~~~l~~~la~~~~~~----~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~--~~~~~~~G~~~~~~~~~~~~~  109 (367)
T 3nyt_A           36 EVTELEDRLADFVGAK----YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVAT--AETVALLGAKPVYVDIDPRTY  109 (367)
T ss_dssp             HHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTTC
T ss_pred             HHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHH--HHHHHHcCCEEEEEecCCccC
Confidence            4568999999999984    3999999999999999988778899986 55566632  222455699999999886457


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC--cEEEEcc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP--DLVLCTL  282 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~--Dfl~~S~  282 (311)
                      .+|.++|++.++++     +++|. +...+|...|+++|.+ |+++|+++++|++|+. |.. .+....+.  |++++|+
T Consensus       110 ~~d~~~l~~~i~~~-----~~~v~-~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~-g~~-~~~~~~~~~~di~~~Sf  181 (367)
T 3nyt_A          110 NLDPQLLEAAITPR-----TKAII-PVSLYGQCADFDAINAIASKYGIPVIEDAAQSF-GAS-YKGKRSCNLSTVACTSF  181 (367)
T ss_dssp             SBCGGGTGGGCCTT-----EEEEC-CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTT-TCE-ETTEETTSSSSEEEEEC
T ss_pred             CcCHHHHHHhcCcC-----CcEEE-eeCCccChhhHHHHHHHHHHcCCEEEEECcccc-CCe-ECCeeccCCCCEEEEEC
Confidence            88999999998754     56665 2236999999999966 6999999999999998 765 33333333  9999995


Q ss_pred             --ccCcCCCCCceEEEEEe
Q 021539          283 --DNNTHAQPLKITCLLVR  299 (311)
Q Consensus       283 --HK~l~G~P~GiG~L~vr  299 (311)
                        || ++| +.|.|++++.
T Consensus       182 ~~~K-~l~-~~g~gg~~~~  198 (367)
T 3nyt_A          182 FPSA-PLG-CYGDGGAIFT  198 (367)
T ss_dssp             CTTS-SSC-CSSCCEEEEE
T ss_pred             CCCC-cCC-CcCceeEEEe
Confidence              89 888 5554555554

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.69  E-value=9.5e-17  Score=157.34  Aligned_cols=169  Identities=11%  Similarity=0.047  Sum_probs=128.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC----CCC---CEEE-EccCcChHHHHHHHHhCCcEEE
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF----FKG---NYYL-TIISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~----~~G---d~Il-s~~eh~~~~~~~la~~~G~~V~  196 (311)
                      ....+++++.+++++|++.+...++||+|+|+|+.+++.++..    .+|   +.|+ +...|.+  +...++..|++++
T Consensus       106 ~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~--~~~~~~~~G~~~~  183 (497)
T 3mc6_A          106 RKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAG--FDKAAYYFGMKLR  183 (497)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHH--HHHHHHHSCCEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHH--HHHHHHHcCCeEE
Confidence            3445689999999999972233599999999999988876521    023   6776 4444442  3344556799999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCcc---------
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFG---------  264 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G---------  264 (311)
                      .+|.+..++.+|.++|+++++++     +++|.++..  .+|.+.|+++|.+ |+++|+++++|++|+. +         
T Consensus       184 ~v~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~-~~~~f~~~~~  257 (497)
T 3mc6_A          184 HVELDPTTYQVDLGKVKKFINKN-----TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGS-FIVSFMEKAG  257 (497)
T ss_dssp             EECBCTTTCSBCTTTTGGGCCSS-----EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTH-HHHGGGTTTT
T ss_pred             EEecCcccCcCCHHHHHHHHhhC-----CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchh-hhhhhhhhhc
Confidence            99987546789999999998764     567766543  5999999999965 7999999999999873 2         


Q ss_pred             --Cc-ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          265 --ED-QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       265 --~~-pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                        +. ++++...++|++++|+|||++| |.|+|+++++++.
T Consensus       258 ~~~~~~~~~~~~g~d~~~~s~~K~l~~-~~~~g~~~~~~~~  297 (497)
T 3mc6_A          258 YKNLPLLDFRVPGVTSISCDTHKYGFA-PKGSSVIMYRNSD  297 (497)
T ss_dssp             CCSCCCCSTTSTTCCEEEEETTTTTCC-CSSCEEEECSSHH
T ss_pred             ccCCccccccCCCCcEEEECchhhcCC-CCCceeEEecCHH
Confidence              23 5777778899999999995456 8899999998743

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.69  E-value=1.1e-16  Score=152.01  Aligned_cols=162  Identities=10%  Similarity=-0.008  Sum_probs=116.8

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCC-CEEEEccCcChHHHHHHHHhC--CcEEEE
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKG-NYYLTIISEESDYIKGFAAQK--ESKVIA  197 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~G-d~Ils~~eh~~~~~~~la~~~--G~~V~~  197 (311)
                      .......+++|+.+|+++|+++ .++|+| |+|+|+|+++++.++ +++| +.+ +..+| ...+...+...  |.++..
T Consensus        74 ~~~~~~~~~~~~~la~~~g~~~-~~~i~~~t~g~t~al~~~~~~l-~~~gv~~v-~~~~~-~~~~~~~~~~~~~g~~~~~  149 (398)
T 2fyf_A           74 APVKNLVGRVRSGLAELFSLPD-GYEVILGNGGATAFWDAAAFGL-IDKRSLHL-TYGEF-SAKFASAVSKNPFVGEPII  149 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCT-TCEEEEEETCHHHHHHHHHHHT-CSSCEEEE-ECSHH-HHHHHHHHHHCTTSCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC-CceEEEeCCchhHHHHHHHHHh-cCCCeEEE-eCCHH-HHHHHHHHHHhCCCCceEE
Confidence            3344557899999999999973 346999 999999999999988 4566 333 33333 22222234444  788888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +|.++  +.+...    .++++     +++|++++.  .||.++|+++|.++  +|+++++|++|+. |..++++.  ++
T Consensus       150 v~~~~--g~~~~~----~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~~--~~~~vivD~a~~~-~~~~~~~~--~~  213 (398)
T 2fyf_A          150 ITSDP--GSAPEP----QTDPS-----VDVIAWAHNETSTGVAVAVRRPEGS--DDALVVIDATSGA-GGLPVDIA--ET  213 (398)
T ss_dssp             EECCT--TCCCCC----CCCTT-----CSEEEEESEETTTTEECCCCCCTTC--C-CEEEEECTTTT-TTSCCCGG--GC
T ss_pred             EecCC--CCCCCc----cccCC-----CCEEEEeCcCCCcceecchHHhhhh--cCCeEEEEecccc-CCcccCcc--cC
Confidence            98863  332211    13332     567776654  69999999998765  8999999999999 99998875  48


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |++++|+|| ++|.|.|+|+++++++..+
T Consensus       214 di~~~s~sK-~~~~~gg~g~l~~~~~~~~  241 (398)
T 2fyf_A          214 DAYYFAPQK-NFASDGGLWLAIMSPAALS  241 (398)
T ss_dssp             SEEEECTTS-TTCSCSSEEEEEECHHHHH
T ss_pred             cEEEEecCc-ccCCCCceEEEEECHHHHH
Confidence            999999999 8884547999999876543

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.69  E-value=3.1e-16  Score=151.85  Aligned_cols=161  Identities=11%  Similarity=-0.040  Sum_probs=120.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+++|+++|++   +.|+|+ ++|+|+++++.++ +++|++|+ +..+|+..  .+..+++..|+++..
T Consensus        53 ~~~~~~~~~~l~~~la~~~g~~---~~v~~~-sGt~A~~~~l~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~  127 (421)
T 2ctz_A           53 SRIMNPTVDVLEKRLAALEGGK---AALATA-SGHAAQFLALTTL-AQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRF  127 (421)
T ss_dssp             BTTBCHHHHHHHHHHHHHHTCS---EEEEES-SHHHHHHHHHHHH-CCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred             cCCCChHHHHHHHHHHHHhCCC---ceEEec-CHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence            3444556789999999999985   235554 5599999999887 57899986 44566633  233334667999988


Q ss_pred             E-eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccc-cCccCcccCCCC
Q 021539          198 A-PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATG-LVFGEDQLALAL  272 (311)
Q Consensus       198 v-p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQ-sv~G~~pldl~~  272 (311)
                      + +.+      +.++|+++++++     +++|.+.+.  .+|.++|+++|.+ ||++|+++++|++| +. |... +.-.
T Consensus       128 ~~~~~------d~~~l~~~i~~~-----~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~-g~~~-~~~~  194 (421)
T 2ctz_A          128 TSREE------RPEEFLALTDEK-----TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMG-GYLL-RPLA  194 (421)
T ss_dssp             CCTTC------CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGG-GTSC-CGGG
T ss_pred             ECCCC------CHHHHHHhhccC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccc-cccC-Cccc
Confidence            8 653      678899998764     678877654  5999999999966 69999999999999 88 8522 2224


Q ss_pred             CCCcEEEEccccCcCCCCCc-eEEEEEeC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK-ITCLLVRR  300 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G-iG~L~vr~  300 (311)
                      +++|++++|+|| ++|+|.+ +|++++++
T Consensus       195 ~~~Di~~~s~~K-~l~~~g~~~G~~~~~~  222 (421)
T 2ctz_A          195 WGAALVTHSLTK-WVGGHGAVIAGAIVDG  222 (421)
T ss_dssp             GTCSEEEEETTT-TTTCSSCCCCEEEEEC
T ss_pred             cCCeEEEECCcc-cccCCCCcEEEEEEec
Confidence            679999999999 6664653 78888863

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.67  E-value=4e-15  Score=141.78  Aligned_cols=164  Identities=9%  Similarity=-0.034  Sum_probs=125.1

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+.+++++|++  +  ++|++|+|+|+++++.++ +++|++|+ ...+|+.  ..++.+++..|.++..
T Consensus        59 ~~~~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a~~~~l~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~  133 (398)
T 2rfv_A           59 TRLGNPTTDALEKKLAVLERGE--A--GLATASGISAITTTLLTL-CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRF  133 (398)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEE
T ss_pred             eCCCChHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEE
Confidence            4555667789999999999985  2  666667789999998887 46889886 4455553  2333344667999998


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      +|.+      +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|.+|+. |..+..+ .++
T Consensus       134 v~~~------d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~-~~~  200 (398)
T 2rfv_A          134 VDAA------KPEEIRAAMRPE-----TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMS-PYCQQPL-QLG  200 (398)
T ss_dssp             ECTT------SHHHHHHHCCTT-----EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTC-TTTCCGG-GGT
T ss_pred             eCCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence            8874      578898888754     567776543  5899999999976 6999999999999998 7654333 357


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +|++++|+|| ++|+|.+  .|+++++++..
T Consensus       201 ~di~~~s~sK-~~~~~g~~~~G~~~~~~~~~  230 (398)
T 2rfv_A          201 ADIVVHSVTK-YINGHGDVIGGIIVGKQEFI  230 (398)
T ss_dssp             CSEEEEETTT-TTTCSSCCCCEEEEECHHHH
T ss_pred             CcEEEEeCcc-cccCCCCceEEEEEECHHHH
Confidence            9999999999 6655866  59999887654

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.67  E-value=1.6e-15  Score=143.48  Aligned_cols=158  Identities=13%  Similarity=0.018  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC------CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY------PFFKGNYYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~------~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ...++.|+.+|+++|++    .++||+|+|+|+++++.++      .+.+|++|+ +..+|++. . ..++..|+++..+
T Consensus        34 ~~~~~l~~~la~~~~~~----~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~-~-~~~~~~g~~~~~~  107 (390)
T 3b8x_A           34 EYVKQYETQFAKTFGSK----YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTT-Y-YPLQQYGLRVKFV  107 (390)
T ss_dssp             HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHH-H-HHHHHTTCEEEEE
T ss_pred             hHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHH-H-HHHHHcCCEEEEE
Confidence            45678999999999984    3899999999999999988      467889886 55666632 2 2234569999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC--
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP--  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~--  275 (311)
                      |++..++.+|.++|++.++++     +++|.++. .+|...|+++|.+ |+++|+++++|++|+. |..+ +....++  
T Consensus       108 ~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~-~~g~~~~~~~i~~l~~~~~~~li~D~a~~~-g~~~-~~~~~g~~~  179 (390)
T 3b8x_A          108 DIDINTLNIDIESLKEAVTDS-----TKAILTVN-LLGNPNNFDEINKIIGGRDIILLEDNCESM-GATF-NNKCAGTFG  179 (390)
T ss_dssp             CBCTTTCSBCHHHHHHHCCTT-----EEEEEEEC-GGGCCCCHHHHHHHHTTSCCEEEEECTTCT-TCEE-TTEETTSSS
T ss_pred             ecCccccCcCHHHHHHHhCcC-----CeEEEEEC-CccChhhHHHHHHHHHHcCCEEEEECcCcc-cCEE-CCccccccc
Confidence            987644789999999998754     57777653 5899999999976 6999999999999999 8776 6555554  


Q ss_pred             cEEEEc---cccCcCCCCCceEEEEEeC
Q 021539          276 DLVLCT---LDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S---~HK~l~G~P~GiG~L~vr~  300 (311)
                      |+.+||   +|| +.+ |.| |+++.++
T Consensus       180 ~~~~~s~~~~k~-~~~-g~g-G~~~~~~  204 (390)
T 3b8x_A          180 LMGTFSSFYSNH-IAT-MEG-GCIVTDD  204 (390)
T ss_dssp             SEEEEECCTTSS-SCS-SSC-EEEEESC
T ss_pred             ceEEEEccCCCC-Ccc-CCc-eEEEeCC
Confidence            777755   577 766 667 8888876

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.67  E-value=4e-15  Score=142.21  Aligned_cols=162  Identities=9%  Similarity=-0.020  Sum_probs=125.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+.+|+++|++  +  +++++|+|+|+++++.++ +++|++|+ +...|+.  ..+..+++..|+++..
T Consensus        54 ~~~~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~ai~~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~  128 (389)
T 3acz_A           54 SRLGNPTVEQFEEMVCSIEGAA--G--SAAFGSGMGAISSSTLAF-LQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDL  128 (389)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHTTT-CCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCCChHHHHHHHHHHHHhCCC--e--EEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEE
Confidence            5555666789999999999985  2  667777889999999987 57899886 4455553  2344446677999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC--cccCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE--DQLALAL  272 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~--~pldl~~  272 (311)
                      +|..      +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|.+|+. +.  .+++   
T Consensus       129 v~~~------d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~-~~~~~~~~---  193 (389)
T 3acz_A          129 IDTS------DVEKVKAAWKPN-----TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTS-PCFLKPLE---  193 (389)
T ss_dssp             ECTT------CHHHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC-TTTCCGGG---
T ss_pred             ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-ccccCccc---
Confidence            8863      678898888764     577776543  5999999999976 6999999999999987 65  3554   


Q ss_pred             CCCcEEEEccccCcCCCCCc--eEEEEEeC-CCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRR-KSF  303 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~-~~~  303 (311)
                      +++|++++|+|| ++|+|.+  .|+++.++ ++.
T Consensus       194 ~~~di~~~S~sK-~~~~~~~~~~G~v~~~~~~~~  226 (389)
T 3acz_A          194 LGADIALHSVSK-YINGHGDVIGGVSSAKTAEDI  226 (389)
T ss_dssp             TTCSEEEEETTT-TTTCSSCCCCEEEEESSHHHH
T ss_pred             cCCeEEEECChh-hccCCCCceeEEEEECcHHHH
Confidence            579999999999 6655866  59999887 543

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.66  E-value=4.3e-16  Score=153.68  Aligned_cols=180  Identities=11%  Similarity=-0.032  Sum_probs=124.8

Q ss_pred             CCcc-hhhhhHHHHHHHHHHHHHcCCCCCC--------CeEEEeCCHHHHHHHHHhcCC-----------C-------CC
Q 021539          117 TSFK-GNFISIPEIQARNRALKHCGLSEDE--------YLVLFVPNYKEAMLMIGESYP-----------F-------FK  169 (311)
Q Consensus       117 ss~~-G~~~~~~le~aR~~IA~~Lga~~de--------y~VvFTsnaTealnlv~~s~~-----------~-------~~  169 (311)
                      .+|. +.......+++.+.+++++|.+.+.        ...+||+|+|+|+.+.+....           +       .+
T Consensus       108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~  187 (481)
T 4e1o_A          108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA  187 (481)
T ss_dssp             SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred             CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence            3443 3444455567888999999996431        158999999999876544321           0       13


Q ss_pred             CCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCC-CCceEEEEecc--cccchhcHHHHH
Q 021539          170 GNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKY-TPKGLFSYPVV--VNGTRYSMHWIS  245 (311)
Q Consensus       170 Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~-~~t~LVs~~~~--~tG~i~Pi~~I~  245 (311)
                      +..|+ +...|.+  +...++..|.+++.+|.++ ++++|+++|+++|+++... ..+.+|++++.  .+|.+.|+++|.
T Consensus       188 ~~~v~~s~~~H~s--~~~~~~~~g~~~~~v~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~  264 (481)
T 4e1o_A          188 RLVAYASDQAHSS--VEKAGLISLVKMKFLPVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELG  264 (481)
T ss_dssp             TEEEEEETTSCHH--HHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHH
T ss_pred             CeEEEEcCcchHH--HHHHHHhCCCceEEEEcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHH
Confidence            44565 5555553  2233334589999999975 7899999999999754211 11345665554  589999999997


Q ss_pred             H-HHHCCcEEEecccccCccCcccC-----CCC-CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          246 E-AHRNAWHVLLDATGLVFGEDQLA-----LAL-HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       246 ~-a~~~g~~vlvDAaQsv~G~~pld-----l~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      + |+++|+++||||+++. +....+     +.. ..+|++++++|| +++.|.|+|+|+++++
T Consensus       265 ~la~~~~~~lhvDaA~g~-~~~~~~~~~~~~~gi~~aDsi~~~~hK-~l~~p~g~g~l~~~~~  325 (481)
T 4e1o_A          265 PICAREGLWLHIDAAYAG-TAFLCPEFRGFLKGIEYADSFTFNPSK-WMMVHFDCTGFWVKDK  325 (481)
T ss_dssp             HHHHHHTCEEEEECTTGG-GGGGSGGGGGGGTTGGGCSEEEECHHH-HSSCCSSCEEEEESBH
T ss_pred             HHHHHcCCeEEeehhhHH-HHHhChhhHHHhcCcccCCEEEEChHH-hcCCCCceEEEEEeCH
Confidence            6 6999999999999987 643221     111 135999999999 5555999999999874

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.66  E-value=8.9e-16  Score=146.75  Aligned_cols=163  Identities=11%  Similarity=-0.041  Sum_probs=123.3

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+.+|+++|++  +  .++++|+|+|+++++.++ +.+|++|+ +..+|+.  ..++.+++..|+++..
T Consensus        60 ~r~~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a~~~~l~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~  134 (398)
T 1gc0_A           60 SRISNPTLNLLEARMASLEGGE--A--GLALASGMGAITSTLWTL-LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH  134 (398)
T ss_dssp             ---CCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred             cCCCChHHHHHHHHHHHHhCCC--c--EEEECCHHHHHHHHHHHH-hcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            5556667789999999999985  2  555666689999999887 46889886 5556663  2333334567999988


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|++|+. |....++ .++
T Consensus       135 ~~~~------d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~-~~~~~~~-~~~  201 (398)
T 1gc0_A          135 VDMA------DLQALEAAMTPA-----TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCT-PYLQRPL-ELG  201 (398)
T ss_dssp             ECTT------CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTH-HHHCCGG-GGT
T ss_pred             ECCC------CHHHHHHhcCCC-----CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence            8763      578898888754     577777543  5899999999976 6999999999999998 8765554 368


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +|++++|+|| ++|+|.+  .|+++.+++.
T Consensus       202 ~d~~~~S~sK-~~~~~~~~~~G~l~~~~~~  230 (398)
T 1gc0_A          202 ADLVVHSATK-YLSGHGDITAGIVVGSQAL  230 (398)
T ss_dssp             CSEEEEETTT-TTTCSSSCCCEEEEECHHH
T ss_pred             ceEEEECCcc-ccCCCCCCeEEEEEEChHH
Confidence            9999999999 6765765  5999887654

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.66  E-value=1.5e-15  Score=140.73  Aligned_cols=162  Identities=12%  Similarity=0.021  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.|+.+|+++|+++++  |+||+|+|+|+++++.++ ..+||.|+ ....|+.  +...++..|.++..+|.+. ++
T Consensus        52 ~~~~l~~~la~~~~~~~~~--i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~-~~  125 (354)
T 3ly1_A           52 EILMLGNKLAAHHQVEAPS--ILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGD--GEHFAKIAGMKVTKVKMLD-NW  125 (354)
T ss_dssp             HHHHHHHHHHHHTTSCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTH--HHHHHHHTTCEEEEECCCT-TS
T ss_pred             chHHHHHHHHHHhCCChHH--EEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchH--HHHHHHHcCCEEEEecCCC-CC
Confidence            4568999999999997654  999999999999999987 46889886 3444442  2334556799999999885 57


Q ss_pred             ccCHHHHHhhhh--ccCCCCCceEEEEecc--cccchhcHHHHHHH-HH--CCcEEEecccccCccCccc---C----CC
Q 021539          206 RIKGSQLSQNFR--RKCKYTPKGLFSYPVV--VNGTRYSMHWISEA-HR--NAWHVLLDATGLVFGEDQL---A----LA  271 (311)
Q Consensus       206 ~id~~~L~~~l~--~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a-~~--~g~~vlvDAaQsv~G~~pl---d----l~  271 (311)
                      .++.++|++.++  ++     +++|.++..  .+|.++|++++.++ +.  +|+++++|.+|+. ....-   .    +.
T Consensus       126 ~~d~~~l~~~l~~~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~  199 (354)
T 3ly1_A          126 AFDIEGLKAAVAAYSG-----PSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAE-FVNDPRFRSISPMIT  199 (354)
T ss_dssp             CCCHHHHHHHHHTCSS-----CEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGG-GCCCTTCCCSHHHHH
T ss_pred             CCCHHHHHHHhccCCC-----CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHH-hccccccCCHHHHhh
Confidence            889999999998  43     567766533  59999999998663 55  8999999999985 32211   1    12


Q ss_pred             CC-CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          272 LH-RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       272 ~l-~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .. +.++++.|++| .+| +.|  +|+++.++++
T Consensus       200 ~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~  231 (354)
T 3ly1_A          200 QGAENIILLKTFSK-IHA-MAGMRVGYAVAHPTV  231 (354)
T ss_dssp             TTCSSEEEEEESSS-TTC-CGGGCCEEEECCHHH
T ss_pred             hcCCCEEEEeeChh-hcc-ChhhhheeeecCHHH
Confidence            23 56799999999 777 334  7999886644

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.66  E-value=2.6e-16  Score=157.33  Aligned_cols=171  Identities=13%  Similarity=0.073  Sum_probs=111.6

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH----HHHH--HHHhC
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD----YIKG--FAAQK  191 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~----~~~~--la~~~  191 (311)
                      |......+ +.+|+++++++|++.++. ..+|++|+|+|++.++.++ .++||+|+ ...+|...    .+..  .....
T Consensus        94 G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al-~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~  172 (490)
T 2a7v_A           94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISAT  172 (490)
T ss_dssp             ----CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-CCSCEECCC-----------------------
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHH-cCCCCEecccCccccccccchhhhcchhHHHc
Confidence            44433344 489999999999976543 3577878999999998887 57899986 34444311    1100  01112


Q ss_pred             Cc--EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc--
Q 021539          192 ES--KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--  266 (311)
Q Consensus       192 G~--~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--  266 (311)
                      |.  ++..++++..++.+|.++|++.+++.    +++++.+....+|...|+++|.+ |+++|+++++|++|+. |..  
T Consensus       173 g~~~~~~~~~vd~~~~~iD~d~le~~l~~~----~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~-glv~~  247 (490)
T 2a7v_A          173 SIFFESMPYKLNPKTGLIDYNQLALTARLF----RPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHIS-GLVAA  247 (490)
T ss_dssp             --------CCBCTTTCSBCHHHHHHHHHHH----CCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGH-HHHHT
T ss_pred             CCeEEEEecccccccCCcCHHHHHHHHhhc----CCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEcccccc-ccccC
Confidence            43  33344455446889999999998742    14577655445788899999976 6999999999999986 533  


Q ss_pred             ---ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          267 ---QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       267 ---pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                         +..+.  ++|++++|+||++.| |.| |+++.+++
T Consensus       248 g~~~~~~~--~aDiv~~S~hK~l~G-p~G-G~i~~~~~  281 (490)
T 2a7v_A          248 KVIPSPFK--HADIVTTTTHKTLRG-ARS-GLIFYRKG  281 (490)
T ss_dssp             TSSCCGGG--TCSEEEEESSGGGCS-CSC-EEEEEECS
T ss_pred             CcCCCCCC--CCCEEEECCcccCcc-ccc-hheeeccc
Confidence               33332  689999999995445 988 99998875

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.65  E-value=1.4e-15  Score=141.85  Aligned_cols=163  Identities=12%  Similarity=0.057  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .++.|+.+|+++|+++++  |+||+|+|+|+++++.++ +++|++|++ ...|+.  +...++..|+++..+|.++ ++.
T Consensus        69 ~~~lr~~la~~~~~~~~~--v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~-~~~  142 (363)
T 3ffh_A           69 ASSLRKEVADFYQLEEEE--LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQ--YRQNALIEGAEVREIPLLQ-DGE  142 (363)
T ss_dssp             CHHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHH--HHHHHHHHTCEEEEEECCT-TSC
T ss_pred             hHHHHHHHHHHhCCChhh--EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHH--HHHHHHHcCCEEEEecCCC-CCC
Confidence            468999999999997654  999999999999999987 578898863 344432  3334455699999999986 678


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEecccccCc--cC--cccCC-CCCCCc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGLVF--GE--DQLAL-ALHRPD  276 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQsv~--G~--~pldl-~~l~~D  276 (311)
                      +|.++|++.++++     +++|.++..  .+|.++|++++.+ ++..  |+++++|.+|+..  |.  ..+.. ...+-+
T Consensus       143 ~d~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  217 (363)
T 3ffh_A          143 HDLEGMLNAIDEK-----TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNL  217 (363)
T ss_dssp             CCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTE
T ss_pred             cCHHHHHHhcccC-----CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCE
Confidence            9999999999764     567766533  6999999999966 4555  9999999999931  11  11111 123445


Q ss_pred             EEEEccccCcCCCCCce--EEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLKI--TCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~Gi--G~L~vr~~~~  303 (311)
                      +++.|++| .+| +.|+  |++++++++.
T Consensus       218 i~~~s~sK-~~g-~~G~r~G~~~~~~~~~  244 (363)
T 3ffh_A          218 IITRTFSK-IYG-LASARVGYGIADKEII  244 (363)
T ss_dssp             EEEEESSS-TTC-CSSCCCEEEEECHHHH
T ss_pred             EEEeechh-hhc-CchhceeeeecCHHHH
Confidence            88889999 888 5677  9999976553

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.65  E-value=2.8e-15  Score=140.89  Aligned_cols=158  Identities=8%  Similarity=-0.004  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    .++||+|+|+|+++++.++.+.+|+.|+ ...+|+..  ...++..|++++.+|.+..+
T Consensus        39 ~~~~~l~~~la~~~~~~----~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~  112 (393)
T 1mdo_A           39 PKNQELEAAFCRLTGNQ----YAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVST--LNMIVLLGANPVMVDVDRDT  112 (393)
T ss_dssp             HHHHHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHH--HHHHHHTTCEEEEECBCTTT
T ss_pred             hHHHHHHHHHHHHhCCC----cEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhH--HHHHHHCCCEEEEEeccCCc
Confidence            34568999999999984    3999999999999999998667899886 44555532  23345679999999987544


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC-CcEEEEcc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR-PDLVLCTL  282 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~-~Dfl~~S~  282 (311)
                      +.++.++|++.++++     +++|.+.. .+|.+.|+++|.+ |+++|+++++|++|+. |... +...++ .|++++|+
T Consensus       113 ~~~d~~~l~~~l~~~-----~~~v~~~~-~~G~~~~~~~i~~l~~~~~~~li~D~a~~~-g~~~-~~~~~~~~d~~~~S~  184 (393)
T 1mdo_A          113 LMVTPEHIEAAITPQ-----TKAIIPVH-YAGAPADLDAIYALGERYGIPVIEDAAHAT-GTSY-KGRHIGARGTAIFSF  184 (393)
T ss_dssp             CCBCHHHHHHHCCTT-----EEEECCBC-GGGCCCCHHHHHHHHHHHTCCBCEECTTCT-TCEE-TTEETTSSSEEEEEC
T ss_pred             CCCCHHHHHHhcCCC-----ceEEEEeC-CCCCcCCHHHHHHHHHHcCCeEEEECcccc-CCeE-CCeecCCCCeEEEeC
Confidence            678999999998753     56776543 5999999999966 6999999999999998 7543 223345 89999999


Q ss_pred             c--cCcCCCCCceEEEEEe
Q 021539          283 D--NNTHAQPLKITCLLVR  299 (311)
Q Consensus       283 H--K~l~G~P~GiG~L~vr  299 (311)
                      |  | +++++ ..|+++.+
T Consensus       185 ~k~K-~l~~~-~~g~~~~~  201 (393)
T 1mdo_A          185 HAIK-NITCA-EGGIVVTD  201 (393)
T ss_dssp             CTTS-SSCSS-SCEEEEES
T ss_pred             CCCC-ccccc-cceEEEeC
Confidence            9  9 55523 45666664

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.65  E-value=4.3e-15  Score=141.42  Aligned_cols=158  Identities=8%  Similarity=-0.031  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    +++||+|+|+|+++++.++.+.+|+.|+ ....|+. .+ ..++..|+++..+|.+..+
T Consensus        63 ~~~~~l~~~la~~~~~~----~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~  136 (399)
T 2oga_A           63 PELEGFEAEFAAYCETD----HAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIA-SW-LAVSATGATPVPVEPHEDH  136 (399)
T ss_dssp             HHHHHHHHHHHHHTTSS----EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH-HH-HHHHHTTCEEEEECBCSSS
T ss_pred             hhHHHHHHHHHHHHCCC----eEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHH-HH-HHHHHCCCEEEEEecCCCC
Confidence            34568999999999984    3889999999999999998667889886 4455553 22 3345579999999987534


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCT  281 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S  281 (311)
                      +.++.++|++.++++     +++|.+. +.+|.+.|+++|.+ |+++|+++++|++|+. |.. .+...++  +|++++|
T Consensus       137 ~~~d~~~l~~~i~~~-----~~~v~~~-n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~-~~~~~~~~~~di~~~S  208 (399)
T 2oga_A          137 PTLDPLLVEKAITPR-----TRALLPV-HLYGHPADMDALRELADRHGLHIVEDAAQAH-GAR-YRGRRIGAGSSVAAFS  208 (399)
T ss_dssp             SSBCHHHHHHHCCTT-----EEEECCB-CGGGCCCCHHHHHHHHHHHTCEECEECTTCT-TCE-ETTEETTCTTCEEEEE
T ss_pred             CCcCHHHHHHhcCCC-----CeEEEEe-CCcCCccCHHHHHHHHHHcCCEEEEECcccc-cCc-cCCeecccccCEEEEe
Confidence            678999999998754     5666543 36999999999966 6999999999999998 854 2443344  7999999


Q ss_pred             cc--cCcCCCCCc-eEEEEEe
Q 021539          282 LD--NNTHAQPLK-ITCLLVR  299 (311)
Q Consensus       282 ~H--K~l~G~P~G-iG~L~vr  299 (311)
                      +|  | ++| |.| .|+++.+
T Consensus       209 ~~~sK-~~~-~~G~~g~~~~~  227 (399)
T 2oga_A          209 FYPGK-NLG-CFGDGGAVVTG  227 (399)
T ss_dssp             CCTTS-SSC-CSSCCEEEEES
T ss_pred             CCCCc-cCC-cCCceEEEEeC
Confidence            96  9 888 545 4555554

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.65  E-value=3.6e-15  Score=142.55  Aligned_cols=157  Identities=10%  Similarity=0.009  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++.|+.+++++|++  +  ++|++|+|+|+++++.++.+.+|++|+ ...+|+.. . ..++..|++++.+|.+..++
T Consensus        43 l~~~l~~~la~~~g~~--~--~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~-~-~~~~~~g~~~~~~~~~~~~~  116 (418)
T 2c81_A           43 MERKFAKAFADFNGVP--Y--CVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIAT-A-TAVLNVNALPVFVDVEADTY  116 (418)
T ss_dssp             HHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH-H-HHHHHTTCEEEEECBCTTTC
T ss_pred             HHHHHHHHHHHHhCCC--c--EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhH-H-HHHHHcCCEEEEEecCCCCC
Confidence            4578999999999985  2  889999999999999998667899886 55566632 2 23445799999999875467


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---CCCC-CCcEEEE
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---LALH-RPDLVLC  280 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---l~~l-~~Dfl~~  280 (311)
                      .+|.++|++.++++     +++|.+.+ .+|...|+++|.+ |+++|+++++|++|+. |.. ++   +..+ ++++.+|
T Consensus       117 ~~d~~~l~~~i~~~-----~~~v~~~~-~~G~~~~~~~i~~~~~~~~~~li~D~a~~~-~~~-~~~~~~~~~~~~~~~s~  188 (418)
T 2c81_A          117 CIDPQLIKSAITDK-----TKAIIPVH-LFGSMANMDEINEIAQEHNLFVIEDCAQSH-GSV-WNNQRAGTIGDIGAFSC  188 (418)
T ss_dssp             SBCHHHHGGGCCTT-----EEEECCBC-CTTCCCCHHHHHHHHHHTTCEEEEECTTCT-TCE-ETTEETTSSSSEEEEEC
T ss_pred             CcCHHHHHHhhCCC-----CeEEEEeC-CcCCcccHHHHHHHHHHCCCEEEEECcccc-cCc-cCCEecccccceEEEec
Confidence            78999999998754     56776543 5999999999966 6999999999999999 863 22   2211 2455555


Q ss_pred             ccccCcCCCCCceEEEEEe
Q 021539          281 TLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr  299 (311)
                      |+|| ++| +...|+++.+
T Consensus       189 s~~K-~~~-~g~~g~~~~~  205 (418)
T 2c81_A          189 QQGK-VLT-AGEGGIIVTK  205 (418)
T ss_dssp             CTTS-SSC-SSSCEEEEES
T ss_pred             cCCc-ccC-CCCeEEEEEC
Confidence            5599 888 5234555553

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.64  E-value=1.1e-15  Score=142.70  Aligned_cols=160  Identities=13%  Similarity=0.052  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.|+.+|+++|+++++  |+||+|+|+|+++++.++ +.+|+.|++. ..|+ . +...++..|.++..+|.+..++ +
T Consensus        68 ~~lr~~la~~~~~~~~~--v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~~~-~  141 (365)
T 3get_A           68 IELKSTLAQKYKVQNEN--IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFA-M-YEIYAKQCGAKCYKTQSITHNL-D  141 (365)
T ss_dssp             HHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCT-H-HHHHHHHHTCEEEECSSSSCCH-H
T ss_pred             HHHHHHHHHHhCCCcce--EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChH-H-HHHHHHHcCCEEEEEecCCCCC-C
Confidence            37899999999997654  999999999999999887 5789998743 3444 2 2233455699999999722367 8


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HH--HCCcEEEeccccc------CccCcccCCC----C
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AH--RNAWHVLLDATGL------VFGEDQLALA----L  272 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~--~~g~~vlvDAaQs------v~G~~pldl~----~  272 (311)
                      +.++|++.++++     +++|.++..  .||.++|++++.+ ++  ++|+++++|.+|+      . +..+.+..    .
T Consensus       142 d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~  215 (365)
T 3get_A          142 EFKKLYETHKDE-----IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKD-SKKHLEPCELIKE  215 (365)
T ss_dssp             HHHHHHHHTTTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHC-GGGCCCHHHHHHH
T ss_pred             CHHHHHHHhCCC-----CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccC-CcccccHhHHhcc
Confidence            999999999754     567776433  6999999999866 45  5699999999999      4 44444432    2


Q ss_pred             CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .+.++++.|++| .+| +.|  +|+++.++++
T Consensus       216 ~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~  245 (365)
T 3get_A          216 FDNVLYLGTFSK-LYG-LGGLRIGYGIANANI  245 (365)
T ss_dssp             CTTEEEEEESSS-TTS-CTTTCCEEEEECHHH
T ss_pred             CCCEEEEeecch-Hhc-CcchheEEEEcCHHH
Confidence            367899999999 777 335  8999986554

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.64  E-value=8.7e-16  Score=150.83  Aligned_cols=168  Identities=13%  Similarity=-0.028  Sum_probs=126.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCC-----EEE-EccCcChHHHHHHHHhCCcEE
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGN-----YYL-TIISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd-----~Il-s~~eh~~~~~~~la~~~G~~V  195 (311)
                      ...+++.++.+++++|++.   .++||+|+|+|+.+++.   .+...+||     +|+ +...|.+..  ..++..|+++
T Consensus       106 ~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~--~~~~~~G~~v  180 (474)
T 1wyu_B          106 LRLMWELGEYLKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNP--ATASMAGYQV  180 (474)
T ss_dssp             HHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHH--HHHHHTTCEE
T ss_pred             HHHHHHHHHHHHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhH--HHHHHCCCEE
Confidence            4556789999999999963   37799999999886332   22123454     775 455565322  2345579999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch-hcHHHHHH-HHHCCcEEEecccccCccCc-ccCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR-YSMHWISE-AHRNAWHVLLDATGLVFGED-QLALA  271 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i-~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pldl~  271 (311)
                      +.+|.+. ++.+|.++|++.++++     +++|.++.. .+|.+ .|+++|.+ ||++|+++++|++|+. +.. .++..
T Consensus       181 v~v~~~~-~~~~d~~~L~~~i~~~-----t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~-~~~g~~~~~  253 (474)
T 1wyu_B          181 REIPSGP-EGEVDLEALKRELGPH-----VAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLN-AIMGWARPG  253 (474)
T ss_dssp             EEECBCT-TSSBCHHHHHHHCSTT-----EEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGG-GTTTTCCHH
T ss_pred             EEecCCC-CCCcCHHHHHHhhCCC-----ceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhh-hhccCCCcc
Confidence            9999875 7889999999999764     567666543 68988 79999976 6999999999999987 654 44555


Q ss_pred             CCCCcEEEEccccCcCCCCC-----ceEEEEEeCCCCcc
Q 021539          272 LHRPDLVLCTLDNNTHAQPL-----KITCLLVRRKSFDT  305 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~-----GiG~L~vr~~~~~~  305 (311)
                      .+++|++++|+|| +||.|.     |+|++++++++.+.
T Consensus       254 ~~g~di~~~s~~K-~~~~p~g~gG~~~G~~~~~~~l~~~  291 (474)
T 1wyu_B          254 DMGFDVVHLNLHK-TFTVPHGGGGPGSGPVGVKAHLAPY  291 (474)
T ss_dssp             HHTCSEEECCTTT-TTCCCCTTSCCCCCCEEECGGGGGG
T ss_pred             cCCCcEEEEeCcc-ccccCCCCCCCCeEEEEEcHHHHHh
Confidence            5689999999999 666585     69999999876543

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.64  E-value=5.9e-15  Score=138.07  Aligned_cols=167  Identities=10%  Similarity=0.056  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .....++.++.+++.+|.+.+...|+||+|+|+|+++++.++ +.+|+.|++. ..|+.  +...++..|.++..+|.++
T Consensus        64 ~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~  140 (391)
T 3dzz_A           64 PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNM--FYSVIEGNGRRVISSDLIY  140 (391)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHH--HHHHHHHTTCEEEECCCEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHH--HHHHHHHcCCEEEEeeeee
Confidence            445556778888888883322335999999999999999987 5789998744 34442  3334556799999998852


Q ss_pred             CCc--ccCHHHHHhhhhccCCCCCceEEEEecc--cccch---hcHHHHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          203 LDL--RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR---YSMHWISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       203 ~~g--~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i---~Pi~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      .++  .++.++|++.++..    ++++|.++..  .+|.+   .++++|.+ |+++|+++++|.+|+..   |+.+.++.
T Consensus       141 ~~~~~~~d~~~l~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~  216 (391)
T 3dzz_A          141 ENSKYSVNWADLEEKLATP----SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAF  216 (391)
T ss_dssp             ETTEEECCHHHHHHHHTST----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGG
T ss_pred             cCCceeecHHHHHHHHhcc----CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehh
Confidence            223  38999999999732    2567666543  69999   55666755 68999999999999841   33455565


Q ss_pred             CCC---Cc--EEEEccccCcCCCCCc--eEEEEEe
Q 021539          272 LHR---PD--LVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       272 ~l~---~D--fl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      .+.   +|  ++++|+|| .+| +.|  +|+++.+
T Consensus       217 ~~~~~~~d~~i~~~s~sK-~~g-~~G~r~G~~~~~  249 (391)
T 3dzz_A          217 TVDWDAKNWVVSLISPSK-TFN-LAALHAACAIIP  249 (391)
T ss_dssp             GSCTTTGGGEEEEECSHH-HHT-CTTTCCEEEECC
T ss_pred             hcCccccCcEEEEEeChh-hcc-ccchhheEEEEC
Confidence            544   67  99999999 776 334  8999887

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.63  E-value=4.9e-15  Score=136.20  Aligned_cols=158  Identities=16%  Similarity=0.154  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ...+.|+.+|+++|+++++  |+||+|+|+++++++.++   +|+.|+. ...|..  ....++..|+++..+|.++ ++
T Consensus        52 ~~~~lr~~la~~~~~~~~~--i~~t~G~~~~l~~~~~~~---~gd~vl~~~p~~~~--~~~~~~~~g~~~~~v~~~~-~~  123 (337)
T 3p1t_A           52 AEPRVMRKLAEHFSCPEDN--LMLVRGIDECFDRISAEF---SSMRFVTAWPGFDG--YRARIAVSGLRHFEIGLTD-DL  123 (337)
T ss_dssp             HHHHHHHHHHHHHTSCGGG--EEEESHHHHHHHHHHHHS---TTSEEEEESSSCSH--HHHHHTTSCCEEEEECBCT-TS
T ss_pred             chHHHHHHHHHHhCcCHHH--EEEeCCHHHHHHHHHHhc---CCCeEEEeCCCcHH--HHHHHHHcCCEEEEecCCC-CC
Confidence            4568999999999997654  999999999999999987   7888863 334442  2344566799999999875 56


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccCCCCCCCcEEEEc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLALALHRPDLVLCT  281 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pldl~~l~~Dfl~~S  281 (311)
                      .++.++|++..  +     ++++.++..  .||.++|++++.+ ++++++ +++|.+++-. +..+..+...+.++++.|
T Consensus       124 ~~d~~~l~~~~--~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S  195 (337)
T 3p1t_A          124 LLDPNDLAQVS--R-----DDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRS  195 (337)
T ss_dssp             SBCHHHHTTCC--T-----TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEE
T ss_pred             CCCHHHHHhhc--C-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEee
Confidence            78999887652  2     456666543  6999999999976 588887 5669988721 333444444567899999


Q ss_pred             cccCcCCCCCc--eEEEEEeCCC
Q 021539          282 LDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       282 ~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ++| +|| +.|  +|+++.+++.
T Consensus       196 ~sK-~~g-~~G~r~G~~~~~~~~  216 (337)
T 3p1t_A          196 FSK-SYG-LAGLRLGALFGPSEL  216 (337)
T ss_dssp             SSS-TTC-CTTTCCEEEECCHHH
T ss_pred             Cch-hcc-CcchheEEEEeCHHH
Confidence            999 887 445  5988877644

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.62  E-value=1.3e-14  Score=139.78  Aligned_cols=165  Identities=7%  Similarity=-0.061  Sum_probs=123.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.|+.+|+++|++  +  +++++|+++|+++++.++ +++||+|+ ....|+.  ..+...++..|+++..
T Consensus        57 ~~~~~~~~~~l~~~ia~~~g~~--~--~i~~~~g~~ai~~~~~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~  131 (404)
T 1e5e_A           57 TRLGNPTVSNLEGKIAFLEKTE--A--CVATSSGMGAIAATVLTI-LKAGDHLISDECLYGCTHALFEHALTKFGIQVDF  131 (404)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred             cCCcChHHHHHHHHHHHHhCCC--c--EEEeCChHHHHHHHHHHH-hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            3444555678999999999984  2  667777789999999887 46899886 4445542  2233345667999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH-CCcEEEecccccCccCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR-NAWHVLLDATGLVFGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~-~g~~vlvDAaQsv~G~~pldl~~l  273 (311)
                      +|.+      |.++|++.++++     +++|.+...  .+|.++|+++|.+ |++ +|+++++|.+|+. +.....+ .+
T Consensus       132 v~~~------d~~~l~~~i~~~-----t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~-~~~~~~~-~~  198 (404)
T 1e5e_A          132 INTA------IPGEVKKHMKPN-----TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS-PMITNPV-DF  198 (404)
T ss_dssp             ECTT------STTHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC-TTTCCGG-GG
T ss_pred             ECCC------CHHHHHHhcCCC-----CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch-hhhCCcc-cc
Confidence            8874      467888888754     567766533  6999999999966 699 9999999999998 7632223 35


Q ss_pred             CCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          274 RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      ++|+++.|+|| +||+|.+  .|+++++++.++
T Consensus       199 ~~di~~~S~sK-~~~~~g~ri~G~~~~~~~~~~  230 (404)
T 1e5e_A          199 GVDVVVHSATK-YINGHTDVVAGLICGKADLLQ  230 (404)
T ss_dssp             TCSEEEEETTT-TTTCSSCCCCEEEEECHHHHH
T ss_pred             CCEEEEEcCcc-ccCCCCCCeEEEEEECHHHHH
Confidence            89999999999 6665865  699998876543

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.62  E-value=6.7e-15  Score=138.99  Aligned_cols=160  Identities=11%  Similarity=0.007  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    .++||+|+|+|+++++.++.+.+|+.|+ ...+|+..  ...++..|+++..++.+..+
T Consensus        56 ~~~~~l~~~la~~~~~~----~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~  129 (391)
T 3dr4_A           56 RFIVEFEKAFADYCGVK----HAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIAS--ANSVTYCGATPVLVDNDPRT  129 (391)
T ss_dssp             HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTT
T ss_pred             hHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHH--HHHHHHCCCEEEEEecCccc
Confidence            44678999999999985    3999999999999999988667899986 55566642  22345569999999987546


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC--CCC-CCcEEEE
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL--ALH-RPDLVLC  280 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl--~~l-~~Dfl~~  280 (311)
                      +.++.++|++.++++     +++|.+. +.+|.+.|+++|.+ |+++|+++++|++|+. |....+.  ..+ ++++++|
T Consensus       130 ~~~d~~~l~~~~~~~-----~~~v~~~-n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~-g~~~~~~~~~~~~di~~~S~  202 (391)
T 3dr4_A          130 FNLDAAKLEALITPR-----TKAIMPV-HLYGQICDMDPILEVARRHNLLVIEDAAEAV-GATYRGKKSGSLGDCATFSF  202 (391)
T ss_dssp             CSBCGGGSGGGCCTT-----EEEECCB-CGGGCCCCHHHHHHHHHHTTCEEEEECTTCT-TCEETTEETTSSSSEEEEEC
T ss_pred             cCcCHHHHHHhcCCC-----ceEEEEE-CCCCChhhHHHHHHHHHHcCCEEEEECcccc-cceECCeeecccCCEEEEEC
Confidence            788999999888754     5666543 36999999999966 6999999999999998 8765553  222 2444444


Q ss_pred             ccccCcCCCCCceEEEEEeC
Q 021539          281 TLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       281 S~HK~l~G~P~GiG~L~vr~  300 (311)
                      |.|| +++++ ..|+++.++
T Consensus       203 s~~K-~l~~g-~gg~~~~~~  220 (391)
T 3dr4_A          203 FGNA-IITTG-EGGMITTND  220 (391)
T ss_dssp             BTTS-SSCCB-SCEEEEESC
T ss_pred             CCCC-cCCcC-CeEEEEECC
Confidence            5889 66622 345555543

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.62  E-value=1.5e-15  Score=143.84  Aligned_cols=164  Identities=10%  Similarity=-0.028  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .+.|+.+|+++    |++.+..+|+||+|+|+|+++++.++ +.+|+.|+ ....|+.  +...++..|.++..+|.+..
T Consensus        81 ~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~~  157 (389)
T 1o4s_A           81 YELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMAL-LDPGDEVIVFSPVWVS--YIPQIILAGGTVNVVETFMS  157 (389)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHh-CCCCCEEEEcCCCchh--HHHHHHHcCCEEEEEecCCc
Confidence            46788888887    76322235999999999999999987 57889876 4455553  22334557999999998642


Q ss_pred             -CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccCCCC-
Q 021539          204 -DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLALAL-  272 (311)
Q Consensus       204 -~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~~-  272 (311)
                       +..++.++|++.++++     +++|.++..  .+|.++|   +++|.+ |+++|+++++|.+|+. +..   +.++.. 
T Consensus       158 ~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~g~~~~~~~~  231 (389)
T 1o4s_A          158 KNFQPSLEEVEGLLVGK-----TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDS-LVYTDEFTSILDV  231 (389)
T ss_dssp             GTTCCCHHHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-SBCSSCCCCHHHH
T ss_pred             cCCCCCHHHHHHhcccC-----ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCHhhc
Confidence             3467999999988754     466665433  5999988   667755 6899999999999997 543   223322 


Q ss_pred             ---CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 ---HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 ---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                         .+.|++++|+|| ++| +.|  +|++++++++.
T Consensus       232 ~~~~~~~i~~~s~sK-~~~-~~G~r~G~l~~~~~~~  265 (389)
T 1o4s_A          232 SEGFDRIVYINGFSK-SHS-MTGWRVGYLISSEKVA  265 (389)
T ss_dssp             CSSSTTEEEEEESTT-TTT-CGGGCCEEEECCHHHH
T ss_pred             CCCCCcEEEEeechh-hcC-CcccceEEEEeCHHHH
Confidence               468999999999 888 568  89999876543

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.62  E-value=7.4e-15  Score=141.69  Aligned_cols=155  Identities=13%  Similarity=0.054  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~vp~~~  202 (311)
                      ...++.|+.+|+++|++   +.|+|++| ++|+++++. + +++||+|+ ....|+.  ..+..+++..|+++..++.+ 
T Consensus        67 p~~~~l~~~la~~~g~~---~~i~~~sG-~~ai~~~~~-l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-  139 (403)
T 3cog_A           67 PTRNCLEKAVAALDGAK---YCLAFASG-LAATVTITH-L-LKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-  139 (403)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEESCH-HHHHHHHHT-T-SCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-
T ss_pred             chHHHHHHHHHHHhCCC---cEEEECCH-HHHHHHHHH-H-hCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-
Confidence            44568999999999985   24777766 699999988 6 67899986 4455553  22333445679999998874 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC-cEEEecccccCccCcccCCCCCCCcEE
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA-WHVLLDATGLVFGEDQLALALHRPDLV  278 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g-~~vlvDAaQsv~G~~pldl~~l~~Dfl  278 (311)
                           +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++| +++++|.+|+. +.....+. +++|++
T Consensus       140 -----d~~~l~~~i~~~-----t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~-~~~~~~~~-~~~div  207 (403)
T 3cog_A          140 -----KIKLLEAAITPE-----TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMS-PYFQRPLA-LGADIS  207 (403)
T ss_dssp             -----SHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTC-TTTCCTTT-TTCSEE
T ss_pred             -----CHHHHHHhcCcC-----CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcc-cccCCccc-cCCeEE
Confidence                 578898888754     577776533  6999999999976 69999 99999999998 75322332 589999


Q ss_pred             EEccccCcCCCCCce--EEEEEeC
Q 021539          279 LCTLDNNTHAQPLKI--TCLLVRR  300 (311)
Q Consensus       279 ~~S~HK~l~G~P~Gi--G~L~vr~  300 (311)
                      +.|+|| ++|+|.|+  |+++.++
T Consensus       208 ~~S~sK-~~~g~~~~~~G~v~~~~  230 (403)
T 3cog_A          208 MYSATK-YMNGHSDVVMGLVSVNC  230 (403)
T ss_dssp             EEETTT-TTTCSSCCCCEEEEECC
T ss_pred             EEcChh-hccCCCCCeEEEEEECc
Confidence            999999 66658774  9988863

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.62  E-value=1.3e-15  Score=148.92  Aligned_cols=159  Identities=12%  Similarity=0.006  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC--CCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE--TWLD  204 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~--~~~~  204 (311)
                      ++++|+.+|+ +|++   ..++||+|+|+|+++++.++ +++|+.|+.. ..|++. ... +...|+++.+++.  +. +
T Consensus        59 ~~~~~~~la~-~g~~---~~v~~~~G~t~a~~~~~~a~-~~~gd~Vlv~~~~h~s~-~~~-~~~~G~~~~~v~~~~~~-~  130 (446)
T 2x3l_A           59 ILKSMKQVEK-HSDY---DGYFLVNGTTSGILSVIQSF-SQKKGDILMARNVHKSV-LHA-LDISQQEGHFIETHQSP-L  130 (446)
T ss_dssp             HHHHHHHHCS-CTTE---EEEEESSHHHHHHHHHHHTT-TTSSSCEEECTTCCHHH-HHH-HHHHTCCEEECEEEECT-T
T ss_pred             HHHHHHHHHh-cCCC---ceEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCccHHH-HHH-HHHcCCeEEEEeCeecc-c
Confidence            4689999999 9985   35999999999999999987 5788988744 455532 221 2234888888877  43 2


Q ss_pred             ----cccCHHHHHhhhhccCCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccC----cccCCCCCC
Q 021539          205 ----LRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE----DQLALALHR  274 (311)
Q Consensus       205 ----g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~----~pldl~~l~  274 (311)
                          +.++.+.|   +.++     +++|.+++. .+|.+.|+++|.+ ||++|+++++|++|+. ..    .++++...+
T Consensus       131 ~~~~~~~d~~~l---~~~~-----~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g  201 (446)
T 2x3l_A          131 TNHYNKVNLSRL---NNDG-----HKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQ  201 (446)
T ss_dssp             TSSEEEEEC---------------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGT
T ss_pred             cCcCCCCCHHHH---cCCC-----ceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcC
Confidence                45677766   3332     456665543 6999999999966 7999999999999885 21    156666678


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|++++|+||+++| |.|+|+|+++++..+
T Consensus       202 ~Di~~~S~~K~l~~-~~g~g~l~~~~~~i~  230 (446)
T 2x3l_A          202 ADYVVQSFHKTLPA-LTMGSVLYIHKNAPY  230 (446)
T ss_dssp             CSEEEECHHHHSSS-CTTCEEEEEETTCTT
T ss_pred             CCEEEECCcccccc-ccccEEEEEcCCcCC
Confidence            99999999995555 889999999988764

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.62  E-value=6.3e-15  Score=141.02  Aligned_cols=157  Identities=11%  Similarity=-0.076  Sum_probs=114.1

Q ss_pred             HHHHHHHH-HHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRA-LKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~I-A~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      .++.|+.+ |+++|.. +  .++||+|+|+|+++++.++.+++||+|+ +..+|...  ...++..|+++++++++..++
T Consensus        38 ~~~l~~~~~a~~~g~~-~--~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~--~~~~~~~G~~~~~v~~~~~~~  112 (377)
T 3ju7_A           38 NQRFEQTIMSGFFQNR-G--AVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPAT--PLAAIWCGLEPYFIDISIDDW  112 (377)
T ss_dssp             HHHHHHHHHHHTSTTC-S--EEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHH--HHHHHHTTCEEEEECBCTTTC
T ss_pred             HHHHHHHHHHHHhCCC-C--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH--HHHHHHcCCEEEEEecCCccC
Confidence            45889999 9999932 3  3999999999999999987678999986 55566532  223455699999999875567


Q ss_pred             ccCHHHHHhhh-hccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC-----CCcEE
Q 021539          206 RIKGSQLSQNF-RRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH-----RPDLV  278 (311)
Q Consensus       206 ~id~~~L~~~l-~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l-----~~Dfl  278 (311)
                      .+|+++|++++ +++.   .+++|... ..+|...|+++|.+ |+ +|+++++|++|++ |.. .+....     +++++
T Consensus       113 ~~d~~~l~~~i~~~~~---~tk~v~~~-~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~-g~~-~~~~~~g~~~~d~~~~  185 (377)
T 3ju7_A          113 YMDKTVLWDKIEELKE---EVAIVVPY-ATFGSWMNLEEYEELEK-KGVPVVVDAAPGF-GLM-NGGMHYGQDFSGMIIY  185 (377)
T ss_dssp             SBCHHHHHHHHHHHGG---GEEEECCB-CGGGBCCCCHHHHHHHH-TTCCBEEECTTCT-TCE-ETTEETTTTCSSEEEE
T ss_pred             CcCHHHHHHHHhcCCC---CceEEEEE-CCCCCccCHHHHHHHHh-cCCEEEEECCCcc-CCe-ECCEeccCCCCcEEEE
Confidence            89999999988 4430   14666533 25899999999976 69 9999999999999 854 222222     24445


Q ss_pred             EEccccCcCCCCCceEEEEEe
Q 021539          279 LCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       279 ~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      +|+.|| .+| + |.|++++.
T Consensus       186 S~~~~K-~l~-~-g~gG~~~~  203 (377)
T 3ju7_A          186 SFHATK-PFG-I-GEGGLIYS  203 (377)
T ss_dssp             ECBTTS-SSC-C-BSCEEEEE
T ss_pred             ECCCCC-cCC-C-CCcEEEEE
Confidence            555789 777 4 55555543

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.62  E-value=2.2e-15  Score=142.51  Aligned_cols=157  Identities=15%  Similarity=0.037  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HHHH-HHhCCcEEEEEeCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IKGF-AAQKESKVIAAPETWL  203 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~~l-a~~~G~~V~~vp~~~~  203 (311)
                      .+.+|+.+++++|++++  +|+||+| |+|+.+++.++ +++||.|+ ...+|+...  ...+ ....++.+..++++ .
T Consensus        73 ~~~~~~~la~~~g~~~~--~i~~~sG-t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~  147 (417)
T 3n0l_A           73 ETLAIERCKKLFNCKFA--NVQPNSG-SQANQGVYAAL-INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-L  147 (417)
T ss_dssp             HHHHHHHHHHHHTCSEE--ECCCSSH-HHHHHHHHHHH-SCTTCEEEEECC----------------CCSEEEEECCC-T
T ss_pred             HHHHHHHHHHHhCCCCc--ceEeccH-HHHHHHHHHHh-cCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC-C
Confidence            34689999999999654  3777777 89999998887 67899986 445554211  1111 11235566667777 4


Q ss_pred             CcccCHHHHHhhhhc-cCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----ccCCCCCCCc
Q 021539          204 DLRIKGSQLSQNFRR-KCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----QLALALHRPD  276 (311)
Q Consensus       204 ~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----pldl~~l~~D  276 (311)
                      ++.+|.++|++.+++ +     +++|.+....+|++.|+++|.+ |+++|+++++|.+|+. |..     +.++.  .+|
T Consensus       148 ~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~~~~~~~~~--~~d  219 (417)
T 3n0l_A          148 DGRIDYEKVREIAKKEK-----PKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIA-GLVVAGEHPSPFP--YAH  219 (417)
T ss_dssp             TSSCCHHHHHHHHHHHC-----CSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHTTSSCCCTT--TCS
T ss_pred             CCCcCHHHHHHHHHhcC-----CeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccch-hhhhcccCCCccc--cce
Confidence            778999999999983 3     4566654434799999999976 6999999999999976 655     44443  579


Q ss_pred             EEEEccccCcCCCCCceEEEEEe
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      ++++|+||++ ++|.| |+++.+
T Consensus       220 i~~~s~sK~l-~g~~~-G~~~~~  240 (417)
T 3n0l_A          220 VVSSTTHKTL-RGPRG-GIIMTN  240 (417)
T ss_dssp             EEEEESSTTT-CSCSC-EEEEES
T ss_pred             EEEeeCcccc-CCCCe-eEEEEC
Confidence            9999999955 44875 888887

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.61  E-value=4.8e-15  Score=139.38  Aligned_cols=163  Identities=13%  Similarity=0.090  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHc----CCCCCCCe-EEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHC----GLSEDEYL-VLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~-VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.+|+++    |.+.+..+ |+||+|+|+|+++++.++ ..+|+.|+ ....|+..  ...++..|.++..+|.+.
T Consensus        66 ~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~  142 (389)
T 1gd9_A           66 LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF-LKDGEEVLIPTPAFVSY--APAVILAGGKPVEVPTYE  142 (389)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT-CCTTCEEEEEESCCTTH--HHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhH--HHHHHHCCCEEEEeccCC
Confidence            46888888888    85323336 999999999999999988 56889886 44556532  223344589999999864


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc----ccCCC
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED----QLALA  271 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~----pldl~  271 (311)
                      . +..++.++|++.++++     +++|.++..  .||.++|   +++|.+ |+++|+++++|.+|+. +..    +.++.
T Consensus       143 ~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~  216 (389)
T 1gd9_A          143 EDEFRLNVDELKKYVTDK-----TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEH-FIYDDARHYSIA  216 (389)
T ss_dssp             GGTTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGG
T ss_pred             ccCCCCCHHHHHHhcCcC-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhh-cccCCCCCCCHh
Confidence            2 3457999999998753     466665433  5999996   666655 6899999999999997 543    23333


Q ss_pred             C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .    .+.|+++.|+|| ++| +.|  +|++++++++
T Consensus       217 ~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~  251 (389)
T 1gd9_A          217 SLDGMFERTITVNGFSK-TFA-MTGWRLGFVAAPSWI  251 (389)
T ss_dssp             GSTTCGGGEEEEEESTT-TTT-CGGGCCEEEECCHHH
T ss_pred             hccCCCCCEEEEecChh-hcC-CcccceEEEEECHHH
Confidence            2    357999999999 888 557  6999987654

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.59  E-value=2.2e-14  Score=141.77  Aligned_cols=156  Identities=13%  Similarity=0.016  Sum_probs=119.6

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChH--HHHHHHHhCCcEEEEEe
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESD--YIKGFAAQKESKVIAAP  199 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~--~~~~la~~~G~~V~~vp  199 (311)
                      ......++.++.+++++|++    +++|++|+|+|+++++. + +++||+|+. ...|+..  .+..+++..|+++..+|
T Consensus       130 ~g~~~~~~l~~~la~~~g~~----~~i~~~sGt~al~~~l~-~-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  203 (464)
T 1ibj_A          130 SGNPTRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN  203 (464)
T ss_dssp             TCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHT-T-SCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHH-H-hCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            33345678999999999974    37888888999998886 3 478999864 4445422  22233455699998888


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc--ccCCCCCC
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--QLALALHR  274 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--pldl~~l~  274 (311)
                      .+      +.++|++.++++     +++|.+...  .+|.++|+++|.+ |+++|+++++|.+|+. |..  +++   ++
T Consensus       204 ~~------d~~~l~~~i~~~-----tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~-g~~~~~~~---~~  268 (464)
T 1ibj_A          204 TT------KLDEVAAAIGPQ-----TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMS-PVLSRPLE---LG  268 (464)
T ss_dssp             TT------SHHHHHHHCCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTC-TTTCCGGG---TT
T ss_pred             CC------CHHHHHHHhccC-----ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcc-cccCChhh---cC
Confidence            63      678899888754     577776543  5999999999976 6999999999999998 865  444   57


Q ss_pred             CcEEEEccccCcCCCCCce--EEEEEeC
Q 021539          275 PDLVLCTLDNNTHAQPLKI--TCLLVRR  300 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~Gi--G~L~vr~  300 (311)
                      +|++++|+|| ++|+|.|+  |++++++
T Consensus       269 ~div~~S~sK-~~~g~~Gl~~G~l~~~~  295 (464)
T 1ibj_A          269 ADIVMHSATK-FIAGHSDVMAGVLAVKG  295 (464)
T ss_dssp             CSEEEEETTT-TTTCSSCCCCEEEEECS
T ss_pred             CEEEEECCcc-cccCCCCCcEEEEEECh
Confidence            9999999999 55548887  9999985

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.59  E-value=9e-16  Score=144.59  Aligned_cols=162  Identities=15%  Similarity=0.080  Sum_probs=115.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HH--HHHHhCCcEEEEEeCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IK--GFAAQKESKVIAAPETW  202 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~--~la~~~G~~V~~vp~~~  202 (311)
                      .+.+|+.+++++|+++   ..+|+.|+|+|+++++.++ +.+|+.|+ ....|....  +.  .+.. .+.++..++++.
T Consensus        71 ~~~~r~~la~~~g~~~---~~i~~~sGt~a~~~a~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~  145 (405)
T 2vi8_A           71 EELARERAKQLFGAEH---ANVQPHSGAQANMAVYFTV-LEHGDTVLGMNLSHGGHLTHGSPVNFSG-VQYNFVAYGVDP  145 (405)
T ss_dssp             HHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCTTTTCTTSHHH-HHSEEEEECBCT
T ss_pred             HHHHHHHHHHHhCCCc---eEEEecCcHHHHHHHHHHh-cCCCCEEEEecccccchhcccchhhhcc-ceeEEEeccccc
Confidence            3469999999999963   2555444599999999887 57899876 444554210  10  1111 134677777653


Q ss_pred             CCcccCHHHHHhhhhc-cCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCC---CCcE
Q 021539          203 LDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALH---RPDL  277 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l---~~Df  277 (311)
                      .++.+|.++|++.+++ +     +++|.++....|...|+++|.+ |+++|+++++|++|+. |..+.+....   .+|+
T Consensus       146 ~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~~~~~~~~~~~di  219 (405)
T 2vi8_A          146 ETHVIDYDDVREKARLHR-----PKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIA-GLVAAGLHPNPVPYAHF  219 (405)
T ss_dssp             TTCSBCHHHHHHHHHHHC-----CSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHTTSSCCSTTTCSE
T ss_pred             ccCCcCHHHHHHHHHhcC-----CeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccc-cccccCcCCCccccCCE
Confidence            3567899999999975 3     4566664335788889999966 6999999999999997 7654444332   6899


Q ss_pred             EEEccccCcCCCCCceEEEEEeCCC
Q 021539          278 VLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       278 l~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +++|+|| ++|+|.| |++++++++
T Consensus       220 ~~~s~sK-~~~g~~g-G~~~~~~~~  242 (405)
T 2vi8_A          220 VTTTTHK-TLRGPRG-GMILCQEQF  242 (405)
T ss_dssp             EEEESSS-TTCCCSC-EEEEECHHH
T ss_pred             EEEeccc-cCCCCCC-eEEEEcHHH
Confidence            9999999 6655889 999988654

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.59  E-value=8.1e-15  Score=135.16  Aligned_cols=169  Identities=9%  Similarity=-0.017  Sum_probs=117.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHH--HHHhC-CcEEEEEeC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKG--FAAQK-ESKVIAAPE  200 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~--la~~~-G~~V~~vp~  200 (311)
                      ....++.|+.+++++| .  +.+|+||+|+|+|+.+++.++ ..+|+.|++.. .|... ...  +.... |.++..+|.
T Consensus        42 ~~~~~~l~~~la~~~g-~--~~~v~~~~~gt~a~~~al~~~-~~~gd~vi~~~~~~~~~-~~~~~~~~~~~g~~~~~v~~  116 (356)
T 1v72_A           42 DELTAQVKRKFCEIFE-R--DVEVFLVPTGTAANALCLSAM-TPPWGNIYCHPASHINN-DECGAPEFFSNGAKLMTVDG  116 (356)
T ss_dssp             SHHHHHHHHHHHHHHT-S--CCEEEEESCHHHHHHHHHHTS-CCTTEEEEECTTSHHHH-SSTTHHHHHTTSCEEEECCC
T ss_pred             chHHHHHHHHHHHHhC-C--CCcEEEeCCccHHHHHHHHHh-cCCCCEEEEcCccchhh-hhchHHHHHhCCcEEEEecC
Confidence            3456789999999999 3  235999999999999998886 46888886543 33321 111  22223 888888887


Q ss_pred             CCCCcccCHHHHHh-hhhccC--CCCCceEEEEecc-cccc---hhcHHHHHH-HHHCCcEEEecccccCccC---cccC
Q 021539          201 TWLDLRIKGSQLSQ-NFRRKC--KYTPKGLFSYPVV-VNGT---RYSMHWISE-AHRNAWHVLLDATGLVFGE---DQLA  269 (311)
Q Consensus       201 ~~~~g~id~~~L~~-~l~~~~--~~~~t~LVs~~~~-~tG~---i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~---~pld  269 (311)
                      +  ++.++.++|++ .+++..  ...++++|.+... .+|.   ..++++|.+ |+++|+++++|++|+. +.   ...+
T Consensus       117 ~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~  193 (356)
T 1v72_A          117 P--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFA-NALVSLGCS  193 (356)
T ss_dssp             G--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHH-HHHHHHTCC
T ss_pred             C--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhH-hHhccCCCC
Confidence            5  46789999999 887410  0012567766533 4999   455666655 6899999999999864 21   1122


Q ss_pred             CCC----CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          270 LAL----HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       270 l~~----l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ...    .++|++++|+|| + |+|.|.|+++.++++.
T Consensus       194 ~~~~~~~~~~d~~~~s~sK-~-g~~~G~g~~~~~~~~~  229 (356)
T 1v72_A          194 PAEMTWKAGVDALSFGATK-N-GVLAAEAIVLFNTSLA  229 (356)
T ss_dssp             TTTTTGGGTCCEEEECCGG-G-TCSSCEEEEESSGGGH
T ss_pred             HHHhhhhhcCCEEEEeccc-C-CCcCccEEEEECHHHH
Confidence            222    368999999999 5 5599999999877654

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.59  E-value=1.3e-14  Score=135.80  Aligned_cols=154  Identities=12%  Similarity=0.017  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      ++++  +|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  ....++..|.++..+|  
T Consensus        69 ~~l~~~la~~~~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~v~--  141 (370)
T 2z61_A           69 LELREKISELYKDKYKADIIPD--NIIITGGSSLGLFFALSSI-IDDGDEVLIQNPCYPC--YKNFIRFLGAKPVFCD--  141 (370)
T ss_dssp             HHHHHHHHHHHHHHSSCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCTH--HHHHHHHTTCEEEEEC--
T ss_pred             HHHHHHHHHHHHHHhCCCCChh--hEEECCChHHHHHHHHHHh-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEeC--
Confidence            368888888875      4444  4999999999999999987 57889886 4455653  2233455799988887  


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc---ccCCCC---
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED---QLALAL---  272 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~~---  272 (311)
                           +|.++|++.++++     +++|.++..  .+|.++|++ |.+ |+++|+++++|.+|+. +..   +.++..   
T Consensus       142 -----~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~  209 (370)
T 2z61_A          142 -----FTVESLEEALSDK-----TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNG-LVYEGKCYSAIEFDE  209 (370)
T ss_dssp             -----SSHHHHHHHCCSS-----EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTT-CBSSSCCCCGGGTCT
T ss_pred             -----CCHHHHHHhcccC-----ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhh-cccCCCCcCHHHccC
Confidence                 4678898888753     456655433  599999999 865 6999999999999997 543   344433   


Q ss_pred             -CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       .+.|+++.|+|| ++| +.|  +|+++.++++.
T Consensus       210 ~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  241 (370)
T 2z61_A          210 NLEKTILINGFSK-LYA-MTGWRIGYVISNDEII  241 (370)
T ss_dssp             TCSSEEEEEESTT-TTT-CGGGCCEEEECCHHHH
T ss_pred             CCCcEEEEecChh-ccC-CccceEEEEEECHHHH
Confidence             367999999999 888 668  99999887543

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.59  E-value=1.3e-14  Score=142.50  Aligned_cols=165  Identities=10%  Similarity=-0.063  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEE--eCCHHHHHHHHHhcCCCCCCCEEEEcc--CcCh--HHH-------HHHHHhCCcE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLF--VPNYKEAMLMIGESYPFFKGNYYLTII--SEES--DYI-------KGFAAQKESK  194 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvF--TsnaTealnlv~~s~~~~~Gd~Ils~~--eh~~--~~~-------~~la~~~G~~  194 (311)
                      .++.++.+|+++|++.   .++|  ++|+|+|+++++.++ +++||+|++..  .|..  +.+       ...++..|++
T Consensus        75 ~~~Le~~lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~  150 (427)
T 3i16_A           75 RDSLDAVYARVFNTES---ALVRPHFVNGTHALGAALFGN-LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGIN  150 (427)
T ss_dssp             HHHHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHH-CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCE
T ss_pred             HHHHHHHHHHHhCCcc---eEEeCCCccHHHHHHHHHHHH-hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCE
Confidence            4567788999999953   3776  889999999998887 57899987554  3331  111       0223456999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhh--ccCCCCCceEEEEec----c--cccchhcHHHHHH-HHH--CCcEEEecccccCc
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFR--RKCKYTPKGLFSYPV----V--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVF  263 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~--~~~~~~~t~LVs~~~----~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~  263 (311)
                      +..+|.+. ++.+|.++|+++++  ++     +++|.+..    .  .+|.+.|+++|.+ ||+  +|+++++|.+++. 
T Consensus       151 ~~~v~~~~-~g~~D~e~l~~~l~~~~~-----tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~-  223 (427)
T 3i16_A          151 YKQVDLKE-DGKPNLEEIEKVLKEDES-----ITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGE-  223 (427)
T ss_dssp             EEECCCCT-TSSCCHHHHHHHHHTCTT-----EEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTT-
T ss_pred             EEEecCcc-CCCcCHHHHHHHhhCCCC-----CEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcc-
Confidence            99999875 68899999999998  43     67877755    2  5899999999976 688  9999999999998 


Q ss_pred             cCcccCCCCCCCcEEEEccccCcCCCC--CceEEEEEeCCCCc
Q 021539          264 GEDQLALALHRPDLVLCTLDNNTHAQP--LKITCLLVRRKSFD  304 (311)
Q Consensus       264 G~~pldl~~l~~Dfl~~S~HK~l~G~P--~GiG~L~vr~~~~~  304 (311)
                      +....+...+++|+++.|+|| .+|++  ...|+++.++++.+
T Consensus       224 ~~~~~~p~~~gaDiv~~S~sK-~lgg~g~~~gG~i~~~~~li~  265 (427)
T 3i16_A          224 FMDTKEPTDVGADLIAGSLIK-NIGGGIAPTGGYLAGTKDCIE  265 (427)
T ss_dssp             TSSSSCGGGGTCSEEEEETTS-GGGTTTCCSCEEEEECHHHHH
T ss_pred             ccccCCccccCCeEEEecCcc-cCCCCCCceEEEEEECHHHHH
Confidence            763333334689999999999 78741  23488888765543

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.59  E-value=4.1e-14  Score=137.52  Aligned_cols=179  Identities=10%  Similarity=-0.034  Sum_probs=132.7

Q ss_pred             cchhHHHHhcCC-CCcc-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh
Q 021539          105 EPSRLLDILSKK-TSFK-GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES  181 (311)
Q Consensus       105 ~~~~l~~~l~~~-ss~~-G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~  181 (311)
                      ....+.+.+.+. ..|. ++......++.++++|++.|.+    .++||+|+++|+.+++.++ .++||+|+. ...|+.
T Consensus        58 ~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~----~~~~~~sG~~Ai~~al~~l-~~~Gd~Vi~~~~~y~~  132 (414)
T 3ndn_A           58 SAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAP----AAFATASGMAAVFTSLGAL-LGAGDRLVAARSLFGS  132 (414)
T ss_dssp             SHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTT-CCTTCEEEEESCCCHH
T ss_pred             ChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEcCCccch
Confidence            344455666443 3332 5556666789999999999973    3899999999999998887 678999874 445542


Q ss_pred             --HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEe
Q 021539          182 --DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLL  256 (311)
Q Consensus       182 --~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlv  256 (311)
                        ..+..+.+..|+++..+|.+      |.++|+++++++     +++|.+..  +.+|.+.|+++|.+ |+++|+++++
T Consensus       133 ~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~ai~~~-----t~~v~le~p~NptG~~~~l~~i~~la~~~g~~liv  201 (414)
T 3ndn_A          133 CFVVCSEILPRWGVQTVFVDGD------DLSQWERALSVP-----TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVL  201 (414)
T ss_dssp             HHHHHHTHHHHTTCEEEEECTT------CHHHHHHHTSSC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHcCcEEEEeCCC------CHHHHHHhcCCC-----CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEE
Confidence              22333445679999999874      578899998765     45666543  36999999999976 6999999999


Q ss_pred             cccccCccCcccCCCCCCCcEEEEccccCcCCCCCc---eEEEEEeCCCC
Q 021539          257 DATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKSF  303 (311)
Q Consensus       257 DAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~  303 (311)
                      |.+|+. |.....+ .+++|+++.|++| ++| +.|   .|+++.+++.+
T Consensus       202 De~~~~-~~~~~~~-~~g~div~~S~sK-~l~-~~G~~~~G~vv~~~~~~  247 (414)
T 3ndn_A          202 DNVFAT-PLLQQGF-PLGVDVVVYSGTK-HID-GQGRVLGGAILGDREYI  247 (414)
T ss_dssp             ECTTTH-HHHCCCG-GGTCSEEEEETTT-TTT-CSSCCCCEEEEECHHHH
T ss_pred             ECCCcc-cccCCch-hcCCCeEeccCCc-ccc-CCCCceEEEEEECHHHH
Confidence            999997 7544444 4678999999999 777 557   68888876543

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.59  E-value=1.4e-14  Score=136.30  Aligned_cols=164  Identities=10%  Similarity=0.023  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC----GL--SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L----ga--~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++    |+  +++ ..|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        70 ~~l~~~la~~l~~~~g~~~~~~-~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~v~~~  145 (386)
T 1u08_A           70 QALREAIAQKTERLYGYQPDAD-SDITVTAGATEALYAAITAL-VRNGDEVICFDPSYDS--YAPAIALSGGIVKRMALQ  145 (386)
T ss_dssp             HHHHHHHHHHHHHHHSCCCCTT-TTEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC-CCEEEcCChHHHHHHHHHHh-CCCCCEEEEeCCCchh--HHHHHHHcCCEEEEeecC
Confidence            36777777774    64  444 14999999999999999987 46788886 4455553  223345679999999986


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcH---HHHHH-HHHCCcEEEecccccCc---cCcccCCC-
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSM---HWISE-AHRNAWHVLLDATGLVF---GEDQLALA-  271 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~-  271 (311)
                      ..+..++.++|++.++++     +++|.+...  .+|.++|.   ++|.+ |+++|+++++|.+|+..   |....++. 
T Consensus       146 ~~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~  220 (386)
T 1u08_A          146 PPHFRVDWQEFAALLSER-----TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLA  220 (386)
T ss_dssp             TTTCCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGG
T ss_pred             cccCcCCHHHHHHhhccc-----CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhc
Confidence            534568999999988653     466666432  59999985   45544 58899999999999851   22222332 


Q ss_pred             ---CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 ---LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ---~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                         ..+.|+++.|+|| +|| +.|  +|++++++++.
T Consensus       221 ~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  255 (386)
T 1u08_A          221 HPQLRERAVAVSSFGK-TYH-MTGWKVGYCVAPAPIS  255 (386)
T ss_dssp             SHHHHTTEEEEEEHHH-HTT-CGGGCCEEEECCHHHH
T ss_pred             ccCccCcEEEEecchh-hcC-CcccceEEEEcCHHHH
Confidence               2468999999999 888 668  89999876543

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.58  E-value=4.1e-14  Score=132.81  Aligned_cols=161  Identities=12%  Similarity=0.038  Sum_probs=121.3

Q ss_pred             HHHHHHHHHH------cCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKH------CGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~------Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ++.|+.+|++      ++++++  .|+||+|+|+++++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        72 ~~l~~~la~~l~~~~g~~~~~~--~v~~~~G~~~al~~~~~~l-~~~gd~Vl~~~~~y~~--~~~~~~~~g~~~~~v~~~  146 (369)
T 3cq5_A           72 VELRDELAAYITKQTGVAVTRD--NLWAANGSNEILQQLLQAF-GGPGRTALGFQPSYSM--HPILAKGTHTEFIAVSRG  146 (369)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CSTTCEEEEEESSCTH--HHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHhhhhcccCCCChH--hEEECCChHHHHHHHHHHh-cCCCCEEEEcCCChHH--HHHHHHHcCCEEEEecCC
Confidence            3788888888      566654  4999999999999999887 46789886 4455553  223345679999999986


Q ss_pred             CCCcccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---cCC-CCC
Q 021539          202 WLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---LAL-ALH  273 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---ldl-~~l  273 (311)
                      . +..++.++|++.+++ +     +++|.++..  .+|.++|++++.+ ++..++++++|.+|+. +...   +++ ...
T Consensus       147 ~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~  219 (369)
T 3cq5_A          147 A-DFRIDMDVALEEIRAKQ-----PDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAE-FSPSPSATTLLEKY  219 (369)
T ss_dssp             T-TSSCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGG-GCCSCCGGGGTTTC
T ss_pred             c-CCCCCHHHHHHHhhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchh-hcCCcchHHHHhhC
Confidence            4 557899999999876 4     356655533  5999999999976 5788899999999997 6532   222 223


Q ss_pred             C-CcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          274 R-PDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       274 ~-~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      + .++++.|+|| ++| +.|  +|++++++++.
T Consensus       220 ~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  250 (369)
T 3cq5_A          220 PTKLVVSRTMSK-AFD-FAGGRLGYFVANPAFI  250 (369)
T ss_dssp             TTTEEEEEESSS-TTS-CGGGCCEEEEECTHHH
T ss_pred             CCCEEEEEechH-hcC-CcccceEEEEeCHHHH
Confidence            4 6799999999 887 447  79999987643

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.58  E-value=5.4e-14  Score=132.60  Aligned_cols=163  Identities=14%  Similarity=0.150  Sum_probs=118.7

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.+++++    |  ++++  +|+||+|+|+|+++++.++ +.+| |.|+. ...|+.  +...++..|.++..+|.+
T Consensus        80 ~lr~~la~~l~~~~g~~~~~~--~i~~~~g~~~al~~~~~~l-~~~g~d~vl~~~p~~~~--~~~~~~~~g~~~~~v~~~  154 (398)
T 3ele_A           80 ETRAAIAEFLNNTHGTHFNAD--NLYMTMGAAASLSICFRAL-TSDAYDEFITIAPYFPE--YKVFVNAAGARLVEVPAD  154 (398)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCSTTCEEEEESSCCTH--HHHHHHHTTCEEEEECCC
T ss_pred             HHHHHHHHHHHHHhCCCCChH--HEEEccCHHHHHHHHHHHH-cCCCCCEEEEeCCCchh--hHHHHHHcCCEEEEEecC
Confidence            5677777766    4  5544  5999999999999999987 5788 88863 344442  233455679999999987


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHH---HH-HHH------CCcEEEecccccCc---c-C
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWI---SE-AHR------NAWHVLLDATGLVF---G-E  265 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I---~~-a~~------~g~~vlvDAaQsv~---G-~  265 (311)
                      ..+..++.++|++.++++     +++|.++..  .||.++|.+++   .+ |++      +|+++++|.+|+..   | .
T Consensus       155 ~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~  229 (398)
T 3ele_A          155 TEHFQIDFDALEERINAH-----TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIK  229 (398)
T ss_dssp             TTTSSCCHHHHHHTCCTT-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCC
T ss_pred             CcCCcCCHHHHHHHhCcC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCC
Confidence            545578999999998754     566666432  69999996655   33 577      89999999999851   1 2


Q ss_pred             cccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          266 DQLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       266 ~pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      .+......+.++++.|++| .|| ..|  +|+++++++..+
T Consensus       230 ~~~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~~  268 (398)
T 3ele_A          230 VPFVTKYYDNTLVCYSYSK-SLS-LPGERIGYVLVPDEVYD  268 (398)
T ss_dssp             CCCGGGTCSSEEEEEESTT-TSS-CTTTCCEEEECCTTSTT
T ss_pred             cCChHhhcCCeEEEEehhh-cCC-CccceeEEEEEcchhhh
Confidence            2333344567899999999 887 335  899999988653

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.58  E-value=2.1e-14  Score=135.67  Aligned_cols=162  Identities=14%  Similarity=0.078  Sum_probs=120.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ....++.++.+++++|++    +|+||+|+|+|+++++.++ ..+|+.|+...-.|.... ..++..|.++..+|.    
T Consensus        87 ~~~~~~l~~~la~~~g~~----~v~~~~ggt~a~~~~~~~~-~~~gd~V~~~~p~~~~~~-~~~~~~g~~~~~v~~----  156 (398)
T 3a2b_A           87 LDIHVELEEKLSAYVGKE----AAILFSTGFQSNLGPLSCL-MGRNDYILLDERDHASII-DGSRLSFSKVIKYGH----  156 (398)
T ss_dssp             CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHS-SCTTCEEEEETTCCHHHH-HHHHHSSSEEEEECT----
T ss_pred             cHHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEECCccCHHHH-HHHHHcCCceEEeCC----
Confidence            355678999999999973    4999999999999999988 578898864433332222 334556999888875    


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc---ccCCCC-----C
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED---QLALAL-----H  273 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~~-----l  273 (311)
                        ++.++|++.+++... .++++|.++..  .||.++|+++|.+ |+++|+++++|.+|+. +..   ..++..     .
T Consensus       157 --~d~~~l~~~l~~~~~-~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~  232 (398)
T 3a2b_A          157 --NNMEDLRAKLSRLPE-DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSL-GVIGHKGAGTASHFGLND  232 (398)
T ss_dssp             --TCHHHHHHHHHTSCS-SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT-TTSSGGGCCHHHHHTCGG
T ss_pred             --CCHHHHHHHHHhhcc-CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcc-cccCCCCCchHhhcCCCc
Confidence              367889988875211 12567766544  5899999999966 6999999999999986 632   233311     1


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++|+++.|+|| ++| |.| |+++.++++.
T Consensus       233 ~~di~~~s~sK-~~~-~~G-G~~~~~~~~~  259 (398)
T 3a2b_A          233 DVDLIMGTFSK-SLA-SLG-GFVAGDADVI  259 (398)
T ss_dssp             GCSEEEEESSS-TTC-SSC-EEEEECHHHH
T ss_pred             CCeEEEecccc-ccc-CCC-cEEEeCHHHH
Confidence            37999999999 899 889 9999886543

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.58  E-value=6e-14  Score=131.86  Aligned_cols=162  Identities=16%  Similarity=0.107  Sum_probs=117.0

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL-  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~-  203 (311)
                      +.|+.+++++    |++.+..+|+||+|+|+|+++++.++ +.+|+.|+ ....|+.  +...++..|.++..+|.+.. 
T Consensus        71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~  147 (388)
T 1j32_A           71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAM-IEPGDEVIIPAPFWVS--YPEMVKLAEGTPVILPTTVET  147 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH--HHHHHHHTTCEEEEECCCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCChh--HHHHHHHcCCEEEEecCCccc
Confidence            5666677766    54322235999999999999999987 57889886 4455553  22334567999999998642 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc----ccCCCC-
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED----QLALAL-  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~----pldl~~-  272 (311)
                      +..++.++|++.++++     +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+++. +..    ..++.. 
T Consensus       148 ~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~  221 (388)
T 1j32_A          148 QFKVSPEQIRQAITPK-----TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEK-ILYDDAQHLSIGAA  221 (388)
T ss_dssp             TTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGS
T ss_pred             CCCCCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCCCHHHc
Confidence            3468999999998754     566665433  5999977   666655 6899999999999986 321    112222 


Q ss_pred             ----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 ----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 ----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                          .+.|+++.|+|| ++| +.|  +|++++++++
T Consensus       222 ~~~~~~~~~~~~s~sK-~~~-~~G~r~G~~~~~~~~  255 (388)
T 1j32_A          222 SPEAYERSVVCSGFAK-TYA-MTGWRVGFLAGPVPL  255 (388)
T ss_dssp             CHHHHHTEEEEEESTT-TTT-CTTTCCEEEECCHHH
T ss_pred             cccccCCEEEEeechh-ccC-CcccceEEEEeCHHH
Confidence                357999999999 888 668  9999988654

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.58  E-value=6.6e-14  Score=134.22  Aligned_cols=156  Identities=7%  Similarity=-0.021  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...++.|+.+|+++|++    .|+||+|+|+|+++++.++.  +|+.|+ ...+|+.. . ..++..|+++..++.+..+
T Consensus        52 ~~~~~l~~~la~~~~~~----~v~~~~ggt~al~~~l~~l~--~gd~Vlv~~~~~~~~-~-~~~~~~G~~~~~v~~~~~~  123 (424)
T 2po3_A           52 PLVREFEERVAGLAGVR----HAVATCNATAGLQLLAHAAG--LTGEVIMPSMTFAAT-P-HALRWIGLTPVFADIDPDT  123 (424)
T ss_dssp             HHHHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHHT--CCSEEEEESSSCTHH-H-HHHHHTTCEEEEECBCTTT
T ss_pred             HHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcC--CCCEEEECCCccHHH-H-HHHHHcCCEEEEEecCCCc
Confidence            45678999999999983    49999999999999999874  578876 55566632 2 2345569999999987546


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC--CcEEEEc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR--PDLVLCT  281 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~--~Dfl~~S  281 (311)
                      +.+|.++|++.++++     +++|.+.+ .+|...|+++|.+ |+++|+++++|++|+. |.. .+....+  +|++++|
T Consensus       124 ~~~d~~~l~~~i~~~-----~~~v~~~~-~tG~~~~l~~i~~la~~~~~~li~Dea~~~-g~~-~~~~~~~~~~di~~~S  195 (424)
T 2po3_A          124 GNLDPDQVAAAVTPR-----TSAVVGVH-LWGRPCAADQLRKVADEHGLRLYFDAAHAL-GCA-VDGRPAGSLGDAEVFS  195 (424)
T ss_dssp             SSBCHHHHGGGCCTT-----EEEEEEEC-GGGCCCCHHHHHHHHHHTTCEEEEECTTCT-TCE-ETTEETTSSSSEEEEE
T ss_pred             CCcCHHHHHHhhCcC-----CcEEEEEC-CCCCcCCHHHHHHHHHHcCCEEEEECcccc-CCe-ECCeecccccCEEEEe
Confidence            678999999988754     56776654 6999999999966 6999999999999997 654 3322222  6899999


Q ss_pred             cc--cCcCCCCCceEEEEEe
Q 021539          282 LD--NNTHAQPLKITCLLVR  299 (311)
Q Consensus       282 ~H--K~l~G~P~GiG~L~vr  299 (311)
                      +|  | .++ |...|+++.+
T Consensus       196 ~sk~K-~l~-~~~~G~~v~~  213 (424)
T 2po3_A          196 FHATK-AVN-AFEGGAVVTD  213 (424)
T ss_dssp             CCTTS-SSC-CSSCEEEEES
T ss_pred             CCCCC-Ccc-CCCCeEEEeC
Confidence            87  8 666 4356777766

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.58  E-value=5.8e-15  Score=140.91  Aligned_cols=164  Identities=10%  Similarity=-0.080  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCC--EEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYP-FFKGN--YYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~-~~~Gd--~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ++.|+.+|++++      ++++  +|+||+|+|+|+++++.++. +.+|+  .|+ ....|+.  +...++..|.++..+
T Consensus        85 ~~lr~~la~~~~~~~g~~~~~~--~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~--~~~~~~~~g~~~~~v  160 (437)
T 3g0t_A           85 PELKQEASRFAKLFVNIDIPAR--ACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNL--NKLQCRILGQKFESF  160 (437)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHH--HHHHHHHHTCCCEEE
T ss_pred             HHHHHHHHHHHHHhhCCCCCcc--cEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHh--HHHHHHHcCCEEEEE
Confidence            478889999888      5555  49999999999999998873 26888  876 3344442  223344568999999


Q ss_pred             eCCCCCcccCHHHHHhhh-hccCCCCCceEEEEec--ccccchhcHHH---HHH-HHHCCcEEEecccccCccC----cc
Q 021539          199 PETWLDLRIKGSQLSQNF-RRKCKYTPKGLFSYPV--VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGE----DQ  267 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l-~~~~~~~~t~LVs~~~--~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~----~p  267 (311)
                      |.+..+..+|.++|++.+ +.+     +++|.++.  +.||+++|.++   |.+ |+++|+++++|.+|+. ..    .+
T Consensus       161 ~~~~~~~~~d~~~l~~~l~~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~-~~~~~~~~  234 (437)
T 3g0t_A          161 DLFEYRGEKLREKLESYLQTGQ-----FCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFG-MDFRKDYS  234 (437)
T ss_dssp             EGGGGCTTHHHHHHHHHHTTTC-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CCTTSCCC
T ss_pred             eecCCCCccCHHHHHHHHhcCC-----ceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhh-cccCCCcC
Confidence            986434468899999999 433     45665532  36999998554   544 6899999999999984 22    22


Q ss_pred             c--------CCCC-CCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          268 L--------ALAL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       268 l--------dl~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +        ++.. .+.++++.|+|| .+| +.|  +|++++++++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~~  280 (437)
T 3g0t_A          235 HPGEPLYQPSVANYTDNYILALSSSK-AFS-YAGQRIGVLMISGKLYE  280 (437)
T ss_dssp             STTSSCCCCCGGGTCSCEEEEEESTT-TTS-CGGGCCEEEEECHHHHH
T ss_pred             cccccchhhccCCCCCcEEEEEcCcc-CCC-CccceeEEEEECHHHhh
Confidence            2        3433 567899999999 887 456  899998865543

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.57  E-value=3.8e-14  Score=134.03  Aligned_cols=163  Identities=9%  Similarity=-0.010  Sum_probs=118.0

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC-
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW-  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~-  202 (311)
                      .+.|+.+++++    |++.+..+|+||+|+|+|+++++.++ +.+||.|+ ....|+.  +...++..|.++..+|.+. 
T Consensus        71 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~  147 (385)
T 1b5p_A           71 PELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI-LDPGDEVIVLSPYWVS--YPEMVRFAGGVVVEVETLPE  147 (385)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH--HHHHHHHTTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCchh--HHHHHHHcCCEEEEeecCcc
Confidence            36788888877    43222235999999999999999987 57899876 4445542  2334556799999999864 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccCCCCC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLALALH  273 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~~l  273 (311)
                      .+..++.++|++.++++     +++|.++.  +-||.++|   +++|.+ |+++|+++++|.+++- ...   ..++..+
T Consensus       148 ~~~~~d~~~l~~~l~~~-----~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~  221 (385)
T 1b5p_A          148 EGFVPDPERVRRAITPR-----TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEH-LLYEGEHFSPGRV  221 (385)
T ss_dssp             GTTCCCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSSCCCCGGGT
T ss_pred             cCCCCCHHHHHHhcCCC-----CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCCHHHc
Confidence            23468999999888754     45665543  25999988   556644 6899999999999886 322   2233333


Q ss_pred             --CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          274 --RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       274 --~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                        +.++++.|++| .|| +.|  +|++++++++
T Consensus       222 ~~~~~i~~~s~SK-~~~-~~G~RiG~~~~~~~~  252 (385)
T 1b5p_A          222 APEHTLTVNGAAK-AFA-MTGWRIGYACGPKEV  252 (385)
T ss_dssp             CTTTEEEEEESTT-TTT-CGGGCCEEEECCHHH
T ss_pred             CCCCEEEEEechh-hcC-CcccceEEEEeCHHH
Confidence              56899999999 888 558  9999987654

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.57  E-value=8.3e-15  Score=139.49  Aligned_cols=163  Identities=15%  Similarity=0.023  Sum_probs=118.4

Q ss_pred             HHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.+|+++    |++.+.. +|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+..
T Consensus        66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~-~~~gd~Vl~~~~~y~~--~~~~~~~~g~~~~~v~~~~~  142 (411)
T 2o0r_A           66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL-VEPGSEVLLIEPFYDS--YSPVVAMAGAHRVTVPLVPD  142 (411)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCcHh--HHHHHHHcCCEEEEeecccc
Confidence            5677777776    7532222 4999999999999999887 56889886 4455653  22334557999999998642


Q ss_pred             --CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcH---HHHHH-HHHCCcEEEecccccCccC----cccCCC
Q 021539          204 --DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSM---HWISE-AHRNAWHVLLDATGLVFGE----DQLALA  271 (311)
Q Consensus       204 --~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~G~----~pldl~  271 (311)
                        ++.++.++|++.++++     +++|.++..  .+|.++|.   ++|.+ |+++|+++++|.+|+. +.    .+.++.
T Consensus       143 ~~~~~~d~~~l~~~l~~~-----~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~  216 (411)
T 2o0r_A          143 GRGFALDADALRRAVTPR-----TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH-LVFDHARHLPLA  216 (411)
T ss_dssp             TTEEECCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGG
T ss_pred             ccCCCCCHHHHHHhhccC-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcChh
Confidence              3458999999998754     466665433  59999986   55644 6899999999999986 42    223332


Q ss_pred             C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .    .+.|++++|+|| .+| +.|  +|++++++++.
T Consensus       217 ~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  252 (411)
T 2o0r_A          217 GFDGMAERTITISSAAK-MFN-CTGWKIGWACGPAELI  252 (411)
T ss_dssp             GSTTTGGGEEEEEEHHH-HTT-CTTTCEEEEECCHHHH
T ss_pred             hccCCCCCEEEEeechh-hcC-CccceEEEEeeCHHHH
Confidence            2    467999999999 888 668  99999876543

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.56  E-value=1.8e-14  Score=134.43  Aligned_cols=161  Identities=12%  Similarity=0.044  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCGL-SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga-~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      .++.|+.+|+++|+ +++  .|+||+|+|+|+++++.++ +++|++|+ ....|+.  +...++..|.++..+|.+. ++
T Consensus        69 ~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~-~~  142 (367)
T 3euc_A           69 SEALRAKLKEVMQVPAGM--EVLLGNGSDEIISMLALAA-ARPGAKVMAPVPGFVM--YAMSAQFAGLEFVGVPLRA-DF  142 (367)
T ss_dssp             HHHHHHHHHHHHTCCTTC--EEEEEEHHHHHHHHHHHHT-CCTTCEEEEEESCSCC--SCHHHHTTTCEEEEEECCT-TS
T ss_pred             HHHHHHHHHHHhCCCCcc--eEEEcCCHHHHHHHHHHHH-cCCCCEEEEcCCCHHH--HHHHHHHcCCeEEEecCCC-CC
Confidence            45899999999999 433  5999999999999999988 57899886 3344442  1223456799999999986 67


Q ss_pred             ccCHHHHHhhhhc-cCCCCCceEEEEecc--cccchhcHHHH---HH-HHHC--CcEEEecccccCcc-Cccc-CCCCCC
Q 021539          206 RIKGSQLSQNFRR-KCKYTPKGLFSYPVV--VNGTRYSMHWI---SE-AHRN--AWHVLLDATGLVFG-EDQL-ALALHR  274 (311)
Q Consensus       206 ~id~~~L~~~l~~-~~~~~~t~LVs~~~~--~tG~i~Pi~~I---~~-a~~~--g~~vlvDAaQsv~G-~~pl-dl~~l~  274 (311)
                      .+|.++|++.+++ +     +++|.++..  .+|+++|.+++   .+ |+++  |+++++|.+|+..+ ...+ .+...+
T Consensus       143 ~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  217 (367)
T 3euc_A          143 TLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFG  217 (367)
T ss_dssp             CCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCT
T ss_pred             CCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCC
Confidence            8999999999987 4     456666533  59999876655   33 4788  99999999988311 1111 234456


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .++++.|++| . | +.|  +|+++.+++.
T Consensus       218 ~~i~~~s~sK-~-~-~~G~r~G~~~~~~~~  244 (367)
T 3euc_A          218 NLLVMRTVSK-L-G-LAGIRLGYVAGDPQW  244 (367)
T ss_dssp             TEEEEEECCC-T-T-SCSCCEEEEEECHHH
T ss_pred             CEEEEecchh-h-c-ccccCceeeeeCHHH
Confidence            7799999999 5 5 334  7888887654

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.56  E-value=1.3e-14  Score=137.82  Aligned_cols=159  Identities=13%  Similarity=0.046  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++      +++++  +|+||+|+|+|+++++.++ +.+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        81 ~~l~~~la~~l~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~  155 (406)
T 1xi9_A           81 PELRKAIVEREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILVPGPSYPP--YTGLVKFYGGKPVEYRTI  155 (406)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH--HHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCHH--HEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc--HHHHHHHcCCEEEEeecC
Confidence            46788888887      45544  5999999999999999987 57889886 4445542  233445679999999876


Q ss_pred             C-CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccCCC
Q 021539          202 W-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLALA  271 (311)
Q Consensus       202 ~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pldl~  271 (311)
                      . .+..++.++|++.++++     +++|.++..  .+|.++|   +++|.+ |+++|+++++|.+|+. +..   +.++.
T Consensus       156 ~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~-~~~~~~~~~~~  229 (406)
T 1xi9_A          156 EEEDWQPDIDDIRKKITDR-----TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDL-MTYEGEHISPG  229 (406)
T ss_dssp             GGGTSEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBSSSCCCCHH
T ss_pred             CCcCCcCCHHHHHHhhCcC-----ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccc-cccCCCCCCHH
Confidence            3 23468999999998754     466655433  6999988   667755 6899999999999986 432   22332


Q ss_pred             C--CCC-cEEEEccccCcCCCCCc--eEEEE--EeC
Q 021539          272 L--HRP-DLVLCTLDNNTHAQPLK--ITCLL--VRR  300 (311)
Q Consensus       272 ~--l~~-Dfl~~S~HK~l~G~P~G--iG~L~--vr~  300 (311)
                      .  .+. |+++.|+|| ++| +.|  +|+++  .++
T Consensus       230 ~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~  263 (406)
T 1xi9_A          230 SLTKDVPVIVMNGLSK-VYF-ATGWRLGYMYFVDPE  263 (406)
T ss_dssp             HHCSSSCEEEEEESTT-TTC-CGGGCCEEEEEECTT
T ss_pred             HcCCCceEEEEecccc-ccC-CCccEEEEEEEecCc
Confidence            2  255 899999999 887 568  89999  555

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.56  E-value=1.5e-14  Score=141.10  Aligned_cols=163  Identities=8%  Similarity=-0.084  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEE--eCCHHHHHHHHHhcCCCCCCCEEEEcc--CcChH-HHH-------HHHHhCCcEE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLF--VPNYKEAMLMIGESYPFFKGNYYLTII--SEESD-YIK-------GFAAQKESKV  195 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvF--TsnaTealnlv~~s~~~~~Gd~Ils~~--eh~~~-~~~-------~la~~~G~~V  195 (311)
                      .++.++.+|+++|++.   .++|  |+|+|+|+++++.++ +++||+|++..  .|... .+.       ..++..|+++
T Consensus        61 ~~~Le~~lA~l~g~e~---alv~p~~~sGt~Ai~~al~al-l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~  136 (409)
T 3jzl_A           61 RDTLERVYATVFKTEA---ALVRPQIISGTHAISTVLFGI-LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGY  136 (409)
T ss_dssp             HHHHHHHHHHHHTCSE---EEEETTSCSHHHHHHHHHHHH-CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEE
T ss_pred             HHHHHHHHHHHhCCCc---EEEECCCccHHHHHHHHHHHh-cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEE
Confidence            4467788999999852   3666  899999999998887 57899987553  23321 111       1234569999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec----c--cccchhcHHHHHH-HHH--CCcEEEecccccCccCc
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV----V--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVFGED  266 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~----~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G~~  266 (311)
                      ..++.++ ++.+|+++|+++++++     +++|.+..    .  .+|.+.|+++|.+ ||+  +|+++++|.+++. +..
T Consensus       137 ~~v~~~~-~g~~d~e~l~~ai~~~-----tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~-~~~  209 (409)
T 3jzl_A          137 SSVPLLE-NGDVDFPRIAKKMTPK-----TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE-FVE  209 (409)
T ss_dssp             EECCCCT-TSCCCHHHHHHHCCTT-----EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT-TTS
T ss_pred             EEeCCCC-CCCcCHHHHHHhccCC-----CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc-ccc
Confidence            9999875 7889999999999764     67887765    3  5999999999966 688  9999999999998 763


Q ss_pred             ccCCCCCCCcEEEEccccCcCCCCC--ceEEEEEeCCC
Q 021539          267 QLALALHRPDLVLCTLDNNTHAQPL--KITCLLVRRKS  302 (311)
Q Consensus       267 pldl~~l~~Dfl~~S~HK~l~G~P~--GiG~L~vr~~~  302 (311)
                      ..+...+++|++++|+|| ++|++.  ..|+++.++++
T Consensus       210 ~~~p~~~g~Div~~S~sK-~lgg~~~~~GG~v~~~~~l  246 (409)
T 3jzl_A          210 YQEPPEVGADIIAGSLIK-NPGGGLAKTGGYIAGKEAL  246 (409)
T ss_dssp             SCCSGGGTCSEEEEETTS-GGGTTTCSSCEEEEECHHH
T ss_pred             cCCccccCCeEEEECccc-cCCccCCceEEEEEeCHHH
Confidence            334445689999999999 776331  13777776544

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.56  E-value=7.2e-14  Score=130.66  Aligned_cols=165  Identities=7%  Similarity=0.087  Sum_probs=118.9

Q ss_pred             hhhHHHHHHHHHHHHHcC--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEe
Q 021539          123 FISIPEIQARNRALKHCG--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lg--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      ......++.++.+++++|  ++++  +|+||+|+|+|+++++.++ ..+|+.|++. ..|+.  ....++..|.++..+|
T Consensus        68 ~~~~~~~~l~~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~  142 (391)
T 4dq6_A           68 RPDSYNESIVNWLYRRHNWKIKSE--WLIYSPGVIPAISLLINEL-TKANDKIMIQEPVYSP--FNSVVKNNNRELIISP  142 (391)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCTH--HHHHHHHTTCEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCcHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCHH--HHHHHHHcCCeEEeee
Confidence            345566789999999999  5544  5999999999999999887 5688998743 34442  2233456799999998


Q ss_pred             CC-CCC--cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcc
Q 021539          200 ET-WLD--LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQ  267 (311)
Q Consensus       200 ~~-~~~--g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~p  267 (311)
                      .+ +.+  ..++.++|++.+++      +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+|+..   |+..
T Consensus       143 ~~~~~~~~~~~d~~~l~~~l~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~  216 (391)
T 4dq6_A          143 LQKLENGNYIMDYEDIENKIKD------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKH  216 (391)
T ss_dssp             CEECTTSCEECCHHHHHHHCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC
T ss_pred             eeecCCCceEeeHHHHHHHhhc------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCc
Confidence            86 322  35799999998875      356655433  5999955   555644 68999999999999862   2233


Q ss_pred             cCCCCCCCc-----EEEEccccCcCCCCCc--eEEEEEeC
Q 021539          268 LALALHRPD-----LVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       268 ldl~~l~~D-----fl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      .++..+..|     +++.|+|| .+| +.|  +|+++.++
T Consensus       217 ~~~~~~~~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~  254 (391)
T 4dq6_A          217 IPMASISKEFEKNTITCMAPTK-TFN-IAGLQSSYVVLPD  254 (391)
T ss_dssp             CCGGGSCHHHHHTEEEEECSHH-HHT-CGGGCCEEEECCS
T ss_pred             cCHHHcCccccCcEEEEEechh-hcc-CcccceEEEEeCC
Confidence            455555444     99999999 776 335  78888775

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.55  E-value=7.2e-14  Score=131.12  Aligned_cols=160  Identities=12%  Similarity=0.090  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ...++.|+.+++++|++  +  ++|+.|+|+|++.++.++ ..+|+.|+.....|.... ..++..|.++..+|.     
T Consensus        84 ~~~~~l~~~la~~~g~~--~--~i~~~sGt~a~~~~~~~~-~~~gd~v~~~~~~~~~~~-~~~~~~g~~~~~~~~-----  152 (384)
T 1bs0_A           84 VVHQALEEELAEWLGYS--R--ALLFISGFAANQAVIAAM-MAKEDRIAADRLSHASLL-EAASLSPSQLRRFAH-----  152 (384)
T ss_dssp             HHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHHHH-HHHHTSSSEEEEECT-----
T ss_pred             HHHHHHHHHHHHHhCCC--c--EEEeCCcHHHHHHHHHHh-CCCCcEEEEcccccHHHH-HHHHHcCCCEEEeCC-----
Confidence            55679999999999984  2  666666699999988877 468888864433332222 234556999888874     


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---c---CCCCCCCc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---L---ALALHRPD  276 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---l---dl~~l~~D  276 (311)
                       ++.++|++.+++..+  .+++|.++..  .+|.++|+++|.+ |+++|+++++|.+|+. |...   .   +.-..++|
T Consensus       153 -~d~~~l~~~l~~~~~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~d  228 (384)
T 1bs0_A          153 -NDVTHLARLLASPCP--GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGT-GVIGEQGRGSCWLQKVKPE  228 (384)
T ss_dssp             -TCHHHHHHHHHSCCS--SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT-TTSSGGGCCHHHHTTCCCS
T ss_pred             -CCHHHHHHHHHhcCC--CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCccc-ceecCCCCchHHhcCCCCc
Confidence             367889888875321  2467666533  5999999999966 7999999999999987 6531   1   11124689


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +++.|+|| ++| |.| |+++.++++.
T Consensus       229 i~~~s~sK-~~~-~~G-G~~~~~~~~~  252 (384)
T 1bs0_A          229 LLVVTFGK-GFG-VSG-AAVLCSSTVA  252 (384)
T ss_dssp             EEEEESSS-TTS-SCC-EEEEECHHHH
T ss_pred             EEEeeccc-hhh-ccC-cEEEeCHHHH
Confidence            99999999 888 888 9999876543

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.55  E-value=3.8e-14  Score=133.02  Aligned_cols=159  Identities=13%  Similarity=0.025  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC-CEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKG-NYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~G-d~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .+.|+.+|+++|+++++  |+||+|+|+++++++.++ ..+| ++|+.. ..|+. . ...++..|.++..+|.+. +..
T Consensus        61 ~~lr~~la~~~~~~~~~--v~~~~G~~~ai~~~~~~~-~~~g~d~Vl~~~p~~~~-~-~~~~~~~g~~~~~v~~~~-~~~  134 (356)
T 1fg7_A           61 KAVIENYAQYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYGM-Y-SVSAETIGVECRTVPTLD-NWQ  134 (356)
T ss_dssp             HHHHHHHHHHHTSCGGG--EEEESHHHHHHHHHHHHH-CCTTTCEEEECSSSCTH-H-HHHHHHHTCEEEECCCCT-TSC
T ss_pred             HHHHHHHHHHhCCChHH--EEEcCCHHHHHHHHHHHH-hCCCCCEEEEeCCChHH-H-HHHHHHcCCEEEEeeCCC-CCC
Confidence            47999999999997654  999999999999999987 4678 888643 34442 2 223344589999998874 556


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH----HHHCCcEEEecccccCccCcc---cCC-CCCCCc
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQ---LAL-ALHRPD  276 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~p---ldl-~~l~~D  276 (311)
                      +|.++|++.++ +     +++|.++..  .||.++|.+++.+    |+ +|+++++|.+|+. ....   .++ ...+.+
T Consensus       135 ~d~~~l~~~i~-~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~-~~~~~~~~~~~~~~~~~  206 (356)
T 1fg7_A          135 LDLQGISDKLD-G-----VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIE-FCPQASLAGWLAEYPHL  206 (356)
T ss_dssp             CCHHHHHTSCT-T-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGG-GSGGGCSGGGTTTCTTE
T ss_pred             CCHHHHHHHhc-C-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchh-hcCCCcHHHHHhhCCCE
Confidence            89999988876 3     466665533  5999999887744    34 8999999999985 3311   232 334678


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      +++.|++| +|| +.|  +|++++++++.
T Consensus       207 i~~~s~sK-~~g-~~G~r~G~~~~~~~~~  233 (356)
T 1fg7_A          207 AILRTLSK-AFA-LAGLRCGFTLANEEVI  233 (356)
T ss_dssp             EEEEESSS-TTC-CGGGCCEEEEECHHHH
T ss_pred             EEEecchH-hhc-CchhhhEEEEeCHHHH
Confidence            99999999 888 557  79999976543

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.55  E-value=2.8e-13  Score=130.41  Aligned_cols=162  Identities=15%  Similarity=0.128  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ...++.|+.+++++|++  +  ++|+.|+|+|+..++.++ ..+|+.|++....|.... ..++..|.++..+|.     
T Consensus       109 ~~~~~l~~~la~~~g~~--~--~i~~~sGs~a~~~al~~l-~~~gd~vl~~~~~h~~~~-~~~~~~g~~~~~~~~-----  177 (427)
T 2w8t_A          109 HDHMEVEQALRDFYGTT--G--AIVFSTGYMANLGIISTL-AGKGEYVILDADSHASIY-DGCQQGNAEIVRFRH-----  177 (427)
T ss_dssp             HHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHH-SCTTCEEEEETTCCHHHH-HHHHHSCSEEEEECT-----
T ss_pred             HHHHHHHHHHHHHhCCC--c--eEEecCcHHHHHHHHHHh-cCCCCEEEECCcccHHHH-HHHHHcCCeeEEeCC-----
Confidence            45678999999999984  2  666777788988887776 468898864433332222 223456888887763     


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l  273 (311)
                       +|.++|++++++.. ...+++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|+. |...         +++.. 
T Consensus       178 -~d~~~le~~l~~~~-~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~-~~~~~~g~~~~~~~~~~~-  253 (427)
T 2w8t_A          178 -NSVEDLDKRLGRLP-KEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM-GFFGPNGRGVYEAQGLEG-  253 (427)
T ss_dssp             -TCHHHHHHHHHTSC-SSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT-TTSSTTSCCHHHHTTCTT-
T ss_pred             -CCHHHHHHHHHhcc-CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchHhhcCCCc-
Confidence             46889999887521 112567776654  5999999999966 6999999999999998 7665         56643 


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++|++++|+|| ++| +.| |+++.++++.+.
T Consensus       254 ~~di~~~s~sK-~~g-~~g-G~v~~~~~l~~~  282 (427)
T 2w8t_A          254 QIDFVVGTFSK-SVG-TVG-GFVVSNHPKFEA  282 (427)
T ss_dssp             CCSEEEEESSS-TTC-SCC-EEEEECCTTGGG
T ss_pred             CCcEEEecchh-hhc-cCC-CEEEeCHHHHHH
Confidence            78999999999 888 778 999999887654

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.55  E-value=7.5e-14  Score=131.73  Aligned_cols=161  Identities=12%  Similarity=0.090  Sum_probs=116.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.|+.+|+++|++  +  .+|+.|+|+|+..++.++ ..+|+.|+.. ..|.. .. ..++..|+++..+|.   
T Consensus        89 ~~~~~~l~~~la~~~g~~--~--~i~~~sGs~a~~~~~~~~-~~~gd~v~~~~~~~~~-~~-~~~~~~g~~~~~~~~---  158 (401)
T 1fc4_A           89 QDSHKELEQKLAAFLGME--D--AILYSSCFDANGGLFETL-LGAEDAIISDALNHAS-II-DGVRLCKAKRYRYAN---  158 (401)
T ss_dssp             BHHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHTTHHHH-CCTTCEEEEETTCCHH-HH-HHHHTSCSEEEEECT---
T ss_pred             cHHHHHHHHHHHHHhCCC--c--EEEeCChHHHHHHHHHHH-cCCCCEEEEcchhHHH-HH-HHHHHcCCceEEECC---
Confidence            455679999999999985  2  556666788999888876 4688888644 44432 22 234567999888763   


Q ss_pred             CcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-c--------cCC
Q 021539          204 DLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-Q--------LAL  270 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-p--------ldl  270 (311)
                         ++.++|++.+++... ..++++|.++..  .+|.++|+++|.+ |+++|+++++|.+|+. |.. +        +++
T Consensus       159 ---~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~-g~~~~~g~~~~~~~~~  234 (401)
T 1fc4_A          159 ---NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAV-GFVGENGRGSHEYCDV  234 (401)
T ss_dssp             ---TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTT-TTSSTTSCCHHHHTTC
T ss_pred             ---CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccc-cccCCCCCccHHHcCC
Confidence               357888888864100 002467766543  6999999999966 7999999999999986 654 2        555


Q ss_pred             CCCCCcEEEEccccCcC-CCCCceEEEEEeCCCC
Q 021539          271 ALHRPDLVLCTLDNNTH-AQPLKITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~-G~P~GiG~L~vr~~~~  303 (311)
                      .. ++|+++.|+|| ++ | |.| |+++.++++.
T Consensus       235 ~~-~~di~~~s~sK-~~~~-~~g-G~~~~~~~~~  264 (401)
T 1fc4_A          235 MG-RVDIITGTLGK-ALGG-ASG-GYTAARKEVV  264 (401)
T ss_dssp             TT-CCSEEEEESSS-TTCS-SSC-EEEEECHHHH
T ss_pred             Cc-CCcEEEecchh-hccC-CCC-EEEEcCHHHH
Confidence            43 68999999999 66 6 667 9999876543

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.54  E-value=6.1e-14  Score=137.82  Aligned_cols=162  Identities=9%  Similarity=-0.067  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEE--eCCHHHHHHHHHhcCCCCCCCEEEEcc--CcCh--HHH-------HHHHHhCCcE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLF--VPNYKEAMLMIGESYPFFKGNYYLTII--SEES--DYI-------KGFAAQKESK  194 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvF--TsnaTealnlv~~s~~~~~Gd~Ils~~--eh~~--~~~-------~~la~~~G~~  194 (311)
                      .++.++++|+++|++.   .++|  |+|+|+|+.+++.++ +++||+|++..  .++.  +.+       ....+..|++
T Consensus        76 ~~~Le~~lA~l~g~e~---alv~p~~~sGt~A~~~al~al-l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~  151 (427)
T 3hvy_A           76 RDSLDRVYANIFNTES---AFVRPHFVNGTHAIGAALFGN-LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVK  151 (427)
T ss_dssp             HHHHHHHHHHHHTCSE---EEEETTCCSHHHHHHHHHHHT-CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCE
T ss_pred             HHHHHHHHHHHhCCCc---eEEeCCCCcHHHHHHHHHHHh-cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCE
Confidence            4577889999999852   3666  889999999999887 68999997554  2321  111       0223456999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhh--ccCCCCCceEEEEec----c--cccchhcHHHHHH-HHH--CCcEEEecccccCc
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFR--RKCKYTPKGLFSYPV----V--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVF  263 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~--~~~~~~~t~LVs~~~----~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~  263 (311)
                      +..++. . ++.+|.++|+++++  ++     +++|.+..    .  .+|.+.|+++|.+ ||+  +|+++++|.+++. 
T Consensus       152 ~~~v~~-~-~~~~d~e~l~~~i~~~~~-----tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~-  223 (427)
T 3hvy_A          152 YKMVDL-K-DGKVDINTVKEELKKDDS-----IKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGE-  223 (427)
T ss_dssp             EEECCC-B-TTBCCHHHHHHHHHHCTT-----EEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCT-
T ss_pred             EEEecC-C-CCCcCHHHHHHHhhCCCC-----CEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccc-
Confidence            999888 3 67899999999998  43     67877755    3  4899999999976 688  8999999999998 


Q ss_pred             cCcccCCCCCCCcEEEEccccCcCCC---CCceEEEEEeCCCC
Q 021539          264 GEDQLALALHRPDLVLCTLDNNTHAQ---PLKITCLLVRRKSF  303 (311)
Q Consensus       264 G~~pldl~~l~~Dfl~~S~HK~l~G~---P~GiG~L~vr~~~~  303 (311)
                      +....+--.+++|+++.|+|| .+|+   |.| |+++.++++.
T Consensus       224 ~~~~~~p~~~gaDiv~~S~sK-~lgg~g~~~G-G~i~~~~~li  264 (427)
T 3hvy_A          224 FVEEKEPTDVGADIIAGSLIK-NIGGGIATTG-GYIAGKEEYV  264 (427)
T ss_dssp             TTSSSCGGGGTCSEEEEETTS-GGGTTTCCSC-EEEEECHHHH
T ss_pred             cccCCCCcccCCeEEEECCcc-cccccccceE-EEEEECHHHH
Confidence            763333334679999999999 7774   433 8887776543

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.54  E-value=4.7e-14  Score=134.32  Aligned_cols=164  Identities=10%  Similarity=-0.082  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHc----CCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHC----GLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.+|+++    |++.+. .+|+||+|+|+|+++++.++ ..+|+.|++ ...|+.  +...++..|.++..+|.+.
T Consensus        78 ~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~  154 (412)
T 2x5d_A           78 PRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPI--HIYGAVIAGAQVRSVPLVP  154 (412)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHH--HHHHHHHHTCEEEEEECST
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchh--HHHHHHHcCCEEEEeecCC
Confidence            47889999998    853221 25999999999999999987 468898864 445542  2223344589999999875


Q ss_pred             CCc-ccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCccC----cccCCC
Q 021539          203 LDL-RIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGE----DQLALA  271 (311)
Q Consensus       203 ~~g-~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~----~pldl~  271 (311)
                      .++ .+|.++|++.++++     +++|.++.  +.||.++|.+   +|.+ |+++|+++++|.+|+. +.    .+.++.
T Consensus       155 ~~~~~~d~~~l~~~i~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~  228 (412)
T 2x5d_A          155 GIDFFNELERAIRESIPK-----PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYAD-IVYDGWKAPSIM  228 (412)
T ss_dssp             TSCHHHHHHHHHHTEESC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGG
T ss_pred             ccCCCCCHHHHHHhcccC-----ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCCCCCChh
Confidence            313 36788898888754     45655542  2599999864   4544 6889999999999997 53    223433


Q ss_pred             C----CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          272 L----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       272 ~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .    .+.|+++.|+|| +|| +.|  +|++++++++.
T Consensus       229 ~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  264 (412)
T 2x5d_A          229 QVPGAKDIAVEFFTLSK-SYN-MAGWRIGFMVGNPELV  264 (412)
T ss_dssp             GSTTGGGTEEEEEECC--CCS-CTTSCCEEEEECHHHH
T ss_pred             hccCccCcEEEEecCcc-ccC-CcccceEEEEcCHHHH
Confidence            3    367899999999 887 456  79999876543

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.54  E-value=1.8e-14  Score=134.60  Aligned_cols=157  Identities=20%  Similarity=0.193  Sum_probs=111.8

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++.|+.+|+++|+++++  |+||+|+|+|+++++.++ +.+||.|+. ...|+.  ....++..|+++..+|.+. +..+
T Consensus        68 ~~lr~~la~~~g~~~~~--i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~v~~~~-~~~~  141 (360)
T 3hdo_A           68 QKLREVAGELYGFDPSW--IIMANGSDEVLNNLIRAF-AAEGEEIGYVHPSYSY--YGTLAEVQGARVRTFGLTG-DFRI  141 (360)
T ss_dssp             HHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCTH--HHHHHHHHTCEEEEECBCT-TSSB
T ss_pred             HHHHHHHHHHhCcCcce--EEEcCCHHHHHHHHHHHH-hCCCCEEEEcCCChHH--HHHHHHHCCCEEEEeeCCC-CCCH
Confidence            48999999999987664  999999999999999987 578999864 444442  2233445699999999865 4444


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccCC-CCCCCcEEEEcc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLAL-ALHRPDLVLCTL  282 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pldl-~~l~~Dfl~~S~  282 (311)
                        +++.+.++       ++++.++..  .+|.++|++++.+ ++++|+++++|.+|+.. |...+++ ...+.++++.|+
T Consensus       142 --~~l~~~~~-------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~  212 (360)
T 3hdo_A          142 --AGFPERYE-------GKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTL  212 (360)
T ss_dssp             --TTCCSSBC-------SSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEES
T ss_pred             --HHHHhhcC-------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecc
Confidence              33322221       346655433  5999999999976 68999999999999831 4333332 224567899999


Q ss_pred             ccCcCCCCCc--eEEEEEeCCC
Q 021539          283 DNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       283 HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +| .+| +.|  +|+++.++++
T Consensus       213 sK-~~g-~~G~r~G~~~~~~~~  232 (360)
T 3hdo_A          213 SK-SYS-LAGMRIGLAIARPEV  232 (360)
T ss_dssp             TT-TTS-CTTSCCEEEECCHHH
T ss_pred             hH-hhc-CCccceeeEeeCHHH
Confidence            99 776 335  7888876544

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.54  E-value=1.6e-13  Score=129.15  Aligned_cols=167  Identities=13%  Similarity=0.048  Sum_probs=120.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC-
Q 021539          125 SIPEIQARNRALKHCGLSEDE-YLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET-  201 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~de-y~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~-  201 (311)
                      ....++.++.+++++|++.+. ..|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+ 
T Consensus        81 ~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~~  157 (407)
T 3nra_A           81 LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA--NRKLVEFFEGEMVPVQLDY  157 (407)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTH--HHHHHHHTTCEEEEEEBCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccc--hHHHHHHcCCEEEEeeccc
Confidence            445567888888888985311 25999999999999999987 57889886 4445552  233455679999999973 


Q ss_pred             ----CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccC----cc
Q 021539          202 ----WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGE----DQ  267 (311)
Q Consensus       202 ----~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~----~p  267 (311)
                          ..++.++.++|++.++++     +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+|+. +.    ..
T Consensus       158 ~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~-~~~~g~~~  231 (407)
T 3nra_A          158 VSADETRAGLDLTGLEEAFKAG-----ARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSR-LRYAGASY  231 (407)
T ss_dssp             CSSCCSSCCBCHHHHHHHHHTT-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-SBCTTCCC
T ss_pred             ccccCcCCCcCHHHHHHHHhhC-----CcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCC
Confidence                125678999999999864     355555433  6999999   667755 6899999999999985 32    22


Q ss_pred             cCCCC-----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          268 LALAL-----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       268 ldl~~-----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ..+..     .+.++++.|++| .|| +.|  +|+++.++++
T Consensus       232 ~~~~~~~~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~  271 (407)
T 3nra_A          232 THLRAEAAVDAENVVTIMGPSK-TES-LSGYRLGVAFGSRAI  271 (407)
T ss_dssp             CCGGGCTTSCGGGEEEEECSSS-TTC-CGGGCCEEEEECHHH
T ss_pred             CChhhcCcccCCcEEEEeCccc-ccC-CCeeeEEEEEcCHHH
Confidence            23322     346799999999 777 335  7888877554

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.53  E-value=4.7e-14  Score=134.38  Aligned_cols=160  Identities=16%  Similarity=0.151  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      ++++  +|+||+|+|+|+++++.++ +.+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        82 ~~l~~~la~~~~~~~g~~~~~~--~v~~~~g~t~a~~~~~~~~-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~  156 (409)
T 2gb3_A           82 WELREAFASYYKRRQRVDVKPE--NVLVTNGGSEAILFSFAVI-ANPGDEILVLEPFYAN--YNAFAKIAGVKLIPVTRR  156 (409)
T ss_dssp             HHHHHHHHHHHHHTSCCCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH--HHHHHHHHTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCCHH--HEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCchh--HHHHHHHcCCEEEEeccC
Confidence            367888888875      4433  5999999999999999987 56889886 4455653  222334458999999986


Q ss_pred             C-CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCc---ccC-C
Q 021539          202 W-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED---QLA-L  270 (311)
Q Consensus       202 ~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~---pld-l  270 (311)
                      . .+..+ .++|++.++++     +++|.++..  .+|.++|   +++|.+ |+++|+++++|.+|+. +..   ++. +
T Consensus       157 ~~~~~~~-~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~  229 (409)
T 2gb3_A          157 MEEGFAI-PQNLESFINER-----TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSE-IVFRGEFASAL  229 (409)
T ss_dssp             GGGTSCC-CTTGGGGCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCSSCCCCGG
T ss_pred             CCCCCcc-HHHHHHhhCcC-----CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccc-cccCCCCCCcc
Confidence            4 12233 67788877653     466655433  5899986   556654 6899999999999987 532   223 3


Q ss_pred             CC-CCCcEEEEccccCcCCCCCc--eEEEEEeC-CC
Q 021539          271 AL-HRPDLVLCTLDNNTHAQPLK--ITCLLVRR-KS  302 (311)
Q Consensus       271 ~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~-~~  302 (311)
                      .. .+.|++++|+|| ++| +.|  +|++++++ ++
T Consensus       230 ~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~l  263 (409)
T 2gb3_A          230 SIESDKVVVIDSVSK-KFS-ACGARVGCLITRNEEL  263 (409)
T ss_dssp             GSCCTTEEEEEESTT-TTT-CGGGCCEEEECSCHHH
T ss_pred             ccCCCCEEEEecchh-ccC-CccceEEEEEECcHHH
Confidence            33 367999999999 888 558  89999887 54

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.53  E-value=4.2e-14  Score=132.28  Aligned_cols=159  Identities=10%  Similarity=-0.018  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .++.|+.+|+++|+++++  |+||+|+|+++++++.++   +|+.|++ ...|+.  +...++..|.++..+|.+..++ 
T Consensus        61 ~~~l~~~la~~~~~~~~~--v~~~~g~~~al~~~~~~~---~gd~vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~-  132 (364)
T 1lc5_A           61 YFHLHQALARHHQVPASW--ILAGNGETESIFTVASGL---KPRRAMIVTPGFAE--YGRALAQSGCEIRRWSLREADG-  132 (364)
T ss_dssp             CHHHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHH---CCSEEEEEESCCTH--HHHHHHHTTCEEEEEECCGGGT-
T ss_pred             HHHHHHHHHHHHCcCHHH--EEECCCHHHHHHHHHHHc---CCCeEEEeCCCcHH--HHHHHHHcCCeEEEEeCCcccc-
Confidence            458999999999997654  999999999999999887   5688763 344443  2233455799999999864212 


Q ss_pred             cC-HHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCccCc----ccCC-CCCC
Q 021539          207 IK-GSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGED----QLAL-ALHR  274 (311)
Q Consensus       207 id-~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~----pldl-~~l~  274 (311)
                      ++ ++++.+.++++     +++|.++.  +.||.++|   +++|.+ |+++|+++++|.+|+. +..    .+++ ...+
T Consensus       133 ~~~l~~~~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~  206 (364)
T 1lc5_A          133 WQLTDAILEALTPD-----LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFID-FIPHETGFIPALKDNP  206 (364)
T ss_dssp             TCCCTTHHHHCCTT-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GSTTCCCSGGGCTTCT
T ss_pred             cchhHHHHHhccCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChh-hccCccchhhHhccCC
Confidence            33 34343444332     45555532  26999999   666655 6899999999999986 432    2332 3457


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEE-EeCCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLL-VRRKS  302 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~-vr~~~  302 (311)
                      .|+++.|+|| ++| +.|  +|+++ .++++
T Consensus       207 ~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  235 (364)
T 1lc5_A          207 HIWVLRSLTK-FYA-IPGLRLGYLVNSDDAA  235 (364)
T ss_dssp             TEEEEEESTT-TTT-CTTTCCEEEECCCHHH
T ss_pred             CEEEEEECch-hhc-CCccceEEEEECCHHH
Confidence            8999999999 887 446  69999 76654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.53  E-value=2.2e-14  Score=140.59  Aligned_cols=165  Identities=9%  Similarity=-0.058  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc--CcChH--HHH------HHHHhCCcEEEE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII--SEESD--YIK------GFAAQKESKVIA  197 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~--eh~~~--~~~------~la~~~G~~V~~  197 (311)
                      .++.++.+++++|++.....|+|+ |+|+|+..++.++ +++||+|++..  .|...  .+.      ..++..|++++.
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al-~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~  144 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGI-LRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA  144 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTT-CCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred             HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHh-CCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence            567889999999996432123366 6799999999887 57899987654  33321  110      122346899999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec----c--cccchhcHHHHHH-HHH--CCcEEEecccccCccCccc
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV----V--VNGTRYSMHWISE-AHR--NAWHVLLDATGLVFGEDQL  268 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~----~--~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G~~pl  268 (311)
                      +|.++ ++.+|.++|+++++++     +++|.+..    .  .+|.+.|+++|.+ |++  +|+++++|.+|+. +....
T Consensus       145 v~~~~-~~~~d~e~l~~~l~~~-----tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~-~~~~~  217 (431)
T 3ht4_A          145 VPLTE-GGLVDFEAVAAAIHSN-----TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGE-FIEEQ  217 (431)
T ss_dssp             CCBCT-TSSBCHHHHHHHCCTT-----EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT-TSSSC
T ss_pred             eCCCC-CCCcCHHHHHhhcCCC-----CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChh-hccCC
Confidence            99876 6889999999999764     57777653    2  4788999999966 688  9999999999998 76444


Q ss_pred             CCCCCCCcEEEEccccCcCCC---CCceEEEEEeCCCC
Q 021539          269 ALALHRPDLVLCTLDNNTHAQ---PLKITCLLVRRKSF  303 (311)
Q Consensus       269 dl~~l~~Dfl~~S~HK~l~G~---P~GiG~L~vr~~~~  303 (311)
                      +...+++|++++|+|| .+|+   |.| |+++.++++.
T Consensus       218 ~~~~~g~Di~~~S~sK-~lgg~~~~~G-G~v~~~~~li  253 (431)
T 3ht4_A          218 EPCHVGADLMAGSLIK-NPGGGIVKTG-GYIVGKEQYV  253 (431)
T ss_dssp             CGGGTTCSEEEEETTS-GGGTTTCSSC-EEEEECHHHH
T ss_pred             CccccCCeEEEcCccc-cCCCCCCCce-EEEEecHHHH
Confidence            4445689999999999 6443   778 9999876543

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.53  E-value=6.7e-14  Score=131.20  Aligned_cols=165  Identities=12%  Similarity=0.033  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          127 PEIQARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       127 ~le~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ...+.|+.+|+++    |++.+.. +|+||+|+|+|+++++.++ ..+|+.|++. ..|+.  ....++..|.++..+|.
T Consensus        64 ~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~~~~  140 (376)
T 2dou_A           64 CTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLAL-TEPEDLLLLPEVAYPS--YFGAARVASLRTFLIPL  140 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCHH--HHHHHHHTTCEEEEECB
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHh-cCCCCEEEECCCCcHh--HHHHHHHcCCEEEEeeC
Confidence            3568999999998    8752212 5999999999999999887 4678988643 33432  22334557999999988


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHH---HHH-HHHCCcEEEecccccCccCc---ccC--
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGED---QLA--  269 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~---pld--  269 (311)
                      + .+..+|.++|++.++++     +++|.++.  +.+|.++|.++   |.+ |+++|+++++|.+|+. +..   +.+  
T Consensus       141 ~-~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~  213 (376)
T 2dou_A          141 R-EDGLADLKAVPEGVWRE-----AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD-QVYEGEAPSPL  213 (376)
T ss_dssp             C-TTSSBCGGGSCHHHHHH-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG-GBSSSCCCCGG
T ss_pred             C-CCCCCCHHHHHHhhccC-----ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCChh
Confidence            3 23457888888888654     46666642  25999999654   444 6899999999999986 421   222  


Q ss_pred             -C-CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          270 -L-ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       270 -l-~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       + ...+.++++.|++| .|| +.|  +|+++.++++.
T Consensus       214 ~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~~  249 (376)
T 2dou_A          214 ALPGAKERVVELFSLSK-SYN-LAGFRLGFALGSEEAL  249 (376)
T ss_dssp             GSTTGGGTEEEEEEHHH-HHT-CGGGCCEEEEECHHHH
T ss_pred             hcCCCCCcEEEEecchh-hcC-ChhheeEEEecCHHHH
Confidence             2 12356899999999 887 446  79998876543

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.53  E-value=3.8e-14  Score=135.44  Aligned_cols=165  Identities=10%  Similarity=-0.012  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHc----CCCCCCC-eEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHC----GLSEDEY-LVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey-~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.+|+++    |++.+.. .|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  ....++..|.++..+|.+.
T Consensus        80 ~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~  156 (429)
T 1yiz_A           80 PRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH-VDEGDEVIIIEPFFDC--YEPMVKAAGGIPRFIPLKP  156 (429)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECBC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCchh--HHHHHHHcCCEEEEEeCCc
Confidence            36777777776    7432222 4999999999999999887 46788886 3444542  1223445699999999865


Q ss_pred             C---------CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---c
Q 021539          203 L---------DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---G  264 (311)
Q Consensus       203 ~---------~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G  264 (311)
                      .         +..++.++|++.++++     +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+|+..   |
T Consensus       157 ~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g  231 (429)
T 1yiz_A          157 NKTGGTISSADWVLDNNELEALFNEK-----TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP  231 (429)
T ss_dssp             CCSSSSEEGGGCBCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT
T ss_pred             ccccccccccCcccCHHHHHHHhccC-----ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCC
Confidence            3         2458999999988653     466665433  5899997   666655 68999999999999841   2


Q ss_pred             C--ccc-CCC-CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          265 E--DQL-ALA-LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       265 ~--~pl-dl~-~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .  .++ .+. ..+.|+++.|+|| .|| +.|  +|++++++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~s~sK-~~~-~~G~r~G~~~~~~~~~  274 (429)
T 1yiz_A          232 FEHIRICTLPGMWERTITIGSAGK-TFS-LTGWKIGWAYGPEALL  274 (429)
T ss_dssp             SCCCCGGGSTTTGGGEEEEEEHHH-HHT-CGGGCCEEEESCHHHH
T ss_pred             CCCcChhhccCCcCceEEEecchh-ccC-CCCcceEEEEeCHHHH
Confidence            2  222 232 3568999999999 888 668  99999876543

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.53  E-value=3.7e-14  Score=148.01  Aligned_cols=169  Identities=13%  Similarity=0.084  Sum_probs=122.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC--
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL--  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~--  203 (311)
                      .+.++|+.+|+++|++.   .++||+|+|+|++.++.++ ..+||.|+ ...+|.+. ....++..|+++++++.+..  
T Consensus       174 ~i~e~e~~lA~~~gae~---~i~v~nGtt~an~~ai~al-~~pGD~VLv~~~~H~S~-~~~~~~l~Ga~~v~v~~~~~~~  248 (730)
T 1c4k_A          174 PAVAAEKHAARVYNADK---TYFVLGGSSNANNTVTSAL-VSNGDLVLFDRNNHKSV-YNSALAMAGGRPVYLQTNRNPY  248 (730)
T ss_dssp             HHHHHHHHHHHHTTCSE---EEEESSHHHHHHHHHHHHH-CCTTCEEEEETTCCHHH-HHHHTTTTCCEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHh-cCCCCEEEEcCCchHHH-HHHHHHHCCCEEEEEeCCcccc
Confidence            46799999999999952   4788888889999998887 47899987 44555532 22214456999888875421  


Q ss_pred             --CcccCHHHH-----Hhhhhcc------CCCCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCcc----
Q 021539          204 --DLRIKGSQL-----SQNFRRK------CKYTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFG----  264 (311)
Q Consensus       204 --~g~id~~~L-----~~~l~~~------~~~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G----  264 (311)
                        .+.+|.++|     +++++++      +. .+.+++.++.- .+|.+.|+++|.+ ||++|+++++|++|+. +    
T Consensus       249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~-~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~-~~~f~  326 (730)
T 1c4k_A          249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWK-RPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVG-YEQFI  326 (730)
T ss_dssp             CCEEEECGGGSCHHHHHHHTTTSSHHHHTCS-CCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCC-GGGSS
T ss_pred             CccCCCCHHHHhhhHHHHHhhcCCccccccc-CCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEccccc-ccccC
Confidence              145788888     8887653      10 11156665533 5899999999966 6999999999999974 2    


Q ss_pred             -----CcccCCCCCCCc----EEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          265 -----EDQLALALHRPD----LVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       265 -----~~pldl~~l~~D----fl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                           ..+++++.+++|    ++++|+|| ++|+|.+.|+++++++.+
T Consensus       327 ~~~~g~~~l~~~~~g~D~~~~iv~~S~hK-~L~g~~~gg~I~v~~~~l  373 (730)
T 1c4k_A          327 PMMRNSSPLLIDDLGPEDPGIIVVQSVHK-QQAGFSQTSQIHKKDSHI  373 (730)
T ss_dssp             GGGGGGCTTSCCCCCTTSCEEEEEECHHH-HSSCCTTCEEEEEECGGG
T ss_pred             cccCCcCcccccccCCCCCCEEEEECCCC-CCCCCCCEEEEEecchhh
Confidence                 123555456788    99999999 666688899999987653

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.53  E-value=5e-14  Score=134.45  Aligned_cols=164  Identities=9%  Similarity=-0.020  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHc----CCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          129 IQARNRALKHC----GLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      .+.|+.+|+++    |++.+ +..|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+.
T Consensus        88 ~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~  164 (404)
T 2o1b_A           88 EAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCV-INPGDYVLLPDPGYTD--YLAGVLLADGKPVPLNLEP  164 (404)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCSS--HHHHHHHTTCEEEEEECCT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHh-cCCCCEEEEcCCCchh--HHHHHHHCCCEEEEeccCc
Confidence            47888999988    87522 135999999999999999987 46788886 3444542  2223445699999999875


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHH---HHHH-HHHCCcEEEecccccCccC---cccCCCCC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGE---DQLALALH  273 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~---~pldl~~l  273 (311)
                      .+..+|.++|++.++++     +++|.++..  .+|.++|.+   +|.+ |+++|+++++|.+|+. +.   .+.++..+
T Consensus       165 ~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~  238 (404)
T 2o1b_A          165 PHYLPDWSKVDSQIIDK-----TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGA-FGFDAKNPSILAS  238 (404)
T ss_dssp             TTCCCCGGGSCHHHHHH-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTT-CBSSSCCCCGGGS
T ss_pred             ccCcCCHHHHHHhhccC-----ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCChhhc
Confidence            23347888898888754     466666432  599999854   5544 6889999999999986 43   23344333


Q ss_pred             ----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          274 ----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       274 ----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                          +.|+++.|+|| +|| +.|  +|+++.++++.
T Consensus       239 ~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~~  272 (404)
T 2o1b_A          239 ENGKDVAIEIYSLSK-GYN-MSGFRVGFAVGNKDMI  272 (404)
T ss_dssp             TTHHHHEEEEEESTT-TTT-CGGGCCEEEEECHHHH
T ss_pred             CCCCCCEEEEEecch-hcc-CchhheEeEecCHHHH
Confidence                46899999999 887 346  79999876543

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.52  E-value=6.2e-14  Score=132.58  Aligned_cols=162  Identities=15%  Similarity=0.078  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .+.|+.+|+++    |++.+...|+||+|+|+|+++++.++ ..+|+.|++. ..|+.  ....++..|+++..+|.+. 
T Consensus        78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~v~~~~-  153 (407)
T 2zc0_A           78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVL-IDPGDVVITENPSYIN--TLLAFEQLGAKIEGVPVDN-  153 (407)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH--HHHHHHTTTCEEEEEEEET-
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHh-cCCCCEEEEeCCChHH--HHHHHHHcCCEEEEcccCC-
Confidence            47888899988    84323335999999999999999987 4688988643 33432  2334456799999999865 


Q ss_pred             CcccCHHHHHhhhh----ccCCCCCceEE-EEecc--cccchhcHH---HHHH-HHHCCcEEEecccccCccCc----cc
Q 021539          204 DLRIKGSQLSQNFR----RKCKYTPKGLF-SYPVV--VNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGED----QL  268 (311)
Q Consensus       204 ~g~id~~~L~~~l~----~~~~~~~t~LV-s~~~~--~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~----pl  268 (311)
                      ++ ++.++|++.++    +..   ++++| +++..  .+|.++|++   +|.+ |+++|+++++|.+|+. +..    ..
T Consensus       154 ~~-~d~~~l~~~l~~~~~~~~---~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~  228 (407)
T 2zc0_A          154 DG-MRVDLLEEKIKELKAKGQ---KVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNF-MRYEGGDIV  228 (407)
T ss_dssp             TE-ECHHHHHHHHHHHHHTTC---CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-SBSSCSSCC
T ss_pred             CC-CCHHHHHHHHHhhhcccC---CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcc-cccCCCCCC
Confidence            45 89999999887    411   24565 45432  599999998   5644 6899999999999987 432    22


Q ss_pred             CCCCC---CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          269 ALALH---RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       269 dl~~l---~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ++..+   +.++++.|++| ++| | |  +|++++++++
T Consensus       229 ~~~~~~~~~~~i~~~s~sK-~~~-~-G~r~G~~~~~~~~  264 (407)
T 2zc0_A          229 PLKALDNEGRVIVAGTLSK-VLG-T-GFRIGWIIAEGEI  264 (407)
T ss_dssp             CGGGGCSSCCEEEEEESTT-TTC-T-TSCCEEEECCHHH
T ss_pred             ChhhcCCCCCEEEEccccc-ccC-C-CcceEEEecCHHH
Confidence            33332   45688999999 888 6 5  8999987654

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.52  E-value=1.2e-13  Score=130.24  Aligned_cols=160  Identities=12%  Similarity=0.053  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ++.|+.+|++++      ++++  +|+||+|+|+|+++++.++ ..+||.|+. ...|+ . ....++..|+++..+|.+
T Consensus        71 ~~lr~~ia~~~~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~~~-~-~~~~~~~~g~~~~~v~~~  145 (391)
T 3h14_A           71 PALRQRIARLYGEWYGVDLDPG--RVVITPGSSGGFLLAFTAL-FDSGDRVGIGAPGYP-S-YRQILRALGLVPVDLPTA  145 (391)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCH-H-HHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCCHH--HEEEecChHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-HHHHHHHcCCEEEEeecC
Confidence            478888888874      5554  4999999999999999987 468898863 33443 2 234455679999999987


Q ss_pred             CC-CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc--cCcccCCCC
Q 021539          202 WL-DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF--GEDQLALAL  272 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~--G~~pldl~~  272 (311)
                      .. +..++.++|++.   +     +++|.+...  .||+++|   +++|.+ |+++|+++++|.+|+..  +..+.++..
T Consensus       146 ~~~~~~~d~~~l~~~---~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  217 (391)
T 3h14_A          146 PENRLQPVPADFAGL---D-----LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE  217 (391)
T ss_dssp             GGGTTSCCHHHHTTS---C-----CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG
T ss_pred             cccCCCCCHHHHHhc---C-----CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh
Confidence            52 125688888766   2     345555432  6999999   555544 68999999999999841  222334333


Q ss_pred             -CCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       .+.++++.|++| .+| +.|  +|+++.++++.
T Consensus       218 ~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~~  249 (391)
T 3h14_A          218 LTDECYVINSFSK-YFS-MTGWRVGWMVVPEDQV  249 (391)
T ss_dssp             TCSSSEEEEESSS-TTC-CTTSCCEEEECCGGGH
T ss_pred             cCCCEEEEEechh-ccC-CccceeEEEEeCHHHH
Confidence             356788889999 887 445  78888876653

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.52  E-value=1.6e-13  Score=130.31  Aligned_cols=161  Identities=15%  Similarity=0.074  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHcC------------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEE
Q 021539          129 IQARNRALKHCG------------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       129 e~aR~~IA~~Lg------------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V  195 (311)
                      .+.|+.+|++++            ++++  +|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|+++
T Consensus        78 ~~lr~~la~~~~~~~~~~~~~~~~~~~~--~v~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~  152 (416)
T 1bw0_A           78 PEAREAVATWWRNSFVHKEELKSTIVKD--NVVLCSGGSHGILMAITAI-CDAGDYALVPQPGFPH--YETVCKAYGIGM  152 (416)
T ss_dssp             HHHHHHHHHHHHHHHCCSTTTGGGCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTH--HHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHHhhhcccccCCCCCCcc--eEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCcHh--HHHHHHHcCcEE
Confidence            478999999998            6555  4999999999999999887 46889886 4455553  223455679999


Q ss_pred             EEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---cC
Q 021539          196 IAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GE  265 (311)
Q Consensus       196 ~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~  265 (311)
                      ..+|.+.. +..+|.++|++.++++     ++++.+...  .+|.++|   +++|.+ |+++|+++++|.+++..   |+
T Consensus       153 ~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~  227 (416)
T 1bw0_A          153 HFYNCRPENDWEADLDEIRRLKDDK-----TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGK  227 (416)
T ss_dssp             EEEEEEGGGTTEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSS
T ss_pred             EEeecCcccCCCCCHHHHHHHhccC-----CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence            99887542 2458999999988754     455555432  6999999   777755 68999999999999851   22


Q ss_pred             ----cccCCCCCC---CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          266 ----DQLALALHR---PDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       266 ----~pldl~~l~---~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                          ...++..+.   .++++.|++| .||.| |  +|+++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~~-Glr~G~~~~~~~  270 (416)
T 1bw0_A          228 DPNATFTSVADFETTVPRVILGGTAK-NLVVP-GWRLGWLLYVDP  270 (416)
T ss_dssp             CTTCCCCCTTSSCCSCCEEEEEESTT-TTSCG-GGCCEEEEEECT
T ss_pred             CCCCCccCHHHccCCCcEEEEecchh-hCCCC-CceEEEEEeeCc
Confidence                223443332   3578889999 77634 6  899999874

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.51  E-value=1.7e-13  Score=129.27  Aligned_cols=162  Identities=10%  Similarity=0.080  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.+|+++    |  ++++  +|+||+|+|+|+++++.++ ..+|+.|++. ..|+.  ....++..|.++..+|.
T Consensus        68 ~~~l~~~la~~l~~~~g~~~~~~--~v~~t~g~~~a~~~~~~~l-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~  142 (399)
T 1c7n_A           68 TEEYKKTVKKWMKDRHQWDIQTD--WIINTAGVVPAVFNAVREF-TKPGDGVIIITPVYYP--FFMAIKNQERKIIECEL  142 (399)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTH--HHHHHHTTTCEEEECCC
T ss_pred             cHHHHHHHHHHHHHHhCCCCChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHh--HHHHHHHcCCEEEeccc
Confidence            346788888875    6  4444  5999999999999999987 4678988743 34442  22334566999988887


Q ss_pred             CCCCc--ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccC
Q 021539          201 TWLDL--RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLA  269 (311)
Q Consensus       201 ~~~~g--~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pld  269 (311)
                      +..++  .++.++|++.++..    ++++|.++..  .+|.++|   +++|.+ |+++|+++++|.+|+..   |..+.+
T Consensus       143 ~~~~g~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~  218 (399)
T 1c7n_A          143 LEKDGYYTIDFQKLEKLSKDK----NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV  218 (399)
T ss_dssp             EEETTEEECCHHHHHHHHTCT----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC
T ss_pred             ccCCCCEEEcHHHHHHHhccC----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc
Confidence            52233  47999999998732    2566666533  5999999   777755 68999999999999861   222345


Q ss_pred             CCCC-----CCcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          270 LALH-----RPDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       270 l~~l-----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +..+     +.++++.|++| .+| +.|  +|++++++
T Consensus       219 ~~~~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~  254 (399)
T 1c7n_A          219 FQSIDEQLADKTITFTAPSK-TFN-IAGMGMSNIIIKN  254 (399)
T ss_dssp             GGGSCHHHHTTEEEEECSHH-HHT-CGGGCCEEEECCC
T ss_pred             HHHcCccccCcEEEEEeChh-hcc-ccchheEEEEECC
Confidence            5433     45689999999 887 457  79999874

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.51  E-value=2.2e-13  Score=133.43  Aligned_cols=160  Identities=10%  Similarity=-0.043  Sum_probs=118.7

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      ++......++.++++|+++|++  .  .++++|+|+|+.+++.++ .++||+|+. ...|+.  ..+...++..|+++..
T Consensus        77 ~r~~~p~~~~le~~lA~l~g~~--~--~v~~~sG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~  151 (430)
T 3ri6_A           77 SRSSNPTVEDLEQRLKNLTGAL--G--VLALGSGMAAISTAILTL-ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRF  151 (430)
T ss_dssp             ---CCHHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHCCC--c--EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence            4444455678999999999984  2  566667789999988877 578999874 444542  2233345667999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+      |+++|+++++++     +++|.+...  .+|.+.|+++|.+ |+++|+++++|.+++. |.. .+...++
T Consensus       152 v~~~------d~~~l~~ai~~~-----t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~-~~~-~~~~~~g  218 (430)
T 3ri6_A          152 VDVM------DSLAVEHACDET-----TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTP-PYL-LEAKRLG  218 (430)
T ss_dssp             ECTT------CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSC-TTT-CCGGGGT
T ss_pred             eCCC------CHHHHHHhhCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-ccc-CChHHcC
Confidence            8874      678899998764     567766433  6999999999976 6999999999999998 865 5555678


Q ss_pred             CcEEEEccccCcCCCC-CceEEEEEe
Q 021539          275 PDLVLCTLDNNTHAQP-LKITCLLVR  299 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P-~GiG~L~vr  299 (311)
                      +|+++.|++| ++|+| .++|.+++.
T Consensus       219 ~div~~S~sK-~l~g~g~~~gG~vv~  243 (430)
T 3ri6_A          219 VDIEVLSSTK-FISGGGTSVGGVLID  243 (430)
T ss_dssp             CSEEEEECCC-EEETTEEECCEEEEE
T ss_pred             CEEEEECCcc-cccCCCCceEEEEEE
Confidence            9999999999 77634 136777763

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.51  E-value=2.8e-13  Score=127.57  Aligned_cols=160  Identities=7%  Similarity=0.012  Sum_probs=114.3

Q ss_pred             HH-HHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          129 IQ-ARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       129 e~-aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .+ .|+.+|+++    |  ++++  +|+||+|+|+|+++++.++ ..+|+.|++ ...|+.  ....++..|.++..+|.
T Consensus        66 ~~~lr~~la~~l~~~~g~~~~~~--~v~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~v~~  140 (390)
T 1d2f_A           66 NDEFLAAIAHWFSTQHYTAIDSQ--TVVYGPSVIYMVSELIRQW-SETGEGVVIHTPAYDA--FYKAIEGNQRTVMPVAL  140 (390)
T ss_dssp             CHHHHHHHHHHHHHHSCCCCCGG--GEEEESCHHHHHHHHHHHS-SCTTCEEEEEESCCHH--HHHHHHHTTCEEEEEEC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCcHH--HHHHHHHCCCEEEEeec
Confidence            35 788888876    6  5444  5999999999999999988 467898864 334442  22334567999999998


Q ss_pred             CCCCc--ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccC
Q 021539          201 TWLDL--RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLA  269 (311)
Q Consensus       201 ~~~~g--~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pld  269 (311)
                      +..++  .++.++|++.+++.    ++++|.++..  .+|.++|   +++|.+ |+++|+++++|.+|+..   |....+
T Consensus       141 ~~~~~~~~~d~~~l~~~l~~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~  216 (390)
T 1d2f_A          141 EKQADGWFCDMGKLEAVLAKP----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP  216 (390)
T ss_dssp             EECSSSEECCHHHHHHHHTST----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC
T ss_pred             ccCCCccccCHHHHHHHhccC----CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC
Confidence            64222  47999999998752    2566655432  5999999   666755 68999999999999861   223345


Q ss_pred             CCCCCC---cEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          270 LALHRP---DLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       270 l~~l~~---Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      +..+..   |. +.|++| ++| +.|  +|++++++
T Consensus       217 ~~~~~~~~~d~-~~s~sK-~~~-~~G~r~G~~~~~~  249 (390)
T 1d2f_A          217 WSNVARGDWAL-LTSGSK-SFN-IPALTGAYGIIEN  249 (390)
T ss_dssp             GGGTCCSSEEE-EECSHH-HHT-CGGGCCEEEEECS
T ss_pred             HHHcchhhHhh-ccCccH-hhc-ccChhheEEEECC
Confidence            444433   77 999999 887 557  69999863

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.51  E-value=1.2e-13  Score=129.54  Aligned_cols=163  Identities=12%  Similarity=0.044  Sum_probs=114.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.|+.+|+++|++  + .|++| |+|+|+..++.++ +.+|+.|+.. ..|. . +...++..|.++..+|..  
T Consensus        87 ~~~~~~l~~~la~~~~~~--~-~i~~~-sGt~a~~~~l~~~-~~~gd~v~~~~~~~~-~-~~~~~~~~g~~~~~~~~~--  157 (399)
T 3tqx_A           87 QTIHKELEKDISEFLGTD--D-TILYS-SCFDANGGLFETL-LGPEDAIISDELNHA-S-IIDGIRLCKAQRYRYKNN--  157 (399)
T ss_dssp             BHHHHHHHHHHHHHHTCS--E-EEEES-CHHHHHHTTHHHH-CCTTCEEEEETTCCH-H-HHHHHHSCCSEEEEECTT--
T ss_pred             chHHHHHHHHHHHHHCCC--c-EEEEC-chHHHHHHHHHHh-cCCCCEEEECCcccH-H-HHHHHHHcCCceeEeCCC--
Confidence            445679999999999984  2 35554 5588998888776 4688988744 3443 2 223455678998888753  


Q ss_pred             CcccCHHHHHhhhhccCC-CCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC------CCC-
Q 021539          204 DLRIKGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA------LAL-  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld------l~~-  272 (311)
                          +.++|++.+++... ..++++|.++..  .+|.++|+++|.+ |+++|+++++|.+|+. |...-+      ... 
T Consensus       158 ----d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~  232 (399)
T 3tqx_A          158 ----AMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV-GFIGENGRGTPEYCGV  232 (399)
T ss_dssp             ----CTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT-TTSSTTSCCHHHHHTC
T ss_pred             ----CHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchHHhhCC
Confidence                45678787775210 012567776544  6999999999966 6999999999999986 653322      111 


Q ss_pred             -CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                       .++|+++.|+|| ++|+|.| |+++.+++..
T Consensus       233 ~~~~di~~~s~sK-~~~g~~g-G~~~~~~~~~  262 (399)
T 3tqx_A          233 ADRVDILTGTLGK-ALGGASG-GYTSGHKEII  262 (399)
T ss_dssp             TTCCSEEEEESSS-SSCSSCC-EEEEECHHHH
T ss_pred             CCCCcEEEecchH-hcccCce-EEEEcCHHHH
Confidence             267999999999 6655778 9988876543

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.51  E-value=2.6e-13  Score=130.55  Aligned_cols=162  Identities=16%  Similarity=0.038  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHcC-----CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          128 EIQARNRALKHCG-----LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       128 le~aR~~IA~~Lg-----a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      ..+.|+.+|++++     ++++  +|+||+|+|+|+++++..+ .++|+.|+ ....++.  ....++..|.++..+|.+
T Consensus        98 ~~~lr~~la~~~~~~~~~~~~~--~v~~t~g~t~al~~~~~~l-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~  172 (427)
T 3dyd_A           98 FLSSREEIASYYHCPEAPLEAK--DVILTSGCSQAIDLCLAVL-ANPGQNILVPRPGFSL--YKTLAESMGIEVKLYNLL  172 (427)
T ss_dssp             CHHHHHHHHHHHCBTTBCCCGG--GEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCTH--HHHHHHHTTCEEEEEEEE
T ss_pred             cHHHHHHHHHHHhhcCCCCChH--HEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCchh--HHHHHHHcCCEEEEEecc
Confidence            3489999999999     6555  4999999999999999987 46789886 3334442  233455679999998875


Q ss_pred             C-CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc---cCcccCCC
Q 021539          202 W-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF---GEDQLALA  271 (311)
Q Consensus       202 ~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~  271 (311)
                      . .+..++.++|++.++++     +++|.+...  .||.++|   +++|.+ |+++|+++++|.+++..   |....++.
T Consensus       173 ~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~  247 (427)
T 3dyd_A          173 PEKSWEIDLKQLEYLIDEK-----TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLA  247 (427)
T ss_dssp             GGGTTEECHHHHHSSCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGG
T ss_pred             cccCCCCCHHHHHHHhccC-----CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHH
Confidence            3 24468999999988754     456555433  6999999   777765 69999999999999852   23334444


Q ss_pred             CCCCc---EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          272 LHRPD---LVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       272 ~l~~D---fl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      .++.|   +++.|++| .|| ..|  +|+++++++
T Consensus       248 ~~~~~~~vi~~~S~sK-~~~-~~G~riG~~~~~~~  280 (427)
T 3dyd_A          248 TLSTDVPILSCGGLAK-RWL-VPGWRLGWILIHDR  280 (427)
T ss_dssp             GGCSSCCEEEEEESTT-TSS-CGGGCCEEEEEECS
T ss_pred             HhCCCCcEEEEeeccc-cCC-CcCcceEEEEecCc
Confidence            44444   66779999 777 346  899998853

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.51  E-value=4.2e-14  Score=133.49  Aligned_cols=160  Identities=13%  Similarity=0.044  Sum_probs=110.3

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HHHH-HHhCCcEEEEEeCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IKGF-AAQKESKVIAAPETW  202 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~~l-a~~~G~~V~~vp~~~  202 (311)
                      ..+.+|+.+++++|++++  .|+||+| |+|+..++.++ +++||.|+ ....|....  ...+ ....++.+..++.+.
T Consensus        77 ~~~~~~~~la~~~~~~~~--~v~~~sG-s~a~~~a~~~~-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  152 (420)
T 3gbx_A           77 VEQLAIDRAKELFGADYA--NVQPHSG-SQANFAVYTAL-LQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDE  152 (420)
T ss_dssp             HHHHHHHHHHHHHTCSEE--ECCCSSH-HHHHHHHHHHH-CCTTCEEEEEEEC------------CHHHHSEEEEEEECT
T ss_pred             HHHHHHHHHHHHhCCCCc--eeEecCc-HHHHHHHHHHh-cCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCc
Confidence            345789999999999653  3556655 89999888877 57899986 444554311  1111 111134555566663


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----ccCCCCCCCc
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----QLALALHRPD  276 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----pldl~~l~~D  276 (311)
                       ++.+|.++|+++++++    ++++|.+....+|+..|+++|.+ |+++|+++++|.+|+. |..     +..+.  .+|
T Consensus       153 -~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~--~~d  224 (420)
T 3gbx_A          153 -SGKIDYDEMAKLAKEH----KPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVA-GLIAAGVYPNPVP--HAH  224 (420)
T ss_dssp             -TCSCCHHHHHHHHHHH----CCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTH-HHHHTTSSCCSTT--TSS
T ss_pred             -cCCcCHHHHHHHHHhc----CCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcch-hceecccCCcccc--cCC
Confidence             6779999999999863    14566654335788999999966 6999999999999986 654     33343  489


Q ss_pred             EEEEccccCcCCCCCceEEEEEeC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ++++|+|| ++|+|.| |+++.++
T Consensus       225 i~~~s~sK-~~~g~~g-g~~~~~~  246 (420)
T 3gbx_A          225 VVTTTTHK-TLAGPRG-GLILAKG  246 (420)
T ss_dssp             EEEEESSG-GGCSCSC-EEEEESS
T ss_pred             EEEeeccc-CCCCCCc-eEEEEcC
Confidence            99999999 6644887 8888776

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.50  E-value=2e-14  Score=135.97  Aligned_cols=161  Identities=12%  Similarity=0.124  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      .+.|+.+|+++|++++  +|+||+|+|+|+++++.++ ..+|+.|++ ...|+.  ....++..|.++..+|.+. ++ +
T Consensus        77 ~~l~~~la~~~g~~~~--~v~~~~g~~~al~~~~~~~-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~-~~-~  149 (397)
T 2zyj_A           77 APLRAFVAEWIGVRPE--EVLITTGSQQALDLVGKVF-LDEGSPVLLEAPSYMG--AIQAFRLQGPRFLTVPAGE-EG-P  149 (397)
T ss_dssp             HHHHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCHH--HHHHHHTTCCEEEEEEEET-TE-E
T ss_pred             HHHHHHHHHHhCCChh--hEEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH--HHHHHHHcCCEEEecCcCC-CC-C
Confidence            4799999999998655  4999999999999999887 467898864 334442  2234556799999999865 45 8


Q ss_pred             CHHHHHhhhhccCCCCCceEE-EEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCccC----cccCCCCCCCc
Q 021539          208 KGSQLSQNFRRKCKYTPKGLF-SYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGE----DQLALALHRPD  276 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LV-s~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~----~pldl~~l~~D  276 (311)
                      +.++|++.+++.    ++++| +++.  +.||.++|.+   +|.+ |+++|+++++|.+|+. +.    .+.++..++.|
T Consensus       150 d~~~l~~~l~~~----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~  224 (397)
T 2zyj_A          150 DLDALEEVLKRE----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRE-LYFGEARLPSLFELARE  224 (397)
T ss_dssp             CHHHHHHHHHHC----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCSSCCCCCHHHHHHH
T ss_pred             CHHHHHHHHhhc----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCccc-ccCCCCCCCchhhhCcc
Confidence            999999999762    13454 4443  3699999987   4544 6889999999999987 42    23444444333


Q ss_pred             ------EEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          277 ------LVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       277 ------fl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                            +++.|+|| ++| | .++|++++++++.
T Consensus       225 ~~~~~~i~~~s~sK-~~~-~G~r~G~~~~~~~~~  256 (397)
T 2zyj_A          225 AGYPGVIYLGSFSK-VLS-PGLRVAFAVAHPEAL  256 (397)
T ss_dssp             HTCCCEEEEEESTT-TTC-GGGCCEEEECCHHHH
T ss_pred             cCCCeEEEEecccc-ccc-ccceeEEEecCHHHH
Confidence                  89999999 888 6 2479999876543

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.49  E-value=3.5e-14  Score=133.73  Aligned_cols=163  Identities=11%  Similarity=-0.013  Sum_probs=111.3

Q ss_pred             HHH-HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HHHHHHhCCc--EEEEEeC
Q 021539          127 PEI-QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IKGFAAQKES--KVIAAPE  200 (311)
Q Consensus       127 ~le-~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~~la~~~G~--~V~~vp~  200 (311)
                      .++ .+|+.+++++|++++   .+|+.|+|+|+++++.++ +.+|+.|+ ....|+...  .. .++..|.  ....+++
T Consensus        69 ~~e~~ar~~la~~~g~~~~---~i~~~sGt~a~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  143 (407)
T 2dkj_A           69 RVESLAIERAKALFGAAWA---NVQPHSGSQANMAVYMAL-MEPGDTLMGMDLAAGGHLTHGS-RVNFSGKLYKVVSYGV  143 (407)
T ss_dssp             HHHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCGGGTC-TTSHHHHHSEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCCcc---eEEecchHHHHHHHHHHh-cCCCCEEEEecccccCccchHH-HHHhcCceEEEEecCC
Confidence            444 589999999999642   455555677999999887 57889886 444554210  11 0111233  3334443


Q ss_pred             CCCCcccCHHHHHhhhhc-cCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC---CCC
Q 021539          201 TWLDLRIKGSQLSQNFRR-KCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL---HRP  275 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~-~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~---l~~  275 (311)
                      +..++.++.++|++.+++ +     +++|.++...+|.+.|+++|.+ |+++|+++++|++|+. |....+...   ..+
T Consensus       144 ~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~~~~~~~~~~~  217 (407)
T 2dkj_A          144 RPDTELIDLEEVRRLALEHR-----PKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFA-GLVAAGLHPNPLPYA  217 (407)
T ss_dssp             CTTTSSCCHHHHHHHHHHHC-----CSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHTTCSCCCTTTC
T ss_pred             CcccCccCHHHHHHHHhhcC-----CeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccc-cccccCccCCccccc
Confidence            422567899999999975 3     4566663224789999999966 6999999999999997 665444221   138


Q ss_pred             cEEEEccccCcCCCCCceEEEEEe-CCC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVR-RKS  302 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr-~~~  302 (311)
                      |++++|+|||+.| |.| |+++++ +++
T Consensus       218 di~~~s~sK~l~g-~~~-G~~~~~~~~~  243 (407)
T 2dkj_A          218 HVVTSTTHKTLRG-PRG-GLILSNDPEL  243 (407)
T ss_dssp             SEEEEESSGGGCC-CSC-EEEEESCHHH
T ss_pred             cEEEEeccccCCC-CCc-eEEEECCHHH
Confidence            9999999995545 877 999998 454

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.49  E-value=4.9e-14  Score=132.97  Aligned_cols=163  Identities=12%  Similarity=0.013  Sum_probs=111.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEE-EccCcChHHHHHHHHhCCcE-------
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYL-TIISEESDYIKGFAAQKESK-------  194 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Il-s~~eh~~~~~~~la~~~G~~-------  194 (311)
                      .....++.|+.+++++|++++  .|+||+|+|+|+++++.++. +.+|+.|+ ....+|...... .+..|.+       
T Consensus        85 ~~~~~~~l~~~la~~~~~~~~--~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~-~~~~g~~~~~~~~~  161 (395)
T 1vef_A           85 PTPMRGEFYRTLTAILPPELN--RVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGS-LSVTWEPKYREPFL  161 (395)
T ss_dssp             CCHHHHHHHHHHHHTSCTTEE--EEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHH-HHTCCCHHHHGGGC
T ss_pred             CCHHHHHHHHHHHHhcCCCcC--EEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhh-hhhcCCcccccccC
Confidence            345667999999999988654  49999999999999887641 23567765 444444211111 1122332       


Q ss_pred             -----EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEeccccc-
Q 021539          195 -----VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGL-  261 (311)
Q Consensus       195 -----V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-  261 (311)
                           +..+|.      .|.++|++.++++     +++|.+...  .||.++|    +++|.+ |+++|+++++|.+|+ 
T Consensus       162 p~~~~~~~~~~------~d~~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~  230 (395)
T 1vef_A          162 PLVEPVEFIPY------NDVEALKRAVDEE-----TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTG  230 (395)
T ss_dssp             SCSSCEEEECT------TCHHHHHHHCCTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             CCCCCeeEeCC------CcHHHHHHHhccC-----EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccC
Confidence                 333332      3688999888753     577777654  4899998    999966 699999999999999 


Q ss_pred             CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          262 VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       262 v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      + +..    +++.....+|++  |++| ++|++.++|++++++++.+
T Consensus       231 ~-~~~g~~~~~~~~~~~~d~~--s~sK-~~~~g~~~G~~~~~~~~~~  273 (395)
T 1vef_A          231 M-GRTGKRFAFEHFGIVPDIL--TLAK-ALGGGVPLGVAVMREEVAR  273 (395)
T ss_dssp             T-TTTSSSSTHHHHTCCCSEE--EECG-GGGTTSSCEEEEEEHHHHH
T ss_pred             C-ccCCchhHhhhcCCCCCEE--EEcc-cccCCCceEEEEehHHHHh
Confidence            5 533    233334568988  5599 5554678999999876433

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.49  E-value=3.5e-13  Score=140.95  Aligned_cols=168  Identities=9%  Similarity=-0.044  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL-  203 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~-  203 (311)
                      ..+.++|+.+++++|++ +  .++||+|+|+|+++++.++ ..+||.|+ ...+|.+. ... +...|+++++++.+.. 
T Consensus       205 g~v~~~ee~la~l~G~d-~--~i~~~~Gtt~a~~~~i~al-~~~GD~Vlv~~~~h~s~-~~~-~~~~G~~~v~v~~~~~~  278 (755)
T 2vyc_A          205 GAFGESEKYAARVFGAD-R--SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSI-EQG-LMLTGAKPVYMVPSRNR  278 (755)
T ss_dssp             HHHHHHHHHHHHHHTCS-E--EEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHHH-HHH-HHHHCCEEEEECCCBCT
T ss_pred             cHHHHHHHHHHHHhCCC-c--eEEECCcHHHHHHHHHHHh-cCCCCEEEECCCchHHH-HHH-HHHcCCEEEEEeCCCCc
Confidence            34568999999999985 2  4788888899999999887 47899986 45555532 222 2335999999987542 


Q ss_pred             ---Cccc-----CHHHHHhhhhccCC-----CCCceEEEEecc-cccchhcHHHHHH-HHHCCcEEEecccccCccCc--
Q 021539          204 ---DLRI-----KGSQLSQNFRRKCK-----YTPKGLFSYPVV-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--  266 (311)
Q Consensus       204 ---~g~i-----d~~~L~~~l~~~~~-----~~~t~LVs~~~~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--  266 (311)
                         .+.+     |.++|++++++..+     ...++++.++.- .+|.++|+++|.+ ||++|+++++|++|+. +..  
T Consensus       279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~-~~~~~  357 (755)
T 2vyc_A          279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYG-YARFN  357 (755)
T ss_dssp             TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCT-TGGGC
T ss_pred             cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCch-hcccC
Confidence               1345     89999999975211     011235555433 5899999999976 6999999999999974 311  


Q ss_pred             cc--CCCC-CC--CcE------EEEccccCcCCCCCceEEEEEeCC
Q 021539          267 QL--ALAL-HR--PDL------VLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       267 pl--dl~~-l~--~Df------l~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +.  +... .+  +|+      +++|+|| ++++|.|.|+++++++
T Consensus       358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK-~L~g~~~g~~i~~~~~  402 (755)
T 2vyc_A          358 PIYADHYAMRGEPGDHNGPTVFATHSTHK-LLNALSQASYIHVREG  402 (755)
T ss_dssp             GGGTTSSSSCSCCCCCSSBEEEEEEETTT-SSSCCTTCEEEEEECC
T ss_pred             cccCCcchhcCCcCCccCCCeEEEECccc-cccCcCCeeeeeecCc
Confidence            11  1222 34  687      9999999 5655989999999876

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.49  E-value=1.9e-13  Score=126.34  Aligned_cols=164  Identities=13%  Similarity=0.110  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHH-HHHHHhCCcEEEEEeCCCCC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYI-KGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~-~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...+.|+.+|+++|++    .++||+|+|+|+.+++.++ .++||+|+. ...|....- ...++..|+++..+ .++ +
T Consensus        39 ~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~  111 (347)
T 1jg8_A           39 TINELERLAAETFGKE----AALFVPSGTMGNQVSIMAH-TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK-N  111 (347)
T ss_dssp             HHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHH-CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE-T
T ss_pred             HHHHHHHHHHHHhCCc----eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCC-C
Confidence            3458899999999984    3889999999998888776 468999864 344432110 11344568888888 443 6


Q ss_pred             cccCHHHHHhhhhccC-CCCCceEEEEecc--cc-cchhcHHH---HHH-HHHCCcEEEecccccCccC---cccCCCC-
Q 021539          205 LRIKGSQLSQNFRRKC-KYTPKGLFSYPVV--VN-GTRYSMHW---ISE-AHRNAWHVLLDATGLVFGE---DQLALAL-  272 (311)
Q Consensus       205 g~id~~~L~~~l~~~~-~~~~t~LVs~~~~--~t-G~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~---~pldl~~-  272 (311)
                      +.+|.++|++++++.. ...++++|.+...  .+ |+++|+++   |.+ |+++|+++++|++|.. +.   ...++.. 
T Consensus       112 ~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~-~~~~~~~~~~~~~  190 (347)
T 1jg8_A          112 GAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIF-NASIASGVPVKEY  190 (347)
T ss_dssp             TEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHH-HHHHHHCCCHHHH
T ss_pred             CccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhh-cchhhcCCChHHh
Confidence            6789999999987410 0012677776533  47 99998754   434 5889999999999855 32   2233322 


Q ss_pred             -CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          273 -HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       273 -l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                       ..+|++++|+|| ++|.|.| |+++.++
T Consensus       191 ~~~~d~~~~s~sK-~l~~~~G-~~~~~~~  217 (347)
T 1jg8_A          191 AGYADSVMFCLSK-GLCAPVG-SVVVGDR  217 (347)
T ss_dssp             HHTCSEEEEESSS-TTCCSSC-EEEEECH
T ss_pred             cccccEEEEeccc-ccCCCce-EEEEcCH
Confidence             268999999999 6775643 2444444

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.48  E-value=4.5e-14  Score=134.14  Aligned_cols=163  Identities=9%  Similarity=0.065  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      ++++ .+|+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        70 ~~lr~~la~~~~~~~g~~~~~~-~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~  145 (422)
T 3fvs_A           70 PPLTKILASFFGELLGQEIDPL-RNVLVTVGGYGALFTAFQAL-VDEGDEVIIIEPFFDC--YEPMTMMAGGRPVFVSLK  145 (422)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCHH-HHEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECB
T ss_pred             HHHHHHHHHHHHHhhCCCCCCC-CcEEEECChHHHHHHHHHHH-cCCCCEEEEcCCCchh--hHHHHHHcCCEEEEEecc
Confidence            367777777776      5441 25999999999999999887 57889876 4444543  223445679999999986


Q ss_pred             C-----------CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCc-
Q 021539          202 W-----------LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVF-  263 (311)
Q Consensus       202 ~-----------~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~-  263 (311)
                      .           .+..++.++|++.++++     +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+|+.. 
T Consensus       146 ~~~~~~G~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  220 (422)
T 3fvs_A          146 PGPIQNGELGSSSNWQLDPMELAGKFTSR-----TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMV  220 (422)
T ss_dssp             CCCCCSSSCCBGGGSBCCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred             cccccccccccccCCCCCHHHHHhhcCCC-----ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhc
Confidence            4           12257999999988754     566665433  6999995   666655 68999999999999851 


Q ss_pred             --cCcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          264 --GEDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       264 --G~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                        |+.+.++..+    +.++++.|++| .|| +.|  +|+++.++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~i~~~S~sK-~~g-~~G~r~G~~~~~~~~  265 (422)
T 3fvs_A          221 YDGHQHISIASLPGMWERTLTIGSAGK-TFS-ATGWKVGWVLGPDHI  265 (422)
T ss_dssp             CTTCCCCCGGGSTTTGGGEEEEEEHHH-HHT-CGGGCCEEEECCHHH
T ss_pred             cCCCCCCChhhcccccCcEEEEecchh-ccC-CccceEEEEEeCHHH
Confidence              3333444333    34599999999 887 446  8998887654

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.48  E-value=1.2e-13  Score=128.95  Aligned_cols=160  Identities=13%  Similarity=0.076  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-C-C---CCC-CEEE-EccCcCh--HHHHHHHH----hCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-P-F---FKG-NYYL-TIISEES--DYIKGFAA----QKES  193 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~-~---~~G-d~Il-s~~eh~~--~~~~~la~----~~G~  193 (311)
                      ...+.|+.+|+++|+ ++  .|+||+|+|+|+++++... . .   .+| ++|+ ...++|.  ..+..+..    ..|.
T Consensus        71 ~~~~l~~~la~~~g~-~~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~  147 (375)
T 2eh6_A           71 WQEELAHKLVKHFWT-EG--KVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGF  147 (375)
T ss_dssp             HHHHHHHHHHHTSSS-CE--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTT
T ss_pred             HHHHHHHHHHhhcCC-CC--eEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCC
Confidence            456889999999998 33  5999999999999887642 0 1   457 7876 4444442  22222110    0122


Q ss_pred             E-----EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEeccccc
Q 021539          194 K-----VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       194 ~-----V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs  261 (311)
                      .     +..+|.      .|.++|++.++++     +++|.+...  .+|.++|    +++|.+ |+++|+++++|.+|+
T Consensus       148 ~~~~~~~~~~~~------~d~~~l~~~l~~~-----~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~  216 (375)
T 2eh6_A          148 EPLVPGFSYAKL------NDIDSVYKLLDEE-----TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT  216 (375)
T ss_dssp             CSCCSSEEEECT------TCHHHHHTTCCTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred             CCCCCCceeCCC------chHHHHHHHhcCC-----eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc
Confidence            2     333432      3688898888753     567766544  5899988    889866 699999999999999


Q ss_pred             -CccCcc--cCCCCCC--CcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          262 -VFGEDQ--LALALHR--PDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       262 -v~G~~p--ldl~~l~--~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                       + |..+  +++..++  +|+++||  | .+|++.++|++++++++.+
T Consensus       217 ~~-~~~~~~~~~~~~~~~~d~~s~S--K-~~~~g~~~G~~~~~~~~~~  260 (375)
T 2eh6_A          217 GI-GRTGEFYAYQHFNLKPDVIALA--K-GLGGGVPIGAILAREEVAQ  260 (375)
T ss_dssp             TT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTTSCCEEEEEEHHHHT
T ss_pred             CC-CCCCcchhhhhcCCCCCEEEEc--c-cccCCCCeEEEEEcHHHHh
Confidence             7 7544  4455555  9999998  8 4554778999999876544

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.48  E-value=6.5e-13  Score=128.03  Aligned_cols=162  Identities=12%  Similarity=0.025  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC---
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL---  203 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~---  203 (311)
                      ...+.|+.+|+++|.+    .++||+|+|+|+++++.++ +.+|| ++....|+.... ..++..|.++..++++..   
T Consensus        76 ~~~~l~~~la~~~~~~----~~~~~~~gt~a~~~al~~l-~~~gd-i~~~~~~~~~~~-~~~~~~G~~~~~v~~~~~~~~  148 (456)
T 2ez2_A           76 NFYHLERTVQELFGFK----HIVPTHQGRGAENLLSQLA-IKPGQ-YVAGNMYFTTTR-YHQEKNGAVFVDIVRDEAHDA  148 (456)
T ss_dssp             HHHHHHHHHHHHHCCS----EEEEESSHHHHHHHHHHHH-CCTTC-EEEESSCCHHHH-HHHHHTTCEEEECBCGGGGCT
T ss_pred             hHHHHHHHHHHHhCCC----cEEEeCCcHHHHHHHHHHh-CCCCC-EeccccccchhH-HHHHHcCCEEEEecccccccc
Confidence            4568999999999974    3999999999999999887 57889 877777754322 234456999998887621   


Q ss_pred             ------CcccCHHHHHhhhhccCCCCCceEEEE--ecc-cccchhc---HHHHHH-HHHCCcEEEecccccCcc------
Q 021539          204 ------DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVV-VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFG------  264 (311)
Q Consensus       204 ------~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~-~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G------  264 (311)
                            ++.+|.++|++.++++++ ...++|.+  +++ .+|.++|   +++|.+ |+++|+++++|.+|+. |      
T Consensus       149 ~~~~~~~~~~d~~~l~~~i~~~t~-~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~-g~~~~~~  226 (456)
T 2ez2_A          149 GLNIAFKGDIDLKKLQKLIDEKGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCV-ENAYFIK  226 (456)
T ss_dssp             TCCCSCTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHH-HHHHHHH
T ss_pred             cccccccCCCCHHHHHHHHHhccc-cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccc-ccccccc
Confidence                  256899999999986521 01255555  344 5899988   777755 6999999999999987 6      


Q ss_pred             -----CcccCCC------CCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          265 -----EDQLALA------LHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       265 -----~~pldl~------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                           .....+.      ...+|++++|+|| ++|.| ..|+++.+
T Consensus       227 ~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk-~~~~~-~gG~~~~~  270 (456)
T 2ez2_A          227 EQEQGFENKSIAEIVHEMFSYADGCTMSGKK-DCLVN-IGGFLCMN  270 (456)
T ss_dssp             HHSTTCTTSCHHHHHHHHHTTCSEEEEETTT-TTCCS-SCEEEEES
T ss_pred             ccccccCCcchhhhhhhhcccCCEEEEeCcc-cCCCC-ceeEEEEC
Confidence                 1112210      1247999999999 77733 36777763

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.48  E-value=2.6e-13  Score=126.51  Aligned_cols=156  Identities=10%  Similarity=0.078  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      +++++  |+||+|+|+|+++++.++ ..+|+.|+ ....|+.  +...++..|.++..+|.+
T Consensus        61 ~~lr~~la~~~~~~~~~~~~~~~--i~~t~g~~~a~~~~~~~~-~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~  135 (377)
T 3fdb_A           61 SLLSQATAEFYADRYGYQARPEW--IFPIPDVVRGLYIAIDHF-TPAQSKVIVPTPAYPP--FFHLLSATQREGIFIDAT  135 (377)
T ss_dssp             CCHHHHHHHHHHHHHCCCCCGGG--EEEESCHHHHHHHHHHHH-SCTTCCEEEEESCCTH--HHHHHHHHTCCEEEEECT
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHH--EEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCcHh--HHHHHHHcCCEEEEccCC
Confidence            368888888887      66554  999999999999999887 46788876 4445553  223344559999999997


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHH---HH-HHHCCcEEEecccccCc---c-CcccCCC
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---G-EDQLALA  271 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G-~~pldl~  271 (311)
                      . +  ++.++|++.++++     ++++.++..  .+|.++|.+++   .+ |+++|+++++|.+|+..   | +.+.++.
T Consensus       136 ~-~--~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~  207 (377)
T 3fdb_A          136 G-G--INLHDVEKGFQAG-----ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGV  207 (377)
T ss_dssp             T-S--CCHHHHHHHHHTT-----CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGS
T ss_pred             C-C--CCHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHH
Confidence            5 3  8999999999865     345555432  69999987655   33 58999999999999851   1 2233443


Q ss_pred             C---CCCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          272 L---HRPDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       272 ~---l~~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      .   .+.++++.|++| .+| +.|  +|++++.
T Consensus       208 ~~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~  238 (377)
T 3fdb_A          208 SDTAASVCITITAPSK-AWN-IAGLKCAQIIFS  238 (377)
T ss_dssp             CHHHHHHEEEEECSTT-TTT-CGGGCCEEEECC
T ss_pred             HccCCCcEEEEEeChH-hcc-CcchhheEEEeC
Confidence            2   234599999999 776 345  7877763

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.47  E-value=2.5e-13  Score=129.93  Aligned_cols=164  Identities=10%  Similarity=0.056  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEe
Q 021539          129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      .+.|+.+|++++        ++++.  |+||+|+|+++++++.++ ..+|+.|+. ...|+. ....++...|+++..+|
T Consensus        86 ~~lr~~la~~~~~~~g~~~~~~~~~--i~~~~G~~~ai~~~~~~~-~~~gd~Vl~~~p~y~~-~~~~~~~~~g~~~~~v~  161 (428)
T 1iay_A           86 PEFRKAIAKFMEKTRGGRVRFDPER--VVMAGGATGANETIIFCL-ADPGDAFLVPSPYYPA-FNRDLRWRTGVQLIPIH  161 (428)
T ss_dssp             HHHHHHHHHHHHHHTTTCSCCCTTS--CEEEEHHHHHHHHHHHHH-CCTTCEEEEESSCCTT-HHHHTTTTTCCEEEEEC
T ss_pred             HHHHHHHHHHHHHhcCCCCCCChhh--EEEccChHHHHHHHHHHh-CCCCCeEEEccCCCcc-hHHHHHHhcCCEEEEee
Confidence            368888999887        65554  999999999999999887 368898864 444553 22223334699999999


Q ss_pred             CCCC-CcccCHHHHHhhhhccC-CCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCccC----cc
Q 021539          200 ETWL-DLRIKGSQLSQNFRRKC-KYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGE----DQ  267 (311)
Q Consensus       200 ~~~~-~g~id~~~L~~~l~~~~-~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~----~p  267 (311)
                      .+.. +..++.++|++.+++.. ...++++|.++.  +.+|.++|   +++|.+ |+++|+++++|.+|+. +.    ..
T Consensus       162 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~  240 (428)
T 1iay_A          162 CESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA-TVFDTPQF  240 (428)
T ss_dssp             CCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGG-GCCSSSCC
T ss_pred             cCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccc-cccCCCCc
Confidence            8642 23578999998886410 001256665542  25999999   667754 6899999999999985 32    11


Q ss_pred             cCCCC---------CCCc--EEEEccccCcCCCCCc--eEEEEEe
Q 021539          268 LALAL---------HRPD--LVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       268 ldl~~---------l~~D--fl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      .++..         .++|  +++.|+|| .|| ..|  +|+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~d~viv~~s~sK-~~g-~~Glr~G~~~~~  283 (428)
T 1iay_A          241 VSIAEILDEQEMTYCNKDLVHIVYSLSK-DMG-LPGFRVGIIYSF  283 (428)
T ss_dssp             CCHHHHHTSGGGTTSCTTSEEEEEESTT-TSS-CGGGCEEEEEES
T ss_pred             cCHHHhccccccccCCCCcEEEEecchh-hcC-CCCceEEEEEeC
Confidence            23221         1268  89999999 887 447  5999984

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.47  E-value=2.1e-12  Score=119.69  Aligned_cols=150  Identities=8%  Similarity=-0.050  Sum_probs=109.3

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      ++.|+.+|+++|+++++  |+||+|+|+|+++++.++     ++|+ ....|+.  +...++..|.++..+|.+. ++.+
T Consensus        64 ~~l~~~la~~~~~~~~~--i~~~~g~t~al~~~~~~~-----d~vi~~~~~~~~--~~~~~~~~g~~~~~~~~~~-~~~~  133 (361)
T 3ftb_A           64 RRLNKSIENYLKLKDIG--IVLGNGASEIIELSISLF-----EKILIIVPSYAE--YEINAKKHGVSVVFSYLDE-NMCI  133 (361)
T ss_dssp             HHHHHHHHHHHTCCSCE--EEEESSHHHHHHHHHTTC-----SEEEEEESCCTH--HHHHHHHTTCEEEEEECCT-TSCC
T ss_pred             HHHHHHHHHHhCCCcce--EEEcCCHHHHHHHHHHHc-----CcEEEecCChHH--HHHHHHHcCCeEEEeecCc-ccCC
Confidence            58999999999997654  999999999999999887     6775 4445542  2233455799999999886 5567


Q ss_pred             CHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHH---HH-HHHCCcEEEecccccCccCc-----ccCC-CCCCC
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED-----QLAL-ALHRP  275 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~-----pldl-~~l~~  275 (311)
                      +.++|++.+++ +     ++|.++.  +.+|.++|.+++   .+ |+++|+++++|.+|+- ...     .+.+ ...+.
T Consensus       134 ~~~~l~~~l~~-~-----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~  206 (361)
T 3ftb_A          134 DYEDIISKIDD-V-----DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIE-FTGDPSSSFVGEIKNYSC  206 (361)
T ss_dssp             CHHHHHHHTTT-C-----SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGG-GTCCTTSSSGGGTTTCSS
T ss_pred             CHHHHHHhccC-C-----CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchh-hcCCcccchhHhcccCCC
Confidence            88999988875 3     4555543  269999987765   33 4689999999999984 322     1121 12244


Q ss_pred             cEEEEccccCcCCCCCc--eEEEE
Q 021539          276 DLVLCTLDNNTHAQPLK--ITCLL  297 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~G--iG~L~  297 (311)
                      ++++.|++| .+| +.|  +|+++
T Consensus       207 ~i~~~s~sK-~~~-~~G~r~g~~~  228 (361)
T 3ftb_A          207 LFIIRAMTK-FFA-MPGIRFGYGI  228 (361)
T ss_dssp             EEEEEESSS-TTS-CGGGCCEEEE
T ss_pred             EEEEeeChh-hcC-CCCcceeEEE
Confidence            578889999 777 445  68777

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.46  E-value=1.5e-13  Score=129.85  Aligned_cols=164  Identities=9%  Similarity=0.052  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|++++      ++++ .+|+||+|+|+|+++++.++ ..+|+.|+. ...|+.  ....++..|.++..+|.+
T Consensus        64 ~~l~~~la~~~~~~~~~~~~~~-~~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~  139 (410)
T 3e2y_A           64 PALVKALSCLYGKIYQRQIDPN-EEILVAVGAYGSLFNSIQGL-VDPGDEVIIMVPFYDC--YEPMVRMAGAVPVFIPLR  139 (410)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTT-TSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC-CCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--hHHHHHHcCCEEEEEecc
Confidence            467888888887      6552 24999999999999999887 568898763 334442  223345569999998875


Q ss_pred             C----------CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchh---cHHHHHH-HHHCCcEEEecccccCc--
Q 021539          202 W----------LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRY---SMHWISE-AHRNAWHVLLDATGLVF--  263 (311)
Q Consensus       202 ~----------~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~---Pi~~I~~-a~~~g~~vlvDAaQsv~--  263 (311)
                      .          .+..++.++|++.++++     +++|.+...  .+|.++   ++++|.+ |+++|+++++|.+|+..  
T Consensus       140 ~~~~~g~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~  214 (410)
T 3e2y_A          140 SKPTDGMKWTSSDWTFDPRELESKFSSK-----TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVY  214 (410)
T ss_dssp             ECCCCSSCCBGGGEECCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             ccccccccccccCCcCCHHHHHhhcCCC-----ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhccc
Confidence            2          23457999999888754     566665432  699996   5666655 68999999999999741  


Q ss_pred             -cCcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          264 -GEDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       264 -G~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                       |+.+.++..+    +.++++.|++| .|| +.|  +|+++.+++..
T Consensus       215 ~~~~~~~~~~~~~~~~~~i~~~S~sK-~~g-~~G~r~G~~~~~~~~~  259 (410)
T 3e2y_A          215 TGHTHVKIATLPGMWERTITIGSAGK-TFS-VTGWKLGWSIGPAHLI  259 (410)
T ss_dssp             TTCCCCCGGGSTTCGGGEEEEEEHHH-HSS-CGGGCCEEEECCHHHH
T ss_pred             CCCCCCCHHHcCCccCeEEEEecchh-hcC-CCCceEEEEEECHHHH
Confidence             3333344333    34589999999 887 446  89988876543

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.46  E-value=4.6e-13  Score=126.53  Aligned_cols=162  Identities=11%  Similarity=-0.014  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH--HHHH-HHhCCcEEEEEeCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY--IKGF-AAQKESKVIAAPETWL  203 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~--~~~l-a~~~G~~V~~vp~~~~  203 (311)
                      .+.+|+.+++++|++.   ..++|+|+|+|+..++.++ ..+||.|+ ....|+...  ...+ ....++++..++.+..
T Consensus        80 ~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~~al~~~-~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  155 (425)
T 3ecd_A           80 EALAIERVKRLFNAGH---ANVQPHSGAQANGAVMLAL-AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRD  155 (425)
T ss_dssp             HHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECC------------------CEEEEECCCTT
T ss_pred             HHHHHHHHHHHhCCCC---ceeecCchHHHHHHHHHHc-cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcc
Confidence            4568899999999863   2467899999999988877 67899986 444555311  1111 1112345556666543


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC--CC-CCCcEEE
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL--AL-HRPDLVL  279 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl--~~-l~~Dfl~  279 (311)
                      ++.++.++|++.+++.    ++++|.+....+|...++++|.+ |+++|+++++|.+|+. |...-+.  .. ..+|+++
T Consensus       156 ~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~-g~~~~~~~~~~~~~~di~~  230 (425)
T 3ecd_A          156 TMLIDYDQVEALAQQH----KPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIA-GVIAAGRHANPVEHAHVVT  230 (425)
T ss_dssp             TSSCCHHHHHHHHHHH----CCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGH-HHHHTTSSCCGGGTCSEEE
T ss_pred             cCccCHHHHHHHHhhc----CCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChH-hhhhcccccCchhcCcEEE
Confidence            5678999999999742    14566665335799999999966 6999999999999976 6542211  11 1379999


Q ss_pred             EccccCcCCCCCceEEEEEeC
Q 021539          280 CTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       280 ~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      +|+|| ++++|. .|+++.++
T Consensus       231 ~s~sK-~l~g~~-~g~~~~~~  249 (425)
T 3ecd_A          231 STTHK-TLRGPR-GGFVLTND  249 (425)
T ss_dssp             EESSG-GGCCCS-CEEEEESC
T ss_pred             ecCCc-ccCCCC-cEEEEeCC
Confidence            99999 555586 48888774

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.46  E-value=2.2e-13  Score=130.64  Aligned_cols=164  Identities=16%  Similarity=0.104  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          129 IQARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       129 e~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .+.|+.+|+++    |   ++++  .|+||+|+|+|+++++.++ ..+|+.|++. ..|+.  +...++..|.++..+|.
T Consensus        88 ~~lr~~la~~l~~~~g~~~~~~~--~v~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~  162 (425)
T 1vp4_A           88 PVLKQQILKLLERMYGITGLDED--NLIFTVGSQQALDLIGKLF-LDDESYCVLDDPAYLG--AINAFRQYLANFVVVPL  162 (425)
T ss_dssp             HHHHHHHHHHHHHHHCCCSCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCHH--HHHHHHTTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHhccCCCCCCcc--cEEEeccHHHHHHHHHHHh-CCCCCEEEEeCCCcHH--HHHHHHHcCCEEEEecc
Confidence            47888999998    9   4444  5999999999999999987 4678988643 34432  23345567999999998


Q ss_pred             CCCCcccCHHHHHhhhhccCC---CCCceEE-EEec--ccccchhcHHH---HHH-HHHCCcEEEecccccCccC----c
Q 021539          201 TWLDLRIKGSQLSQNFRRKCK---YTPKGLF-SYPV--VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGE----D  266 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~---~~~t~LV-s~~~--~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~----~  266 (311)
                      +. ++ ++.++|++.+++...   ..++++| +++.  +.||.++|.++   |.+ |+++|+++++|.+|+. ..    .
T Consensus       163 ~~-~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~  239 (425)
T 1vp4_A          163 ED-DG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGA-LRYEGET  239 (425)
T ss_dssp             ET-TE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTT-CBCSSCC
T ss_pred             CC-CC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCcc-ccCCCCC
Confidence            75 44 899999998875100   0014665 4443  25899998654   544 6899999999999986 32    1


Q ss_pred             ccCCC---CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          267 QLALA---LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       267 pldl~---~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ..++.   ..+.++++.|++| +|| | |  +|++++++++.
T Consensus       240 ~~~~~~~~~~~~~i~~~s~sK-~~~-~-G~r~G~~~~~~~~~  278 (425)
T 1vp4_A          240 VDPIFKIGGPERVVLLNTFSK-VLA-P-GLRIGMVAGSKEFI  278 (425)
T ss_dssp             CCCHHHHHCTTTEEEEEESTT-TTC-G-GGCEEEEECCHHHH
T ss_pred             CcCHHHhCCCCCEEEEecccc-ccc-c-ccceEEEeeCHHHH
Confidence            23332   2356799999999 888 6 7  69999876543

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.45  E-value=2.5e-13  Score=127.01  Aligned_cols=161  Identities=11%  Similarity=0.043  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHc-CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCC-Cc
Q 021539          129 IQARNRALKHC-GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWL-DL  205 (311)
Q Consensus       129 e~aR~~IA~~L-ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~-~g  205 (311)
                      .+.|+.+|+++ ++++++  |+||+|+|+|+++++.++ .++||.|+. ...|+.  ....++..|.++..+|.+.. +.
T Consensus        66 ~~l~~~la~~~~~~~~~~--v~~~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~  140 (375)
T 3op7_A           66 PAFKKSVSQLYTGVKPEQ--ILQTNGATGANLLVLYSL-IEPGDHVISLYPTYQQ--LYDIPKSLGAEVDLWQIEEENGW  140 (375)
T ss_dssp             HHHHHHHHTTSSSCCGGG--EEEESHHHHHHHHHHHHH-CCTTCEEEEEESSCTH--HHHHHHHTTCEEEEEEEEGGGTT
T ss_pred             HHHHHHHHHHhccCChhh--EEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEEeccccCCC
Confidence            37899999998 466554  999999999999999887 578999864 444542  22334567999999987642 33


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccCcc-c-C-CCCCCCc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGEDQ-L-A-LALHRPD  276 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~~p-l-d-l~~l~~D  276 (311)
                      .+|.++|+++++++     +++|.+...  .+|.++|   +++|.+ |+++|+++++|.+|+. .... + . .+..+.+
T Consensus       141 ~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~  214 (375)
T 3op7_A          141 LPDLEKLRQLIRPT-----TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRS-FSELDVPSIIEVYDKG  214 (375)
T ss_dssp             EECHHHHHHHCCTT-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCC-CSSSCCCCHHHHCTTE
T ss_pred             CCCHHHHHHhhccC-----CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-ccccCCCchhhhcCCE
Confidence            57999999999764     456655432  6999999   777755 6899999999999886 3322 1 1 1224567


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +++.|++| .+| ..|  +|+++.++++
T Consensus       215 i~~~s~sK-~~~-~~G~r~G~v~~~~~l  240 (375)
T 3op7_A          215 IAVNSLSK-TYS-LPGIRIGWVAANHQV  240 (375)
T ss_dssp             EEEEESSS-SSS-CGGGCCEEEECCHHH
T ss_pred             EEEeEChh-hcC-CcccceEEEEeCHHH
Confidence            88999999 777 336  5999886544

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.44  E-value=1e-12  Score=125.87  Aligned_cols=166  Identities=11%  Similarity=0.059  Sum_probs=116.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      ....++.++.+++.+|.+.+...|+||+|+|||+++++.++ ..+|+.|++ ...|+.  ....++..|.++..+|.++.
T Consensus        99 ~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~-~~~gd~Vi~~~~~y~~--~~~~~~~~g~~~~~~~~~~~  175 (421)
T 3l8a_A           99 DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAF-SEKGDAVLINSPVYYP--FARTIRLNDHRLVENSLQII  175 (421)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHH-SCTEEEEEEEESCCHH--HHHHHHHTTEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCCcHH--HHHHHHHCCCEEEecccccc
Confidence            45557788888888884323335999999999999999987 467888863 344442  22334556999999998622


Q ss_pred             Cc--ccCHHHHHhhhhccCCCCCceEEEEecc--cccch---hcHHHHHH-HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          204 DL--RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTR---YSMHWISE-AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       204 ~g--~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i---~Pi~~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      ++  .+|.++|++.+++.    ++++|.+...  .+|.+   .++++|.+ |+++|+++++|.+|+..   |+....+..
T Consensus       176 ~~~~~~d~~~le~~i~~~----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~  251 (421)
T 3l8a_A          176 NGRFEIDFEQLEKDIIDN----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNT  251 (421)
T ss_dssp             TTEEECCHHHHHHHHHHT----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred             CCCeeeCHHHHHHHhhcc----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHH
Confidence            33  57999999999732    1566665433  69998   45666655 68999999999999852   222233333


Q ss_pred             C-----CCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          273 H-----RPDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       273 l-----~~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                      +     +.++++.|++| .+| +.|  +|+++++
T Consensus       252 ~~~~~~~~~i~~~s~sK-~~g-~~G~~~G~~~~~  283 (421)
T 3l8a_A          252 LDASYKDFTIILSSATK-TFN-IAGTKNSFAIIQ  283 (421)
T ss_dssp             SCTTGGGTEEEEECSHH-HHT-CGGGCCEEEECC
T ss_pred             cCchhcCcEEEEEeChh-hcc-CchhheEeEEcC
Confidence            3     44599999999 776 335  5999887

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.44  E-value=2.3e-13  Score=126.00  Aligned_cols=154  Identities=18%  Similarity=0.166  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHcC---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          128 EIQARNRALKHCG---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       128 le~aR~~IA~~Lg---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      .++.|+.+|++++   +++++  |+||+|+|+++++++.++    |+.|+....++ .. ...++..|.++..+|.+. +
T Consensus        58 ~~~lr~~la~~~~~~~~~~~~--v~~~~G~~~al~~~~~~~----gd~Vl~~p~y~-~~-~~~~~~~g~~~~~v~~~~-~  128 (335)
T 1uu1_A           58 DEELIEKILSYLDTDFLSKNN--VSVGNGADEIIYVMMLMF----DRSVFFPPTYS-CY-RIFAKAVGAKFLEVPLTK-D  128 (335)
T ss_dssp             CHHHHHHHHHHHTCSSCCGGG--EEEESSHHHHHHHHHHHS----SEEEECSSSCH-HH-HHHHHHHTCEEEECCCCT-T
T ss_pred             hHHHHHHHHHHcCCCCCCHHH--EEEcCChHHHHHHHHHHh----CCcEEECCCcH-HH-HHHHHHcCCeEEEeccCC-C
Confidence            4589999999999   77654  999999999999999987    78887543333 22 233445699999998864 4


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccCcc-cC-CCCCCCcEEE
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-LA-LALHRPDLVL  279 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-ld-l~~l~~Dfl~  279 (311)
                      +.++.++|     ++     +++|.++  ++.||.++|.+++.+ ++..| ++++|.+|+..+..+ ++ +...+.++++
T Consensus       129 ~~~d~~~l-----~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~  197 (335)
T 1uu1_A          129 LRIPEVNV-----GE-----GDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVI  197 (335)
T ss_dssp             SCCCCCCC-----CT-----TEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEE
T ss_pred             CCCCHHHc-----CC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEE
Confidence            45666544     22     4666643  236999999999976 46568 899999998312212 33 2445678999


Q ss_pred             EccccCcCCCCCc--eEEEEEeCCCC
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      .|++| +|| +.|  +|++++++++.
T Consensus       198 ~s~sK-~~g-~~G~r~G~~~~~~~~~  221 (335)
T 1uu1_A          198 RTFSK-AFS-LAAQRVGYVVASEKFI  221 (335)
T ss_dssp             EESTT-TTT-CGGGCCEEEEECHHHH
T ss_pred             ecchh-hcC-CcccCeEEEEeCHHHH
Confidence            99999 888 557  79999976543

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.43  E-value=2.8e-13  Score=129.61  Aligned_cols=165  Identities=12%  Similarity=0.053  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHc-----CCCCCCCe---EEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHh-CCcEEEEE
Q 021539          129 IQARNRALKHC-----GLSEDEYL---VLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQ-KESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~L-----ga~~dey~---VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~-~G~~V~~v  198 (311)
                      .+.|+.||+++     +++++  +   |+||+|+|+|+++++.++ ..+||.|+.. ..|+.  ....++. .|.++..+
T Consensus        91 ~~lr~~ia~~~~~~~~~~~~~--~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~--~~~~~~~~~g~~~~~~  165 (430)
T 2x5f_A           91 EELRDLWQQKMLRDNPELSID--NMSRPIVTNALTHGLSLVGDLF-VNQDDTILLPEHNWGN--YKLVFNTRNGANLQTY  165 (430)
T ss_dssp             HHHHHHHHHHHHHHCTTCCGG--GBCCCEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCTH--HHHHHTTTTCCEEEEE
T ss_pred             HHHHHHHHHHHhccCcccCCC--ccceEEEcCCchHHHHHHHHHH-hCCCCEEEEcCCcCcc--HHHHHHHhcCCeEEEE
Confidence            47899999999     88653  5   999999999999999987 4688988643 44442  2334555 79999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHH-----CCcEEEecccccCc---c
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHR-----NAWHVLLDATGLVF---G  264 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~-----~g~~vlvDAaQsv~---G  264 (311)
                      |.+..+..++.++|++.+++..  ..++++.+..  +.||.++|   +++|.+ |++     +|+++++|.+++..   |
T Consensus       166 ~~~~~~~~~d~~~l~~~l~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~  243 (430)
T 2x5f_A          166 PIFDKDGHYTTDSLVEALQSYN--KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED  243 (430)
T ss_dssp             CCBCTTSCBCSHHHHHHHHHCC--SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS
T ss_pred             eccCccCCcCHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc
Confidence            9865334689999999997621  1256665542  26999999   566654 688     99999999999851   1


Q ss_pred             C--ccc--CCCC-CCC---cEEEEccccCcCCCCCc--eEEEEE---eCCC
Q 021539          265 E--DQL--ALAL-HRP---DLVLCTLDNNTHAQPLK--ITCLLV---RRKS  302 (311)
Q Consensus       265 ~--~pl--dl~~-l~~---Dfl~~S~HK~l~G~P~G--iG~L~v---r~~~  302 (311)
                      .  .++  ++.. .+.   ++++.|++| .|| +.|  +|++++   ++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~~G~riG~~~~~~~~~~~  292 (430)
T 2x5f_A          244 VYTQSLFTALTNLHSNAILPIRLDGATK-EFF-AWGFRVGFMTFGTSDQTT  292 (430)
T ss_dssp             SCCSCHHHHHHTTCCTTEEEEEEEEHHH-HTT-CGGGCCEEEEEBCCCHHH
T ss_pred             ccchHHHHHHhhccCCcceEEEEEeccc-CCC-CCCCCeEEEEEecCCHHH
Confidence            1  122  3322 334   688999999 887 447  799999   6544

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.43  E-value=5.8e-13  Score=126.72  Aligned_cols=154  Identities=14%  Similarity=0.074  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcC--hHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEE--SDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~--~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ++.++.+++++|+++. .+++||+|+|+|+++++.++   +||+|+ ...+++  ...+. .++..|+++..+ .     
T Consensus        61 ~~~~~~~a~~~g~~~~-~~~~~~~ggt~a~~~~~~~~---~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v-~-----  129 (374)
T 2aeu_A           61 EKVNEYGLKHLGGDEN-DKCVGFNRTSSAILATILAL---KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES-D-----  129 (374)
T ss_dssp             HHHHHHHHHHHTCCTT-EEEEEESSHHHHHHHHHHHH---CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE-S-----
T ss_pred             HHHHHHHHHHhCCCCc-ceEEEEcChHHHHHHHHHhC---CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe-C-----
Confidence            4667777899998521 25999999999999999887   789886 444333  22222 455679988877 1     


Q ss_pred             ccCHHHHHhhhhccCCCCCceE-EEEecc--ccc-chhcHHHHHH-HHHCCcEEEecccccCccCc-cc-C--CCCCCCc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGL-FSYPVV--VNG-TRYSMHWISE-AHRNAWHVLLDATGLVFGED-QL-A--LALHRPD  276 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~L-Vs~~~~--~tG-~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-pl-d--l~~l~~D  276 (311)
                        |.++|++. +++     +++ |.+...  .+| .+.|+++|.+ |+++|+++++|.+++. +.. +. .  ...+++|
T Consensus       130 --d~~~l~~~-~~~-----~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~d  200 (374)
T 2aeu_A          130 --KVGEILNK-IDK-----DTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGA-RVRLLFNQPPALKLGAD  200 (374)
T ss_dssp             --CHHHHHTT-CCT-----TEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHH-HHHHHTTCCCHHHHTCS
T ss_pred             --CHHHHHhc-CCC-----ccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCccc-ccccccccCCccccCCc
Confidence              56788776 433     567 666433  588 8999999966 6999999999999987 631 11 1  1124789


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++++|+|| ++++| ++|+++.++++.+
T Consensus       201 i~~~S~sK-~l~g~-~~G~~~~~~~~~~  226 (374)
T 2aeu_A          201 LVVTSTDK-LMEGP-RGGLLAGKKELVD  226 (374)
T ss_dssp             EEEEETTS-SSSSC-SCEEEEEEHHHHH
T ss_pred             EEEecCcc-cccCc-ceEEEEECHHHHH
Confidence            99999999 56546 8999998876543

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.43  E-value=5e-13  Score=124.78  Aligned_cols=160  Identities=12%  Similarity=0.038  Sum_probs=110.6

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCC--CCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFK--GNYYLT-IISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~--Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.+|+++    |++.+...|+||+|+|+|+++++.++ ..+  |+.|+. ...|+.  +...++..|.++..+|.+.
T Consensus        63 ~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~-~~~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~  139 (376)
T 3ezs_A           63 SLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFV-LFDYQNPTIAYPNPFYQI--YEGAAKFIKAKSLLMPLTK  139 (376)
T ss_dssp             HHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHH-TTTCSSCEEEEEESCCTH--HHHHHHHTTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHH-cCCCCCCEEEEecCCcHh--HHHHHHHcCCEEEEcccCC
Confidence            6777777776    87322335999999999999999887 367  888863 444542  2334556799999999875


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCc---ccCCC--
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED---QLALA--  271 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~---pldl~--  271 (311)
                       +..++. +|++.+.++     +++|.++  ++.+|.++|.+++   .+ |+++|+++++|.+|+. ...   +.++.  
T Consensus       140 -~~~~~~-~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~  211 (376)
T 3ezs_A          140 -ENDFTP-SLNEKELQE-----VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSE-IYENTPPPSLLEA  211 (376)
T ss_dssp             -GGTSCC-CCCHHHHHH-----CSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBSSSCCCCHHHH
T ss_pred             -CCCcch-hHHhhhccC-----CCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchh-hccCCCCCCHHHc
Confidence             323444 566666654     3455553  2369999997655   33 5889999999999986 322   23321  


Q ss_pred             -------CCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          272 -------LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       272 -------~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                             ..+.++++.|++| .+| +.|  +|+++.++++
T Consensus       212 ~~~~~~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~  249 (376)
T 3ezs_A          212 CMLAGNEAFKNVLVIHSLSK-RSS-APGLRSGFIAGDSRL  249 (376)
T ss_dssp             HHHTTCTTCTTEEEEEESTT-TTT-CGGGCCEEEEECHHH
T ss_pred             cccccccccCcEEEEecchh-ccC-CccceeEEEeeCHHH
Confidence                   3577899999999 776 335  7888877654

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.43  E-value=1.4e-13  Score=132.15  Aligned_cols=165  Identities=10%  Similarity=0.029  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC--------------EEEE--ccCcCh--HH
Q 021539          128 EIQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN--------------YYLT--IISEES--DY  183 (311)
Q Consensus       128 le~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd--------------~Ils--~~eh~~--~~  183 (311)
                      .++.|+.||+++      ++++++  |+||+|+|+|+++++.++ ..+|+              .|+.  ..+++.  ..
T Consensus        85 ~~~lr~~ia~~l~~~~g~~~~~~~--i~~t~G~t~al~~~~~~l-~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~  161 (444)
T 3if2_A           85 DSAFIDALVGFFNRHYDWNLTSEN--IALTNGSQNAFFYLFNLF-GGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDV  161 (444)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCGGG--EEEESSHHHHHHHHHHHS-SEEEECC-------CEEEEEEEESSSSCCGGGTTC
T ss_pred             CHHHHHHHHHHHHhhcCCCCCHHH--EEEecCcHHHHHHHHHHH-hCCCccccccccccccccceEEEeCCCCccchhhc
Confidence            357999999998      666654  999999999999999987 45666              6653  233331  11


Q ss_pred             HH--HHHHhCCcEEEEEeCCCCCc----ccCHHHHHhhh---hccCCCCCceEEEEec--ccccchhc---HHHHHH-HH
Q 021539          184 IK--GFAAQKESKVIAAPETWLDL----RIKGSQLSQNF---RRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AH  248 (311)
Q Consensus       184 ~~--~la~~~G~~V~~vp~~~~~g----~id~~~L~~~l---~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~  248 (311)
                      +.  ......|..+..+|++..+|    .+|.++|++++   +++     +++|.++.  +.+|.++|   +++|.+ |+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~a~  236 (444)
T 3if2_A          162 HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGR-----IGAICCSRPTNPTGNVLTDEEMAHLAEIAK  236 (444)
T ss_dssp             CSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             ccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCC-----ceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence            10  01233478888888764223    58999999884   433     56776642  36999999   555644 68


Q ss_pred             HCCcEEEecccccCccCc-----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          249 RNAWHVLLDATGLVFGED-----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       249 ~~g~~vlvDAaQsv~G~~-----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|+++++|.+|+. +..     .+.....+.+++++|++| +.+...++|+++.++++
T Consensus       237 ~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~S~sK-~~~~G~r~G~~~~~~~l  293 (444)
T 3if2_A          237 RYDIPLIIDNAYGM-PFPNIIYSDAHLNWDNNTILCFSLSK-IGLPGMRTGIIVADAKV  293 (444)
T ss_dssp             HTTCCEEEECTTCT-TTTCCBCSCCCCCCCTTEEEEEESTT-TTCGGGCCEEEECCHHH
T ss_pred             HCCCEEEEECCCCC-cccccccccccccCCCCEEEEechhh-ccCCCCceEEEEECHHH
Confidence            99999999999984 322     222223467899999999 63312347877766543

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.42  E-value=2.3e-12  Score=121.09  Aligned_cols=162  Identities=9%  Similarity=-0.024  Sum_probs=111.9

Q ss_pred             HHHHHHHHHc----CC---CCCCCeEEEeCCHHHHHHHHHhcCCCCCC-----CEEEE-ccCcChHHHHHHHHhCCcEEE
Q 021539          130 QARNRALKHC----GL---SEDEYLVLFVPNYKEAMLMIGESYPFFKG-----NYYLT-IISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       130 ~aR~~IA~~L----ga---~~dey~VvFTsnaTealnlv~~s~~~~~G-----d~Ils-~~eh~~~~~~~la~~~G~~V~  196 (311)
                      +.|+.+|+++    |.   +++ .+|+||+|+|+|+++++.++ ..+|     +.|++ ...|+ . ....++..|.++.
T Consensus        70 ~lr~~la~~l~~~~g~~~~~~~-~~i~~t~g~~~al~~~~~~~-~~~g~~~~~d~vl~~~p~~~-~-~~~~~~~~g~~~~  145 (396)
T 3jtx_A           70 ELRQACANWLKRRYDGLTVDAD-NEILPVLGSREALFSFVQTV-LNPVSDGIKPAIVSPNPFYQ-I-YEGATLLGGGEIH  145 (396)
T ss_dssp             HHHHHHHHHHHHHTTTCCCCTT-TSEEEESSHHHHHHHHHHHH-CCC---CCCCEEEEEESCCH-H-HHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCCC-CeEEEcCCcHHHHHHHHHHH-hCCCCccCCCEEEEcCCCcH-h-HHHHHHHcCCEEE
Confidence            5666666655    64   354 14999999999999999887 3565     67763 33443 2 2234556799999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccC---cc
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGE---DQ  267 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~---~p  267 (311)
                      .+|.+..+..+|.++|++.++++     +++|.+.  ++.||.++|.++   |.+ |+++|+++++|.+|+....   .+
T Consensus       146 ~v~~~~~g~~~d~~~l~~~~~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  220 (396)
T 3jtx_A          146 FANCPAPSFNPDWRSISEEVWKR-----TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKP  220 (396)
T ss_dssp             EEECCTTTCCCCGGGSCHHHHHT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCC
T ss_pred             EeecCCCCCccCHHHHHHhhccC-----cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence            99985434467888998888764     4666654  226999999887   444 5889999999999985111   23


Q ss_pred             cCCC--------CCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          268 LALA--------LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       268 ldl~--------~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +.+.        ..+.++++.|++| .|| ..|  +|+++.++++
T Consensus       221 ~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~~G~r~G~~~~~~~~  263 (396)
T 3jtx_A          221 LGCLQAAAQLGRSRQKLLMFTSLSK-RSN-VPGLRSGFVAGDAEL  263 (396)
T ss_dssp             CCHHHHHHHTTCCCTTEEEEEESTT-TSS-CGGGCCEEEEECHHH
T ss_pred             chHHhhhhhcccccCcEEEEecccc-ccC-CcccceEEEEeCHHH
Confidence            3221        2567899999999 776 335  7888776544

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.42  E-value=9e-13  Score=127.73  Aligned_cols=163  Identities=12%  Similarity=-0.006  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .+.|+.+|+++    |.+.+..+|+||+|+|+|+++++.++ ..+||.|+ ....|+.  ....++..|.++..+|.+..
T Consensus        98 ~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~  174 (447)
T 3b46_A           98 PSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGL-LNAGDEVIVFEPFFDQ--YIPNIELCGGKVVYVPINPP  174 (447)
T ss_dssp             HHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEEeCCCc
Confidence            36788888876    43222225999999999999999887 46889886 3344442  22334556999999887542


Q ss_pred             -----------CcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCccC-
Q 021539          204 -----------DLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGE-  265 (311)
Q Consensus       204 -----------~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~-  265 (311)
                                 +..++.++|++.++++     +++|.+..  +.||.++|   +++|.+ |+++|+++++|.+++. .. 
T Consensus       175 ~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~-~~~  248 (447)
T 3b46_A          175 KELDQRNTRGEEWTIDFEQFEKAITSK-----TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEH-LYF  248 (447)
T ss_dssp             GGGGTSCBCSTTSEECHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBC
T ss_pred             cccccccccccCcccCHHHHHHhhccC-----CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchh-ccc
Confidence                       2468999999988753     46665543  25999976   556654 6899999999999985 22 


Q ss_pred             --cccCCCC-----CCCcEEEEccccCcCCCCCc--eEEEEE-eCCC
Q 021539          266 --DQLALAL-----HRPDLVLCTLDNNTHAQPLK--ITCLLV-RRKS  302 (311)
Q Consensus       266 --~pldl~~-----l~~Dfl~~S~HK~l~G~P~G--iG~L~v-r~~~  302 (311)
                        ....+..     .+.|+++.|++| .|| +.|  +|+++. ++++
T Consensus       249 ~g~~~~~~~~~~~~~~~~i~i~S~sK-~~~-~~G~riG~~~~~~~~l  293 (447)
T 3b46_A          249 TDSFTRIATLSPEIGQLTLTVGSAGK-SFA-ATGWRIGWVLSLNAEL  293 (447)
T ss_dssp             SSCCCCGGGSCHHHHTTEEEEEEHHH-HTT-CTTSCCEEEECSCHHH
T ss_pred             CCCCcCHHHcCCCCCCcEEEEecCch-hcC-CcchhhEEEEeCCHHH
Confidence              1123322     368999999999 888 558  999998 6544

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.41  E-value=3.1e-12  Score=122.80  Aligned_cols=166  Identities=9%  Similarity=-0.042  Sum_probs=113.9

Q ss_pred             HHHHHHHHH----cCCCCC-------CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEE
Q 021539          130 QARNRALKH----CGLSED-------EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       130 ~aR~~IA~~----Lga~~d-------ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~  197 (311)
                      +.|+.|+++    .|.+.+       ..+|+||+|+|+|+++++.++ ..+||.|+.. ..|+ . ....++..|.++..
T Consensus        82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~  158 (425)
T 2r2n_A           82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI-INPGDNVLLDEPAYS-G-TLQSLHPLGCNIIN  158 (425)
T ss_dssp             HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCH-H-HHHHHGGGTCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh-CCCCCEEEEeCCCcH-H-HHHHHHHcCCEEEE
Confidence            345555554    587642       136999999999999999987 4688988643 3333 2 23345567999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccC-------CCCCceEEEE-e--cccccchhcHH---HHHH-HHHCCcEEEecccccC-
Q 021539          198 APETWLDLRIKGSQLSQNFRRKC-------KYTPKGLFSY-P--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLV-  262 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~-------~~~~t~LVs~-~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv-  262 (311)
                      +|.+. ++ ++.++|++.++...       ....+++|.+ +  ++-||.++|.+   +|.+ |+++|+++++|.+++- 
T Consensus       159 v~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~  236 (425)
T 2r2n_A          159 VASDE-SG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFL  236 (425)
T ss_dssp             ECEET-TE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred             eCcCC-CC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccc
Confidence            99864 44 89999999887210       0012456544 4  23699999987   5544 6899999999999972 


Q ss_pred             --ccCcccCCCCC---CCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          263 --FGEDQLALALH---RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       263 --~G~~pldl~~l---~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                        .|....++..+   +.++++.|++| .|| | |  +|+++.++++.
T Consensus       237 ~~~g~~~~~~~~~~~~~~~i~~~s~SK-~~~-~-GlRiG~~~~~~~l~  281 (425)
T 2r2n_A          237 QFNKFRVPTFLSMDVDGRVIRADSFSK-IIS-S-GLRIGFLTGPKPLI  281 (425)
T ss_dssp             BSSSSCCCCTGGGCTTSCEEEEEESTT-TTC-S-TTCCEEEEEEHHHH
T ss_pred             cCCCCCCCCccccCCCCCEEEEccchh-hcc-C-ccceEEEecCHHHH
Confidence              14433444333   45699999999 788 6 7  79999987543

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.40  E-value=2.5e-12  Score=125.28  Aligned_cols=162  Identities=15%  Similarity=0.134  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      .+.|+.||+++    |++ +..+|+||+|+|+|+++++..+ ..+||.|+.. ..|+ . ....++..|+++..+|.+. 
T Consensus       121 ~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l-~~~Gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~v~~~~-  195 (448)
T 3aow_A          121 TPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVF-LNPGDIVVVEAPTYL-A-ALQAFNFYEPQYIQIPLDD-  195 (448)
T ss_dssp             HHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCH-H-HHHHHHTTCCEEEEEEEET-
T ss_pred             HHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHH-cCCCCEEEEeCCChH-H-HHHHHHHcCCEEEEeccCC-
Confidence            47888999988    984 3346999999999999999987 4689988643 3333 2 2233456799999999875 


Q ss_pred             CcccCHHHHHhhhh----ccCCCCCceEE-EEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCccCc----cc
Q 021539          204 DLRIKGSQLSQNFR----RKCKYTPKGLF-SYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGED----QL  268 (311)
Q Consensus       204 ~g~id~~~L~~~l~----~~~~~~~t~LV-s~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~----pl  268 (311)
                      ++ ++.++|++.++    +.   .++++| .++.  +-||.++|.+   +|.+ |+++|+++++|.+++. +..    ..
T Consensus       196 ~g-~d~~~L~~~l~~~~~~~---~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~-~~~~g~~~~  270 (448)
T 3aow_A          196 EG-MKVEILEEKLKELKSQG---KKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGE-LRYSGNPEK  270 (448)
T ss_dssp             TE-ECHHHHHHHHHHHHHTT---CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTT-CBCSSCCCC
T ss_pred             CC-CCHHHHHHHHhhhhccC---CCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-ccCCCCCCc
Confidence            45 89999999887    41   125665 4443  2599999976   4544 6889999999999986 432    22


Q ss_pred             CCC---CCCCcEEEEccccCcCCCCCc--eEEEEEeCCCC
Q 021539          269 ALA---LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSF  303 (311)
Q Consensus       269 dl~---~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~  303 (311)
                      ++.   ..+.++++.|+.| +|| | |  +|++++++++.
T Consensus       271 ~~~~~~~~~~vi~~~S~SK-~~~-~-GlriG~v~~~~~l~  307 (448)
T 3aow_A          271 KIKALDNEGRVIYLGTFSK-ILA-P-GFRIGWMVGDPGII  307 (448)
T ss_dssp             CTGGGCTTSCEEEEEESTT-TTC-G-GGCCEEEEECHHHH
T ss_pred             CHHhcCCCCCEEEEccchh-hcc-c-cccEEEEEeCHHHH
Confidence            332   2346789999999 888 6 7  89999986553

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.40  E-value=8.4e-13  Score=128.31  Aligned_cols=170  Identities=12%  Similarity=-0.041  Sum_probs=114.4

Q ss_pred             hhhhhHHHH-HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh---HHHH-HHHHhCCcE
Q 021539          121 GNFISIPEI-QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES---DYIK-GFAAQKESK  194 (311)
Q Consensus       121 G~~~~~~le-~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~---~~~~-~la~~~G~~  194 (311)
                      |......++ .+|+++++++|++.   ..+++.|+|+|+..++.++ .++||.|+ ...+|+.   .... .+.. .+..
T Consensus        85 g~~~~~~~e~~a~~~la~~~g~~~---~~v~~~sGs~a~~~a~~~~-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g-~~~~  159 (447)
T 3h7f_A           85 GCEHVDVVENLARDRAKALFGAEF---ANVQPHSGAQANAAVLHAL-MSPGERLLGLDLANGGHLTHGMRLNFSG-KLYE  159 (447)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCGGGTCTTSHHH-HSSE
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCc---eEEEeCCHHHHHHHHHHHh-cCCCCEEEecCcccccccchhhhhhhcC-CeeE
Confidence            444443444 45699999999963   2444778899999888877 57899986 3444432   1110 1111 2566


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc----cC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ----LA  269 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p----ld  269 (311)
                      +..++++..++.+|.++|++.++...    ++++.+....++...|+++|.+ |+++|+++++|.+|+. |...    .+
T Consensus       160 ~~~~~~~~~~~~~d~~~l~~~i~~~~----~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~-g~~~~g~~~~  234 (447)
T 3h7f_A          160 NGFYGVDPATHLIDMDAVRATALEFR----PKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFA-GLVAAGLHPS  234 (447)
T ss_dssp             EEEECCCTTTCSCCHHHHHHHHHHHC----CSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHTTSSCC
T ss_pred             EEEcCcCcccCCcCHHHHHHHHHhcC----CeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchh-hhhcCCCCCC
Confidence            66777765467899999999986421    3566553333444559999976 6999999999999977 6321    12


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      .- ..+|++++|+|| .+|+|.| |+++.++++.
T Consensus       235 ~~-~~~di~~~s~sK-~l~G~~g-G~i~~~~~~~  265 (447)
T 3h7f_A          235 PV-PHADVVSTTVHK-TLGGGRS-GLIVGKQQYA  265 (447)
T ss_dssp             ST-TTCSEEEEESSG-GGCCCSC-EEEEECGGGH
T ss_pred             CC-CCCcEEEecCCc-CCCCCCe-EEEEECHHHH
Confidence            11 257999999999 5555987 9998887543

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.40  E-value=1.2e-12  Score=126.32  Aligned_cols=163  Identities=11%  Similarity=0.045  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC----CCCE---EEEccCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF----KGNY---YLTIISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~----~Gd~---Ils~~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.+++++|.  +  .|+||+|+|+|+++++.++ ..    +||.   |+....|+.... ......|.++..++.
T Consensus        78 ~~~l~~~la~~~~~--~--~v~~t~ggt~A~~~al~~~-~~~~~~~Gd~~~~viv~~~~~~~~~-~~~~~~g~~~~~~~~  151 (467)
T 1ax4_A           78 YYDLKDKAKELFNY--D--YIIPAHQGRGAENILFPVL-LKYKQKEGKAKNPVFISNFHFDTTA-AHVELNGCKAINIVT  151 (467)
T ss_dssp             HHHHHHHHHHHHCC--C--EEEEESSHHHHHHHHHHHH-HHHHHHTTCCSSCEEEESSCCHHHH-HHHHHTTCEEEECBC
T ss_pred             HHHHHHHHHHHcCC--C--cEEEcCCcHHHHHHHHHHH-HHhhccCCCccceEEEeccccchhh-HHHhccCCceecccc
Confidence            45789999999997  2  4999999999999988876 34    7887   765555543322 223445888776543


Q ss_pred             CC---------CCcccCHHHHHhhhhccCCCCCceEEEEecc--cc-cchhcH---HHHHH-HHHCCcEEEecccccCc-
Q 021539          201 TW---------LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VN-GTRYSM---HWISE-AHRNAWHVLLDATGLVF-  263 (311)
Q Consensus       201 ~~---------~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~t-G~i~Pi---~~I~~-a~~~g~~vlvDAaQsv~-  263 (311)
                      ..         .++.+|.++|++++++.. ..++++|.+...  .+ |.++|.   ++|.+ |+++|+++++|++|+.. 
T Consensus       152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~  230 (467)
T 1ax4_A          152 EKAFDSETYDDWKGDFDIKKLKENIAQHG-ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCEN  230 (467)
T ss_dssp             GGGGCTTSCCTTTTCBCHHHHHHHHHHHC-GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHH
T ss_pred             cccccccccCCcccccCHHHHHHHHHhcC-CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhc
Confidence            21         135689999999997521 002567776533  57 787665   45655 68999999999987640 


Q ss_pred             ---------cCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          264 ---------GEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       264 ---------G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                               ++..+++..      ..+|++++|+|| .+|.|.| |+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK-~~g~~~G-g~~~~~  279 (467)
T 1ax4_A          231 AYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKK-DPLLNIG-GLVAIR  279 (467)
T ss_dssp             HHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTS-TTCCSSC-EEEEES
T ss_pred             chhccccccccCCCchhhhhhhhccccceEEEeccc-cCCCCcc-eEEEeC
Confidence                     233444322      247999999999 7885545 555555

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.39  E-value=1.1e-12  Score=126.01  Aligned_cols=166  Identities=7%  Similarity=-0.003  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe
Q 021539          129 IQARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       129 e~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      ++.|+.+|++++        ++++  .|+||+|+|+|+++++.++ .++|+.|+ ....|+. ....+....|.++..+|
T Consensus        89 ~~l~~~la~~~~~~~~~~~~~~~~--~v~~~~gg~~a~~~~~~~l-~~~gd~vl~~~p~~~~-~~~~~~~~~g~~~~~~~  164 (435)
T 3piu_A           89 PAFKKAMVDFMAEIRGNKVTFDPN--HLVLTAGATSANETFIFCL-ADPGEAVLIPTPYYPG-FDRDLKWRTGVEIVPIH  164 (435)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-HHHHTTTTTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCHH--HEEEcCChHHHHHHHHHHh-cCCCCeEEECCCcccc-HHHHHHHhcCCEEEEee
Confidence            478999999998        5555  4999999999999999887 46889886 3445542 12222214699999999


Q ss_pred             CCCC-CcccCHHHHHhhhhccC-CCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccC---ccCccc
Q 021539          200 ETWL-DLRIKGSQLSQNFRRKC-KYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLV---FGEDQL  268 (311)
Q Consensus       200 ~~~~-~g~id~~~L~~~l~~~~-~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv---~G~~pl  268 (311)
                      .+.. +..+|.++|++.+++.. ...++++|.+.  ++.+|.++|.+++   .+ |+++|+++++|.+|+.   .|....
T Consensus       165 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~  244 (435)
T 3piu_A          165 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI  244 (435)
T ss_dssp             CCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCC
T ss_pred             CCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCc
Confidence            8742 12478999999987510 00125665554  3369999988554   33 6889999999999985   122222


Q ss_pred             CCCCC-------------CCcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          269 ALALH-------------RPDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       269 dl~~l-------------~~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      ++..+             +.++++.|++| .|| ..|  +|+++.++
T Consensus       245 ~~~~~~~~~~~d~~~~~~~~~i~i~s~sK-~~g-~~G~r~G~~~~~~  289 (435)
T 3piu_A          245 SVMEVLKDRNCDENSEVWQRVHVVYSLSK-DLG-LPGFRVGAIYSND  289 (435)
T ss_dssp             CHHHHHHC-------CGGGGEEEEEESSS-SSC-CGGGCEEEEEESC
T ss_pred             CHHHhccccccccccCCCCCEEEEEeeec-ccC-CCceeEEEEEeCC
Confidence            22111             12288999999 777 335  79998854

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.39  E-value=2.4e-12  Score=119.49  Aligned_cols=151  Identities=12%  Similarity=0.066  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeC-CCCCcc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPE-TWLDLR  206 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~-~~~~g~  206 (311)
                      ++.|+.+|+++|+++++  |+||+|+|+|+++++.++.   ||.|+. ...|+ . ....++..|+++..+|. +. +..
T Consensus        53 ~~lr~~la~~~~~~~~~--i~~t~g~~~al~~~~~~l~---gd~Vi~~~p~~~-~-~~~~~~~~g~~~~~v~~~~~-~~~  124 (350)
T 3fkd_A           53 GTLRQMLAKRNSVDNNA--ILVTNGPTAAFYQIAQAFR---GSRSLIAIPSFA-E-YEDACRMYEHEVCFYPSNED-IGE  124 (350)
T ss_dssp             HHHHHHHHHHTTCCGGG--EEEESHHHHHHHHHHHHTT---TCEEEEEESCCH-H-HHHHHHHTTCEEEEEETTSC-GGG
T ss_pred             HHHHHHHHHHhCcCHHH--EEEcCCHHHHHHHHHHHHC---CCEEEEeCCCcH-H-HHHHHHHcCCeEEEEecCCc-ccc
Confidence            37999999999997665  9999999999999999885   888863 33333 2 23445667999999998 54 223


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCC-cEEEecccccCccCc----ccCCCCCCCcEE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNA-WHVLLDATGLVFGED----QLALALHRPDLV  278 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g-~~vlvDAaQsv~G~~----pldl~~l~~Dfl  278 (311)
                      ++.        ++     +++|.++..  .||.++|++++.+ ++..+ .++++|.+++..+..    ...+...+.+++
T Consensus       125 ~~~--------~~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~  191 (350)
T 3fkd_A          125 ADF--------SN-----MDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVM  191 (350)
T ss_dssp             SCC--------TT-----CSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEE
T ss_pred             Ccc--------CC-----CCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEE
Confidence            332        22     456655432  6999999999966 45544 699999999841111    122334456799


Q ss_pred             EEccccCcCCCCCc--eEEEEEeCCC
Q 021539          279 LCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       279 ~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +.|++| .+| +.|  +|+++.++++
T Consensus       192 ~~S~sK-~~~-~~G~r~G~~~~~~~~  215 (350)
T 3fkd_A          192 VYSFSH-AYG-IPGLRIGYIVANKDF  215 (350)
T ss_dssp             EEESHH-HHS-CGGGCCEEEECCHHH
T ss_pred             EecCch-hcc-CcchheEeEEeCHHH
Confidence            999999 887 334  8999886544

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.38  E-value=7.1e-12  Score=121.21  Aligned_cols=153  Identities=8%  Similarity=-0.062  Sum_probs=110.6

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcCh--HHHHHH-HHhCCcEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEES--DYIKGF-AAQKESKVI  196 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~--~~~~~l-a~~~G~~V~  196 (311)
                      ++......++.++++|++.|++  +  +++++|+++|+..+ ..+ .++||+|++ ...|+.  ..+..+ .+..|+++.
T Consensus        62 ~r~~~p~~~~l~~~la~l~g~~--~--~~~~~sG~~Ai~~~-~~l-~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~  135 (400)
T 3nmy_A           62 SRTHNPTRFAYERCVAALEGGT--R--AFAFASGMAATSTV-MEL-LDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFS  135 (400)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHH-HTT-SCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEE
T ss_pred             ccCCCHHHHHHHHHHHHHhCCC--C--EEEecCHHHHHHHH-HHH-cCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEE
Confidence            4555556678899999999984  2  66667779999985 444 468999874 444542  223333 445699998


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC--cccCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE--DQLALA  271 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~--~pldl~  271 (311)
                      .++.+      +.++|+++++++     +++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|+. |.  .+++  
T Consensus       136 ~v~~~------d~~~l~~~i~~~-----~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~-~~~~~~~~--  201 (400)
T 3nmy_A          136 FVDLT------DPAAFKAAIRAD-----TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFAS-PMLQRPLS--  201 (400)
T ss_dssp             EECTT------SHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH-HHHCCGGG--
T ss_pred             EECCC------CHHHHHHHhccC-----CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc-cccCChhh--
Confidence            88864      578899988764     567666433  6999999999976 6999999999999985 54  3444  


Q ss_pred             CCCCcEEEEccccCcCCCC-CceEE
Q 021539          272 LHRPDLVLCTLDNNTHAQP-LKITC  295 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P-~GiG~  295 (311)
                       +++|+++.|++| ++|+| ..+|.
T Consensus       202 -~g~div~~S~sK-~l~g~g~~~gG  224 (400)
T 3nmy_A          202 -LGADLVVHSATK-YLNGHSDMVGG  224 (400)
T ss_dssp             -GTCSEEEEETTT-TTTCSSSCCCE
T ss_pred             -cCCcEEEecCcc-ccCCCCCccee
Confidence             479999999999 66546 23555

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.36  E-value=2.7e-12  Score=122.30  Aligned_cols=164  Identities=8%  Similarity=-0.011  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHH--HHHhcCCCC-C---------CCEEEEc-cCcChHHHHHHHHhCCcEE
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAML--MIGESYPFF-K---------GNYYLTI-ISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealn--lv~~s~~~~-~---------Gd~Ils~-~eh~~~~~~~la~~~G~~V  195 (311)
                      .+.|+.||+++++++++  |+||+|+|++++  +++.++... +         |+.|+.. ..|+ . ....++..|.++
T Consensus        73 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~  148 (423)
T 3ez1_A           73 PSARALFAGYLDVKAEN--VLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYD-R-HFLLLQTLGFEL  148 (423)
T ss_dssp             HHHHHHHHHHTTSCGGG--EEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCH-H-HHHHHHHHTCEE
T ss_pred             HHHHHHHHHHhCCChhh--EEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcH-H-HHHHHHHcCCEE
Confidence            47999999999998765  999999999998  777765321 4         5887633 3333 2 223344559999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-e--cccccchhcHHH---HHH-H-HHCCcEEEecccccCc--cC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-P--VVVNGTRYSMHW---ISE-A-HRNAWHVLLDATGLVF--GE  265 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~--~~~tG~i~Pi~~---I~~-a-~~~g~~vlvDAaQsv~--G~  265 (311)
                      ..+|.+. ++ ++.++|++.++...   ++++|.+ +  ++-||.++|.++   |.+ | +++|+++++|.+++..  +.
T Consensus       149 ~~v~~~~-~g-~d~~~l~~~l~~~~---~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~  223 (423)
T 3ez1_A          149 LTVDMQS-DG-PDVDAVERLAGTDP---SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVE  223 (423)
T ss_dssp             EEEEEET-TE-ECHHHHHHHHHSCT---TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCS
T ss_pred             EeccCCC-CC-CCHHHHHHHHhhCC---CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCC
Confidence            9999875 44 89999999995211   2567654 3  236999999984   444 5 7899999999999830  11


Q ss_pred             ----cccCC-------CCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          266 ----DQLAL-------ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       266 ----~pldl-------~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                          .+.++       ...+.++++.|++|+ ++...++|+++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~~  270 (423)
T 3ez1_A          224 EDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASSEDN  270 (423)
T ss_dssp             SSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEECHHH
T ss_pred             CCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeCHHH
Confidence                11222       134577999999994 4424579999887654

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.34  E-value=3.5e-12  Score=122.20  Aligned_cols=170  Identities=11%  Similarity=0.051  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-----CCCCEEEEc-cCcCh--HHHHHHHH-----hC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-----FKGNYYLTI-ISEES--DYIKGFAA-----QK  191 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-----~~Gd~Ils~-~eh~~--~~~~~la~-----~~  191 (311)
                      ...++.++.++++++++++  .|+||+|+|||+++++..+. +     .+|++|++. ..+|.  .....+..     +.
T Consensus        86 ~~~~~l~~~la~~~~~~~~--~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~  163 (429)
T 1s0a_A           86 APAIELCRKLVAMTPQPLE--CVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHS  163 (429)
T ss_dssp             HHHHHHHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGG
T ss_pred             HHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcc
Confidence            3345777789999998665  49999999999998877531 1     137787643 33441  11111100     00


Q ss_pred             -----CcEEEEEeCCC-----CCcccCHHHHHhhhhccCCCCCceEEEEec--c-cccchhc----HHHHHH-HHHCCcE
Q 021539          192 -----ESKVIAAPETW-----LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--V-VNGTRYS----MHWISE-AHRNAWH  253 (311)
Q Consensus       192 -----G~~V~~vp~~~-----~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~-~tG~i~P----i~~I~~-a~~~g~~  253 (311)
                           ...+..+++..     ..+.+|.++|++++++..  ..+++|.+..  + .+|.++|    +++|.+ |+++|++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~  241 (429)
T 1s0a_A          164 LWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR--HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGIL  241 (429)
T ss_dssp             GGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT--TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCE
T ss_pred             cccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC--CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence                 11355566531     124578999999987421  1256777754  3 5899998    999966 6999999


Q ss_pred             EEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          254 VLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       254 vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      +++|.+|+ + |...    ++.....+|++++|  | .+|++ .++|++++++++.
T Consensus       242 li~De~~~~~-g~~g~~~~~~~~~~~~d~~t~s--K-~l~~G~~~iG~~~~~~~~~  293 (429)
T 1s0a_A          242 LIADEIATGF-GRTGKLFACEHAEIAPDILCLG--K-ALTGGTMTLSATLTTREVA  293 (429)
T ss_dssp             EEEECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTSSSCCEEEEECHHHH
T ss_pred             EEEeehhhCC-cccchHHHhhhcCCCCCEEEec--c-cccCCCccceEEEeCHHHH
Confidence            99999998 6 6432    23234578999988  8 55546 7899999987543

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.34  E-value=2.5e-12  Score=123.16  Aligned_cols=163  Identities=11%  Similarity=0.064  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHH--HHHHhcCCC-CC----------CCEEEEc-cCcChHHHHHHHHhCCcE
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAM--LMIGESYPF-FK----------GNYYLTI-ISEESDYIKGFAAQKESK  194 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTeal--nlv~~s~~~-~~----------Gd~Ils~-~eh~~~~~~~la~~~G~~  194 (311)
                      .+.|+.||+++++++++  |+||+|+|+++  ++++.++.. .+          |+.|+.. ..|+ . ....++..|++
T Consensus        81 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~-~-~~~~~~~~g~~  156 (427)
T 3ppl_A           81 VDIRQIWADLLGVPVEQ--VLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYD-R-HFSITERFGFE  156 (427)
T ss_dssp             HHHHHHHHHHHTSCGGG--EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCH-H-HHHHHHHTTCE
T ss_pred             HHHHHHHHHHhCCCcce--EEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcH-H-HHHHHHHcCCE
Confidence            47999999999998765  99999999999  577776521 13          8888633 3333 2 23345567999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-e--cccccchhcHH---HHHH-H-HHCCcEEEecccccC--cc
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-P--VVVNGTRYSMH---WISE-A-HRNAWHVLLDATGLV--FG  264 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~--~~~tG~i~Pi~---~I~~-a-~~~g~~vlvDAaQsv--~G  264 (311)
                      +..+|.+. ++ ++.++|+++++..    ++++|.+ +  ++-||.++|.+   +|.+ | +++|+++++|.+++.  .+
T Consensus       157 ~~~v~~~~-~g-~d~~~l~~~l~~~----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~  230 (427)
T 3ppl_A          157 MISVPMNE-DG-PDMDAVEELVKNP----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLT  230 (427)
T ss_dssp             EEEEEEET-TE-ECHHHHHHHTTST----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSS
T ss_pred             EEEeCCCC-CC-CCHHHHHHHHhcC----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccC
Confidence            99999875 55 8999999998521    2566654 3  23699999998   4544 5 789999999999974  02


Q ss_pred             Cc---ccCCC-------CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          265 ED---QLALA-------LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       265 ~~---pldl~-------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ..   ++++.       ..+.++++.|++| +++...++|+++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~G~r~G~~~~~~~l  277 (427)
T 3ppl_A          231 DEFPEVIDIVGLGEAAGNPNRFWAFTSTSK-ITLAGAGVSFFLTSAEN  277 (427)
T ss_dssp             SCCCCCCCHHHHHHHTTCTTSEEEEEESTT-TSCTTSSCEEEECCHHH
T ss_pred             CCCCCccchhhhhhccCCCCcEEEEechhh-ccCcCccEEEEEcCHHH
Confidence            11   22322       3467899999999 55423468888776543

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.33  E-value=2.6e-12  Score=123.98  Aligned_cols=165  Identities=9%  Similarity=0.010  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCC-----C----CEEEEccCcChHHHHHHHHhCCcEEEEE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFK-----G----NYYLTIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~-----G----d~Ils~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ..+.|+.+|+++|.  +  .|+||+|+|+|+++++.++. .+     |    |+|+....|.... .......|..+...
T Consensus        76 ~~~l~~~la~~~~~--~--~v~~t~~gt~A~~~al~~~~-~~~~~~~G~~~~d~Ii~~~~h~~t~-~~~~~~~~~~~~~~  149 (467)
T 2oqx_A           76 YYALAESVKNIFGY--Q--YTIPTHQGRGAEQIYIPVLI-KKREQEKGLDRSKMVAFSNYFFDTT-QGHSQINGCTVRNV  149 (467)
T ss_dssp             HHHHHHHHHHHHCC--S--EEEEEC--CCSHHHHHHHHH-HHHHHHHCCCTTTCEEEESSCCHHH-HHHHHHTTCEEEEC
T ss_pred             hHHHHHHHHHHhCc--C--cEEEcCCcHHHHHHHHHHHh-ccccccCCCCccceEEecccccccc-hhhhhccCcceeec
Confidence            45789999999987  2  49999999999998877652 34     6    7777555554321 11222345555432


Q ss_pred             ------eCC---CCCcccCHHHHHhhhhccCCCCCceEEEEec--ccc-cchhc---HHHHHH-HHHCCcEEEecccccC
Q 021539          199 ------PET---WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVN-GTRYS---MHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       199 ------p~~---~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~t-G~i~P---i~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                            +.+   ..++.+|.++|++++++.. ..++++|.+..  +.+ |.+.|   +++|.+ |+++|+++++|++|+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~-~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~  228 (467)
T 2oqx_A          150 YIKEAFDTGVRYDFKGNFDLEGLERGIEEVG-PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFA  228 (467)
T ss_dssp             BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC-GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHH
T ss_pred             cccccccCCCCCCccCCcCHHHHHHHHHhcC-CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhh
Confidence                  111   0145689999999997410 00146666643  255 77665   556655 6999999999988854


Q ss_pred             ----------ccCcccCCCC------CCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          263 ----------FGEDQLALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       263 ----------~G~~pldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                                .+...+++..      ..+|++++|+|| .+|.|.| |+++.+++
T Consensus       229 e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK-~~g~~~G-g~~~~~~~  281 (467)
T 2oqx_A          229 ENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKK-DAMVPMG-GLLCMKDD  281 (467)
T ss_dssp             HHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSS-TTCCSSC-EEEEECSG
T ss_pred             hhhhhcccccccccCccHHHHhhhhhccCCeEEEeccc-ccCCCCc-eEEEecCh
Confidence                      1223333322      248999999999 7775645 66666655

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.33  E-value=8.4e-12  Score=118.60  Aligned_cols=173  Identities=12%  Similarity=0.040  Sum_probs=110.2

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEE-EccCcCh--HHHHHHHHh-----C
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYL-TIISEES--DYIKGFAAQ-----K  191 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Il-s~~eh~~--~~~~~la~~-----~  191 (311)
                      .......+.|+.|+++++.+. ...|+||+|+|+|+++++.   .+. .+| .|+ ....+|.  ..+..+...     .
T Consensus        81 ~~~~~~~~l~~~la~~~~~~~-~~~v~~~~g~~~a~~~~~~~a~~~~-~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~  157 (426)
T 1sff_A           81 LAYEPYLELCEIMNQKVPGDF-AKKTLLVTTGSEAVENAVKIARAAT-KRS-GTIAFSGAYHGRTHYTLALTGKVNPYSA  157 (426)
T ss_dssp             EECHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHH-TCC-EEEEETTCCCCSSHHHHHHSSCCTTTTT
T ss_pred             cCCHHHHHHHHHHHHhCCccc-ccEEEEeCchHHHHHHHHHHHHHhh-CCC-eEEEECCCcCCCchHhhhhcCCcccccc
Confidence            334556789999999994232 1359999999999999876   442 345 554 3444442  212222110     0


Q ss_pred             Cc-----EEEEEeCCC----CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEE
Q 021539          192 ES-----KVIAAPETW----LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVL  255 (311)
Q Consensus       192 G~-----~V~~vp~~~----~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vl  255 (311)
                      ++     .+..+|.+.    .++.++.++|++.+++......+++|.+..+  .+|.+.|    +++|.+ |+++|++++
T Consensus       158 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li  237 (426)
T 1sff_A          158 GMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLI  237 (426)
T ss_dssp             TSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEE
T ss_pred             ccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence            11     266777753    1234688899988873100012567766433  4897887    888865 699999999


Q ss_pred             eccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          256 LDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       256 vDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +|.+|+ + +..    .++.....+|+++|  +| .+| | |  +|++++++++.+
T Consensus       238 ~De~~~~~-~~~g~~~~~~~~~~~~di~s~--sK-~~~-~-GlriG~~~~~~~~~~  287 (426)
T 1sff_A          238 ADEVQSGA-GRTGTLFAMEQMGVAPDLTTF--AK-SIA-G-GFPLAGVTGRAEVMD  287 (426)
T ss_dssp             EECTTTTT-TTTSSSSGGGGTTSCCSEEEE--CG-GGG-T-SSCCEEEEEEHHHHT
T ss_pred             Eechhhcc-CcccchhhhhhcCCCCCEEEE--cc-ccc-C-CCceEEEEEcHHHHh
Confidence            999999 5 532    13333345898855  49 888 6 7  699999876543

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.32  E-value=1.3e-12  Score=121.28  Aligned_cols=161  Identities=11%  Similarity=0.013  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE--EEEccCcChHH--HHHHHHhCCcEEEEEeCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY--YLTIISEESDY--IKGFAAQKESKVIAAPET  201 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~--Ils~~eh~~~~--~~~la~~~G~~V~~vp~~  201 (311)
                      ...++.|+.+++++|.+.    .+|++|+|+|+.+++..+. .+|+.  |++....|...  ...++...|.++..+|.+
T Consensus        48 ~~~~~l~~~la~~~~~~~----~i~~~~g~~a~~~a~~~~~-~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~  122 (359)
T 3pj0_A           48 AVIEDFETKIAKILGKQS----AVFFPSGTMAQQIALRIWA-DRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA  122 (359)
T ss_dssp             HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHH-HHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT
T ss_pred             HHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHH-hcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCc
Confidence            345689999999999842    4677899999998887763 34555  44432222111  111112348888888874


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEE--ecccc-cchhcHHHH---HH-HHHCCcEEEecccccCccCc------cc
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVN-GTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED------QL  268 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~t-G~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~------pl  268 (311)
                        ++.+|.++|+++ .++     +++|.+  +++.+ |.++|.+++   .+ |+++|+++++|++|.. +..      +.
T Consensus       123 --~~~~d~~~l~~~-~~~-----~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~  193 (359)
T 3pj0_A          123 --NQLLTIDDIKSL-REP-----VSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLW-EITPFYQKSAE  193 (359)
T ss_dssp             --TSCCCHHHHHTC-SSC-----CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCG-GGHHHHTCCHH
T ss_pred             --CCCcCHHHHHhc-cCC-----ceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchh-cchhhhCCCHH
Confidence              567899999877 433     466665  33444 899998876   44 5899999999999875 431      22


Q ss_pred             CCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          269 ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       269 dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++. .++|++++|+|| .+|+|.| |+++.++++.
T Consensus       194 ~~~-~~~d~~~~s~sK-~~~~~~g-g~~~~~~~l~  225 (359)
T 3pj0_A          194 EIC-ALFDSVYVSFYK-GIGGIAG-AILAGNDDFV  225 (359)
T ss_dssp             HHH-TTCSEEEEESSS-TTCCSSC-EEEEECHHHH
T ss_pred             Hhh-ccCCEEEEeccc-cCCCcce-EEEECCHHHH
Confidence            222 368999999999 5655866 7777766543

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.32  E-value=1.4e-11  Score=116.93  Aligned_cols=157  Identities=10%  Similarity=0.029  Sum_probs=106.1

Q ss_pred             HHHHHHHHHH--cC-CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcE-EEEEeCCCC
Q 021539          129 IQARNRALKH--CG-LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESK-VIAAPETWL  203 (311)
Q Consensus       129 e~aR~~IA~~--Lg-a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~-V~~vp~~~~  203 (311)
                      .+.|+.+|++  .| ++++  +|+||+|+|++++++...+  .+|+.|++. ..++.  ....++..|.+ +..+|.+. 
T Consensus        78 ~~lr~~la~~l~~g~~~~~--~v~~~~G~~~al~~~~~~~--~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~-  150 (400)
T 3asa_A           78 PALRQKLSEDFYRGFVDAK--EIFISDGAKVDLFRLLSFF--GPNQTVAIQDPSYPA--YLDIARLTGAKEIIALPCLQ-  150 (400)
T ss_dssp             HHHHHHHHHTTSTTSSCGG--GEEEESCHHHHHHHHHHHH--CSSCEEEEEESCCHH--HHHHHHHTTCSEEEEEECCG-
T ss_pred             HHHHHHHHHHHHcCCCCHH--HEEEccChHHHHHHHHHHc--CCCCEEEECCCCcHH--HHHHHHHcCCcceEecccch-
Confidence            4799999999  47 6554  4999999999999876544  578888643 34432  22334556888 88899864 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEec-c-cccchhcHHH---HHH-HHHCCcEEEeccccc-Cc--cCcccCCCCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGTRYSMHW---ISE-AHRNAWHVLLDATGL-VF--GEDQLALALHR  274 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQs-v~--G~~pldl~~l~  274 (311)
                      ++.+..+ +++.  +     .+++|.++. + .||.++|.++   |.+ |+++|+++++|.+|+ +.  |..+.++..++
T Consensus       151 ~~~~~~~-l~~~--~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  222 (400)
T 3asa_A          151 ENAFFPE-FPED--T-----HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIP  222 (400)
T ss_dssp             GGTTCCC-CCTT--C-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGST
T ss_pred             hcCcccC-hhhc--c-----CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCC
Confidence            2222211 2111  1     245665542 2 6999999765   444 689999999999998 41  22244554442


Q ss_pred             ----CcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          275 ----PDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       275 ----~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                          .++++.|++| +|| +.|  +|+++++++.
T Consensus       223 ~~~~~~i~~~s~sK-~~g-~~GlriG~~~~~~~~  254 (400)
T 3asa_A          223 DARFCAIEINSFSK-PLG-FAGIRLGWTVIPQEL  254 (400)
T ss_dssp             TGGGTEEEEEECCG-GGT-TTTCCCEEEECCTTC
T ss_pred             CCCCceEEEecchh-hcC-CcchheeEEeeChhh
Confidence                4599999999 888 557  7999998877

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.31  E-value=1.6e-11  Score=115.91  Aligned_cols=158  Identities=14%  Similarity=0.082  Sum_probs=108.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      ....++.|+.+|+++|++   ..|+||+|++ ++..+...+ .+.+|+.|+ ...+|++. . ..++..|+++..+|.+ 
T Consensus        90 ~~~~~~l~~~la~~~~~~---~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~-~-~~~~~~g~~~~~v~~~-  162 (401)
T 2bwn_A           90 TAYHRRLEAEIAGLHQKE---AALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASM-I-EGIKRNAGPKRIFRHN-  162 (401)
T ss_dssp             BHHHHHHHHHHHHHTTCS---EEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHH-H-HHHHHSCCCEEEECTT-
T ss_pred             hHHHHHHHHHHHHHhCCC---cEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHH-H-HHHHHcCCeEEEEcCC-
Confidence            455679999999999973   3599988877 544443332 134788886 44455532 2 2234569999888874 


Q ss_pred             CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc-c--------cCC
Q 021539          203 LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-Q--------LAL  270 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-p--------ldl  270 (311)
                           +.++|++.++.. +..++++|++++.  .+|.++|+++|.+ |+++|+++++|++|+. |.. +        .++
T Consensus       163 -----d~~~le~~l~~~-~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~~g~~~~~~~~~  235 (401)
T 2bwn_A          163 -----DVAHLRELIAAD-DPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAV-GMYGPRGAGVAERDGL  235 (401)
T ss_dssp             -----CHHHHHHHHHHS-CTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT-TTSSTTSCCHHHHHTC
T ss_pred             -----CHHHHHHHHHhh-ccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccc-cccCCCCceeeeccCc
Confidence                 567888888631 1012577777655  5899999999966 7999999999999996 532 1        111


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      . .++|+++.|++| .||. .| |+++.++
T Consensus       236 ~-~~~~i~~~s~sK-~~~~-~G-G~~~~~~  261 (401)
T 2bwn_A          236 M-HRIDIFNGTLAK-AYGV-FG-GYIAASA  261 (401)
T ss_dssp             G-GGCSEEEEESSS-TTCS-CC-EEEEECH
T ss_pred             c-ccCcEEEeechh-hccC-CC-CEEecCH
Confidence            1 146999999999 8883 46 8777654

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.30  E-value=5.5e-11  Score=112.94  Aligned_cols=155  Identities=14%  Similarity=0.092  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCcc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLR  206 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~  206 (311)
                      .++.++.+++++|++.    .+++.++|+|+..++.++ ..+||.|+.. ..|.. .. ...+..|.++..++.      
T Consensus       106 ~~~l~~~la~~~g~~~----~i~~~sGt~a~~~~l~~~-~~~gd~Vl~~~~~~~~-~~-~~~~~~g~~~~~~~~------  172 (409)
T 3kki_A          106 KPMIEKRLAKFTGFDE----CLLSQSGWNANVGLLQTI-CQPNTNVYIDFFAHMS-LW-EGARYANAQAHPFMH------  172 (409)
T ss_dssp             SCHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHH-CCTTCEEEEETTSCHH-HH-HHHHHTTCEEEEECT------
T ss_pred             HHHHHHHHHHHhCCCe----EEEecchHHHHHHHHHHh-cCCCCEEEECCCcCHH-HH-HHHHHcCCeEEEecC------
Confidence            3578999999999852    344455579998888776 4689998743 44432 22 223445888776654      


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcc---------cCCCCCC
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ---------LALALHR  274 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p---------ldl~~l~  274 (311)
                      .|.++|++.++++.    +++|.+...  .+|.+.|+++|.+ |+++|+++++|.+|+. |...         .++. .+
T Consensus       173 ~d~~~le~~l~~~~----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~-g~~g~~g~~~~~~~~~~-~~  246 (409)
T 3kki_A          173 NNCDHLRMLIQRHG----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSL-GTHGPNGAGLLAELGLT-RE  246 (409)
T ss_dssp             TCHHHHHHHHHHHC----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT-TTSSGGGCCHHHHHTCG-GG
T ss_pred             CCHHHHHHHHHhcC----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCcchhhcCCC-CC
Confidence            36889999998631    367666544  5999999999966 7999999999999987 5431         2222 36


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|+++.|++| .+| +. .|+++.+++..+
T Consensus       247 ~di~~~s~sK-~~~-~~-gg~v~~~~~~~~  273 (409)
T 3kki_A          247 VHFMTASLAK-TFA-YR-AGAIWCNNEVNR  273 (409)
T ss_dssp             CSEEEEESSS-TTC-SS-CEEEEESSSGGG
T ss_pred             CCEEEeecch-hhC-CC-ceEEEECHHHHH
Confidence            8999999999 777 43 488888877654

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.30  E-value=7.8e-12  Score=117.59  Aligned_cols=162  Identities=10%  Similarity=-0.027  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHc-CC--CCCCCeEEE--eCCHHHHHHHHHhcCC-CCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHC-GL--SEDEYLVLF--VPNYKEAMLMIGESYP-FFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~L-ga--~~dey~VvF--TsnaTealnlv~~s~~-~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.+|+++ +.  +++  +|+|  |+|+|+|+++++..+. +.+|++|+. ...|+.  ....++..|.++..+|.+
T Consensus        72 ~~lr~~la~~~~~~~~~~~--~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~  147 (394)
T 2ay1_A           72 PEFQKAMGELILGDGLKSE--TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPN--HVSIMNFMGLPVQTYRYF  147 (394)
T ss_dssp             HHHHHHHHHHHHGGGCCGG--GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH--HHHHHHHHTCCEEEEECE
T ss_pred             HHHHHHHHHHHhCCCCCcc--cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChh--HHHHHHHcCCceEEEecc
Confidence            47999999997 55  444  4999  9999999999887653 347888763 334442  223344458899999874


Q ss_pred             C-CCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHH---HHH-HHHCCcEEEecccccCccCc------cc
Q 021539          202 W-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGED------QL  268 (311)
Q Consensus       202 ~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~------pl  268 (311)
                      . .+..++.++|++.+++..  ..+.++.++..  .||.++|.++   |.+ |+++|+++++|.+|+..+..      ++
T Consensus       148 ~~~~~~~d~~~l~~~l~~~~--~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  225 (394)
T 2ay1_A          148 DAETRGVDFEGMKADLAAAK--KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGT  225 (394)
T ss_dssp             ETTTTEECHHHHHHHHHTCC--TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHH
T ss_pred             cccCCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHH
Confidence            1 246689999999987531  12456665433  6999998765   444 68899999999999851221      23


Q ss_pred             C-CCCCCC-cEEEEccccCcCCCCCc--eEEEEE
Q 021539          269 A-LALHRP-DLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       269 d-l~~l~~-Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      . +...+. ++++.|++| .|| +.|  +|++++
T Consensus       226 ~~~~~~~~~~i~~~s~sK-~~~-~~G~riG~~~~  257 (394)
T 2ay1_A          226 RLIASRIPEVLIAASCSK-NFG-IYRERTGCLLA  257 (394)
T ss_dssp             HHHHHHCSSEEEEEECTT-TTT-CGGGCEEEEEE
T ss_pred             HHHhhcCCCEEEEEeccC-CCc-CcCCccceEEE
Confidence            2 322233 467889999 888 667  599998

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.30  E-value=3.5e-11  Score=113.61  Aligned_cols=162  Identities=5%  Similarity=-0.109  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHcCCC------CCCCeEEE--eCCHHHHHHHHHhcCC--CCCCCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539          129 IQARNRALKHCGLS------EDEYLVLF--VPNYKEAMLMIGESYP--FFKGNYYL-TIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       129 e~aR~~IA~~Lga~------~dey~VvF--TsnaTealnlv~~s~~--~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      .+.|+.+|++++..      +++  |+|  |+|+|+|+++++.++.  ..+||.|+ ....|..  ....++..|.++..
T Consensus        74 ~~lr~~ia~~~~~~~~~~~~~~~--i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~--~~~~~~~~g~~~~~  149 (401)
T 7aat_A           74 ADFTRASAELALGENSEAFKSGR--YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGN--HTPIFRDAGLQLQA  149 (401)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTT--HHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHhcCCCccccccCc--eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchh--HHHHHHHcCCeeEe
Confidence            47899999998754      554  877  9999999998876542  25789886 3334432  12334556999999


Q ss_pred             EeCCC-CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHH---HHHH-HHHCCcEEEecccccCccCcccC-
Q 021539          198 APETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGEDQLA-  269 (311)
Q Consensus       198 vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~pld-  269 (311)
                      +|.+. .++.++.+++++.+++ .. ..++++.++.  +-||.+++.+   +|.+ |+++|+++++|.++.-.+..+.+ 
T Consensus       150 ~~~~~~~~~~~d~~~l~~~l~~-~~-~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~  227 (401)
T 7aat_A          150 YRYYDPKTCSLDFTGAMEDISK-IP-EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINR  227 (401)
T ss_dssp             EECEETTTTEECHHHHHHHHTT-SC-TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHH
T ss_pred             eeeeccccCccCHHHHHHHHHh-CC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccc
Confidence            99742 2567899988777764 11 1256766643  3699877755   4544 68999999999986531433221 


Q ss_pred             ----C----CCCCCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          270 ----L----ALHRPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       270 ----l----~~l~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                          +    ....-.+++.|++| .|| +.|  +|++++
T Consensus       228 ~~~~~~~~~~~~~~~i~~~S~sK-~~~-~~G~RiG~l~~  264 (401)
T 7aat_A          228 DAWALRHFIEQGIDVVLSQSYAK-NMG-LYGERAGAFTV  264 (401)
T ss_dssp             HTHHHHHHHHTTCCCEEEEECTT-TSC-CGGGCEEEEEE
T ss_pred             cHHHHHHHHhcCCcEEEEecCCc-ccc-cccCceEEEEE
Confidence                1    22356789999999 998 668  899987

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.28  E-value=1.4e-11  Score=119.75  Aligned_cols=160  Identities=10%  Similarity=-0.002  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHc-CCC-----CCCCeEEE--eCCHHHHHHHHHh--cCCCCCCCEEE-EccCcChHHHHHHHH----hCC
Q 021539          128 EIQARNRALKHC-GLS-----EDEYLVLF--VPNYKEAMLMIGE--SYPFFKGNYYL-TIISEESDYIKGFAA----QKE  192 (311)
Q Consensus       128 le~aR~~IA~~L-ga~-----~dey~VvF--TsnaTealnlv~~--s~~~~~Gd~Il-s~~eh~~~~~~~la~----~~G  192 (311)
                      ..+.|+.+++++ |.+     ++  +|+|  |+|+|+|+++++.  .+ +.+||.|+ ....|.. . ...++    ..|
T Consensus        96 ~~~lr~~ia~~l~g~~~~~~~~~--~i~~~~t~ggt~al~l~~~~~~~-~~~gd~Vlv~~p~~~~-~-~~~~~~~~~~~G  170 (448)
T 3meb_A           96 FPLFLEAAQFLMFGKDSKAAQEG--RIASCQSLSGTGSLHIGFEFLHL-WMPKAEFYMPSTTWPN-H-YGIYDKVFNKLK  170 (448)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTT--CEEEEEESHHHHHHHHHHHHHHH-HCTTCCEEEESSCCTH-H-HHHHHHHHCTTT
T ss_pred             hHHHHHHHHHHhcCCCccccCcC--cEEEEECCcHHHHHHHHHHHHHH-hCCCCEEEECCCCCHh-H-HHHHHhhHHhCC
Confidence            357999999998 876     34  4999  9999999988543  22 34788876 4444442 1 22334    679


Q ss_pred             cEEEEEeC-CCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCcc
Q 021539          193 SKVIAAPE-TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       193 ~~V~~vp~-~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                      .++..+|. +.. ++.+|.++|++.+++..  ..+.++.++  ++.||.++|.++   |.+ |+++|+++++|.++.-.+
T Consensus       171 ~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~--~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~  248 (448)
T 3meb_A          171 VPYKEYTYLRKDGELEIDFSNTKKDIQSAP--EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFA  248 (448)
T ss_dssp             SCCEEECCBCTTSCSSBCHHHHHHHHHHSC--TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTS
T ss_pred             CeEEEEeccccccCCCcCHHHHHHHHHhCC--CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence            99999998 543 36789999999998521  124565543  336999999776   544 588999999999955215


Q ss_pred             CcccC-----C----CCCCCcEEEEccccCcCCCCCc--eEEE
Q 021539          265 EDQLA-----L----ALHRPDLVLCTLDNNTHAQPLK--ITCL  296 (311)
Q Consensus       265 ~~pld-----l----~~l~~Dfl~~S~HK~l~G~P~G--iG~L  296 (311)
                      ..+++     +    ....-.+++.|++| .|| +.|  +|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~g-~~G~RiG~l  289 (448)
T 3meb_A          249 TGSFEADAFAVRMFVDAGVEVLVAQSFSK-NFG-LYGERIGCL  289 (448)
T ss_dssp             SSCHHHHTHHHHHHHHTTCCEEEEEECTT-TSC-CGGGCCEEE
T ss_pred             CCCcccCchhHHHHhhcCCcEEEEecccc-cCC-Cccccceee
Confidence            44321     1    11223477999999 888 667  7887

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.27  E-value=1.9e-11  Score=114.79  Aligned_cols=163  Identities=9%  Similarity=-0.002  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHcC------CCCCCCeEEE--eCCHHHHHHHHHhcCC-CCCCCEEEE-ccCcChHHHHHHHHhCCcEEEE
Q 021539          128 EIQARNRALKHCG------LSEDEYLVLF--VPNYKEAMLMIGESYP-FFKGNYYLT-IISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       128 le~aR~~IA~~Lg------a~~dey~VvF--TsnaTealnlv~~s~~-~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      ..+.|+.+|++++      +++++  |+|  |+|+|+|+++++..+. +.+||.|+. ...|+.  ....++..|.++..
T Consensus        71 ~~~lr~~la~~~~~~~~~~~~~~~--v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~  146 (396)
T 2q7w_A           71 IPEFGRCTQELLFGKGSALINDKR--ARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPN--HKSVFNSAGLEVRE  146 (396)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTH--HHHHHHHTTCEEEE
T ss_pred             CHHHHHHHHHHHhcCCCCcccccc--EEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchh--HHHHHHHcCCceEE
Confidence            3579999999983      23444  888  9999999999886543 357888864 334442  22334557999999


Q ss_pred             EeCCC-CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHH---HHH-HHHCCcEEEecccccCccCc----
Q 021539          198 APETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGED----  266 (311)
Q Consensus       198 vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~----  266 (311)
                      +|.+. ++..++.++|++.+++..  ..+.++.++.  +-||.++|.++   |.+ |+++|+++++|.+++..+..    
T Consensus       147 ~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~  224 (396)
T 2q7w_A          147 YAYYDAENHTLDFDALINSLNEAQ--AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEED  224 (396)
T ss_dssp             EECEETTTTEECHHHHHHHHTTCC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHH
T ss_pred             EecccCCCCCcCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccch
Confidence            99841 256789999999987521  1245665543  26999998765   444 58899999999998751221    


Q ss_pred             --ccC-CCC-CCCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          267 --QLA-LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       267 --pld-l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                        ++. +.. .+.++++.|++| .|| +.|  +|++++
T Consensus       225 ~~~~~~~~~~~~~~i~~~s~sK-~~~-~~G~riG~~~~  260 (396)
T 2q7w_A          225 AEGLRAFAAMHKELIVASSYSX-NFG-LYNERVGACTL  260 (396)
T ss_dssp             THHHHHHHHHCSCEEEEEECTT-TTT-CGGGCCEEEEE
T ss_pred             hHHHHHHHhcCCcEEEEEeccc-ccc-ccccccceEEE
Confidence              121 221 134688999999 888 678  699997

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.26  E-value=6.2e-12  Score=118.94  Aligned_cols=162  Identities=9%  Similarity=0.025  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC-----EEEEc--cCcChH--HHHHH--HHh
Q 021539          128 EIQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN-----YYLTI--ISEESD--YIKGF--AAQ  190 (311)
Q Consensus       128 le~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd-----~Ils~--~eh~~~--~~~~l--a~~  190 (311)
                      ..+.|+.||+++      +++++  +|+||+|+|+|+++++.++ ..+|+     .|+..  .+++..  .+...  ...
T Consensus        77 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~t~al~~~~~~l-~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~  153 (417)
T 3g7q_A           77 KTALLNALAVLLRETLGWDIEPQ--NIALTNGSQSAFFYLFNLF-AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS  153 (417)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCGG--GEEEESCHHHHHHHHHHHH-SBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred             cHHHHHHHHHHHHHHhCCCCCcc--cEEEeCCcHHHHHHHHHHH-cCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence            457899999998      56655  4999999999999999987 35655     66643  333311  11111  011


Q ss_pred             CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhc---HHHHHH-HHHCCcEEEecccccCcc
Q 021539          191 KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYS---MHWISE-AHRNAWHVLLDATGLVFG  264 (311)
Q Consensus       191 ~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G  264 (311)
                      .+..+..++.+..+..+|.++|+  ++++     +++|.++.  +.||+++|   +++|.+ |+++|+++++|.+|+. .
T Consensus       154 ~~~~~~~~~~~~~~~~~d~~~l~--~~~~-----~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~-~  225 (417)
T 3g7q_A          154 ARPNIELLPEGQFKYHVDFEHLH--IGEE-----TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGV-P  225 (417)
T ss_dssp             CCCEEEEEGGGEEEEECCGGGCC--CCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCT-T
T ss_pred             ccCcccccCCcccccccCHHHhc--cccC-----ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcc-c
Confidence            23455555543112346777776  4433     56766643  36999999   556644 6899999999999984 3


Q ss_pred             Cccc-----CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          265 EDQL-----ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       265 ~~pl-----dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                      ...+     .....+.++++.|++| +.+ | .++|+++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~G~r~G~~~~~~~~  267 (417)
T 3g7q_A          226 FPGIIFSEARPLWNPNIILCMSLSK-LGL-PGSRCGIIIANDKT  267 (417)
T ss_dssp             TTCCBCSCCCCCCCTTEEEEEESGG-GTC-TTSCCEEEECCHHH
T ss_pred             cccccccccccCCCCCEEEEEechh-ccC-CCcceEEEEeCHHH
Confidence            2222     2222467899999999 643 3 238888876544

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.26  E-value=2.5e-11  Score=114.62  Aligned_cols=159  Identities=11%  Similarity=0.015  Sum_probs=104.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC------CCCCEEE-EccCcChHHHHHHHHhCCcE---
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF------FKGNYYL-TIISEESDYIKGFAAQKESK---  194 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~------~~Gd~Il-s~~eh~~~~~~~la~~~G~~---  194 (311)
                      ....++.++.+++++|.  +  .|+||+|+|+|+++++..+..      ..++.|+ ....+|...... ++..|.+   
T Consensus        81 ~~~~~~l~~~la~~~g~--~--~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~-~~~~g~~~~~  155 (397)
T 2ord_A           81 NRPQMELAELLSKNTFG--G--KVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGS-LTATGQPKYQ  155 (397)
T ss_dssp             EHHHHHHHHHHHHTTTS--C--EEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHH-HHHSBCHHHH
T ss_pred             CHHHHHHHHHHHHhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhh-hhccCChhhc
Confidence            45567899999999984  3  499999999999988876521      1235664 434444211111 1122333   


Q ss_pred             ---------EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccc----hhcHHHHHH-HHHCCcEEEecc
Q 021539          195 ---------VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGT----RYSMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       195 ---------V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~----i~Pi~~I~~-a~~~g~~vlvDA  258 (311)
                               +..+|.+      |.++|++.++++     +++|.+...  .+|.    ..++++|.+ |+++|+++++|.
T Consensus       156 ~~~~p~~~~~~~~~~~------d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De  224 (397)
T 2ord_A          156 KPFEPLVPGFEYFEFN------NVEDLRRKMSED-----VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDE  224 (397)
T ss_dssp             GGGCSCCTTEEEECTT------CHHHHHHHCCTT-----EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             cccCCCCCCeeEecCC------CHHHHHHHhhcC-----eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence                     6666652      678898888753     567766533  5898    356777755 689999999999


Q ss_pred             ccc-CccCc--ccCCCC--CCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          259 TGL-VFGED--QLALAL--HRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       259 aQs-v~G~~--pldl~~--l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|+ + +..  ++.+..  ..+|+++|  +| .+|++.++|+++++++..
T Consensus       225 ~~~~~-~~~g~~~~~~~~~~~~d~~s~--sK-~~~~G~r~G~~~~~~~~~  270 (397)
T 2ord_A          225 VQCGM-GRTGKLFAYQKYGVVPDVLTT--AK-GLGGGVPIGAVIVNERAN  270 (397)
T ss_dssp             TTTTT-TTTSSSSHHHHHTCCCSEEEE--CG-GGGTTSCCEEEEECSTTC
T ss_pred             cccCC-ccCccchhhhhhCCCCCeeee--cc-ccCCCcCeEEEEEchHhc
Confidence            997 4 432  232222  23898866  69 666344699999998764

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.26  E-value=3.2e-11  Score=113.27  Aligned_cols=163  Identities=12%  Similarity=-0.031  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          129 IQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       129 e~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .+.|+.+|++++.      +++..+|+||+|+|+|++++++.+. +.+||.|+.. ..|+ . ....++..|.++..+|.
T Consensus        73 ~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~-~-~~~~~~~~g~~~~~~~~  150 (397)
T 3fsl_A           73 NCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWE-N-HVAIFAGAGFEVSTYPW  150 (397)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCH-H-HHHHHHHTTCCEEEECC
T ss_pred             HHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCch-h-HHHHHHHcCCceEEEee
Confidence            4789999999865      3331159999999999999854221 3578888643 3333 2 23345567999999998


Q ss_pred             C-CCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCccCcc-----c
Q 021539          201 T-WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVFGEDQ-----L  268 (311)
Q Consensus       201 ~-~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~G~~p-----l  268 (311)
                      . ..++.+|.++|++.+++..  ..+.++.++  ++.||.++|.+   +|.+ |+++|+++++|.+++- ....     .
T Consensus       151 ~~~~~~~~d~~~l~~~l~~~~--~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~  227 (397)
T 3fsl_A          151 YDEATNGVRFNDLLATLKTLQ--AGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQG-FGAGMEEDAY  227 (397)
T ss_dssp             EETTTTEECHHHHHHHHTTCC--TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTT-SSSCTTGGGH
T ss_pred             eeccCCcCcHHHHHHHHHhCC--CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchh-hccCcccccH
Confidence            2 1256789999999997421  125666654  33699998776   4544 6899999999999875 3221     1


Q ss_pred             C---C-CCCCCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          269 A---L-ALHRPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       269 d---l-~~l~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      .   + ...+.++++.|++| .|| +.|  +|++++
T Consensus       228 ~~~~~~~~~~~~i~~~S~SK-~~~-~~G~riG~~~~  261 (397)
T 3fsl_A          228 AIRAIASAGLPALVSNSFSK-IFS-LYGERVGGLSV  261 (397)
T ss_dssp             HHHHHHHTTCCEEEEEECTT-TTT-CGGGCCEEEEE
T ss_pred             HHHHHHhcCCCEEEEecccc-ccc-CcCCCeeEEEE
Confidence            1   1 12345688899999 888 668  788876

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.25  E-value=2.6e-11  Score=115.06  Aligned_cols=162  Identities=11%  Similarity=0.033  Sum_probs=110.2

Q ss_pred             HHHHHHHHHHHcCC------CCCCCeEEE--eCCHHHHHHHHHhcC-CCCCCCEEE-EccCcChHHHHHHHHhCCcEEEE
Q 021539          128 EIQARNRALKHCGL------SEDEYLVLF--VPNYKEAMLMIGESY-PFFKGNYYL-TIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       128 le~aR~~IA~~Lga------~~dey~VvF--TsnaTealnlv~~s~-~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      ..+.|+.+|++++.      ++++  |+|  |+|+|+|+++++..+ .+.+|+.|+ ....|+.  ....++..|.++..
T Consensus        75 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~  150 (412)
T 1yaa_A           75 LPSLTSNAAKIIFGTQSDALQEDR--VISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWAN--HMAIFENQGLKTAT  150 (412)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTT--HHHHHHTTTCCEEE
T ss_pred             cHHHHHHHHHHHhcCCCCCCCcce--EEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCcc--HHHHHHHcCceEEE
Confidence            35899999999842      4454  999  999999999873321 124788876 4444443  22344567999999


Q ss_pred             EeC-CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHH---HHH-HHHCCcEEEecccccCccCc----
Q 021539          198 APE-TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGED----  266 (311)
Q Consensus       198 vp~-~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~----  266 (311)
                      +|. +..+..++.++|++.++++.  ..+.++.++..  -||.++|.++   |.+ |+++|+++++|.++.-.+..    
T Consensus       151 v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~  228 (412)
T 1yaa_A          151 YPYWANETKSLDLNGFLNAIQKAP--EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK  228 (412)
T ss_dssp             EECEETTTTEECHHHHHHHHHHSC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH
T ss_pred             EeeecCCCCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc
Confidence            997 43356789999999987531  11345553432  5999998765   433 68999999999998531221    


Q ss_pred             ---cc-CCCCCC----CcEEEEccccCcCCCCCc--eEEEE
Q 021539          267 ---QL-ALALHR----PDLVLCTLDNNTHAQPLK--ITCLL  297 (311)
Q Consensus       267 ---pl-dl~~l~----~Dfl~~S~HK~l~G~P~G--iG~L~  297 (311)
                         ++ ++....    -++++.|++| .|| |.|  +|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~~GlriG~~~  267 (412)
T 1yaa_A          229 DAYAVRLGVEKLSTVSPVFVCQSFAK-NAG-MYGERVGCFH  267 (412)
T ss_dssp             HTHHHHHHHHHTTTTCCEEEEEECTT-TSC-CGGGCEEEEE
T ss_pred             hhHHHHHHHhcCCCCcceEEEeccCC-CCC-CcCCcceEEE
Confidence               22 332223    3588999999 998 878  69988

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.25  E-value=9.9e-11  Score=112.23  Aligned_cols=172  Identities=11%  Similarity=0.043  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcC--hHHHHHHH-----HhCC----
Q 021539          126 IPEIQARNRALKHCGLS-EDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEE--SDYIKGFA-----AQKE----  192 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~-~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~--~~~~~~la-----~~~G----  192 (311)
                      ...++.++.+++++|++ ++  +|+||+|+|||+++++..+....|++|++.. .+|  ......+.     .+.+    
T Consensus        86 ~~~~~l~~~la~~~~~~~~~--~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~  163 (419)
T 2eo5_A           86 IPQLELAKKLVTYSPGNFQK--KVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPF  163 (419)
T ss_dssp             HHHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCC
T ss_pred             HHHHHHHHHHHHhCCCCcCC--EEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCC
Confidence            33457778999999986 44  4999999999999888743111277876432 333  22122111     1112    


Q ss_pred             -cEEEEEeCCCCC----cc-----------cCHHHHH-hhhhccCCCCCceEEEEec-c-cccchhc----HHHHHH-HH
Q 021539          193 -SKVIAAPETWLD----LR-----------IKGSQLS-QNFRRKCKYTPKGLFSYPV-V-VNGTRYS----MHWISE-AH  248 (311)
Q Consensus       193 -~~V~~vp~~~~~----g~-----------id~~~L~-~~l~~~~~~~~t~LVs~~~-~-~tG~i~P----i~~I~~-a~  248 (311)
                       ..+..+|.+...    |.           ++.++|+ +.+++......+++|.+.. + .+|.++|    +++|.+ |+
T Consensus       164 ~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~  243 (419)
T 2eo5_A          164 MPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAK  243 (419)
T ss_dssp             CTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred             CCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHH
Confidence             357778775310    11           4578898 8887410001256776653 3 5798888    889866 68


Q ss_pred             HCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          249 RNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       249 ~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      ++|+++++|.+|+ + |...    ++.....+|+++||  | .||++ .++|++++++++.
T Consensus       244 ~~~~~li~DE~~~~~-g~~g~~~~~~~~~~~~d~~t~s--K-~~~~G~~riG~~~~~~~~~  300 (419)
T 2eo5_A          244 KYGILLVDDEVQMGL-GRTGKLFAIENFNTVPDVITLA--K-ALGGGIMPIGATIFRKDLD  300 (419)
T ss_dssp             HHTCEEEEECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTTTSCCEEEEEEGGGC
T ss_pred             HcCCEEEEeccccCC-ccCcchhhHHhcCCCCCEEEec--c-cccCCccceEEEEEchHhh
Confidence            9999999999998 5 6432    23334568999877  8 56535 7799999998754

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.25  E-value=4.7e-11  Score=113.51  Aligned_cols=165  Identities=8%  Similarity=0.006  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHcCC--CCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          129 IQARNRALKHCGL--SED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       129 e~aR~~IA~~Lga--~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      .+.|+.+++++..  .++ ..+|+||+|+|+|+++++.++ ..+||.|+.. ..++.  ....++..|.++..+|.+..+
T Consensus        83 ~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~v~~~~~~  159 (418)
T 3rq1_A           83 PDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNY-TEPGDEVLTADWYWGA--YRVICSDTGRTLVTYSLFDEH  159 (418)
T ss_dssp             HHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH-SCTTCEEEEESSCCTH--HHHHHHHTTCEEEEECSBCTT
T ss_pred             HHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHh-cCCCCEEEECCCCchh--HHHHHHHcCCEEEEEeeeCCC
Confidence            3678888887622  122 115999999999999999887 5789998643 33432  223455679999999985445


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe---cccccchhcHHHHHH----HH------HCCcEEEecccccCccCcc----
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP---VVVNGTRYSMHWISE----AH------RNAWHVLLDATGLVFGEDQ----  267 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~---~~~tG~i~Pi~~I~~----a~------~~g~~vlvDAaQsv~G~~p----  267 (311)
                      +.+|.++|++.+++......+.++.+.   ++-||.++|.+++.+    |+      ++|+++++|.++.-.+...    
T Consensus       160 ~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~  239 (418)
T 3rq1_A          160 NNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVR  239 (418)
T ss_dssp             SSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHH
T ss_pred             CCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHH
Confidence            678999999988751000013355543   346999999887743    34      7899999999974212111    


Q ss_pred             --c-CCCCCCCc---EEEEccccCcCCCCCc--eEEEEE
Q 021539          268 --L-ALALHRPD---LVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       268 --l-dl~~l~~D---fl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                        + .......|   +++.|++| .|| ..|  +|+++.
T Consensus       240 ~~~~~~~~~~~~~~~i~~~S~sK-~~~-~~G~r~G~~~~  276 (418)
T 3rq1_A          240 AFFNKFSHLPKEILTCVCYSLSK-GFT-MYGQRVGAMIG  276 (418)
T ss_dssp             GGGGGGTTCCTTEEEEEEEESTT-TTT-CCSSCCEEEEE
T ss_pred             HHHHHHHhcCCCceEEEEEeCCC-CCc-CcCCcceEEEE
Confidence              1 11223345   78889999 777 335  788887

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.24  E-value=9.6e-11  Score=122.11  Aligned_cols=169  Identities=11%  Similarity=0.002  Sum_probs=114.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      ...+.++++.+|+++|++   +.+++|+|+|.|++.++.++ ..+||.|++...-|.+... .....|+++++++.+++.
T Consensus       194 ~g~i~eaE~~lA~~fGa~---~a~~v~nGts~An~~ai~al-~~pGD~VLv~r~~H~S~~~-~l~lsGa~pv~v~~~~~~  268 (715)
T 3n75_A          194 SGPHKEAEQYIARVFNAD---RSYMVTNGTSTANKIVGMYS-APAGSTILIDRNCHKSLTH-LMMMSDVTPIYFRPTRNA  268 (715)
T ss_dssp             BTHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHH-CCTTCEEEEESSCCHHHHH-HHHHSCCEEEEECCCBCT
T ss_pred             cHHHHHHHHHHHHHhCCC---CceEECcHHHHHHHHHHHHh-CCCCCEEEECCCccHHHHH-HHHHcCCEEEEEeccccc
Confidence            345679999999999994   23666677789988888877 5789998754433322222 234569999998865321


Q ss_pred             ----ccc-----CHHHHHhhhhccCCCCCceEEEEec-ccccchhcHHHHHHH-HHCCcEEEecccccCccC--ccc--C
Q 021539          205 ----LRI-----KGSQLSQNFRRKCKYTPKGLFSYPV-VVNGTRYSMHWISEA-HRNAWHVLLDATGLVFGE--DQL--A  269 (311)
Q Consensus       205 ----g~i-----d~~~L~~~l~~~~~~~~t~LVs~~~-~~tG~i~Pi~~I~~a-~~~g~~vlvDAaQsv~G~--~pl--d  269 (311)
                          +.+     |.++|++++++.++.+..+++.++. +.+|.+.|+++|.++ +.+  .+++|.||+. +.  .+.  +
T Consensus       269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~--~livDEAH~~-~~~f~~~~~~  345 (715)
T 3n75_A          269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVK--SIHFDSAWVP-YTNFSPIYEG  345 (715)
T ss_dssp             TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCS--EEEEECTTCT-TGGGSGGGTT
T ss_pred             cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcC--cEEEcccccc-ccccCCcccc
Confidence                123     7999999998642111112444443 468999999999774 544  3799999986 53  221  1


Q ss_pred             CCCC----CCcEE---EEccccCcCCCCCceEEEEEeCCC
Q 021539          270 LALH----RPDLV---LCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       270 l~~l----~~Dfl---~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ...+    ++|++   +.|+|| .+|+|++.|++.++++.
T Consensus       346 ~~al~~g~~aD~vii~~~S~hK-tL~gltqgs~i~v~~~i  384 (715)
T 3n75_A          346 KCGMSGGRVEGKVIYETQSTHK-LLAAFSQASMIHVKGDV  384 (715)
T ss_dssp             SSTTSSSCCTTCEEEEEECHHH-HSSCCTTCEEEEEESCC
T ss_pred             ccccccCcCCCEEEEEEecccc-cccCCCCeeEEEeCchh
Confidence            2222    26876   999999 66668899999998763

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.24  E-value=3.5e-11  Score=113.25  Aligned_cols=161  Identities=12%  Similarity=0.072  Sum_probs=106.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC---------CCCCEEE-EccCcChH--HHHHHHHhCC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF---------FKGNYYL-TIISEESD--YIKGFAAQKE  192 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~---------~~Gd~Il-s~~eh~~~--~~~~la~~~G  192 (311)
                      ....++.++.+++++|.  +  .|+||+|+|+|+++++..+..         ..++.|+ ....||..  ....+....+
T Consensus        77 ~~~~~~l~~~la~~~g~--~--~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~  152 (392)
T 3ruy_A           77 SDQLGPWYEKVAKLTNK--E--MVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEE  152 (392)
T ss_dssp             ETTHHHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTT
T ss_pred             CHHHHHHHHHHHHhcCC--C--EEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChh
Confidence            34456899999999983  3  499999999999988764311         1256776 45556522  1111110000


Q ss_pred             ---------cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          193 ---------SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       193 ---------~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                               ..+..++.+      |.++|+++++++     +++|.+...  .+|.++|    +++|.+ |+++|+++++
T Consensus       153 ~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~  221 (392)
T 3ruy_A          153 YKRGFGPMLPGIIVIPYG------DLEALKAAITPN-----TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVA  221 (392)
T ss_dssp             TTTTCCSCCSSEEEECTT------CHHHHHHHCCTT-----EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred             hccccCCCCCCCeeeCcc------cHHHHHHHhccC-----eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence                     124444432      678999998753     577776543  6999999    999966 6999999999


Q ss_pred             ccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          257 DATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      |.+|+ + |..    .++.....+|+++||  | .+++- ..+|+++.+++..+
T Consensus       222 De~~~~~-~~~g~~~~~~~~~~~~d~~~~S--K-~l~gG~~~~G~~~~~~~~~~  271 (392)
T 3ruy_A          222 DEIQTGL-GRTGKVFACDWDNVTPDMYILG--K-ALGGGVFPISCAAANRDILG  271 (392)
T ss_dssp             ECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTTTSCCEEEEECHHHHT
T ss_pred             eechhCC-CccccchhhhccCCCCCEEEEc--h-hhhCChhhhEEEEECHHHHh
Confidence            99996 4 432    233334568999998  9 55521 23899999875543

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.24  E-value=4.4e-11  Score=115.01  Aligned_cols=160  Identities=10%  Similarity=-0.008  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcE--------
Q 021539          128 EIQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESK--------  194 (311)
Q Consensus       128 le~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~--------  194 (311)
                      .++.|+.+|+++    +++++  .|+||+|+|++++++ .++ +.+||.|+ ....|+..  ...++..|.+        
T Consensus       113 ~~~lr~~ia~~~~~g~~~~~~--~i~~t~G~~~al~~~-~~l-~~~gd~Vl~~~p~~~~~--~~~~~~~g~~g~~~~~~~  186 (449)
T 3qgu_A          113 QGALREAVASTFYGHAGRAAD--EIFISDGSKCDIARI-QMM-FGSKPTVAVQDPSYPVY--VDTSVMMGMTGDHNGTGF  186 (449)
T ss_dssp             CHHHHHHHHHHHHTTTTCCGG--GEEEESCHHHHHHHH-HHH-HCSSSCEEEEESCCTHH--HHHHHHHTCSCCBCSSSB
T ss_pred             cHHHHHHHHHHHHcCCCCCHH--HEEEccCHHHHHHHH-HHH-hCCCCEEEEcCCCChhH--HHHHHHcCCccccccccc
Confidence            357899999998    77655  499999999999988 555 36788876 44455521  1223334666        


Q ss_pred             --EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCc---
Q 021539          195 --VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVF---  263 (311)
Q Consensus       195 --V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~---  263 (311)
                        +..+|.+.. +.+..+ +++.  ++     +++|.+.  ++.||.++|.++   |.+ |+++|+++++|.+|+..   
T Consensus       187 ~~~~~~~~~~~-~~~~~~-~~~~--~~-----~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~  257 (449)
T 3qgu_A          187 DGIEYMVCNPD-NHFFPD-LSKA--KR-----TDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISN  257 (449)
T ss_dssp             TTEEEEECCGG-GTTCCC-GGGC--CC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC
T ss_pred             ceeEEEecccc-cCCcCC-hhHc--CC-----CCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC
Confidence              888888752 222211 1111  22     3555543  336999998655   444 58899999999999852   


Q ss_pred             cCcccCCCCC----CCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          264 GEDQLALALH----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       264 G~~pldl~~l----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      |..+.++..+    +.++++.|++| .|| +.|  +|+++++++..+
T Consensus       258 ~~~~~~~~~~~~~~~~~i~~~s~sK-~~g-~~G~r~G~~~~~~~~~~  302 (449)
T 3qgu_A          258 PDCPKTIYEIPGADEVAIETCSFSK-YAG-FTGVRLGWTVVPKALKY  302 (449)
T ss_dssp             TTSCSSGGGSTTGGGTEEEEEECSG-GGT-CTTCCCEEEECCTTCBC
T ss_pred             CCCCCCHhhccCCCCcEEEEecchh-hcC-CccceeEEEecCHHHHh
Confidence            2223344332    46799999999 787 335  899999988775

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.24  E-value=2.7e-11  Score=114.76  Aligned_cols=162  Identities=12%  Similarity=0.002  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHc-CC-----CCCCCeEEE--eCCHHHHHHHHHhcCC-CCCC-----CEEE-EccCcChHHHHHHHHhCCc
Q 021539          129 IQARNRALKHC-GL-----SEDEYLVLF--VPNYKEAMLMIGESYP-FFKG-----NYYL-TIISEESDYIKGFAAQKES  193 (311)
Q Consensus       129 e~aR~~IA~~L-ga-----~~dey~VvF--TsnaTealnlv~~s~~-~~~G-----d~Il-s~~eh~~~~~~~la~~~G~  193 (311)
                      .+.|+.+|+++ +.     ++++  |+|  |+|+|+|+++++..+. +.+|     +.|+ ....|+.  ....++..|.
T Consensus        77 ~~lr~~la~~~~~~~~~~~~~~~--v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~--~~~~~~~~g~  152 (412)
T 1ajs_A           77 AEFRTCASRLALGDDSPALQEKR--VGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN--HNGVFTTAGF  152 (412)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTH--HHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCCCCccCCCc--EEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHH--HHHHHHHcCC
Confidence            58999999999 53     4554  999  9999999998854221 3477     8876 4445553  2233455689


Q ss_pred             E-EEEEeCCC-CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHH---HHH-HHHCCcEEEecccccCccC
Q 021539          194 K-VIAAPETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGE  265 (311)
Q Consensus       194 ~-V~~vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~  265 (311)
                      + +..+|.+. .+..++.++|++.+++..  .++.++.++.  +-||.++|.++   |.+ |+++|+++++|.++.-.+.
T Consensus       153 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~  230 (412)
T 1ajs_A          153 KDIRSYRYWDTEKRGLDLQGFLSDLENAP--EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFAS  230 (412)
T ss_dssp             SCEEEEECEETTTTEECHHHHHHHHHHSC--TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT
T ss_pred             ceeEEEeeecCCCCccCHHHHHHHHHhCC--CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccC
Confidence            8 98888731 256789999999987521  1245665443  25999988764   444 5889999999999542143


Q ss_pred             c-------ccC-CCC-CCCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          266 D-------QLA-LAL-HRPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       266 ~-------pld-l~~-l~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      .       ++. +.. .+-++++.|++| .|| |.|  +|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~-~~G~riG~~~~  272 (412)
T 1ajs_A          231 GNLEKDAWAIRYFVSEGFELFCAQSFSK-NFG-LYNERVGNLTV  272 (412)
T ss_dssp             SCHHHHTHHHHHHHHTTCCEEEEEECTT-TSC-CGGGCEEEEEE
T ss_pred             CcccccchHHHHHhccCCcEEEEEeccc-ccC-CCCcceEEEEE
Confidence            2       122 211 123489999999 998 778  899998

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.23  E-value=3.6e-11  Score=120.29  Aligned_cols=163  Identities=6%  Similarity=-0.045  Sum_probs=113.1

Q ss_pred             HHHHHHHHHc----C--CCCC-CCeEEEeCCHHHHHHHHHhcC----CCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEE
Q 021539          130 QARNRALKHC----G--LSED-EYLVLFVPNYKEAMLMIGESY----PFFKGNYYLT-IISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~d-ey~VvFTsnaTealnlv~~s~----~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      +.|+.+|+++    +  .+.+ ..+|+||+|+|+|+++++.++    .+.+||.|++ ...|+ . ....++..|.++..
T Consensus       142 ~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~-~-~~~~~~~~g~~~~~  219 (533)
T 3f6t_A          142 NTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFT-P-YLRIPELKDYELVE  219 (533)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCH-H-HHTSGGGGGSEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcH-H-HHHHHHHcCCeEEE
Confidence            5667777766    2  2221 236999999999999999872    3578999864 44443 2 22233445888999


Q ss_pred             EeCCC---CCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHH---HH-HH-HCCcEEEecccccCccCcc
Q 021539          198 APETW---LDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWI---SE-AH-RNAWHVLLDATGLVFGEDQ  267 (311)
Q Consensus       198 vp~~~---~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I---~~-a~-~~g~~vlvDAaQsv~G~~p  267 (311)
                      +|++.   .+..++.++|++.++++     +++|.+..  +-+|.++|.+++   .+ |+ ++|+++++|.+++-.....
T Consensus       220 v~~~~~~~~~~~~d~~~l~~~l~~~-----~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~  294 (533)
T 3f6t_A          220 VDLHSYEKNDWEIEPNEIEKLKDPS-----IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF  294 (533)
T ss_dssp             ECCCEETTTTSEECHHHHHHHSCTT-----EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC
T ss_pred             EEecCCcccCCCCCHHHHHHHhCCC-----CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc
Confidence            88752   35678999999988754     56666542  259999999854   33 46 5799999999987412222


Q ss_pred             cCCCC--CCCcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          268 LALAL--HRPDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       268 ldl~~--l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      ..+..  .+.++++.|++| .|| +.|  +|+++++++
T Consensus       295 ~~~~~~~~~~~i~~~S~SK-~~g-~~G~RiG~l~~~~~  330 (533)
T 3f6t_A          295 KSIYSVVPYNTMLVYSYSK-LFG-CTGWRLGVIALNEK  330 (533)
T ss_dssp             CCHHHHSGGGEEEEEESHH-HHT-CGGGCEEEEEEESS
T ss_pred             cCHhhcCCCCEEEEecCcc-cCC-CcccceEEEEECcH
Confidence            22221  135699999999 998 668  999999887

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.23  E-value=1.6e-11  Score=114.02  Aligned_cols=158  Identities=10%  Similarity=0.019  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC--EEEEc-cCcChHH-HHHHHHhCCcEEEEEeCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN--YYLTI-ISEESDY-IKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd--~Ils~-~eh~~~~-~~~la~~~G~~V~~vp~~~~  203 (311)
                      .++.|+.+|+++|++  .  .+|++|+|+|+.+++..+. .+|+  .|+.. ..|.... ....+...|+++..+|.+  
T Consensus        49 ~~~l~~~la~~~~~~--~--~i~~~~G~~a~~~al~~~~-~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--  121 (357)
T 3lws_A           49 IEPFEQKFADVLGMD--D--AVFFPSGTMAQQVALRIWS-DETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAA--  121 (357)
T ss_dssp             HHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHHH-HHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCT--
T ss_pred             HHHHHHHHHHHhCCC--c--EEEecCcHHHHHHHHHHHh-hcCCCcEEEecccceeeeeccchhhhccCcEEEEecCC--
Confidence            458899999999983  2  5667889999988877653 3555  56543 3332111 011233458888888753  


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEe--cccc-cchhc---HHHHHH-HHHCCcEEEeccccc---C--ccCcccCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVN-GTRYS---MHWISE-AHRNAWHVLLDATGL---V--FGEDQLALA  271 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~t-G~i~P---i~~I~~-a~~~g~~vlvDAaQs---v--~G~~pldl~  271 (311)
                      ++.+|.++|+++.+       +++|.+.  ++.+ |.++|   +++|.+ |+++|+++++|+++.   .  .|....++.
T Consensus       122 ~~~~d~~~l~~~~~-------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  194 (357)
T 3lws_A          122 DRLMTLDEIKALPD-------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA  194 (357)
T ss_dssp             TSCCCHHHHHTCCS-------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred             CCCcCHHHHhcCcC-------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence            56789999987732       3455443  3345 99887   556654 689999999999886   2  022222222


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                       ..+|.+++|+|| .||+|.| |+++.++++
T Consensus       195 -~~~d~~~~s~sK-~~~~~~g-g~~~~~~~~  222 (357)
T 3lws_A          195 -GLFDSIYISFYK-GLGGIAG-AILAGPAAF  222 (357)
T ss_dssp             -TTSSEEEEESSS-TTCCSSC-EEEEECHHH
T ss_pred             -hcCCEEEEeccc-cCCCCce-EEEEcCHHH
Confidence             357999999999 7744988 888877654

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.23  E-value=2.6e-11  Score=116.25  Aligned_cols=161  Identities=11%  Similarity=0.086  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHH--HHHHhcCCC--CC---------CCEEE-EccCcChHHHHHHHHhCCcE
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAM--LMIGESYPF--FK---------GNYYL-TIISEESDYIKGFAAQKESK  194 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTeal--nlv~~s~~~--~~---------Gd~Il-s~~eh~~~~~~~la~~~G~~  194 (311)
                      .+.|+.||+++++++++  |+||+|+|+++  ++++..+..  .+         ++.|+ ....++ . ....++..|++
T Consensus        79 ~~lr~~ia~~~~~~~~~--i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~-~-~~~~~~~~g~~  154 (422)
T 3d6k_A           79 ADIRELWAEALGLPADL--VVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYD-R-HFTITEHFGFE  154 (422)
T ss_dssp             HHHHHHHHHHHTCCGGG--EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCH-H-HHHHHHHHTCE
T ss_pred             HHHHHHHHHHhCCChhH--EEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccH-H-HHHHHHHcCCE
Confidence            47999999999998765  99999999997  677666521  11         33565 333333 2 22334445999


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEE-Eec--ccccchhcHHHH---HH-HH-HCCcEEEecccccC--cc
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFS-YPV--VVNGTRYSMHWI---SE-AH-RNAWHVLLDATGLV--FG  264 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs-~~~--~~tG~i~Pi~~I---~~-a~-~~g~~vlvDAaQsv--~G  264 (311)
                      +..+|.+. ++ ++.++|++.+++.    ++++|. ++.  +-||.++|.+++   .+ |+ ++|+++++|.+++.  .+
T Consensus       155 ~~~v~~~~-~g-~d~~~l~~~l~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~  228 (422)
T 3d6k_A          155 MINVPMTD-EG-PDMGVVRELVKDP----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLS  228 (422)
T ss_dssp             EEEEEEET-TE-ECHHHHHHHHTST----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSS
T ss_pred             EEecCCCC-CC-CCHHHHHHHHhcC----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccC
Confidence            99999875 55 8999999998752    246655 442  259999999854   33 46 78999999999973  02


Q ss_pred             Cc---ccCC-------CCCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          265 ED---QLAL-------ALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       265 ~~---pldl-------~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      ..   ..++       ...+.++++.|++| +.+ | |  +|++++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~-~-GlriG~~~~~~~l  275 (422)
T 3d6k_A          229 DEFPIVHNVIEFAQAAGNPNRFWFMSSTSK-ITH-A-GSGVSFFASSKEN  275 (422)
T ss_dssp             SCCCCCCCHHHHHHHTTCTTCEEEEEESTT-TSC-T-TSSCEEEECCHHH
T ss_pred             CCCCCCcChhhHhhccCCCCcEEEEcChhh-hcC-c-ccceEEEEeCHHH
Confidence            11   1122       23457899999999 554 6 5  8999987654

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.17  E-value=8.2e-11  Score=112.50  Aligned_cols=163  Identities=9%  Similarity=-0.072  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          129 IQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       129 e~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      .+.|+.++++++.      +++..+|+||+|+|+|++++++.+. +.+||.|+.. ..++ .. ...++..|.++..+|.
T Consensus        95 ~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~-~~-~~~~~~~g~~~~~v~~  172 (420)
T 4f4e_A           95 AAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWE-NH-RALFDMAGFEVVAYPY  172 (420)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCH-HH-HHHHHHTTCCEEEEEC
T ss_pred             HHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcH-hH-HHHHHHcCCeEEEeee
Confidence            4788889988855      2331159999999999999854221 3578888643 3333 22 2334557999999998


Q ss_pred             -CCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecccccCccCcc-----c
Q 021539          201 -TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQ-----L  268 (311)
Q Consensus       201 -~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~p-----l  268 (311)
                       +..++.+|.++|++.++...  ..+.++.++  ++.||.++|.++   |.+ |+++|+++++|.++.- ....     .
T Consensus       173 ~~~~~~~~d~~~l~~~l~~~~--~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~-~~~~~~~~~~  249 (420)
T 4f4e_A          173 YDAKTNGVNFDGMLAALNGYE--PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQG-FGESIEADAA  249 (420)
T ss_dssp             EETTTTEECHHHHHHHHTTCC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT-SSSCTTGGGH
T ss_pred             eccccCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccccc-ccCCcchhhH
Confidence             22356789999999997421  124666654  336999988764   444 5889999999999764 2211     1


Q ss_pred             C---C-CCCCCcEEEEccccCcCCCCCc--eEEEEE
Q 021539          269 A---L-ALHRPDLVLCTLDNNTHAQPLK--ITCLLV  298 (311)
Q Consensus       269 d---l-~~l~~Dfl~~S~HK~l~G~P~G--iG~L~v  298 (311)
                      .   + ...+.++++.|++| .|| +.|  +|++++
T Consensus       250 ~~~~~~~~~~~~i~~~S~SK-~~~-~~G~RiG~~~~  283 (420)
T 4f4e_A          250 AVRLFAAANLNVFVSSSFSK-SFS-LYGERVGALSI  283 (420)
T ss_dssp             HHHHHHHTTCCEEEEEECTT-TTT-CGGGCEEEEEE
T ss_pred             HHHHHHhcCCCEEEEEeCCc-cCc-CcCCCcEEEEE
Confidence            1   1 12456799999999 888 667  899875

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.17  E-value=8.8e-11  Score=112.32  Aligned_cols=159  Identities=12%  Similarity=0.051  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH-HHHHHHHhCC---------c
Q 021539          129 IQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD-YIKGFAAQKE---------S  193 (311)
Q Consensus       129 e~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~-~~~~la~~~G---------~  193 (311)
                      ++.|+.+|+++    ++++++  |+||+|+|++++++ ..+ +.+||.|+ ....|+.. ....++...|         .
T Consensus       101 ~~l~~~ia~~~~~~~~~~~~~--i~~t~G~~~al~~l-~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  176 (432)
T 3ei9_A          101 KPLRAAIAKTFYGGLGIGDDD--VFVSDGAKCDISRL-QVM-FGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYG  176 (432)
T ss_dssp             HHHHHHHHHHHHTTTTCCGGG--EEEESCHHHHHHHH-HHH-HCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEET
T ss_pred             HHHHHHHHHHHHccCCCCcce--EEECCChHHHHHHH-HHH-cCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccC
Confidence            47889999986    776554  99999999999986 443 35788886 44556531 1112222223         3


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cC
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GE  265 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~  265 (311)
                      ++..+|.+.. ..+..+ +++  .++     +++|.+.  ++-||.++|.+++   .+ |+++|+++++|.+|+-.  +.
T Consensus       177 ~~~~~~~~~~-~~~~~~-l~~--~~~-----~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~  247 (432)
T 3ei9_A          177 NIEYMRCTPE-NGFFPD-LST--VGR-----TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD  247 (432)
T ss_dssp             TCEEEECCGG-GTTSCC-GGG--CCC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS
T ss_pred             ceEEeccCcc-cCCcCC-hhh--CCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCC
Confidence            6778887642 112111 222  111     3555543  3369999987665   33 58899999999999930  33


Q ss_pred             cccCCCC----CCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          266 DQLALAL----HRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       266 ~pldl~~----l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .+..+..    .+.++++.|++| .|| +.|  +|+++++++.
T Consensus       248 ~~~~~~~~~~~~~~~i~~~S~SK-~~g-~~G~r~G~~~~~~~~  288 (432)
T 3ei9_A          248 NPRSIFEIPGAEEVAMETASFSN-YAG-FTGVRLGWTVIPKKL  288 (432)
T ss_dssp             CCSSGGGSTTGGGTEEEEEESHH-HHC-TTTTCCEEEECCTTC
T ss_pred             CCCChhhcCCCCCeEEEEecchh-ccC-CcccceEEEEEChHH
Confidence            3334332    246799999999 887 446  8999998877

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.17  E-value=3.8e-10  Score=109.28  Aligned_cols=162  Identities=12%  Similarity=0.075  Sum_probs=102.1

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--------CCCC-CEEEEc-cCcChHH--HHHHHH--
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--------FFKG-NYYLTI-ISEESDY--IKGFAA--  189 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--------~~~G-d~Ils~-~eh~~~~--~~~la~--  189 (311)
                      .....++.++++++++|.  +  .|+||+|+|||++.++....        ..+| +.|++. ..+|...  ...+..  
T Consensus       105 ~~~~~~~l~~~la~~~g~--~--~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~  180 (433)
T 1z7d_A          105 FSVPLGICERYLTNLLGY--D--KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTK  180 (433)
T ss_dssp             EEHHHHHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------
T ss_pred             CCHHHHHHHHHHHhhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCc
Confidence            344566888999999984  3  49999999999998876531        1346 777643 3444221  111111  


Q ss_pred             --hCC-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchh----cHHHHHH-HHHCCcEEE
Q 021539          190 --QKE-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRY----SMHWISE-AHRNAWHVL  255 (311)
Q Consensus       190 --~~G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~----Pi~~I~~-a~~~g~~vl  255 (311)
                        +.+     ..+..+|.+      |.++|+++++..    .+++|.+..+  .+|.+.    ++++|.+ |+++|++++
T Consensus       181 ~~~~~~~p~~~~v~~~~~~------d~~~le~~l~~~----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI  250 (433)
T 1z7d_A          181 KCTSNFGPFAPQFSKVPYD------DLEALEEELKDP----NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFV  250 (433)
T ss_dssp             -----------CEEEECTT------CHHHHHHHHTST----TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEE
T ss_pred             cccccCCCCCCCeEEeCCC------CHHHHHHHhCCC----CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Confidence              011     244455542      678999988521    2566666543  579887    7889866 699999999


Q ss_pred             eccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCc---eEEEEEeCCCCcc
Q 021539          256 LDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKSFDT  305 (311)
Q Consensus       256 vDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~~~  305 (311)
                      +|.+|+ + |...    ++.....+|++++|  | .+| + |   +|+++.++++.+.
T Consensus       251 ~DEv~~g~-g~~g~~~~~~~~~~~~di~t~s--K-~l~-~-G~~~~G~v~~~~~~~~~  302 (433)
T 1z7d_A          251 ADEVQTGL-GRTGKLLCVHHYNVKPDVILLG--K-ALS-G-GHYPISAVLANDDIMLV  302 (433)
T ss_dssp             EECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGG-T-TSSCCEEEEECHHHHTT
T ss_pred             EecCccCC-CcCCcchhhHhcCCCCCEEEEC--c-ccc-C-CCCCeEEEEECHHHHhh
Confidence            999997 4 4322    12223468998665  9 777 3 5   9999998865543

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.16  E-value=8e-11  Score=113.54  Aligned_cols=170  Identities=11%  Similarity=0.036  Sum_probs=108.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C------CCCCEEEE-ccCcCh--HHHHHHHH----h
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F------FKGNYYLT-IISEES--DYIKGFAA----Q  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~------~~Gd~Ils-~~eh~~--~~~~~la~----~  190 (311)
                      ....++.++.++++++++++  .|+||+|+|+|+++++..+. +      .+++.|++ ...+|.  .....+..    +
T Consensus        92 ~~~~~~l~~~la~~~~~~~~--~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~  169 (449)
T 3a8u_X           92 HPLSFQLAEKITDLTPGNLN--HVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNR  169 (449)
T ss_dssp             CHHHHHHHHHHHTTSSTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhc
Confidence            34556899999999987654  49999999999998877542 1      14677764 444442  21111110    1


Q ss_pred             CC-----cEEEEEeCCCCCc----ccC--------HHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-
Q 021539          191 KE-----SKVIAAPETWLDL----RIK--------GSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-  246 (311)
Q Consensus       191 ~G-----~~V~~vp~~~~~g----~id--------~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-  246 (311)
                      .+     ..+..+++.....    .+|        .++|++.+++.. ...+++|.+..+  .+|.+.|    +++|.+ 
T Consensus       170 ~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l  248 (449)
T 3a8u_X          170 KLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD-ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREI  248 (449)
T ss_dssp             TTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred             cccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC-CCCEEEEEEcCccCCCCCccCCHHHHHHHHHH
Confidence            11     1345555432000    135        888998887310 002466666543  5899999    999966 


Q ss_pred             HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCc---eEEEEEeCCCC
Q 021539          247 AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKSF  303 (311)
Q Consensus       247 a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~  303 (311)
                      |+++|+++++|.+|+ + |...    ++.....+|++++|  | .+| + |   +|++++++++.
T Consensus       249 ~~~~~~~li~Dev~~~~-g~~g~~~~~~~~~~~~di~s~s--K-~l~-~-G~~~~G~~~~~~~~~  307 (449)
T 3a8u_X          249 CNQHNILLVFDEVITGF-GRTGSMFGADSFGVTPDLMCIA--K-QVT-N-GAIPMGAVIASTEIY  307 (449)
T ss_dssp             HHHHTCEEEEECTTTTT-TTTSSSSHHHHHTCCCSEEEEC--G-GGG-T-TSSCCEEEEEEHHHH
T ss_pred             HHHhCCEEEEeccccCc-cccCcchhhhhcCCCCCEEEEc--c-ccc-C-CCCceEEEEECHHHH
Confidence            699999999999994 7 7432    22223458988776  9 666 4 6   99999987543

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.16  E-value=3e-10  Score=112.31  Aligned_cols=163  Identities=6%  Similarity=-0.097  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      .+.|+.||++++      ++++  +|++|+|+|+|+++++..+.+.+||.|+. ...|. . +...++..|.++..+|.+
T Consensus       137 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~~~~~  212 (500)
T 3tcm_A          137 HGLRDAIASGIASRDGFPANAD--DIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYP-L-YSASIALHGGALVPYYLN  212 (500)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCGG--GEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCT-H-HHHHHHHTTCEEEEEECB
T ss_pred             HHHHHHHHHHHHhhcCCCCCcc--cEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcH-h-HHHHHHHcCCEEEEEecc
Confidence            367888888774      5554  49999999999999999885468888864 34444 2 223345569999999987


Q ss_pred             CC-CcccCHHHHHhhhhccCC-CCCceEEEEec--ccccchhcHHHH---HH-HHHCCcEEEecccccCccCc-----cc
Q 021539          202 WL-DLRIKGSQLSQNFRRKCK-YTPKGLFSYPV--VVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED-----QL  268 (311)
Q Consensus       202 ~~-~g~id~~~L~~~l~~~~~-~~~t~LVs~~~--~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~-----pl  268 (311)
                      .. +..++.++|++.+++... ..++++|.+..  +-||.++|.+++   .+ |+++|+++++|.++.. ...     ..
T Consensus       213 ~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~-~~~~~~~~~~  291 (500)
T 3tcm_A          213 ESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE-NIYVDNKKFH  291 (500)
T ss_dssp             TTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCC
T ss_pred             cccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccc-cccCCCCCCC
Confidence            53 236899999999875200 00145655542  259999997665   33 5889999999999875 221     12


Q ss_pred             CCC---------CCCCc-EEEEccccCcC-CCCCc--eEEEEE
Q 021539          269 ALA---------LHRPD-LVLCTLDNNTH-AQPLK--ITCLLV  298 (311)
Q Consensus       269 dl~---------~l~~D-fl~~S~HK~l~-G~P~G--iG~L~v  298 (311)
                      ++.         .-+++ +++.|++| .| | +.|  +|++++
T Consensus       292 s~~~~~~~~~~~~~~~~~i~~~S~SK-~~~g-~~G~R~G~~~~  332 (500)
T 3tcm_A          292 SFKKIVRSLGYGEEDLPLVSYQSVSK-GYYG-ECGKRGGYFEI  332 (500)
T ss_dssp             CHHHHHHHTTCSSSCCCEEEEEESSS-TTTC-CGGGCCEEEEE
T ss_pred             cHHHHHHHhccccCCeEEEEEecCCc-cCCC-CCccceEEEEE
Confidence            211         11233 55669999 55 6 445  688887

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.15  E-value=2.3e-10  Score=108.00  Aligned_cols=160  Identities=14%  Similarity=0.099  Sum_probs=106.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C-----CCCCEEE-EccCcChH--HHHHH-------
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F-----FKGNYYL-TIISEESD--YIKGF-------  187 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~-----~~Gd~Il-s~~eh~~~--~~~~l-------  187 (311)
                      .....++.++.+++++|.  +  .|+||+|+|||++.++..+. .     .+++.|+ ....+|..  ....+       
T Consensus        76 ~~~~~~~l~~~la~~~~~--~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~  151 (395)
T 3nx3_A           76 YNENIAAAAKNLAKASAL--E--RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQ  151 (395)
T ss_dssp             BCHHHHHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHH
T ss_pred             CCHHHHHHHHHHHHhcCC--C--eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccc
Confidence            445567899999999983  3  49999999999998776431 1     2457775 34444411  11100       


Q ss_pred             --HHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecc
Q 021539          188 --AAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       188 --a~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDA  258 (311)
                        ....+..+..+|.+      |.++|+++++++     +++|.+..+  .+|.+.|    +++|.+ |+++|+++++|.
T Consensus       152 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De  220 (395)
T 3nx3_A          152 KPFKPLISGVKFAKYN------DISSVEKLVNEK-----TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADE  220 (395)
T ss_dssp             GGGCSCCSCEEEECTT------CHHHHHTTCCTT-----EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             cccCCCCCCcEEeCCC------CHHHHHHhccCC-----eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence              01113455556543      578898888753     466665444  5898988    888866 699999999999


Q ss_pred             ccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          259 TGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       259 aQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      +|+ + |...    ++.....+|++++|  | .+|++.++|+++++++.
T Consensus       221 v~~~~-g~~g~~~~~~~~~~~~d~~t~s--K-~~~~G~~~G~~~~~~~~  265 (395)
T 3nx3_A          221 IQCGM-GRSGKFFAYEHAQILPDIMTSA--K-ALGCGLSVGAFVINQKV  265 (395)
T ss_dssp             TTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGTTTSCCEEEEECHHH
T ss_pred             cccCC-CcCCcchhHHhcCCCCCEEEec--c-cccCCCceEEEEEchhh
Confidence            998 4 5432    22333568999888  8 44435579999998776

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.13  E-value=3.1e-10  Score=106.88  Aligned_cols=159  Identities=12%  Similarity=0.025  Sum_probs=102.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCCCEEE-EccCcCh--HHHHHHHHh----
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKGNYYL-TIISEES--DYIKGFAAQ----  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~Gd~Il-s~~eh~~--~~~~~la~~----  190 (311)
                      ....++.++.+++++|.+    .|+||+|+|+|+++++..+..       ..++.|+ ....+|.  .....+...    
T Consensus        80 ~~~~~~l~~~la~~~~~~----~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~  155 (406)
T 4adb_A           80 NEPVLRLAKKLIDATFAD----RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYS  155 (406)
T ss_dssp             CHHHHHHHHHHHHHSSCS----EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGT
T ss_pred             CHHHHHHHHHHHhhCCCC----eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCcccc
Confidence            445678999999999874    499999999999998876521       1236665 4444442  222221110    


Q ss_pred             -----CCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccch-----hcHHHHHH-HHHCCcEEEecc
Q 021539          191 -----KESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTR-----YSMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       191 -----~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i-----~Pi~~I~~-a~~~g~~vlvDA  258 (311)
                           .+..+..+|.+      |.++|++.++++     +++|.+..+ -+|.+     .++++|.+ |+++|+++++|.
T Consensus       156 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~~-----~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De  224 (406)
T 4adb_A          156 QDFAPLPADIRHAAYN------DINSASALIDDS-----TCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDE  224 (406)
T ss_dssp             GGGCSCCSSEEEECTT------CHHHHHTTCSTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             ccCCCCCCCceEeCCC------cHHHHHHHhcCC-----eEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence                 01234444432      578898888754     567666544 45543     46778765 699999999999


Q ss_pred             ccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          259 TGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       259 aQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      +|+ + |...    ++.....+|+++|  +| .+| | ..+|+++.++++.
T Consensus       225 ~~~~~-~~~g~~~~~~~~~~~~d~~t~--sK-~~~-~G~r~G~~~~~~~~~  270 (406)
T 4adb_A          225 VQTGV-GRTGELYAYMHYGVTPDLLTT--AK-ALG-GGFPVGALLATEECA  270 (406)
T ss_dssp             TTTTT-TTTSSSSHHHHHTCCCSEEEE--CG-GGG-TTSCCEEEEECHHHH
T ss_pred             cccCC-CccchhHHHHhcCCCCCEEEe--ch-hhc-CCCCeEEEEEcHHHH
Confidence            996 3 4321    2222356898866  99 777 4 2399999987654

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.12  E-value=2e-10  Score=113.94  Aligned_cols=184  Identities=10%  Similarity=-0.003  Sum_probs=116.2

Q ss_pred             HHhcCCCCcchhhhh-HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-C--CCCCCEEEEccCcChHHHHH
Q 021539          111 DILSKKTSFKGNFIS-IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-P--FFKGNYYLTIISEESDYIKG  186 (311)
Q Consensus       111 ~~l~~~ss~~G~~~~-~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~--~~~Gd~Ils~~eh~~~~~~~  186 (311)
                      |++.-+....|.... ...++.-..+.+++|.+. ....+|++|+|.+.+..+-+. .  ..+++.|+.+..-|....+.
T Consensus        82 d~l~~~~~~~~~~~~~~~e~~~~~~~~~~lGlp~-~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kA  160 (450)
T 3bc8_A           82 DISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHS-VASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS  160 (450)
T ss_dssp             -----CCSBHHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH
T ss_pred             HHHHhCccccCCcHHHHHHHHHHHHHHHhCCCCC-CceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHH
Confidence            444322244444433 334577788888999964 446799999996655433322 1  11256776444444333333


Q ss_pred             HHHhCCcEEEEEeC---CCCCcccCHHHHHhhhhccCCCCCceEEEEecccc--cchhcHHHHHH-HHHCCcEEEecccc
Q 021539          187 FAAQKESKVIAAPE---TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVN--GTRYSMHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       187 la~~~G~~V~~vp~---~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~t--G~i~Pi~~I~~-a~~~g~~vlvDAaQ  260 (311)
                       +.-.|+..++++.   +. .+.+|.+.|+++|++... ..+.+|+.+...+  |..-||++|++ ||++|+++|||+|+
T Consensus       161 -l~l~Gl~p~~v~~~~~~~-~~~id~~~le~aI~~~~~-~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~  237 (450)
T 3bc8_A          161 -MVTAGFEPVVIENVLEGD-ELRTDLKAVEAKIQELGP-EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAY  237 (450)
T ss_dssp             -HHHTTCEEEEECCEEETT-EEECCHHHHHHHHHHHCG-GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTT
T ss_pred             -HHHcCCeeEEEEeeecCc-cCCcCHHHHHHHHHhcCC-CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCC
Confidence             2335888777754   33 678999999999976420 1234444444444  48899999976 69999999999998


Q ss_pred             cCccCcccC-C--CC---CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          261 LVFGEDQLA-L--AL---HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       261 sv~G~~pld-l--~~---l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      .+ -...+. +  +.   -++|++++|.|| +++.|.|.++|++|+
T Consensus       238 G~-~~~~~~~l~~~a~~~~~AD~~v~S~HK-~l~a~~~~~~l~~rd  281 (450)
T 3bc8_A          238 GL-QSSKCMHLIQQGARVGRIDAFVQSLDK-NFMVPVGGAIIAGFN  281 (450)
T ss_dssp             TT-TCHHHHHHHHHHHHHSCCCEEEEEHHH-HHSCCSSCEEEEESC
T ss_pred             ch-hhhhhHhHHHHHhcccCCCEEEECCcc-CCCchhccEEEEecC
Confidence            86 322211 1  11   279999999999 555599999999974

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.09  E-value=6.1e-10  Score=107.09  Aligned_cols=162  Identities=9%  Similarity=0.045  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC------CCC-CEEE-EccCcCh--HHHHHHHH----
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF------FKG-NYYL-TIISEES--DYIKGFAA----  189 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~------~~G-d~Il-s~~eh~~--~~~~~la~----  189 (311)
                      .....++.++++++++|.  +  .|+||+|+|||+++++..+..      .+| +.|+ ....+|.  ..+..+..    
T Consensus        97 ~~~~~~~l~~~la~~~g~--~--~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~  172 (420)
T 2pb2_A           97 TNEPALRLGRKLIDATFA--E--RVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKY  172 (420)
T ss_dssp             CCHHHHHHHHHHHHHSSC--S--EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHH
T ss_pred             CCHHHHHHHHHHHhhCCC--C--eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccc
Confidence            345567899999999984  3  499999999999988876521      035 4665 3334442  22211110    


Q ss_pred             hCCc-----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccc----hhcHHHHHH-HHHCCcEEEec
Q 021539          190 QKES-----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGT----RYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       190 ~~G~-----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~----i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                      +.++     .+..+|.+      |.++|++.++++     +++|.+...  .+|.    ..++++|.+ |+++|+++++|
T Consensus       173 ~~~~~p~~~~~~~~~~~------d~~~le~~i~~~-----~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~D  241 (420)
T 2pb2_A          173 SDGFGPKPADIIHVPFN------DLHAVKAVMDDH-----TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFD  241 (420)
T ss_dssp             HTTSSSCCSCEEEECTT------CHHHHHHHCCTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccCCCCCCCeEEecCC------CHHHHHHHhccC-----ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEE
Confidence            1111     25555542      678899888753     567666443  4565    356777765 69999999999


Q ss_pred             cccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          258 ATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .+|+ + |...    ++.....+|+++|  .| .+|+...+|++++++++.+
T Consensus       242 ev~~g~-~~~g~~~~~~~~~~~~diit~--sK-~l~~G~~iG~~~~~~~l~~  289 (420)
T 2pb2_A          242 EVQCGM-GRTGDLFAYMHYGVTPDILTS--AK-ALGGGFPVSAMLTTQEIAS  289 (420)
T ss_dssp             CTTTTT-TTTSSSSHHHHHTCCCSEEEE--CG-GGGTTSCCEEEEECHHHHT
T ss_pred             cCCcCc-ccCCcHHHHHhcCCCCCeEEe--cc-cccCCCceEEEEEhHHHHH
Confidence            9996 3 4321    1222346899865  59 6663335999999876544

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.07  E-value=8e-10  Score=107.31  Aligned_cols=159  Identities=12%  Similarity=-0.022  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--------CCCC-CEEEE-ccCcCh--HHHHHHHH----
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--------FFKG-NYYLT-IISEES--DYIKGFAA----  189 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--------~~~G-d~Ils-~~eh~~--~~~~~la~----  189 (311)
                      ...++.++.+++++|.  +  .|+||+|+|||++.++..+.        ..+| +.|++ ...+|.  .....+..    
T Consensus       118 ~~~~~l~~~la~~~g~--~--~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~  193 (439)
T 2oat_A          118 NVLGEYEEYITKLFNY--H--KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS  193 (439)
T ss_dssp             SSHHHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHH
T ss_pred             HHHHHHHHHHHHhcCC--C--EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhc
Confidence            3456788899999984  3  49999999999998876531        1245 67753 334442  11111100    


Q ss_pred             hCC-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchh----cHHHHHH-HHHCCcEEEec
Q 021539          190 QKE-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRY----SMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       190 ~~G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~----Pi~~I~~-a~~~g~~vlvD  257 (311)
                      +.+     ..+..+|.+      |.++|++.++..    ++++|.+..+  .+|.+.    ++++|.+ |+++|+++++|
T Consensus       194 ~~~~~p~~~~v~~~~~~------d~~~le~~l~~~----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~D  263 (439)
T 2oat_A          194 YDGFGPFMPGFDIIPYN------DLPALERALQDP----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIAD  263 (439)
T ss_dssp             HTTSCSCCTTEEEECSS------CHHHHHHHTTST----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCCCCCeEEeCCC------CHHHHHHHhCCC----CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence            111     356666642      678899888521    2566666433  579887    7999966 69999999999


Q ss_pred             cccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCc---eEEEEEeCCCCc
Q 021539          258 ATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~~~  304 (311)
                      .+|. + |...    ++.....+|++++  .| .+| + |   +|+++.++++.+
T Consensus       264 Ev~~g~-g~~g~~~~~~~~~~~~Di~t~--sK-~l~-~-G~~~~G~v~~~~~~~~  312 (439)
T 2oat_A          264 EIQTGL-ARTGRWLAVDYENVRPDIVLL--GK-ALS-G-GLYPVSAVLCDDDIML  312 (439)
T ss_dssp             CTTTTT-TTTSSSSGGGGGTCCCSEEEE--CG-GGG-T-TSSCCEEEEECHHHHT
T ss_pred             ccccCC-ccCCcchhHHHhCCCCcEEEe--cc-ccc-C-CCCCeEEEEECHHHHh
Confidence            9996 3 4321    2222346898855  49 666 3 5   999999876544

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.05  E-value=3.2e-10  Score=110.25  Aligned_cols=170  Identities=15%  Similarity=0.080  Sum_probs=109.0

Q ss_pred             hhHHHHHHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhcCC-C------------CCCCEEEEc-cCcChH--HHHH
Q 021539          124 ISIPEIQARNRALKHCG-LSEDEYLVLFVPNYKEAMLMIGESYP-F------------FKGNYYLTI-ISEESD--YIKG  186 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lg-a~~dey~VvFTsnaTealnlv~~s~~-~------------~~Gd~Ils~-~eh~~~--~~~~  186 (311)
                      .....++.++.++++++ .+++  .|+||+|+|||++.++.... +            .+|+.|++. ..+|..  .+..
T Consensus        99 ~~~~~~~la~~la~~~~~~~~~--~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~  176 (449)
T 2cjg_A           99 YSVAMARFVETFARVLGDPALP--HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLS  176 (449)
T ss_dssp             CCHHHHHHHHHHHHHHCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGG
T ss_pred             CCHHHHHHHHHHHHhcCCCCCC--EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhh
Confidence            34455678889999997 3333  59999999999998765321 1            127787643 345521  1101


Q ss_pred             H-----HHhCCc-----EEEEEeCCC--CCc-------ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----H
Q 021539          187 F-----AAQKES-----KVIAAPETW--LDL-------RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----M  241 (311)
Q Consensus       187 l-----a~~~G~-----~V~~vp~~~--~~g-------~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i  241 (311)
                      +     ..+.++     .+..+|.+.  .+.       .+++++|++.++...  ..+++|.+..+  .+|.+.|    +
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l  254 (449)
T 2cjg_A          177 LTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP--HDIACFVAEPIQGEGGDRHFRPEFF  254 (449)
T ss_dssp             TCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST--TTEEEEEECSEETTTTCEECCHHHH
T ss_pred             hcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC--CceEEEEEeCcCCCCCCccCCHHHH
Confidence            0     011233     566677643  111       245667888886311  12677777544  5898888    8


Q ss_pred             HHHHH-HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          242 HWISE-AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       242 ~~I~~-a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      ++|.+ |+++|+++++|.+|+ + |...    ++.....+|++++|  | .+  |  +|++++++++.+.
T Consensus       255 ~~l~~l~~~~g~lli~DEv~~g~-g~~g~~~~~~~~~~~~di~t~s--K-~l--~--iG~~~~~~~~~~~  316 (449)
T 2cjg_A          255 AAMRELCDEFDALLIFDEVQTGC-GLTGTAWAYQQLDVAPDIVAFG--K-KT--Q--VCGVMAGRRVDEV  316 (449)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTT-TTTSSSSTHHHHTCCCSEEEEC--G-GG--S--SEEEEECGGGGGS
T ss_pred             HHHHHHHHHCCcEEEEeccccCC-CccCcceeecccCCCceEEEec--C-cc--c--EEEEEECHHHhhh
Confidence            88866 699999999999999 5 6432    12223468999888  9 55  5  8999999877653

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=98.57  E-value=3.5e-11  Score=113.63  Aligned_cols=166  Identities=11%  Similarity=0.078  Sum_probs=109.1

Q ss_pred             HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          128 EIQARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       128 le~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      ..+.|+.+++++    |  ++++  .|+||+|+|+|+++++.++ ..+|+.|+.. ..|+.  ....++..|.++..+|.
T Consensus        68 ~~~l~~~la~~l~~~~g~~~~~~--~v~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~  142 (392)
T 3b1d_A           68 SDELLQAVLDWEKSEHQYSFDKE--DIVFVEGVVPAISIAIQAF-TKEGEAVLINSPVYPP--FARSVRLNNRKLVSNSL  142 (392)
Confidence            446777777765    4  4444  4999999999999999887 4678887633 33332  12233445888888887


Q ss_pred             CCCCc--ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc---HHHHHH-HHHCCcEEEecccccCccC----ccc
Q 021539          201 TWLDL--RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS---MHWISE-AHRNAWHVLLDATGLVFGE----DQL  268 (311)
Q Consensus       201 ~~~~g--~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P---i~~I~~-a~~~g~~vlvDAaQsv~G~----~pl  268 (311)
                      +..++  .++.++|++.+++.    ++++|.++..  .+|.++|   +++|.+ |+++|+++++|.+++. ..    ...
T Consensus       143 ~~~~g~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~  217 (392)
T 3b1d_A          143 KEENGLFQIDFEQLENDIVEN----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQD-LTLFGHEHV  217 (392)
Confidence            53232  37888898888621    1345544422  5899998   556644 6889999999999986 32    122


Q ss_pred             CCCC-----CCCcEEEEccccCcCCCC-CceEEEEEeCC-CCc
Q 021539          269 ALAL-----HRPDLVLCTLDNNTHAQP-LKITCLLVRRK-SFD  304 (311)
Q Consensus       269 dl~~-----l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~-~~~  304 (311)
                      ++..     .+.++++.|++| .||.| ..+|+++.+++ +.+
T Consensus       218 ~~~~~~~~~~~~~i~~~s~sK-~~~~~G~r~G~~~~~~~~~~~  259 (392)
T 3b1d_A          218 SFNTVSPDFKDFALVLSSATK-TFNIAGTKNSYAIIENPTLCA  259 (392)
Confidence            3321     345689999999 77623 13798888654 443

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.00  E-value=1.1e-09  Score=104.83  Aligned_cols=171  Identities=13%  Similarity=0.035  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEE-ccCcCh--HHHHHHHH---hC-----Cc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLT-IISEES--DYIKGFAA---QK-----ES  193 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils-~~eh~~--~~~~~la~---~~-----G~  193 (311)
                      ...++.++.++++++++++  .|+||+|+|||++.++.... +..++.|++ ...+|.  .....+..   ..     ..
T Consensus        85 ~~~~~l~~~la~~~~~~~~--~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~  162 (433)
T 1zod_A           85 RPVVDLATRLANITPPGLD--RALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAV  162 (433)
T ss_dssp             HHHHHHHHHHHHHSCTTCC--EEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCT
T ss_pred             HHHHHHHHHHHHhCCCCcC--EEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCC
Confidence            3456788889999998654  49999999999998876431 123466653 333441  11111100   00     11


Q ss_pred             EEEEEeCCC----C-------CcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEE
Q 021539          194 KVIAAPETW----L-------DLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVL  255 (311)
Q Consensus       194 ~V~~vp~~~----~-------~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vl  255 (311)
                      .+..+++..    +       .+.++.++|++.+++.. ...+++|.+..+  .+|.+.|    +++|.+ |+++|++++
T Consensus       163 ~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li  241 (433)
T 1zod_A          163 GSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS-SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLI  241 (433)
T ss_dssp             TEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC-CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEE
T ss_pred             CceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC-CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEE
Confidence            344555421    0       11246888998887420 012566666433  5898888    899866 699999999


Q ss_pred             eccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          256 LDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       256 vDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|.+|+ + |...    ++.....+|++++|  | .+|+..++|++++++++.
T Consensus       242 ~DEv~~~~-g~~g~~~~~~~~~~~~di~s~s--K-~~~~G~~ig~~~~~~~~~  290 (433)
T 1zod_A          242 LDEAQTGV-GRTGTMFACQRDGVTPDILTLS--K-TLGAGLPLAAIVTSAAIE  290 (433)
T ss_dssp             EECTTTTT-TTTSSSSTHHHHTCCCSEEEEC--H-HHHTTSSCEEEEECHHHH
T ss_pred             EeccccCC-CcCchHhHHhhcCCCCCEEEec--c-cccCCCCeeEEEEhHHHH
Confidence            999999 6 6432    12223568998887  9 666344589999987653

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=98.94  E-value=2.6e-09  Score=102.43  Aligned_cols=176  Identities=9%  Similarity=-0.007  Sum_probs=105.6

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEE-EccCcChH--HHHHHHHhCC--c--
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYL-TIISEESD--YIKGFAAQKE--S--  193 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Il-s~~eh~~~--~~~~la~~~G--~--  193 (311)
                      .......++.++.++++++...+ ..|+||+|+|+|++.++.... +.+++.|+ ....+|..  ....+.....  .  
T Consensus        82 ~~~~~~~~~l~~~la~~~~~~~~-~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~  160 (439)
T 3dxv_A           82 SASNAPAVTLAERLLASFPGEGT-HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAA  160 (439)
T ss_dssp             SSEEHHHHHHHHHHHHTTTCTTT-EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC----------
T ss_pred             ccCCHHHHHHHHHHHHhCCCCCC-CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhcc
Confidence            33455667899999999976542 259999999999998877521 12345554 33334411  1111110000  0  


Q ss_pred             -------EEEEEeCCCCCccc-----CHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEE
Q 021539          194 -------KVIAAPETWLDLRI-----KGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHV  254 (311)
Q Consensus       194 -------~V~~vp~~~~~g~i-----d~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~v  254 (311)
                             .+..+|.+. +...     +.++|+++++... ...+++|.+...  .+|.+.|    +++|.+ |+++|+++
T Consensus       161 ~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l~~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~l  238 (439)
T 3dxv_A          161 KADGLILLPYPDPYRP-YRNDPTGDAILTLLTEKLAAVP-AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILV  238 (439)
T ss_dssp             ---CEEEECCCCSSSC-BTTBTTSHHHHHHHHHHHHTSC-TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEE
T ss_pred             ccCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence                   122344332 1111     5788999884111 112556655433  5899999    999966 69999999


Q ss_pred             Eeccccc-CccC----cccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          255 LLDATGL-VFGE----DQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       255 lvDAaQs-v~G~----~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      ++|.+|+ + |.    ..++.....+|+++||  | .+|+-..+|+++.++++.+
T Consensus       239 i~DE~~~g~-g~~g~~~~~~~~~~~~di~s~s--K-~~~~G~riG~~~~~~~~~~  289 (439)
T 3dxv_A          239 VCDEVKVGL-ARSGRLHCFEHEGFVPDILVLG--K-GLGGGLPLSAVIAPAEILD  289 (439)
T ss_dssp             EEECTTTCT-TTTSSSSGGGGTTCCCSEEEEC--G-GGGTTSCCEEEEEEHHHHT
T ss_pred             EEeccccCC-CcCchhhHHHhcCCCCCEEEEc--c-hhcCCcceEEEEECHHHHh
Confidence            9999996 3 32    2234434568998666  9 6662124799999876544

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=98.93  E-value=2.6e-08  Score=94.43  Aligned_cols=163  Identities=10%  Similarity=0.034  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHc-CCC-----CCCCeEEE--eCCHHHHHHHHH---hcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEE
Q 021539          129 IQARNRALKHC-GLS-----EDEYLVLF--VPNYKEAMLMIG---ESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       129 e~aR~~IA~~L-ga~-----~dey~VvF--TsnaTealnlv~---~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~  196 (311)
                      .+.|+.+++++ |..     +++  |.|  |.++|+|++++.   ..+ ..+||.|+.. ..|. . ....++..|.++.
T Consensus        82 ~~lr~~ia~~~~~~~~~~~~~~~--i~~~~~~~g~ga~~~~~~~~~~~-~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~  156 (409)
T 4eu1_A           82 ASFVEEAQKLCFGPTCAALRDGR--IASCQTLGGTGALRIGGDLLNRF-VANCNRIYGPDVGYP-N-HESIFAKAGMELT  156 (409)
T ss_dssp             HHHHHHHHHHHHCSSCHHHHTTC--EEEEEESHHHHHHHHHHHHGGGT-SSSCCEEEEESSCCT-H-HHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHcCCCchhhccCc--eeeeecccchHHHHHHHHHHHHh-cCCCCEEEEeCCCcH-h-HHHHHHHcCCeEE
Confidence            47899999976 654     343  754  999999998753   333 3578988643 3343 2 2233455799999


Q ss_pred             EEeCC-CCCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHH---HHH-HHHCCcEEEecccccCccCcc--
Q 021539          197 AAPET-WLDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGEDQ--  267 (311)
Q Consensus       197 ~vp~~-~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~p--  267 (311)
                      .+|.+ ..+..+|.++|++.+++..+  .+.++.+  +++-||.++|.++   |.+ |+++|+++++|.+++-.+..+  
T Consensus       157 ~~~~~~~~~~~~d~~~l~~~l~~~~~--~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~  234 (409)
T 4eu1_A          157 PYSYYDPATKGLNLAGMLECLDKAPE--GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLD  234 (409)
T ss_dssp             EECCEETTTTEECHHHHHHHHHHSCT--TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHH
T ss_pred             EEEeecCcCCcCcHHHHHHHHHhCCC--CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcc
Confidence            99873 22567899999999974211  2455553  3446999999776   544 689999999999966313222  


Q ss_pred             -----c-CC-CCCCCcEEEEccccCcCCCCCc--eEEE--EEeC
Q 021539          268 -----L-AL-ALHRPDLVLCTLDNNTHAQPLK--ITCL--LVRR  300 (311)
Q Consensus       268 -----l-dl-~~l~~Dfl~~S~HK~l~G~P~G--iG~L--~vr~  300 (311)
                           + .+ ....-.+++.|+.| .|| ..|  +|++  ++.+
T Consensus       235 ~~~~~~~~~~~~~~~~i~~~S~SK-~~g-~~G~riG~~~~v~~~  276 (409)
T 4eu1_A          235 YDAFVPRHLVDMVPNLIVAQSFSK-NFG-LYGHRCGALHISTAS  276 (409)
T ss_dssp             HHTHHHHHHHTTSSCCEEEEECTT-TSS-CGGGCCEEEEEECSS
T ss_pred             cchHHHHHHHhhCCcEEEEecCcc-ccc-CccCCceEEEEEeCC
Confidence                 1 11 11223467778889 888 447  6876  5443

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=98.90  E-value=1.6e-09  Score=103.56  Aligned_cols=162  Identities=11%  Similarity=0.022  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEE-ccCcChH----------HHHHH--
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLT-IISEESD----------YIKGF--  187 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils-~~eh~~~----------~~~~l--  187 (311)
                      .....++.++.++++++ +++  .|+||+|+|||++.++.   .+.  .++.|++ ...+|..          .....  
T Consensus        90 ~~~~~~~la~~l~~~~~-~~~--~v~~~~ggsea~~~al~~a~~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~  164 (427)
T 3fq8_A           90 PCALENVLAEMVNDAVP-SIE--MVRFVNSGTEACMAVLRIMRAYT--GRDKIIKFEGCYHGHADMFLVKAGSGVATLGL  164 (427)
T ss_dssp             CCHHHHHHHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHH--CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhh--CCCEEEEECCCcCCCCHHHHHhcCCcccccCC
Confidence            34455678888999997 444  49999999999998773   332  3356653 3333310          00000  


Q ss_pred             HHhCCc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec-c-cccchhc----HHHHHH-HHHCCcEE
Q 021539          188 AAQKES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGTRYS----MHWISE-AHRNAWHV  254 (311)
Q Consensus       188 a~~~G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~i~P----i~~I~~-a~~~g~~v  254 (311)
                      ....|+      .+..+|.+      |.++|++++++..  ..+++|.+.. + .+|.+.|    +++|.+ |+++|+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~l  236 (427)
T 3fq8_A          165 PSSPGVPKKTTANTLTTPYN------DLEAVKALFAENP--GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALL  236 (427)
T ss_dssp             CSCSSSCHHHHTTEEEEETT------CHHHHHHHHHHST--TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEE
T ss_pred             CCCCCCCCcccCceeecCCC------CHHHHHHHHHhCC--CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence            000011      23344432      6789999987631  1256666543 3 5899999    999966 69999999


Q ss_pred             Eeccccc---CccC-cccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          255 LLDATGL---VFGE-DQLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       255 lvDAaQs---v~G~-~pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      ++|.+|+   . |. ...+.....+|++++|  | .+| + |  +|+++.++++.+
T Consensus       237 i~DEv~~g~~~-g~~~~~~~~~~~~di~t~s--K-~~~-~-G~~~G~~~~~~~~~~  286 (427)
T 3fq8_A          237 VFDEVITGFRI-AYGGVQEKFGVTPDLTTLG--K-IIG-G-GLPVGAYGGKREIMQ  286 (427)
T ss_dssp             EEECTTTBTTT-BTTHHHHHTTCCCSEEEEC--G-GGG-T-TSSCEEEEECHHHHT
T ss_pred             EEecccccccc-CcchhhHhcCCCCChhhhh--h-hhh-C-CcceEEEEEcHHHHH
Confidence            9999998   2 32 1122333568999888  9 676 3 5  999998876544

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=98.89  E-value=6.1e-09  Score=99.59  Aligned_cols=169  Identities=14%  Similarity=-0.011  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCCCEEEE-ccCcChHH--HHHHHHhCC--
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKGNYYLT-IISEESDY--IKGFAAQKE--  192 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~Gd~Ils-~~eh~~~~--~~~la~~~G--  192 (311)
                      ....++.++.++++++++.+  .|+||+|+|||++.++..+..       ..++.|++ ...+|...  ...+.....  
T Consensus        71 ~~~~~~l~~~la~~~~~~~~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~  148 (430)
T 3i4j_A           71 SDVLEEYAGRLARFVGLPTF--RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARR  148 (430)
T ss_dssp             EHHHHHHHHHHHHHTTCTTC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC------------------
T ss_pred             CHHHHHHHHHHHHhCCCCCC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccc
Confidence            34456788889999998765  499999999999987765411       23566653 33344211  111110000  


Q ss_pred             -------c--EEEEEeCCCC--CcccCHHHHHhhhhccCCCCCceEEEEe-cc--cccchhc----HHHHHH-HHHCCcE
Q 021539          193 -------S--KVIAAPETWL--DLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV--VNGTRYS----MHWISE-AHRNAWH  253 (311)
Q Consensus       193 -------~--~V~~vp~~~~--~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~--~tG~i~P----i~~I~~-a~~~g~~  253 (311)
                             .  .+..+|.+..  .+..+.++|++.+++.. ...+.+|.+. .+  .+|.+.|    +++|.+ |+++|++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~  227 (430)
T 3i4j_A          149 ELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG-PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGII  227 (430)
T ss_dssp             -------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC-GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCE
T ss_pred             cccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC-CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCE
Confidence                   0  2334444321  13346688888887410 0124566654 33  5688888    888866 6999999


Q ss_pred             EEeccccc-CccCcc----cCCC-CCCCcEEEEccccCcCCCCCc---eEEEEEeCCC
Q 021539          254 VLLDATGL-VFGEDQ----LALA-LHRPDLVLCTLDNNTHAQPLK---ITCLLVRRKS  302 (311)
Q Consensus       254 vlvDAaQs-v~G~~p----ldl~-~l~~Dfl~~S~HK~l~G~P~G---iG~L~vr~~~  302 (311)
                      +++|-+|+ + |...    ++.. ...+|+++||  | .+| + |   +|+++.++++
T Consensus       228 li~DEv~~~~-~~~g~~~~~~~~~~~~~di~t~s--K-~l~-~-G~~r~G~~~~~~~i  279 (430)
T 3i4j_A          228 FIADEVMSGM-GRCGSPLALSRWSGVTPDIAVLG--K-GLA-A-GYAPLAGLLAAPQV  279 (430)
T ss_dssp             EEEECTTTTT-TTTSSSSGGGGTTTCCCSEEEEC--G-GGT-T-TSSCCEEEEECHHH
T ss_pred             EEEechhhCC-CcccchhhhhhhcCCCCcEEEEc--c-ccc-C-CccccEEEEECHHH
Confidence            99999998 4 4332    1222 3458999988  9 677 3 5   7999987754

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=98.86  E-value=3.1e-09  Score=101.74  Aligned_cols=164  Identities=15%  Similarity=0.063  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEE-ccCcChHHHHHHHHhCCc----------
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLT-IISEESDYIKGFAAQKES----------  193 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils-~~eh~~~~~~~la~~~G~----------  193 (311)
                      ....+.+++++++++ .++  .|+||+|+|||++.++.... ..+++.|++ ...+|......+ ...|.          
T Consensus        95 ~~~~~l~~~la~~~~-~~~--~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-~~~g~~~~~~~~~~~  170 (434)
T 3l44_A           95 ALEVKFAKMLKEAMP-ALD--KVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVL-VAAGSGPSTLGTPDS  170 (434)
T ss_dssp             HHHHHHHHHHHHHCT-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGG-BC-------CCCBSS
T ss_pred             HHHHHHHHHHHHhCC-CCC--EEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHH-hhcCCcccccCCCCc
Confidence            344577888999987 444  49999999999998776431 124567764 333331100000 00011          


Q ss_pred             ---------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          194 ---------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       194 ---------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                               .+..+|.+      |.++|++++++..  ..+.+|.+. .+ .+|.+.|    +++|.+ |+++|+++++|
T Consensus       171 ~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~D  242 (434)
T 3l44_A          171 AGVPQSIAQEVITVPFN------NVETLKEALDKWG--HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYD  242 (434)
T ss_dssp             TTCCHHHHTTEEEECTT------CHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEE
T ss_pred             CCCCCcCCCceEecCcc------cHHHHHHHHHhCC--CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence                     22333322      6788988887421  024566654 34 6889998    999966 69999999999


Q ss_pred             ccccC--ccCcc-cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          258 ATGLV--FGEDQ-LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv--~G~~p-ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .+|.-  +|... ++.....+|++++|  | .+|++..+|+++.++++.+
T Consensus       243 Ev~~g~~~g~~~~~~~~~~~~di~t~s--K-~~~~G~~iG~~~~~~~i~~  289 (434)
T 3l44_A          243 EVITAFRFMYGGAQDLLGVTPDLTALG--K-VIGGGLPIGAYGGKKEIME  289 (434)
T ss_dssp             CTTTTTTSSSSCHHHHHTCCCSEEEEE--G-GGGTTSSCEEEEECHHHHT
T ss_pred             ccccceeccccHHHHHcCCCCCeeehh--h-hhcCCcCeeeEEEcHHHHH
Confidence            99971  03211 22223468998887  8 5554567999998876644

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=98.86  E-value=1.5e-08  Score=101.93  Aligned_cols=148  Identities=16%  Similarity=0.058  Sum_probs=99.7

Q ss_pred             CeEEEeCCHHHHHHHHHhcC----CCCCCCEEEEc-cCcChHHHHH-HHHhCCcEEEEEeCCCCC-cccCHHHHHhhhhc
Q 021539          146 YLVLFVPNYKEAMLMIGESY----PFFKGNYYLTI-ISEESDYIKG-FAAQKESKVIAAPETWLD-LRIKGSQLSQNFRR  218 (311)
Q Consensus       146 y~VvFTsnaTealnlv~~s~----~~~~Gd~Ils~-~eh~~~~~~~-la~~~G~~V~~vp~~~~~-g~id~~~L~~~l~~  218 (311)
                      .+|++|+|+|+++++++..+    -..+||.|+.. ..++. .... .....|.++..+|.+..+ ..+|.++|++.++.
T Consensus       166 ~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~  244 (546)
T 2zy4_A          166 VNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTP-YIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP  244 (546)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHH-HHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST
T ss_pred             ceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCcc-HHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC
Confidence            36999999999999988763    14688988633 33332 2111 112347888889876422 24789999887754


Q ss_pred             cCCCCCceEEEEe--cccccchhcHHHH---HH-H--HHCCcEEEecccccCccCcccCCCCC--CCcEEEEccccCcCC
Q 021539          219 KCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-A--HRNAWHVLLDATGLVFGEDQLALALH--RPDLVLCTLDNNTHA  288 (311)
Q Consensus       219 ~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a--~~~g~~vlvDAaQsv~G~~pldl~~l--~~Dfl~~S~HK~l~G  288 (311)
                      +     +++|.+.  ++-||.++|.+++   .+ |  +++|+++++|.+++-....+.++...  +.++++.|+.| .+|
T Consensus       245 ~-----~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK-~~g  318 (546)
T 2zy4_A          245 A-----IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSK-YFG  318 (546)
T ss_dssp             T-----EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTT-TTT
T ss_pred             C-----CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCcc-ccC
Confidence            3     4555543  2359999997765   23 4  67899999999998512222222221  46799999999 888


Q ss_pred             CCCc--eEEEEEeCC
Q 021539          289 QPLK--ITCLLVRRK  301 (311)
Q Consensus       289 ~P~G--iG~L~vr~~  301 (311)
                       ..|  +|+++++++
T Consensus       319 -~~GlRiG~~~~~~~  332 (546)
T 2zy4_A          319 -ATGWRLGVVAAHQQ  332 (546)
T ss_dssp             -CGGGCEEEEEEESS
T ss_pred             -CCCcceEEEEECCH
Confidence             458  799999875

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=98.86  E-value=2.9e-08  Score=95.79  Aligned_cols=174  Identities=11%  Similarity=0.074  Sum_probs=105.4

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C---C---CCCEEEEc-cCcChH--HHHHHH----
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F---F---KGNYYLTI-ISEESD--YIKGFA----  188 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~---~---~Gd~Ils~-~eh~~~--~~~~la----  188 (311)
                      ......++.++.++++++.+. +  |+||+|+|||++.++.... +   .   +++.|++. ..+|..  ....+.    
T Consensus        88 ~~~~~~~~la~~l~~~~~~~~-~--v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~  164 (452)
T 3n5m_A           88 QSHEPAIKLAEKLNEWLGGEY-V--IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQ  164 (452)
T ss_dssp             SEEHHHHHHHHHHHHHHTSCE-E--EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGG
T ss_pred             cCCHHHHHHHHHHHHhCCCCc-e--EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchh
Confidence            344556788899999998753 2  9999999999998776542 0   2   45677633 333311  111110    


Q ss_pred             HhC-----CcEEEEEeCCCC-C----------cccCHHHHHhhhhccCCCCCceEEEE-e--cccccchhc----HHHHH
Q 021539          189 AQK-----ESKVIAAPETWL-D----------LRIKGSQLSQNFRRKCKYTPKGLFSY-P--VVVNGTRYS----MHWIS  245 (311)
Q Consensus       189 ~~~-----G~~V~~vp~~~~-~----------g~id~~~L~~~l~~~~~~~~t~LVs~-~--~~~tG~i~P----i~~I~  245 (311)
                      .+.     ...+..++.... .          +..+.++|++.++.... ..+++|.+ +  ++ +|.+.|    +++|.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~  242 (452)
T 3n5m_A          165 RRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELS-ETIAAFIMEPIITG-GGILMAPQDYMKAVH  242 (452)
T ss_dssp             GTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCG-GGEEEEEECSSBTT-TTCBCCCTTHHHHHH
T ss_pred             hccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCC-CCEEEEEEccccCC-CCeeeCCHHHHHHHH
Confidence            000     112444543110 0          01117889888871100 12455555 3  35 899998    88886


Q ss_pred             H-HHHCCcEEEeccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          246 E-AHRNAWHVLLDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       246 ~-a~~~g~~vlvDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      + |+++|+++++|-+|+ + |..    .++.....+|+++||  |++.+++..+|+++.++++.+
T Consensus       243 ~l~~~~~~llI~DEv~~g~-g~~g~~~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~i~~  304 (452)
T 3n5m_A          243 ETCQKHGALLISDEVICGF-GRTGKAFGFMNYDVKPDIITMA--KGITSAYLPLSATAVKREIYE  304 (452)
T ss_dssp             HHHHHHTCEEEEECTTTTT-TTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHG
T ss_pred             HHHHHcCCEEEEecchhCC-CcccccchhhhcCCCCCEEeec--ccccCCCcceEEEEECHHHHH
Confidence            6 699999999999998 4 432    233334568999887  844332256899999876644

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=98.86  E-value=1.3e-09  Score=104.04  Aligned_cols=148  Identities=9%  Similarity=-0.043  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHcCC-----CCCCCeEEEeCCHHHHHHHHHhcCCCCCCC----EEEE-ccCcChHHHHHHHHhCCcEEEEE
Q 021539          129 IQARNRALKHCGL-----SEDEYLVLFVPNYKEAMLMIGESYPFFKGN----YYLT-IISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~Lga-----~~dey~VvFTsnaTealnlv~~s~~~~~Gd----~Ils-~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      .+.|+.||++++.     +++ .+|++|+|+|+++++++.++ ..+||    .|+. ...|. . ....++..|+++..+
T Consensus        71 ~~lr~aia~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~l-~~~Gd~~~~~Vlv~~P~y~-~-~~~~~~~~g~~~~~~  146 (391)
T 3bwn_A           71 PELEDAIKDLHGVVGNAATED-RYIVVGTGSTQLCQAAVHAL-SSLARSQPVSVVAAAPFYS-T-YVEETTYVRSGMYKW  146 (391)
T ss_dssp             HHHHHHHHHHHHHHCSBCCSS-SEEEEEEHHHHHHHHHHHHH-HHTSSSSSEEEEECSSCCT-H-HHHHHHTTCBTTEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCC-CeEEEeCChHHHHHHHHHHh-cCCCCCCcceEEEcCCCch-h-HHHHHHHcCCeEEEe
Confidence            4789999999883     332 25999999999999999887 35788    8763 33444 2 334455678888888


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccCccC-cccCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-DQLALALHR  274 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-~pldl~~l~  274 (311)
                      +.+. ++ +.        .++     +++|.++  ++-||.+++  +|.+ .+++++++++|.+++. ++ .++.. ..+
T Consensus       147 ~~d~-~~-l~--------~~~-----~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~-~~~~~l~~-~~~  207 (391)
T 3bwn_A          147 EGDA-WG-FD--------KKG-----PYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYW-PHYTPITR-RQD  207 (391)
T ss_dssp             EEES-TT-CC--------CCS-----CEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCS-TTTSCCCC-CBC
T ss_pred             cCCH-HH-cC--------CCC-----CEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCC-CCCCcccc-CCC
Confidence            8764 22 11        122     4566543  336999987  5533 2444599999999987 54 34443 356


Q ss_pred             CcEEEEccccCcCCCCCce--EEEEE-eCC
Q 021539          275 PDLVLCTLDNNTHAQPLKI--TCLLV-RRK  301 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~Gi--G~L~v-r~~  301 (311)
                      .++++.|++| .|| +.|+  |++++ +++
T Consensus       208 ~~i~~~S~SK-~~g-~~GlRiG~~~~~~~~  235 (391)
T 3bwn_A          208 HDIMLFTFSK-ITG-HAGSRIGWALVKDKE  235 (391)
T ss_dssp             CSEEEEEHHH-HHS-CGGGCEEEEEECCHH
T ss_pred             CeEEEEechh-hcC-CCccceEEEEecCHH
Confidence            7999999999 998 6685  99998 444

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=98.84  E-value=2.6e-08  Score=95.38  Aligned_cols=165  Identities=10%  Similarity=-0.027  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEE-EccCcChHHHHHHHH-hCC----------
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYL-TIISEESDYIKGFAA-QKE----------  192 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Il-s~~eh~~~~~~~la~-~~G----------  192 (311)
                      ....+.+++++++++ .++  .|+||+|+|||++.++.... +..++.|+ ....+|......+.. ..+          
T Consensus        93 ~~~~~la~~l~~~~~-~~~--~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~  169 (429)
T 4e77_A           93 EMEVKMAQLVTDLVP-TMD--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP  169 (429)
T ss_dssp             HHHHHHHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred             HHHHHHHHHHHhhCC-CCC--EEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence            445678889999987 344  49999999999998776321 12345665 333444221111100 001          


Q ss_pred             -c------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecc
Q 021539          193 -S------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       193 -~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDA  258 (311)
                       +      .+..+|.+      |.++|++++++..  ..+.+|.+..+  ..|.+.|    +++|.+ |+++|+++++|.
T Consensus       170 ~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DE  241 (429)
T 4e77_A          170 GVPTDFAKHTLTCTYN------DLASVRQAFEQYP--QEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDE  241 (429)
T ss_dssp             TSCGGGGTTEEEECTT------CHHHHHHHHHHST--TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCccCCceeecCCC------CHHHHHHHHHhcC--CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence             1      11222221      6788999887521  12566666433  5789999    999966 699999999999


Q ss_pred             ccc---CccCcc-cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          259 TGL---VFGEDQ-LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       259 aQs---v~G~~p-ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +|+   . |... ++.....+|++++|  | .+|+...+|+++.++++.+.
T Consensus       242 v~~g~r~-g~~~~~~~~~~~pdi~t~s--K-~~~~G~~~G~~~~~~~~~~~  288 (429)
T 4e77_A          242 VMTGFRV-ALAGAQDYYHVIPDLTCLG--K-IIGGGMPVGAFGGRREVMNA  288 (429)
T ss_dssp             TTTBTTT-BTTCHHHHTTCCCSEEEEE--G-GGGTTSCCEEEEECHHHHTT
T ss_pred             cccCccc-CcchHHHhcCCCCCeeeec--c-cccCCCCeEEEEECHHHHHH
Confidence            998   4 4311 22223467998777  9 55534468999988765443

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=98.82  E-value=2.7e-08  Score=96.02  Aligned_cols=164  Identities=15%  Similarity=0.012  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCCCCCCEEE-EccCcChH--HHHHHH-------HhC
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPFFKGNYYL-TIISEESD--YIKGFA-------AQK  191 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~~~Gd~Il-s~~eh~~~--~~~~la-------~~~  191 (311)
                      ....++..+.+++.++ .++  .|+||+|+|||+.+++..   +.  .++.|+ ....+|..  .+..+.       ...
T Consensus        96 ~~~~~~la~~l~~~~~-~~~--~v~~~~gg~eA~~~al~~ar~~~--~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~  170 (453)
T 2cy8_A           96 HPLEVRWAERIVAAFP-SIR--KLRFTGSGTETTLLALRVARAFT--GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAP  170 (453)
T ss_dssp             CHHHHHHHHHHHHHCT-TCS--EEEEESCHHHHHHHHHHHHHHHH--CCCEEEEECC-----------------------
T ss_pred             CHHHHHHHHHHHhhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhh--CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCC
Confidence            4445566677777765 333  599999999999988776   42  335554 33344411  111100       001


Q ss_pred             Cc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecc
Q 021539          192 ES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       192 G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDA  258 (311)
                      |+      .+..+|.      .|.++|++.+++..  ..+++|.+..+  .+|.+.|    +++|.+ |+++|+++++|.
T Consensus       171 g~~~~~~~~~~~~~~------~d~~~le~~l~~~~--~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DE  242 (453)
T 2cy8_A          171 GVLPETTANTLLIRP------DDIEGMREVFANHG--SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDE  242 (453)
T ss_dssp             -----CGGGEEEECT------TCHHHHHHHHHHHG--GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCccccCceeecCC------CCHHHHHHHHHhcC--CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence            33      1333332      26788988887410  01466666433  4899988    888866 699999999999


Q ss_pred             cccCccCcc---cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQ---LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~p---ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|+-....+   ++.....+|++++|  | .+|+...+|+++.++++.+
T Consensus       243 v~~g~~~g~~~~~~~~~~~~di~s~s--K-~l~~G~~~G~v~~~~~~~~  288 (453)
T 2cy8_A          243 VISGFRVGNHGMQALLDVQPDLTCLA--K-ASAGGLPGGILGGREDVMG  288 (453)
T ss_dssp             TTTTTTTCTTHHHHHHTCCCSEEEEE--G-GGGTTSSCEEEEECHHHHT
T ss_pred             CccccccCchhhhHHhCCCCcEEEEC--h-hhhCCcceEEEechHHHHH
Confidence            997211111   11112458988665  9 5653346899999876544

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=98.81  E-value=2.2e-08  Score=99.59  Aligned_cols=165  Identities=15%  Similarity=0.058  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEc-c---CcChHHH----HHH-HHhCCcEEE
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTI-I---SEESDYI----KGF-AAQKESKVI  196 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~-~---eh~~~~~----~~l-a~~~G~~V~  196 (311)
                      .+.-|+++..++||++..++.|=. --+++.|+..+..++ .++||.|++. +   +|-+...    ... ...+-+++.
T Consensus       101 iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~Al-l~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~  179 (490)
T 3ou5_A          101 IELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESM  179 (490)
T ss_dssp             HHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-CC-CCCEECBC----------------------------
T ss_pred             HHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHH-cCCCCEEEecccCCCCcccccccCCCccccccccccccc
Confidence            334799999999999765432211 237788888887777 5899999632 1   2222111    000 111122333


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc-----ccCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED-----QLAL  270 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~-----pldl  270 (311)
                      .-+++..++.||.+++++..++.    +.+|+.+.+...-...|++++++ |++.|+++++|++|.. |.+     |=.+
T Consensus       180 ~Y~vd~~t~~IDyd~~~~~A~~~----kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHia-GLVA~g~~psP~  254 (490)
T 3ou5_A          180 PYKLNPKTGLIDYNQLALTARLF----RPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHIS-GLVAAKVIPSPF  254 (490)
T ss_dssp             CBCEETTTTEECHHHHHHHHHHH----CCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGH-HHHHTTSSCCGG
T ss_pred             ccccCCCCCcccHHHHHHHHhhc----CCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhh-hhhcccccCCcc
Confidence            34556557899999998877753    24677766555677889999987 5899999999999986 644     3334


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      .  .+|+++.|-||++.| |.| |+++.|++
T Consensus       255 ~--~ADvVTtTTHKTLrG-PrG-G~Il~~~~  281 (490)
T 3ou5_A          255 K--HADIVTTTTHKTLRG-ARS-GLIFYRKG  281 (490)
T ss_dssp             G--TCSEEEEESSSTTCS-CSC-EEEEEECS
T ss_pred             c--cceEEeccccccccC-CCc-eEEEeccc
Confidence            3  389999999996667 974 55555553

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=98.81  E-value=3.2e-08  Score=97.93  Aligned_cols=164  Identities=8%  Similarity=-0.052  Sum_probs=106.2

Q ss_pred             HHHHHHHHHHc-----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCC----CEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          129 IQARNRALKHC-----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKG----NYYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       129 e~aR~~IA~~L-----ga~~dey~VvFTsnaTealnlv~~s~~~~~G----d~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      .+.|+.||+++     |.+.+..+|++|+|+|+|+++++..+. .+|    +.|+ ....|..  +...++..|.++..+
T Consensus       132 ~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-~~gd~~~d~Vlv~~p~y~~--~~~~~~~~g~~~v~~  208 (498)
T 3ihj_A          132 NCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-SGGGKSRTGVMIPIPQYPL--YSAVISELDAIQVNY  208 (498)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-CCCGGGSEEEEEEESCCTH--HHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-CCCCCCCCEEEEeCCCchh--HHHHHHHcCCEEEEe
Confidence            36777888776     453333459999999999999998874 455    3775 4445542  223344569999999


Q ss_pred             eCCCC-CcccCHHHHHhhhhccCCCCCceEEEEe-c-ccccchhcHHH---HHH-HHHCCcEEEecccccCccCc-----
Q 021539          199 PETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP-V-VVNGTRYSMHW---ISE-AHRNAWHVLLDATGLVFGED-----  266 (311)
Q Consensus       199 p~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~-~-~~tG~i~Pi~~---I~~-a~~~g~~vlvDAaQsv~G~~-----  266 (311)
                      +.+.. +..+|.++|++.+++.....++++|.+. . +-||.++|.++   |.+ |+++|+++++|.++.- ...     
T Consensus       209 ~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~-~~~~~~~~  287 (498)
T 3ihj_A          209 YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQD-NVYSPDCR  287 (498)
T ss_dssp             ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCC
T ss_pred             eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccc-cccCCCCC
Confidence            98742 2267999999999863111124566554 2 25999998765   433 5889999999999875 321     


Q ss_pred             ccCCCCC----------CCc-EEEEccccCcC-CCCCc--eEEEEE
Q 021539          267 QLALALH----------RPD-LVLCTLDNNTH-AQPLK--ITCLLV  298 (311)
Q Consensus       267 pldl~~l----------~~D-fl~~S~HK~l~-G~P~G--iG~L~v  298 (311)
                      ..++..+          ++. +++.|++| .| | ..|  +|++++
T Consensus       288 ~~s~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~G-~~G~R~G~~~~  331 (498)
T 3ihj_A          288 FHSFKKVLYEMGPEYSSNVELASFHSTSK-GYMG-ECGYRGGYMEV  331 (498)
T ss_dssp             CCCHHHHHHHTCHHHHTTCCEEEEEESSS-STTC-CSSSCCEEEEE
T ss_pred             cCCHHHHHHHhcccccCceeEEEEecccc-cccc-CcccceEEEEE
Confidence            1222211          122 56679999 66 5 334  677764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=98.79  E-value=9.9e-09  Score=100.44  Aligned_cols=175  Identities=12%  Similarity=0.093  Sum_probs=106.2

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC------CCC-CEEEE-ccCcChH--HHHHH----
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF------FKG-NYYLT-IISEESD--YIKGF----  187 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~------~~G-d~Ils-~~eh~~~--~~~~l----  187 (311)
                      .......++.+++++++++.+.+  .|+||+|+|||++.++.....      .+| +.|++ ...+|..  ....+    
T Consensus       114 ~~~~~~~~~L~e~la~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~  191 (457)
T 3tfu_A          114 GLTHEPAARLAKLLVDITPAGLD--TVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPH  191 (457)
T ss_dssp             SEECHHHHHHHHHHHHHSSTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC
T ss_pred             ccCCHHHHHHHHHHHHhCCCCcC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCc
Confidence            34455667899999999987655  499999999999987664311      133 35653 3333311  11000    


Q ss_pred             ------HHhCCcEEEEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEEec-c--cccchhc----HHHHHH-HHHCCc
Q 021539          188 ------AAQKESKVIAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYPV-V--VNGTRYS----MHWISE-AHRNAW  252 (311)
Q Consensus       188 ------a~~~G~~V~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~~-~--~tG~i~P----i~~I~~-a~~~g~  252 (311)
                            .......+..+|.... ....+.++|++++++..  ..+++|.+.. .  .+|.+.|    +++|.+ |+++|+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~--~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gi  269 (457)
T 3tfu_A          192 GGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA--GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEV  269 (457)
T ss_dssp             ----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG--GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTC
T ss_pred             ccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC--CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCC
Confidence                  0011123334443211 12246788988887321  1256666644 3  5898887    888866 699999


Q ss_pred             EEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          253 HVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       253 ~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      ++++|-+|. + |...    ++.....+|+++||  |++-|+-..+|+++.++++.
T Consensus       270 llI~DEv~~g~-gr~G~~~a~~~~~~~pdiit~s--K~l~gG~~~lG~v~~~~~i~  322 (457)
T 3tfu_A          270 LLIFDEIATGF-GRTGALFAADHAGVSPDIMCVG--KALTGGYLSLAATLCTADVA  322 (457)
T ss_dssp             EEEEECTTTTT-TTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHH
T ss_pred             EEEEEcCccCC-ccccchhHhHhcCCCceEEEEC--hhhhCCCcceEEEEEcHHHH
Confidence            999999998 4 5322    12223568999887  84444212589999887654

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=98.76  E-value=2.2e-08  Score=95.94  Aligned_cols=166  Identities=11%  Similarity=0.031  Sum_probs=101.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEE-EccCcCh--HHHHHHH----------Hh
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYL-TIISEES--DYIKGFA----------AQ  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Il-s~~eh~~--~~~~~la----------~~  190 (311)
                      ....++.++.++++++ .++  .|+||+|+|||+..++... .+.+++.|+ ....+|.  .....+.          ..
T Consensus        95 ~~~~~~l~~~la~~~~-~~~--~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~  171 (434)
T 2epj_A           95 GEAEVLLAEKILGYVK-RGG--MIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTS  171 (434)
T ss_dssp             CHHHHHHHHHHHHHHC-TTC--EEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESS
T ss_pred             CHHHHHHHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCC
Confidence            4455688999999995 333  4999999999999887751 012345654 3334442  1110000          01


Q ss_pred             CCc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          191 KES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       191 ~G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                      .|+      .+..+|.+      |.++|++.+++..  ..+++|.+..+  .+|.+.|    +++|.+ |+++|+++++|
T Consensus       172 ~g~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~D  243 (434)
T 2epj_A          172 AGVPEAVARLTLVTPYN------DVEALERVFAEYG--DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILD  243 (434)
T ss_dssp             TTCCHHHHTTEEEEETT------CHHHHHHHHHHHG--GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCcccCceEecCCC------CHHHHHHHHHhCC--CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence            132      24445532      6788988887420  02566666433  5899998    889866 69999999999


Q ss_pred             ccccCccCcc---cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          258 ATGLVFGEDQ---LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv~G~~p---ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      .+|+-....+   ++.....+|++++|  | .+|+.-.+|+++.++++.+
T Consensus       244 Ev~~g~~~g~~~~~~~~~~~~di~s~s--K-~l~~G~~~G~v~~~~~~~~  290 (434)
T 2epj_A          244 EVVTGFRLGLEGAQGYFNIEGDIIVLG--K-IIGGGFPVGAVAGSREVMS  290 (434)
T ss_dssp             ETTTTTTSSTTHHHHHHTCCCSEEEEE--G-GGGTTSSCEEEEECHHHHT
T ss_pred             cchhceeCCcchhhHHhCCCCCeeeec--c-hhcCCcceeeeeecHHHHH
Confidence            9998212211   11112468987665  9 6653224899999876544

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=98.68  E-value=1.8e-08  Score=96.63  Aligned_cols=164  Identities=13%  Similarity=0.022  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEE-ccCcChHHHHHHHHhCCc----------
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLT-IISEESDYIKGFAAQKES----------  193 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils-~~eh~~~~~~~la~~~G~----------  193 (311)
                      ....+.+++++++++ .++  .|+||+|+|||++.++.... ...++.|+. ...+|......+ ...|.          
T Consensus        93 ~~~~~l~~~la~~~~-~~~--~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-~~~g~~~~~~~~~~~  168 (429)
T 3k28_A           93 EIENKLAKLVIERVP-SIE--IVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLL-IKAGSGVATLGLPDS  168 (429)
T ss_dssp             HHHHHHHHHHHHHST-TCS--EEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGC-SSCCTTC-----CCC
T ss_pred             HHHHHHHHHHHHhCC-CCC--EEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHH-HhcCCcccccCCCCc
Confidence            344577888999986 334  59999999999998776431 123456653 223331100000 00111          


Q ss_pred             ---------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCCcEEEec
Q 021539          194 ---------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       194 ---------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g~~vlvD  257 (311)
                               .+..+|.+      |.++|++++++..  ..+.+|.+. .+ .+|.+.|    +++|.+ |+++|+++++|
T Consensus       169 ~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D  240 (429)
T 3k28_A          169 PGVPEGVAKNTITVAYN------DLESVKYAFEQFG--DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFD  240 (429)
T ss_dssp             TTCCHHHHTTEEEEETT------CHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCcccCceeecCCC------CHHHHHHHHHhCC--CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence                     22333332      6788988887421  124566654 33 5889999    999966 69999999999


Q ss_pred             ccccCc--cCc-ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          258 ATGLVF--GED-QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       258 AaQsv~--G~~-pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      -+|.-.  |.. ..+.....+|++++|  | .+|+...+|+++.++++.+
T Consensus       241 Ev~~g~~~g~~~~~~~~~~~~di~t~s--K-~~~~G~~iG~~~~~~~~~~  287 (429)
T 3k28_A          241 EVMTGFRVAYNCGQGYYGVTPDLTCLG--K-VIGGGLPVGAYGGKAEIMR  287 (429)
T ss_dssp             CTTTTTTSSTTHHHHHHTCCCSEEEEC--G-GGGTTSCCEEEEECHHHHT
T ss_pred             ccccccccCcchHHHHhCCCCceehhh--h-hhcCCCCeEEEEEcHHHHh
Confidence            999610  211 112223468999887  9 5554557999999876544

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=98.67  E-value=2.4e-08  Score=96.73  Aligned_cols=145  Identities=7%  Similarity=-0.053  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCC-------CCCCCEEEEcc-CcChHHHHHHHHhCCcE
Q 021539          129 IQARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYP-------FFKGNYYLTII-SEESDYIKGFAAQKESK  194 (311)
Q Consensus       129 e~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~-------~~~Gd~Ils~~-eh~~~~~~~la~~~G~~  194 (311)
                      .+.|+.||++++      ++++  +|++|+|+|+++++++.++.       +.+||.|+... .|. . ....++..|.+
T Consensus       103 ~~lr~aia~~~~~~~~~~~~~~--~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~-~-~~~~~~~~g~~  178 (427)
T 2hox_A          103 FELEKTIKELHEVVGNAAAKDR--YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYP-V-FREQTKYFDKK  178 (427)
T ss_dssp             HHHHHHHHHHHHHHTCBCCTTC--EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCH-H-HHHHHHHSCBT
T ss_pred             HHHHHHHHHHHHHhCCcCCCCC--EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcc-c-HHHHHHHcCCe
Confidence            478999999987      5544  59999999999999999883       67899886433 332 2 23334556776


Q ss_pred             EEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHHHHHCCcEEEecccccCccCcc-cCCC
Q 021539          195 VIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQ-LALA  271 (311)
Q Consensus       195 V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~p-ldl~  271 (311)
                      +...       .++.+.|++.++++     +++|.++  ++-||.+++ +.+   +  ++..+.|.+..- +..+ .++.
T Consensus       179 ~~~~-------~~d~~~l~~~~~~~-----~k~v~l~~p~NPtG~~~~-~~l---~--~~~~i~d~~~~~-~~~s~~~~~  239 (427)
T 2hox_A          179 GYVW-------AGNAANYVNVSNPE-----QYIEMVTSPNNPEGLLRH-AVI---K--GCKSIYDMVYYW-PHYTPIKYK  239 (427)
T ss_dssp             TEEE-------EEEGGGGTTCSCGG-----GEEEEEESSCTTTCCCCC-CSS---T--TCEEEEECTTCS-TTTSCCCSC
T ss_pred             eeee-------cCCHHHHHHhhcCC-----ceEEEEcCCCCCcccccH-HHH---c--CCCEEEeecccC-CCCCccccC
Confidence            5432       24566777777654     4565554  225999999 432   3  456777876543 2222 2332


Q ss_pred             CCCCcEEEEccccCcCCCCCc--eEEEEEe
Q 021539          272 LHRPDLVLCTLDNNTHAQPLK--ITCLLVR  299 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr  299 (311)
                       .+.|++++|++| .|| +.|  +|+++++
T Consensus       240 -~~~~i~~~S~SK-~~g-~~G~RiG~~~~~  266 (427)
T 2hox_A          240 -ADEDILLFTMSK-FTG-HSGSRFGWALIK  266 (427)
T ss_dssp             -BCCSEEEEEHHH-HTS-CGGGCCEEEEEC
T ss_pred             -CCceEEEEeChh-cCC-CCCceEEEEEEC
Confidence             568999999999 998 568  8999995

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=98.67  E-value=1.6e-07  Score=91.09  Aligned_cols=173  Identities=10%  Similarity=0.015  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCCCEEEEc-cCcC--hHHHHHHHH----
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKGNYYLTI-ISEE--SDYIKGFAA----  189 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~Gd~Ils~-~eh~--~~~~~~la~----  189 (311)
                      .....++.++.++++++.+.+  .|+||+|+|||+..++..+..       ..++.|++. ..+|  ......+..    
T Consensus        92 ~~~~~~~la~~l~~~~~~~~~--~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~  169 (459)
T 4a6r_A           92 THPAVVELSSLLAEVTPAGFD--RVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYM  169 (459)
T ss_dssp             CCHHHHHHHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTT
T ss_pred             CCHHHHHHHHHHHHhCCCCCC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhh
Confidence            344556888999999987655  499999999999887765421       135677643 2333  111111100    


Q ss_pred             -----hCCcEEEEEeCCC----CCcccC--------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH
Q 021539          190 -----QKESKVIAAPETW----LDLRIK--------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE  246 (311)
Q Consensus       190 -----~~G~~V~~vp~~~----~~g~id--------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~  246 (311)
                           .....+..++...    .+. .+        .++|++.++... ...+.+|.+ +.+ ..|.+.|    +++|.+
T Consensus       170 ~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~  247 (459)
T 4a6r_A          170 HEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG-ADKVAAFVGEPIQGAGGVIVPPATYWPEIER  247 (459)
T ss_dssp             C---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHH
T ss_pred             ccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC-CCCEEEEEECCccCCCCcccCCHHHHHHHHH
Confidence                 0111344555321    011 23        677888886310 012456665 433 5788888    889866


Q ss_pred             -HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          247 -AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       247 -a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                       |+++|+++++|-+|+ + |...    ++.....+|+++||  |++-|+-..+|+++.++++.
T Consensus       248 l~~~~~~llI~DEv~~g~-gr~G~~~~~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~~~~i~  307 (459)
T 4a6r_A          248 ICRKYDVLLVADEVICGF-GRTGEWFGHQHFGFQPDLFTAA--KGLSSGYLPIGAVFVGKRVA  307 (459)
T ss_dssp             HHHHTTCEEEEECTTTTT-TTTSSSSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEECHHHH
T ss_pred             HHHHcCCEEEEeccccCC-CcccccchHhhcCCCCCeeehh--hhhcCCCCCccceeeCHHHH
Confidence             699999999999998 4 4332    22223568999988  95444214589999887654

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=98.65  E-value=6.1e-08  Score=94.35  Aligned_cols=172  Identities=10%  Similarity=0.003  Sum_probs=102.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEE-ccCcC--hHHHHHHHH-----hCC--
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLT-IISEE--SDYIKGFAA-----QKE--  192 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils-~~eh~--~~~~~~la~-----~~G--  192 (311)
                      .....++.+++++++++.+. ...|+||+|+|||++.++..... ..++.|++ ...+|  ......+..     +.+  
T Consensus       105 ~~~~~~~la~~l~~~~~~~~-~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~  183 (453)
T 4ffc_A          105 PYEQYVQVAELLNALTPGDH-DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFG  183 (453)
T ss_dssp             CCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSC
T ss_pred             CCHHHHHHHHHHHHhCCCCC-CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCC
Confidence            34455688899999998642 23599999999999987754311 13356653 33444  222222110     011  


Q ss_pred             ---cEEEEEeCCC----CCccc-------CHHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-HHHCC
Q 021539          193 ---SKVIAAPETW----LDLRI-------KGSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-AHRNA  251 (311)
Q Consensus       193 ---~~V~~vp~~~----~~g~i-------d~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-a~~~g  251 (311)
                         ..+..+|...    +.|..       ..+.|++.+.++    .+.+|.+. .+ ..|.+.|    +++|.+ |+++|
T Consensus       184 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~----~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~  259 (453)
T 4ffc_A          184 PFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQ----SLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENG  259 (453)
T ss_dssp             SCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGG----GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHT
T ss_pred             CCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCC----CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcC
Confidence               1456666541    11111       124455555432    24555554 33 5688887    888866 69999


Q ss_pred             cEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          252 WHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       252 ~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +++++|-+|. + |...    .+.....+|+++||  | .+|+...+|+++.++++.+
T Consensus       260 ~llI~DEv~~g~-g~~g~~~a~~~~~~~pdi~t~s--K-~~~~G~~~G~~~~~~~i~~  313 (453)
T 4ffc_A          260 VVFIADEVQTGF-ARTGAWFASEHEGIVPDIVTMA--K-GIAGGMPLSAVTGRAELMD  313 (453)
T ss_dssp             CEEEEECTTTTT-TTTSSSSTHHHHTCCCSEEEEC--G-GGGTTSSCEEEEEEHHHHT
T ss_pred             CEEEEecCccCC-CcccccchhhhcCCCcchHhhh--h-hhcCCcCeEEEEECHHHHh
Confidence            9999999997 4 4321    12223468999988  9 5553345899998876544

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=98.63  E-value=3e-07  Score=89.31  Aligned_cols=176  Identities=9%  Similarity=0.014  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-CCCCEEEE-ccCcC--hHHHHHHHH-----hCC--
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-FKGNYYLT-IISEE--SDYIKGFAA-----QKE--  192 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-~~Gd~Ils-~~eh~--~~~~~~la~-----~~G--  192 (311)
                      .....++.+++++++++.+. ...|+||+|+|||+..++..... ..++.|++ ...+|  ......+..     +.+  
T Consensus       102 ~~~~~~~la~~l~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~  180 (451)
T 3oks_A          102 PYEGYVAVCEQLNRLTPVRG-DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFG  180 (451)
T ss_dssp             CCHHHHHHHHHHHHHSSCCS-SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCC
T ss_pred             CCHHHHHHHHHHHHhCCcCC-CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCC
Confidence            34455678889999987542 23599999999999987754311 13356654 33344  121211110     011  


Q ss_pred             ---cEEEEEeCCCC--------C----cccCHHHHHhhhhccCCCCCceEEEEec-c-cccchhc----HHHHHH-HHHC
Q 021539          193 ---SKVIAAPETWL--------D----LRIKGSQLSQNFRRKCKYTPKGLFSYPV-V-VNGTRYS----MHWISE-AHRN  250 (311)
Q Consensus       193 ---~~V~~vp~~~~--------~----g~id~~~L~~~l~~~~~~~~t~LVs~~~-~-~tG~i~P----i~~I~~-a~~~  250 (311)
                         ..+..+|....        +    +..+.+.+.+.++.......+.+|.+.. + ..|.+.|    +++|.+ |+++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~  260 (451)
T 3oks_A          181 PFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN  260 (451)
T ss_dssp             SCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred             CCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc
Confidence               15666665410        0    0112334444444211111245666543 3 5688888    899966 6999


Q ss_pred             CcEEEeccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          251 AWHVLLDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       251 g~~vlvDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |+++++|-+|. + |..    .++.....+|+++||  | .+|+...+|+++.++++.+
T Consensus       261 g~~lI~DEv~~g~-g~~g~~~~~~~~~~~pdi~t~s--K-~l~~G~~iG~v~~~~~~~~  315 (451)
T 3oks_A          261 DVVFIADEVQTGF-ARTGAMFACEHEGIDPDLIVTA--K-GIAGGLPLSAVTGRAEIMD  315 (451)
T ss_dssp             TCEEEEECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTTSSCEEEEEEHHHHT
T ss_pred             CCEEEEEecccCC-CccccchhhhhcCCCCCeeeeh--h-hhhCCcceEEEEECHHHHh
Confidence            99999999998 4 432    122223468999887  9 5553345899998876544

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=98.59  E-value=2.6e-07  Score=92.21  Aligned_cols=164  Identities=10%  Similarity=-0.029  Sum_probs=101.3

Q ss_pred             HHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CC-C-CCCEEEEccCcChHHHHHHHHhCCcEEEEEeC--CCCCcc
Q 021539          132 RNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PF-F-KGNYYLTIISEESDYIKGFAAQKESKVIAAPE--TWLDLR  206 (311)
Q Consensus       132 R~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~-~-~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~--~~~~g~  206 (311)
                      =....+.+|.+.. ....+++|+|.+++.++-+. .- + .++.|+.+-.-|.+.+..+ .-.|++.++++.  +.+...
T Consensus       122 ~ld~L~~~G~~~~-~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAl-iL~Gl~Pv~V~p~~d~~~~~  199 (501)
T 3hl2_A          122 VLDIIKLAGVHTV-ANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM-ITAGFEPVVIENVLEGDELR  199 (501)
T ss_dssp             HHHHHHHTTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHH-HHTTCEEEEECEEEETTEEE
T ss_pred             HHHHHHHcCCCCC-CcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHH-HHcCCeEEEEeeeecccccC
Confidence            3344455598743 35788999997665543332 11 1 2488764444343333332 224888888764  222567


Q ss_pred             cCHHHHHhhhhccCCCCCceEEEEeccc--ccchhcHHHHHH-HHHCCcEEEecccccCccCccc-C----CCCCC-CcE
Q 021539          207 IKGSQLSQNFRRKCKYTPKGLFSYPVVV--NGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL-A----LALHR-PDL  277 (311)
Q Consensus       207 id~~~L~~~l~~~~~~~~t~LVs~~~~~--tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl-d----l~~l~-~Df  277 (311)
                      +|++.++++|++.. .....+|..+...  .|...||++|++ ||++|++++||.|+.+ =.... +    .-.++ +|+
T Consensus       200 id~e~le~aI~e~g-a~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGa-h~~~~~~lp~sA~~~GrAD~  277 (501)
T 3hl2_A          200 TDLKAVEAKVQELG-PDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGV-QSSKCMHLIQQGARVGRIDA  277 (501)
T ss_dssp             ECHHHHHHHHHHHC-GGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCT-TCHHHHHHHHHHHHHSCCCE
T ss_pred             CCHHHHHHHHHhcC-CCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchh-hhhhhhhhHHHHHhcCCCcE
Confidence            89999999998641 0112222222222  346689999977 6999999999999886 22111 1    11245 999


Q ss_pred             EEEccccCcCCCCCceEEEEEeC
Q 021539          278 VLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       278 l~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ++.|.||+++- |-|-|+++.++
T Consensus       278 vVqS~HK~llv-pIGG~ii~~~d  299 (501)
T 3hl2_A          278 FVQSLDKNFMV-PVGGAIIAGFN  299 (501)
T ss_dssp             EEEEHHHHHCC-CSSCEEEEESC
T ss_pred             EEeccccccee-ecCceEEEeCC
Confidence            99999995555 88866666664

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=98.58  E-value=3.2e-07  Score=90.10  Aligned_cols=78  Identities=9%  Similarity=0.063  Sum_probs=55.4

Q ss_pred             CHHHHHhhhhccCC-CCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEeccccc-CccCcc--cCCCCCC--
Q 021539          208 KGSQLSQNFRRKCK-YTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGL-VFGEDQ--LALALHR--  274 (311)
Q Consensus       208 d~~~L~~~l~~~~~-~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs-v~G~~p--ldl~~l~--  274 (311)
                      ++++|++++++... ...+++|++..+  .+|.++|    +++|.+ |+++|+++++|.+|+ + |...  +.++.++  
T Consensus       241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~-g~~g~~~~~~~~gv~  319 (472)
T 1ohv_A          241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGG-GSTGKFWAHEHWGLD  319 (472)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTTSSSSGGGGGCCS
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCC-CCCCCchhccccCCC
Confidence            57788888875100 002678877543  5899988    899866 699999999999998 6 7653  3444444  


Q ss_pred             --CcEEEEccccCcCC
Q 021539          275 --PDLVLCTLDNNTHA  288 (311)
Q Consensus       275 --~Dfl~~S~HK~l~G  288 (311)
                        +|+++||  |+++|
T Consensus       320 ~~~Di~t~s--K~~l~  333 (472)
T 1ohv_A          320 DPADVMTFS--KKMMT  333 (472)
T ss_dssp             SCCSEEEEC--GGGSS
T ss_pred             CCCCEEEEc--ccccc
Confidence              8999998  93245

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=98.57  E-value=4.5e-07  Score=87.59  Aligned_cols=171  Identities=14%  Similarity=0.137  Sum_probs=99.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCC---C----CCEEEEc-cCcChHHH--HHHHH----h
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFF---K----GNYYLTI-ISEESDYI--KGFAA----Q  190 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~---~----Gd~Ils~-~eh~~~~~--~~la~----~  190 (311)
                      ....++.++.++++++...+  .|+||+|+|||+..++......   +    ++.|++. ..+|....  ..+..    +
T Consensus        86 ~~~~~~la~~l~~~~~~~~~--~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~  163 (448)
T 3dod_A           86 NVPATQLAETLIDISPKKLT--RVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFH  163 (448)
T ss_dssp             EHHHHHHHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC--------------------
T ss_pred             CHHHHHHHHHHHHhCCCCCC--EEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCcccc
Confidence            34556788899999876544  5999999999999877654210   2    4777633 23331111  11100    0


Q ss_pred             C-----CcEEEEEeCCCCCcc-----------cCHHHHHhhhhccCCCCCceEEEE-ecc--cccchhc----HHHHHH-
Q 021539          191 K-----ESKVIAAPETWLDLR-----------IKGSQLSQNFRRKCKYTPKGLFSY-PVV--VNGTRYS----MHWISE-  246 (311)
Q Consensus       191 ~-----G~~V~~vp~~~~~g~-----------id~~~L~~~l~~~~~~~~t~LVs~-~~~--~tG~i~P----i~~I~~-  246 (311)
                      .     ...+..+|... ..+           .+.++|+++++...  ..+++|.+ +..  ..|.+.|    +++|.+ 
T Consensus       164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l  240 (448)
T 3dod_A          164 HVYGPLMFESYKAPIPY-VYRSESGDPDECRDQCLRELAQLLEEHH--EEIAALSIESMVQGASGMIVMPEGYLAGVREL  240 (448)
T ss_dssp             ---------CEEECCCC-CTTSSSCCHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSEESTTTCEECCTTHHHHHHHH
T ss_pred             ccccCCCCCceEeCCCc-cccCCccchhhhhHHHHHHHHHHHHhCC--CCEEEEEEeCcccCCCCeecCCHHHHHHHHHH
Confidence            0     12234455432 111           23678888887211  12455554 432  4687877    888866 


Q ss_pred             HHHCCcEEEeccccc-CccCc----ccCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          247 AHRNAWHVLLDATGL-VFGED----QLALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       247 a~~~g~~vlvDAaQs-v~G~~----pldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      |+++|+++++|-+|+ + |..    ..+.....+|+++||  | -+|+. ..+|+++.++++.+
T Consensus       241 ~~~~~~~lI~DEv~~g~-g~~g~~~a~~~~~~~~di~t~s--K-~l~~G~~~ig~v~~~~~~~~  300 (448)
T 3dod_A          241 CTTYDVLMIVDEVATGF-GRTGKMFACEHENVQPDLMAAG--K-GITGGYLPIAVTFATEDIYK  300 (448)
T ss_dssp             HHHTTCEEEEECTTTTT-TTTSSSSGGGGGTCCCSEEEEC--G-GGGTTSSCCEEEEEEHHHHH
T ss_pred             HHHhCCEEEEeccccCC-CcccchhhhhhcCCCCCEEEec--c-cccCCcCceEEEEECHHHHH
Confidence            699999999999998 4 432    123333568999988  9 55523 25799998876543

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=98.54  E-value=3.1e-07  Score=89.12  Aligned_cols=172  Identities=9%  Similarity=0.037  Sum_probs=103.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCCCEEEEc-cCcC--hHHHHHHH------
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKGNYYLTI-ISEE--SDYIKGFA------  188 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~Gd~Ils~-~eh~--~~~~~~la------  188 (311)
                      ....++.+++++++++.+.+  .|+||+|+|||+..++..+.-       ..++.|++. ..+|  ......+.      
T Consensus        94 ~~~~~~la~~l~~~~~~~~~--~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~  171 (460)
T 3gju_A           94 TEASITLAKMIIDRAPKGMS--RVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFH  171 (460)
T ss_dssp             CHHHHHHHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGT
T ss_pred             CHHHHHHHHHHHhhCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccc
Confidence            34456788999999877654  499999999999987765421       234666643 2333  11111110      


Q ss_pred             ---HhCCcEEEEEeCCC----CCcccC--------HHHHHhhhhccCCCCCceEEEEe-cc-cccchhc----HHHHHH-
Q 021539          189 ---AQKESKVIAAPETW----LDLRIK--------GSQLSQNFRRKCKYTPKGLFSYP-VV-VNGTRYS----MHWISE-  246 (311)
Q Consensus       189 ---~~~G~~V~~vp~~~----~~g~id--------~~~L~~~l~~~~~~~~t~LVs~~-~~-~tG~i~P----i~~I~~-  246 (311)
                         ......+..+|...    ++...+        .++|++++++.. ...+++|.+. .+ .+|.+.|    +++|.+ 
T Consensus       172 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~-~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l  250 (460)
T 3gju_A          172 NAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG-PETIAAFIGEPILGTGGIVPPPAGYWEKIQAV  250 (460)
T ss_dssp             TTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHH
T ss_pred             cccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC-CCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence               00112345555321    111112        578888886310 0124566554 33 5788777    888866 


Q ss_pred             HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          247 AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       247 a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      |+++|+++++|-+|+ + |...    ++.....+|+++||  |+ +|+. ..+|+++.++++.
T Consensus       251 ~~~~~~llI~DEv~~g~-gr~g~~~~~~~~~~~pdi~t~s--K~-l~gG~~~lg~v~~~~~i~  309 (460)
T 3gju_A          251 LKKYDVLLVADEVVTGF-GRLGTMFGSDHYGIKPDLITIA--KG-LTSAYAPLSGVIVADRVW  309 (460)
T ss_dssp             HHHTTCEEEEECTTTTT-TTTSSSCHHHHHTCCCSEEEEC--GG-GTTTSSCCEEEEEEHHHH
T ss_pred             HHHcCCEEEEeccccCC-CcccccchHhhcCCCCCeeeee--hh-hcCCCCCeEEEEECHHHH
Confidence            699999999999998 5 5432    22223568999988  94 5532 2479999887643

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=98.53  E-value=2.4e-07  Score=88.51  Aligned_cols=164  Identities=18%  Similarity=0.097  Sum_probs=99.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCCCCCCEEE-EccCcCh--HHHHHHHH---------
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPFFKGNYYL-TIISEES--DYIKGFAA---------  189 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~~~Gd~Il-s~~eh~~--~~~~~la~---------  189 (311)
                      ....++.++.++++++ .++  .|+||+|+|||+..++..   +  ..++.|+ ....+|.  ..+..++.         
T Consensus        91 ~~~~~~l~~~l~~~~~-~~~--~v~~~~~g~ea~~~al~~ar~~--~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p  165 (424)
T 2e7u_A           91 SPLEVALAKKVKRAYP-FVD--LVRFVNSGTEATMSALRLARGY--TGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVP  165 (424)
T ss_dssp             CHHHHHHHHHHHHHCT-TCC--EEEEESSHHHHHHHHHHHHHHH--HCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEE
T ss_pred             CHHHHHHHHHHHHhCC-CCC--EEEEeCCHHHHHHHHHHHHHHh--hCCCEEEEECCCcCCCcHHHHHhcCCcccccCCC
Confidence            4445688899999986 444  499999999999987764   3  2345554 3333441  11100000         


Q ss_pred             -hCCc------EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHHHHHCCcEEEe
Q 021539          190 -QKES------KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISEAHRNAWHVLL  256 (311)
Q Consensus       190 -~~G~------~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~a~~~g~~vlv  256 (311)
                       ..|+      .+..+|.      .|.++|++.+++..  ..+++|.+..+  .+|.+.|    +++|.+++++|+++++
T Consensus       166 ~~~g~~~~~~~~~~~~~~------~d~~~le~~l~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~g~~lI~  237 (424)
T 2e7u_A          166 SSAGVPEEYAKLTLVLEY------NDPEGLREVLKRRG--EEIAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIA  237 (424)
T ss_dssp             SSTTCCHHHHTTEEEECT------TCHHHHHHHHHHHG--GGEEEEEECSSBCTTSCBCCCHHHHHHHHHGGGGTCEEEE
T ss_pred             CCCCCCCccCCceEeCCC------CCHHHHHHHHHhCC--CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHcCCEEEE
Confidence             0122      2334443      26788988887310  01456665433  4899988    8888544779999999


Q ss_pred             cccccCccCcc---cCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          257 DATGLVFGEDQ---LALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       257 DAaQsv~G~~p---ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      |.+|+-.....   ++.....+|++++  .| .+|+.-.+|+++.++++.+
T Consensus       238 DEv~~g~~~g~~~~~~~~~~~~di~s~--sK-~l~~G~~~G~~~~~~~~~~  285 (424)
T 2e7u_A          238 DEVMTGFRLAFGGATELLGLKPDLVTL--GK-ILGGGLPAAAYAGRREIME  285 (424)
T ss_dssp             ECTTTTTTSSTTHHHHHHTCCCSEEEE--CG-GGGTTSSCEEEEECHHHHT
T ss_pred             ecCccccccchhHHHHHhCCCcchhhh--hh-hhhCCcceEEEEEcHHHHh
Confidence            99998212111   1111245898755  59 6663335899999876544

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=98.48  E-value=6.7e-07  Score=87.86  Aligned_cols=173  Identities=12%  Similarity=0.009  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCC-------CCCCEEEEc-cCcCh--HHHHHHH-----
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPF-------FKGNYYLTI-ISEES--DYIKGFA-----  188 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~-------~~Gd~Ils~-~eh~~--~~~~~la-----  188 (311)
                      .....++.+++++++++.+.+  .|+||+|+|||+..++....-       ..++.|++. -..|.  .....+.     
T Consensus        97 ~~~~~~~lae~l~~~~~~~~~--~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~  174 (472)
T 3hmu_A           97 THVPAIALAQKLAELAPGDLN--HVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGM  174 (472)
T ss_dssp             ECHHHHHHHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHH
T ss_pred             CCHHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhh
Confidence            344556888999999877544  499999999999887664321       134566533 23331  1111110     


Q ss_pred             -Hh--CCcEEEEEeCCC----CCcccC--------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-
Q 021539          189 -AQ--KESKVIAAPETW----LDLRIK--------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-  246 (311)
Q Consensus       189 -~~--~G~~V~~vp~~~----~~g~id--------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-  246 (311)
                       ..  ....+..+|...    .+. .+        .++|++.+++.. ...+.+|.+ +.+ ..|.+.|    +++|.+ 
T Consensus       175 ~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~-~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l  252 (472)
T 3hmu_A          175 HAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG-ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRI  252 (472)
T ss_dssp             HHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHH
T ss_pred             ccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC-CCCEEEEEEcCccCCCCcccCCHHHHHHHHHH
Confidence             00  111345555421    011 22        677888886310 012466666 333 5788888    889866 


Q ss_pred             HHHCCcEEEeccccc-CccCcc----cCCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          247 AHRNAWHVLLDATGL-VFGEDQ----LALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       247 a~~~g~~vlvDAaQs-v~G~~p----ldl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      |+++|+++++|-+|+ + |...    ++.....+|+++||  |++-| . ..+|+++.++++.+
T Consensus       253 ~~~~gillI~DEv~~gf-gr~G~~~a~~~~~v~pdi~t~s--K~l~g-g~~plG~v~~~~~i~~  312 (472)
T 3hmu_A          253 CDKYDILLIADEVICGF-GRTGNWFGTQTMGIRPHIMTIA--KGLSS-GYAPIGGSIVCDEVAH  312 (472)
T ss_dssp             HHHTTCEEEEECTTTTT-TTTSSSCHHHHHTCCCSEEEEC--GGGTT-TSSCCEEEEEEHHHHH
T ss_pred             HHHcCCEEEEEccccCC-cccCccchhHHhCCCCceeeec--hhhhc-CCcceEEEEECHHHHH
Confidence            699999999999998 4 4332    12223469999998  95444 2 24799998876543

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=98.34  E-value=2.5e-06  Score=83.77  Aligned_cols=174  Identities=6%  Similarity=0.007  Sum_probs=101.6

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-C------CCCCEEEE-ccCcCh--HHHHHHHH----
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-F------FKGNYYLT-IISEES--DYIKGFAA----  189 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~------~~Gd~Ils-~~eh~~--~~~~~la~----  189 (311)
                      .....++..+.++++++.+.+  .|+||+|+|||+..++.... .      ..++.|++ .-.+|.  .....+..    
T Consensus        95 ~~~~~~~la~~l~~~~~~~~~--~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~  172 (476)
T 3i5t_A           95 ATSPAARLAEKIATLTPGDLN--RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGN  172 (476)
T ss_dssp             BCHHHHHHHHHHHTTSSTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGG
T ss_pred             CCHHHHHHHHHHHhcCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhh
Confidence            344556788889999876544  59999999999988766541 1      12456653 333341  11111100    


Q ss_pred             h--C---CcEEEEEeCCCC-Cc-ccC--------HHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-H
Q 021539          190 Q--K---ESKVIAAPETWL-DL-RIK--------GSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-A  247 (311)
Q Consensus       190 ~--~---G~~V~~vp~~~~-~g-~id--------~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a  247 (311)
                      +  .   ...+..++.... .. ..+        .++|+++++... ...+++|.+ +.+ ..|.+.|    +++|.+ |
T Consensus       173 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~-~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc  251 (476)
T 3i5t_A          173 WPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG-PDTIAAFLAEPILASGGVIIPPAGYHARFKAIC  251 (476)
T ss_dssp             CTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHH
T ss_pred             ccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence            0  0   112344443210 00 011        678888886310 012455555 434 5787777    888866 6


Q ss_pred             HHCCcEEEeccccc-CccCcc----cC-CCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          248 HRNAWHVLLDATGL-VFGEDQ----LA-LALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       248 ~~~g~~vlvDAaQs-v~G~~p----ld-l~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      +++|+++++|-+|+ + |...    +. .....+|++++|  |+ +|+. ..+|+++.++++.+
T Consensus       252 ~~~gillI~DEv~~g~-gr~G~~~~~~~~~~v~pdi~t~s--K~-l~~G~~plg~v~~~~~i~~  311 (476)
T 3i5t_A          252 EKHDILYISDEVVTGF-GRCGEWFASEKVFGVVPDIITFA--KG-VTSGYVPLGGLAISEAVLA  311 (476)
T ss_dssp             HHTTCEEEEECTTTTT-TTTSSSCHHHHTTCCCCSEEEEC--GG-GGTTSSCCEEEEECHHHHH
T ss_pred             HHcCCEEEEEecccCC-ccccCceeeecccCCCcchhhhh--hh-hcCCCcCeEEEEECHHHHH
Confidence            99999999999998 4 4321    12 233568999988  94 5432 34789998876543

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=97.32  E-value=5.5e-07  Score=89.25  Aligned_cols=168  Identities=13%  Similarity=0.030  Sum_probs=100.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEc-cCcChHHHHHHH--HhCCc--EEEEEe
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTI-ISEESDYIKGFA--AQKES--KVIAAP  199 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~-~eh~~~~~~~la--~~~G~--~V~~vp  199 (311)
                      ....+..++++++++ ..+  .|+|++++|||+..++.... +..++.|+.. ...|......+.  ...|+  .+..+|
T Consensus       140 ~~~~~Lae~L~~~~p-~~~--~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~  216 (465)
T 2yky_A          140 ENEALFAEAVCDRFP-SID--LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV  216 (465)
Confidence            334577788888885 223  39999999999988776432 2334666533 233321111111  11243  233333


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc---cC
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ---LA  269 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p---ld  269 (311)
                      .+      |.++|++++++..  ..+++|.+..+  .+|.+.|    +++|.+ |+++|+++++|-+|+. -..+   ++
T Consensus       217 ~~------d~~~l~~~l~~~~--~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~~-r~g~~~a~~  287 (465)
T 2yky_A          217 YN------DVEGTADLLKRHG--HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMTS-RLSGGGAQE  287 (465)
Confidence            21      4677888887310  12456655333  4898888    888865 6899999999999982 1111   12


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      .....+|+++||  | .+|+.-.+|+++.++++.+...|
T Consensus       288 ~~gv~pDi~t~s--K-~lg~G~piG~v~~~~~i~~~l~~  323 (465)
T 2yky_A          288 MLGISADLTTLG--K-YIGGGMSFGAFGGRRDLMERFDP  323 (465)
Confidence            222358987665  9 66632238999999888775444

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=97.77  E-value=0.00076  Score=65.02  Aligned_cols=162  Identities=6%  Similarity=-0.020  Sum_probs=101.1

Q ss_pred             HHHHHHHHHc-CC-----CCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeC-C
Q 021539          130 QARNRALKHC-GL-----SEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPE-T  201 (311)
Q Consensus       130 ~aR~~IA~~L-ga-----~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~-~  201 (311)
                      +.|+.|++++ +.     +++..+|+.|.|+++|+.+++..+. +.+ |.|+...=..... ...++..|.++..+|. +
T Consensus        76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~~  153 (405)
T 3k7y_A           76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINH-VNMIESRGFNLKYINFFD  153 (405)
T ss_dssp             HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHH-HHHHHTTTCEEEEECCEE
T ss_pred             HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhH-HHHHHHcCCeEEEEeccc
Confidence            6788888876 32     1222147999999999999887653 236 8876322111222 2345567999999987 3


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEE--e-cccccchhcHHHHH---H-HHHCCcEEEeccccc-CccCcc------
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSY--P-VVVNGTRYSMHWIS---E-AHRNAWHVLLDATGL-VFGEDQ------  267 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~--~-~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQs-v~G~~p------  267 (311)
                      ..+..+|.+.|++.+++..   .++++.+  + ++=||..++.+++.   + |++++++++.|-+.. + ....      
T Consensus       154 ~~~~~~d~~~l~~~l~~~~---~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l-~~~~~~~~~~  229 (405)
T 3k7y_A          154 YNLIDINYDLFLNDLRNIP---NGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGF-GHTNLEEDVL  229 (405)
T ss_dssp             TTTTEECHHHHHHHHHHSC---SSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTT-SSSSTTGGGH
T ss_pred             cccCCcCHHHHHHHHHhCC---CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccc-cCCCcccchH
Confidence            3245689999999987521   1344443  2 44699999987653   3 578999999997643 2 2111      


Q ss_pred             -c-CC-CCCCCcEEEEccccCcCCCC-CceEEEEE
Q 021539          268 -L-AL-ALHRPDLVLCTLDNNTHAQP-LKITCLLV  298 (311)
Q Consensus       268 -l-dl-~~l~~Dfl~~S~HK~l~G~P-~GiG~L~v  298 (311)
                       + .+ ....-=+++.|+=| .||.| -.+|++++
T Consensus       230 ~~~~~~~~~~~~i~~~S~SK-~~~l~GlRiG~~~~  263 (405)
T 3k7y_A          230 LIRKFEEKNIAFSVCQSFSK-NMSLYGERAGALHI  263 (405)
T ss_dssp             HHHHHHTTTCCEEEEEECTT-TSCCTTTTEEEEEE
T ss_pred             HHHHHHhcCCcEEEEeeCCc-cCCCccccceEEEE
Confidence             1 01 11122367789999 77733 24898864

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=96.97  E-value=0.0015  Score=64.53  Aligned_cols=182  Identities=11%  Similarity=0.017  Sum_probs=101.2

Q ss_pred             HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEc-cCcChHHHHH
Q 021539          109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTI-ISEESDYIKG  186 (311)
Q Consensus       109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~-~eh~~~~~~~  186 (311)
                      +.+.+.+..++.+...  ...+..+.+++.+.-   ...|.|++++|||+..+++.. .+...+.|++. ..+|......
T Consensus       112 v~~q~~~~~~~~~~~~--~~~~lae~l~~~~p~---~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~  186 (454)
T 4ao9_A          112 VIEAMQGGINLTGHNL--LEGRLARLICERFPQ---IEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGF  186 (454)
T ss_dssp             HHHHHHTCSCCCSEES--SHHHHHHHHHHHSTT---CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBB
T ss_pred             HHHHHhcCCCccCCcH--HHHHHHHHHHHhCCC---CCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccc
Confidence            4455544444432221  123455677777753   225999999999987755421 11123456533 2333111100


Q ss_pred             HH----HhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEE
Q 021539          187 FA----AQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVL  255 (311)
Q Consensus       187 la----~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vl  255 (311)
                      +.    ......+..+|.+      +.+.+++.+++...  .+..|.+ +.+ ..|.+.|    +++|.+ |+++|++++
T Consensus       187 ~~~~~~~~~~~~~~~~p~n------d~~~l~~~l~~~~~--~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI  258 (454)
T 4ao9_A          187 GARPSPTTVPFDFLVLPYN------DAQTARAQIERHGP--EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLV  258 (454)
T ss_dssp             SSSBCTTSCCSEEEEECTT------CHHHHHHHHHHTGG--GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEE
T ss_pred             cccccCccCCCCcccCCCc------hHHHHHHHHhhcCC--ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEE
Confidence            00    0112344445543      46778888875321  1344444 333 5788888    788866 699999999


Q ss_pred             ecccccCccCcccCC----CCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          256 LDATGLVFGEDQLAL----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       256 vDAaQsv~G~~pldl----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      +|=+|.  |..---+    -...||+++++  |.+-|+ --+|++..+++..+.-.|
T Consensus       259 ~DEV~t--GR~G~~~a~e~~gv~PDi~t~g--K~lggG-~Piga~~~~~ei~~~~~~  310 (454)
T 4ao9_A          259 FDEVMT--SRLAPHGLANKLGIRSDLTTLG--KYIGGG-MSFGAFGGRADVMALFDP  310 (454)
T ss_dssp             EECTTG--GGGSTTCHHHHHTCCCSEEEEE--GGGGTT-SSCEEEEECHHHHGGGCT
T ss_pred             EECCCc--CCCccccchhccCCCCcEEEec--cccCCC-CcceeeeeHHHHHHHHhh
Confidence            999985  4211111    12468999876  634432 248999999877665433

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=95.47  E-value=0.12  Score=50.75  Aligned_cols=174  Identities=10%  Similarity=0.052  Sum_probs=90.2

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEc-cCcC--hHHHHHHHH-----hC-----CcEE
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTI-ISEE--SDYIKGFAA-----QK-----ESKV  195 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~-~eh~--~~~~~~la~-----~~-----G~~V  195 (311)
                      +.-+++++++..+. -..|.|+.++|||+..+++- ..+...+.|++. ..+|  ......+..     +.     ...+
T Consensus       111 ~lae~L~~~~p~~~-~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~  189 (456)
T 4atq_A          111 AVTEQLNRLTPGDH-AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEV  189 (456)
T ss_dssp             HHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSE
T ss_pred             HHHHHHHHhCCCCC-CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccc
Confidence            44566777775432 23589999999998765441 111223456543 3344  221111110     01     1245


Q ss_pred             EEEeCCCC----Ccc-cCHHHHHhhhh---ccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccc
Q 021539          196 IAAPETWL----DLR-IKGSQLSQNFR---RKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       196 ~~vp~~~~----~g~-id~~~L~~~l~---~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      ..+|...+    ... .+.+.+++.++   ...+.....-|.+ +.+ +.|.+.|    ++.+.+ |+++|+++++|=+|
T Consensus       190 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~  269 (456)
T 4atq_A          190 YRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQ  269 (456)
T ss_dssp             EEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTT
T ss_pred             eecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccc
Confidence            55664321    111 11222222221   1111111333333 333 5677766    667765 69999999999999


Q ss_pred             cCccCcccC----CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccC
Q 021539          261 LVFGEDQLA----LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTS  307 (311)
Q Consensus       261 sv~G~~pld----l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~  307 (311)
                      .-.|..---    .-...||+++++  |.+-|+ -=+|+++.+++..+...
T Consensus       270 tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg-~P~~av~~~~~i~~~~~  317 (456)
T 4atq_A          270 SGFCRTGEWFAVDHEGVVPDIITMA--KGIAGG-LPLSAITGRADLLDAVH  317 (456)
T ss_dssp             TTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTT-SSCEEEEEEHHHHTTSC
T ss_pred             cccCCccccccccccCCCCchhhhh--hcccCc-CCceeeEecHHHHhccc
Confidence            832322211    112469999997  745443 12788999987655433

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=95.44  E-value=0.077  Score=51.44  Aligned_cols=167  Identities=8%  Similarity=-0.055  Sum_probs=91.4

Q ss_pred             HHHHHHHHHc-CCC--CCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChHHHHHHHHhCCcE-EEEEeC-
Q 021539          130 QARNRALKHC-GLS--EDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESDYIKGFAAQKESK-VIAAPE-  200 (311)
Q Consensus       130 ~aR~~IA~~L-ga~--~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~~~~~la~~~G~~-V~~vp~-  200 (311)
                      +-|+.+++++ |-.  .+....+-|.++|.|+...+..+.   ..+||.|+ ..-... +. ....+..|.+ |...+. 
T Consensus        91 ~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~-~y-~~i~~~aG~~~V~~~~~~  168 (420)
T 4h51_A           91 PFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWP-NH-YGVVKAAGWKNICTYAYY  168 (420)
T ss_dssp             HHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCT-HH-HHHHHHTTCCCEEEEECE
T ss_pred             HHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCch-hH-HHHHHHcCCeEEEeeccc
Confidence            5667777765 322  122123448899998876554321   35788875 332222 11 1223344665 444332 


Q ss_pred             CCCCcccCHHHHHhhhhccCCCCCceEEE--EecccccchhcHHHH---HH-HHHCCcEEEeccccc-CccCcccCC---
Q 021539          201 TWLDLRIKGSQLSQNFRRKCKYTPKGLFS--YPVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGL-VFGEDQLAL---  270 (311)
Q Consensus       201 ~~~~g~id~~~L~~~l~~~~~~~~t~LVs--~~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQs-v~G~~pldl---  270 (311)
                      +..+..++.+.+.+.+...++  ++.++.  ++++=||..++-+++   .+ +++++++++.|-+-. + .....+.   
T Consensus       169 ~~~~~~~d~~~~~~~l~~~~~--~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~-~~~~~~~~~~  245 (420)
T 4h51_A          169 DPKTVSLNFEGMKKDILAAPD--GSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGY-ASGSLDTDAY  245 (420)
T ss_dssp             EGGGTEECHHHHHHHHHHSCS--SCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT-TTSCHHHHTH
T ss_pred             cccccCCCHHHHHHHHhccCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhh-ccCCcccchH
Confidence            222345678888777764322  123332  334569999987765   33 588999999997632 3 2222111   


Q ss_pred             ------CCCCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          271 ------ALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       271 ------~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                            +....=+++.|+=| -||.| ..+|++.+..+.
T Consensus       246 ~~~~~~~~~~~~i~~~s~SK-~~~~~G~RvG~~~~~~~~  283 (420)
T 4h51_A          246 AARLFARRGIEVLLAQSFSK-NMGLYSERAGTLSLLLKD  283 (420)
T ss_dssp             HHHHHHHTTCCCEEEEECTT-TSCCGGGCEEEEEEECSC
T ss_pred             HHHhHHhhCceEEEEecccc-ccccccCceEEEEecccC
Confidence                  11122356678999 66533 139999887654

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=93.93  E-value=0.59  Score=46.01  Aligned_cols=167  Identities=13%  Similarity=0.077  Sum_probs=87.6

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---C---CCCCC-CEEEEcc-CcCh--HHHHHHH-----HhCC--
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---Y---PFFKG-NYYLTII-SEES--DYIKGFA-----AQKE--  192 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~---~~~~G-d~Ils~~-eh~~--~~~~~la-----~~~G--  192 (311)
                      +.-+++++++..+-+  .|.|+.++|||+..+++-   +   .-+++ ..|++.. .+|.  .....+.     +..+  
T Consensus       115 ~lAe~L~~~~p~~~~--~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~  192 (473)
T 4e3q_A          115 MLSEKLVEVSPFDSG--RVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLP  192 (473)
T ss_dssp             HHHHHHHHHSSCSSC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCS
T ss_pred             HHHHHHHhhCCCCcc--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCC
Confidence            444567777765433  499999999998765542   1   00122 3465433 3451  1111110     0111  


Q ss_pred             -cEEEEEeCCC-----CCccc-------CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCc
Q 021539          193 -SKVIAAPETW-----LDLRI-------KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAW  252 (311)
Q Consensus       193 -~~V~~vp~~~-----~~g~i-------d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~  252 (311)
                       ..+..++...     ..+..       ..+++++.+.+... .....|.+ +.+ +.|.+.|    ++.|.+ |+++|+
T Consensus       193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gi  271 (473)
T 4e3q_A          193 LPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGA-DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDI  271 (473)
T ss_dssp             CTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCG-GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred             CCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCC-CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccce
Confidence             1233333210     01111       12334455543211 11334444 333 5677766    567755 699999


Q ss_pred             EEEecccccCccCcccCC----CCCCCcEEEEccccCcCCC--CCceEEEEEeCCCC
Q 021539          253 HVLLDATGLVFGEDQLAL----ALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSF  303 (311)
Q Consensus       253 ~vlvDAaQsv~G~~pldl----~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~  303 (311)
                      ++++|=+|.-.|..---+    -...||+++++  |.+-|+  |  +|++++++++.
T Consensus       272 lLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~P--l~av~~~~~i~  324 (473)
T 4e3q_A          272 PVISDEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFP--MGAVILGPELS  324 (473)
T ss_dssp             CEEEECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSC--CEEEEECHHHH
T ss_pred             EEeccCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCC--cccccccHHHH
Confidence            999999998434332111    12469999886  755543  4  78898887654

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=86.27  E-value=1.1  Score=47.31  Aligned_cols=91  Identities=16%  Similarity=0.215  Sum_probs=52.6

Q ss_pred             HHHHhhhhcc---CCCCCceEEEE-ec-c-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcccCCC----CCC
Q 021539          210 SQLSQNFRRK---CKYTPKGLFSY-PV-V-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLALA----LHR  274 (311)
Q Consensus       210 ~~L~~~l~~~---~~~~~t~LVs~-~~-~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~  274 (311)
                      +.|++.|++.   .....+..|.+ +. + ..|.+.|    +++|.+ |+++|+++++|=+|.-.|..---+.    ...
T Consensus       577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~  656 (831)
T 4a0g_A          577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK  656 (831)
T ss_dssp             HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred             HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence            4566666531   00112445554 33 3 4677765    777765 6999999999987772143221111    246


Q ss_pred             CcEEEEccccCcCCC--CCceEEEEEeCCCCc
Q 021539          275 PDLVLCTLDNNTHAQ--PLKITCLLVRRKSFD  304 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~  304 (311)
                      +|+++++  |++-|+  |  +|+++.++++.+
T Consensus       657 PDiitls--K~L~gG~~P--lgav~~~~~i~~  684 (831)
T 4a0g_A          657 PDIACFA--KLLTGGMVP--LAVTLATDAVFD  684 (831)
T ss_dssp             CSEEEEC--GGGGTTSSC--CEEEEECHHHHH
T ss_pred             CcEEEEe--cccccCccC--cEEEEECHHHHH
Confidence            8998766  844332  3  688998876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	311
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	100.0
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	100.0
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.97
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.97
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.95
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.93
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.93
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.93
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.91
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.91
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.9
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.87
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.79
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.75
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.73
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.71
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.58
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.57
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.55
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.47
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.33
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.18
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.14
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.13
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.06
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	98.99
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	98.98
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	98.97
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	98.95
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	98.94
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	98.84
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	98.8
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	98.8
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	98.8
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	98.78
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	98.76
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	98.75
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	98.74
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	98.74
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.73
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	98.7
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	98.67
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	98.67
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	98.66
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	98.64
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	98.63
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	98.6
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	98.59
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	98.59
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	98.49
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	98.39
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	98.34
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	98.33
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	98.31
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	98.27
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	98.25
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	98.24
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	98.19
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	98.13
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	98.09
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	98.09
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	98.09
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.08
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.04
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	98.04
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	98.03
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	97.96
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	97.85
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	97.61
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	97.25
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	96.93
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	96.48
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	96.32
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	96.07
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	96.07
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	96.03
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	95.97
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	95.75
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	95.41
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	94.96
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	93.6
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	93.26
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	92.62
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	85.5
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	82.65

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-37  Score=296.39  Aligned_cols=229  Identities=14%  Similarity=0.097  Sum_probs=185.6

Q ss_pred             HHHHHHhhccCccCC------cccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhc
Q 021539           41 VEQYVFAKYPQYYNG------IVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILS  114 (311)
Q Consensus        41 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  114 (311)
                      |++.+. +||.++++      +|.|+++++     ..-+++.....+. .++.++|+++++           .       
T Consensus         4 ~~~vR~-~FP~l~~~~~~~~~iYld~a~~~-----~~p~~v~~~~~~~-~~~~~~n~~~~~-----------~-------   58 (405)
T d1jf9a_           4 VDKVRA-DFPVLSREVNGLPLAYLDSAASA-----QKPSQVIDAEAEF-YRHGYAAVHRGI-----------H-------   58 (405)
T ss_dssp             HHHHHH-TCGGGGCEETTEECEECCTTTCC-----CCCHHHHHHHHHH-HHHTCCCCSSCS-----------S-------
T ss_pred             HHHHHH-hChhcccCcCCCCeEEEeCcccc-----CCCHHHHHHHHHH-HHhccCCCccch-----------h-------
Confidence            677665 99999865      799998887     2222222222233 234677777533           0       


Q ss_pred             CCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc---CCCCCCCEEE-EccCcCh--HHHHHHH
Q 021539          115 KKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES---YPFFKGNYYL-TIISEES--DYIKGFA  188 (311)
Q Consensus       115 ~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s---~~~~~Gd~Il-s~~eh~~--~~~~~la  188 (311)
                          ..|..+...++++|+.+|++||+.+. ++|+||+|+|+|+|+++.+   ..+.+|++|+ +..||++  ..|+.++
T Consensus        59 ----~~~~~~~~~~e~~R~~ia~~l~~~~~-~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a  133 (405)
T d1jf9a_          59 ----TLSAQATEKMENVRKRASLFINARSA-EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLC  133 (405)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHTTCSCG-GGEEEESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHcCCCCc-ccccccCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHH
Confidence                12556677889999999999998643 3599999999999999887   4567899875 7888885  4678888


Q ss_pred             HhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC
Q 021539          189 AQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE  265 (311)
Q Consensus       189 ~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~  265 (311)
                      ++.|++|+++|++. +|.++.+.++++++++     |+||+++++  .+|+++|+++|.+ ||++|++++|||+|++ |+
T Consensus       134 ~~~g~~v~~~~~~~-~g~~~~~~~~~~i~~~-----t~lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~-g~  206 (405)
T d1jf9a_         134 ARVGAELRVIPLNP-DGTLQLETLPTLFDEK-----TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAV-MH  206 (405)
T ss_dssp             HHHTCEEEEECBCT-TSCBCGGGHHHHCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT-TT
T ss_pred             HHcCcEEEEECCCC-CCcCCHHHHHHhccCC-----cEEEEEecCCCcccccCchHHhhhHHHHcCCeeecccceec-cc
Confidence            88899999999986 7899999999998875     789999988  5999999999966 7999999999999999 99


Q ss_pred             cccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          266 DQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       266 ~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      .++|++++++||+++|+|| |+| |+|+|+||++++..+...|
T Consensus       207 ~~id~~~~~~D~~~~s~hK-~~G-p~G~g~l~v~~~~~~~~~~  247 (405)
T d1jf9a_         207 HPVDVQALDCDFYVFSGHK-LYG-PTGIGILYVKEALLQEMPP  247 (405)
T ss_dssp             SCCCHHHHTCSEEEEEGGG-TTS-CSSCEEEEECHHHHTTCCC
T ss_pred             cccchhhcCCceeeccccc-ccc-CCCceeeeechhhhcccCc
Confidence            9999999999999999999 688 9999999999987766444

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=100.00  E-value=3e-34  Score=275.44  Aligned_cols=226  Identities=14%  Similarity=0.097  Sum_probs=179.0

Q ss_pred             HHhhccCccCC------cccCCCCCCccccccccccccccchhhhhcCCCCCCCCCCCCccccccccchhHHHHhcCCCC
Q 021539           45 VFAKYPQYYNG------IVEPEDTHDLENLCVDEESTETGIDEKRKSSPKSSSPSFNFNDLDKSQLEPSRLLDILSKKTS  118 (311)
Q Consensus        45 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ss  118 (311)
                      |.++||-+++.      +|.|+++++     ...+++.....+. .++.++|+|+..           .           
T Consensus         7 iR~~FP~l~~~~~~~~~iYld~a~~~-----~~p~~v~~~~~~~-~~~~~~n~~s~~-----------~-----------   58 (408)
T d1t3ia_           7 VRQDFPILNQEINGHPLVYLDNAATS-----QKPRAVLEKLMHY-YENDNANVHRGA-----------H-----------   58 (408)
T ss_dssp             HGGGCGGGSCEETTEECEECBTTTCC-----CCCHHHHHHHHHH-HHHTCCCC--CC-----------S-----------
T ss_pred             HHHhCcccccccCCCCeEEeeCcccc-----CCCHHHHHHHHHH-HHhcCCCCCchh-----------h-----------
Confidence            55689988754      799998887     2222221111222 335677776532           0           


Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEE-EccCcCh--HHHHHHHHhCC
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYL-TIISEES--DYIKGFAAQKE  192 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Il-s~~eh~~--~~~~~la~~~G  192 (311)
                      ..|..+...+|++|+.+|++||+++++ .|+||+|+|+++|+++.++   .+++|++|+ +..||++  ..++.++++.|
T Consensus        59 ~~~~~~~~~~e~aR~~ia~llga~~~~-~i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g  137 (408)
T d1t3ia_          59 QLSVRATDAYEAVRNKVAKFINARSPR-EIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTG  137 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSCGG-GEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCcc-cEEeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccC
Confidence            136677788899999999999997533 4999999999999998873   567899986 6778884  45677778889


Q ss_pred             cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC
Q 021539          193 SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       193 ~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld  269 (311)
                      +++..+|.+. ++.++.+.|+++++++     |+||+++++  .+|.++|+++|.+ +|++|+++++||+|++ |+.|+|
T Consensus       138 ~~v~~~~~~~-~~~~~~~~l~~~~~~~-----t~lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~-g~~~id  210 (408)
T d1t3ia_         138 AVLKFVQLDE-QESFDLEHFKTLLSEK-----TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSA-PHYPLD  210 (408)
T ss_dssp             CEEEEECBCT-TSSBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTT-TTSCCC
T ss_pred             ceEeeeeccc-cccccHHHhhhccCCC-----ceEEEEecccccccccCcHHHHhhhhhccCceeeeccceec-cccccc
Confidence            9999999876 6788999999998775     789999987  6999999999976 7999999999999999 999999


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSS  308 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p  308 (311)
                      ++++++||+++|+|| |+| |+|+|+||++++......|
T Consensus       211 ~~~~~~D~~~~s~hK-~~g-p~G~g~l~v~~~~~~~~~p  247 (408)
T d1t3ia_         211 VQLIDCDWLVASGHK-MCA-PTGIGFLYGKEEILEAMPP  247 (408)
T ss_dssp             HHHHTCSEEEEEGGG-TTS-CTTCEEEEECHHHHHHSCC
T ss_pred             ccccCCceEEecccc-ccC-CCCccccccchhhhhcCCc
Confidence            999999999999999 788 9999999999887655333

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=8e-31  Score=246.17  Aligned_cols=172  Identities=18%  Similarity=0.121  Sum_probs=147.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---CCCCCCEEEEccCcChH--HHHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---PFFKGNYYLTIISEESD--YIKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---~~~~Gd~Ils~~eh~~~--~~~~la~~~G~~V  195 (311)
                      +..+...++++|+++|+++|+++++  |+||+|+|+++++++.++   .+.+|+.+++..+|+..  .+...++++|++|
T Consensus        39 ~~~~~~~~~~aR~~ia~l~~~~~~~--i~~~~~~T~~l~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v  116 (376)
T d1eg5a_          39 GIEANLHMEKAREKVAKVLGVSPSE--IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKV  116 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCGGG--EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCc--EEEECCHHHHHHhhhhcccccccccCcccccccccchhhHHHHHHHHhcCCEE
Confidence            5667777899999999999998776  999999999999998753   45677888877776733  2344456779999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-H--HHCCcEEEecccccCccCcccCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-A--HRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a--~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      +.+|++. ++++|.++++++++++     |+||+++++  .||.++|++++.+ +  +..|++++|||+|++ |+.|+|+
T Consensus       117 ~~vp~~~-~~~id~~~l~~~i~~~-----t~lv~is~v~~~tG~~~~~~~i~~~~~~~~~~~~~~vD~~q~~-g~~~~d~  189 (376)
T d1eg5a_         117 KYVPVDS-RGVVKLEELEKLVDED-----TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTI-GKIPFSL  189 (376)
T ss_dssp             EECCBCT-TSCBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTT-TTSCCCC
T ss_pred             EEEcCCC-CCeECHHHHHHhcCCC-----ceEEEEECCccccceeeeehhhhhhhhhcccCceeEEEeeecc-ccccccc
Confidence            9999986 7899999999999875     789999988  5999999999965 3  556999999999999 9999999


Q ss_pred             CCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          271 ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      .++++||+++|+|| |+| |+|+|+||++++..
T Consensus       190 ~~~~~D~~~~s~~K-~~g-p~G~~~l~~~~~~~  220 (376)
T d1eg5a_         190 EKLEVDYASFSAHK-FHG-PKGVGITYIRKGVP  220 (376)
T ss_dssp             TTTCCSEEEEEGGG-GTS-CTTCEEEEECTTSC
T ss_pred             cccCccceecccce-eec-CCCceeEEeccCcc
Confidence            99999999999999 688 99999999998753

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.7e-30  Score=245.55  Aligned_cols=178  Identities=20%  Similarity=0.110  Sum_probs=152.2

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC---CCCCCEEE-EccCcChH-HHHHHHHhCCcEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP---FFKGNYYL-TIISEESD-YIKGFAAQKESKV  195 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~---~~~Gd~Il-s~~eh~~~-~~~~la~~~G~~V  195 (311)
                      |..+...++++|+++|+++|+++++  |+||+|+|++++.++.++.   +++|++|+ +..+|++. .+...++..|++|
T Consensus        43 ~~~~~~~~~~~R~~iA~~lg~~~~~--I~~~~~~t~~l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v  120 (391)
T d1p3wa_          43 GWQAEEAVDIARNQIADLVGADPRE--IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV  120 (391)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGG--EEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCc--EEEECCHHHHHHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEE
Confidence            6677788899999999999998876  9999999999999988753   46899987 45555532 2223355679999


Q ss_pred             EEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCC
Q 021539          196 IAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALAL  272 (311)
Q Consensus       196 ~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~  272 (311)
                      ..+|.+. ++.+++++++++++++     |++|+++++  .||+++|+++|.+ +|++|+++++|++|++ |..|+|+..
T Consensus       121 ~~v~~~~-~~~~d~~~~~~~i~~~-----T~lv~is~~~n~tG~~~~~~~I~~~~~~~~~~~ivD~~~~~-g~~~~d~~~  193 (391)
T d1p3wa_         121 TYLAPQR-NGIIDLKELEAAMRDD-----TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSV-GKLPIDLSQ  193 (391)
T ss_dssp             EEECCCT-TSCCCHHHHHHHCCTT-----EEEEECCSBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTB-TTBCCCTTT
T ss_pred             EEeCCCC-CCeEcHHHHHHhCCCC-----cEEEEEECCCCCCeeECCHHHHHHHhccCCcEEEEeecccc-CCccccchh
Confidence            9999985 7889999999999875     789999877  5999999999976 6999999999999999 999999999


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      .++||+++|+|| |+| |.|+|++|++++......|.
T Consensus       194 ~~~D~~~~s~~k-~~g-~~g~g~~~~~~~~~~~~~~~  228 (391)
T d1p3wa_         194 LKVDLMSFSGHK-IYG-PKGIGALYVRRKPRVRIEAQ  228 (391)
T ss_dssp             SCCSEEEEESTT-TTS-CSSCEEEEECBTTBCCCCCS
T ss_pred             cccccccccccc-ccC-CCceEEEEEecchhcccCCc
Confidence            999999999999 788 88999999999887765543

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=8.7e-30  Score=239.09  Aligned_cols=180  Identities=15%  Similarity=0.104  Sum_probs=147.9

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh--HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES--DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~--~~~~~la~~~G~~V~~  197 (311)
                      +......++++|+.+|+++|+++++  |+||+|+|+|+|+++.++.+++|+.|+ +..+|++  ..++.++++.|+++..
T Consensus        45 ~~~~~~~~~~~r~~la~~~~~~~~~--i~~~~g~t~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~  122 (381)
T d1elua_          45 NQHIQQLIAQLRQALAETFNVDPNT--ITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRF  122 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCGGG--EEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCccc--EEEECChHHHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccc
Confidence            4455566789999999999998765  999999999999999999999999986 6667764  3466777777999999


Q ss_pred             EeCCCCCcc-cCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHH----CCcEEEecccccCccCcccC
Q 021539          198 APETWLDLR-IKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHR----NAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       198 vp~~~~~g~-id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~----~g~~vlvDAaQsv~G~~pld  269 (311)
                      +|.+..... ...+.+++.++++     +++|++++.  .||+++|+++|.+ ||+    .|+.+++|++|++ |+.++|
T Consensus       123 v~~~~~~~~~~~~~~l~~~i~~~-----t~~v~i~~~~n~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~-g~~~~~  196 (381)
T d1elua_         123 FPVAATLNQGDAAAVLANHLGPK-----TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSA-GSLPLD  196 (381)
T ss_dssp             ECCGGGSSSSCHHHHHHTTCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTB-TTBCCC
T ss_pred             cccccccccchHHHHHHhhhccc-----ccccccccccccccccchhhHHHHHHhhccccccccccccccccc-cccccc
Confidence            997642111 1245566666654     689998876  5999999999966 566    5799999999999 999999


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      ++++++||+++|+|| |+|+|.|+|+||++++..+...|+
T Consensus       197 ~~~~~~D~~~~s~~K-~~~~p~G~g~l~~~~~~~~~~~p~  235 (381)
T d1elua_         197 FSRLEVDYYAFTGHK-WFAGPAGVGGLYIHGDCLGEINPT  235 (381)
T ss_dssp             TTTSCCSEEEEESSS-TTCCCTTCEEEEECTTTGGGCCCC
T ss_pred             ccccccccccccccc-cccccchhhHHHhhHHHHHhcCcc
Confidence            999999999999999 555599999999999998876664

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.95  E-value=6.6e-28  Score=223.46  Aligned_cols=193  Identities=11%  Similarity=-0.002  Sum_probs=141.0

Q ss_pred             HHHHhcC-CCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHH
Q 021539          109 LLDILSK-KTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGF  187 (311)
Q Consensus       109 l~~~l~~-~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~l  187 (311)
                      +++.+.. .-++.+......++++|+++++++|+++++..|+||+|+|+++++++.++.+..++.+++..+++...+...
T Consensus        15 V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   94 (361)
T d1m32a_          15 VKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEM   94 (361)
T ss_dssp             HHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHH
T ss_pred             HHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccccceeeehhhhhhHHHH
Confidence            4455433 334456666677899999999999998765568899999999999999997655555555555443322222


Q ss_pred             HHhCCcEEEEEeCCCCCcccCH--HHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccC
Q 021539          188 AAQKESKVIAAPETWLDLRIKG--SQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLV  262 (311)
Q Consensus       188 a~~~G~~V~~vp~~~~~g~id~--~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv  262 (311)
                      ++..+..+..+.... +.....  +.+.....++     +++|+++++  ++|.++|+++|.+ ||++|+++++||+|++
T Consensus        95 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~qs~  168 (361)
T d1m32a_          95 AGLMGIAHHAYDCGE-VARPDVQAIDAILNADPT-----ISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF  168 (361)
T ss_dssp             HHHHTCCEEEEECCT-TSCCCHHHHHHHHHHCTT-----CCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             hhhhhcccccccccc-cCCccchhhHHHHHhccC-----ccceEEEeeecccccchhhhhhhhhhcccceeeEeeccccc
Confidence            333344444444432 222222  2223333332     689999887  6999999999976 6999999999999999


Q ss_pred             ccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          263 FGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       263 ~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                       |+.|+|++++++||+++|+|||++| |.|+|+||++++..+...|+
T Consensus       169 -G~~~~d~~~~~~D~~~~s~~K~l~g-p~G~g~l~~~~~~~~~~~~~  213 (361)
T d1m32a_         169 -GGIPMDIAALHIDYLISSANKCIQG-VPGFAFVIAREQKLAACKGH  213 (361)
T ss_dssp             -TTSCCCTTTTTCSEEEEESSSTTCC-CSSEEEEEEEHHHHTTCTTC
T ss_pred             -CcccccccccccceEEeeecccccC-CCCceEEEechhhhhhhccc
Confidence             9999999999999999999995556 99999999998877665443

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.93  E-value=2.6e-27  Score=222.97  Aligned_cols=171  Identities=13%  Similarity=0.044  Sum_probs=132.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC-----CCCCCCEE-EEccCcChHHHHHHHHhCCcEEEEE
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY-----PFFKGNYY-LTIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~-----~~~~Gd~I-ls~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      ...++++|+++|+++||++++  |+||+|+|+++|+++.+.     .+.+++.+ ++..+|+.+.....  +.+.++..+
T Consensus        69 ~~~~e~~R~~iA~llga~~~e--i~~~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~  144 (404)
T d1qz9a_          69 RDLSERLGNRLATLIGARDGE--VVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIA--EGLADMLQQ  144 (404)
T ss_dssp             GGHHHHHHHHHHTTTTCCTTS--EEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHH--HHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHhCCCCCc--EEEecCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHH--hhhheeeee
Confidence            456789999999999999887  999999999999876532     22456665 46666664432111  112223333


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~  275 (311)
                      +++. ++.++.+.++++++++     |+||+++++  .||+++|+++|.+ ||++|+.++||++|++ |+.++|++.+++
T Consensus       145 ~~~~-~~~~~~~~~~~~i~~~-----T~lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~-g~~~~~~~~~~~  217 (404)
T d1qz9a_         145 GYTL-RLVDSPEELPQAIDQD-----TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSA-GAVPVDLHQAGA  217 (404)
T ss_dssp             SCEE-EEESSGGGHHHHCSTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTT-TTSCCCHHHHTC
T ss_pred             ceec-cccccchhHHHhcCCC-----ceEEEEecccccccceecHHHHhccccccccceeEEeeccc-cccccccccccc
Confidence            3333 4566777888888875     789999988  5999999999976 7999999999999999 999999999999


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      ||+++|+|||++|+|.|.|++|++++..+..
T Consensus       218 d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~  248 (404)
T d1qz9a_         218 DYAIGCTYKYLNGGPGSQAFVWVSPQLCDLV  248 (404)
T ss_dssp             SEEEECSSSTTCCCTTCCCEEEECTTTTTTS
T ss_pred             eEEEEechhhcccCCceEEEEEechhhhhhC
Confidence            9999999997666465689999998887653

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.8e-26  Score=215.14  Aligned_cols=186  Identities=9%  Similarity=0.014  Sum_probs=147.8

Q ss_pred             HHHHhcC-CCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHH
Q 021539          109 LLDILSK-KTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKG  186 (311)
Q Consensus       109 l~~~l~~-~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~  186 (311)
                      +++.+.. .-++.+......++++|+.+++++|++ ++|.|+||+|+|++++.++.++ +.+|+.++ ...+|++..+..
T Consensus        34 Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~-~~~~ii~~gsgT~a~~~~i~~l-~~~~~~~~~~~~~~~~~~~~~  111 (388)
T d1h0ca_          34 IMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTR-NPLTLVISGSGHCALEAALVNV-LEPGDSFLVGANGIWGQRAVD  111 (388)
T ss_dssp             HHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCC-CSEEEEESSCHHHHHHHHHHHH-CCSSCCEEECBSSHHHHHHHH
T ss_pred             HHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEcCcHHHHHHHHHHHh-hccCCceeeecccceeeeecc
Confidence            4455533 446667788888999999999999996 4668999999999999999988 45677765 455555555555


Q ss_pred             HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      .+...+..+..++.++ .+.++.+++++.+...    ++++|+++++  ++|+++|+++|.+ +|++|++++|||+|++ 
T Consensus       112 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~-  185 (388)
T d1h0ca_         112 IGERIGARVHPMTKDP-GGHYTLQEVEEGLAQH----KPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASL-  185 (388)
T ss_dssp             HHHHHC--CBCCBCCT-TCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTT-
T ss_pred             ccccccccccccccCC-ccccchHHHHHHhccC----CcceEEEeeeeeccccccCHHHHHHHhhcccccceecccccc-
Confidence            5555577777777765 5667888887766653    2579999887  6999999999976 6999999999999999 


Q ss_pred             cCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          264 GEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       264 G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |+.++|++++++||+++|+|||+.| |.|+|+++++++..
T Consensus       186 g~~~~d~~~~~~D~~~~s~~K~~~g-p~g~~~~~~~~~~~  224 (388)
T d1h0ca_         186 GGTPLYMDRQGIDILYSGSQKALNA-PPGTSLISFSDKAK  224 (388)
T ss_dssp             TTSCCCTTTTTCSEEEEESSSTTCC-CTTCEEEEECHHHH
T ss_pred             ccccccccccccceecccccccccC-CCceEEEeecHHHH
Confidence            9999999999999999999994445 99999999987544

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=9.1e-26  Score=211.53  Aligned_cols=193  Identities=9%  Similarity=0.036  Sum_probs=145.0

Q ss_pred             hhHHHHhcCCC-CcchhhhhHHHHHHHHHHHHHcCCC--CCCCeEEEeCCHHHHHHHHHhcC--CCCCCCEEE-EccCcC
Q 021539          107 SRLLDILSKKT-SFKGNFISIPEIQARNRALKHCGLS--EDEYLVLFVPNYKEAMLMIGESY--PFFKGNYYL-TIISEE  180 (311)
Q Consensus       107 ~~l~~~l~~~s-s~~G~~~~~~le~aR~~IA~~Lga~--~dey~VvFTsnaTealnlv~~s~--~~~~Gd~Il-s~~eh~  180 (311)
                      .++++.+.+.. ++.+.......+++++.+.+++++.  .+...|+||+|+|+|+|.++.++  .+++||+++ ...+|+
T Consensus        16 ~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~vlv~~~~~~   95 (382)
T d2bkwa1          16 GAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTF   95 (382)
T ss_dssp             HHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHH
T ss_pred             HHHHHHhCcccCCCCcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCceEEEEechh
Confidence            44566665443 3334455556677777777777752  12335999999999999999987  457899886 445555


Q ss_pred             hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-H--HHCCcEEE
Q 021539          181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-A--HRNAWHVL  255 (311)
Q Consensus       181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a--~~~g~~vl  255 (311)
                      ++.+...++..|..+..+.....+..++.+.+++.+...    ++++++++++  +||+++|++++.+ +  |..+++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~  171 (382)
T d2bkwa1          96 SDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQN----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFV  171 (382)
T ss_dssp             HHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHS----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEE
T ss_pred             hhhhhhhccccccccccccccCCCCccchhHHHHHhhhc----cchheeeeeccccccccccchhhhhhccccccceeee
Confidence            665656667778888776543334557788888777653    2578888877  6999999999865 3  45679999


Q ss_pred             ecccccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          256 LDATGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       256 vDAaQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      |||+|++ |+.|+|++++++||+++|+|| ++++|+|+|++|++++..+.
T Consensus       172 vDa~qs~-g~~pid~~~~giD~~~~s~~K-~l~gP~G~g~l~vs~~~~~~  219 (382)
T d2bkwa1         172 VDAVCSI-GCEEFEFDEWGVDFALTASQK-AIGAPAGLSISLCSSRFMDY  219 (382)
T ss_dssp             EECTTTT-TTSCCCTTTTTCSEEEEESSS-TTCCCSCEEEEEECHHHHHH
T ss_pred             eeccccc-ccccccccccCeeEEeecccc-cCcCCCchhhhhccHHHHhh
Confidence            9999999 999999999999999999999 55449999999999876543

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=6.7e-24  Score=195.72  Aligned_cols=170  Identities=15%  Similarity=0.072  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeCCC-CC
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPETW-LD  204 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~-~~  204 (311)
                      ..+..|+++|+++|++  +  ++||+|+|+|++.++.++ .++||+|+ ...+|++..  ..++..|+++..+|.+. .+
T Consensus        48 l~~~~~~~~A~~~g~e--~--~~~t~g~t~a~~~~~~al-~~~gd~Vi~~~~~h~s~~--~~~~~~g~~v~~v~~~~~~~  120 (364)
T d2e7ja1          48 IHDFIHNQLPKFLGCD--V--ARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSY--VAAERAGLNIALVPKTDYPD  120 (364)
T ss_dssp             HHHHHHTHHHHHTTSS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHH--HHHHHTTCEEEEECCCCTTT
T ss_pred             HHHHHHHHHHHHhCcC--E--EEEECcHHHHHHHHHHHH-hCCCcEEEeecccccccc--hHHHhccceEEEeeeccccc
Confidence            3467899999999983  3  999999999999999988 47899986 555665432  22455699999999753 35


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCT  281 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S  281 (311)
                      +.++.+++++.++++++...+.||++++.  .+|.++|+++|.+ ||++|+++++|++|++ |+.++++.++++|++++|
T Consensus       121 ~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~-g~~~~~~~~~g~D~~~~S  199 (364)
T d2e7ja1         121 YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAI-GRMPVSLKEIGADFIVGS  199 (364)
T ss_dssp             CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTB-TTBCCCHHHHTCSEEEEE
T ss_pred             cccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecchhheeccccccchhhccccchh-hhhhhcccccccceeeec
Confidence            68999999999987665455678888765  5899999999976 6999999999999999 999999999999999999


Q ss_pred             cccCcCCCCCceEEEEEeCCCCcc
Q 021539          282 LDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       282 ~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +|| +||.|.|+|+++.+++..+.
T Consensus       200 ~~K-~~~~~g~~g~l~~~~~~~~~  222 (364)
T d2e7ja1         200 GHK-SMAASGPIGVMGMKEEWAEI  222 (364)
T ss_dssp             HHH-HSSCCSSCEEEEECTTTTTT
T ss_pred             ccc-ccCCCCCEEEEEECHHHHHH
Confidence            999 77767779999999887654

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.91  E-value=1.4e-23  Score=196.13  Aligned_cols=190  Identities=10%  Similarity=0.014  Sum_probs=147.5

Q ss_pred             ccchhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh
Q 021539          104 LEPSRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES  181 (311)
Q Consensus       104 ~~~~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~  181 (311)
                      +.++ +++.+... -++.+......++++|+.++++||+++ .+.|+||+|+|++++.++.++. .+|+.++ ...+|.+
T Consensus        28 ~~~~-V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~-~~~i~~~gsgT~a~ea~~~~l~-~~~~~vl~~~~g~~~  104 (388)
T d2ch1a1          28 CSKR-VLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTEN-RATMCVSGSAHAGMEAMLSNLL-EEGDRVLIAVNGIWA  104 (388)
T ss_dssp             CCHH-HHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCC-SCEEEESSCHHHHHHHHHHHHC-CTTCEEEEEESSHHH
T ss_pred             CCHH-HHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCC-CeEEEEcCcHHHHHHHHHHHhc-ccccccccccccccc
Confidence            3444 45555444 366688888899999999999999963 3457788899999999999984 5677775 4444445


Q ss_pred             HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecc
Q 021539          182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDA  258 (311)
                      ..+...+++.+..+..++..+ +...+.+.++......    .+.+++++++  ++|+++|+++|.. +|++|++++||+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~  179 (388)
T d2ch1a1         105 ERAVEMSERYGADVRTIEGPP-DRPFSLETLARAIELH----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDA  179 (388)
T ss_dssp             HHHHHHHHHTTCEEEEEECCT-TSCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEEC
T ss_pred             ccchhhhhhhccccccccccc-ccccchhhhhhhhccC----Ccceeeeeecccccccccchhhhcchhccccceeeeee
Confidence            555555666788887777765 4456666666665543    2578888877  6999999999966 699999999999


Q ss_pred             cccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          259 TGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       259 aQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      +|++ |..|+|++++++||+++|+|||+.| |.|+|+++++++..
T Consensus       180 ~ss~-g~~pid~~~~~~d~~~~s~~K~~~g-p~G~g~~~~~~~~~  222 (388)
T d2ch1a1         180 VASL-CGVPFYMDKWEIDAVYTGAQKVLGA-PPGITPISISPKAL  222 (388)
T ss_dssp             TTTB-TTBCCCTTTTTCCEEECCCC-CCCC-CSSCEEEEECHHHH
T ss_pred             eecc-cccccchhccCceEEEEccccccCC-CCeEEEEeccHHHH
Confidence            9999 9999999999999999999994445 99999999987544

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.90  E-value=5.5e-24  Score=197.55  Aligned_cols=191  Identities=10%  Similarity=0.077  Sum_probs=148.0

Q ss_pred             ccchhHHHHh-cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh
Q 021539          104 LEPSRLLDIL-SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES  181 (311)
Q Consensus       104 ~~~~~l~~~l-~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~  181 (311)
                      ..+. +++.+ ...-++.+......++++|+.++++||++ ++|.|+||+|+|++++.++.++. .+|+.++ ...+|..
T Consensus        29 v~~~-Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~-~~~~i~~~g~gT~~~~~~~~~~~-~~~~~~~~~~~~~~~  105 (377)
T d1vjoa_          29 AHPS-VLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTE-NPLTIAVSGTGTAAMEATIANAV-EPGDVVLIGVAGYFG  105 (377)
T ss_dssp             CCHH-HHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCC-CSCEEEESSCHHHHHHHHHHHHC-CTTCEEEEEESSHHH
T ss_pred             CCHH-HHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCC-CCeEEEEcCcHHHHHHHHHHhcc-ccccccceeeechhh
Confidence            3444 44444 44446668888889999999999999996 45689999999999999999874 5677764 5556666


Q ss_pred             HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecc
Q 021539          182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDA  258 (311)
Q Consensus       182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDA  258 (311)
                      ..+...++..+..+..+.... +.....+.........    .+.+|+++++  ++|+++|+++|.+ +|++|+.+++||
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa  180 (377)
T d1vjoa_         106 NRLVDMAGRYGADVRTISKPW-GEVFSLEELRTALETH----RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDT  180 (377)
T ss_dssp             HHHHHHHHHTTCEEEEEECCT-TCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEEC
T ss_pred             hhhhhhhhhhcccccccccCC-CCcccchhhhhhhhcC----cceeeeeeeeeccceeeechhhhhhhhhhccceEEEec
Confidence            655555666677776766654 3334555555444433    2578888877  6999999999976 699999999999


Q ss_pred             cccCccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          259 TGLVFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       259 aQsv~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +|++ |..++|++.+++||+++|+|||++| |.|+|+++++++..+
T Consensus       181 ~~~~-g~~~~~~~~~~~d~~~~s~~K~~~g-p~g~~~~~~~~~~~~  224 (377)
T d1vjoa_         181 VTSL-GGVPIFLDAWGVDLAYSCSQKGLGC-SPGASPFTMSSRAIE  224 (377)
T ss_dssp             TTTT-TTSCCCTTTTTCSEEECCSSSTTCS-CSSCEEEEECHHHHH
T ss_pred             chhh-hhhhhcccccccceeeecccccccC-CCEEEEecchhhHHh
Confidence            9999 9999999999999999999995566 999999999986544

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=4.2e-22  Score=188.06  Aligned_cols=187  Identities=10%  Similarity=0.021  Sum_probs=146.5

Q ss_pred             HHHHh-cCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHH
Q 021539          109 LLDIL-SKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKG  186 (311)
Q Consensus       109 l~~~l-~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~  186 (311)
                      +++.+ ...-++.+......++++|+.+.++++++.+  .++||+|+|+|++.++.++ +.+|++++ ...++.+..+..
T Consensus        15 V~~am~~~~~~hr~~~f~~i~~~~~~~l~~ll~~~~~--~i~~~gsgT~a~e~~~~nl-~~~g~~vlv~~~G~f~~~~~~   91 (348)
T d1iuga_          15 ALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGE--VLILTGSGTLAMEALVKNL-FAPGERVLVPVYGKFSERFYE   91 (348)
T ss_dssp             HHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSE--EEEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHH
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCC--EEEEeCchHHHHHHHHHhc-ccccccceeecchHHHHHHHH
Confidence            44444 4445666788888899999999999998643  5899999999999999887 46788764 566666666767


Q ss_pred             HHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHC--CcEEEeccccc
Q 021539          187 FAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRN--AWHVLLDATGL  261 (311)
Q Consensus       187 la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~--g~~vlvDAaQs  261 (311)
                      .+++.|..+..+...+. ..++.+.   ....     ...+|+++|.  ++|+++|+++|.+ ++++  ...+++||+|+
T Consensus        92 ~a~~~~~~~~~~~~~~g-~~~~~~~---~~~~-----~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss  162 (348)
T d1iuga_          92 IALEAGLVVERLDYPYG-DTPRPED---VAKE-----GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTS  162 (348)
T ss_dssp             HHHHTTCEEEEEECCTT-CCCCTTT---SCCS-----SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred             HHHhcCcccccccccCC-Ccccccc---cccc-----CCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhhc
Confidence            78888999988887652 2333321   1112     2568888877  5899999999976 5654  58999999999


Q ss_pred             CccCcccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCCCCcccCCC
Q 021539          262 VFGEDQLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSFDTTSST  309 (311)
Q Consensus       262 v~G~~pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~~p~  309 (311)
                      + |..|+|++.+++|++++++|||+.| |+|+|+++++++.++...|+
T Consensus       163 ~-g~~~i~~d~~~iD~~~~~sqK~l~g-ppG~~~v~~s~~~le~~~~~  208 (348)
T d1iuga_         163 L-LVGEVALEAMGVDAAASGSQKGLMC-PPGLGFVALSPRALERLKPR  208 (348)
T ss_dssp             B-TTBCCCSGGGTCSEEEEESSSTTCC-CSCEEEEEECHHHHHTCCCC
T ss_pred             c-cccccccccccCCEEEeccccceec-CCceeeeeechHHHhhhccc
Confidence            9 9999999999999999999995556 99999999999887765554

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.79  E-value=2.4e-20  Score=171.99  Aligned_cols=172  Identities=10%  Similarity=-0.044  Sum_probs=124.8

Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC-hHHHHHHHHhCCcEEEE
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE-SDYIKGFAAQKESKVIA  197 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~-~~~~~~la~~~G~~V~~  197 (311)
                      ++.......++++|+.|+++||++ ++|.|+|++|+|++++.++.+....+++.+++..+|+ ...+...++..+..++.
T Consensus        41 HRs~~~~~~~~~~r~~l~~l~~~~-~~~~i~~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~  119 (360)
T d1w23a_          41 HRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIA  119 (360)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhccee
Confidence            345566778899999999999996 5678999999999998877766556777776555544 44555556667777766


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ....+ ......+.++....         .+.++++  ++|+++|+++|.+ +|++|++|+|||+|++ |+.++|+++++
T Consensus       120 ~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~tg~~~~~~~i~~~~~~~g~l~ivDavqs~-g~~~id~~~~~  188 (360)
T d1w23a_         120 ASTKA-NSYQSIPDFSEFQL---------NENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDI-LSRPLKVNQFG  188 (360)
T ss_dssp             EECGG-GTSCSCCCGGGCCC---------CTTEEEEEEESEETTTTEECSSCCCCCSSCEEEECTTTT-TSSCCCGGGCS
T ss_pred             ecccc-ccccchhhhhhccc---------ccccceeEecCCccccceeeeeccccceeeEEeeccccc-ccccccccccc
Confidence            55443 11222222222221         2222333  6999999999976 6999999999999999 99999999999


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCcc
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~  305 (311)
                      +||++++.|| +++ | |.|+++.++...+.
T Consensus       189 vd~~~~~~~k-~~~-~-~~~~~~~~~~~~~~  216 (360)
T d1w23a_         189 MIYAGAQKNL-GPS-G-VTVVIVKKDLLNTK  216 (360)
T ss_dssp             EEEEETTTTT-SCT-T-CEEEEEEHHHHCSC
T ss_pred             ceEEeecccc-ccC-C-cceeeEechhhhcc
Confidence            9999999999 654 3 77777776654443

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=2.8e-18  Score=167.24  Aligned_cols=170  Identities=10%  Similarity=-0.041  Sum_probs=126.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCC---CeEEEeCCHHHHHHHHHhcCCC----------CCC--CEEEEccCcChHHHHHHH
Q 021539          124 ISIPEIQARNRALKHCGLSEDE---YLVLFVPNYKEAMLMIGESYPF----------FKG--NYYLTIISEESDYIKGFA  188 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~de---y~VvFTsnaTealnlv~~s~~~----------~~G--d~Ils~~eh~~~~~~~la  188 (311)
                      ++.+..++.+-+|+++|++...   ..=+||+|+|||+++.+.+..+          ..+  ..+++... | .+|..++
T Consensus        91 ~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~-H-~s~~Kaa  168 (450)
T d1pmma_          91 SAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPV-Q-ICWHKFA  168 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSC-C-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEeccc-H-HHHHHHH
Confidence            3445568999999999996422   1248999999999876544211          111  23444433 4 3466677


Q ss_pred             HhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-------HHHCCcEEEeccc
Q 021539          189 AQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-------AHRNAWHVLLDAT  259 (311)
Q Consensus       189 ~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-------a~~~g~~vlvDAa  259 (311)
                      +..|++++.+|++..++++|.++|+++++++     +.+|+.++.  .+|.+.|+++|..       ++++|+++|||||
T Consensus       169 ~~~gi~~~~v~~~~~~~~~d~~~L~~~i~~~-----t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA  243 (450)
T d1pmma_         169 RYWDVELREIPMRPGQLFMDPKRMIEACDEN-----TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAA  243 (450)
T ss_dssp             HHTTCEEEECCCBTTBCSCCHHHHHHHCCTT-----EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECT
T ss_pred             HHcCCCceEeeecCCCCcCcHHHHHHHhhhC-----ceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehh
Confidence            8889999999988657999999999999875     567776655  6999999987743       3568999999999


Q ss_pred             ccCccCcccCCC-------CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          260 GLVFGEDQLALA-------LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       260 Qsv~G~~pldl~-------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |+. +..+++..       ..++|++++|+|||+++ |.|+|+|++|++.
T Consensus       244 ~gG-~~~p~~~~~~~~~~~~~~aDSi~~s~HK~~~~-p~g~g~l~~r~~~  291 (450)
T d1pmma_         244 SGG-FLAPFVAPDIVWDFRLPRVKSISASGHKFGLA-PLGCGWVIWRDEE  291 (450)
T ss_dssp             TGG-GTHHHHCTTCCCSTTSTTEEEEEEETTTTTCC-CSSCEEEEESSGG
T ss_pred             hcc-ceeeeechhhhhhhcccceeEeecChhhccCC-CCCeeEEEecChh
Confidence            987 76665443       34799999999994445 9999999999754

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.73  E-value=1.5e-18  Score=161.00  Aligned_cols=170  Identities=11%  Similarity=0.024  Sum_probs=123.0

Q ss_pred             cchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEE
Q 021539          119 FKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       119 ~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~  197 (311)
                      ++.......++++|+.++++||++ ++|+|+|++|++++.+-++-...+.+|+.++.. .++....+..++++.|..+..
T Consensus        41 HRs~ef~~~~~~~r~~l~~l~~~~-~~~~i~~~~gs~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~  119 (361)
T d2c0ra1          41 HRGAVYEAVHNEAQARLLALLGNP-TGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVA  119 (361)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHTTCC-SSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEE
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEECCCchHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeee
Confidence            445677788899999999999996 567899999998887655544435666766432 222255566777788999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCc
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPD  276 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~D  276 (311)
                      ++.++ ...++.+.+++.+..+      ..+. ..++||.++|+.+|.. +|++|++|+|||+|++ |+.|+|++++++|
T Consensus       120 ~~~~~-~~~~~~~~~~~~~~~~------~~~~-v~~~tg~~~~~~~i~~~~~~~~al~~vDavss~-g~~~id~~~~di~  190 (361)
T d2c0ra1         120 ASSEA-SNYMTLPKLQEIQLQD------NAAY-LHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDI-LSRPFDLNQFGLV  190 (361)
T ss_dssp             EECGG-GTTCSCCCGGGCCCCT------TEEE-EEEESEETTTTEECSSCCCCTTSCEEEECTTTT-TSSCCCGGGCSEE
T ss_pred             ecccc-ccccchhhhhhhcccC------cceE-EEEecccceecceEEEeeccCCceEEEEeeccc-cccccccccceeE
Confidence            98876 4566777776666543      2222 2236999999999865 6999999999999999 9999999886555


Q ss_pred             EEEEccccCcCCCCCceEEEEEeCCC
Q 021539          277 LVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       277 fl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      |  +++|| ++|.| |.+++++..+.
T Consensus       191 ~--~s~~k-~~~~~-~~~~~~~~~~~  212 (361)
T d2c0ra1         191 Y--AGAQK-NLGPS-GVTVVIVREDL  212 (361)
T ss_dssp             E--EETTT-TTCCS-SCEEEEEEGGG
T ss_pred             E--Eeccc-ccccc-cCcEEEEEhHH
Confidence            5  56788 66734 44444444443

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=3.4e-18  Score=155.92  Aligned_cols=177  Identities=6%  Similarity=-0.079  Sum_probs=127.1

Q ss_pred             CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC-hHHHHHHHHhCCcEEE
Q 021539          118 SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE-SDYIKGFAAQKESKVI  196 (311)
Q Consensus       118 s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~-~~~~~~la~~~G~~V~  196 (311)
                      ++.+......++++|+.|+++||++ +++.|+||+|+|++++.++....+.+++.++....+. ...+..++++.|..+.
T Consensus        38 sHRs~ef~~l~~~~r~~l~~l~~~~-~~~~v~~~~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  116 (360)
T d1bjna_          38 SHRGKEFIQVAEEAEKDFRDLLNVP-SNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNV  116 (360)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEE
T ss_pred             CcCCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEECCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccce
Confidence            3446677788899999999999996 4668999999999988776554445566665443333 4455666777787776


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHHHHHCCcEEEecccccCccCcccCCCCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISEAHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      .....+ ++..+.++++..+..+     ++++++++.  +||+.+|+..+. ++.+++.|++||+|++ +..++|+.  +
T Consensus       117 ~~~~~~-~~~~~~~~~~~~~~~~-----~~~v~v~~~~~~t~~~~~~~~i~-~~~~~~~v~vDa~~~~-~~~~vd~~--~  186 (360)
T d1bjna_         117 FDAKVT-VDGLRAVKPMREWQLS-----DNAAYMHYCPNETIDGIAIDETP-DFGADVVVAADFSSTI-LSRPIDVS--R  186 (360)
T ss_dssp             EECEEE-ETTEEEECCGGGCCCC-----SSCSCEEECSEETTTTEECCCCC-CCCTTCCEEEECTTTT-TSSCCCGG--G
T ss_pred             eecccc-CCCcchhhhhhhhccC-----CceeEEEecccccccCcccccee-cccccceeeeeeeccc-cceeeeec--c
Confidence            665543 3344444455555543     345555544  688888886653 3678999999999999 98888875  5


Q ss_pred             CcEEEEccccCcCCCCCceEEEEEeCCCCccc
Q 021539          275 PDLVLCTLDNNTHAQPLKITCLLVRRKSFDTT  306 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~~~~  306 (311)
                      +|++++|+|| ++|.|.|.|++++++...+..
T Consensus       187 ~dv~~~ss~k-~~~~~~~~~~~~~~~~~~~~~  217 (360)
T d1bjna_         187 YGVIYAGAQK-NIGPAGLTIVIVREDLLGKAN  217 (360)
T ss_dssp             CSEEEEETTT-TTSSTTCEEEEEEGGGCSCCC
T ss_pred             ceeEEEEccc-ccccCCCceeEeeehhhhhcc
Confidence            8999999999 555588999999888776553

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.58  E-value=1.5e-14  Score=133.87  Aligned_cols=162  Identities=9%  Similarity=-0.013  Sum_probs=121.4

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHHHHHhCCcEEEEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKGFAAQKESKVIAA  198 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~v  198 (311)
                      .|...    ++..+++|+++|+.  .  +++|+|+|.|+++++.++.+++||+|+ +...|.+. +.. ....|.+.+++
T Consensus        29 ~G~~v----~~~E~~la~~~g~~--~--ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~~~~-~~a-i~~~g~~pv~~   98 (376)
T d1mdoa_          29 TGPKN----QELEAAFCRLTGNQ--Y--AVAVSSATAGMHIALMALGIGEGDEVITPSMTWVST-LNM-IVLLGANPVMV   98 (376)
T ss_dssp             SSHHH----HHHHHHHHHHHCCS--E--EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHH-HHH-HHHTTCEEEEE
T ss_pred             CCHHH----HHHHHHHHHHHCcC--e--EEEeCCHHHHHHHHHHHhCCCCCCEEEEeccccccc-ccc-hhccccceeee
Confidence            36554    35678899999983  2  889999999999999999889999986 55665532 222 23458999999


Q ss_pred             eCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc--cCCCCCCC
Q 021539          199 PETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ--LALALHRP  275 (311)
Q Consensus       199 p~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~l~~  275 (311)
                      +++.+++.+++++|+++++++     |+.|.++| ..|...|+++|.+ |+++|+.++.||+|++ |..-  ..+...+.
T Consensus        99 d~~~~~~~~d~~~l~~~i~~~-----tkaIi~~h-~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~-g~~~~~~~~g~~g~  171 (376)
T d1mdoa_          99 DVDRDTLMVTPEHIEAAITPQ-----TKAIIPVH-YAGAPADLDAIYALGERYGIPVIEDAAHAT-GTSYKGRHIGARGT  171 (376)
T ss_dssp             CBCTTTCCBCHHHHHHHCCTT-----EEEECCBC-GGGCCCCHHHHHHHHHHHTCCBCEECTTCT-TCEETTEETTSSSE
T ss_pred             cccccccCCCHHHHHHhcCCC-----CeEEEEeC-CCCCccchhHHHHHHHhcCceEEeccchhc-cCeeCCeecccccC
Confidence            988767889999999999875     56665554 4899999999966 6999999999999999 8543  33444566


Q ss_pred             cEEEEccccCcCCCCCceEEEEEeC
Q 021539          276 DLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       276 Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      .+++|..+| .++.+. -|+++.+.
T Consensus       172 ~~~Sf~~~K-~l~~g~-GG~i~t~~  194 (376)
T d1mdoa_         172 AIFSFHAIK-NITCAE-GGIVVTDN  194 (376)
T ss_dssp             EEEECCTTS-SSCSSS-CEEEEESC
T ss_pred             ccccCCCcC-CCCCCC-CCEEEEec
Confidence            667777789 665343 35555554

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.57  E-value=4.6e-15  Score=142.32  Aligned_cols=168  Identities=11%  Similarity=0.003  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChH--HHHHHHHhCCcEEEEEeCCC
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESD--YIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~--~~~~la~~~G~~V~~vp~~~  202 (311)
                      ..+.++++.+|+++|++  +  .+|+.|+|++.|+++.....++||.|+ +..+|.+.  .++.+ ...+..+...+++.
T Consensus        66 ~~i~eae~~~A~~~ga~--~--a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l-~~~~~~~~~~~~~~  140 (462)
T d1c4ka2          66 GPAVAAEKHAARVYNAD--K--TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAM-AGGRPVYLQTNRNP  140 (462)
T ss_dssp             THHHHHHHHHHHHTTCS--E--EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTT-TCCEEEEECEEECT
T ss_pred             HHHHHHHHHHHHHhCCC--e--EEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHH-hcCCceeeeccccc
Confidence            34678999999999983  3  889888888777654433357999987 45566532  22222 22234444445543


Q ss_pred             CCc--------ccCHHHHHhhhhc-----cCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc
Q 021539          203 LDL--------RIKGSQLSQNFRR-----KCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED  266 (311)
Q Consensus       203 ~~g--------~id~~~L~~~l~~-----~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~  266 (311)
                       .+        .++.+.+++.+..     ... ..+.++++.+.  ..|.+.|+++|.+ ||++|+++++|++|++ |..
T Consensus       141 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~-~~~  217 (462)
T d1c4ka2         141 -YGFIGGIYDSDFDEKKIRELAAKVDPERAKW-KRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVG-YEQ  217 (462)
T ss_dssp             -TCCEEEECGGGSCHHHHHHHTTTSSHHHHTC-SCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCC-GGG
T ss_pred             -ccccCCCChHHhhHHHHHhhhhhhcHHhhhc-cCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhc-ccc
Confidence             22        2333333332211     011 11344444433  6899999999976 7999999999999999 877


Q ss_pred             ccCCC-------------CCCCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          267 QLALA-------------LHRPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       267 pldl~-------------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ..+..             ..++|++++|+|| ++|.|.|.+++.+++..
T Consensus       218 ~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK-~lg~~~~g~ll~~~~~~  265 (462)
T d1c4ka2         218 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHK-QQAGFSQTSQIHKKDSH  265 (462)
T ss_dssp             SSGGGGGGCTTSCCCCCTTSCEEEEEECHHH-HSSCCTTCEEEEEECGG
T ss_pred             ccCcCCcchhhccccccccCCccEEEEecCc-ccccccceEEEEecccc
Confidence            66542             1246999999999 88856565555555543

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=5.7e-15  Score=140.40  Aligned_cols=169  Identities=11%  Similarity=0.024  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-cCC--CCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEe--
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE-SYP--FFKGNYYL-TIISEESDYIKGFAAQKESKVIAAP--  199 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~-s~~--~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp--  199 (311)
                      ....+.-+.+++++|.+.. ...+||+++|++.++++. +..  ..+++.|+ +...|.+ ..+ .+...|.+.+.|+  
T Consensus        94 ~le~~~~~~~~~l~g~~~~-~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s-~~~-a~~~~g~~~~~v~~~  170 (445)
T d3bc8a1          94 KITNSLVLNVIKLAGVHSV-ASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKS-CFK-SMVTAGFEPVVIENV  170 (445)
T ss_dssp             HHHHHHHHHHHHHHTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHH-HHH-HHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHhCCCcc-cCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHH-HHH-HHHHcCCeeEEEEee
Confidence            3444677788999999753 468899999986554332 221  12456765 5555543 222 2344588776664  


Q ss_pred             -CCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCc------ccC
Q 021539          200 -ETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED------QLA  269 (311)
Q Consensus       200 -~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~------pld  269 (311)
                       .+ +++.+|.++|++.+.+... ..+.+|++++.  .+|.+.|+++|++ ||++|+++|+|+|++. +..      +.+
T Consensus       171 ~~~-~~~~id~~~l~~~i~~~~~-~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~-~~~~~~~~~~~~  247 (445)
T d3bc8a1         171 LEG-DELRTDLKAVEAKIQELGP-EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGL-QSSKCMHLIQQG  247 (445)
T ss_dssp             EET-TEEECCHHHHHHHHHHHCG-GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTT-TCHHHHHHHHHH
T ss_pred             ccC-cccccCHHHHHHHHHhccc-cCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchh-hhhhccccchhc
Confidence             33 3689999999999975321 12455555544  4899999999977 6999999999999987 632      223


Q ss_pred             CCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      ....++|++++|+|| ++++|.|.|++++++.
T Consensus       248 ~~~~~vd~~~~s~hK-~~~~p~g~~~l~~~~~  278 (445)
T d3bc8a1         248 ARVGRIDAFVQSLDK-NFMVPVGGAIIAGFNE  278 (445)
T ss_dssp             HHHSCCCEEEEEHHH-HHSCCSSCEEEEESCH
T ss_pred             cCcCCcceEEecCcc-ccccCCCCceeeeCCh
Confidence            333469999999999 5555999999999864

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.47  E-value=2.9e-13  Score=132.36  Aligned_cols=191  Identities=14%  Similarity=0.014  Sum_probs=125.2

Q ss_pred             cchhHHHHh---cCCC--Ccc-hhhhhHHHHHHHHHHHHHcCCCCC-------CCeEEEeCCHHHHHHHHHhcC------
Q 021539          105 EPSRLLDIL---SKKT--SFK-GNFISIPEIQARNRALKHCGLSED-------EYLVLFVPNYKEAMLMIGESY------  165 (311)
Q Consensus       105 ~~~~l~~~l---~~~s--s~~-G~~~~~~le~aR~~IA~~Lga~~d-------ey~VvFTsnaTealnlv~~s~------  165 (311)
                      .+.-+-+++   .|++  ++. +..++..+.++=+-+++++|.+.+       +-.-+||+|+|+|+-+.+..-      
T Consensus        86 ~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~  165 (476)
T d1js3a_          86 YPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (476)
T ss_dssp             HHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHH
Confidence            444455554   3443  333 334444555788899999999632       224689999999976543211      


Q ss_pred             -------CCCCC----CE-EE-EccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCC-ceEEEEe
Q 021539          166 -------PFFKG----NY-YL-TIISEESDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTP-KGLFSYP  231 (311)
Q Consensus       166 -------~~~~G----d~-Il-s~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~-t~LVs~~  231 (311)
                             .+..+    +- ++ +...|.+  +...+.-.|..+..+|++. ++++|.+.|++.+++...... ..+|+.+
T Consensus       166 ~~~~~~~g~~~~~~~~~~vv~~s~~~H~S--i~ka~~~lGl~~~~v~~d~-~~~md~~~L~~~i~~~~~~g~~p~~Vvat  242 (476)
T d1js3a_         166 RLQAASPGLTQGAVLEKLVAYASDQAHSS--VERAGLIGGVKLKAIPSDG-KFAMRASALQEALERDKAAGLIPFFVVAT  242 (476)
T ss_dssp             HHHHHSTTCCHHHHHHHEEEEEETTCCHH--HHHHHHHHTCEEEEECCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hhcccccCcccccccCceEEEecccccHH--HHHHHHhcCceEEEeccCC-CCCcCHHHHHHHHHHHHhcCCCcEEEeec
Confidence                   01110    11 33 4444442  3333444588899999986 789999999999986432111 1233333


Q ss_pred             c-c-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC-----CC-CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          232 V-V-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL-----AL-HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       232 ~-~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl-----~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      + . .+|.+-|+++|++ |+++|+++||||++.. .....+-     .. ..+|.+++++|| |++.|.++|++++|+
T Consensus       243 aGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg-~~~~~~~~~~~~~gi~~aDSit~d~HK-~l~~P~~~g~~l~r~  318 (476)
T d1js3a_         243 LGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAG-SAFICPEFRHLLNGVEFADSFNFNPHK-WLLVNFDCSAMWVKR  318 (476)
T ss_dssp             BSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGG-GGGGSTTTGGGGTTGGGCSEEEECHHH-HSSCCSSCEEEEESC
T ss_pred             CCCccceeeccHHHHHHHHHhcCcEEEEecccch-hhhhhcchhhhhcCCcccceeeecCcc-ccccCCcceeecccc
Confidence            3 2 6999999999977 6999999999999865 4333331     11 258999999999 555599999999996

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.33  E-value=1.7e-12  Score=123.10  Aligned_cols=168  Identities=9%  Similarity=0.028  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-HHHHHHhcCC-CCCCCEEE-EccCcChHHHHHHHHhCCcEEEEEeC--C
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKE-AMLMIGESYP-FFKGNYYL-TIISEESDYIKGFAAQKESKVIAAPE--T  201 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTe-alnlv~~s~~-~~~Gd~Il-s~~eh~~~~~~~la~~~G~~V~~vp~--~  201 (311)
                      ...+.-..+++++|.+..   ..++.++|. ++.+++.+.. ..+++.|+ +...|.+ ..+ .+...|.+...++.  +
T Consensus       114 ~~~~~~~~~~~~~g~~~~---~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s-~~k-~~~~~g~~~~~v~~~~~  188 (434)
T d2z67a1         114 LTNKILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKS-PIK-AVSFVGMNMRLVETVLD  188 (434)
T ss_dssp             HHHHHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH-HHH-HHHHTTCEEEEECCEEE
T ss_pred             HHHHHHHHHHHhcCCCcc---eeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHH-HHH-HHHHhCCcceEEEeecC
Confidence            334555667888988532   555554444 4444443321 12567765 5555553 222 23445777776653  2


Q ss_pred             CCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccC-----cccCCCCC
Q 021539          202 WLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGE-----DQLALALH  273 (311)
Q Consensus       202 ~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~-----~pldl~~l  273 (311)
                      ...+.+|.++|++.+++......+.+|.++..  ..|.+.|+++|.+ ||++|+++|+|++++. +.     .+......
T Consensus       189 ~~~~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~-~~~~~~~~~~~~~~~  267 (434)
T d2z67a1         189 GDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAI-QNNYYLEKLKKAFKY  267 (434)
T ss_dssp             TTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTT-TCHHHHHHHHHHHTS
T ss_pred             CCccCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchh-hhhhccccccccccC
Confidence            23578999999999975321112455555543  3799999999976 6999999999999976 43     23334457


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      ++|++++|+|| ++|.|.|.|+++++++
T Consensus       268 ~~D~~~~s~hK-~l~~~~g~~~~~~~~~  294 (434)
T d2z67a1         268 RVDAVVSSSDK-NLLTPIGGGLVYSTDA  294 (434)
T ss_dssp             CCSEEEEEHHH-HHCCCSSCEEEEESCH
T ss_pred             CcceEEEcCcc-ccccCCCccccccCcH
Confidence            89999999999 6555999999998864

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.18  E-value=2.2e-11  Score=107.13  Aligned_cols=159  Identities=9%  Similarity=-0.053  Sum_probs=100.9

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH-HHHHHHhCCcEEEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY-IKGFAAQKESKVIA  197 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~-~~~la~~~G~~V~~  197 (311)
                      .|.......+++|+.+|+++|++ .  .|+||+|+|+|++.++.... ..++.++ ....|.+.. ...+....+..+..
T Consensus        32 ~~~~~~~~~~~l~~~la~~~g~~-~--~v~f~~sGt~An~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (345)
T d1v72a1          32 GPYGTDELTAQVKRKFCEIFERD-V--EVFLVPTGTAANALCLSAMT-PPWGNIYCHPASHINNDECGAPEFFSNGAKLM  107 (345)
T ss_dssp             CSTTCSHHHHHHHHHHHHHHTSC-C--EEEEESCHHHHHHHHHHTSC-CTTEEEEECTTSHHHHSSTTHHHHHTTSCEEE
T ss_pred             cccCCCHHHHHHHHHHHHHHCCC-c--EEEECCchHHHHHHHHHHHH-hcCCccccccccceeeechhhHHHhcCccccc
Confidence            44456677789999999999984 2  49999999999999888763 4445544 333333211 11223345667777


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCC-CCc--eEEEEecc-ccc---chhcHHHHHH-HHHCCcEEEecccccCccCcccC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKY-TPK--GLFSYPVV-VNG---TRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA  269 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~-~~t--~LVs~~~~-~tG---~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld  269 (311)
                      ++... ++.++.+.++..+...... ..+  .++.+... ..|   .+.++.++.+ ++++|+.+++|++|.. +....+
T Consensus       108 ~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~-~~~~~~  185 (345)
T d1v72a1         108 TVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFA-NALVSL  185 (345)
T ss_dssp             ECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHH-HHHHHH
T ss_pred             ccccc-cccccHHHhhhhhcccccccccccceeeeeeccccccccccchhhhhHHHHHHhcCceeeecccccc-eecccc
Confidence            77665 6788999999888754321 111  22333322 334   4455556654 6999999999999986 544443


Q ss_pred             CCC-------CCCcEEEEcccc
Q 021539          270 LAL-------HRPDLVLCTLDN  284 (311)
Q Consensus       270 l~~-------l~~Dfl~~S~HK  284 (311)
                      ...       ...+.++++.+|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~  207 (345)
T d1v72a1         186 GCSPAEMTWKAGVDALSFGATK  207 (345)
T ss_dssp             TCCTTTTTGGGTCCEEEECCGG
T ss_pred             ccCHHHhhccccccccccCccc
Confidence            322       235667777777

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.14  E-value=3.2e-10  Score=104.43  Aligned_cols=181  Identities=9%  Similarity=-0.015  Sum_probs=119.2

Q ss_pred             hHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHHHH
Q 021539          108 RLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYIKG  186 (311)
Q Consensus       108 ~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~~~  186 (311)
                      ++.+.+.+..+|+...-   ..+.|+.||+++++++++  |+||+|+|+++++++..+. .+|+.|+ ....++..  ..
T Consensus        46 al~~~l~~~~~Y~~~~G---~~elr~aiA~~~~~~~~~--Iiit~G~~~al~~~~~~l~-~~~d~v~~~~p~~~~~--~~  117 (368)
T d1v2da_          46 AVRRALGRQDQYAPPAG---LPALREALAEEFAVEPES--VVVTSGATEALYVLLQSLV-GPGDEVVVLEPFFDVY--LP  117 (368)
T ss_dssp             HHHHHTTTSCSCCCTTC---CHHHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTTH--HH
T ss_pred             HHHHHhhcccCCCCCcC---CHHHHHHHHhhcccCCcc--eeeccchHHHHHHHhhccc-cccccccccCCcchhh--hh
Confidence            45555555566653321   237899999999998765  9999999999999999874 5778875 33344321  12


Q ss_pred             HHHhCCcEEEEEeCCC--CCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHH---HHH-HHHCCcEEEecc
Q 021539          187 FAAQKESKVIAAPETW--LDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHW---ISE-AHRNAWHVLLDA  258 (311)
Q Consensus       187 la~~~G~~V~~vp~~~--~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~---I~~-a~~~g~~vlvDA  258 (311)
                      .++..|.++..++.+.  ....+|.++++++++++     ++++.++  ++-||++++.++   |.+ |+++|+++++|.
T Consensus       118 ~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~  192 (368)
T d1v2da_         118 DAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR-----TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDE  192 (368)
T ss_dssp             HHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHhcCCccceeccccccccccCCHHHHHHhhccC-----ceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeech
Confidence            2344588887776532  24568999999988765     4555543  336999998555   444 589999999999


Q ss_pred             cccCccCcccCCCC-----CCCcEEEEccccCcCCCCC-ceEEEEEeCCCC
Q 021539          259 TGLVFGEDQLALAL-----HRPDLVLCTLDNNTHAQPL-KITCLLVRRKSF  303 (311)
Q Consensus       259 aQsv~G~~pldl~~-----l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~~  303 (311)
                      +... ....-+...     .....++.|.-| .+|.|- .+|+++..++..
T Consensus       193 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~sk-~~~~~G~R~g~~~~~~~~~  241 (368)
T d1v2da_         193 VYDE-LYYGERPRRLREFAPERTFTVGSAGK-RLEATGYRVGWIVGPKEFM  241 (368)
T ss_dssp             TTTT-CBSSSCCCCHHHHCTTTEEEEEEHHH-HTTCGGGCCEEEECCTTTH
T ss_pred             hhhh-hcccccccccccccccccceeecccc-ccccccccccccccccccc
Confidence            8875 333332211     234455566666 565441 378887776654

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.13  E-value=4.2e-10  Score=105.66  Aligned_cols=174  Identities=10%  Similarity=0.045  Sum_probs=121.5

Q ss_pred             hHHHHhcCCC--CcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHHH
Q 021539          108 RLLDILSKKT--SFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDYI  184 (311)
Q Consensus       108 ~l~~~l~~~s--s~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~~  184 (311)
                      .+.+.|....  ...|..+.    +-.+++|+++|+.  .  +++|+|+|.|+.+++.++.+++||+|+ +...+.+. .
T Consensus        18 ~~~~~l~~g~~~~~~g~~v~----~fE~~~a~~~g~~--~--~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t~~a~-~   88 (384)
T d1b9ha_          18 GLVRALEQGQWWRMGGDEVN----SFEREFAAHHGAA--H--ALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISS-S   88 (384)
T ss_dssp             HHHHHHHTSCCBTTTCSHHH----HHHHHHHHHTTCS--E--EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHH-H
T ss_pred             HHHHHHHcCCeeecCCHHHH----HHHHHHHHHHCcC--e--EEEeCCHHHHHHHHHHHcCCCCCCEEEEeccccccc-c
Confidence            4566665442  33466554    5667899999994  2  899999999999999999889999986 44544422 2


Q ss_pred             HHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCc
Q 021539          185 KGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVF  263 (311)
Q Consensus       185 ~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~  263 (311)
                      . .....|.++++++++..+..++++.+++.+.++     ++.|.+.+ ..|...++++|.+ |+++++.++.|++|+. 
T Consensus        89 ~-ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~-----tk~i~~~~-~~g~~~d~~~i~~~~~~~~i~lieD~a~a~-  160 (384)
T d1b9ha_          89 Q-AAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR-----TKVIMPVH-MAGLMADMDALAKISADTGVPLLQDAAHAH-  160 (384)
T ss_dssp             H-HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT-----EEEECCBC-GGGCCCCHHHHHHHHHHHTCCBCEECTTCT-
T ss_pred             c-cccccccccccccccccccccchhhhccccccc-----cccccccc-ccccccccccchhhhhhhhhhhhhhhceec-
Confidence            2 233469999999987667889999999988765     45654333 4899999999966 6899999999999999 


Q ss_pred             cCcccC--CCC-CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          264 GEDQLA--LAL-HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       264 G~~pld--l~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      |..--.  +.. -.+.+++|+..| .++.. +-|+++.++
T Consensus       161 ga~~~g~~~g~~g~~~~~Sf~~~K-~i~~g-~GG~i~t~~  198 (384)
T d1b9ha_         161 GARWQGKRVGELDSIATFSFQNGK-LMTAG-EGGAVVFPD  198 (384)
T ss_dssp             TCEETTEEGGGSSSCEEEECCTTS-SSCSS-SCEEEEECT
T ss_pred             ccccCCEecCcccccceecccccc-ccccc-ccchhhhhh
Confidence            864211  111 134555566688 55532 234455543

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.06  E-value=2.3e-10  Score=106.76  Aligned_cols=155  Identities=14%  Similarity=0.028  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-Ec--cCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          129 IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TI--ISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       129 e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~--~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ++.|+..++.++.++.+ +++.|+|+++|+..++.++  .+|+.++ ..  ..|.+  +...++..|+++  ++.+    
T Consensus        53 ~~l~~~~~~~~~~~~~e-~~~~~~~~~~a~~~~l~al--~~~~~vi~~~~~~~~~~--~~~~~~l~g~~~--v~~~----  121 (366)
T d2aeua1          53 EKVNEYGLKHLGGDEND-KCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPS--IERSCKIVNAKY--FESD----  121 (366)
T ss_dssp             HHHHHHHHHHHTCCTTE-EEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTH--HHHHHHHTTCEE--EEES----
T ss_pred             HHHHHHHHHHccCCCcc-EEEEeCCHHHHHHHHHHHh--CCCCEEEEecCCCcchh--HHHHHHhcCCeE--ECCC----
Confidence            46778889999987654 6999999999998888775  3566653 22  23442  222334457664  3332    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEec--c-cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC----CCCCcE
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPV--V-VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA----LHRPDL  277 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~--~-~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~~Df  277 (311)
                        ++++|++.++++     |+++.+..  + .++.+.++++|.+ ||++|+++++|.+++. +....+..    ..++|+
T Consensus       122 --d~e~l~~~i~~~-----tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~-~~~~~~~~~~~~~~~~di  193 (366)
T d2aeua1         122 --KVGEILNKIDKD-----TLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGA-RVRLLFNQPPALKLGADL  193 (366)
T ss_dssp             --CHHHHHTTCCTT-----EEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHH-HHHHHTTCCCHHHHTCSE
T ss_pred             --CHHHHHHhcCCC-----ceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccc-cccccccCCCHhhcCceE
Confidence              578899998875     56766543  3 3567888999976 6999999999999986 53322221    357999


Q ss_pred             EEEccccCcCCCCCceEEEEEeCCCCc
Q 021539          278 VLCTLDNNTHAQPLKITCLLVRRKSFD  304 (311)
Q Consensus       278 l~~S~HK~l~G~P~GiG~L~vr~~~~~  304 (311)
                      +++|+|| .+|+| ++|+++.++++++
T Consensus       194 ~~~S~sK-~~~g~-~~G~i~~~~~~i~  218 (366)
T d2aeua1         194 VVTSTDK-LMEGP-RGGLLAGKKELVD  218 (366)
T ss_dssp             EEEETTS-SSSSC-SCEEEEEEHHHHH
T ss_pred             EEecccc-ccccc-ceeEEEecHHHHH
Confidence            9999999 66646 7899998876543

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=98.99  E-value=1.7e-09  Score=104.35  Aligned_cols=176  Identities=11%  Similarity=0.061  Sum_probs=113.9

Q ss_pred             HHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHh
Q 021539          111 DILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQ  190 (311)
Q Consensus       111 ~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~  190 (311)
                      .+...-.+|.|.....   +-.+.+|+++|..  .  ++||+++|.|+.++...+ .++|+.|++.. |..... .-...
T Consensus        63 a~~~GDd~Y~~dpt~~---~lE~~~a~l~G~e--~--al~~~SGt~An~~a~~~l-~~~Gd~Vi~~~-~f~~~~-~~i~~  132 (456)
T d1c7ga_          63 GMMIGDEAYAGSENFY---HLEKTVKELFGFK--H--IVPTHQGRGAENLLSQLA-IKPGQYVAGNM-YFTTTR-FHQEK  132 (456)
T ss_dssp             HTTSCCCCSSSCHHHH---HHHHHHHHHHCCS--E--EEEESSHHHHHHHHHHHH-CCTTEEEEESS-CCHHHH-HHHHH
T ss_pred             HHhccchhccCCchHH---HHHHHHHHHhCCC--e--EEECCCHHHHHHHHHHHh-cCCCCeEecCc-chHHHH-HHHHH
Confidence            3445556787766554   4556789999984  2  899999999999988887 57899988653 221111 11223


Q ss_pred             CCcEEEEEeCC---------CCCcccCHHHHHhhhhccCCCCCceEEEEe--cc-cccchhcHHH---HHH-HHHCCcEE
Q 021539          191 KESKVIAAPET---------WLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VV-VNGTRYSMHW---ISE-AHRNAWHV  254 (311)
Q Consensus       191 ~G~~V~~vp~~---------~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~-~tG~i~Pi~~---I~~-a~~~g~~v  254 (311)
                      .|+....+..+         ...+.+|.++|+++++++.+. .+.++++.  ++ .-|...|++.   |.+ |+++|+.+
T Consensus       133 ~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~-~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~  211 (456)
T d1c7ga_         133 NGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAE-NIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKI  211 (456)
T ss_dssp             TTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGG-GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCE
T ss_pred             cCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCc-cceeEEeeecccccccceecHHHHHHHHHHHHHcCCEE
Confidence            46665544321         124678999999999875321 24566654  33 2577766654   444 68999999


Q ss_pred             EecccccCccCcc-----------cCCCC------CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          255 LLDATGLVFGEDQ-----------LALAL------HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       255 lvDAaQsv~G~~p-----------ldl~~------l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      |+|+++++ |...           .++.+      ..+|.+++|+|| .+|+|.| |+++.++
T Consensus       212 ~~D~a~~~-~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K-~~~~~~G-G~i~~~~  271 (456)
T d1c7ga_         212 FYDATRCV-ENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKK-DCLVNIG-GFLCMND  271 (456)
T ss_dssp             EEECTTHH-HHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTT-TTCCSSC-EEEEESC
T ss_pred             EEEcchhh-cchhhhcccccccCCCChhhhccccccccccEEEeccc-cccccce-eEEEcCC
Confidence            99999986 5321           11110      137999999999 7765543 5555554

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=98.98  E-value=9.2e-09  Score=94.93  Aligned_cols=174  Identities=11%  Similarity=0.022  Sum_probs=113.5

Q ss_pred             cchhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcCh-
Q 021539          105 EPSRLLDILSKK-TSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEES-  181 (311)
Q Consensus       105 ~~~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~-  181 (311)
                      |-+.+.+.+... -+-.|....    +-.+.+++++|..  .  +++|+|+|.|+.+++.++.+++||+|+ +...+.+ 
T Consensus         3 e~~~~~~~l~~~~~~~~G~~~~----~fE~~~~~~~~~~--~--~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~   74 (374)
T d1o69a_           3 ELKYIEEVFKSNYIAPLGEFVN----RFEQSVKDYSKSE--N--ALALNSATAALHLALRVAGVKQDDIVLASSFTFIAS   74 (374)
T ss_dssp             HHHHHHHHHHHTTTSCTTHHHH----HHHHHHHHHHCCS--E--EEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGG
T ss_pred             HHHHHHHHHhcCCcCCCCHHHH----HHHHHHHHHHCcC--e--EEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhh
Confidence            345566666433 121366654    5667789999984  2  899999999999999999999999985 5555442 


Q ss_pred             -HHHHHHHHhCCcEEEEEeCCCCCcccCHHHH--HhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEec
Q 021539          182 -DYIKGFAAQKESKVIAAPETWLDLRIKGSQL--SQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       182 -~~~~~la~~~G~~V~~vp~~~~~g~id~~~L--~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                       +++    ...|++.+++.++......+.+..  ......+     ++.+.+.+ ..|...++++|.+ |+++|+.++-|
T Consensus        75 ~~~~----~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~~-----~~aii~~~-~~G~~~d~~~i~~~~~~~~i~vIED  144 (374)
T d1o69a_          75 VAPI----CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKK-----PKALILTH-LYGNAAKMDEIVEICKENDIVLIED  144 (374)
T ss_dssp             THHH----HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSC-----CCEEEEEC-GGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHH----hhccceeEecccccccccccccccccchhcccc-----cccccccc-cccchhhhHHHHHHhhccCcchhhh
Confidence             233    235999999988742222222222  2232222     34444333 4799999999965 79999999999


Q ss_pred             ccccCccCcccC--CCCCCCcEEEEccc--cCcCCCCCceEEEEEeC
Q 021539          258 ATGLVFGEDQLA--LALHRPDLVLCTLD--NNTHAQPLKITCLLVRR  300 (311)
Q Consensus       258 AaQsv~G~~pld--l~~l~~Dfl~~S~H--K~l~G~P~GiG~L~vr~  300 (311)
                      |||++ |..--.  +.. --|+-+||+|  | .++.- |-|+++.++
T Consensus       145 ~a~a~-g~~~~~~~~G~-~gd~~~fSf~~~K-~l~tg-eGG~i~tnn  187 (374)
T d1o69a_         145 AAEAL-GSFYKNKALGT-FGEFGVYSYNGNK-IITTS-GGGMLIGKN  187 (374)
T ss_dssp             CTTCT-TCEETTEETTS-SSSEEEEECCTTS-SSCCS-SCEEEEESC
T ss_pred             hhhhh-cceECCeecCC-CCceEEEeccCcc-ccccc-cceeehhhh
Confidence            99999 854221  111 2499999998  7 55422 446666543

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.97  E-value=1.4e-09  Score=105.89  Aligned_cols=171  Identities=14%  Similarity=-0.002  Sum_probs=118.2

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeE-EEeCCHHHHHHHHHhcCCCCCCCEEEEcc----CcChHHH-----HHHHH
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLV-LFVPNYKEAMLMIGESYPFFKGNYYLTII----SEESDYI-----KGFAA  189 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~V-vFTsnaTealnlv~~s~~~~~Gd~Ils~~----eh~~~~~-----~~la~  189 (311)
                      |-.....+ .-|.+++.++||++++.--+ |=.-+++.|+..+..++ .++||.|++..    +|-+...     ..-..
T Consensus        71 G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs~An~av~~al-l~pgD~im~~~l~~GGHlshg~~~~~~~~~~~  149 (470)
T d1rv3a_          71 GTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTAL-VEPHGRIMGLDLPDGGHLTHGFMTDKKKISAT  149 (470)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-TCTTCEEEEECGGGTCCGGGCCBCSSCBCSHH
T ss_pred             CchhHHHHHHHHHHHHHHHhCCChhhccccccccCCccHHHHHHHHh-cCCCCeEeeeccccCCcccccccccCCCcccc
Confidence            44444444 46999999999997543112 22348888988888887 58999997432    2322110     00011


Q ss_pred             hCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCc--
Q 021539          190 QKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGED--  266 (311)
Q Consensus       190 ~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~--  266 (311)
                      .+.+++...+++.+++.||.+++++..++.    +.+|+.+.....-...|++++++ |.+.|+++++|++|.+ |.+  
T Consensus       150 ~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~----kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~a-GLIA~  224 (470)
T d1rv3a_         150 SIFFESMAYKVNPDTGYIDYDRLEENARLF----HPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHIS-GLVVA  224 (470)
T ss_dssp             HHHSEEEEECBCTTTCSBCHHHHHHHHHHH----CCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTH-HHHHH
T ss_pred             cceeEeeEEEEecccCcccHHHHHHHHHhh----CcceEeechhhccccCCHHHHHHHHhccCCeEEecchhhh-hhccc
Confidence            123567778888767899999999887753    24688776555677889999987 5899999999999986 643  


Q ss_pred             ---ccCCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          267 ---QLALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       267 ---pldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                         |=.+.  .+|+++.|.||++.| |+| |+++.+++
T Consensus       225 g~~~sPl~--~aDvvt~tTHKtlrG-Prg-GiI~~~~~  258 (470)
T d1rv3a_         225 GVVPSPFE--HCHVVTTTTHKTLRG-CRA-GMIFYRRG  258 (470)
T ss_dssp             TSSCCGGG--TCSEEEEESSGGGCC-CSC-EEEEEECS
T ss_pred             cccCChhh--eeeeeeeehhhhccC-Ccc-eEEEEccc
Confidence               33443  369999999995556 987 77776654

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=98.95  E-value=6.4e-09  Score=89.37  Aligned_cols=158  Identities=12%  Similarity=0.028  Sum_probs=92.8

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEE-EccCcChHH-HHHHHHhCCcEEEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYL-TIISEESDY-IKGFAAQKESKVIA  197 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Il-s~~eh~~~~-~~~la~~~G~~V~~  197 (311)
                      .|.......+++|++||+++|++++  +|+||+|+|||+++++.++. .+++.++ ....|.+.. ...........+..
T Consensus        29 ~~y~~~~~~~~lr~~ia~~~g~~~~--~v~~tsggtean~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (340)
T d1svva_          29 AGYGQDSHCAKAARLIGELLERPDA--DVHFISGGTQTNLIACSLAL-RPWEAVIATQLGHISTHETGAIEATGHKVVTA  105 (340)
T ss_dssp             CSTTCSHHHHHHHHHHHHHHTCTTS--EEEEESCHHHHHHHHHHHHC-CTTEEEEEETTSHHHHSSTTHHHHTTCCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHhCCCcc--eEEEcCCHHHHHHHHHHHHh-hhccccccccccceeeeecccccccceeeeec
Confidence            3444556678999999999999765  49999999999999988763 4555554 333332211 11112222333333


Q ss_pred             EeCCCCCcccCHHHHHhhhhcc-CCCCCce-EEEEecc-cccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRK-CKYTPKG-LFSYPVV-VNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLAL  270 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~-~~~~~t~-LVs~~~~-~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl  270 (311)
                      .+...   ....+...+..... .....+. ++.++.. ..|.+.+.+.+   .. ++++|..+++|+++.. +..+.+.
T Consensus       106 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~a~~~-~~~~~~~  181 (340)
T d1svva_         106 PCPDG---KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLA-SALSSPV  181 (340)
T ss_dssp             CCTTS---CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHH-HHHTSTT
T ss_pred             ccccc---cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccccccceeeeecccee-eeecccc
Confidence            33321   22333332222211 1111223 3444433 56777666554   33 5789999999999987 7666665


Q ss_pred             CCC-------CCcEEEEcccc
Q 021539          271 ALH-------RPDLVLCTLDN  284 (311)
Q Consensus       271 ~~l-------~~Dfl~~S~HK  284 (311)
                      ...       ..+...+++.|
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~  202 (340)
T d1svva_         182 NDLTLADIARLTDMFYIGATK  202 (340)
T ss_dssp             CCCCHHHHHHHCSEEEEECTT
T ss_pred             cccccccccccceeeecCCcc
Confidence            443       25777788888

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=98.94  E-value=1.3e-08  Score=94.13  Aligned_cols=175  Identities=12%  Similarity=0.082  Sum_probs=114.8

Q ss_pred             cchhHHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCC--EEE-EccCcCh
Q 021539          105 EPSRLLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGN--YYL-TIISEES  181 (311)
Q Consensus       105 ~~~~l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd--~Il-s~~eh~~  181 (311)
                      +-..+.+.+...--..|..+.    +-.+.+++++|+.  .  +++|+|+|.|+.+++.++....|+  +|+ +.....+
T Consensus        14 ~~~~v~~~l~~~~~~~G~~v~----~fE~~~~~~~g~k--~--ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t~~a   85 (371)
T d2fnua1          14 DKKAVLEVLNSKQLTQGKRSL----LFEEALCEFLGVK--H--ALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVA   85 (371)
T ss_dssp             HHHHHHHHHTSSCCSSSHHHH----HHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTH
T ss_pred             HHHHHHHHHcCCCccCCHHHH----HHHHHHHHHHCcC--e--EEEEecHHHHHHHHHHHhcccCCCCCeeecccccccc
Confidence            445677777443222465543    4556799999994  2  899999999999999988776554  675 4454442


Q ss_pred             HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccc
Q 021539          182 DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATG  260 (311)
Q Consensus       182 ~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQ  260 (311)
                      . +.. ....|++.+++.++. ++.++.+.+++.+.++     ++.|.+.+ ..|...++++|.+ ++++|+.++-||+|
T Consensus        86 ~-~~a-i~~~G~~pv~vDi~~-~~~~~~~~~~~~~~~~-----t~avi~vh-~~G~~~~~~~i~~~~~~~~i~lIEDaaq  156 (371)
T d2fnua1          86 T-ANM-LLESGYTPVFAGIKN-DGNIDELALEKLINER-----TKAIVSVD-YAGKSVEVESVQKLCKKHSLSFLSDSSH  156 (371)
T ss_dssp             H-HHH-HHHTTCEEEECCBCT-TSSBCGGGSGGGCCTT-----EEEEEEEC-GGGCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred             c-cee-eeccCcccccccccc-cccccchhhhhhccch-----hhcccccc-ccccccccccccccccccchhhccchhh
Confidence            2 211 234699999999886 4556667677666654     45554444 4799999999966 69999999999999


Q ss_pred             cCccCcccCC--CC-CCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          261 LVFGEDQLAL--AL-HRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       261 sv~G~~pldl--~~-l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      +. |...-+-  .. ..+.+++|...| .++.  |-|++++.+
T Consensus       157 a~-Ga~~~~~~~G~~g~~~~~Sf~~~K-~l~~--g~GG~i~t~  195 (371)
T d2fnua1         157 AL-GSEYQNKKVGGFALASVFSFHAIK-PITT--AEGGAVVTN  195 (371)
T ss_dssp             CT-TCEETTEETTSSSSEEEEECCTTS-SSCC--SSCEEEEES
T ss_pred             cc-CceeccccCCcccccccccccccc-cccc--ccceEEEee
Confidence            99 8643221  11 224444455568 5542  445554443

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.84  E-value=5.4e-09  Score=99.93  Aligned_cols=164  Identities=13%  Similarity=0.003  Sum_probs=113.9

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc----cCcChHH--HHHHHHhCCc
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI----ISEESDY--IKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~----~eh~~~~--~~~la~~~G~  193 (311)
                      |-.....+ +-|.+++.++||+.   |--|=.-+++.|+..+..++ .++||.|++.    -+|-+..  ...  ..+..
T Consensus        63 G~~~id~iE~la~~ra~~lF~a~---~anVqp~SGs~An~av~~al-l~pGD~im~l~l~~GGHlshg~~~~~--~g~~~  136 (405)
T d1kl1a_          63 GCEYVDIVEELARERAKQLFGAE---HANVQPHSGAQANMAVYFTV-LEHGDTVLGMNLSHGGHLTHGSPVNF--SGVQY  136 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCCS---EEECCCSSHHHHHHHHHHHH-CCTTCEEEEECGGGTCCGGGTCTTSH--HHHHS
T ss_pred             CchhHHHHHHHHHHHHHHHhCCC---cceeeccCchHHHHHHHHHh-cCCCCEEEEeecccccccccCccccc--cceEE
Confidence            44444444 46999999999994   21222347888888888888 6899999743    2232211  111  11246


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-----  267 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-----  267 (311)
                      ++...|++.+++.||.+++++..++.    +.+|+.+.....-.-.|++++++ |++.|+++++|++|.. |.+-     
T Consensus       137 ~~~~y~~d~~~~~ID~d~l~~~a~~~----kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~~-GLIa~g~~~  211 (405)
T d1kl1a_         137 NFVAYGVDPETHVIDYDDVREKARLH----RPKLIVAAASAYPRIIDFAKFREIADEVGAYLMVDMAHIA-GLVAAGLHP  211 (405)
T ss_dssp             EEEEECBCTTTCSBCHHHHHHHHHHH----CCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHTTSSC
T ss_pred             EEEEeccchhcccccHHHHHHHHHhh----CcceEEecccccccccChHHHHHHHhhhCCEEecchhhHh-hhhhhhhcC
Confidence            77777888778899999999888764    24687776555667789999987 5899999999999986 6543     


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      =.+.  .+|+++.|.||++.| |+|- +++.+
T Consensus       212 ~P~~--~aDvvt~tThKtlrG-Prgg-~I~~~  239 (405)
T d1kl1a_         212 NPVP--YAHFVTTTTHKTLRG-PRGG-MILCQ  239 (405)
T ss_dssp             CSTT--TCSEEEEESSSTTCC-CSCE-EEEEC
T ss_pred             Chhh--hhhheeccccccccC-CCCc-eEEec
Confidence            3342  489999999996666 9753 44444

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.80  E-value=4.5e-08  Score=90.17  Aligned_cols=164  Identities=13%  Similarity=0.121  Sum_probs=109.6

Q ss_pred             HHHHHHHHHcC----C-CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHCG----L-SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~Lg----a-~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.||++++    . ..++.+|++|+|+++++.++...+ ..+||.|+.. -.+..  ....++..|.++..+|.+..
T Consensus        66 ~lr~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l-~~~gd~vlv~~P~y~~--~~~~~~~~g~~~~~~~~~~~  142 (388)
T d1gdea_          66 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAF-LKDGEEVLIPTPAFVS--YAPAVILAGGKPVEVPTYEE  142 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTT-CCTTCEEEEEESCCTT--HHHHHHHHTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHhhccccCCChheeeeccCcchHHHHHHHHh-cCCCCEEEECCCCcHH--HHHHHHHcCCEEEEeecccc
Confidence            67888888763    1 112335999999999999999887 4689998632 23321  12233445899999997643


Q ss_pred             C-cccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccCCCC-
Q 021539          204 D-LRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLALAL-  272 (311)
Q Consensus       204 ~-g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pldl~~-  272 (311)
                      + ..+|.++|++.++++     ++++.+  +++=||..++-+++   .+ |++++++++.|-+.+-.   +.....+.. 
T Consensus       143 ~~~~~d~~~l~~~~~~~-----~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~  217 (388)
T d1gdea_         143 DEFRLNVDELKKYVTDK-----TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASL  217 (388)
T ss_dssp             GTTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred             cCCCCCHHHHHHhCccC-----CeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhc
Confidence            2 368999999988764     445544  34469999987665   33 58999999999987521   111112221 


Q ss_pred             ---CCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          273 ---HRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       273 ---l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                         .+-.+++.|+-| .||.| -.+|.++..++.
T Consensus       218 ~~~~~~~i~~~S~SK-~~~~~GlR~G~ii~~~~~  250 (388)
T d1gdea_         218 DGMFERTITVNGFSK-TFAMTGWRLGFVAAPSWI  250 (388)
T ss_dssp             TTCGGGEEEEEESTT-TTTCGGGCCEEEECCHHH
T ss_pred             cCCCCeEEEEeCChh-hccCccccEEEEEeeccc
Confidence               123588899999 88755 238988876543

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=98.80  E-value=1.2e-08  Score=97.90  Aligned_cols=163  Identities=12%  Similarity=0.026  Sum_probs=112.2

Q ss_pred             hhhhhHHH-HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cC---cChHH--HHHHHHhCCc
Q 021539          121 GNFISIPE-IQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-IS---EESDY--IKGFAAQKES  193 (311)
Q Consensus       121 G~~~~~~l-e~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~e---h~~~~--~~~la~~~G~  193 (311)
                      |......+ .-|+++..++||+.-.   -|=.-+++.|+..+..++ .++||.|++. ..   |-+..  +..  ..+.+
T Consensus        66 G~~~iD~iE~la~~ra~~lF~a~~a---nVqp~SGs~AN~av~~Al-l~pGD~Il~l~l~~GGHlshg~~~~~--~g~~~  139 (416)
T d1dfoa_          66 GCEYVDIVEQLAIDRAKELFGADYA---NVQPHSGSQANFAVYTAL-LEPGDTVLGMNLAHGGHLTHGSPVNF--SGKLY  139 (416)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHH-CCTTCEEEEECTTTTCCGGGTCTTSH--HHHHS
T ss_pred             CChhHHHHHHHHHHHHHHHhCCCcc---eeecccCccHHHHHHHHh-cCCCCeeeeccccccccccccccccc--cCceE
Confidence            44444444 4689999999999421   222357778888888887 5899999743 22   21111  111  11235


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCcc-----
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQ-----  267 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~p-----  267 (311)
                      ++...+++. ++.||.+++++..++.    +.+|+.+.........|++++.+ |++.|+++++|++|.. |.+-     
T Consensus       140 ~~~~y~~d~-~~~IDyd~l~~~a~~~----kPklIi~G~S~y~r~~d~~~~reiad~vga~l~~D~aH~~-GLIa~g~~~  213 (416)
T d1dfoa_         140 NIVPYGIDA-TGHIDYADLEKQAKEH----KPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVA-GLVAAGVYP  213 (416)
T ss_dssp             EEEEECBCS-SSSBCHHHHHHHHHHH----CCSEEEEECSSCCSCCCHHHHHHHHHHTTCEEEEECTTTH-HHHHHTSSC
T ss_pred             EEEecccCC-ccCccHHHHHHHHHHh----ccceEEecccccccccCHHHHHHHHHhcCceEEcchhhhh-cceeccccC
Confidence            666677775 6789999998887753    24687776556888999999987 5999999999999987 6543     


Q ss_pred             cCCCCCCCcEEEEccccCcCCCCCceEEEEEe
Q 021539          268 LALALHRPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       268 ldl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      =.+.  .+|+++.|.||++.| |+| |+++.+
T Consensus       214 sP~~--~aDvvt~tThKtlrG-Prg-giI~~~  241 (416)
T d1dfoa_         214 NPVP--HAHVVTTTTHKTLAG-PRG-GLILAK  241 (416)
T ss_dssp             CCTT--TSSEEEEESSSTTCC-CSC-EEEEES
T ss_pred             Cccc--ccceeeeehhhcccC-CCc-eEEEec
Confidence            3343  379999999996666 974 444444

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=98.80  E-value=2.1e-08  Score=95.21  Aligned_cols=179  Identities=10%  Similarity=0.021  Sum_probs=110.3

Q ss_pred             HHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC------CCCCCEEEEccCcChHH
Q 021539          110 LDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP------FFKGNYYLTIISEESDY  183 (311)
Q Consensus       110 ~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~------~~~Gd~Ils~~eh~~~~  183 (311)
                      ..+......|.|....   .+.++.+++++|.+  .  ++||+++|+|+.+++..+.      ......++....|+...
T Consensus        62 a~~~~gd~~y~~~~~~---~~le~~~a~l~g~~--~--~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~  134 (465)
T d1ax4a_          62 AAMITGDEAYAGSRNY---YDLKDKAKELFNYD--Y--IIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTT  134 (465)
T ss_dssp             HHHHTCCCCSSSCHHH---HHHHHHHHHHHCCC--E--EEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHH
T ss_pred             HHHhhhhhhhccChHH---HHHHHHHHHHHCCC--E--EEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhh
Confidence            3445555667665543   35677899999983  3  9999999999988766541      11222344344455222


Q ss_pred             HHHHHHhCCcEEEEEeC---------CCCCcccCHHHHHhhhhccCCCCCceEEEEecc--c-ccchhcHH---HHHH-H
Q 021539          184 IKGFAAQKESKVIAAPE---------TWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V-NGTRYSMH---WISE-A  247 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~---------~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~-tG~i~Pi~---~I~~-a  247 (311)
                      . ......|.....++.         +...+.+|.++|++++++..+ ..+.++.+...  . .|...|.+   +|.+ |
T Consensus       135 ~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~  212 (465)
T d1ax4a_         135 A-AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA-DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIA  212 (465)
T ss_dssp             H-HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHH
T ss_pred             H-HHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhcc-ccccceeeccccccCceecCCHHHHHHHHHHH
Confidence            1 122334666654422         222577899999999986432 12345554433  2 34445554   5544 6


Q ss_pred             HHCCcEEEecccccCccCccc------------------CCCCCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          248 HRNAWHVLLDATGLVFGEDQL------------------ALALHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       248 ~~~g~~vlvDAaQsv~G~~pl------------------dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +++|+++|+|++|.. |....                  |+. .-.|.+++|.|| .+|+| +.|+++.+++
T Consensus       213 ~~~g~~l~~D~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~d~~s~s~~k-~~~~~-~~g~l~~~~~  280 (465)
T d1ax4a_         213 KQHGIFVVMDSARFC-ENAYFIKARDPKYKNATIKEVIFDMY-KYADALTMSAKK-DPLLN-IGGLVAIRDN  280 (465)
T ss_dssp             HHHTCCEEEECTTHH-HHHHHHHHHCGGGTTCCHHHHHHHHG-GGCSEEEEETTS-TTCCS-SCEEEEESSC
T ss_pred             HHcCCEEEEECcchh-hhhcccccccccccccchhhhccccc-cccceeEeeccc-Ccccc-cceeEeecch
Confidence            899999999999986 53321                  111 126999999999 66635 6798888764

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.78  E-value=1.6e-08  Score=98.06  Aligned_cols=167  Identities=13%  Similarity=0.043  Sum_probs=106.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhcCCCCCCCEEEEc----cCcChHHH-HH--HHHhCC--c
Q 021539          124 ISIPEIQARNRALKHCGLSEDEYLVLF-VPNYKEAMLMIGESYPFFKGNYYLTI----ISEESDYI-KG--FAAQKE--S  193 (311)
Q Consensus       124 ~~~~le~aR~~IA~~Lga~~dey~VvF-TsnaTealnlv~~s~~~~~Gd~Ils~----~eh~~~~~-~~--la~~~G--~  193 (311)
                      +...+.-|++++.++||++..+..|=. .-+++.|+..+..++ .++||.|++.    -+|-+... ..  -....|  +
T Consensus        71 iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SGs~An~av~~al-l~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~  149 (463)
T d2a7va1          71 VDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL-LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF  149 (463)
T ss_dssp             CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-CCSCEECCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCchhccCCccccccHHHHHHHHHHH-cCCCceEEeeccCcCcccccccccccccccceeeEe
Confidence            334445689999999999765322222 247788888888887 5899998522    12322211 00  001112  2


Q ss_pred             EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecccccchhcHHHHHH-HHHCCcEEEecccccCccCccc----
Q 021539          194 KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVVVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQL----  268 (311)
Q Consensus       194 ~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pl----  268 (311)
                      ++...+++..++.||.+++++..++.    +.+|+.+.....-...|++++++ |++.|+++++|++|.+ |.+-=    
T Consensus       150 ~~~~Y~~d~~~~~IDyd~~~~~a~~~----kPklIi~G~S~y~r~~d~~~~reIad~vga~l~~D~aH~a-GLIA~g~~~  224 (463)
T d2a7va1         150 ESMPYKLNPKTGLIDYNQLALTARLF----RPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHIS-GLVAAKVIP  224 (463)
T ss_dssp             ----CCBCTTTCSBCHHHHHHHHHHH----CCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGH-HHHHTTSSC
T ss_pred             eeeeeeccCCCCcCcHHHHHHHHhhc----CCceEEecccccccccCHHHHHHHhhcccceEEechhhhh-HHhhhhhhc
Confidence            33334456557889999999888764    24688776555677889999987 5899999999999987 65433    


Q ss_pred             -CCCCCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          269 -ALALHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       269 -dl~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                       ++.  .+|++++|.||++.| |+| |+++.++
T Consensus       225 sP~~--~aDvvt~tTHKTlrG-Prg-GiIl~~~  253 (463)
T d2a7va1         225 SPFK--HADIVTTTTHKTLRG-ARS-GLIFYRK  253 (463)
T ss_dssp             CGGG--TCSEEEEESSGGGCS-CSC-EEEEEEC
T ss_pred             Chhh--hhhhhhchhhhhhcC-CCc-eEEEEcc
Confidence             332  379999999996667 974 5555555

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=98.76  E-value=7.8e-08  Score=88.92  Aligned_cols=180  Identities=8%  Similarity=0.030  Sum_probs=115.8

Q ss_pred             hHHHHhcC-CCCcchhhhhHHHHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCc
Q 021539          108 RLLDILSK-KTSFKGNFISIPEIQARNRALKHC------GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISE  179 (311)
Q Consensus       108 ~l~~~l~~-~ss~~G~~~~~~le~aR~~IA~~L------ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh  179 (311)
                      ++.+.+.+ ...|+...-.   .+.|+.|++++      +++++  +|++|+|+++|+..++.++ ..+||.|+.. -.+
T Consensus        52 a~~~~~~~~~~~Y~~~~G~---~~lR~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~l-~~~gd~vl~~~P~y  125 (382)
T d1b5pa_          52 AARRALAQGKTKYAPPAGI---PELREALAEKFRRENGLSVTPE--ETIVTVGGSQALFNLFQAI-LDPGDEVIVLSPYW  125 (382)
T ss_dssp             HHHHHHHTTCCSCCCTTCC---HHHHHHHHHHHHHTTCCCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCC
T ss_pred             HHHHHHhcCCcCCCCCCCC---HHHHHHHHhhhhhhcccccccc--cceecCCHHHHHHHHHHHh-CCCCCEEEECCCCc
Confidence            44455533 2455432211   25777888776      45554  4999999999999999987 4689988632 222


Q ss_pred             ChHHHHHHHHhCCcEEEEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCc
Q 021539          180 ESDYIKGFAAQKESKVIAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAW  252 (311)
Q Consensus       180 ~~~~~~~la~~~G~~V~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~  252 (311)
                      . . ....++..|.++..+|.... +..++.+++++.++++     ++++.+  +++=||.+++-+++.   + |+++++
T Consensus       126 ~-~-~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~  198 (382)
T d1b5pa_         126 V-S-YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR-----TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDF  198 (382)
T ss_dssp             T-H-HHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred             H-H-HHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCC-----CeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCe
Confidence            2 2 22345566999999886542 3357899998888754     444443  344599999987653   3 589999


Q ss_pred             EEEecccccCc--cCcccC-CC-CCCCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          253 HVLLDATGLVF--GEDQLA-LA-LHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       253 ~vlvDAaQsv~--G~~pld-l~-~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      +++.|-+.+-.  ...+.. .. ..+--+++.|+=| .||.| |  +|+++..++.
T Consensus       199 ~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK-~~~~~-GlR~G~~~~~~~~  252 (382)
T d1b5pa_         199 YLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAK-AFAMT-GWRIGYACGPKEV  252 (382)
T ss_dssp             EEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTT-TTTCG-GGCCEEEECCHHH
T ss_pred             EEEEEccccceecCCCCCCHHHcCCCCEEEEecchh-hccCc-HhheEEEEECHHH
Confidence            99999887631  111111 11 1123477788999 88855 6  8998876554

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=98.75  E-value=5e-08  Score=90.82  Aligned_cols=161  Identities=16%  Similarity=0.159  Sum_probs=107.9

Q ss_pred             HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G--LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g--a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++    |  ++++  +|++|+|+++|+.+++.++ ..+||.|+.. -.+. .. ...++..|.++..++.+.
T Consensus        71 ~lR~aia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~-~~-~~~~~~~~~~~v~~~~~~  145 (388)
T d1j32a_          71 RLREAIAQKLQRDNGLCYGAD--NILVTNGGKQSIFNLMLAM-IEPGDEVIIPAPFWV-SY-PEMVKLAEGTPVILPTTV  145 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEESSCCT-HH-HHHHHHTTCEEEEECCCG
T ss_pred             HHHHHHHHHHHHhcccCCCCc--eEEEcCCHHHHHHHHHHHH-hCCCCEEEEcCCCcH-HH-HHHHHHhcCeEEEEeccc
Confidence            5677777664    3  4444  5999999999999999887 4689998643 2222 21 223344577887787654


Q ss_pred             C-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH----HHHCCcEEEecccccCc---cCcccCCCC
Q 021539          203 L-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVF---GEDQLALAL  272 (311)
Q Consensus       203 ~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~---G~~pldl~~  272 (311)
                      . +..++.++|++.++++     ++++.+  +++=||..++.+++.+    |+++|+++++|-+....   +.....+..
T Consensus       146 ~~~~~~d~~~l~~~~~~~-----~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~  220 (388)
T d1j32a_         146 ETQFKVSPEQIRQAITPK-----TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGA  220 (388)
T ss_dssp             GGTTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred             ccccCCCHHHHHHhCCCC-----CeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHH
Confidence            2 2358999999988765     445444  3446999999877632    58899999999986431   111122222


Q ss_pred             C-----CCcEEEEccccCcCCCCCc--eEEEEEeCCC
Q 021539          273 H-----RPDLVLCTLDNNTHAQPLK--ITCLLVRRKS  302 (311)
Q Consensus       273 l-----~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~  302 (311)
                      .     +-.+++.|+.| .||.| |  +|.++..++.
T Consensus       221 ~~~~~~~~~i~~~S~SK-~~~~~-GlRvG~~~~~~~~  255 (388)
T d1j32a_         221 ASPEAYERSVVCSGFAK-TYAMT-GWRVGFLAGPVPL  255 (388)
T ss_dssp             SCHHHHHTEEEEEESTT-TTTCT-TTCCEEEECCHHH
T ss_pred             hCcccccceeEecCChh-hhhcc-hhHeEEEEECHHH
Confidence            1     23588999999 88845 6  8998876544

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=98.74  E-value=2.8e-08  Score=91.09  Aligned_cols=160  Identities=14%  Similarity=0.020  Sum_probs=103.8

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCE-EEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCCccc
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNY-YLTI-ISEESDYIKGFAAQKESKVIAAPETWLDLRI  207 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~-Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~g~i  207 (311)
                      +.|+.+|+++|+++++  |++|+|+++++.++.+++ ..+||. |++. ..+. . ....++..|.++..++.+. +..+
T Consensus        60 ~Lr~~ia~~~gv~pe~--I~it~Gs~eai~~~~~~~-~~pgd~~Vl~~~P~y~-~-~~~~~~~~g~~v~~~~~~~-~~~~  133 (354)
T d1fg7a_          60 AVIENYAQYAGVKPEQ--VLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG-M-YSVSAETIGVECRTVPTLD-NWQL  133 (354)
T ss_dssp             HHHHHHHHHHTSCGGG--EEEESHHHHHHHHHHHHH-CCTTTCEEEECSSSCT-H-HHHHHHHHTCEEEECCCCT-TSCC
T ss_pred             HHHHHHHHHhCCChHH--eeeccCchHHHHHHHHHh-hccccccccccccccc-c-chhhhhccCceeecccccc-cccc
Confidence            6899999999999875  999999999999999988 367874 6532 2322 1 1222344589998888764 6678


Q ss_pred             CHHHHHhhhhccCCCCCceEEEE-ecc-cccchhcHHHHH---HH-HHCCcEEEecccccCccCc--ccCCCCCCCcEEE
Q 021539          208 KGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYSMHWIS---EA-HRNAWHVLLDATGLVFGED--QLALALHRPDLVL  279 (311)
Q Consensus       208 d~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~Pi~~I~---~a-~~~g~~vlvDAaQsv~G~~--pldl~~l~~Dfl~  279 (311)
                      |.++++..+.+      ++++.+ +.+ -+|...+-+++.   ++ +.+++.++-|+..-.+...  +.......--+++
T Consensus       134 d~~~l~~~~~~------~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~  207 (354)
T d1fg7a_         134 DLQGISDKLDG------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAIL  207 (354)
T ss_dssp             CHHHHHTSCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEE
T ss_pred             chhhhhhcccc------cceeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEE
Confidence            99888776642      345544 333 699999876653   33 3344455555543331111  1112223445677


Q ss_pred             EccccCcCCCC-CceEEEEEeCCC
Q 021539          280 CTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       280 ~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                      .|+.| .||.| -.+|.++..++.
T Consensus       208 ~S~SK-~~~laGlRiGy~i~~~~~  230 (354)
T d1fg7a_         208 RTLSK-AFALAGLRCGFTLANEEV  230 (354)
T ss_dssp             EESSS-TTCCGGGCCEEEEECHHH
T ss_pred             eCCcc-ccCCCccccccccccchh
Confidence            89999 88844 248988876654

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=98.74  E-value=8e-08  Score=91.39  Aligned_cols=161  Identities=11%  Similarity=-0.028  Sum_probs=112.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-h-HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-S-DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-~-~~~~~la~~~G~~V~~  197 (311)
                      +|....-.+...++||++-|+.  .  .+.++++-.|+..++.++ .++||+|+.... +. . ..+....++.|+++.+
T Consensus        54 ~R~~nPT~~~LE~~la~LEg~~--~--a~~~~SGmaAi~~~l~~l-~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~  128 (392)
T d1gc0a_          54 SRISNPTLNLLEARMASLEGGE--A--GLALASGMGAITSTLWTL-LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH  128 (392)
T ss_dssp             ---CCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred             cCCCChHHHHHHHHHHHHhCCc--c--eeehhhHHHHHHHHHHhh-ccCCCeeecccccchhhhhhhhhhhccCCccccc
Confidence            5555555667788899999984  2  455677777888777776 478999874433 33 2 2344455677999999


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCc-cCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVF-GEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~-G~~pldl~~l  273 (311)
                      ++..      +.+.++++++++     |+||-+-..  -+..+.||+.|++ ||++|+.++||.|-+-. ...|++   +
T Consensus       129 ~d~~------d~~~~~~ai~~~-----t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~---~  194 (392)
T d1gc0a_         129 VDMA------DLQALEAAMTPA-----TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLE---L  194 (392)
T ss_dssp             ECTT------CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGG---G
T ss_pred             CCcc------CHHHHHHhCCCC-----CeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCccccChHH---h
Confidence            8653      468899999875     678876432  5899999999976 69999999999997741 344665   5


Q ss_pred             CCcEEEEccccCcCCCCCc-eEEEEEeC
Q 021539          274 RPDLVLCTLDNNTHAQPLK-ITCLLVRR  300 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~G-iG~L~vr~  300 (311)
                      ++|+++-|+-|++-|.--. .|+++.++
T Consensus       195 GaDivihS~TKyi~Ghsd~~~G~v~~~~  222 (392)
T d1gc0a_         195 GADLVVHSATKYLSGHGDITAGIVVGSQ  222 (392)
T ss_dssp             TCSEEEEETTTTTTCSSSCCCEEEEECH
T ss_pred             CCCEEEEecceeecCCcccccccccchh
Confidence            8999999999954442212 45555554

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=98.73  E-value=5.6e-08  Score=91.64  Aligned_cols=167  Identities=9%  Similarity=0.056  Sum_probs=105.1

Q ss_pred             HHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          130 QARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       130 ~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.|+.||++++        ++++  +|++|+|+|+++.+++..+ ..+||.|+.. -.+. .....+....|++++.++.
T Consensus        87 ~LR~aiA~~l~~~~~~~~~~~~e--~Ivit~G~~~al~~~~~~l-~~~Gd~Vlv~~P~y~-~~~~~~~~~~g~~~v~v~~  162 (428)
T d1iaya_          87 EFRKAIAKFMEKTRGGRVRFDPE--RVVMAGGATGANETIIFCL-ADPGDAFLVPSPYYP-AFNRDLRWRTGVQLIPIHC  162 (428)
T ss_dssp             HHHHHHHHHHHHHTTTCSCCCTT--SCEEEEHHHHHHHHHHHHH-CCTTCEEEEESSCCT-THHHHTTTTTCCEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCCCCCChh--hEEEcCCHHHHHHHHHHHh-CCCCCEEEEccCCch-HHHHHHHHhcCCeEEEeec
Confidence            68888888863        3444  4999999999999999887 3689998643 2332 1122222234899988887


Q ss_pred             CCC-CcccCHHHHHhhhhccC-CCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccC
Q 021539          201 TWL-DLRIKGSQLSQNFRRKC-KYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLA  269 (311)
Q Consensus       201 ~~~-~g~id~~~L~~~l~~~~-~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pld  269 (311)
                      +.. +..++.+.++..+.... ...+++++.++  ++-||..++.+++   .+ |+++++++++|.+.+-.   +.....
T Consensus       163 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s  242 (428)
T d1iaya_         163 ESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVS  242 (428)
T ss_dssp             CTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCC
T ss_pred             ccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccc
Confidence            642 34678887765543210 11124454443  4468999886554   33 68999999999997630   111111


Q ss_pred             C-----------CCCCCcEEEEccccCcCCCC-CceEEEEEeCC
Q 021539          270 L-----------ALHRPDLVLCTLDNNTHAQP-LKITCLLVRRK  301 (311)
Q Consensus       270 l-----------~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~  301 (311)
                      +           ...+--+++.|+-| .||.| -.+|+++..++
T Consensus       243 ~~~~~~~~~~~~~~~~~vi~~~s~SK-~~~~~GlRiG~~~~~~~  285 (428)
T d1iaya_         243 IAEILDEQEMTYCNKDLVHIVYSLSK-DMGLPGFRVGIIYSFND  285 (428)
T ss_dssp             HHHHHTSGGGTTSCTTSEEEEEESTT-TSSCGGGCEEEEEESCH
T ss_pred             cccccchhhccccccceEEEEecCCC-cccCCCccccccccccc
Confidence            1           11122478889999 77644 13898887543

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.70  E-value=9.7e-08  Score=88.99  Aligned_cols=163  Identities=15%  Similarity=0.104  Sum_probs=106.2

Q ss_pred             HHHHHHHHHcC------------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEE
Q 021539          130 QARNRALKHCG------------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVI  196 (311)
Q Consensus       130 ~aR~~IA~~Lg------------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~  196 (311)
                      +.|+.||++++            ++++  +|++|+|+++|+.+++.++ ..+||.|+. .-.+. . ....++..|.+++
T Consensus        76 ~LReaia~~~~~~~~~~~~~~~~~~~~--~I~it~G~~~al~~~~~~l-~~~Gd~Vlv~~P~y~-~-~~~~~~~~G~~~~  150 (412)
T d1bw0a_          76 EAREAVATWWRNSFVHKEELKSTIVKD--NVVLCSGGSHGILMAITAI-CDAGDYALVPQPGFP-H-YETVCKAYGIGMH  150 (412)
T ss_dssp             HHHHHHHHHHHHHHCCSTTTGGGCCGG--GEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCT-H-HHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHHhcCcccccCCCCCCC--eEEEecccccchhhhhhhh-hccccceeeeeccch-h-hhhhhhccCcccc
Confidence            68888888762            4444  4999999999999999887 478999863 22332 1 2233456799999


Q ss_pred             EEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCc---cCc
Q 021539          197 AAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVF---GED  266 (311)
Q Consensus       197 ~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~---G~~  266 (311)
                      .+|.+.. +...+.++|++..+++     ++++.+  +++-||++++.+++.   + |+++++++++|-+-.-.   |..
T Consensus       151 ~v~~~~~~~~~~~~~~l~~~~~~~-----~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~  225 (412)
T d1bw0a_         151 FYNCRPENDWEADLDEIRRLKDDK-----TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKD  225 (412)
T ss_dssp             EEEEEGGGTTEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSC
T ss_pred             ccccccccccchhhHHHHhhhhcc-----ccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCC
Confidence            9987542 3356888888877654     445444  344699999877653   2 57899999999876421   111


Q ss_pred             ccC-------CCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          267 QLA-------LALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       267 pld-------l~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      +..       +.....=++..|+-| .||.| -.+|.+++.+...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~s~SK-~~~~~G~RvG~~~~~~~~~  269 (412)
T d1bw0a_         226 PNATFTSVADFETTVPRVILGGTAK-NLVVPGWRLGWLLYVDPHG  269 (412)
T ss_dssp             TTCCCCCTTSSCCSCCEEEEEESTT-TTSCGGGCCEEEEEECTTC
T ss_pred             CccccccccccccccccccccccCc-cCccCCCCcccccccchhh
Confidence            111       111112255667889 66534 2489999876544

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=7.3e-08  Score=91.70  Aligned_cols=178  Identities=8%  Similarity=0.022  Sum_probs=109.5

Q ss_pred             HhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC--------CCCCCEEEEccCcChHH
Q 021539          112 ILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP--------FFKGNYYLTIISEESDY  183 (311)
Q Consensus       112 ~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~--------~~~Gd~Ils~~eh~~~~  183 (311)
                      +......|.|.....   +.++++++++|.+  .  ++|++++|+|+.+++..+.        ..++..+.....|+...
T Consensus        63 ~~~gd~~Y~~~~~~~---~le~~~a~l~G~~--~--~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~  135 (467)
T d2v1pa1          63 MMRGDEAFSGSRSYY---ALAESVKNIFGYQ--Y--TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT  135 (467)
T ss_dssp             TTSCCCCSSSCHHHH---HHHHHHHHHTCCS--E--EEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHH
T ss_pred             ccccchhhcCCchHH---HHHHHHHHHHCCC--E--EEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEeccccccc
Confidence            334445666654443   5567899999984  2  8999999999888766541        12223343333444221


Q ss_pred             HHHHHHhCCcEEEEEeCCC---------CCcccCHHHHHhhhhccCCCCCceEEEEecc--c-ccchhcH---HHHHH-H
Q 021539          184 IKGFAAQKESKVIAAPETW---------LDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV--V-NGTRYSM---HWISE-A  247 (311)
Q Consensus       184 ~~~la~~~G~~V~~vp~~~---------~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~--~-tG~i~Pi---~~I~~-a  247 (311)
                       .......|+++..++.+.         ..+.+|.++|++.+++..+ ..+.++++...  . -|...|+   ++|.+ |
T Consensus       136 -~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia  213 (467)
T d2v1pa1         136 -QGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPYIVATITSNSAGGQPVSLANLKAMYSIA  213 (467)
T ss_dssp             -HHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCG-GGCCCEEEESSBCGGGCBCCCHHHHHHHHHHH
T ss_pred             -HHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCc-cccceeeecceeeccccccCCHHHHHHHHHHH
Confidence             122334588888776542         1356899999999986422 12456665433  2 3555555   45555 6


Q ss_pred             HHCCcEEEecccccCccCcccC-----------CC------CCCCcEEEEccccCcCCCCCceEEEEEeCC
Q 021539          248 HRNAWHVLLDATGLVFGEDQLA-----------LA------LHRPDLVLCTLDNNTHAQPLKITCLLVRRK  301 (311)
Q Consensus       248 ~~~g~~vlvDAaQsv~G~~pld-----------l~------~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~  301 (311)
                      +++|+++|+|++|++ |.....           +.      -..+|.+++|.|| -+++| +-|++..+++
T Consensus       214 ~~~g~~l~~D~a~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K-~~~~~-~gg~i~~~~~  281 (467)
T d2v1pa1         214 KKYDIPVVMDSARFA-ENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKK-DAMVP-MGGLLCMKDD  281 (467)
T ss_dssp             HHTTCCEEEECTTHH-HHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSS-TTCCS-SCEEEEECSG
T ss_pred             HHcCCEEEEechhhh-ccccccccccccccCCcccccchhhcccCCEEEecCCC-CCCCC-CceeEEecch
Confidence            999999999999987 532211           00      1248999999999 55536 3466665554

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=98.67  E-value=6.6e-07  Score=85.06  Aligned_cols=176  Identities=7%  Similarity=-0.014  Sum_probs=119.1

Q ss_pred             chhHHHHhcC-CCCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC---
Q 021539          106 PSRLLDILSK-KTSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE---  180 (311)
Q Consensus       106 ~~~l~~~l~~-~ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~---  180 (311)
                      .+.+.+.+.. ...| .||....-.+..-+++|.+-|..  .  .+.++++..|+..++.++ .++||+|+....-.   
T Consensus        41 ~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg~--~--a~~~sSGmaAi~~~l~~l-l~~Gd~vi~~~~~Yg~t  115 (397)
T d1y4ia1          41 AEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE--A--GLATASGISAITTTLLTL-CQQGDHIVSASAIYGCT  115 (397)
T ss_dssp             HHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESSSCHHH
T ss_pred             HHHHHHhhcCCcCCceeeCCCCHHHHHHHHHHHHHhCCc--c--ceeehHHHHHHHHHHhhc-cCCCCeeeeeccccccc
Confidence            4445555533 3333 36666666667788899999883  2  455667777887777766 47899997544322   


Q ss_pred             hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHHCCcEEEec
Q 021539          181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                      ...+.....+.|+++.++...      +.+.++++++++     |+||-+-.  +-+..+.||+.|++ +|++|++++||
T Consensus       116 ~~~~~~~l~~~Gi~~~~vd~~------d~~~~~~~i~~~-----Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvD  184 (397)
T d1y4ia1         116 HAFLSHSMPKFGINVRFVDAG------KPEEIRAAMRPE-----TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVD  184 (397)
T ss_dssp             HHHHHTHHHHTTCEEEEECTT------SHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             chhhhcccCCCceEeeccCCC------CHHHHHHhcCCC-----CcEEEecCCcccceeecccHHHHHHhhcCCceEEec
Confidence            122344456789999988653      468899999865     67887632  35899999999976 69999999999


Q ss_pred             ccccCc-cCcccCCCCCCCcEEEEccccCcCCCCCc-eEEEEEeC
Q 021539          258 ATGLVF-GEDQLALALHRPDLVLCTLDNNTHAQPLK-ITCLLVRR  300 (311)
Q Consensus       258 AaQsv~-G~~pldl~~l~~Dfl~~S~HK~l~G~P~G-iG~L~vr~  300 (311)
                      .|=+-+ ...|++   +++|+++-|+=|++-|.--- .|+++.++
T Consensus       185 nT~atP~~~~Pl~---~GaDivihS~TKyi~Ghsdvl~G~v~~~~  226 (397)
T d1y4ia1         185 NTFMSPYCQQPLQ---LGADIVVHSVTKYINGHGDVIGGIIVGKQ  226 (397)
T ss_dssp             CTTTCTTTCCGGG---GTCSEEEEETTTTTTCSSCCCCEEEEECH
T ss_pred             CcccCcccCcchh---cCCCEEEEehhhhcCCCcceeeeccCCCH
Confidence            995530 333333   58999999999955443222 45555544

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=98.66  E-value=1.1e-06  Score=79.85  Aligned_cols=162  Identities=8%  Similarity=0.007  Sum_probs=102.9

Q ss_pred             HHHHHHHH----cCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC--C
Q 021539          131 ARNRALKH----CGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW--L  203 (311)
Q Consensus       131 aR~~IA~~----Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~--~  203 (311)
                      .|+.||++    +|.+.+..+|+.|+|+++++..+..++ ..+||.|+.. -.+. + ...+.+..|.+++.++.+.  +
T Consensus        40 lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~P~y~-~-~~~~~~~~g~~~~~v~~~~~~~  116 (361)
T d1d2fa_          40 FLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW-SETGEGVVIHTPAYD-A-FYKAIEGNQRTVMPVALEKQAD  116 (361)
T ss_dssp             HHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHS-SCTTCEEEEEESCCH-H-HHHHHHHTTCEEEEEECEECSS
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhc-ccccccccccccccc-c-hhHHHHhhcceEEeeccccccc
Confidence            45555554    365433335999999999999999988 4789998643 2332 2 2344455688888777542  2


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHH---HHHH-HHHCCcEEEecccccCc---cCcccCCCCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMH---WISE-AHRNAWHVLLDATGLVF---GEDQLALALHR  274 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~---~I~~-a~~~g~~vlvDAaQsv~---G~~pldl~~l~  274 (311)
                      +..++.+.+++.+.+.    +++++.++  ++-||..++.+   +|.+ |+++|+++++|.+.+-.   +..+..+....
T Consensus       117 ~~~~d~~~~~~~~~~~----~~~~i~l~~p~NPTG~~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~  192 (361)
T d1d2fa_         117 GWFCDMGKLEAVLAKP----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA  192 (361)
T ss_dssp             SEECCHHHHHHHHTST----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC
T ss_pred             ccccccccchhhcccC----CceeEEecccccccccccchhhhhhhhhhhhhhheeeeeccccccccccccccccccccc
Confidence            3457899998888653    25666554  23599999854   5544 68999999999987631   11222222222


Q ss_pred             --CcEEEEccccCcCCCC-CceEEEEEeC
Q 021539          275 --PDLVLCTLDNNTHAQP-LKITCLLVRR  300 (311)
Q Consensus       275 --~Dfl~~S~HK~l~G~P-~GiG~L~vr~  300 (311)
                        --.+..|+=| .+|.| .++|.+++..
T Consensus       193 ~~~~v~~~s~SK-~~~~~g~R~g~~~~~~  220 (361)
T d1d2fa_         193 RGDWALLTSGSK-SFNIPALTGAYGIIEN  220 (361)
T ss_dssp             CSSEEEEECSHH-HHTCGGGCCEEEEECS
T ss_pred             cccccccccccc-ccccccccceeeecch
Confidence              2366677777 55533 1577777653

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=98.64  E-value=1.7e-07  Score=85.45  Aligned_cols=159  Identities=12%  Similarity=0.047  Sum_probs=100.8

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCcccCH
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDLRIKG  209 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g~id~  209 (311)
                      +.|+.||+++|++++.  |+.|+|+++++.++...+.  .++.++..-.+. ... ......+.++..+|++..++....
T Consensus        61 ~Lr~aia~~~~v~~~~--I~~~~g~~~~~~~~~~~~~--~~~~~v~~p~~~-~~~-~~~~~~~~~~~~v~~~~~~~~~~~  134 (355)
T d1lc5a_          61 HLHQALARHHQVPASW--ILAGNGETESIFTVASGLK--PRRAMIVTPGFA-EYG-RALAQSGCEIRRWSLREADGWQLT  134 (355)
T ss_dssp             HHHHHHHHHHTSCGGG--EEEESSHHHHHHHHHHHHC--CSEEEEEESCCT-HHH-HHHHHTTCEEEEEECCGGGTTCCC
T ss_pred             HHHHHHHHHhCCCHHH--EEecccHHHHHHHHHhhhc--cccccccCCccc-eec-cccccccccceeeeeeccCCccce
Confidence            6899999999998754  9999999999988877652  333333222222 212 223345788989998654433333


Q ss_pred             HHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHH---H-HHHCCcEEEecccccCccCcccC----CCCCCCcEEE
Q 021539          210 SQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWIS---E-AHRNAWHVLLDATGLVFGEDQLA----LALHRPDLVL  279 (311)
Q Consensus       210 ~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~---~-a~~~g~~vlvDAaQsv~G~~pld----l~~l~~Dfl~  279 (311)
                      +.+.+.+.++     ++++.+  +++-||..++.+++.   + |+++++++++|-+..-....+-.    .....-.+++
T Consensus       135 ~~~~~~~~~~-----~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~  209 (355)
T d1lc5a_         135 DAILEALTPD-----LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVL  209 (355)
T ss_dssp             TTHHHHCCTT-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEE
T ss_pred             eeeeeccccc-----cceeeeecccCcccccchhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceee
Confidence            4455555544     345444  344699999976653   3 57899999999887521111111    1222345889


Q ss_pred             EccccCcCCCCCc--eEEEEEeCC
Q 021539          280 CTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       280 ~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      .|+-| .||.| |  +|+++...+
T Consensus       210 ~S~SK-~~~l~-GlR~G~~i~~~~  231 (355)
T d1lc5a_         210 RSLTK-FYAIP-GLRLGYLVNSDD  231 (355)
T ss_dssp             EESTT-TTTCT-TTCCEEEECCCH
T ss_pred             ccccc-ccccc-cccccceeccch
Confidence            99999 88754 6  798887653

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=98.63  E-value=9.8e-07  Score=82.57  Aligned_cols=148  Identities=11%  Similarity=0.095  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ...++..+.+|+++|.+  .  .++.++++.|+..++..+. .+++.|+....+|...+.. .+..+.++..++-+    
T Consensus        83 ~~~~~lE~~LA~~~g~e--~--al~~~SG~~an~~~i~al~-~~~d~v~~d~~~h~si~~g-~~~~~~~~~~~~hn----  152 (383)
T d1bs0a_          83 VVHQALEEELAEWLGYS--R--ALLFISGFAANQAVIAAMM-AKEDRIAADRLSHASLLEA-ASLSPSQLRRFAHN----  152 (383)
T ss_dssp             HHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHHC-CTTCEEEEETTCCHHHHHH-HHTSSSEEEEECTT----
T ss_pred             hHHHHHHHHHHHhcCCC--c--eEEecccchhhHHHHHhhc-CCCceEEeeccccHHHhhc-cccCCCcceEecch----
Confidence            44568889999999984  2  7888888999888888774 5778888776666444433 34557777766643    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccCC------CCCCCc
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLAL------ALHRPD  276 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl------~~l~~D  276 (311)
                        |.++|++.+.....  .+.+|++..+  ..|.+.|+++|.+ ++++|++++||-+|++ |...-+-      .....|
T Consensus       153 --d~~~le~~l~~~~~--~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~-gv~G~~g~G~~~~~~~~~~  227 (383)
T d1bs0a_         153 --DVTHLARLLASPCP--GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGT-GVIGEQGRGSCWLQKVKPE  227 (383)
T ss_dssp             --CHHHHHHHHHSCCS--SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTT-TTSSGGGCCHHHHTTCCCS
T ss_pred             --HHHHHHHHhcccCC--CceEEEecCCCCCCCcccchhHHHHHHHhcCcEEEeecceee-eecCCcccchHHHcCCccc
Confidence              56788887765321  2456666655  3899999999966 6999999999999999 8655442      235688


Q ss_pred             EEEEccccCcCCC
Q 021539          277 LVLCTLDNNTHAQ  289 (311)
Q Consensus       277 fl~~S~HK~l~G~  289 (311)
                      ++.+++=| -+|.
T Consensus       228 ~~~~t~~k-a~g~  239 (383)
T d1bs0a_         228 LLVVTFGK-GFGV  239 (383)
T ss_dssp             EEEEESSS-TTSS
T ss_pred             cccccccc-cccc
Confidence            99999999 7773

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.60  E-value=1.4e-07  Score=82.55  Aligned_cols=161  Identities=13%  Similarity=0.093  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHH--HHHHHHhCCcEEEEEeCCCCCc
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDY--IKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~--~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..+.++.+|+++|.+  .  ++||+|+|+|+.+++..+. ..|+.++.....+...  ....+...+..+..++.+  .+
T Consensus        36 ~~~le~~lA~~~G~~--~--~~~~~sGt~A~~~al~a~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  108 (343)
T d1m6sa_          36 INELERLAAETFGKE--A--ALFVPSGTMGNQVSIMAHT-QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK--NG  108 (343)
T ss_dssp             HHHHHHHHHHHTTCS--E--EEEESCHHHHHHHHHHHHC-CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEE--TT
T ss_pred             HHHHHHHHHHHHCCC--e--EEEeCCHHHHHHHHHHHHh-ccCCceeccccccceeeecccccccccceeeccccc--cC
Confidence            457889999999973  3  8999999999988888763 5678775433322111  112233345556556554  45


Q ss_pred             ccCHHHHHhhhhccCCCC-CceEEEEec-c--cccchhcHHHH---HH-HHHCCcEEEecccccCccCcccCCCC-----
Q 021539          206 RIKGSQLSQNFRRKCKYT-PKGLFSYPV-V--VNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLALAL-----  272 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~-~t~LVs~~~-~--~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pldl~~-----  272 (311)
                      ..+.+.++..+....+.. .+.++.+.. .  ..|.+.|++.+   .+ ++++|+.+++|+++.. +........     
T Consensus       109 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~-~~~~~~~~~~~~~~  187 (343)
T d1m6sa_         109 AMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIF-NASIASGVPVKEYA  187 (343)
T ss_dssp             EECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHH-HHHHHHCCCHHHHH
T ss_pred             ccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHHHHHhcCeEEEecccccc-ccccccccchhhhc
Confidence            678898888887654322 133343332 2  36677776655   33 4789999999999986 544332211     


Q ss_pred             CCCcEEEEccccCcCCCCCceEEEEE
Q 021539          273 HRPDLVLCTLDNNTHAQPLKITCLLV  298 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~GiG~L~v  298 (311)
                      ...+..+++.+|+..| . +.|+.+.
T Consensus       188 ~~~~~~~~~~~~~~~g-~-~~~~~~~  211 (343)
T d1m6sa_         188 GYADSVMFCLSKGLCA-P-VGSVVVG  211 (343)
T ss_dssp             HTCSEEEEESSSTTCC-S-SCEEEEE
T ss_pred             cccccccccccccccc-c-ccccccc
Confidence            2367777888884555 4 3444443

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=98.59  E-value=9.1e-08  Score=90.22  Aligned_cols=168  Identities=8%  Similarity=0.033  Sum_probs=105.7

Q ss_pred             HHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeC
Q 021539          130 QARNRALKHCG--------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       130 ~aR~~IA~~Lg--------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.|+.||++++        ++++  +|++|+|+|+|+.+++..+ ..+||.|+.. -.+.. ....+....|++++.++.
T Consensus        88 ~LR~aiA~~l~~~~~~~~~~~pe--~I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~-~~~~~~~~~g~~~v~v~~  163 (431)
T d1m7ya_          88 AFKKAMVDFMAEIRGNKVTFDPN--HLVLTAGATSANETFIFCL-ADPGEAVLIPTPYYPG-FDRDLKWRTGVEIVPIHC  163 (431)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCTT-HHHHTTTTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCchh-HHHHHHHhcCceeccccc
Confidence            57888888764        4444  5999999999999999987 4789998632 23321 111222234788888887


Q ss_pred             CCCC-cccCHHHHHhhhhccC-CCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccC
Q 021539          201 TWLD-LRIKGSQLSQNFRRKC-KYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLA  269 (311)
Q Consensus       201 ~~~~-g~id~~~L~~~l~~~~-~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pld  269 (311)
                      +..+ ..++.+.+++.+++.. ...+++++.++  ++-||..++-+++   .+ |+++++++++|-+.+..   +...++
T Consensus       164 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s  243 (431)
T d1m7ya_         164 TSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFIS  243 (431)
T ss_dssp             CGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCC
T ss_pred             cchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCCC
Confidence            6532 3578888877775311 11124555443  4468999886655   33 58899999999987531   111111


Q ss_pred             CCCC-------------CCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          270 LALH-------------RPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       270 l~~l-------------~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                      +...             +-=+++.|+-| .||.| ..+|+++..++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~vi~~~s~SK-~~~~~G~RiG~~~~~~~~  289 (431)
T d1m7ya_         244 VMEVLKDRNCDENSEVWQRVHVVYSLSK-DLGLPGFRVGAIYSNDDM  289 (431)
T ss_dssp             HHHHTTTTTCSSSSSGGGGEEEEEESSS-SSCCGGGCEEEEEESCHH
T ss_pred             HHHHhhhcccccccccCceEEEEecCcc-cccCCCCccceeccchhh
Confidence            1100             01267889999 88754 238988876643

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=98.59  E-value=7.2e-07  Score=84.10  Aligned_cols=162  Identities=12%  Similarity=0.047  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          126 IPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       126 ~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ...++..+.+|+++|..  .  +++++++++|+..++..+. .+++.|+.....|...+ .-+...+.++..++..    
T Consensus        90 ~~~~~lE~~lA~~~g~e--~--al~~~SG~~An~~~i~~l~-~~~d~i~~d~~~h~s~~-~G~~~~~a~~~~~~~~----  159 (401)
T d1fc4a_          90 DSHKELEQKLAAFLGME--D--AILYSSCFDANGGLFETLL-GAEDAIISDALNHASII-DGVRLCKAKRYRYANN----  159 (401)
T ss_dssp             HHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHTTHHHHC-CTTCEEEEETTCCHHHH-HHHHTSCSEEEEECTT----
T ss_pred             HHHHHHHHHHHHhhcCC--c--eEEecchhhhhHHHHHHhc-CCCcEEEeCCcchHHHH-ccccccCceEEEEcCC----
Confidence            45578899999999983  2  8899999999988887763 57888876555443322 2234456777766543    


Q ss_pred             ccCHHHHHhhhhccC-CCCCceEEEEecc-c-ccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCC--------CC
Q 021539          206 RIKGSQLSQNFRRKC-KYTPKGLFSYPVV-V-NGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALA--------LH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~-~~~~t~LVs~~~~-~-tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~--------~l  273 (311)
                        |.++++++++... ....+.+|++..+ + .|.+.|+++|.+ ++++|+.+++|.+|+. |..--+-.        ..
T Consensus       160 --d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~-g~~g~~G~G~~~~~~~~~  236 (401)
T d1fc4a_         160 --DMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAV-GFVGENGRGSHEYCDVMG  236 (401)
T ss_dssp             --CHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTT-TTSSTTSCCHHHHTTCTT
T ss_pred             --ChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhhhhHHHHHHhhcCcEEEehhhhcc-ccccCCCCccchhccCCC
Confidence              3445554443210 0112467777666 3 799999999976 6999999999999998 75543211        13


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEeCCC
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVRRKS  302 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~  302 (311)
                      ++|++++++.| -+|++. -|++.-+++.
T Consensus       237 ~~dii~~tl~K-a~gg~~-Gg~v~g~~~~  263 (401)
T d1fc4a_         237 RVDIITGTLGK-ALGGAS-GGYTAARKEV  263 (401)
T ss_dssp             CCSEEEEESSS-TTCSSS-CEEEEECHHH
T ss_pred             CCeEEEeeccc-ccccCC-cccccCCHHH
Confidence            69999999999 554342 4555544443

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=98.49  E-value=1.5e-06  Score=82.27  Aligned_cols=154  Identities=13%  Similarity=0.044  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCC-CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCCCc
Q 021539          127 PEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYP-FFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWLDL  205 (311)
Q Consensus       127 ~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~-~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~~g  205 (311)
                      ..++..+.+|+|+|.+  .  .++.+++..|+..++..+. ..+++.|+..-.+|...+ .-++..+.++...+-+    
T Consensus        91 ~h~~LE~~lA~~~g~e--~--all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~-~g~~ls~a~~~~f~Hn----  161 (396)
T d2bwna1          91 YHRRLEAEIAGLHQKE--A--ALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMI-EGIKRNAGPKRIFRHN----  161 (396)
T ss_dssp             HHHHHHHHHHHHTTCS--E--EEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHH-HHHHHSCCCEEEECTT----
T ss_pred             HHHHHHHHHHHHhCCC--c--eeeeecchHHHHHHHHHHhcccCCCceeehhhhhhccc-hhhhccccCceEeecc----
Confidence            4468899999999994  2  4444555555555555442 246777776666664433 3344557787777653    


Q ss_pred             ccCHHHHHhhhhccCCCCCceEEEEecc--cccchhcHHHHHH-HHHCCcEEEecccccCccCcccC---------CCCC
Q 021539          206 RIKGSQLSQNFRRKCKYTPKGLFSYPVV--VNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLA---------LALH  273 (311)
Q Consensus       206 ~id~~~L~~~l~~~~~~~~t~LVs~~~~--~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pld---------l~~l  273 (311)
                        |.++++++++...+ ....+|++..+  ..|.+-|+.+|.+ ++++|+.++||-||++ |..--+         +. .
T Consensus       162 --d~~~l~~l~~~~~~-~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~-Gv~G~~G~G~~~~~~~~-~  236 (396)
T d2bwna1         162 --DVAHLRELIAADDP-AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAV-GMYGPRGAGVAERDGLM-H  236 (396)
T ss_dssp             --CHHHHHHHHHHSCT-TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT-TTSSTTSCCHHHHHTCG-G
T ss_pred             --hHHHhhhHHhhhcc-cCceeEEEEeeccCcccccccHhHHHHhhhhcceeeeccceee-eeeccccccchhhcCCc-e
Confidence              35566666664322 23467777776  3899999999966 5889999999999999 876422         22 3


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEE
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLV  298 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~v  298 (311)
                      .+|+++.|+=| -||   +.|+++.
T Consensus       237 ~~di~~gTlsK-a~g---~~Gg~v~  257 (396)
T d2bwna1         237 RIDIFNGTLAK-AYG---VFGGYIA  257 (396)
T ss_dssp             GCSEEEEESSS-TTC---SCCEEEE
T ss_pred             eeeeeeecccc-ccc---ccccccc
Confidence            58999999999 777   3444444

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=98.39  E-value=2.3e-06  Score=78.90  Aligned_cols=163  Identities=15%  Similarity=0.139  Sum_probs=101.1

Q ss_pred             HHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHCG------LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~Lg------a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||++++      ++++  +|++|+|+++++.++..++ ..+|+.|+.. ..+. . ....++..|.++..+|.+.
T Consensus        75 ~lR~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~v~~~~P~y~-~-~~~~~~~~g~~~~~v~~~~  149 (403)
T d1wsta1          75 PLRLALARWMEKRYDIPMSKV--EIMTVAGSQQALDLIGRVF-LNPGDPIVVEAPTYL-A-AIQAFKYYDPEFISIPLDD  149 (403)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTC--EEEEESSHHHHHHHHHHHH-CCTTCEEEEEESCCH-H-HHHHHHTTCCEEEEEEEET
T ss_pred             HHHHHHHHHHHHHhCCCCChH--HeeecccchHHHHHHHHHH-hhcCCccccCCCcch-h-hhHHHhhccccceeEeecc
Confidence            67888888863      5544  5999999999999999987 3688988633 2222 1 2233456689999998764


Q ss_pred             CCcccCHHHHH---hhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cC--ccc
Q 021539          203 LDLRIKGSQLS---QNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GE--DQL  268 (311)
Q Consensus       203 ~~g~id~~~L~---~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~--~pl  268 (311)
                      . + .+...+.   .....+.+ ....++.++  ++-||..++.+++   .+ |+++++++++|-+..-.   |.  .++
T Consensus       150 ~-~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~  226 (403)
T d1wsta1         150 K-G-MRVDLLEEKLEELRKQGK-RVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPI  226 (403)
T ss_dssp             T-E-ECHHHHHHHHHHHHHTTC-CCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCG
T ss_pred             c-C-Cccccccccchhhhhccc-cccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcc
Confidence            2 2 1222222   11221111 112333332  2358999998765   33 58999999999877521   11  111


Q ss_pred             -CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          269 -ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       269 -dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                       .+...+.-+++.|+.| +++ | -.+|+++..++.
T Consensus       227 ~~~~~~~~~i~~~S~SK-~~~-~G~RiG~~i~~~~~  260 (403)
T d1wsta1         227 KHFDDYGRVIYLGTFSK-ILA-PGFRIGWVAAHPHL  260 (403)
T ss_dssp             GGGCSSSCEEEEEESTT-TTC-GGGCCEEEEECHHH
T ss_pred             cccCCCCcEEEEccccc-eec-CcccccccccchHH
Confidence             1223456788999999 776 5 368988876543

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.34  E-value=8.4e-06  Score=76.78  Aligned_cols=160  Identities=13%  Similarity=0.025  Sum_probs=106.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcCh---HHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEES---DYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~---~~~~~la~~~G~~V~~  197 (311)
                      +|....-.+...+++|.+=|+.   +.++|.||. .|+..+.. + .++|++|+....-..   ..+.....+.|+++.+
T Consensus        44 ~R~~nPt~~~le~~la~LE~~~---~a~~fsSGM-aAisall~-l-l~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~  117 (380)
T d1ibja_          44 TRSGNPTRDALESLLAKLDKAD---RAFCFTSGM-AALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKR  117 (380)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS---EEEEESSHH-HHHHHHHT-T-SCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEE
T ss_pred             eCCCChHHHHHHHHHHHHcCCc---eEEehhhHH-HHHHHHHH-h-hCCCCEEEEEecccccccchhhhhhccccccccc
Confidence            4444444567778899999984   236666665 56766543 3 468999875433221   1223334556999888


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccC-ccCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLV-FGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv-~G~~pldl~~l  273 (311)
                      +...      +.+.++++++++     +++|-+-  .+-+..+.||+.|++ ||++|++++||-|-+- ....|++   +
T Consensus       118 ~d~~------~~~~~~~ai~~~-----t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~Pl~---~  183 (380)
T d1ibja_         118 VNTT------KLDEVAAAIGPQ-----TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE---L  183 (380)
T ss_dssp             ECTT------SHHHHHHHCCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG---T
T ss_pred             cCcc------hHHHHHHHhccC-----ccEEEeccccccccccccHHHHHHHHHHcCCeEEeeccccccccccccc---c
Confidence            7653      467888888765     6777653  235899999999977 6999999999999643 1344554   5


Q ss_pred             CCcEEEEccccCcCCCCC-ceEEEEEeC
Q 021539          274 RPDLVLCTLDNNTHAQPL-KITCLLVRR  300 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~-GiG~L~vr~  300 (311)
                      ++|+++-|+-|++-|.-- -.|++.+++
T Consensus       184 GaDiVvhS~TKyi~GhsDv~~G~v~~~~  211 (380)
T d1ibja_         184 GADIVMHSATKFIAGHSDVMAGVLAVKG  211 (380)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred             CCCEEEecccceeccccCccccccccch
Confidence            899999999994444211 245555554

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=98.33  E-value=9.8e-06  Score=77.33  Aligned_cols=178  Identities=10%  Similarity=-0.034  Sum_probs=112.8

Q ss_pred             chhHHHHhcCC-CCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC--h
Q 021539          106 PSRLLDILSKK-TSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE--S  181 (311)
Q Consensus       106 ~~~l~~~l~~~-ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~--~  181 (311)
                      +..+.+.+... ..| .+|....-.+...++||++=|+.   +.++|-||. .|+..++.++ .++||+|++...-.  .
T Consensus        36 ~~~~~~~~~~~~~~~~YsR~~nPT~~~LE~~la~LE~~~---~a~~~~SGm-aAi~~~~~~l-~~~gd~il~~~~~Yg~t  110 (421)
T d2ctza1          36 PEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGK---AALATASGH-AAQFLALTTL-AQAGDNIVSTPNLYGGT  110 (421)
T ss_dssp             HHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCS---EEEEESSHH-HHHHHHHHHH-CCTTCEEEECSCCCHHH
T ss_pred             HHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCCC---eEEEecChH-HHHHHHHHhh-cccccceeecCCcCCch
Confidence            44455555433 223 35555555667778899999984   236666665 5665555555 36899998554422  1


Q ss_pred             -HHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEec
Q 021539          182 -DYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLD  257 (311)
Q Consensus       182 -~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvD  257 (311)
                       ..+..+..+.|+++.++..+.     ..+..+..++++     |++|-+-  .+-+..+.||+.|++ ||++|+.++||
T Consensus       111 ~~l~~~~~~~~gi~~~~~d~~~-----~~~~~~~~~~~~-----t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvD  180 (421)
T d2ctza1         111 FNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEK-----TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVD  180 (421)
T ss_dssp             HHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred             hHHHHHHHhhccccceeccccc-----CcchhccccCCC-----ceEEEEcCCCcceeEecchHHHHHHHHhcCCceEec
Confidence             223445677899998875431     234555666654     6777653  335899999999976 69999999999


Q ss_pred             ccccCc--cCcccCCCCCCCcEEEEccccCcCCCCCce-EEEEEeCC
Q 021539          258 ATGLVF--GEDQLALALHRPDLVLCTLDNNTHAQPLKI-TCLLVRRK  301 (311)
Q Consensus       258 AaQsv~--G~~pldl~~l~~Dfl~~S~HK~l~G~P~Gi-G~L~vr~~  301 (311)
                      -|=+.+  ...|++   +++|+++-|+-|++-|.=--+ |+++.+++
T Consensus       181 nT~a~tP~~~~Pl~---~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~  224 (421)
T d2ctza1         181 NTFGMGGYLLRPLA---WGAALVTHSLTKWVGGHGAVIAGAIVDGGN  224 (421)
T ss_dssp             CGGGGGGTSCCGGG---GTCSEEEEETTTTTTCSSCCCCEEEEECSC
T ss_pred             ccccccceeccccc---cCCcEEEEechhhccCCCCeEEEEEEcCCc
Confidence            985420  233544   589999999999554422234 44544443

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=98.31  E-value=2.8e-06  Score=78.82  Aligned_cols=161  Identities=14%  Similarity=0.094  Sum_probs=104.7

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCC-C
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETW-L  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~-~  203 (311)
                      +.|+.||+++    |.+.+..+|++|+|+++++.++...+ ..+||.|+.. -.+. . ....++..|.+++.+|... .
T Consensus        74 ~LR~aia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~-~~~Gd~vlv~~P~y~-~-~~~~~~~~g~~~v~v~~~~~~  150 (395)
T d1xi9a_          74 ELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGAL-LDPGDEILVPGPSYP-P-YTGLVKFYGGKPVEYRTIEEE  150 (395)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCH-H-HHHHHHHTTCEEEEEEEEGGG
T ss_pred             HHHHHHHHhhhhcccccccccccccccccchhhhhhhhhh-cCCCCEEEEcCCccc-c-chhhhhhcCCEEEEEeccccc
Confidence            5677777765    44433345999999999999998887 4688988632 2222 2 2234556689988887542 2


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHH----HHHCCcEEEecccccCccCc--c---cCCCC
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGED--Q---LALAL  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~--p---ldl~~  272 (311)
                      +..++.+.+++.+.++     ++++.+  +++=||.+++-+++.+    |++++++++.|.+-.-....  .   ..+..
T Consensus       151 ~~~~d~~~~~~~~~~~-----~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  225 (395)
T d1xi9a_         151 DWQPDIDDIRKKITDR-----TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTK  225 (395)
T ss_dssp             TSEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCS
T ss_pred             cccchHHHHHHhhccc-----ccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCC
Confidence            4468899998888764     344443  3446999999876632    57899999999986531111  1   11111


Q ss_pred             CCCcEEEEccccCcCCCCCc--eEEEEEeC
Q 021539          273 HRPDLVLCTLDNNTHAQPLK--ITCLLVRR  300 (311)
Q Consensus       273 l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~  300 (311)
                      ..-=+++.|+-| .||.| |  +|++++..
T Consensus       226 ~~~vi~~~S~SK-~~~~~-GlRvG~~~~~~  253 (395)
T d1xi9a_         226 DVPVIVMNGLSK-VYFAT-GWRLGYMYFVD  253 (395)
T ss_dssp             SSCEEEEEESTT-TTCCG-GGCCEEEEEEC
T ss_pred             CCCEEEEeCcch-hcccc-hhhcEeeEecC
Confidence            111267779999 87744 6  88887643

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=1.9e-05  Score=74.44  Aligned_cols=160  Identities=12%  Similarity=0.034  Sum_probs=105.4

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~  197 (311)
                      +|....-.+...+++|++=|+.   + .+.++++-.|+..++.++ .++|++|+.... +.  ...+..+..+.|+++.+
T Consensus        45 ~R~~nPt~~~le~~la~LEgg~---~-a~~~sSGMaAi~~~l~~l-~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~  119 (384)
T d1cs1a_          45 SRRGNPTRDVVQRALAELEGGA---G-AVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF  119 (384)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS---E-EEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHhCCC---c-eEEecChHHHHHHHHhhc-ccccceecccccccchhhhhhhhhhccccccccc
Confidence            4444445567788899999973   2 444555555777666665 478999875432 22  22334555666888887


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEEecccccC-ccCcccCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVLLDATGLV-FGEDQLALALH  273 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv-~G~~pldl~~l  273 (311)
                      +...      |.+.++..++++     +++|-+-  .+-+..+.||+.|++ +|++|+.++||.|=+- ....|++   +
T Consensus       120 ~d~~------d~~~~~~~~~~~-----t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~---~  185 (384)
T d1cs1a_         120 VDQG------DEQALRAALAEK-----PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLA---L  185 (384)
T ss_dssp             ECTT------CHHHHHHHHHTC-----CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGG---G
T ss_pred             ccCC------CHHHHHhhcccc-----ccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccccccc---c
Confidence            7542      467888888876     4666553  235899999999976 6999999999999543 0334443   5


Q ss_pred             CCcEEEEccccCcCCCCCceEEEEEe
Q 021539          274 RPDLVLCTLDNNTHAQPLKITCLLVR  299 (311)
Q Consensus       274 ~~Dfl~~S~HK~l~G~P~GiG~L~vr  299 (311)
                      ++|+++-|+=|++-|.=--+|..++.
T Consensus       186 GaDiVvhS~TKyi~Ghsdv~~G~vv~  211 (384)
T d1cs1a_         186 GADLVLHSCTKYLNGHSDVVAGVVIA  211 (384)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred             CCCEEEEccccccccCCCcccccccC
Confidence            89999999999544421124444433

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=98.25  E-value=3.5e-05  Score=72.90  Aligned_cols=167  Identities=16%  Similarity=0.114  Sum_probs=109.6

Q ss_pred             cchhHHHHhcCC-CCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC-
Q 021539          105 EPSRLLDILSKK-TSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE-  180 (311)
Q Consensus       105 ~~~~l~~~l~~~-ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~-  180 (311)
                      ....+.+.+.++ ..| .+|....-.+...++||++-|+.  .  .+.++++..|+..++.++ .++||+|+.... +. 
T Consensus        44 ~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LEgg~--~--a~~~sSGMaAi~~~l~~l-~~~Gd~iv~~~~~Yg~  118 (398)
T d1qgna_          44 KTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAE--S--TLLMASGMCASTVMLLAL-VPAGGHIVTTTDCYRK  118 (398)
T ss_dssp             SHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCS--E--EEEESCHHHHHHHHHHHH-SCSSCEEEEETTSCHH
T ss_pred             CHHHHHHHhcCCcCCceecCCCChHHHHHHHHHHHHhCCc--e--EEEecCcchHHHHHHhhc-ccccccccccccccch
Confidence            344566666443 444 36666666677888899999983  2  566677777887777766 478999874433 22 


Q ss_pred             -hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHH-HhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HHHCCcEEE
Q 021539          181 -SDYIKGFAAQKESKVIAAPETWLDLRIKGSQL-SQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AHRNAWHVL  255 (311)
Q Consensus       181 -~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L-~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~~~g~~vl  255 (311)
                       ...+..+.++.|+++.++...      +.+.. +..++++     +++|-+-  .+-+..+.||+.|++ ||++|++++
T Consensus       119 t~~l~~~~~~~~gi~~~~~~~~------~~~~~~~~~~~~~-----t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~v  187 (398)
T d1qgna_         119 TRIFIETILPKMGITATVIDPA------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVC  187 (398)
T ss_dssp             HHHHHHHTGGGGTCEEEEECSS------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred             hhhhhccccccccccccccccc------chhhhhhhhcccc-----ceEEEccCccccccccchHHHHHHHHhhcCCEEE
Confidence             122344556679998887643      12333 3444443     6777553  224889999999976 699999999


Q ss_pred             ecccccC-ccCcccCCCCCCCcEEEEccccCcCCCCC
Q 021539          256 LDATGLV-FGEDQLALALHRPDLVLCTLDNNTHAQPL  291 (311)
Q Consensus       256 vDAaQsv-~G~~pldl~~l~~Dfl~~S~HK~l~G~P~  291 (311)
                      ||.|=+- ....|+   ++++|+++-|+=| .+|+-.
T Consensus       188 VDnT~atP~~~~Pl---~~GaDiVihS~TK-y~~Ghs  220 (398)
T d1qgna_         188 IDGTFATPLNQKAL---ALGADLVLHSATK-FLGGHN  220 (398)
T ss_dssp             EECTTTCTTTCCTT---TTTCSEEEECTTT-TTTCSS
T ss_pred             ecceeeccccCCch---hhCCCEEEEechh-hcCccc
Confidence            9998442 022333   3589999999999 555443

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=98.24  E-value=1.9e-05  Score=72.27  Aligned_cols=162  Identities=15%  Similarity=0.095  Sum_probs=100.9

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      +.|+.||+++    |++-+..+|++|+|+++++..++..+. .+|+.|+.. -.+. . ...+++..|..+..++.+..+
T Consensus        68 ~LR~aia~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~-~~gd~V~i~~P~y~-~-~~~~~~~~g~~~~~~~~~~~~  144 (389)
T d2gb3a1          68 ELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA-NPGDEILVLEPFYA-N-YNAFAKIAGVKLIPVTRRMEE  144 (389)
T ss_dssp             HHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCT-H-HHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCcccceEEecccccccccccccccc-cCCCeEEEeCCCCc-c-ccccccccCcccccccccccc
Confidence            5777777765    443233359999999999999998873 678887522 2222 1 122334458888888876544


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCcccC---C-CCCC
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQLA---L-ALHR  274 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pld---l-~~l~  274 (311)
                      ...+.+.+...+.++     ++++.++  ++-||+.++.+++   .+ |++++++++.|-+.......+-.   . ...+
T Consensus       145 ~~~~~~~~~~~~~~~-----~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~  219 (389)
T d2gb3a1         145 GFAIPQNLESFINER-----TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESD  219 (389)
T ss_dssp             TSCCCTTGGGGCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCT
T ss_pred             ccchhhhhhhhcccC-----ccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccc
Confidence            444444444444443     4555543  3369999997655   33 58899999999876531111111   1 1123


Q ss_pred             CcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          275 PDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      -.+++.|.-| -++.| |  +|.++..++
T Consensus       220 ~~~v~~s~sK-~~~~~-GlRiG~~~~~~~  246 (389)
T d2gb3a1         220 KVVVIDSVSK-KFSAC-GARVGCLITRNE  246 (389)
T ss_dssp             TEEEEEESTT-TTTCG-GGCCEEEECSCH
T ss_pred             cccccccccc-cccCc-ccceeeeeccch
Confidence            5677788889 66645 5  798887653

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=98.19  E-value=3.4e-06  Score=78.44  Aligned_cols=165  Identities=17%  Similarity=0.162  Sum_probs=102.2

Q ss_pred             HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCC
Q 021539          130 QARNRALKHC----G---LSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETW  202 (311)
Q Consensus       130 ~aR~~IA~~L----g---a~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~  202 (311)
                      +.|+.||+++    |   ++++  +|++|+|+++|+.+++..+ ..+||.|+...-..... ...++..|.++..+|.+.
T Consensus        84 ~LR~aia~~~~~~~g~~~~~~~--~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~~~-~~~~~~~g~~~~~~~~~~  159 (420)
T d1vp4a_          84 VLKQQILKLLERMYGITGLDED--NLIFTVGSQQALDLIGKLF-LDDESYCVLDDPAYLGA-INAFRQYLANFVVVPLED  159 (420)
T ss_dssp             HHHHHHHHHHHHHHCCCSCCGG--GEEEEEHHHHHHHHHHHHH-CCTTCEEEEEESCCHHH-HHHHHTTTCEEEEEEEET
T ss_pred             HHHHHHHHHHHHHhCCCCCCHH--HeEeccchhhhHHHHHHhh-hccccccccccccccch-hHHHHHHhhhcccccccc
Confidence            5778787775    3   3444  5999999999999999887 36899986432222222 334566799999999864


Q ss_pred             CCcccCHHHHHhhhhc---cCC-CCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc--cCccc--
Q 021539          203 LDLRIKGSQLSQNFRR---KCK-YTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF--GEDQL--  268 (311)
Q Consensus       203 ~~g~id~~~L~~~l~~---~~~-~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~--G~~pl--  268 (311)
                       + .++.+.+...+..   ..+ ...+.++.++  ++=||.+++.+++   .+ |+++++++++|-+-.-.  .....  
T Consensus       160 -~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~  237 (420)
T d1vp4a_         160 -D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDP  237 (420)
T ss_dssp             -T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCC
T ss_pred             -c-ccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCccccc
Confidence             3 3677766544321   100 0113444443  2359999887655   33 58999999999985420  11100  


Q ss_pred             --CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          269 --ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       269 --dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                        .....+.-++..|+-| +++ | -.+|.++..++.
T Consensus       238 ~~~~~~~~~~i~~~s~sk-~~~-~G~RiG~~~~~~~~  272 (420)
T d1vp4a_         238 IFKIGGPERVVLLNTFSK-VLA-PGLRIGMVAGSKEF  272 (420)
T ss_dssp             HHHHHCTTTEEEEEESTT-TTC-GGGCEEEEECCHHH
T ss_pred             ccccccccceeEEecccc-ccc-cccccccccccchh
Confidence              1112345577778888 665 4 258888776544

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=98.13  E-value=9.5e-06  Score=74.89  Aligned_cols=163  Identities=9%  Similarity=0.072  Sum_probs=100.0

Q ss_pred             HHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539          130 QARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPETWL-  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~~~~-  203 (311)
                      +.|+.||+++    |.+.+..+|+.|+|+++++.+++.++ ..+||.|+... .+. .. ....+..|.+.+.++.... 
T Consensus        70 ~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~al~~~~~~~-~~pgd~vi~~~p~~~-~~-~~~~~~~g~~~v~~~~~~~~  146 (394)
T d1c7na_          70 EYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREF-TKPGDGVIIITPVYY-PF-FMAIKNQERKIIECELLEKD  146 (394)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCT-HH-HHHHHTTTCEEEECCCEEET
T ss_pred             HHHHHHHHHHHHhcCCCCCCcceEeeccchhhhhhhhccc-cccccccccccCccc-ch-hhHHhhhhhccccccccccc
Confidence            5677777776    54433346999999999999998887 47899986432 222 21 2223445776666654321 


Q ss_pred             -CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---cCcccCCC--
Q 021539          204 -DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---GEDQLALA--  271 (311)
Q Consensus       204 -~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---G~~pldl~--  271 (311)
                       ...++.+.++.++..+    .++++.++  ++=||++++.+++   .+ |+++++++++|-+..-.   +.......  
T Consensus       147 ~~~~~d~~~~~~~~~~~----~~~~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~  222 (394)
T d1c7na_         147 GYYTIDFQKLEKLSKDK----NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSI  222 (394)
T ss_dssp             TEEECCHHHHHHHHTCT----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred             ccccchhhhhhhhhccc----cceEEEecccccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhh
Confidence             2346777777766532    24555543  3469999998775   23 58999999999875420   10001111  


Q ss_pred             ---CCCCcEEEEccccCcCCCC-CceEEEEEeC
Q 021539          272 ---LHRPDLVLCTLDNNTHAQP-LKITCLLVRR  300 (311)
Q Consensus       272 ---~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~  300 (311)
                         ....-+++.|+=| .||.| -.+|.+++.+
T Consensus       223 ~~~~~~~~i~~~s~SK-~~~~~G~R~g~~~~~~  254 (394)
T d1c7na_         223 DEQLADKTITFTAPSK-TFNIAGMGMSNIIIKN  254 (394)
T ss_dssp             CHHHHTTEEEEECSHH-HHTCGGGCCEEEECCC
T ss_pred             hcccccceeecccccc-cccccccccccccccC
Confidence               1134577788899 77643 2356666554

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=7.2e-06  Score=76.45  Aligned_cols=163  Identities=11%  Similarity=0.064  Sum_probs=101.4

Q ss_pred             HHHHHHHHHc----CCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----GLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.||+++    |.+-+ ..+|++|+|+++|+.+++..+ ..+|+.|+.. ...+.  ...++...|.+++.++....
T Consensus        68 ~LReaia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l-~~~g~~vlv~~p~~~~--y~~~~~~~g~~~v~~~~~~~  144 (418)
T d1w7la_          68 PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQAL-VDEGDEVIIIEPFFDC--YEPMTMMAGGRPVFVSLKPG  144 (418)
T ss_dssp             HHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECEEC
T ss_pred             HHHHHHHHHHHHHhCCCCCcccceeeccCcHHHHHHHHHhh-ccCCceeeccccccch--hHHHHHHcCCEeeccccccc
Confidence            5677777665    65433 235999999999999999987 4678887633 22221  22334456777777664321


Q ss_pred             -----------CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCc---
Q 021539          204 -----------DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVF---  263 (311)
Q Consensus       204 -----------~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~---  263 (311)
                                 +..++.+++....+++     ++++.++  ++-||..++-+++   .+ |++++++++.|.+..-.   
T Consensus       145 ~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~  219 (418)
T d1w7la_         145 PIQNGELGSSSNWQLDPMELAGKFTSR-----TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYD  219 (418)
T ss_dssp             C---CCSEEGGGEECCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT
T ss_pred             cccccccccccCcccchhhhhcccccc-----ccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcC
Confidence                       2234555555544433     4555543  3369999988765   33 58899999999986431   


Q ss_pred             cCcccCCC---CC-CCcEEEEccccCcCCCC-CceEEEEEeCC
Q 021539          264 GEDQLALA---LH-RPDLVLCTLDNNTHAQP-LKITCLLVRRK  301 (311)
Q Consensus       264 G~~pldl~---~l-~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~  301 (311)
                      +..+..+.   .. +--+++.|+-| .|+.| -.+|+++..++
T Consensus       220 ~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~pG~RvG~~v~~~~  261 (418)
T d1w7la_         220 GHQHISIASLPGMWERTLTIGSAGK-TFSATGWKVGWVLGPDH  261 (418)
T ss_dssp             TCCCCCGGGSTTTGGGEEEEEEHHH-HTTCGGGCCEEEECCHH
T ss_pred             CCCCCCHHHccccccccceecccCc-cccCCCCcccccccchh
Confidence            11222222   21 23688999999 77655 35899887654

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=98.09  E-value=2.3e-05  Score=72.80  Aligned_cols=164  Identities=10%  Similarity=-0.032  Sum_probs=103.4

Q ss_pred             HHHHHHHHHc----CCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----GLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.||+++    |.+-+ ..+|+.|+|+++|+.+++.++ ..+|+.|+.. ..+..  ....+...|.+++.++.+.+
T Consensus        70 ~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y~~--~~~~~~~~g~~~~~v~~~~~  146 (418)
T d2r5ea1          70 RLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGH-VDEGDEVIIIEPFFDC--YEPMVKAAGGIPRFIPLKPN  146 (418)
T ss_dssp             HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHH-CCTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhc-cccccceeccccccch--hhHHHHHcCCeEEEEEeccc
Confidence            5777777765    44322 235999999999999999987 4689998632 23331  22334556889888887532


Q ss_pred             C---------cccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCcc-
Q 021539          204 D---------LRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQ-  267 (311)
Q Consensus       204 ~---------g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~p-  267 (311)
                      +         ...+.+++.......     ++++.++  ++=||.+++-+++   .+ |++++++++.|.+....-..+ 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~  221 (418)
T d2r5ea1         147 KTGGTISSADWVLDNNELEALFNEK-----TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF  221 (418)
T ss_dssp             CCSSCEEGGGEECCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred             ccccchhhhhhhhhHHHHhhhhhcc-----ccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCC
Confidence            1         134556665555433     4555543  3359999998765   33 588999999999876411111 


Q ss_pred             --cC---CCC-CCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          268 --LA---LAL-HRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       268 --ld---l~~-l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                        ..   +.. ...-.++.|+=| .+|.| -.+|+++..++.
T Consensus       222 ~~~s~~~~~~~~~~~i~~~S~SK-~~~~pGlRiG~~~~~~~~  262 (418)
T d2r5ea1         222 EHIRICTLPGMWERTITIGSAGK-TFSLTGWKIGWAYGPEAL  262 (418)
T ss_dssp             CCCCGGGSTTTGGGEEEEEEHHH-HTTCGGGCCEEEESCHHH
T ss_pred             ccccccccccccceeeeeecCCc-cccCCCcccccccccchh
Confidence              11   111 123366778999 77645 248998876553

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=3.8e-05  Score=72.43  Aligned_cols=163  Identities=9%  Similarity=0.015  Sum_probs=105.9

Q ss_pred             chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC---hHHHHHHHHhCCcEEE
Q 021539          120 KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE---SDYIKGFAAQKESKVI  196 (311)
Q Consensus       120 ~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~---~~~~~~la~~~G~~V~  196 (311)
                      .+|....-.+...+++|++=|+.  .  .+.++++-.|+..++.++ .++||+|+....-.   ...+..+..+.|+++.
T Consensus        52 Y~R~~nPt~~~le~~la~LEg~~--~--a~~~~SGMaAi~~~l~~l-~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~  126 (391)
T d1cl1a_          52 YGRRGTLTHFSLQQAMCELEGGA--G--CVLFPCGAAAVANSILAF-IEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTS  126 (391)
T ss_dssp             CTTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEE
T ss_pred             eECCCChhHHHHHHHHHHHhCCc--c--EEEeccccceeeehhhcc-cCCCCeEEEecccccchhhhhhhcccccccccc
Confidence            45666666677888899999873  2  555666667777666655 46899987543322   1223444556799999


Q ss_pred             EEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHHH-HHH--CCcEEEecccccCccCcccCCC
Q 021539          197 AAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWISE-AHR--NAWHVLLDATGLVFGEDQLALA  271 (311)
Q Consensus       197 ~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~~-a~~--~g~~vlvDAaQsv~G~~pldl~  271 (311)
                      ++...      +.+.++++++++     +++|-+-.  +-+..+.||+.|++ +++  +|++++||-|=+- +. -++.-
T Consensus       127 ~~d~~------d~~~~~~~i~~~-----t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT~at-P~-~~~Pl  193 (391)
T d1cl1a_         127 WFDPL------IGADIVKHLQPN-----TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAA-GV-LFKAL  193 (391)
T ss_dssp             EECTT------CGGGGGGTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTT-TT-SSCGG
T ss_pred             cccCc------cccccccccccc-----cceeeecccCcccccccccHHHHHHHHhccCCcEEEEeccccc-hh-hhccc
Confidence            87653      345667777765     56766532  24888999999966 454  6999999999543 22 11222


Q ss_pred             CCCCcEEEEccccCcCCCCCceEEEEEeC
Q 021539          272 LHRPDLVLCTLDNNTHAQPLKITCLLVRR  300 (311)
Q Consensus       272 ~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~  300 (311)
                      ++++|+++-|.=|++-|.---+|..++.+
T Consensus       194 ~~GaDivvhS~TKy~~GhsdvlgG~vv~~  222 (391)
T d1cl1a_         194 DFGIDVSIQAATKYLVGHSDAMIGTAVCN  222 (391)
T ss_dssp             GGTCSEEEEETTTTTTCSSSCCCEEEEEC
T ss_pred             ccccceEEeecchhccccccccccceecc
Confidence            36899999999995555322244444443

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=98.08  E-value=2.8e-05  Score=71.68  Aligned_cols=150  Identities=8%  Similarity=-0.036  Sum_probs=98.8

Q ss_pred             HHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccC-cC--hHHHHHHHHhCCcEEEEEeCCCCCcccC
Q 021539          132 RNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIIS-EE--SDYIKGFAAQKESKVIAAPETWLDLRIK  208 (311)
Q Consensus       132 R~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~e-h~--~~~~~~la~~~G~~V~~vp~~~~~g~id  208 (311)
                      .+++|++-|+.   . .+.++++..|+..++.++ .++||+|+.... +.  ...+..+.++.|+++.+++..      +
T Consensus         4 E~~la~Leg~~---~-a~~~sSGMaAi~~~l~~l-l~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~------d   72 (331)
T d1pffa_           4 EGKIAKLEHAE---A-CAATASGMGAIAASVWTF-LKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA------V   72 (331)
T ss_dssp             HHHHHHHHTCS---E-EEEESSHHHHHHHHHHHH-CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT------S
T ss_pred             HHHHHHHhCCC---e-EEEECCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEeccc------c
Confidence            45788888873   2 444566677777666665 478999875433 22  122344566789999998764      3


Q ss_pred             HHHHHhhhhccCCCCCceEEEEec--ccccchhcHHHHH-HH-HHCCcEEEecccccCc-cCcccCCCCCCCcEEEEccc
Q 021539          209 GSQLSQNFRRKCKYTPKGLFSYPV--VVNGTRYSMHWIS-EA-HRNAWHVLLDATGLVF-GEDQLALALHRPDLVLCTLD  283 (311)
Q Consensus       209 ~~~L~~~l~~~~~~~~t~LVs~~~--~~tG~i~Pi~~I~-~a-~~~g~~vlvDAaQsv~-G~~pldl~~l~~Dfl~~S~H  283 (311)
                      .+.++++++++     +++|-+-.  +-+..+.|+..+. .+ |++|++++||-|=+-+ ...|++   +++|+++-|.=
T Consensus        73 ~~~~~~~i~~~-----t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~pl~---~GaDiVv~S~T  144 (331)
T d1pffa_          73 PGNIEKHLKPN-----TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLD---LGVDIVVHSAT  144 (331)
T ss_dssp             TTHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGG---GTCSEEEEETT
T ss_pred             hhhHhhhcccc-----cceeeeecccccccccccchhhhhhhhcccCceEEeeccccccccccccc---cCCCEEEecch
Confidence            56788888765     56665532  2478899998774 44 6789999999874420 345554   57999999999


Q ss_pred             cCcCCCCCc-eEEEEEeC
Q 021539          284 NNTHAQPLK-ITCLLVRR  300 (311)
Q Consensus       284 K~l~G~P~G-iG~L~vr~  300 (311)
                      |++-|.--- .|+++.++
T Consensus       145 Ky~~Gh~d~~~G~v~~~~  162 (331)
T d1pffa_         145 KYINGHTDVVAGLVCSRA  162 (331)
T ss_dssp             TTTSSSSSCCCEEEEECH
T ss_pred             hhcCCCCccccccccccc
Confidence            954442222 35555553

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=98.04  E-value=0.0001  Score=69.40  Aligned_cols=176  Identities=6%  Similarity=-0.054  Sum_probs=112.9

Q ss_pred             chhHHHHhcCC-CCc-chhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC---
Q 021539          106 PSRLLDILSKK-TSF-KGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE---  180 (311)
Q Consensus       106 ~~~l~~~l~~~-ss~-~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~---  180 (311)
                      ...+.+.+... ..| .+|....-.+...+++|++=|+.  .  .+.++++-.|+..++.++ .++|++|+....-.   
T Consensus        37 ~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~~--~--a~~~sSGmaAi~~~~l~l-~~~gd~vv~~~~~yg~t  111 (394)
T d1e5ea_          37 CQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--A--CVATSSGMGAIAATVLTI-LKAGDHLISDECLYGCT  111 (394)
T ss_dssp             HHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--E--EEEESSHHHHHHHHHHHH-CCTTCEEEEESCCCHHH
T ss_pred             HHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCCc--c--eeeeccchHHHHHHHHhh-cccccccccccceeehh
Confidence            34455555433 333 35665555667788899999884  2  444555556777666665 36899987543322   


Q ss_pred             hHHHHHHHHhCCcEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH-HH-HHCCcEEEe
Q 021539          181 SDYIKGFAAQKESKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS-EA-HRNAWHVLL  256 (311)
Q Consensus       181 ~~~~~~la~~~G~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~-~a-~~~g~~vlv  256 (311)
                      .........+.|+++.++...      +.+.++++++++     +++|-+-  .+-+..+.|++.+. .+ |++|++++|
T Consensus       112 ~~~~~~~~~~~gi~~~~~d~~------d~~~~~~~i~~~-----t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvv  180 (394)
T d1e5ea_         112 HALFEHALTKFGIQVDFINTA------IPGEVKKHMKPN-----TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIA  180 (394)
T ss_dssp             HHHHHTHHHHTTCEEEEECTT------STTHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEE
T ss_pred             hHhHHHHhhccceeeeccCCC------CHHHHHHhhccc-----ccEEEEeccCCcceeeehhhhhhhccccccCeEEEe
Confidence            223344566789999998764      245778888775     5676553  22488999999874 45 567999999


Q ss_pred             cccccC-ccCcccCCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          257 DATGLV-FGEDQLALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       257 DAaQsv-~G~~pldl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      |-|=+- .-..|+   ++++|+++-|.=| .+++-..  .|+++.+++
T Consensus       181 DnT~atP~~~~Pl---~~GaDiVvhS~TK-y~~GhsDv~~G~v~~~~~  224 (394)
T d1e5ea_         181 DNTFCSPMITNPV---DFGVDVVVHSATK-YINGHTDVVAGLICGKAD  224 (394)
T ss_dssp             ECTTTCTTTCCGG---GGTCSEEEEETTT-TTTCSSCCCCEEEEECHH
T ss_pred             cCcccCcccCCch---hcCCCEEEechhh-hcCCCcccccccccchhh
Confidence            988432 023344   3589999999999 4442322  466666543

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.04  E-value=2.1e-05  Score=70.93  Aligned_cols=153  Identities=16%  Similarity=0.072  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHcCC---CCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCCCCC
Q 021539          129 IQARNRALKHCGL---SEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       129 e~aR~~IA~~Lga---~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      .+.|+.||++++.   +++  +|++|+|+++++.+++..     ||.|+.. -.+. . ....++..|+++..+|.+. +
T Consensus        59 ~~Lr~aia~~~~~~~v~~d--~I~it~G~~~~l~~l~~~-----~d~v~i~~P~y~-~-~~~~~~~~g~~~v~v~~~~-~  128 (334)
T d2f8ja1          59 EELIEKILSYLDTDFLSKN--NVSVGNGADEIIYVMMLM-----FDRSVFFPPTYS-C-YRIFAKAVGAKFLEVPLTK-D  128 (334)
T ss_dssp             HHHHHHHHHHHTCSSCCGG--GEEEEEHHHHHHHHHHHH-----SSEEEECSSCCH-H-HHHHHHHHTCCEEECCCCT-T
T ss_pred             HHHHHHHHHHhcccCCCcc--eEEecCcchhHHHHHhhh-----cccccccccccc-c-cccchhccCCccccccccc-c
Confidence            3689999999874   444  499999999999998765     3676532 2221 1 2233444599999999875 4


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHHHHHHHCCcEEEecccccCccCc--ccCCCCCCCcEEEE
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGED--QLALALHRPDLVLC  280 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~~--pldl~~l~~Dfl~~  280 (311)
                      +...     +...++     ++++.+  +++-||.+++.+++.+++++++++++|-+..-....  .......+.-+++.
T Consensus       129 ~~~~-----~~~~~~-----~~~l~l~nP~NPtG~~~s~~~l~~~~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~  198 (334)
T d2f8ja1         129 LRIP-----EVNVGE-----GDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIR  198 (334)
T ss_dssp             SCCC-----CCCCCT-----TEEEEEESSCTTTCCCCCHHHHHHHHTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEE
T ss_pred             cccc-----cccccc-----ceEEEecccccccceeecHHHhhccccceeEEeecccchhhcccccccccccCceEEEEe
Confidence            4332     112222     345444  344699999999998888889999998654320111  11122233458888


Q ss_pred             ccccCcCCCC-CceEEEEEeCCC
Q 021539          281 TLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       281 S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                      |+-| .+|.| -.+|.++..+++
T Consensus       199 S~SK-~~~~~G~R~G~~~~~~~~  220 (334)
T d2f8ja1         199 TFSK-AFSLAAQRVGYVVASEKF  220 (334)
T ss_dssp             ESTT-TSSCTTTCEEEEEECHHH
T ss_pred             cCcc-ccchhhhhhhhcccchHH
Confidence            9999 77755 258888876543

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=98.03  E-value=0.00011  Score=66.73  Aligned_cols=182  Identities=10%  Similarity=0.017  Sum_probs=110.0

Q ss_pred             hhHHHHhcCC-CCcchhhhhHHHHHHHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEc-cCcC
Q 021539          107 SRLLDILSKK-TSFKGNFISIPEIQARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTI-ISEE  180 (311)
Q Consensus       107 ~~l~~~l~~~-ss~~G~~~~~~le~aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~-~eh~  180 (311)
                      +++.+.+.+. ..|+...-.   .+.|+.+++++    |.+.+..+|++|+|+++|+.+++..+. .+|+.|+.. -.+.
T Consensus        48 ~~~~~~~~~~~~~Y~~~~G~---~~lR~aia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~-~~gd~vlv~~P~y~  123 (375)
T d1o4sa_          48 EEAVRFLQKGEVKYTDPRGI---YELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL-DPGDEVIVFSPVWV  123 (375)
T ss_dssp             HHHHHHHTTCCCCCCCTTCC---HHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC-CTTCEEEEEESCCT
T ss_pred             HHHHHHHhcCCcCCCCCcCC---HHHHHHHHhhhhhccccccccccccccCcHHHHHHHHHHHHh-CCCCEEEEccCccc
Confidence            4455555432 345422211   25666666665    343334469999999999999999873 688887532 2222


Q ss_pred             hHHHHHHHHhCCcEEEEEeCCCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHH---H-HHHCCcE
Q 021539          181 SDYIKGFAAQKESKVIAAPETWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWIS---E-AHRNAWH  253 (311)
Q Consensus       181 ~~~~~~la~~~G~~V~~vp~~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~---~-a~~~g~~  253 (311)
                      . . .......|..+..++.... +...+.+.++....++     ++++.++  ++=||..++.+++.   + |++++++
T Consensus       124 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~  196 (375)
T d1o4sa_         124 S-Y-IPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK-----TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFY  196 (375)
T ss_dssp             T-H-HHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCE
T ss_pred             c-c-hhhhhccccccccccccccccccchhHHHHHhhccC-----ccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCc
Confidence            1 1 1223345777777665432 3445666666655543     4555543  44699999987753   3 5889999


Q ss_pred             EEecccccCccCcc---cC----CCCCCCcEEEEccccCcCCCC-CceEEEEEeCC
Q 021539          254 VLLDATGLVFGEDQ---LA----LALHRPDLVLCTLDNNTHAQP-LKITCLLVRRK  301 (311)
Q Consensus       254 vlvDAaQsv~G~~p---ld----l~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~  301 (311)
                      ++.|.+... ....   ..    ....+-=+++.|+=| .||.| -.+|.++..++
T Consensus       197 ii~De~y~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~l~G~R~G~~~~~~~  250 (375)
T d1o4sa_         197 IISDEVYDS-LVYTDEFTSILDVSEGFDRIVYINGFSK-SHSMTGWRVGYLISSEK  250 (375)
T ss_dssp             EEEECTTTT-SBCSSCCCCHHHHCSSSTTEEEEEESTT-TTTCGGGCCEEEECCHH
T ss_pred             eehHhhhcc-ccccccccccccccCCCCCEEEEeechh-hccCCcccccccccccc
Confidence            999997664 2111   11    122345688899999 78744 24788776543

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=9.3e-05  Score=67.70  Aligned_cols=164  Identities=11%  Similarity=0.029  Sum_probs=106.0

Q ss_pred             HHHHHHHHHc----CCCCC-CCeEEEeCCHHHHHHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCCCC
Q 021539          130 QARNRALKHC----GLSED-EYLVLFVPNYKEAMLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPETWL  203 (311)
Q Consensus       130 ~aR~~IA~~L----ga~~d-ey~VvFTsnaTealnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~~~  203 (311)
                      +.|+.||+++    |.+.+ +.+|+.|+|+++++.+++..+. .+|+.|+. ......  ........|..+..++.+..
T Consensus        67 ~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~-~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~  143 (382)
T d1u08a_          67 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV-RNGDEVICFDPSYDS--YAPAIALSGGIVKRMALQPP  143 (382)
T ss_dssp             HHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC-CTTCEEEEEESCCTT--HHHHHHHTTCEEEEEECCTT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEeccchHHHHHHHHhhcc-cccceEEEecccccc--hhhhhhhccccceecccccc
Confidence            6788888765    55432 2259999999999999998874 67888753 233331  12233456888888887665


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEE-e-cccccchhcHHHHHH----HHHCCcEEEecccccCccCcc---cCCCC--
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSY-P-VVVNGTRYSMHWISE----AHRNAWHVLLDATGLVFGEDQ---LALAL--  272 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~-~-~~~tG~i~Pi~~I~~----a~~~g~~vlvDAaQsv~G~~p---ldl~~--  272 (311)
                      ...+|.+++++.+.++     ++++.+ + ++-||++++.+++.+    +.++++.++.|..-...-..+   .....  
T Consensus       144 ~~~~d~~~l~~~~~~~-----~~~i~l~~P~NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~  218 (382)
T d1u08a_         144 HFRVDWQEFAALLSER-----TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHP  218 (382)
T ss_dssp             TCCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSH
T ss_pred             cccCCHHHHhhhhccC-----ccEEEECCCCcccccccccccchhhhhhhccccceeeeecchhhccccccccccccccc
Confidence            6678899998887765     344444 3 336999999877643    356888988888755311111   11100  


Q ss_pred             --CCCcEEEEccccCcCCCC-CceEEEEEeCCC
Q 021539          273 --HRPDLVLCTLDNNTHAQP-LKITCLLVRRKS  302 (311)
Q Consensus       273 --l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~  302 (311)
                        .+--++..|.=| .++.| -.+|.++..++.
T Consensus       219 ~~~~~~i~~~s~SK-~~~~pG~RiG~~v~~~~~  250 (382)
T d1u08a_         219 QLRERAVAVSSFGK-TYHMTGWKVGYCVAPAPI  250 (382)
T ss_dssp             HHHTTEEEEEEHHH-HTTCGGGCCEEEECCHHH
T ss_pred             cccCcEEEEeeccc-cccCCcccchhhhccchh
Confidence              112378888889 77755 358888776543

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.85  E-value=0.00012  Score=68.91  Aligned_cols=156  Identities=12%  Similarity=0.050  Sum_probs=101.5

Q ss_pred             hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEEEEccCcC---hHHHHHHHHhCCcEEEE
Q 021539          121 GNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYYLTIISEE---SDYIKGFAAQKESKVIA  197 (311)
Q Consensus       121 G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~Ils~~eh~---~~~~~~la~~~G~~V~~  197 (311)
                      +|....-.+...++++++-|+.   +-++|-||. .|+..+...  +.+||+|+....-.   ...+..+..+.|+++.+
T Consensus        50 sR~gnPT~~~lE~~la~LE~~~---~a~~~sSGm-aAi~~~l~~--l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~  123 (393)
T d1n8pa_          50 SRSQNPNRENLERAVAALENAQ---YGLAFSSGS-ATTATILQS--LPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSF  123 (393)
T ss_dssp             TTTCCHHHHHHHHHHHHHTTCS---EEEEESCHH-HHHHHHHHT--SCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred             eCCCChHHHHHHHHHHHHhCCc---eEEEecCch-hHHHhhhhc--ccCCCeeeeeeeecccchhhhhhhhhcccceeEE
Confidence            4554555567778899999873   236666664 567665543  35789987543322   22334445667888877


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHHHH-HH----HCCcEEEecccccC-ccCcccC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWISE-AH----RNAWHVLLDATGLV-FGEDQLA  269 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I~~-a~----~~g~~vlvDAaQsv-~G~~pld  269 (311)
                      +..       +.++++++++++     +++|-+-  .+-+..+.||+.|++ +|    ++|++++||-|=+- ....|++
T Consensus       124 ~~~-------~~~~~~~~i~~~-----t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~  191 (393)
T d1n8pa_         124 TND-------LLNDLPQLIKEN-----TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLN  191 (393)
T ss_dssp             ESS-------HHHHHHHHSCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGG
T ss_pred             eec-------chHHHHHHhhhh-----cceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccCCchh
Confidence            642       235788888875     5777653  234889999999976 56    68999999999432 1344554


Q ss_pred             CCCCCCcEEEEccccCcCCCCCc-eEEEEE
Q 021539          270 LALHRPDLVLCTLDNNTHAQPLK-ITCLLV  298 (311)
Q Consensus       270 l~~l~~Dfl~~S~HK~l~G~P~G-iG~L~v  298 (311)
                         +++|+++-|+=| .+|+-.. +|..++
T Consensus       192 ---~GADiVvhS~TK-yi~GhsDv~~G~v~  217 (393)
T d1n8pa_         192 ---FGADIVVHSATK-YINGHSDVVLGVLA  217 (393)
T ss_dssp             ---GTCSEEEEETTT-TTTCSSCCCCEEEE
T ss_pred             ---hCCCEEEEcccc-ccCCCCccccceee
Confidence               589999999999 4443322 444443

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=9.3e-05  Score=70.68  Aligned_cols=163  Identities=9%  Similarity=-0.041  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcCCCCCCCEE-EEccCcCh--HHHHHHHHhCCcEEEEEeCCCCC
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESYPFFKGNYY-LTIISEES--DYIKGFAAQKESKVIAAPETWLD  204 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~~~~~Gd~I-ls~~eh~~--~~~~~la~~~G~~V~~vp~~~~~  204 (311)
                      +.+-+..++++.|.+.-.  .-.-.|+|.....+.......+.+.+ ++...|+.  ..+...++-.|++|+.+|.+. +
T Consensus       110 l~e~q~~l~eltGmd~~n--~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~-~  186 (437)
T d1wyua1         110 TFEYQTMIAELAGLEIAN--ASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEG-G  186 (437)
T ss_dssp             HHHHHHHHHHHHTSSEEC--SCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBT-T
T ss_pred             HHHHHHHHHHhhCCCccc--cCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeeccc-c
Confidence            458888999999985211  11224666544332222212233444 45555552  334555667799999999864 3


Q ss_pred             cccCHHHHHhhhhccCCCCCceEEEEec-ccccchhcHHHHHH-HHHCCcEEEecccccCccCcccCCCCCCCcEEEEcc
Q 021539          205 LRIKGSQLSQNFRRKCKYTPKGLFSYPV-VVNGTRYSMHWISE-AHRNAWHVLLDATGLVFGEDQLALALHRPDLVLCTL  282 (311)
Q Consensus       205 g~id~~~L~~~l~~~~~~~~t~LVs~~~-~~tG~i~Pi~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~~Dfl~~S~  282 (311)
                      + .+.+    .+.++     +.-|.++. +..|.+.++++|.. +|+.|.++++|+.... -..-.+-.++++|++++++
T Consensus       187 ~-~~~~----~~~~~-----~Aavmi~~Pnt~G~~ed~~~i~~~~h~~G~l~~~~ad~~a-l~~l~~Pg~~GaDi~~g~~  255 (437)
T d1wyua1         187 R-TPLP----EVGEE-----VGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLS-LGVLKPPGAYGADIAVGDG  255 (437)
T ss_dssp             B-CCCC----CCCTT-----EEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTG-GGTBCCHHHHTCSEEEEEC
T ss_pred             c-chhh----hhccc-----eeEEEEccccccccccchHHHHHHhhhccceEEeeechhh-hhccccccccccceEeecc
Confidence            2 2222    13332     33333332 25899999999966 6999999888887654 2222344557999999995


Q ss_pred             ccC----cCCCCCceEEEEEeCCCCcc
Q 021539          283 DNN----THAQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       283 HK~----l~G~P~GiG~L~vr~~~~~~  305 (311)
                      |+.    -||+| |.|++.+++++...
T Consensus       256 q~fg~p~g~GGP-~~G~~a~~~~l~r~  281 (437)
T d1wyua1         256 QSLGLPMGFGGP-HFGFLATKKAFVRQ  281 (437)
T ss_dssp             TTTTCCCGGGCS-CCEEEEECGGGGGG
T ss_pred             ceeccccCCCcC-ccccccccchhhcc
Confidence            541    23334 67999999876554

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.0019  Score=60.12  Aligned_cols=163  Identities=13%  Similarity=0.016  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC--------CCC-CCCEEEEcc-CcC---hHHHH---HHH
Q 021539          125 SIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY--------PFF-KGNYYLTII-SEE---SDYIK---GFA  188 (311)
Q Consensus       125 ~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~--------~~~-~Gd~Ils~~-eh~---~~~~~---~la  188 (311)
                      ....+.+.+.++++.+.+    .+.|+.++|||+..+++..        ... ....+++.. ..|   ...+.   ...
T Consensus        82 ~~~~~~~~~~~~~~~~~~----~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~  157 (404)
T d2byla1          82 NNVLGEYEEYITKLFNYH----KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPT  157 (404)
T ss_dssp             ESSHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHH
T ss_pred             cchHHHHHHhhhhccccc----ccccccCccccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcc
Confidence            334456667788887662    4999999999987654321        011 123454333 233   11110   001


Q ss_pred             HhCC-----cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEe
Q 021539          189 AQKE-----SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLL  256 (311)
Q Consensus       189 ~~~G-----~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlv  256 (311)
                      .+.+     ..+..+|.+      +.+++++.+..+    ....|.+ +.+ ..|.+.|    ++.|.+ |+++|+++++
T Consensus       158 ~~~~~~p~~~~~~~~p~~------d~~~l~~~l~~~----~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~  227 (404)
T d2byla1         158 SYDGFGPFMPGFDIIPYN------DLPALERALQDP----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIA  227 (404)
T ss_dssp             HHTTSCSCCTTEEEECTT------CHHHHHHHHTST----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred             cccCCCCCCCCeeEeccc------CHHHHHHhcCCC----CeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEe
Confidence            1112     234455653      467888888643    2344444 333 4787777    777865 6999999999


Q ss_pred             cccccCccCcccC----CCCCCCcEEEEccccCcCCC--CCceEEEEEeCCCCcc
Q 021539          257 DATGLVFGEDQLA----LALHRPDLVLCTLDNNTHAQ--PLKITCLLVRRKSFDT  305 (311)
Q Consensus       257 DAaQsv~G~~pld----l~~l~~Dfl~~S~HK~l~G~--P~GiG~L~vr~~~~~~  305 (311)
                      |=+|.-.|..---    .-...||+++++  |++-|+  |  +|+++++++..+.
T Consensus       228 DEV~tGfgR~G~~~a~~~~gv~PDi~~~g--K~l~gG~~p--~~av~~~~~i~~~  278 (404)
T d2byla1         228 DEIQTGLARTGRWLAVDYENVRPDIVLLG--KALSGGLYP--VSAVLCDDDIMLT  278 (404)
T ss_dssp             ECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSC--CEEEEECHHHHTT
T ss_pred             eccccccccccccchhhhcCCCCCEEEEC--chhhCCCcc--ceeeeechhhhhc
Confidence            9999721433211    112458999776  756553  4  7889998776554

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=96.93  E-value=0.0027  Score=58.61  Aligned_cols=145  Identities=14%  Similarity=0.107  Sum_probs=83.9

Q ss_pred             CeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh---HHH-----HHHHHhC---CcEEEEEeCCCCCcccCHHHH
Q 021539          146 YLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES---DYI-----KGFAAQK---ESKVIAAPETWLDLRIKGSQL  212 (311)
Q Consensus       146 y~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~---~~~-----~~la~~~---G~~V~~vp~~~~~g~id~~~L  212 (311)
                      ..|.||.++|||+..+++. ..+.....|++.. .+|.   ..+     .......   -..+..+|.+      |.+.|
T Consensus        97 ~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~~------d~~~l  170 (387)
T d1vefa1          97 NRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYN------DVEAL  170 (387)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTT------CHHHH
T ss_pred             eeeccccCchHHHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCCC------CHHHH
Confidence            4599999999998775542 1122234565433 3441   111     0000010   1235556654      46788


Q ss_pred             HhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcccCCC----CCCCcEEEEc
Q 021539          213 SQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLALA----LHRPDLVLCT  281 (311)
Q Consensus       213 ~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~~Dfl~~S  281 (311)
                      ++.+.++     ..-|.+ +.+ ..|.+.|    +++|.+ |+++|+++++|=+|+-.|..-.-+.    ...||+++++
T Consensus       171 ~~~~~~~-----iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~~g  245 (387)
T d1vefa1         171 KRAVDEE-----TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLA  245 (387)
T ss_dssp             HHHCCTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC
T ss_pred             HHhcCCC-----eEEEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceeeec
Confidence            8888654     344444 333 4688877    778865 6999999999999972255433222    2569999987


Q ss_pred             cccCcC-CCCCceEEEEEeCCCCcc
Q 021539          282 LDNNTH-AQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       282 ~HK~l~-G~P~GiG~L~vr~~~~~~  305 (311)
                        |++- |+|  ++++..+++..+.
T Consensus       246 --K~l~gG~~--~~~~~~~~~~~~~  266 (387)
T d1vefa1         246 --KALGGGVP--LGVAVMREEVARS  266 (387)
T ss_dssp             --GGGGTTSS--CEEEEEEHHHHHT
T ss_pred             --ccCCCCcc--ccccccceeeeec
Confidence              5333 335  4666666655443

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=96.48  E-value=0.0053  Score=56.10  Aligned_cols=169  Identities=11%  Similarity=-0.094  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcC------CCCCCCEEEE-ccCcChHHHHHHHHhCCcEE
Q 021539          129 IQARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESY------PFFKGNYYLT-IISEESDYIKGFAAQKESKV  195 (311)
Q Consensus       129 e~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~------~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V  195 (311)
                      .+.|+.|++++.-      .++...++.|++.|.++......+      ...+||.|+. .-... +. ....+..|.+.
T Consensus        77 p~lreaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~-~y-~~~~~~~G~~~  154 (412)
T d1ajsa_          77 AEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWE-NH-NGVFTTAGFKD  154 (412)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCT-HH-HHHHHHTTCSC
T ss_pred             HHHHHHHHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcch-hh-HHHHHHcCCeE
Confidence            3688888888732      234434667888887776544432      1468998863 22222 21 12234457653


Q ss_pred             -EEEeCCC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCcc
Q 021539          196 -IAAPETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQ  267 (311)
Q Consensus       196 -~~vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~p  267 (311)
                       ...+... .....+.+.+++.+....+  .+.++.+  +++=||.+++-+++   .+ |++++++++.|-+..-.....
T Consensus       155 v~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~  232 (412)
T d1ajsa_         155 IRSYRYWDTEKRGLDLQGFLSDLENAPE--FSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGN  232 (412)
T ss_dssp             EEEEECEETTTTEECHHHHHHHHHHSCT--TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSC
T ss_pred             EEeecccccccccccHHHHHHHHHhccC--CcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCC
Confidence             3333321 1335677776666553221  2344443  34569999997665   33 589999999998765311111


Q ss_pred             c---------CCCCCCCcEEEEccccCcCCCCC-ceEEEEEeCCC
Q 021539          268 L---------ALALHRPDLVLCTLDNNTHAQPL-KITCLLVRRKS  302 (311)
Q Consensus       268 l---------dl~~l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~  302 (311)
                      .         ........+++.|+=| -++.|- .+|.+++....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~s~sk-~~~~~G~R~G~~~~~~~~  276 (412)
T d1ajsa_         233 LEKDAWAIRYFVSEGFELFCAQSFSK-NFGLYNERVGNLTVVAKE  276 (412)
T ss_dssp             HHHHTHHHHHHHHTTCCEEEEEECTT-TSCCGGGCEEEEEEECSS
T ss_pred             cccchhhhhhhhhhcccccccccccc-cccCCCCCccccccchhH
Confidence            0         0112234566667777 454341 48988887654

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=96.32  E-value=0.0036  Score=58.83  Aligned_cols=148  Identities=7%  Similarity=-0.023  Sum_probs=86.9

Q ss_pred             HHHHHHHHc----CCCCCCCeEEEeCCHHHHHHHHHhcCC-------CCCCCEEEEccCcChHHHHHHHHhCCcEEEEEe
Q 021539          131 ARNRALKHC----GLSEDEYLVLFVPNYKEAMLMIGESYP-------FFKGNYYLTIISEESDYIKGFAAQKESKVIAAP  199 (311)
Q Consensus       131 aR~~IA~~L----ga~~dey~VvFTsnaTealnlv~~s~~-------~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp  199 (311)
                      .|+.|+++.    |+..++..|+++.|+||+++.++.++.       ..+|++|+...=....+ ...++-.+.+...++
T Consensus       105 L~~~i~~lh~~~gna~t~~~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y-~~~~~~~~~~~~~~~  183 (425)
T d2hoxa1         105 LEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF-REQTKYFDKKGYVWA  183 (425)
T ss_dssp             HHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH-HHHHHHSCBTTEEEE
T ss_pred             HHHHHHHHHhhhCCCCCCCCEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccH-HHHHHHcCCCCCccC
Confidence            444444432    454456679999999999999988763       45788887433222221 111222232221222


Q ss_pred             CCCCCcccCHHHHHhhhhccCCCCCceEEE--EecccccchhcHHHHHHHHHCCcEEEecccccCccC-cccCCCCCCCc
Q 021539          200 ETWLDLRIKGSQLSQNFRRKCKYTPKGLFS--YPVVVNGTRYSMHWISEAHRNAWHVLLDATGLVFGE-DQLALALHRPD  276 (311)
Q Consensus       200 ~~~~~g~id~~~L~~~l~~~~~~~~t~LVs--~~~~~tG~i~Pi~~I~~a~~~g~~vlvDAaQsv~G~-~pldl~~l~~D  276 (311)
                             +|.+.+++.++++     ++++.  -+.+=||.+.      ++..+++.++.|-+=.. .+ .++. ....-+
T Consensus       184 -------~D~~~~~~~~~~~-----~~ii~l~sPnNPtG~l~------~~v~~~~~~I~DEaY~~-~~f~~~~-~~~~~~  243 (425)
T d2hoxa1         184 -------GNAANYVNVSNPE-----QYIEMVTSPNNPEGLLR------HAVIKGCKSIYDMVYYW-PHYTPIK-YKADED  243 (425)
T ss_dssp             -------EEGGGGTTCSCGG-----GEEEEEESSCTTTCCCC------CCSSTTCEEEEECTTCS-TTTSCCC-SCBCCS
T ss_pred             -------CCHHHHHhhCCCC-----ceEEEEECCCCCCcchh------hhhhhCCEEEEeccccC-ccccchh-hhcCCe
Confidence                   2444555556554     34433  3444689752      23346888999987543 22 2222 224568


Q ss_pred             EEEEccccCcCCCCCc--eEEEEEeCC
Q 021539          277 LVLCTLDNNTHAQPLK--ITCLLVRRK  301 (311)
Q Consensus       277 fl~~S~HK~l~G~P~G--iG~L~vr~~  301 (311)
                      +++.|+=| .||.| |  +|.+++.++
T Consensus       244 Ivl~S~SK-~fgla-GlRiGw~i~~~~  268 (425)
T d2hoxa1         244 ILLFTMSK-FTGHS-GSRFGWALIKDE  268 (425)
T ss_dssp             EEEEEHHH-HTSCG-GGCCEEEEECCH
T ss_pred             EEEEeCHH-hccCc-chheeeEEeCCH
Confidence            99999999 99854 6  798887754

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=96.07  E-value=0.011  Score=53.72  Aligned_cols=167  Identities=5%  Similarity=-0.116  Sum_probs=95.8

Q ss_pred             HHHHHHHHHcCC------CCCCCeEEEe--CCHHHH---HHHHHhcCCCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEE
Q 021539          130 QARNRALKHCGL------SEDEYLVLFV--PNYKEA---MLMIGESYPFFKGNYYLT-IISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       130 ~aR~~IA~~Lga------~~dey~VvFT--snaTea---lnlv~~s~~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      +.|+.|++++.-      +++.  |+-|  .+++.+   +..++..+ ..+||.|+. .-....  ....++..|.+++.
T Consensus        75 ~lr~aia~~~~~~~~~~~~~~~--i~~~~~~~~~g~~~~~~~~~~~l-~~pGd~Vlv~~P~y~~--y~~~~~~~g~~~~~  149 (401)
T d7aata_          75 DFTRASAELALGENSEAFKSGR--YVTVQGISGTGSLRVGANFLQRF-FKFSRDVYLPKPSWGN--HTPIFRDAGLQLQA  149 (401)
T ss_dssp             HHHHHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHH-CTTCCEEEEEESCCTT--HHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHhccCCcccCcCc--eEEeccchHHHHHHHHHHhhHhh-cCCCceEEEecCCCcc--hhhHHHHcCCeEEE
Confidence            678888887643      2233  5444  344444   44445554 468999862 222221  12234556999999


Q ss_pred             EeCCC-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCccc--
Q 021539          198 APETW-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQL--  268 (311)
Q Consensus       198 vp~~~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pl--  268 (311)
                      +|... .+...+.+.+.+.+....+  +++++.+  +++=||.+++.+++   .+ |++++++++.|-+-.-....+.  
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~  227 (401)
T d7aata_         150 YRYYDPKTCSLDFTGAMEDISKIPE--KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINR  227 (401)
T ss_dssp             EECEETTTTEECHHHHHHHHTTSCT--TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHH
T ss_pred             EeccccccccccHHHHHHHHhcCCC--ceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCccc
Confidence            98743 2445677777777754221  2445443  34459999998765   33 5899999999997653111110  


Q ss_pred             C------CCCCCC-cEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          269 A------LALHRP-DLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       269 d------l~~l~~-Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                      +      +..... -+++.|+-| -++.| ..+|++++.....+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~s~sk-~~~~~G~RiG~~~~~~~~~~  270 (401)
T d7aata_         228 DAWALRHFIEQGIDVVLSQSYAK-NMGLYGERAGAFTVICRDAE  270 (401)
T ss_dssp             HTHHHHHHHHTTCCCEEEEECTT-TSCCGGGCEEEEEEECSSHH
T ss_pred             chhhhhhhhhhhcccceeEeccc-cceeeccccceeecchHHHH
Confidence            0      111112 245567777 55533 14899998876543

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=96.07  E-value=0.027  Score=52.22  Aligned_cols=160  Identities=13%  Similarity=0.060  Sum_probs=90.2

Q ss_pred             HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhc-CCCCCCCEEEEcc-CcCh--H-HH----HHHHHhCCc-------
Q 021539          130 QARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGES-YPFFKGNYYLTII-SEES--D-YI----KGFAAQKES-------  193 (311)
Q Consensus       130 ~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s-~~~~~Gd~Ils~~-eh~~--~-~~----~~la~~~G~-------  193 (311)
                      ...+.+.++..-   ...+.|+.++|||+..++.- ..+...+.|++.. .+|.  . .+    .... ..+.       
T Consensus        96 ~la~~~~~~~~~---~~~v~f~~sGseA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~-~~~~p~~~~~~  171 (427)
T d2gsaa_          96 VLAEMVNDAVPS---IEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVA-TLGLPSSPGVP  171 (427)
T ss_dssp             HHHHHHHHHSTT---CSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHH-HTTCCSCSSSC
T ss_pred             HHHHHHHhhCCc---cccccccCCcHHHHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCccc-ccCCCCCCCCc
Confidence            445566666543   23589999999998876552 1112334565432 3441  0 00    0000 1111       


Q ss_pred             -----EEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEeccccc
Q 021539          194 -----KVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGL  261 (311)
Q Consensus       194 -----~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQs  261 (311)
                           .+...|.      -+.+++++++++..  .....|.+ +.+ ..|.+.|    ++.|.+ |+++|+++++|=+|.
T Consensus       172 ~~~~~~~~~~~~------~~~~~le~~~~~~~--~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~t  243 (427)
T d2gsaa_         172 KKTTANTLTTPY------NDLEAVKALFAENP--GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMT  243 (427)
T ss_dssp             HHHHTTEEEECT------TCHHHHHHHHTTST--TTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             ccCccceeccCc------chHHHHHHHHHhCC--CCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccc
Confidence                 2222222      25788888887532  12344444 333 4688888    888866 699999999999996


Q ss_pred             CccCcccC---CCCCCCcEEEEccccCcC-CCCCceEEEEEeCCCCcc
Q 021539          262 VFGEDQLA---LALHRPDLVLCTLDNNTH-AQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       262 v~G~~pld---l~~l~~Dfl~~S~HK~l~-G~P~GiG~L~vr~~~~~~  305 (311)
                      -.+....-   --...||+++++= . +- |+|  +|+++.+++..+.
T Consensus       244 G~r~g~~~~~~~~gi~PDi~~~gK-~-lggG~p--~~a~~~~~~i~~~  287 (427)
T d2gsaa_         244 GFRIAYGGVQEKFGVTPDLTTLGK-I-IGGGLP--VGAYGGKREIMQL  287 (427)
T ss_dssp             BTTTBTTCHHHHTTCCCSEEEECG-G-GGTTSC--CEEEEECHHHHTT
T ss_pred             cceecccchHHhcCCCHHHHhhhh-c-cCCCcc--eeeeeehHHHHHH
Confidence            31222211   1124699999985 3 44 335  4667777766554

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=96.03  E-value=0.064  Score=49.10  Aligned_cols=180  Identities=12%  Similarity=0.075  Sum_probs=94.4

Q ss_pred             HHHHhcCCCCcchhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhcC---------CCCCCCEEEEcc-C
Q 021539          109 LLDILSKKTSFKGNFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGESY---------PFFKGNYYLTII-S  178 (311)
Q Consensus       109 l~~~l~~~ss~~G~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~s~---------~~~~Gd~Ils~~-e  178 (311)
                      +.+.+.+-+-.++.+.....+.+-+.+.++.+.+    .+.|+.++++|+...+...         .......+++.. .
T Consensus        64 i~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~  139 (404)
T d1z7da1          64 MINQAKNLTICSRAFFSVPLGICERYLTNLLGYD----KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNN  139 (404)
T ss_dssp             HHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC
T ss_pred             HHHHHHhCCCcccccchHHHHHHHHhhhhccccc----eeeeeccccchHHHHHHHHHHHHhhccccccccccccccccc
Confidence            4444443322222333445556667777887762    3899999999987543311         001112343222 2


Q ss_pred             cChHHHHHH--HHhCC---------cEEEEEeCCCCCcccCHHHHHhhhhccCCCCCceEEEE-ecc-cccchhc----H
Q 021539          179 EESDYIKGF--AAQKE---------SKVIAAPETWLDLRIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----M  241 (311)
Q Consensus       179 h~~~~~~~l--a~~~G---------~~V~~vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i  241 (311)
                      .|.......  .....         ..+..+|.+      +.+.+...+...    ....|.+ +.+ +.|.+.|    +
T Consensus       140 ~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~----~iAavi~EPi~g~~G~~~~~~~fl  209 (404)
T d1z7da1         140 FSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD------DLEALEEELKDP----NVCAFIVEPIQGEAGVIVPSDNYL  209 (404)
T ss_dssp             --------------------------CEEEECTT------CHHHHHHHHTST----TEEEEEECSSBSTTTSBCCCTTHH
T ss_pred             CCCCcccccccccccccccCCCCCCccccccccc------hHHHHHHHhcCC----CEEEEEEEEEcCCCCCccCCHHHH
Confidence            221110000  00000         112223332      345566555542    2444444 333 5788887    8


Q ss_pred             HHHHH-HHHCCcEEEecccccCccCcccC----CCCCCCcEEEEccccCcCCC-CCceEEEEEeCCCCcc
Q 021539          242 HWISE-AHRNAWHVLLDATGLVFGEDQLA----LALHRPDLVLCTLDNNTHAQ-PLKITCLLVRRKSFDT  305 (311)
Q Consensus       242 ~~I~~-a~~~g~~vlvDAaQsv~G~~pld----l~~l~~Dfl~~S~HK~l~G~-P~GiG~L~vr~~~~~~  305 (311)
                      +.|.+ |+++|+++++|=+|+-.|..---    .-...||.++++  |++-|+ + =+|+++++++..+.
T Consensus       210 ~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~g--K~l~gG~~-p~~~v~~~~~i~~~  276 (404)
T d1z7da1         210 QGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLG--KALSGGHY-PISAVLANDDIMLV  276 (404)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSS-CCEEEEECHHHHTT
T ss_pred             HHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEc--ccccCCCC-CcccccchHHHHcc
Confidence            88865 79999999999999622432211    112469999776  755543 2 17888998876554

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.017  Score=52.25  Aligned_cols=169  Identities=8%  Similarity=-0.050  Sum_probs=95.8

Q ss_pred             HHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhcC-CCCCCCEEEEc-cCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHCGL------SEDEYLVLFVPNYKEAMLMIGESY-PFFKGNYYLTI-ISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~Lga------~~dey~VvFTsnaTealnlv~~s~-~~~~Gd~Ils~-~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.+|+++.-      .++...++-|.+++.++.+....+ .+.+||.|+.+ .... + ....++..|.++..+|..
T Consensus        73 ~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~-~-y~~~~~~~g~~~~~~~~~  150 (396)
T d2q7wa1          73 EFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWP-N-HKSVFNSAGLEVREYAYY  150 (396)
T ss_dssp             HHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCT-H-HHHHHHHTTCEEEEEECE
T ss_pred             HHHHHHHHHHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCc-c-chHHHHHcCCeeEecccc
Confidence            688888887632      223323445677777766554432 13578888633 2222 1 123345569999988875


Q ss_pred             CCC-cccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCcc---c---
Q 021539          202 WLD-LRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQ---L---  268 (311)
Q Consensus       202 ~~~-g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~p---l---  268 (311)
                      .++ ...+...+.+......  .++.++.+  +++=||..++.+++   .+ |++++++++.|-+-.-.....   .   
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~  228 (396)
T d2q7wa1         151 DAENHTLDFDALINSLNEAQ--AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGL  228 (396)
T ss_dssp             ETTTTEECHHHHHHHHTTCC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHH
T ss_pred             cccccccccchHHHHHHHhc--cCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHh
Confidence            432 2345555555444321  12344443  34469999998765   33 589999999999866311110   0   


Q ss_pred             --CCCCCCCcEEEEccccCcCCCCC-ceEEEEEeCCCC
Q 021539          269 --ALALHRPDLVLCTLDNNTHAQPL-KITCLLVRRKSF  303 (311)
Q Consensus       269 --dl~~l~~Dfl~~S~HK~l~G~P~-GiG~L~vr~~~~  303 (311)
                        ..+.....+++.|+=| -|+.|. .+|.++......
T Consensus       229 ~~~~~~~~~~~~~~s~sk-~~~~~G~R~G~~~~~~~~~  265 (396)
T d2q7wa1         229 RAFAAMHKELIVASSYSK-NFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             HHHHHHCSCEEEEEECTT-TTTCGGGCCEEEEEECSSH
T ss_pred             hhhhhhcccccccccccc-cccccCCCccccccchhHH
Confidence              0011234466667777 555341 499999887654

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=95.75  E-value=0.046  Score=49.80  Aligned_cols=170  Identities=9%  Similarity=0.021  Sum_probs=96.9

Q ss_pred             HHHHHHHHHcCCC-----CCCCeEE-EeCCHHHHHHHHHhcC-CCCCCCEEEE-ccCcChHHHHHHHHhCCcEEEEEeCC
Q 021539          130 QARNRALKHCGLS-----EDEYLVL-FVPNYKEAMLMIGESY-PFFKGNYYLT-IISEESDYIKGFAAQKESKVIAAPET  201 (311)
Q Consensus       130 ~aR~~IA~~Lga~-----~dey~Vv-FTsnaTealnlv~~s~-~~~~Gd~Ils-~~eh~~~~~~~la~~~G~~V~~vp~~  201 (311)
                      +.|+.+++++.-.     .++..++ -|.+++.++.+++... ...+||.|+. ......  ....++..|.++..+|..
T Consensus        77 ~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~--y~~~~~~~g~~~~~~~~~  154 (412)
T d1yaaa_          77 SLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWAN--HMAIFENQGLKTATYPYW  154 (412)
T ss_dssp             HHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTT--HHHHHHTTTCCEEEEECE
T ss_pred             HHHHHHHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCch--hHHHHHHcCCceeccccc
Confidence            6788888876321     1221222 2345565554443221 1347898863 222221  122345568999888864


Q ss_pred             C-CCcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCccc------
Q 021539          202 W-LDLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQL------  268 (311)
Q Consensus       202 ~-~~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pl------  268 (311)
                      . .+...+.+.+.+.+...++  .+.++.+  +++=||+.++-+++   .+ |++++++++.|-+-.-......      
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~  232 (412)
T d1yaaa_         155 ANETKSLDLNGFLNAIQKAPE--GSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYA  232 (412)
T ss_dssp             ETTTTEECHHHHHHHHHHSCT--TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHH
T ss_pred             ccccccccchhhhcccccCCC--ceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhh
Confidence            3 2445677777777765432  2345444  23459999997655   33 5899999999988653111110      


Q ss_pred             ------CCCCCCCcEEEEccccCcCCCC-CceEEEEEeCCCCc
Q 021539          269 ------ALALHRPDLVLCTLDNNTHAQP-LKITCLLVRRKSFD  304 (311)
Q Consensus       269 ------dl~~l~~Dfl~~S~HK~l~G~P-~GiG~L~vr~~~~~  304 (311)
                            .......-+++.|+=| -||.| ..+|++++..+..+
T Consensus       233 ~~~~~~~~~~~~~~i~~~s~SK-~~~~~G~RiG~~~~~~~~~~  274 (412)
T d1yaaa_         233 VRLGVEKLSTVSPVFVCQSFAK-NAGMYGERVGCFHLALTKQA  274 (412)
T ss_dssp             HHHHHHHTTTTCCEEEEEECTT-TSCCGGGCEEEEEEECCSCT
T ss_pred             hhhhhhccccCCCeEEEEecCC-ccccCcCceEEEEEchhhhh
Confidence                  0111223477889999 66633 24999999887653

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=95.41  E-value=0.13  Score=48.60  Aligned_cols=165  Identities=12%  Similarity=-0.021  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEe---CCHHH---HHHHHHhcC---CC-CCCCEEEEccCcChHHHHHHHHhCCcEEEE
Q 021539          128 EIQARNRALKHCGLSEDEYLVLFV---PNYKE---AMLMIGESY---PF-FKGNYYLTIISEESDYIKGFAAQKESKVIA  197 (311)
Q Consensus       128 le~aR~~IA~~Lga~~dey~VvFT---snaTe---alnlv~~s~---~~-~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~  197 (311)
                      +-+=+.-|+++.|.+     |+=.   .++|.   |+.++.+-.   .- .....++....|+... .......+..++.
T Consensus       108 lfEfQtmi~eLTGMd-----vaNaS~yDGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  181 (471)
T d1wyub1         108 MWELGEYLKALTGMD-----AITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSN-PATASMAGYQVRE  181 (471)
T ss_dssp             HHHHHHHHHHHHTCS-----EEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHH-HHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHhCCC-----ccccccchHHHHHHHHHHHHHHHhhhcccccccccccCCcccccce-eeeeecccceeec
Confidence            347788899999984     4333   35543   444432210   00 1111223333344222 2223345777777


Q ss_pred             EeCCCCCcccCHHHHHhhhhccCCCCCceEEEEecc-cccchhc-HHHHHH-HHHCCcEEEecccccCccCcccCCCCCC
Q 021539          198 APETWLDLRIKGSQLSQNFRRKCKYTPKGLFSYPVV-VNGTRYS-MHWISE-AHRNAWHVLLDATGLVFGEDQLALALHR  274 (311)
Q Consensus       198 vp~~~~~g~id~~~L~~~l~~~~~~~~t~LVs~~~~-~tG~i~P-i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~~l~  274 (311)
                      ++.+. .+..+.+.+......+     +..+.+... ..|.+-+ ++++.+ +|+.|..+++|++..........-...+
T Consensus       182 ~~~~~-~~~~~~~~~~~~~~~~-----~a~v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~~~g  255 (471)
T d1wyub1         182 IPSGP-EGEVDLEALKRELGPH-----VAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMG  255 (471)
T ss_dssp             ECBCT-TSSBCHHHHHHHCSTT-----EEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHT
T ss_pred             ccccc-cccccchhhhhhhhcc-----ccceeeccCCCcccccchhhhhHHHHHhccccccccccchhhhhhccccCccc
Confidence            87764 5677888887776653     344444332 4676654 667765 6999999999887655121223334467


Q ss_pred             CcEEEEccccCcCCCC-----CceEEEEEeCCCCcc
Q 021539          275 PDLVLCTLDNNTHAQP-----LKITCLLVRRKSFDT  305 (311)
Q Consensus       275 ~Dfl~~S~HK~l~G~P-----~GiG~L~vr~~~~~~  305 (311)
                      .|.+++..|+ .||.|     .|.|++-++++....
T Consensus       256 ~div~vg~~q-~~G~P~~~GGP~~G~~a~~~~~~R~  290 (471)
T d1wyub1         256 FDVVHLNLHK-TFTVPHGGGGPGSGPVGVKAHLAPY  290 (471)
T ss_dssp             CSEEECCTTT-TTCCCCTTSCCCCCCEEECGGGGGG
T ss_pred             cccccccccc-ccccccccccccccceeehhhhhcc
Confidence            8999999999 44322     389999988876544

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.033  Score=50.28  Aligned_cols=168  Identities=12%  Similarity=-0.022  Sum_probs=96.5

Q ss_pred             HHHHHHHHHcCCCC----CCCeEEEeCCHHHH----HHHHHhcCCCCCCCEEEEcc-CcChHHHHHHHHhCCcEEEEEeC
Q 021539          130 QARNRALKHCGLSE----DEYLVLFVPNYKEA----MLMIGESYPFFKGNYYLTII-SEESDYIKGFAAQKESKVIAAPE  200 (311)
Q Consensus       130 ~aR~~IA~~Lga~~----dey~VvFTsnaTea----lnlv~~s~~~~~Gd~Ils~~-eh~~~~~~~la~~~G~~V~~vp~  200 (311)
                      +.|+.||+++.-..    +...|+-|.+++.+    +.++...+ +.+||.|+... ... +. ...++..|.++..+|.
T Consensus        74 ~lR~aia~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~-~~pgd~Vlv~~P~y~-~y-~~~~~~~G~~~~~v~~  150 (397)
T d3tata_          74 CYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKR-YFPESGVWVSDPTWE-NH-VAIFAGAGFEVSTYPW  150 (397)
T ss_dssp             HHHHHHHHHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHH-HCSSCCCEECSSCCT-TH-HHHHHTTTCCCEECCC
T ss_pred             HHHHHHHHHHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhh-cCCCCcceecccCcc-cc-HHHHHHcCCEEEEEec
Confidence            68999999876421    12236655555543    33333333 35788876321 111 11 2334556999999997


Q ss_pred             CCC-CcccCHHHHHhhhhccCCCCCceEEEEe--cccccchhcHHHH---HH-HHHCCcEEEecccccCccCc--c----
Q 021539          201 TWL-DLRIKGSQLSQNFRRKCKYTPKGLFSYP--VVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGED--Q----  267 (311)
Q Consensus       201 ~~~-~g~id~~~L~~~l~~~~~~~~t~LVs~~--~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~--p----  267 (311)
                      ..+ +...+.+.+.+.+....+  .+.++.++  ++=||..++.+++   .+ |++++++++.|-+-.-.-..  +    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~  228 (397)
T d3tata_         151 YDEATNGVRFNDLLATLKTLPA--RSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYA  228 (397)
T ss_dssp             CCTTTSSCCHHHHHHHHTTCCS--SCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHH
T ss_pred             chhhccccchHHHHHHhhhccc--ccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchh
Confidence            643 334566666666553221  23444432  4459999998765   23 58999999999886531111  0    


Q ss_pred             c--CCCCCCCcEEEEccccCcCCCCCc--eEEEEEeCCCCc
Q 021539          268 L--ALALHRPDLVLCTLDNNTHAQPLK--ITCLLVRRKSFD  304 (311)
Q Consensus       268 l--dl~~l~~Dfl~~S~HK~l~G~P~G--iG~L~vr~~~~~  304 (311)
                      +  ......-=+++.|+-| .+| ..|  +|+++......+
T Consensus       229 ~~~~~~~~~~~i~~~s~SK-~~~-~~G~RiG~~~~~~~~~~  267 (397)
T d3tata_         229 IRAIASAGLPALVSNSFSK-IFS-LYGERVGGLSVMCEDAE  267 (397)
T ss_dssp             HHHHHTTTCCCEECBCCHH-HHT-BTTTCCBCCEEECSSTT
T ss_pred             hhhhhhcCCceEEEecCcc-ccc-ccCccccccccchhHHH
Confidence            0  0011112377788889 676 335  798888776654

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=93.60  E-value=0.18  Score=46.22  Aligned_cols=177  Identities=14%  Similarity=0.070  Sum_probs=87.7

Q ss_pred             hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCCCCCCEEEEccC-cC--hHHHHHHHH-----h
Q 021539          122 NFISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPFFKGNYYLTIIS-EE--SDYIKGFAA-----Q  190 (311)
Q Consensus       122 ~~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~~~Gd~Ils~~e-h~--~~~~~~la~-----~  190 (311)
                      ........+.=+.+.+++.-+. .+.+.|+.++|||+..+++   .+.  ..+.|++..+ +|  ......+..     .
T Consensus        79 ~~~~~~~~~la~~l~~~~p~~~-~~~v~f~~sGseA~e~Alk~ar~~t--~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~  155 (425)
T d1sffa_          79 VLAYEPYLELCEIMNQKVPGDF-AKKTLLVTTGSEAVENAVKIARAAT--KRSGTIAFSGAYHGRTHYTLALTGKVNPYS  155 (425)
T ss_dssp             TEECHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHH--TCCEEEEETTCCCCSSHHHHHHSSCCTTTT
T ss_pred             cccCcHHHHHHHHHHhhhhhcc-cceeeeeccccchhhhHHHHhhhhh--cccceEeecCCCcCccccchhhcCCCCccc
Confidence            3444444555566777774332 2359999999999876544   332  2345665433 44  221111110     0


Q ss_pred             CC-----cEEEEEeCCCCCcccCHH----HHHhhhhccCCCCCceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEE
Q 021539          191 KE-----SKVIAAPETWLDLRIKGS----QLSQNFRRKCKYTPKGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHV  254 (311)
Q Consensus       191 ~G-----~~V~~vp~~~~~g~id~~----~L~~~l~~~~~~~~t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~v  254 (311)
                      .+     ......+...........    ...+.+..........-|.+ +.+ +.|.+.|    ++.|.+ |+++|+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gill  235 (425)
T d1sffa_         156 AGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIML  235 (425)
T ss_dssp             TTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEE
T ss_pred             CCcccccCCccccCCccccccccchhhHHHHHHHHHhcccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceE
Confidence            00     111222221111111111    11122211111112333333 333 4676654    344544 68999999


Q ss_pred             EecccccCccCcccC----CCCCCCcEEEEccccCcC-CCCCceEEEEEeCCCCcc
Q 021539          255 LLDATGLVFGEDQLA----LALHRPDLVLCTLDNNTH-AQPLKITCLLVRRKSFDT  305 (311)
Q Consensus       255 lvDAaQsv~G~~pld----l~~l~~Dfl~~S~HK~l~-G~P~GiG~L~vr~~~~~~  305 (311)
                      ++|=+|.-.|..-.-    .-...||+++++  |.+- |+|  +|+++++++..+.
T Consensus       236 I~DEV~tG~gR~g~~~a~~~~gv~PDi~~~g--K~l~gG~P--~~av~~~~~i~~~  287 (425)
T d1sffa_         236 IADEVQSGAGRTGTLFAMEQMGVAPDLTTFA--KSIAGGFP--LAGVTGRAEVMDA  287 (425)
T ss_dssp             EEECTTTTTTTTSSSSGGGGTTSCCSEEEEC--GGGGTSSC--CEEEEEEHHHHTT
T ss_pred             EeccccccCCCcchhhHHHhcCCCccceecc--cccCCCcc--eEEEEEcHHHHHh
Confidence            999999832432221    112579999976  7454 334  8999999876554

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=93.26  E-value=0.13  Score=47.16  Aligned_cols=64  Identities=14%  Similarity=0.199  Sum_probs=42.4

Q ss_pred             cccchhc----HHHHHH-HHHCCcEEEecccccCccCcccCCC----CCCCcEEEEccccCcC-CCCCceEEEEEeCC
Q 021539          234 VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQLALA----LHRPDLVLCTLDNNTH-AQPLKITCLLVRRK  301 (311)
Q Consensus       234 ~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~pldl~----~l~~Dfl~~S~HK~l~-G~P~GiG~L~vr~~  301 (311)
                      ..|.+.|    +++|.+ |+++|+++++|=+|.-.|..---+.    ...||+++++  |++- |+|  +|+++++++
T Consensus       213 ~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~g--K~l~gG~p--~~av~~~~~  286 (431)
T d1zoda1         213 SGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLS--KTLGAGLP--LAAIVTSAA  286 (431)
T ss_dssp             TTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSS--CEEEEECHH
T ss_pred             cCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhccc--cccccccc--cceeeeeec
Confidence            4677776    788865 6999999999999982254443222    2569999987  5444 335  344555543

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=92.62  E-value=0.11  Score=46.31  Aligned_cols=169  Identities=10%  Similarity=-0.049  Sum_probs=86.7

Q ss_pred             HHHHHHHHHcC---CCCCCCeEEEeCCHHHHHH--HHHhcCCCCCCCEEEEccCcChHHHHHHHHhCCcEEEEEeCCCC-
Q 021539          130 QARNRALKHCG---LSEDEYLVLFVPNYKEAML--MIGESYPFFKGNYYLTIISEESDYIKGFAAQKESKVIAAPETWL-  203 (311)
Q Consensus       130 ~aR~~IA~~Lg---a~~dey~VvFTsnaTealn--lv~~s~~~~~Gd~Ils~~eh~~~~~~~la~~~G~~V~~vp~~~~-  203 (311)
                      +-|+.|++++.   ........+.|.+++.+..  +....+ ..+|+.|+.+.=...+. ...++..|.+++.+|...+ 
T Consensus        73 ~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~gd~V~~p~p~~~~y-~~~~~~~g~~~v~~~~~~~~  150 (394)
T d2ay1a_          73 EFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARM-ANPDLRVFVSDPTWPNH-VSIMNFMGLPVQTYRYFDAE  150 (394)
T ss_dssp             HHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHH-HCTTCCEEEEESCCHHH-HHHHHHHTCCEEEEECEETT
T ss_pred             HHHHHHHHHHhccccccccccceeccCchHHHHHHHHHhhh-cCCceEEEEecccccch-HHHHHHcCCEEEEecccchh
Confidence            56777777652   1111123555666655543  333322 35788886332111222 2223445888888886432 


Q ss_pred             CcccCHHHHHhhhhccCCCCCceEEEE--ecccccchhcHHHH---HH-HHHCCcEEEecccccCccCccc---CC----
Q 021539          204 DLRIKGSQLSQNFRRKCKYTPKGLFSY--PVVVNGTRYSMHWI---SE-AHRNAWHVLLDATGLVFGEDQL---AL----  270 (311)
Q Consensus       204 ~g~id~~~L~~~l~~~~~~~~t~LVs~--~~~~tG~i~Pi~~I---~~-a~~~g~~vlvDAaQsv~G~~pl---dl----  270 (311)
                      ....+.+.+.+......+  .+.++.+  +++=||+.++.++.   .+ |++++++++.|-+-.-.....-   .+    
T Consensus       151 ~~~~~~~~~~~~~~~~~~--~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~  228 (394)
T d2ay1a_         151 TRGVDFEGMKADLAAAKK--GDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI  228 (394)
T ss_dssp             TTEECHHHHHHHHHTCCT--TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH
T ss_pred             cccccchhHHHHHhhccc--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhh
Confidence            334455666555543211  2445544  24459999997765   33 5899999999987643111100   00    


Q ss_pred             CCCCCc-EEEEccccCcCCCC-CceEEEEEeCCCC
Q 021539          271 ALHRPD-LVLCTLDNNTHAQP-LKITCLLVRRKSF  303 (311)
Q Consensus       271 ~~l~~D-fl~~S~HK~l~G~P-~GiG~L~vr~~~~  303 (311)
                      ...... +++.|+=| -++.| ..+|.+.+.....
T Consensus       229 ~~~~~~~~~~~s~sk-~~~~~G~R~G~~~~~~~~~  262 (394)
T d2ay1a_         229 ASRIPEVLIAASCSK-NFGIYRERTGCLLALCADA  262 (394)
T ss_dssp             HHHCSSEEEEEECTT-TTTCGGGCEEEEEEECSSH
T ss_pred             hhhcccccccccccc-cccCCcccccchhhchhHH
Confidence            001122 33445556 34322 2588888876654

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=85.50  E-value=4.7  Score=36.45  Aligned_cols=175  Identities=14%  Similarity=0.130  Sum_probs=86.3

Q ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---cCCC---CCCCEEEEcc-CcChHHH--HHHH-----
Q 021539          123 FISIPEIQARNRALKHCGLSEDEYLVLFVPNYKEAMLMIGE---SYPF---FKGNYYLTII-SEESDYI--KGFA-----  188 (311)
Q Consensus       123 ~~~~~le~aR~~IA~~Lga~~dey~VvFTsnaTealnlv~~---s~~~---~~Gd~Ils~~-eh~~~~~--~~la-----  188 (311)
                      .......+.-+++++....+  ...+.|+.+++||+..++.   .+..   ..+..|++.. .+|....  ..+.     
T Consensus        83 ~~~~~~~~l~~~l~~~~~~~--~~~v~f~~sGseA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~  160 (429)
T d1s0aa_          83 ITHAPAIELCRKLVAMTPQP--LECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNS  160 (429)
T ss_dssp             EECHHHHHHHHHHHHHSCTT--CCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTT
T ss_pred             ccchHHHHHHHHHHhhhccC--cceeeeccccccchhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccc
Confidence            33344445556677776654  2359999999999865443   1111   1224566443 3441111  0000     


Q ss_pred             -----HhCCcEEEEEeCCC--CCc---ccCHHHHHhhhhccCCCCCceEEEE-ecc-cc-cchh-c---HHHHHH-HHHC
Q 021539          189 -----AQKESKVIAAPETW--LDL---RIKGSQLSQNFRRKCKYTPKGLFSY-PVV-VN-GTRY-S---MHWISE-AHRN  250 (311)
Q Consensus       189 -----~~~G~~V~~vp~~~--~~g---~id~~~L~~~l~~~~~~~~t~LVs~-~~~-~t-G~i~-P---i~~I~~-a~~~  250 (311)
                           ..........|...  ...   ..+.+.+++.+....  .....|.+ +.+ .. |.+. |   ++.|.+ |+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~  238 (429)
T d1s0aa_         161 MHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR--HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE  238 (429)
T ss_dssp             TGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT--TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH
T ss_pred             cccccCccccccccccccccccccccchhhhhhhhhhhhhcC--CccceeeecceeccCCCccCCCHHHHHHHHHHHHHc
Confidence                 00011122222211  011   123445555554321  11333333 333 23 3443 3   456655 6899


Q ss_pred             CcEEEecccccCccCcccCC----CCCCCcEEEEccccCcCCCCCceEEEEEeCCCC
Q 021539          251 AWHVLLDATGLVFGEDQLAL----ALHRPDLVLCTLDNNTHAQPLKITCLLVRRKSF  303 (311)
Q Consensus       251 g~~vlvDAaQsv~G~~pldl----~~l~~Dfl~~S~HK~l~G~P~GiG~L~vr~~~~  303 (311)
                      |+++++|=+|.-.|..---+    -...||+++++  |++-|+=.-+|+++++++..
T Consensus       239 gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~g--K~l~gG~~p~~av~~~~~i~  293 (429)
T d1s0aa_         239 GILLIADEIATGFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSATLTTREVA  293 (429)
T ss_dssp             TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEEEEECHHHH
T ss_pred             Ccceehhhccccccccccccccccceecccccccc--cccccccccccchhhHHHHH
Confidence            99999999998324433221    12469999987  44533211278888887653

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.65  E-value=3.2  Score=38.00  Aligned_cols=58  Identities=12%  Similarity=0.151  Sum_probs=35.8

Q ss_pred             ceEEEE-ecc-cccchhc----HHHHHH-HHHCCcEEEecccccCccCcc--cCCCC----CCCcEEEEcccc
Q 021539          225 KGLFSY-PVV-VNGTRYS----MHWISE-AHRNAWHVLLDATGLVFGEDQ--LALAL----HRPDLVLCTLDN  284 (311)
Q Consensus       225 t~LVs~-~~~-~tG~i~P----i~~I~~-a~~~g~~vlvDAaQsv~G~~p--ldl~~----l~~Dfl~~S~HK  284 (311)
                      ...|.+ +.+ ..|.+.|    ++.|.+ |+++|+++++|=+|+-.|..-  .-.+.    ..||+++++  |
T Consensus       249 iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~g--K  319 (461)
T d1ohwa_         249 VAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--K  319 (461)
T ss_dssp             EEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEEC--G
T ss_pred             cceeeeccccccccccCchhhHHHHHHHHHHhhCcceeccccccccccccccccccccccccCchhhhhh--h
Confidence            444544 333 4676654    455654 689999999999997325332  11111    148999887  7