Citrus Sinensis ID: 021568

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MMMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIGA
cccccccEEEEEccccHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHcccccccEEEEEcccccccEEEEccHHHHHHHHHHHHHccccEEEcccccccccccccHHHHHHHHHHHHccccccccccEEEcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccccccccc
cccccccEEEEEcccccHEcccHHHHHHcHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccEEccccccEcccHHHHHHHHHHHHHccEEHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccccEEEccc
MMMARSLLLFYVLSQGAqavgmgkeaqsVPAAAELYKKANDILGFDLleictngpkekldstiisqpaiYVTSLAAVELLRARdggqqiidsvdvtcglslGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIAnylcpgnyavsggvKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATqintprmpvisnvdaqphadpEVIKKILAQQVTSPVQWETTVKTLLGKglkksyelgpgkVIAGIVKRLdksaemeniga
MMMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILaqqvtspvqwETTVKTLlgkglkksyelgpgkvIAGIvkrldksaemeniga
MMMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWEttvktllgkglkkSYELGPGKVIAGIVKRLDKSAEMENIGA
*****SLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDA***ADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKR************
****RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI**
MMMARSLLLFYVLSQGAQ***********PAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAA********KGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDK*********
****RSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI**
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query311 2.2.26 [Sep-21-2011]
Q8IVS2390 Malonyl-CoA-acyl carrier yes no 0.948 0.756 0.403 4e-58
Q8R3F5381 Malonyl-CoA-acyl carrier yes no 0.948 0.774 0.394 2e-57
Q8T3L6379 Probable malonyl-CoA-acyl yes no 0.913 0.749 0.395 3e-51
P71019317 Malonyl CoA-acyl carrier yes no 0.926 0.908 0.389 6e-51
P0AAI9309 Malonyl CoA-acyl carrier N/A no 0.906 0.912 0.349 2e-43
P0AAJ0309 Malonyl CoA-acyl carrier yes no 0.906 0.912 0.349 2e-43
Q8X8I7309 Malonyl CoA-acyl carrier N/A no 0.906 0.912 0.349 2e-43
Q6GHK5308 Malonyl CoA-acyl carrier yes no 0.945 0.954 0.334 4e-43
Q93QD4308 Malonyl CoA-acyl carrier yes no 0.945 0.954 0.334 5e-43
Q5HGK3308 Malonyl CoA-acyl carrier yes no 0.945 0.954 0.334 5e-43
>sp|Q8IVS2|FABD_HUMAN Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2 Back     alignment and function desciption
 Score =  225 bits (573), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 175/307 (57%), Gaps = 12/307 (3%)

Query: 6   SLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIIS 65
           S+LLF    QG+Q VGMG+   + P   ELY  A  +LG+DLLE+  +GP+E LD T+  
Sbjct: 63  SVLLF--PGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 120

Query: 66  QPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 125
           QPAI+V SLAAVE L        +I++     G S+GE+ AL FAGA  F +GL  VK+R
Sbjct: 121 QPAIFVASLAAVEKLHHLQ--PSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIR 178

Query: 126 GAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNKVQIANYLCPGNYAV 181
             AMQEA++A    M+S++G    K    C  A +       E+   +++NYL P    +
Sbjct: 179 AEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVI 238

Query: 182 SGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVI 241
           SG  + +  ++  +  F  R T  L V+GAFHT  MEPAV  L  AL A  I  P + V 
Sbjct: 239 SGHQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVY 298

Query: 242 SNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLL----GKGLKKSYELGPGKVIAGIV 297
           SNV A  +  P  I K+LAQQ+ SPV+WE T+  +     G+G  +++E+GPG+ +  I+
Sbjct: 299 SNVHAHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAIL 358

Query: 298 KRLDKSA 304
           K  +  A
Sbjct: 359 KSCNMQA 365
Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the mitochondrial ACP protein (NDUFAB1). This suggests the existence of the biosynthesis of fatty acids in mitochondrias.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q8R3F5|FABD_MOUSE Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=2 SV=3 Back     alignment and function description
>sp|Q8T3L6|FABD_DROME Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster GN=beg PE=2 SV=2 Back     alignment and function description
>sp|P71019|FABD_BACSU Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis (strain 168) GN=fabD PE=3 SV=2 Back     alignment and function description
>sp|P0AAI9|FABD_ECOLI Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli (strain K12) GN=fabD PE=1 SV=2 Back     alignment and function description
>sp|P0AAJ0|FABD_ECOL6 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabD PE=3 SV=2 Back     alignment and function description
>sp|Q8X8I7|FABD_ECO57 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O157:H7 GN=fabD PE=3 SV=3 Back     alignment and function description
>sp|Q6GHK5|FABD_STAAR Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain MRSA252) GN=fabD PE=3 SV=1 Back     alignment and function description
>sp|Q93QD4|FABD_STAAU Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus GN=fabD PE=3 SV=1 Back     alignment and function description
>sp|Q5HGK3|FABD_STAAC Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus aureus (strain COL) GN=fabD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
449455001365 PREDICTED: malonyl-CoA-acyl carrier prot 0.971 0.827 0.890 1e-156
224103857371 predicted protein [Populus trichocarpa] 0.971 0.814 0.890 1e-155
225434451392 PREDICTED: malonyl-CoA-acyl carrier prot 0.971 0.770 0.874 1e-154
193290714384 putative acyl-carrier-protein S-malonylt 0.971 0.786 0.874 1e-153
210110182385 malonyl-CoA:ACP transacylase 1-2 [Arachi 0.971 0.784 0.870 1e-152
210110272386 malonyl-CoA:ACP transacylase 1-3 [Arachi 0.971 0.782 0.870 1e-152
210110180385 malonyl-CoA:ACP transacylase 1-1 [Arachi 0.971 0.784 0.867 1e-152
351723705344 malonyltransferase [Glycine max] gi|8261 0.971 0.877 0.860 1e-151
357458045359 Malonyl CoA-acyl carrier protein transac 0.971 0.841 0.857 1e-150
380853856404 acyl-carrier-protein S-malonyltransferas 0.971 0.747 0.857 1e-150
>gi|449455001|ref|XP_004145242.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] gi|449471626|ref|XP_004153364.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] gi|449514565|ref|XP_004164413.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/302 (89%), Positives = 285/302 (94%)

Query: 10  FYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAI 69
           F    QGAQAVGMGKE+ SVPAAA+L+ +ANDILGFDLL++CTNGPKEKLDST+ISQPAI
Sbjct: 64  FLFPGQGAQAVGMGKESHSVPAAADLFNRANDILGFDLLDVCTNGPKEKLDSTVISQPAI 123

Query: 70  YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAM 129
           YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGL+LVKLRG AM
Sbjct: 124 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLRLVKLRGEAM 183

Query: 130 QEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIE 189
           Q AAD AK AMVSIIGLDS+KVQQLCDAANQEVDE NKVQIAN+LCPGNYAVSGG+KGIE
Sbjct: 184 QAAADGAKSAMVSIIGLDSEKVQQLCDAANQEVDEANKVQIANFLCPGNYAVSGGLKGIE 243

Query: 190 AVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPH 249
           AVEAKAKSFKARMTVRLAVAGAFHT FMEPAVSRLEAALAAT+I TPR+PVISNVDAQPH
Sbjct: 244 AVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVSRLEAALAATEIRTPRIPVISNVDAQPH 303

Query: 250 ADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI 309
           ADP  IKKILA+QVTSPVQWETTVKTLL KGLKKSYELGPGKVIAGIVKR+DKSAE+ENI
Sbjct: 304 ADPSTIKKILARQVTSPVQWETTVKTLLSKGLKKSYELGPGKVIAGIVKRVDKSAEIENI 363

Query: 310 GA 311
            A
Sbjct: 364 AA 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224103857|ref|XP_002313221.1| predicted protein [Populus trichocarpa] gi|222849629|gb|EEE87176.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434451|ref|XP_002273446.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Vitis vinifera] Back     alignment and taxonomy information
>gi|193290714|gb|ACF17665.1| putative acyl-carrier-protein S-malonyltransferase/ transferase [Capsicum annuum] Back     alignment and taxonomy information
>gi|210110182|gb|ACJ07138.1| malonyl-CoA:ACP transacylase 1-2 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|210110272|gb|ACJ07139.1| malonyl-CoA:ACP transacylase 1-3 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|210110180|gb|ACJ07137.1| malonyl-CoA:ACP transacylase 1-1 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|351723705|ref|NP_001238312.1| malonyltransferase [Glycine max] gi|82618886|gb|ABB85235.1| malonyltransferase [Glycine max] Back     alignment and taxonomy information
>gi|357458045|ref|XP_003599303.1| Malonyl CoA-acyl carrier protein transacylase [Medicago truncatula] gi|355488351|gb|AES69554.1| Malonyl CoA-acyl carrier protein transacylase [Medicago truncatula] Back     alignment and taxonomy information
>gi|380853856|gb|AFE88235.1| acyl-carrier-protein S-malonyltransferase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
TAIR|locus:2060884393 EMB3147 "EMBRYO DEFECTIVE 3147 0.971 0.768 0.837 1.1e-128
MGI|MGI:2388651381 Mcat "malonyl CoA:ACP acyltran 0.948 0.774 0.390 1.7e-50
UNIPROTKB|Q8IVS2390 MCAT "Malonyl-CoA-acyl carrier 0.948 0.756 0.397 9.5e-50
RGD|1306698380 Mcat "malonyl CoA:ACP acyltran 0.948 0.776 0.384 6.7e-49
UNIPROTKB|E1BPG0387 MCAT "Uncharacterized protein" 0.948 0.762 0.384 8.5e-49
TIGR_CMR|GSU_1602307 GSU_1602 "malonyl CoA-acyl car 0.926 0.938 0.381 1.1e-48
UNIPROTKB|F1PUF5384 MCAT "Uncharacterized protein" 0.948 0.768 0.377 3.7e-48
UNIPROTKB|F1SJS0384 LOC100523602 "Uncharacterized 0.948 0.768 0.371 3e-46
FB|FBgn0036691379 beg "bad egg" [Drosophila mela 0.945 0.775 0.383 2.1e-45
TIGR_CMR|DET_1276310 DET_1276 "malonyl CoA-acyl car 0.932 0.935 0.362 4.5e-43
TAIR|locus:2060884 EMB3147 "EMBRYO DEFECTIVE 3147" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1263 (449.7 bits), Expect = 1.1e-128, P = 1.1e-128
 Identities = 253/302 (83%), Positives = 269/302 (89%)

Query:    10 FYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAI 69
             F    QGAQAVGMGKE+QSV AA ELYKKANDILG+DLL+IC NGPKEKLDST+ISQPAI
Sbjct:    92 FLFPGQGAQAVGMGKESQSVGAAGELYKKANDILGYDLLDICVNGPKEKLDSTVISQPAI 151

Query:    70 YVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAM 129
             YVTSLAAVELLR R+GG+QII+SVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG AM
Sbjct:   152 YVTSLAAVELLRVREGGEQIINSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGEAM 211

Query:   130 QEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIE 189
             Q AADAAK AMVSIIGLDS+KVQQLCDAANQEVDE +KVQIANYLCPGNYAVSGG+KGIE
Sbjct:   212 QAAADAAKSAMVSIIGLDSEKVQQLCDAANQEVDEADKVQIANYLCPGNYAVSGGLKGIE 271

Query:   190 AVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPH 249
              VEAKAKSFKARMTVRLAVAGAFHT FMEPAVSRLEAALAAT+I +PR+PVISNVDAQPH
Sbjct:   272 VVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVSRLEAALAATEIRSPRIPVISNVDAQPH 331

Query:   250 ADPEVIKKILAQQVTSPVQWEXXXXXXXXXXXXXSYELGPGKVIAGIVKRLDKSAEMENI 309
             ADP+ IKKILA+QVTSPVQWE             SYELGPGKVIAGI KR+DKSA  ENI
Sbjct:   332 ADPDTIKKILARQVTSPVQWETTVKTLLSKGLKSSYELGPGKVIAGIFKRVDKSASFENI 391

Query:   310 GA 311
              A
Sbjct:   392 SA 393
GO:0003824 "catalytic activity" evidence=IEA
GO:0004314 "[acyl-carrier-protein
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016740 "transferase activity" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0006744 "ubiquinone biosynthetic process" evidence=RCA
MGI|MGI:2388651 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IVS2 MCAT "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1306698 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPG0 MCAT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1602 GSU_1602 "malonyl CoA-acyl carrier protein transacylase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|F1PUF5 MCAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJS0 LOC100523602 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0036691 beg "bad egg" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1276 DET_1276 "malonyl CoA-acyl carrier protein transacylase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P71019FABD_BACSU2, ., 3, ., 1, ., 3, 90.38920.92600.9085yesno
Q93QD4FABD_STAAU2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
Q6GHK5FABD_STAAR2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
Q5HGK3FABD_STAAC2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
P0AAJ0FABD_ECOL62, ., 3, ., 1, ., 3, 90.34930.90670.9126yesno
Q6G9Y3FABD_STAAS2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
O85140FABD_SALTY2, ., 3, ., 1, ., 3, 90.34580.90670.9126yesno
Q7A124FABD_STAAW2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
P63458FABD_MYCTU2, ., 3, ., 1, ., 3, 90.30270.84560.8708yesno
Q7A5Z3FABD_STAAN2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
Q99UN8FABD_STAAM2, ., 3, ., 1, ., 3, 90.33440.94530.9545yesno
P43712FABD_HAEIN2, ., 3, ., 1, ., 3, 90.36930.89380.8910yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.766
3rd Layer2.3.1.390.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
PLN02752343 PLN02752, PLN02752, [acyl-carrier protein] S-malon 0.0
COG0331310 COG0331, FabD, (acyl-carrier-protein) S-malonyltra 3e-99
TIGR00128290 TIGR00128, fabD, malonyl CoA-acyl carrier protein 3e-85
TIGR03131295 TIGR03131, malonate_mdcH, malonate decarboxylase, 4e-49
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 5e-44
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 1e-31
pfam00698319 pfam00698, Acyl_transf_1, Acyl transferase domain 2e-25
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 1e-22
>gnl|CDD|215401 PLN02752, PLN02752, [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information 
 Score =  536 bits (1383), Expect = 0.0
 Identities = 240/297 (80%), Positives = 263/297 (88%)

Query: 15  QGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSL 74
           QGAQAVGMGKEA  VPAA  L+ KA++ILG+DLL++C NGPKEKLDST++SQPAIYV SL
Sbjct: 47  QGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASL 106

Query: 75  AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD 134
           AAVE LRARDGGQ +IDSVDV  GLSLGEYTAL FAGA SFEDGLKLVKLRG AMQ AAD
Sbjct: 107 AAVEKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAAD 166

Query: 135 AAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAK 194
           A    MVS+IGLDSDKVQ+LC AAN+EV ED+ VQIANYLCPGNYAVSGG KGI+AVEAK
Sbjct: 167 AGPSGMVSVIGLDSDKVQELCAAANEEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAK 226

Query: 195 AKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEV 254
           AKSFKARMTVRLAVAGAFHT FMEPAV  LEAALAA +I TPR+PVISNVDAQPH+DP  
Sbjct: 227 AKSFKARMTVRLAVAGAFHTSFMEPAVDALEAALAAVEIRTPRIPVISNVDAQPHSDPAT 286

Query: 255 IKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIGA 311
           IKKILA+QVTSPVQWETTVKTLL KGL+KSYELGPGKVIAGIVKR+DK A++EN+  
Sbjct: 287 IKKILARQVTSPVQWETTVKTLLEKGLEKSYELGPGKVIAGIVKRVDKGAKIENVTV 343

Length = 343
>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit Back     alignment and domain information
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 311
PLN02752343 [acyl-carrier protein] S-malonyltransferase 100.0
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 100.0
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 100.0
PF00698318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 100.0
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 100.0
KOG2926386 consensus Malonyl-CoA:ACP transacylase [Lipid tran 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
TIGR02816538 pfaB_fam PfaB family protein. The protein PfaB is 100.0
COG3321 1061 Polyketide synthase modules and related proteins [ 100.0
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 100.0
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 91.7
cd07223 405 Pat_PNPLA5-mammals Patatin-like phospholipase doma 90.7
cd07205175 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi 88.92
cd07207194 Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho 87.64
cd07210221 Pat_hypo_W_succinogenes_WS1459_like Hypothetical p 87.25
cd07219 382 Pat_PNPLA1 Patatin-like phospholipase domain conta 86.33
cd07209215 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim 85.87
cd07227269 Pat_Fungal_NTE1 Fungal patatin-like phospholipase 85.57
cd07224233 Pat_like Patatin-like phospholipase. Patatin-like 85.47
COG1752306 RssA Predicted esterase of the alpha-beta hydrolas 84.28
cd07225306 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai 84.14
cd07228175 Pat_NTE_like_bacteria Bacterial patatin-like phosp 84.12
cd07220249 Pat_PNPLA2 Patatin-like phospholipase domain conta 83.38
cd07204243 Pat_PNPLA_like Patatin-like phospholipase domain c 83.19
cd07229391 Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly 82.86
cd07218245 Pat_iPLA2 Calcium-independent phospholipase A2; Cl 82.25
cd07221252 Pat_PNPLA3 Patatin-like phospholipase domain conta 81.31
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-59  Score=420.63  Aligned_cols=308  Identities=78%  Similarity=1.137  Sum_probs=279.8

Q ss_pred             CCCCCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHH
Q 021568            2 MMARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLR   81 (311)
Q Consensus         2 ~~~~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~   81 (311)
                      ...+++++|+|||||+||.+|+++|.++|.|++.+++|++++|+++.+++.+.+++.++++.++|+.+|++|+|+++.|+
T Consensus        34 ~~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~l~  113 (343)
T PLN02752         34 ADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEKLR  113 (343)
T ss_pred             cCCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999998877666678889999999999999999999


Q ss_pred             HccCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccc
Q 021568           82 ARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQE  161 (311)
Q Consensus        82 ~~~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~  161 (311)
                      +++.+.+.+.+|++++|||+|||+|++++|+++++|+++++..|+++|+......++||+++.+++.+++++++++++++
T Consensus       114 ~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~~~  193 (343)
T PLN02752        114 ARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAANEE  193 (343)
T ss_pred             hcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhhhc
Confidence            98422222335788999999999999999999999999999999999988755678999999999999999999998865


Q ss_pred             cCCCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEE
Q 021568          162 VDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVI  241 (311)
Q Consensus       162 ~~~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~  241 (311)
                      ......++|+++|+|++++|+|+++.++++.+.++..+..+.++|+++.|||||+|+++.+.+.+.+.++.+++|++|++
T Consensus       194 ~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~~pfHsp~m~~~~~~l~~~l~~~~~~~p~ipvi  273 (343)
T PLN02752        194 VGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVDALEAALAAVEIRTPRIPVI  273 (343)
T ss_pred             cCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHHHHHHhcCCCCCCCceEE
Confidence            44456899999999999999999999999999888877667889999999999999999999999999999999999999


Q ss_pred             EccCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeec
Q 021568          242 SNVDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENI  309 (311)
Q Consensus       242 s~~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~  309 (311)
                      |+++|+++.+.+.++++|.+++++||+|..+++.+.+.+++.|||+||++.|+++++++.++.+..++
T Consensus       274 S~~tg~~~~~~~~~~~~l~~~l~~PV~~~~~i~~l~~~g~~~~iEiGP~~~L~~l~~~~~~~~~~~~~  341 (343)
T PLN02752        274 SNVDAQPHSDPATIKKILARQVTSPVQWETTVKTLLEKGLEKSYELGPGKVIAGIVKRVDKGAKIENV  341 (343)
T ss_pred             EcCCCCccCChHHHHHHHHHHCcCCEEHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHhhCCCceeec
Confidence            99999999888888999999999999999999999999999999999999999999999876655544

>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5 Back     alignment and domain information
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 Back     alignment and domain information
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes Back     alignment and domain information
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1 Back     alignment and domain information
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli Back     alignment and domain information
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07224 Pat_like Patatin-like phospholipase Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 Back     alignment and domain information
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2 Back     alignment and domain information
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family Back     alignment and domain information
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3 Back     alignment and domain information
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2 Back     alignment and domain information
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
2c2n_A339 Structure Of Human Mitochondrial Malonyltransferase 8e-55
3qat_A318 Crystal Structure Of Acyl-Carrier-Protein-S-Malonyl 1e-42
3ptw_A336 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 2e-42
2g1h_A308 Structure Of E.Coli Fabd Complexed With Glycerol Le 1e-41
1mla_A309 The Escherichia Coli Malonyl-Coa:acyl Carrier Prote 2e-41
3k89_A314 Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo088 2e-41
3ezo_A318 Crystal Structure Of Acyl-Carrier-Protein S- Malony 3e-41
3im9_A316 Crystal Structure Of Mcat From Staphylococcus Aureu 3e-40
3im8_A307 Crystal Structure Of Mcat From Streptococcus Pneumo 1e-38
3tqe_A316 Structure Of The Malonyl Coa-Acyl Carrier Protein T 1e-37
3h0p_A312 2.0 Angstrom Crystal Structure Of An Acyl Carrier P 2e-37
2cuy_A305 Crystal Structure Of Malonyl Coa-acyl Carrier Prote 5e-37
3hjv_A312 1.7 Angstrom Resolution Crystal Structure Of An Acy 1e-36
3rgi_A286 Trans-Acting Transferase From Disorazole Synthase L 3e-35
3sbm_A281 Trans-Acting Transferase From Disorazole Synthase I 5e-35
3g87_A 394 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 2e-33
2h1y_A321 Crystal Structure Of Malonyl-Coa:acyl Carrier Prote 6e-26
2cdh_4305 Architecture Of The Thermomyces Lanuginosus Fungal 1e-20
2cf2_B304 Architecture Of Mammalian Fatty Acid Synthase Lengt 1e-20
1nm2_A317 "malonyl-Coa:acp Transacylase" Length = 317 1e-20
2qc3_A303 Crystal Structure Of Mcat From Mycobacterium Tuberc 7e-18
2qj3_A322 Mycobacterium Tuberculosis Fabd Length = 322 8e-18
4amm_A401 Crystal Structure Of The Acyltransferase Domain Of 4e-14
4amn_A421 Crystal Structure Of The Acyltransferase Domain Of 6e-14
4amo_A421 Crystal Structure Of The Acyltransferase Domain Of 8e-14
3tzw_A491 Crystal Structure Of A Fragment Containing The Acyl 9e-09
3zen_D 3089 Cryo-em Structure Of The Mycobacterial Fatty Acid S 3e-07
2uva_G 2060 Crystal Structure Of Fatty Acid Synthase From Therm 5e-04
>pdb|2C2N|A Chain A, Structure Of Human Mitochondrial Malonyltransferase Length = 339 Back     alignment and structure 
Iteration: 1

 Score =  210 bits (534), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 167/307 (54%), Gaps = 12/307 (3%)
Query: 6   SLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIIS 65
           S+LLF    QG+Q VGMG+   + P   ELY  A  +LG+DLLE+  +GP+E LD T+  
Sbjct: 27  SVLLF--PGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHC 84
Query: 66  QPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLR 125
           QPAI+V SLAAVE L        +I++     G S+GE+ AL FAGA  F +GL  VK+R
Sbjct: 85  QPAIFVASLAAVEKLHHLQ--PSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIR 142
Query: 126 GAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNKVQIANYLCPGNYAV 181
             AMQEA++A    M+S++G    K    C  A +       E+   +++NYL P    +
Sbjct: 143 AEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVI 202
Query: 182 SGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVI 241
           SG  + +  ++  +  F  R T  L V+GAFHT  MEPAV  L  AL A  I  P + V 
Sbjct: 203 SGHQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVY 262
Query: 242 SNVDAQPHADPEVIKKILAQQVTSPVQWEXXXXXXXXXXX----XXSYELGPGKVIAGIV 297
           SNV    +  P  I K+LAQQ+ SPV+WE                 ++E+GPG+ +  I+
Sbjct: 263 SNVHGHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAIL 322
Query: 298 KRLDKSA 304
           K  +  A
Sbjct: 323 KSCNMQA 329
>pdb|3QAT|A Chain A, Crystal Structure Of Acyl-Carrier-Protein-S-Malonyltransferase From Bartonella Henselae Length = 318 Back     alignment and structure
>pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Clostridium Perfringens Atcc 13124 Length = 336 Back     alignment and structure
>pdb|2G1H|A Chain A, Structure Of E.Coli Fabd Complexed With Glycerol Length = 308 Back     alignment and structure
>pdb|1MLA|A Chain A, The Escherichia Coli Malonyl-Coa:acyl Carrier Protein Transacylase At 1.5-Angstroms Resolution. Crystal Structure Of A Fatty Acid Synthase Component Length = 309 Back     alignment and structure
>pdb|3K89|A Chain A, Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo0880(Fabd) Complexed With Glycerol Length = 314 Back     alignment and structure
>pdb|3EZO|A Chain A, Crystal Structure Of Acyl-Carrier-Protein S- Malonyltransferase From Burkholderia Pseudomallei 1710b Length = 318 Back     alignment and structure
>pdb|3IM9|A Chain A, Crystal Structure Of Mcat From Staphylococcus Aureus Length = 316 Back     alignment and structure
>pdb|3IM8|A Chain A, Crystal Structure Of Mcat From Streptococcus Pneumoniae Length = 307 Back     alignment and structure
>pdb|3TQE|A Chain A, Structure Of The Malonyl Coa-Acyl Carrier Protein Transacylase (Fabd) From Coxiella Burnetii Length = 316 Back     alignment and structure
>pdb|3H0P|A Chain A, 2.0 Angstrom Crystal Structure Of An Acyl Carrier Protein S- Malonyltransferase From Salmonella Typhimurium. Length = 312 Back     alignment and structure
>pdb|2CUY|A Chain A, Crystal Structure Of Malonyl Coa-acyl Carrier Protein Transacylase From Thermus Thermophilus Hb8 Length = 305 Back     alignment and structure
>pdb|3HJV|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of An Acyl Carrier Protein S-Malonyltransferase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 Length = 312 Back     alignment and structure
>pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 Back     alignment and structure
>pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 Back     alignment and structure
>pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Burkholderia Pseudomallei Using Dried Seaweed As Nucleant Or Protease Length = 394 Back     alignment and structure
>pdb|2H1Y|A Chain A, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein Transacylase (Mcat) From Helicobacter Pylori Length = 321 Back     alignment and structure
>pdb|2CDH|4 Chain 4, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. Length = 305 Back     alignment and structure
>pdb|2CF2|B Chain B, Architecture Of Mammalian Fatty Acid Synthase Length = 304 Back     alignment and structure
>pdb|1NM2|A Chain A, "malonyl-Coa:acp Transacylase" Length = 317 Back     alignment and structure
>pdb|2QC3|A Chain A, Crystal Structure Of Mcat From Mycobacterium Tuberculosis Length = 303 Back     alignment and structure
>pdb|2QJ3|A Chain A, Mycobacterium Tuberculosis Fabd Length = 322 Back     alignment and structure
>pdb|4AMM|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 401 Back     alignment and structure
>pdb|4AMN|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMO|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|3TZW|A Chain A, Crystal Structure Of A Fragment Containing The Acyltransferase Domain Of Pks13 From Mycobacterium Tuberculosis In The Orthorhombic Apoform At 2.6 A Length = 491 Back     alignment and structure
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 Back     alignment and structure
>pdb|2UVA|G Chain G, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Beta Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 2060 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 1e-133
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 1e-116
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 1e-114
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 1e-114
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 1e-114
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 1e-114
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 1e-114
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 1e-113
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 1e-112
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 1e-111
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 1e-111
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 1e-110
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 1e-108
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 1e-107
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 1e-107
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 7e-53
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 2e-51
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 2e-52
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 2e-51
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 3e-39
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 3e-34
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 5e-32
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 1e-28
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 2e-28
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 Back     alignment and structure
 Score =  380 bits (977), Expect = e-133
 Identities = 119/298 (39%), Positives = 169/298 (56%), Gaps = 10/298 (3%)

Query: 15  QGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSL 74
           QG+Q VGMG+   + P   ELY  A  +LG+DLLE+  +GP+E LD T+  QPAI+V SL
Sbjct: 34  QGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQPAIFVASL 93

Query: 75  AAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAAD 134
           AAVE L        +I++     G S+GE+ AL FAGA  F +GL  VK+R  AMQEA++
Sbjct: 94  AAVEKLHHLQP--SVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEAMQEASE 151

Query: 135 AAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNKVQIANYLCPGNYAVSGGVKGIEA 190
           A    M+S++G    K    C  A +       E+   +++NYL P    +SG  + +  
Sbjct: 152 AVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISGHQEALRF 211

Query: 191 VEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHA 250
           ++  +  F  R T  L V+GAFHT  MEPAV  L  AL A  I  P + V SNV    + 
Sbjct: 212 LQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYR 271

Query: 251 DPEVIKKILAQQVTSPVQWETTVKTLL----GKGLKKSYELGPGKVIAGIVKRLDKSA 304
            P  I K+LAQQ+ SPV+WE T+  +     G+G  +++E+GPG+ +  I+K  +  A
Sbjct: 272 HPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQA 329
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
3ezo_A318 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3k89_A314 Malonyl COA-ACP transacylase; bacterial blight, XO 100.0
3tqe_A316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 100.0
3ptw_A336 Malonyl COA-acyl carrier protein transacylase; str 100.0
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 100.0
3qat_A318 Malonyl COA-acyl carrier protein transacylase; sea 100.0
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 100.0
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 100.0
2cuy_A305 Malonyl COA-[acyl carrier protein] transacylase; t 100.0
2h1y_A321 Malonyl coenzyme A-acyl carrier protein transacyl; 100.0
1nm2_A317 Malonyl COA:acyl carrier protein malonyltransfera; 100.0
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 100.0
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 100.0
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 100.0
3g87_A394 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3tzy_A491 Polyketide synthase PKS13; acyltransferase, long f 100.0
4amm_A401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
2hg4_A917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A915 Eryaii erythromycin polyketide synthase modules 3; 100.0
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 100.0
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.45
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 94.92
3qit_A286 CURM TE, polyketide synthase; thioesterase, alpha/ 81.08
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
Probab=100.00  E-value=2e-65  Score=452.75  Aligned_cols=298  Identities=33%  Similarity=0.560  Sum_probs=278.2

Q ss_pred             CCCCEEEEECCCCcchhhhhHHhhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHc
Q 021568            4 ARSLLLFYVLSQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRAR   83 (311)
Q Consensus         4 ~~~~~~~~F~Gqg~~~~~~~~~l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~   83 (311)
                      ++++++|+|||||+||.+|+++|..+|.||+.+|+|++++|+++.+++.+.+...++++.++|+++|++|+|++++|+++
T Consensus         7 ~~~~~~f~F~GQGsQ~~gMg~~L~~~p~fr~~~~~~~~~lg~~l~~~~~~~~~~~l~~t~~~Qpai~a~~~al~~~l~~~   86 (318)
T 3ezo_A            7 HHMKFAFVFPGQGSQSVGMLNAFADVAVVRETLDEASDALGQDIGKLIADGPADELNLTTNTQPVMLTAAYACYRAWQQA   86 (318)
T ss_dssp             --CCEEEEECCTTCCCTTTTGGGTTCHHHHHHHHHHHHHHSSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeEEEECCcchhhhhHHHHHhhCHHHHHHHHHHHHHhCCCHHHHhhCCCHhHhccchhHHHHHHHHHHHHHHHHHHc
Confidence            46789999999999999999993399999999999999999999999988777788899999999999999999999987


Q ss_pred             cCCCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccC
Q 021568           84 DGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD  163 (311)
Q Consensus        84 ~~gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~  163 (311)
                      . |+    +|++++|||+||++|++++|++|++|++++++.||++|++.....+|+|++|.+.+.++++++++..+.   
T Consensus        87 ~-Gi----~P~~v~GHSlGE~aAa~~AG~ls~edal~lv~~Rg~lm~~~~~~~~G~M~aV~~~~~~~v~~~l~~~~~---  158 (318)
T 3ezo_A           87 G-GA----QPSIVAGHSLGEYTALVAAGAIAFRDALPLVRFRAQAMQTAVPVGVGGMAAILGLDDDTVRAVCAEASA---  158 (318)
T ss_dssp             T-CC----CCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTSSCTTSEEEEEEESCCHHHHHHHHHHHGG---
T ss_pred             c-CC----CCcEEEECCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhcCC---
Confidence            5 77    899999999999999999999999999999999999999876556789999999999999999988653   


Q ss_pred             CCCceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEc
Q 021568          164 EDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISN  243 (311)
Q Consensus       164 ~~~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~  243 (311)
                       ...++|+|+|+|+++||+|+.+.++++.+.+++.+..+.++|+++.|||||+|+++.++|.+.+.++.+++|++|++|+
T Consensus       159 -~~~v~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~~~~~l~~~~~~~p~ipv~S~  237 (318)
T 3ezo_A          159 -TGVVEAVNFNAPAQVVIAGTKAGIEKACEIAKEKGAKRALPLPVSAPFHSSLLKPASDKLREYLAGVDVKAPKISVVNN  237 (318)
T ss_dssp             -GSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSCSSCTTSGGGHHHHHHHHHHHTTSCCCCCSSEEBCT
T ss_pred             -CCeEEEEEEcCCCCEEEeCCHHHHHHHHHHHHhCCCceEEECCCCCCcChHHHHHHHHHHHHHHhcCCCCCCCCeEEEC
Confidence             3579999999999999999999999999999999875789999999999999999999999999999999999999999


Q ss_pred             cCCCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeecc
Q 021568          244 VDAQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIG  310 (311)
Q Consensus       244 ~~g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~~  310 (311)
                      ++|+++.+.+.+++||.+|+++||+|.++++.+.+.|+++|||+||+++|++++++++++.+..++.
T Consensus       238 vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~g~~~fvEiGP~~~L~~~~~~~~~~~~~~~~~  304 (318)
T 3ezo_A          238 IDVAVVSDPAAIKDALVRQAAGPVRWVECVQHIAREGVTHVIECGPGKVLAGLTKRIDGNLVGASVF  304 (318)
T ss_dssp             TTCCBCCCHHHHHHHHHHHTTSCBCHHHHHHHHHHTTCCEEEEESSSSHHHHHHHHHCTTSEEEEES
T ss_pred             CCCcccCChhHHHHHHHHHhcccEEHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHhCCCceEecC
Confidence            9999998888889999999999999999999999999999999999999999999999998887763
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 311
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 4e-21
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 8e-19
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 2e-20
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 2e-13
d1mlaa270 d.58.23.1 (A:128-197) Probable ACP-binding domain 8e-12
d1nm2a262 d.58.23.1 (A:134-195) Probable ACP-binding domain 2e-07
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

 Score = 88.0 bits (217), Expect = 4e-21
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 2/161 (1%)

Query: 151 VQQLCDAANQEVDEDNKVQIANYLCPGNYA-VSGGVKGIEAVEAKAKSFKARMTVRLAVA 209
                    Q+        +A +      A V  GV          +     M   +   
Sbjct: 67  ASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEV 126

Query: 210 GAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVDAQPHADPEVIKKILAQQVTSPVQW 269
              H   M+PA  +L   LA    N P +PV++NVD +   + + I+  L +Q+ +PVQW
Sbjct: 127 -PSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQW 185

Query: 270 ETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIG 310
             +V+ +  +G++  YE+GPGKV+ G+ KR+  +     + 
Sbjct: 186 TKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALN 226
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Length = 70 Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 62 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 100.0
d1mlaa270 Probable ACP-binding domain of malonyl-CoA ACP tra 99.32
d1nm2a262 Probable ACP-binding domain of malonyl-CoA ACP tra 98.9
d1ispa_179 Lipase A {Bacillus subtilis [TaxId: 1423]} 82.11
d1ehya_293 Bacterial epoxide hydrolase {Agrobacterium radioba 81.33
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-50  Score=341.71  Aligned_cols=225  Identities=36%  Similarity=0.636  Sum_probs=210.0

Q ss_pred             CEEEEECCCCcchhhhhHH-hhccHHHHHHHHHHHHhhCCCHHHHhccCCccccccCcchhhHHHHHHHHHHHHHHHccC
Q 021568            7 LLLFYVLSQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDG   85 (311)
Q Consensus         7 ~~~~~F~Gqg~~~~~~~~~-l~~~p~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~~q~al~~~l~~~~~   85 (311)
                      +++|+|||||+||.+|+++ |..+|.||+.+|+|++++|+++.+.+...++...+++...|++++++|+|++++|+++. 
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~~~-   79 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQG-   79 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHhCCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            4799999999999999999 68999999999999999999999988877777778888999999999999999999875 


Q ss_pred             CCCccCCceEEecccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEcCCCHHHHHHHHHHhccccCCC
Q 021568           86 GQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDED  165 (311)
Q Consensus        86 gi~~~~~p~~~~G~S~Ge~~A~~~ag~~s~~d~~~l~~~r~~~~~~~~~~~~~~m~~v~~~~~~~~~~~l~~~~~~~~~~  165 (311)
                      |+    +|++++|||+||++|++++|+++++|+++++..||++|+...   +                            
T Consensus        80 g~----~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~---~----------------------------  124 (235)
T d1mlaa1          80 GK----APAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAV---P----------------------------  124 (235)
T ss_dssp             CC----CCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHS---C----------------------------
T ss_pred             CC----CceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcC---C----------------------------
Confidence            77    899999999999999999999999999999999999987651   0                            


Q ss_pred             CceEEEeecCCCcEEEEcChhhHHHHHHHHHhcCCCeeEEcCCCCCCCccchHHHHHHHHHHHhcCCCCCCCccEEEccC
Q 021568          166 NKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEAALAATQINTPRMPVISNVD  245 (311)
Q Consensus       166 ~~~~ia~~ns~~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~~Hs~~~~~~~~~~~~~l~~~~~~~p~~pv~s~~~  245 (311)
                                                                 ..||||++|++..++|.+.+.++.++.|++|++|+++
T Consensus       125 -------------------------------------------~~pfHs~~m~~~~~~~~~~l~~v~~~~p~~pviS~~t  161 (235)
T d1mlaa1         125 -------------------------------------------EVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVD  161 (235)
T ss_dssp             -------------------------------------------TSCTTSGGGHHHHHHHHHHHHTSCCCCCSSCBBCTTT
T ss_pred             -------------------------------------------CCcchhHHhhhhHHHHHHHHhcCCCCCCcceEEeCCC
Confidence                                                       2489999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhhcCccchHHHHHHHHHCCCCEEEEECCChhHHHHHHHhcCCCceeecc
Q 021568          246 AQPHADPEVIKKILAQQVTSPVQWETTVKTLLGKGLKKSYELGPGKVIAGIVKRLDKSAEMENIG  310 (311)
Q Consensus       246 g~~~~~~~~~~~~~~~~l~~pv~~~~~i~~~~~~~~~~~ve~Gp~~~l~~~~~~~~~~~~~~~~~  310 (311)
                      |++..+.+.+++||.+|+++||+|.++++.+.+.|+++|||+||+.+|++++++++++.+..++.
T Consensus       162 g~~~~~~~~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~~~~~~v~  226 (235)
T d1mlaa1         162 VKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALN  226 (235)
T ss_dssp             CCBCCSHHHHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCCCHHHHHHHHHHhccCCccHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCCCCceecC
Confidence            99999999899999999999999999999999999999999999999999999999988877653
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Back     information, alignment and structure