Citrus Sinensis ID: 021596
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 310 | 2.2.26 [Sep-21-2011] | |||||||
| P52578 | 308 | Isoflavone reductase homo | N/A | no | 0.993 | 1.0 | 0.751 | 1e-131 | |
| E1U332 | 308 | Isoflavone reductase-like | N/A | no | 0.993 | 1.0 | 0.706 | 1e-124 | |
| P52577 | 310 | Isoflavone reductase homo | no | no | 0.987 | 0.987 | 0.679 | 1e-115 | |
| P52579 | 310 | Isoflavone reductase homo | N/A | no | 0.993 | 0.993 | 0.645 | 1e-112 | |
| P52580 | 309 | Isoflavone reductase homo | N/A | no | 0.993 | 0.996 | 0.581 | 7e-98 | |
| P52575 | 318 | Isoflavone reductase OS=M | N/A | no | 0.990 | 0.965 | 0.551 | 7e-95 | |
| P52576 | 318 | Isoflavone reductase OS=P | N/A | no | 0.990 | 0.965 | 0.551 | 2e-94 | |
| Q00016 | 318 | Isoflavone reductase OS=C | N/A | no | 0.990 | 0.965 | 0.557 | 2e-93 | |
| P52581 | 312 | Isoflavone reductase homo | N/A | no | 0.980 | 0.974 | 0.466 | 1e-73 | |
| Q15GI3 | 323 | Isoeugenol synthase 1 OS= | N/A | no | 0.961 | 0.922 | 0.463 | 2e-71 |
| >sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/310 (75%), Positives = 264/310 (85%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA KSKIL IGGTGYIGKFIVEAS KAGH TFVLVRESTLS P+K++L+D FK+ GV FV
Sbjct: 1 MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFV 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HESLV AIKQVDVVISTVGHALLADQVK+IAAIKEAGNV RFFPSEFGNDVDR
Sbjct: 61 HGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRV 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAK+ + + KA+IRR VEAEGIP+TYV ++ F GY LPNL QPGAA PP DKVVI
Sbjct: 121 H-AVEPAKAAF-NTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKVVI 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LG GN KAV+NKE+DI TYTI AVDDP+TLNK LYI+PP NI + N+LVSLWE+K GK L
Sbjct: 179 LGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGKNL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
ER YV EEQ+LKNIQEA+ P NV LSIYH+ F+ G TNFEIEPSFGVEAS+++PDVKYT
Sbjct: 239 ERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYT 298
Query: 301 TVDEYLNQFV 310
+DE LNQ+V
Sbjct: 299 PIDEILNQYV 308
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Solanum tuberosum (taxid: 4113) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/310 (70%), Positives = 259/310 (83%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA K+KIL IGGTGYIGKFIVEAS K+ HPTF L REST+S P K +++ FKN GV +
Sbjct: 1 MADKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTIL 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HESLV AIKQVDVVISTVG LADQVKIIAAIKEAGNV RFFPS+FG DVDR
Sbjct: 61 TGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRC 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAKS +++K++IRRA+EAEGIPYT+V + F GY LP L+QP APPRDKV+I
Sbjct: 121 H-AVEPAKS-SFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVII 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGN KAV+N+E+DI TYTIKAVDD RTLNK LYI+PP NIYSFN+LV+LWE+KIGKTL
Sbjct: 179 LGDGNAKAVFNEENDIGTYTIKAVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGKTL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YV EEQ+LK IQE+ P N++++I HS F+ G TNF+IEPSFGVEAS+L+PDVKYT
Sbjct: 239 EKIYVPEEQVLKQIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVKYT 298
Query: 301 TVDEYLNQFV 310
TV+EYL+QFV
Sbjct: 299 TVEEYLDQFV 308
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Olea europaea (taxid: 4146) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 249/312 (79%), Gaps = 6/312 (1%)
Query: 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
MA+ KSKIL IGGTGYIGKF+VEAS KAGH TF LVRE+TLS P K + + FK+LGV
Sbjct: 1 MATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTI 60
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ GD+ +HESLV AIKQVDVVISTVG + DQ KII+AIKEAGNV RF PSEFG DVDR
Sbjct: 61 LHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ--PGAAAPPRDK 177
AVEPAKS + K +IRR +EAEGIPYTY + CF GY+LP L+Q PG +PPRDK
Sbjct: 121 T-SAVEPAKSAFAG-KIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDK 178
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V ILGDGN KAV NKE+DIA YTIKAVDDPRTLNK LYI+P N S N++V+LWE+KIG
Sbjct: 179 VTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIG 238
Query: 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297
K+LE+ ++ EEQLLK+IQE+ P NV+LSI H+VF+NG TN IEPSFGVEAS+L+PDV
Sbjct: 239 KSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDV 297
Query: 298 KYTTVDEYLNQF 309
KYT+VDEYL+ F
Sbjct: 298 KYTSVDEYLSYF 309
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/310 (64%), Positives = 241/310 (77%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
++ KSKIL IGGTGYIGK++VE S K+GHPTF L+RESTL P KS+L+D FK+ GV +
Sbjct: 3 VSEKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLL 62
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ N ESL+ AIKQVDVVISTVG DQV II AIKEAGN+ RF PSEFG DVD A
Sbjct: 63 FGDISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHA 122
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
A+EPA S++ +K RIRR +EAEGIPYTYV F +FLPNL Q A PPRDKVVI
Sbjct: 123 R-AIEPAASLFA-LKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVI 180
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
GDGNPKA+Y KE+DIATYTI+AVDDPRTLNK L+++PP NI SFN++VSLWE KIGKTL
Sbjct: 181 FGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTL 240
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ Y+SEE +L+ +QE P L+I HSVF+NG NFE++P GVEA++L+P VKYT
Sbjct: 241 EKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYT 300
Query: 301 TVDEYLNQFV 310
TVDE+ N+FV
Sbjct: 301 TVDEFYNKFV 310
|
Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 357 bits (916), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 181/311 (58%), Positives = 228/311 (73%), Gaps = 3/311 (0%)
Query: 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
MAS KSKIL +GGTGY+G+ +V AS + GHPT LVR++ S P+K+ LL F++ GV
Sbjct: 1 MASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTL 60
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ GD+ + SLV+A+K DVVIS +G +ADQ +++ AIKEAGNV RFFPSEFG DVDR
Sbjct: 61 LKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDR 120
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV 179
G VEPAKS+ K IRRA EA GIPYTY + F G+ LP + Q A PP DK V
Sbjct: 121 T-GIVEPAKSIL-GAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAV 178
Query: 180 ILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239
+LGDG+ KAV+ +E DIATYT+ A DDPR NK LYI+PP N S N+L+SLWE+K GKT
Sbjct: 179 VLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKT 238
Query: 240 LEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKY 299
REYV EE +LK IQE+ P N+IL+I H+ F+ G QT FEI+P+ GV+AS+L+PDVKY
Sbjct: 239 FRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKY 298
Query: 300 TTVDEYLNQFV 310
TTVDEYLN+F+
Sbjct: 299 TTVDEYLNRFL 309
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 347 bits (890), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 237/321 (73%), Gaps = 14/321 (4%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES----------TLSAP-SKSQLL 49
MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR++ T + P +K +L+
Sbjct: 1 MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELI 60
Query: 50 DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109
D++++LGV + GD+ +HE+LV AIKQVD+VI G L+ DQVKII AIKEAGNV +FF
Sbjct: 61 DNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 120
Query: 110 PSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPG 169
PSEFG DVDR H AVEP + V+ + KA IRR +EAEG+PYTY+ + F GYFL NL Q
Sbjct: 121 PSEFGLDVDR-HEAVEPVRQVFEE-KASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLD 178
Query: 170 AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLV 229
PPRDKVVILGDGN K Y E D+ T+TI+A +DP TLNK ++I+ P N + N+++
Sbjct: 179 TTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEVI 238
Query: 230 SLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVE 289
+LWE+KIGKTLE+ YVSEEQ+LK+IQE++ P N +L++YHS + G +EI+P+ +E
Sbjct: 239 ALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIE 297
Query: 290 ASQLFPDVKYTTVDEYLNQFV 310
AS+ +PDV YTT DEYLNQFV
Sbjct: 298 ASEAYPDVTYTTADEYLNQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa. Medicago sativa (taxid: 3879) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (885), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/321 (55%), Positives = 234/321 (72%), Gaps = 14/321 (4%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST--LSAP---------SKSQLL 49
MA+++KIL +G TG IG+ IV AS+KAG+PT+ LVR+++ ++ P +K +LL
Sbjct: 1 MATENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELL 60
Query: 50 DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109
+++ GV + GD+ +HE+LVNAIKQVD VI G L+ DQVK+I AIKEAGNV RFF
Sbjct: 61 KNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFF 120
Query: 110 PSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPG 169
PSEFG DVDR H AVEP + V+ + KA IRR VE+EG+PYTY+ + F GYFL NL Q
Sbjct: 121 PSEFGLDVDR-HDAVEPVRQVFEE-KASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQID 178
Query: 170 AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLV 229
A PPRDKVVILGDGN + Y E D+ TYTI+A +DP TLNK ++I+ P N + N+++
Sbjct: 179 ATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEVI 238
Query: 230 SLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVE 289
+LWE+KIGKTLE+ YVSEEQ+LK+IQ ++ P N +L++YHS + G +EI+P+ VE
Sbjct: 239 ALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVE 297
Query: 290 ASQLFPDVKYTTVDEYLNQFV 310
A +PDVKYTT DEYLNQFV
Sbjct: 298 AYDAYPDVKYTTADEYLNQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/321 (55%), Positives = 231/321 (71%), Gaps = 14/321 (4%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES--TLSAPS---------KSQLL 49
MAS+++IL +G TG IG+ +V AS+KAG+PT+ L+R++ ++ PS K +LL
Sbjct: 1 MASQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELL 60
Query: 50 DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109
FK GV + GD+ +HE+LV AIKQVD VI T G L+ DQVKII AIKEAGNV RFF
Sbjct: 61 QSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFF 120
Query: 110 PSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPG 169
PSEFG DVDR H AV+P + V+ D KA IRR VEAEG+PYTY+ + F GYFL NL Q
Sbjct: 121 PSEFGLDVDR-HDAVDPVRPVF-DEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFD 178
Query: 170 AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLV 229
A PPRDKV+ILGDGN K Y E D+ TYTI+A +DPRTLNK ++I+ P N + N++V
Sbjct: 179 ATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEVV 238
Query: 230 SLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVE 289
SLWE+KIGKTLE+ Y+SEE++LK+I + P N +L++YHS + G +EI+P+ E
Sbjct: 239 SLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAE 297
Query: 290 ASQLFPDVKYTTVDEYLNQFV 310
A L+PDVKYTT DEYL+QFV
Sbjct: 298 AYDLYPDVKYTTADEYLDQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. Cicer arietinum (taxid: 3827) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1 | Back alignment and function description |
|---|
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 200/313 (63%), Gaps = 9/313 (2%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
KSK+L +GGTGY+G+ IV+AS++ GH TF+L R K Q+L FK G V
Sbjct: 3 KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVEAS 62
Query: 64 VLNHESLVNAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVTRFFPSEFGNDV 117
+H+SLV+A+K VDVVI T+ H LL Q+K++ AIK+AGN+ RF PSEFG D
Sbjct: 63 FSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLT-QLKLVEAIKDAGNIKRFLPSEFGMDP 121
Query: 118 DRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK 177
A+EP + V +D K +R+A+E IP+TY+ + CF GYF NL Q PPRDK
Sbjct: 122 ALMGHALEPGR-VTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDK 180
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V++ GDGN K VY EDD+ATYTIK +DDPRTLNK +Y++PP NI + +L+ WE IG
Sbjct: 181 VLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIG 240
Query: 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297
K LE+ +SE+ L ++ V + ++ +F G TNFEI + G EAS+L+P+V
Sbjct: 241 KQLEKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEIGEN-GEEASELYPEV 299
Query: 298 KYTTVDEYLNQFV 310
YT +D+YL +V
Sbjct: 300 NYTRMDQYLKVYV 312
|
Lupinus albus (taxid: 3870) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/304 (46%), Positives = 195/304 (64%), Gaps = 6/304 (1%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-STLSAPSKSQLLDHFKNLGVNFVVG 62
K KIL +G TGY+GK++V+AS+ GHPT+ V S SK QLL F++LGV G
Sbjct: 5 KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYG 64
Query: 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG 122
++ H+ LV K+VD+VIST+ +Q+K+I AIKEAGN+ RF PSEFGN+VDR
Sbjct: 65 ELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVRA 124
Query: 123 AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182
P D K +IRRA EA GIP+T+V + YF+ LL P + ++V I G
Sbjct: 125 L--PRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKS---EQVTIYG 179
Query: 183 DGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242
G+ KAV N E+D+A YTIKA DDPR N+ L I+PP NI S DLVS WE+ G TL+
Sbjct: 180 SGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKM 239
Query: 243 EYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTV 302
++SE++++K + P+N+ SI H++F+ G Q +FE+ +EAS+L+P+ YT+V
Sbjct: 240 THISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSV 299
Query: 303 DEYL 306
DEYL
Sbjct: 300 DEYL 303
|
Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices. Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 310 | ||||||
| 3243234 | 308 | isoflavone reductase related protein [Py | 0.993 | 1.0 | 0.790 | 1e-136 | |
| 118486357 | 306 | unknown [Populus trichocarpa] | 0.980 | 0.993 | 0.800 | 1e-135 | |
| 224105373 | 306 | phenylcoumaran benzylic ether reductase | 0.980 | 0.993 | 0.797 | 1e-134 | |
| 76559894 | 306 | TPA: isoflavone reductase-like protein 5 | 0.987 | 1.0 | 0.770 | 1e-132 | |
| 76559896 | 308 | TPA: isoflavone reductase-like protein 6 | 0.993 | 1.0 | 0.754 | 1e-131 | |
| 225428436 | 306 | PREDICTED: isoflavone reductase homolog | 0.987 | 1.0 | 0.764 | 1e-131 | |
| 357467313 | 312 | Isoflavone reductase-like protein [Medic | 0.980 | 0.974 | 0.758 | 1e-131 | |
| 449438299 | 308 | PREDICTED: isoflavone reductase homolog | 0.993 | 1.0 | 0.758 | 1e-131 | |
| 351726399 | 310 | isoflavone reductase homolog 2 [Glycine | 0.987 | 0.987 | 0.762 | 1e-130 | |
| 255640090 | 310 | unknown [Glycine max] | 0.987 | 0.987 | 0.762 | 1e-130 |
| >gi|3243234|gb|AAC24001.1| isoflavone reductase related protein [Pyrus communis] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/310 (79%), Positives = 275/310 (88%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MASKS+IL IGGTGYIGKFIVEAS KAG+PT+VLVRE++LS P+KS+++++FK LGVNFV
Sbjct: 1 MASKSQILFIGGTGYIGKFIVEASAKAGYPTYVLVREASLSDPAKSKVIENFKALGVNFV 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
+GD+ +HESLV AIKQVDVVISTVGH LADQ KIIAAIKEAGNV RFFPSEFGNDVDR+
Sbjct: 61 LGDLYDHESLVKAIKQVDVVISTVGHGQLADQGKIIAAIKEAGNVKRFFPSEFGNDVDRS 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAKS + + KA+IRRAVEAEGIPYTYV S F GYFLP L QPGA++ PRDKVVI
Sbjct: 121 H-AVEPAKSAF-ETKAKIRRAVEAEGIPYTYVSSNFFAGYFLPTLNQPGASSAPRDKVVI 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPKA++NKEDDI TYTI+AVDDPRTLNK LYI+PP N SFN+LVSLWE+KIGKTL
Sbjct: 179 LGDGNPKAIFNKEDDIGTYTIRAVDDPRTLNKVLYIRPPANTISFNELVSLWEKKIGKTL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
ER YV EEQLLKNIQEAA P NVILSI H+VF+ G TNFEIEPSFGVEA+ L+PDVKYT
Sbjct: 239 ERIYVPEEQLLKNIQEAAVPLNVILSISHAVFVKGDHTNFEIEPSFGVEATALYPDVKYT 298
Query: 301 TVDEYLNQFV 310
TVDEYLNQFV
Sbjct: 299 TVDEYLNQFV 308
|
Source: Pyrus communis Species: Pyrus communis Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486357|gb|ABK95019.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/306 (80%), Positives = 268/306 (87%), Gaps = 2/306 (0%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
SKIL IGGTGYIGKFIVEAS KAGHPTFVLVRESTLS P+KS ++D+FKNLGVNF++GD+
Sbjct: 3 SKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSNPAKSVVIDNFKNLGVNFLIGDL 62
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAV 124
+HESLV AIKQVDVVISTVGHA L +Q +IIAAIKEAGNV RFFPSEFGNDVDR + AV
Sbjct: 63 FDHESLVKAIKQVDVVISTVGHAQLVEQDRIIAAIKEAGNVKRFFPSEFGNDVDRVN-AV 121
Query: 125 EPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDG 184
EPAKS + KA +RRA+EAEGIPYTYV S F GYFL + QPGA APPRDKVVILGDG
Sbjct: 122 EPAKSAFA-TKANVRRAIEAEGIPYTYVSSNFFSGYFLLSFNQPGATAPPRDKVVILGDG 180
Query: 185 NPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244
NPKAV+NKEDDIATYTIKAVDDPRTLNK LYI+PP N SFNDLVSLWE+KIGKTLER Y
Sbjct: 181 NPKAVFNKEDDIATYTIKAVDDPRTLNKILYIKPPANTISFNDLVSLWEKKIGKTLERIY 240
Query: 245 VSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDE 304
V EEQLLKNIQEA+ P NV+LSI HSVF+ G TNFEIEPSFGVEAS+L+PDVKYTTVDE
Sbjct: 241 VPEEQLLKNIQEASVPVNVVLSIGHSVFVKGDHTNFEIEPSFGVEASELYPDVKYTTVDE 300
Query: 305 YLNQFV 310
YL QFV
Sbjct: 301 YLKQFV 306
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224105373|ref|XP_002313788.1| phenylcoumaran benzylic ether reductase 3 [Populus trichocarpa] gi|222850196|gb|EEE87743.1| phenylcoumaran benzylic ether reductase 3 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/306 (79%), Positives = 267/306 (87%), Gaps = 2/306 (0%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
SKIL IGGTGYIGKFIVEAS KAGHPTFVLVRESTLS P+KS ++ +FKNLGVNF++GD+
Sbjct: 3 SKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSNPAKSVVIYNFKNLGVNFLIGDL 62
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAV 124
+HESLV AIKQVDVVISTVGHA L +Q +IIAAIKEAGNV RFFPSEFGNDVDR + AV
Sbjct: 63 FDHESLVKAIKQVDVVISTVGHAQLVEQDRIIAAIKEAGNVKRFFPSEFGNDVDRVN-AV 121
Query: 125 EPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDG 184
EPAKS + KA +RRA+EAEGIPYTYV S F GYFL + QPGA APPRDKVVILGDG
Sbjct: 122 EPAKSAF-ATKANVRRAIEAEGIPYTYVSSNFFSGYFLLSFNQPGATAPPRDKVVILGDG 180
Query: 185 NPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244
NPKAV+NKEDDIATYTIKAVDDPRTLNK LYI+PP N SFNDLVSLWE+KIGKTLER Y
Sbjct: 181 NPKAVFNKEDDIATYTIKAVDDPRTLNKILYIKPPANTISFNDLVSLWEKKIGKTLERIY 240
Query: 245 VSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDE 304
V EEQLLKNIQEA+ P NV+LSI HSVF+ G TNFEIEPSFGVEAS+L+PDVKYTTVDE
Sbjct: 241 VPEEQLLKNIQEASVPVNVVLSIGHSVFVKGDHTNFEIEPSFGVEASELYPDVKYTTVDE 300
Query: 305 YLNQFV 310
YL QFV
Sbjct: 301 YLKQFV 306
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|76559894|tpe|CAI56334.1| TPA: isoflavone reductase-like protein 5 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/310 (77%), Positives = 265/310 (85%), Gaps = 4/310 (1%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M+ KSKIL IGGTGYIGKFIV AS K+GHPTF LVREST+S K ++++ FK+ GV V
Sbjct: 1 MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESTVS--EKFEIIESFKSSGVTLV 58
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HESLV AIKQVDVVISTVGHA L DQVKIIAAIKEAGNV RFFPSEFGNDVDR
Sbjct: 59 YGDLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 118
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAK+ + KA+IRR +EAEGIPYTYV S F GYFLP+L QPGA PPRDKV+I
Sbjct: 119 H-AVEPAKTAF-ATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPRDKVII 176
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPKAV+NKEDDI TYTIKAVDDPRTLNK LYI+PP N YSFNDLVSLWE+KIGKTL
Sbjct: 177 LGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKILYIRPPQNTYSFNDLVSLWEKKIGKTL 236
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YV EEQ+LKNIQEA+ P NVILSI HSVF+ G TNFEIEPSFGVEA++L+PDVKYT
Sbjct: 237 EKIYVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIEPSFGVEATELYPDVKYT 296
Query: 301 TVDEYLNQFV 310
TVDEYLNQFV
Sbjct: 297 TVDEYLNQFV 306
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|76559896|tpe|CAI56335.1| TPA: isoflavone reductase-like protein 6 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/310 (75%), Positives = 266/310 (85%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M+ KSKIL IGGTGYIGKFIV AS + GHPTF L+REST+S PSKS +++ FK+ GV+ V
Sbjct: 1 MSDKSKILIIGGTGYIGKFIVAASARLGHPTFALIRESTVSNPSKSGIIESFKSSGVSLV 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HESLV AIKQVDVVISTVG A L+DQVKIIAAIKEAGNV RFFPSEFGNDVDR
Sbjct: 61 YGDLYDHESLVKAIKQVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AV PAK+ + ++KA+IRR +EAEGIPYTYV S F G+FLP L QPGA APPRDKV+I
Sbjct: 121 H-AVGPAKTAF-EIKAQIRRTIEAEGIPYTYVSSNFFAGFFLPTLSQPGATAPPRDKVII 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPKAV+NKEDDI TYTIKA DDPR LNK LYI+PP N YSFN++VSLWE+KIGKTL
Sbjct: 179 LGDGNPKAVFNKEDDIGTYTIKAADDPRALNKILYIRPPQNTYSFNEIVSLWEKKIGKTL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YV EEQ+LKNIQEA+ P NVILSI HSVF+ G TNFEIEPSFGVEAS+L+PDVKYT
Sbjct: 239 EKIYVPEEQVLKNIQEASFPLNVILSISHSVFIKGDHTNFEIEPSFGVEASELYPDVKYT 298
Query: 301 TVDEYLNQFV 310
TVDEYL+QFV
Sbjct: 299 TVDEYLDQFV 308
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428436|ref|XP_002283953.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744403|emb|CBI37665.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/310 (76%), Positives = 265/310 (85%), Gaps = 4/310 (1%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M+ KSKIL IGGTGYIGKFIV AS K+GHPTF LVREST+S K ++++ FK+ GV V
Sbjct: 1 MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESTVS--EKFEIIESFKSSGVTLV 58
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HESLV AIKQVDVVISTVGHA L DQVKIIAAIKEAGNV RFFPSEFGNDVDR
Sbjct: 59 YGDLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 118
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAK+ + KA+IRR +EAEGIPYTYV S F GYFLP+L QPGA PPRDKV+I
Sbjct: 119 H-AVEPAKTAF-ATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPRDKVII 176
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPKAV+NKEDDI TYTIKAV+DPRTLNK LYI+PP N YSFNDLVSLWE+KIGKTL
Sbjct: 177 LGDGNPKAVFNKEDDIGTYTIKAVNDPRTLNKILYIRPPQNTYSFNDLVSLWEKKIGKTL 236
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YV EEQ+LKNIQEA+ P NVILSI HSVF+ G TNFEI+PSFGVEA++L+PDVKYT
Sbjct: 237 EKIYVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIQPSFGVEATELYPDVKYT 296
Query: 301 TVDEYLNQFV 310
TVDEYLNQFV
Sbjct: 297 TVDEYLNQFV 306
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357467313|ref|XP_003603941.1| Isoflavone reductase-like protein [Medicago truncatula] gi|355492989|gb|AES74192.1| Isoflavone reductase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/306 (75%), Positives = 269/306 (87%), Gaps = 2/306 (0%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
SKIL IGGTGYIGKFIVEAS KAGHPTF+L+RESTLS P+KS +++ FK+L VNFV+GD+
Sbjct: 9 SKILLIGGTGYIGKFIVEASAKAGHPTFLLIRESTLSNPTKSSIINKFKDLSVNFVLGDL 68
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAV 124
+H+SLV AIKQVDVVISTV + L+DQ KII+AIKEAGNV RFFPSEFGNDVDR+H AV
Sbjct: 69 YDHQSLVKAIKQVDVVISTVARSHLSDQDKIISAIKEAGNVKRFFPSEFGNDVDRSH-AV 127
Query: 125 EPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDG 184
EPAKS Y VKARIRR++E+EGIPYTYV S F GYFLP+L Q GA+APPRDKVVILGDG
Sbjct: 128 EPAKSAYA-VKARIRRSIESEGIPYTYVSSNYFAGYFLPSLSQHGASAPPRDKVVILGDG 186
Query: 185 NPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244
NPKAV+NKE+DIATYTIK+VDDPRTLNK LYI+P GN SFNDLVSLWE+KIGKTLER Y
Sbjct: 187 NPKAVFNKEEDIATYTIKSVDDPRTLNKILYIRPQGNALSFNDLVSLWEKKIGKTLERIY 246
Query: 245 VSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDE 304
V +EQLLK IQE++PP N++LSI H V++ G TNFEI+P+FGVEA+ L+PDVKYTTVDE
Sbjct: 247 VPKEQLLKQIQESSPPLNMMLSIAHCVYIKGDHTNFEIDPTFGVEATTLYPDVKYTTVDE 306
Query: 305 YLNQFV 310
+LNQFV
Sbjct: 307 FLNQFV 312
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438299|ref|XP_004136926.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus] gi|449478781|ref|XP_004155417.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/310 (75%), Positives = 264/310 (85%), Gaps = 2/310 (0%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MASKSKIL +GGTGYIGKFIVEAS KAG+PT+ LVR+STLS P+KSQ++++FKNLGV V
Sbjct: 1 MASKSKILIVGGTGYIGKFIVEASAKAGNPTYALVRDSTLSDPAKSQIINNFKNLGVKLV 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ NH+SLV AIK+VDVVISTVG LADQ K+IAAIKEAGNV RF PSEFGNDVDR
Sbjct: 61 SGDLYNHDSLVKAIKEVDVVISTVGAGQLADQEKLIAAIKEAGNVKRFLPSEFGNDVDRG 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEPAKS + VK +IRRAVEA IPYTYV S F YFLP+L QPGA PPRDKVVI
Sbjct: 121 H-AVEPAKSAF-TVKVQIRRAVEAAKIPYTYVSSNFFASYFLPSLSQPGATTPPRDKVVI 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPK+++NKEDDI TYTIKAVDDPRTLNK LYI+P GN YSFNDLVSLWE+KIGK L
Sbjct: 179 LGDGNPKSIFNKEDDIGTYTIKAVDDPRTLNKILYIRPSGNTYSFNDLVSLWEKKIGKNL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
ER YV EEQ+LKNIQEA P N+I+SI HS F+ G TNF+IEPSFGVEA+QL+PDVKYT
Sbjct: 239 ERIYVPEEQVLKNIQEAPVPLNIIISISHSAFVKGDHTNFDIEPSFGVEATQLYPDVKYT 298
Query: 301 TVDEYLNQFV 310
TVDE+LNQFV
Sbjct: 299 TVDEFLNQFV 308
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351726399|ref|NP_001237637.1| isoflavone reductase homolog 2 [Glycine max] gi|6573171|gb|AAF17578.1|AF202184_1 isoflavone reductase homolog 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/308 (76%), Positives = 265/308 (86%), Gaps = 2/308 (0%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG 62
SKSKIL IGGTGYIGKFIVEAS KAGHPTF+LVRESTLS P+KS L+D+FK LGVN V+G
Sbjct: 5 SKSKILFIGGTGYIGKFIVEASAKAGHPTFLLVRESTLSNPAKSPLIDNFKGLGVNLVLG 64
Query: 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG 122
D+ +H+SLV+AIKQVDVVISTVGH LADQ KII+AIKEAGNV +F+PSEFGNDVDR H
Sbjct: 65 DLYDHQSLVSAIKQVDVVISTVGHLQLADQDKIISAIKEAGNVKKFYPSEFGNDVDRTH- 123
Query: 123 AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182
AVEPAKS + KA++RRA+EAEGIP+TYV S F GYFLPNL QPGA A PRD+V+ILG
Sbjct: 124 AVEPAKSAFA-TKAKVRRAIEAEGIPFTYVSSNFFAGYFLPNLSQPGATAAPRDRVIILG 182
Query: 183 DGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242
DGNPKAV+NKE+DI TYTI +VDDPRTLNK LYI+PP N SFN+LV+LWE KIGKTLER
Sbjct: 183 DGNPKAVFNKEEDIGTYTINSVDDPRTLNKILYIRPPANTLSFNELVTLWEGKIGKTLER 242
Query: 243 EYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTV 302
YV EEQLLK I+E+APP NVILSI HS ++ G TNFEIE SFGVEAS L+PDVKY TV
Sbjct: 243 IYVPEEQLLKQIEESAPPVNVILSINHSSYVKGDHTNFEIESSFGVEASALYPDVKYITV 302
Query: 303 DEYLNQFV 310
DEYLNQFV
Sbjct: 303 DEYLNQFV 310
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255640090|gb|ACU20336.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/308 (76%), Positives = 265/308 (86%), Gaps = 2/308 (0%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG 62
SKSKIL IGGTGYIGKFIVEAS KAGHPTF+LVRESTLS P+KS L+D+FK LGVN V+G
Sbjct: 5 SKSKILFIGGTGYIGKFIVEASAKAGHPTFLLVRESTLSNPAKSPLIDNFKGLGVNLVLG 64
Query: 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG 122
D+ +H+SLV+AIKQVDVVISTVGH LADQ KII+AIKEAGNV +F+PSEFGNDVDR H
Sbjct: 65 DLYDHQSLVSAIKQVDVVISTVGHLQLADQDKIISAIKEAGNVKKFYPSEFGNDVDRTH- 123
Query: 123 AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182
AVEPAKS + KA++RRA+EAEGIP+TYV S F GYFLPNL QPGA A PRD+V+ILG
Sbjct: 124 AVEPAKSAFA-TKAKVRRAIEAEGIPFTYVSSNFFAGYFLPNLSQPGATAAPRDRVIILG 182
Query: 183 DGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242
DGNPKAV+NKE+DI TYTI +VDDPRTLNK LYI+PP N SFN+LV+LWE KIGKTLER
Sbjct: 183 DGNPKAVFNKEEDIGTYTINSVDDPRTLNKILYIRPPANTLSFNELVTLWEGKIGKTLER 242
Query: 243 EYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTV 302
YV EEQLLK I+E+APP NVILSI HS ++ G TNFEIE SFGVEAS L+PDVKY TV
Sbjct: 243 IYVPEEQLLKRIEESAPPVNVILSINHSSYVKGDHTNFEIESSFGVEASALYPDVKYITV 302
Query: 303 DEYLNQFV 310
DEYLNQFV
Sbjct: 303 DEYLNQFV 310
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 310 | ||||||
| TAIR|locus:2136383 | 308 | AT4G39230 [Arabidopsis thalian | 0.993 | 1.0 | 0.732 | 4.2e-118 | |
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.987 | 0.987 | 0.679 | 1.7e-105 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.990 | 0.965 | 0.647 | 2.6e-102 | |
| TAIR|locus:2025167 | 322 | AT1G75300 [Arabidopsis thalian | 0.970 | 0.934 | 0.618 | 2.6e-95 | |
| TAIR|locus:2016482 | 310 | AT1G19540 [Arabidopsis thalian | 0.980 | 0.980 | 0.593 | 2.2e-89 | |
| TAIR|locus:2139494 | 306 | AT4G34540 [Arabidopsis thalian | 0.958 | 0.970 | 0.463 | 2.4e-69 | |
| TAIR|locus:2031730 | 317 | PRR1 "pinoresinol reductase 1" | 0.977 | 0.955 | 0.447 | 4.1e-65 | |
| TAIR|locus:2119455 | 317 | PRR2 "pinoresinol reductase 2" | 0.980 | 0.958 | 0.442 | 3.8e-62 | |
| ASPGD|ASPL0000047359 | 312 | AN8968 [Emericella nidulans (t | 0.783 | 0.778 | 0.263 | 4e-19 | |
| ASPGD|ASPL0000072559 | 359 | AN8815 [Emericella nidulans (t | 0.748 | 0.646 | 0.301 | 1.6e-15 |
| TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 227/310 (73%), Positives = 260/310 (83%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M SKSKIL IGGTGYIGK+IVEAS ++GHPT VLVR STL++PS+S +++FKNLGV F+
Sbjct: 1 MTSKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFL 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
+GD+ +H SLVN+IKQ DVVISTVGH+LL Q KII+AIKEAGNV RFFPSEFGNDVDR
Sbjct: 61 LGDLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRFFPSEFGNDVDRV 120
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
VEPAKS Y KA+IRR +EAEGIPYTYV F GYFLP L QPGA + PRDKV++
Sbjct: 121 F-TVEPAKSAYA-TKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIV 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGNPKAV+NKE+DI TYTI AVDDPRTLNK LYI+PP N YSFNDLVSLWE KIGKTL
Sbjct: 179 LGDGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKTL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
ER YV EEQLLK I E++PP NV+LS+ H VF+ G T+FEIEPSFGVEAS+L+PDVKYT
Sbjct: 239 ERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKYT 298
Query: 301 TVDEYLNQFV 310
TVDE LNQ+V
Sbjct: 299 TVDEILNQYV 308
|
|
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 212/312 (67%), Positives = 249/312 (79%)
Query: 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
MA+ KSKIL IGGTGYIGKF+VEAS KAGH TF LVRE+TLS P K + + FK+LGV
Sbjct: 1 MATEKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTI 60
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ GD+ +HESLV AIKQVDVVISTVG + DQ KII+AIKEAGNV RF PSEFG DVDR
Sbjct: 61 LHGDLNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDR 120
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ--PGAAAPPRDK 177
AVEPAKS + K +IRR +EAEGIPYTY + CF GY+LP L+Q PG +PPRDK
Sbjct: 121 T-SAVEPAKSAFAG-KIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDK 178
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V ILGDGN KAV NKE+DIA YTIKAVDDPRTLNK LYI+P N S N++V+LWE+KIG
Sbjct: 179 VTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIG 238
Query: 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297
K+LE+ ++ EEQLLK+IQE+ P NV+LSI H+VF+NG TN IEPSFGVEAS+L+PDV
Sbjct: 239 KSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDV 297
Query: 298 KYTTVDEYLNQF 309
KYT+VDEYL+ F
Sbjct: 298 KYTSVDEYLSYF 309
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 202/312 (64%), Positives = 247/312 (79%)
Query: 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
MAS KSKIL IGGTG+IGK I+EASVKAGH T LVRE++LS P+K + + +FK+ GV
Sbjct: 1 MASEKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTL 60
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ GD+ +HESLV AIKQ DVVISTVG + DQ KII+AIKEAGNV RF PSEFG DVD+
Sbjct: 61 LHGDLNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGMDVDK 120
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ--PGAAAPPRDK 177
+ AVEPAKS + K + RR +EAEGIPYTY+ + F GY+LP L+Q PG +PPRDK
Sbjct: 121 S-SAVEPAKSAF-GRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDK 178
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V I GDGN KAV NKE+DIA YTIKAVDDPRTLNK LYI PP N S N++V+LWE+KIG
Sbjct: 179 VKIFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKIG 238
Query: 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297
K++E+ Y+SEEQ+ K+IQE+ P NV+LSI H+VF+ G QTNF IEPSFG EAS+L+PD+
Sbjct: 239 KSVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPDI 298
Query: 298 KYTTVDEYLNQF 309
KYT++DEYL+ F
Sbjct: 299 KYTSIDEYLSYF 310
|
|
| TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 199/322 (61%), Positives = 242/322 (75%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
KSKIL IGGTGY+G+FIVE S KAG+PTF LVRE++LS P KS+ + FK+LGV + GD
Sbjct: 5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHGD 64
Query: 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGA 123
+ +HESLV AIKQVDVVIST+GH + DQ KII+AIKEAGNV RF P+EFG DV+R A
Sbjct: 65 LNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFLPAEFGIDVERT-SA 123
Query: 124 VEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ--PGAAA--------- 172
VEPAKS++ K +IRRA+EAEGIPYTYV S C G++L LLQ G +
Sbjct: 124 VEPAKSLFAG-KVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRDKAIIF 182
Query: 173 -----PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFND 227
PPRDKV ILGDGN K V NKE+D+A Y IKAVDD RTLNK LYI PP NI S N+
Sbjct: 183 GDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNILSMNE 242
Query: 228 LVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFG 287
+V+LWE+KIGK+LE+ ++SEEQ+LK+IQ P +V SI H+VF+ G QT+F IEP FG
Sbjct: 243 MVTLWEKKIGKSLEKTHISEEQILKSIQV---PIDVFKSINHAVFVKGDQTSFTIEPWFG 299
Query: 288 VEASQLFPDVKYTTVDEYLNQF 309
EAS L+PDVKYT++DEYL+QF
Sbjct: 300 EEASVLYPDVKYTSIDEYLSQF 321
|
|
| TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 184/310 (59%), Positives = 227/310 (73%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
SKIL IG TG IGK +VE S K+GH TF LVRE++LS P K+QL++ FK+LGV + G +
Sbjct: 3 SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62
Query: 65 LNHESLVNAIKQVDVVISTVGH--ALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG 122
+ ESLV AIKQVDVVIS VG + +Q II AIKE+GNV RF PSEFGNDVDR
Sbjct: 63 SDKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFLPSEFGNDVDRTV- 121
Query: 123 AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAA--APPRDKVVI 180
A+EP S + KA+IRRA+EA IPYTYV S CF G F+P L Q +PPRDKV I
Sbjct: 122 AIEPTLSEFI-TKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKVSI 180
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
GN KA+ N E+DI YT+KAVDDPRTLNK LYI PP I S ND+V LWE KIGKTL
Sbjct: 181 YDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGKTL 240
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YVSEE+LLK IQE+ PP + ++ + H++ + T+F I+PSFGVEAS+L+P+VKYT
Sbjct: 241 EKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDFTSFTIDPSFGVEASELYPEVKYT 300
Query: 301 TVDEYLNQFV 310
+VDE+LN+F+
Sbjct: 301 SVDEFLNRFI 310
|
|
| TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 141/304 (46%), Positives = 196/304 (64%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
KS++L IG TG +G ++ S+++GHPTF L+R +TLS KS L D GV + G
Sbjct: 7 KSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDKLKS-LSD----AGVTLLKGS 61
Query: 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGA 123
+ + SL A+ +VDVVIS + + DQ ++ IK+AG++ RF P+E+G + D+
Sbjct: 62 LEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFIPAEYGANPDKTQ-- 119
Query: 124 VEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD 183
V +Y K+ IR +E+EGIPYTY+ F LP+L+QPG +PP DKV + GD
Sbjct: 120 VSDLDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKVTVFGD 179
Query: 184 GNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243
GN KAV+ + D+A +TIK +DDPRTLNK LY+ PPGNI S NDLV LWE KI K LE+
Sbjct: 180 GNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEKKLEKT 239
Query: 244 YVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVD 303
+ +E QLLK I+E P N+ + +SVF+ G T F+IE GV ++L+PDVKY TV
Sbjct: 240 FATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPDVKYMTVS 299
Query: 304 EYLN 307
E+L+
Sbjct: 300 EFLD 303
|
|
| TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 140/313 (44%), Positives = 190/313 (60%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
K+++L +G TGYIGK IV A + GH T+VL R K QL FK LG V G
Sbjct: 9 KTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEGS 68
Query: 64 VLNHESLVNAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVTRFFPSEFGNDV 117
+H+SLV+A+K VDVV+S + H +L Q+K++ AIKEAGNV RF PSEFG D
Sbjct: 69 FSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILV-QLKLVEAIKEAGNVKRFLPSEFGMDP 127
Query: 118 DRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK 177
R A+ P + + D K +R+A+EA GIPYTYV CF YF NL Q PP++K
Sbjct: 128 PRMGHALPPGRETF-DQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEK 186
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V I GDGN K V+ EDDIA YT K ++DPRTLNK + I+PP N+ + +LV +WE+ G
Sbjct: 187 VNIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTG 246
Query: 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297
K LE+ ++ + L NI++ P + ++ +F G T+ E+ EAS L+PDV
Sbjct: 247 KELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLTDHEVGED--EEASSLYPDV 304
Query: 298 KYTTVDEYLNQFV 310
KY +D+YL F+
Sbjct: 305 KYKRMDDYLRMFL 317
|
|
| TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 138/312 (44%), Positives = 190/312 (60%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
K+++L +GGTG +G+ IV A + GH T+VL R K QLL FK LG + V G
Sbjct: 9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEGS 68
Query: 64 VLNHESLVNAIKQVDVVISTVG--HALLAD---QVKIIAAIKEAGNVTRFFPSEFGNDVD 118
+H+SLV+A+KQVDVV+S + H + Q+K++AAIKEAGNV RF PSEFG D
Sbjct: 69 FSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDPS 128
Query: 119 RAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV 178
R A+ P + D K IR A++A GI +TY+ CF YF NL Q G PP++KV
Sbjct: 129 RMGHAMPPGSETF-DQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNKV 187
Query: 179 VILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238
I GDGN K V+ EDD+A YT K ++DPRTLNK +Y++P NI + +LV +WE+ K
Sbjct: 188 DIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTEK 247
Query: 239 TLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVK 298
LE+ YVS L +I++ L ++ ++ G T+ E+ EA++L+PDVK
Sbjct: 248 ELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDHEVGDD--EEATKLYPDVK 305
Query: 299 YTTVDEYLNQFV 310
Y +DEYL FV
Sbjct: 306 YKRMDEYLKIFV 317
|
|
| ASPGD|ASPL0000047359 AN8968 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 71/269 (26%), Positives = 129/269 (47%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTF----VLVRESTLSAPSKSQLLDHFKNLGVN 58
+KS +L G TG IG +I A++ F + +STL+ +K ++ + V+
Sbjct: 2 TKSNLLIFGATGAIGSYIT-AAITDARDEFGRIGIFTSQSTLTKKTKE--INALREKAVD 58
Query: 59 FVVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVD 118
+VGDV + + ++ A D V+S +G ++A QV ++ E+ + RF PSE+G D++
Sbjct: 59 ILVGDVTSKDEVLKAFDGFDTVVSALGRGVIAQQVHLVQWADESPQIKRFLPSEYGTDIE 118
Query: 119 RAHGAVEPAKSVYYDVKARIRRAV-EAEGIPYTYVES--YCFDGYFLPNLLQP--GAAAP 173
+ + A + K ++R A+ E + + Y +V + Y ++L P G+
Sbjct: 119 YS---LASANEKPHQQKLKVRAAIRETKNLEYAFVVTGPYADVPFYLGASKNPRGGSFDV 175
Query: 174 PRDKVVILGDGNPKAVYNKEDDIATYTIKAVD--DP---RTLNKNLYIQPPGNIYSFNDL 228
K V+LGDGN + D+ + + + D R L N + P ND+
Sbjct: 176 KNKKAVLLGDGNGRISLVACADVGKFVVHTLTHWDKARGRALKLNSFTTTP------NDI 229
Query: 229 VSLWERKIGKTLEREYVSEEQLLKNIQEA 257
++ +E++ G EY S +QL + +EA
Sbjct: 230 LAEFEKQTGNKWSVEYTSLKQLKQYEKEA 258
|
|
| ASPGD|ASPL0000072559 AN8815 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 78/259 (30%), Positives = 117/259 (45%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTF---VLVRESTLSAPSKSQLLDHFKNLGVNF 59
S++ +L IG G G I ++ HPTF L+R + P+ L D GV+
Sbjct: 2 SRTTVLLIGAAGETGGSIAAGLLE--HPTFEIHALIRPRSAQKPAVLALQDK----GVHI 55
Query: 60 VVGDVLN-HESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVD 118
D+ + E L A+ +DVVIS VG A DQ+ I A K+AG V RF P F
Sbjct: 56 RKCDLKSSEEELEKALSDIDVVISCVGSAEQQDQIPIANAAKKAG-VKRFIPCGFIT--- 111
Query: 119 RAHGAVEPAKSVYY--DVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAA--APP 174
V P + + D K + ++ +PYT ++ + P L + G A
Sbjct: 112 -----VAPPGGIMWLRDEKEAVYNHIKQLHLPYTIIDVGWWYQLAYPRL-ESGKLDYAMT 165
Query: 175 RDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWER 234
I+GDGN DI Y + + D RTLNK ++ + + N++ L E
Sbjct: 166 TSNNEIVGDGNTPLALTDLRDIGRYVARIITDDRTLNKMVFAY--NTVLTQNEIFGLLEE 223
Query: 235 KIGKTLEREYVSEEQLLKN 253
G+ + R Y+SEE L++N
Sbjct: 224 ISGEQITRNYISEE-LVQN 241
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P52575 | IFR_MEDSA | 1, ., 3, ., 1, ., 4, 5 | 0.5514 | 0.9903 | 0.9654 | N/A | no |
| P52576 | IFR_PEA | 1, ., 3, ., 1, ., 4, 5 | 0.5514 | 0.9903 | 0.9654 | N/A | no |
| P52579 | IFRH_TOBAC | 1, ., 3, ., 1, ., - | 0.6451 | 0.9935 | 0.9935 | N/A | no |
| P52580 | IFRH_MAIZE | 1, ., 3, ., 1, ., - | 0.5819 | 0.9935 | 0.9967 | N/A | no |
| P52578 | IFRH_SOLTU | 1, ., 3, ., 1, ., - | 0.7516 | 0.9935 | 1.0 | N/A | no |
| E1U332 | ALL12_OLEEU | 1, ., 3, ., 1, ., - | 0.7064 | 0.9935 | 1.0 | N/A | no |
| Q00016 | IFR_CICAR | 1, ., 3, ., 1, ., 4, 5 | 0.5576 | 0.9903 | 0.9654 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.3.1 | 0.963 |
| 3rd Layer | 1.17.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.3.1.45 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | PCBER3 | SubName- Full=Putative uncharacterized protein; (307 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 310 | |||
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 1e-96 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 4e-77 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 9e-23 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-21 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-19 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 2e-13 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 5e-13 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 3e-12 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 2e-10 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 2e-09 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 5e-09 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 6e-09 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 8e-08 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 6e-07 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 2e-06 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 2e-05 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-05 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 3e-05 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 5e-05 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 9e-05 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-04 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 2e-04 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 2e-04 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 4e-04 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 5e-04 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 7e-04 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 8e-04 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 8e-04 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 0.001 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 0.001 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 284 bits (729), Expect = 1e-96
Identities = 127/237 (53%), Positives = 150/237 (63%), Gaps = 14/237 (5%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL G TGY G +V AS+KAGHP LVR+ KS+L K GV V GD+ +
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDP------KSELAKSLKAAGVELVEGDLDD 54
Query: 67 HESLVNAIKQVDVVISTVG---HALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGA 123
HESLV A+K VDVV S G + D K+ A KEAG V F PSEFGNDVDR++G
Sbjct: 55 HESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDVDRSNG- 112
Query: 124 VEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD 183
VEPA + D KA + R + A GIPYT+V + F G FL NL PG APPRDKV +LG
Sbjct: 113 VEPAVPHF-DSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLGP 171
Query: 184 GNPKAVYN-KEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239
GNPKAV E+DI TY IK +DDPR L K YI+PPGNI S N++ LW +KIGKT
Sbjct: 172 GNPKAVPLDDEEDIGTYVIKILDDPRKL-KGKYIRPPGNILSGNEIAELWSKKIGKT 227
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 236 bits (604), Expect = 4e-77
Identities = 110/307 (35%), Positives = 154/307 (50%), Gaps = 32/307 (10%)
Query: 6 KILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
KI G TG +G IV A + + G VL R S+ S+ F+ GV V D
Sbjct: 1 KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSN-------EFQPSGVKVVPVDY 53
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAV 124
+HESLV A+K VD VIS +G A + DQ+K+I A AG V RF PSEFG D DR GA+
Sbjct: 54 ASHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG-VKRFIPSEFGVDYDR-IGAL 111
Query: 125 EPAKSVYYDVKARIRRAVEA--EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182
+D K +RR + A G+P+TYV + F Y L L I G
Sbjct: 112 PLL--DLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVV--DLANRTATIYG 167
Query: 183 DGNPKAVYNKEDDIATYTIKAVD-DPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241
DG K + +DI +A+ RTLN+ +++ G++ + N+L++L ER G+ E
Sbjct: 168 DGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVA--GDVVTQNELIALVERVTGRKFE 225
Query: 242 REYVSEEQLLKNIQEAAP--PQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLF-PDVK 298
R YVSEE+LL+ + EAAP N +++ H + + G VE S +K
Sbjct: 226 RTYVSEEELLEELIEAAPAGLLNYVIAFLHGLGIGGG----------DVEKSDAEYLGLK 275
Query: 299 YTTVDEY 305
TV+E
Sbjct: 276 VETVEEL 282
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 9e-23
Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 40/221 (18%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+L +G TG +G+ +V + G+ LVR+ PS+++ L+ G VVGD+
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRD-----PSQAEKLEA---AGAEVVVGDLT 52
Query: 66 NHESLVNAIKQVDVVISTVG-------HALLAD---QVKIIAAIKEAGNVTRF-FPSEFG 114
+ ESL A++ +D VIS G D + +I A K+AG V RF S G
Sbjct: 53 DAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSSIG 111
Query: 115 NDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGA---A 171
D +H A Y D K + + A G+ YT +++PG
Sbjct: 112 AD-KPSHP--LEALGPYLDAKRKAEDYLRASGLDYT--------------IVRPGGLTDD 154
Query: 172 APPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212
+VV+ GDG D+A +A+D P + K
Sbjct: 155 PAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGK 195
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 2e-21
Identities = 57/220 (25%), Positives = 81/220 (36%), Gaps = 54/220 (24%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL +G TG+IG+ + ++ GH +LVR ++ L V V GD+ +
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVR--------NTKRLSKEDQEPVAVVEGDLRD 52
Query: 67 HESLVNAIKQVDVVISTVG------HALLAD---QVKIIAAIKEAGNVTRFFPSEFGNDV 117
+SL +A++ VDVVI G D ++ A KEAG V F
Sbjct: 53 LDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFISSLGAY 111
Query: 118 DRAHGAVEPAKSVYY-DVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD 176
H EP+ S Y VKA+ + +PYT V +PG
Sbjct: 112 GDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIV--------------RPG------- 150
Query: 177 KVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216
VI G D+A AV P N+
Sbjct: 151 --VIYG------------DLARAIANAVVTPGKKNETFNA 176
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 1e-19
Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 42/278 (15%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL G TG +G +VE + LVR P K++ F GV GD +
Sbjct: 1 ILVTGATGKLGTAVVELLLAKVASVVALVR-----NPEKAKA---FAADGVEVRQGDYDD 52
Query: 67 HESLVNAIKQVDVV--ISTVGHALLADQVK-IIAAIKEAGNVTRFFPSEFGNDVD----- 118
E+L A + VD + IS Q K I A K+AG V +
Sbjct: 53 PETLERAFEGVDRLLLISPSDLEDRIQQHKNFIDAAKQAG-VKHIVYLSASGADEDSPFL 111
Query: 119 --RAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD 176
R HGA E + +EA GIPYT + G+F+ NLL+ +
Sbjct: 112 LARDHGATE--------------KYLEASGIPYTILR----PGWFMDNLLEFLPSILEEG 153
Query: 177 KVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKI 236
+ G+ K + DIA A+ +P K +Y S+ +L ++ +
Sbjct: 154 TIYGPA-GDGKVAFVDRRDIAEAAAAALTEPGHEGK-VYNLTGPEALSYAELAAILSEAL 211
Query: 237 GKTLEREYVSEEQLLKNIQEAAPPQ---NVILSIYHSV 271
GK + VS ++ + + A P+ ++ S+Y ++
Sbjct: 212 GKPVRYVPVSPDEAARELLAAGLPEGFAALLASLYAAI 249
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-13
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 42/230 (18%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KI IG TG G IV ++ GH LVR ++L + L V GDVL
Sbjct: 1 KIAIIGATGRTGSAIVREALARGHEVTALVR-------DPAKLPAEHEKL--KVVQGDVL 51
Query: 66 NHESLVNAIKQVDVVISTVG-------HALLADQVK-IIAAIKEAGNVTRF-FPSEFGND 116
+ E + A++ D VIS +G L ++ + I++A+K AG V R G+
Sbjct: 52 DLEDVKEALEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAG-VKRLIVVGGAGSL 110
Query: 117 VDRAHGAV--------EPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQP 168
DR + + V D AR+ + + G+ +T V P L
Sbjct: 111 DDRPKVTLVLDTLLFPPALRRVAED-HARMLKVLRESGLDWTAVR--------PPALFDG 161
Query: 169 GAAAPPRDKVVILGDGNPK--AVYNKEDDIATYTIKAVDDPRTLNKNLYI 216
G + + K + ++ D+A + + ++ P + K I
Sbjct: 162 G---ATGGYYRVELLVDAKGGSRISRA-DLAIFMLDELETPEHVRKRPTI 207
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 5e-13
Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 18/152 (11%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
I IG TG G+ +V+ + GH L R + S+ GV V D+ +
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSR-------NPSKAPAP----GVTPVQKDLFD 49
Query: 67 HESLVNAIKQVDVVISTVG-HALLADQVK-IIAAIKEAGNVTRF-FPSEFGNDVDRAHGA 123
L A+ VD V+ G +D VK ++ A AG V R S G D
Sbjct: 50 LADLAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAG-VRRIVVVSAAGLYRDEPGTF 108
Query: 124 VEPAKSVYYDV---KARIRRAVEAEGIPYTYV 152
++ KA + A G+ +T V
Sbjct: 109 RLDDAPLFPPYARAKAAAEELLRASGLDWTIV 140
|
Length = 182 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 3e-12
Identities = 60/250 (24%), Positives = 91/250 (36%), Gaps = 30/250 (12%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
KIL G TG++G +V + GH VR P + L GV V+GD+
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRN-----PEAAAALA----GGVEVVLGDL 51
Query: 65 LNHESLVNAIKQVDVVISTVG------HALLADQVKIIAAIKEAGNVTRFFPSEFGNDVD 118
+ +SLV K VD V+ G ++ A + AG + V
Sbjct: 52 RDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHG-------VS 104
Query: 119 RAHGAVEPAKSV-YYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK 177
+ + A KA + A+ + GIPYT + F Y AA
Sbjct: 105 LSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAF--YLGAGAAFIEAAEAAGLP 162
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237
V+ G G + DD+A A+D P T + + P + +L S + IG
Sbjct: 163 VIPRGIGRLSPIA--VDDVAEALAAALDAPATAGRTYELAGP-EALTLAELASGLDYTIG 219
Query: 238 KTLEREYVSE 247
+ + E
Sbjct: 220 R--PVGLIPE 227
|
Length = 275 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 2e-10
Identities = 60/254 (23%), Positives = 93/254 (36%), Gaps = 42/254 (16%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDV 64
+ G TG+IG+++V K G V R + ++ L +LG V FV D+
Sbjct: 2 VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRC-----EAYARRLLVMGDLGQVLFVEFDL 56
Query: 65 LNHESLVNAIKQVDVVISTVG-------------HALLADQVKIIAAIKEAGNVTRFFP- 110
+ ES+ A++ DVVI+ VG H + +A + V R
Sbjct: 57 RDDESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGP---ERLAKAAKEAGVERLIHI 113
Query: 111 SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYV---ESYCFDGYFLPNLLQ 167
S G D + + S Y KA AV T V + + FL +
Sbjct: 114 SALGADAN--------SPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNRFAK 165
Query: 168 PGAAAPPRDKVVILGDGNPKAVYNK--EDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSF 225
A P G + + D+A +A+ DP T K + P +Y+
Sbjct: 166 LLAFLP-----FPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGP-KVYTL 219
Query: 226 NDLVSLWERKIGKT 239
+LV L R G+
Sbjct: 220 AELVELLRRLGGRK 233
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-09
Identities = 64/270 (23%), Positives = 105/270 (38%), Gaps = 46/270 (17%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KIL IGGT +IGK +VE + AGH V R T + GV +VGD
Sbjct: 2 KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPE----------GVEHIVGDRN 51
Query: 66 NHESLVNAIK--QVDVVISTVGHALLADQVKIIAAIKEAGNVTRF-FPS------EFGND 116
+ ++L + DVV+ T+ + QV+ + G V ++ F S + G
Sbjct: 52 DRDALEELLGGEDFDVVVDTIAYT--PRQVERALDAFK-GRVKQYIFISSASVYLKPGRV 108
Query: 117 VDRAHGAVEPAKSVYYDVKARIRRAVEAE-------GIPYTYVE-SYCFDG--------Y 160
+ + EP D R AE PYT V Y + Y
Sbjct: 109 ITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAY 168
Query: 161 FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPG 220
F L + +++ GDG+ + D+A + A +P+ + I
Sbjct: 169 FFDRLAR-------GRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDE 221
Query: 221 NIYSFNDLVSLWERKIGKTLEREYVSEEQL 250
+ ++++L+ + +GK E +V E+ L
Sbjct: 222 AV-TWDELLEACAKALGKEAEIVHVEEDFL 250
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL G TG++G +V A + G+ LVR S + LLD L V V GD+ +
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSG-----SDAVLLDG---LPVEVVEGDLTD 52
Query: 67 HESLVNAIKQVDVVISTVGHA 87
SL A+K D V
Sbjct: 53 AASLAAAMKGCDRVFHLAAFT 73
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 6e-09
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST--LSAPSKSQLLDHFKNLGVNF 59
+L +G TGYIGKF+V V+ G+ + RE + K G
Sbjct: 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP--GAEV 115
Query: 60 VVGDVLNHESLVNAIKQ----VDVVIS 82
V GDV + +SL + VDVV+S
Sbjct: 116 VFGDVTDADSLRKVLFSEGDPVDVVVS 142
|
Length = 390 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 8e-08
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTF---VLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
IL G TG G +V A +K P F L R S+P+ L GV V GD
Sbjct: 1 ILVFGATGKQGGSVVRALLK--DPGFKVRALTR--DPSSPAAKAL----AAPGVEVVQGD 52
Query: 64 VLNHESLVNAIKQVDVV--ISTVGHALLADQVK----IIAAIKEAGNVTRF-FPSEFGND 116
+ + ESL A+K V V ++ A D++ ++ A K AG V F F S D
Sbjct: 53 LDDPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAG-VQHFVFSSVP--D 109
Query: 117 VDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD 176
V++ AV ++D KA + + A G+P T + +F+ N L P A D
Sbjct: 110 VEKLTLAVP-----HFDSKAEVEEYIRASGLPATILRP----AFFMENFLTPPAPQKMED 160
Query: 177 KV---VILGDGNPKAVYNKEDDIATYTIKAVDDP-RTLNKNLYIQPPGNIYSFNDLVSLW 232
V+ D + K DI DP + K + + G+ + ++ + +
Sbjct: 161 GTLTLVLPLDPDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELA--GDELTPEEIAAAF 218
Query: 233 ERKIGKTLEREYVSEEQLLK 252
+ +GK YV E+ L+
Sbjct: 219 SKVLGK--PVTYVQVEEWLR 236
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+L +G G I + EA+ + V E TL + +LL H K+ V V GD L
Sbjct: 2 KVLILGANGEIAR---EATTMLLENSNV---ELTLFLRNAHRLL-HLKSARVTVVEGDAL 54
Query: 66 NHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTR-FFPSEFG--NDVDRAHG 122
N + L A++ DVV + +G L Q + + +A V R + + G ++V G
Sbjct: 55 NSDDLKAAMRGQDVVYANLGGTDLDQQAENVVQAMKAVGVKRLIWTTSLGIYDEVPGKFG 114
Query: 123 AVEPAKSVYYDVKARIRRA---VEAEGIPYT 150
Y A R++ +E + YT
Sbjct: 115 EWNKEFIGNY--LAPYRKSAAVIENSDLDYT 143
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 2e-06
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 18/111 (16%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KI IG +G G I++ ++K GH +VR SK GV + D+
Sbjct: 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRN-----ASKLAARQ-----GVTILQKDIF 51
Query: 66 NHESLVNAIKQVDVVISTVGHAL---LADQVK----IIAAIKEAGNVTRFF 109
+ SL + + D VIS G K +I A+K AG V R
Sbjct: 52 DLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIEALKGAG-VPRLL 101
|
Length = 211 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 61/256 (23%), Positives = 99/256 (38%), Gaps = 36/256 (14%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL G TG IG + ++AG P LVR + G VVGD+ +
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVRS-----DER---AAALAARGAEVVVGDLDD 52
Query: 67 HESLVNAIKQVDVV---ISTVGHA-LLADQVKIIA----AIKEAGNVTRFFP-SEFGNDV 117
L A+ VD V A V+ A++EAG V R S G D
Sbjct: 53 PAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAG-VKRVVNLSSVGADP 111
Query: 118 DRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK 177
+ G + ++ ++ + A G+P ++ +F+ NLL A R
Sbjct: 112 ESPSGLI----RGHWLMEQVLNWA----GLPVVHLRP----AWFMENLLS--QAPSIRKA 157
Query: 178 VVILG--DGNPKAVYNKEDDIATYTIKAVDDP-RTLNKNLYIQPPGNIYSFNDLVSLWER 234
V+ G+ + DDIA K + DP ++ + P ++ + N++ + R
Sbjct: 158 GVLALPFPGDGRLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDL-TMNEIAAALSR 216
Query: 235 KIGKTLEREYVSEEQL 250
+G+ + V EEQ
Sbjct: 217 VLGRPVRYVPVPEEQW 232
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 3e-05
Identities = 56/271 (20%), Positives = 92/271 (33%), Gaps = 52/271 (19%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
+IL GG G+IG +VE + AGH L R P S GV FVV D+
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS---------GVEFVVLDLT 52
Query: 66 NHESLVNAIKQV-DVVI-----STVGHALLADQVK-----------IIAAIKEAGNVTRF 108
+ + + K V D VI S+V + +D + ++ A + AG
Sbjct: 53 DRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV 112
Query: 109 FPS--------EFGNDVDRAHGAVEPAKSVY----YDVKARIRRAVEAEGIPYTYV---- 152
F S +D G P + Y + +R G+P +
Sbjct: 113 FASSVSVVYGDPPPLPIDEDLGPPRPL-NPYGVSKLAAEQLLRAYARLYGLPVVILRPFN 171
Query: 153 -----ESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207
+ + ++ +VI GDG+ + DD+A + A+++P
Sbjct: 172 VYGPGDKPDLSSGVVSAFIR--QLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP 229
Query: 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238
N I + +L +G
Sbjct: 230 DGGVFN--IGSGTAEITVRELAEAVAEAVGS 258
|
Length = 314 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 49/252 (19%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
+L IG TG +G+ IV ++ G+ LVR K+ L K G V GD+
Sbjct: 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVRNL-----RKASFL---KEWGAELVYGDLSL 54
Query: 67 HESLVNAIKQVDVVI--STVGHALLADQVKI-----IAAIKEA--GNVTRF-FPSEFGND 116
E+L + K V +I ST + L + +I +A I+ A + RF F S
Sbjct: 55 PETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL--- 111
Query: 117 VDRAHGAVEPAKSVYYDV-----KARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAA 171
Y + K+ I + ++ GIPYT + G+F + Q A
Sbjct: 112 ----------NAEQYPYIPLMKLKSDIEQKLKKSGIPYTI---FRLAGFFQGLISQ--YA 156
Query: 172 APPRDK--VVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFN--D 227
P +K + I + + Y D A + +K++ P T NK P S+N +
Sbjct: 157 IPILEKQPIWITNE-STPISYIDTQDAAKFCLKSLSLPETKNK---TFPLVGPKSWNSSE 212
Query: 228 LVSLWERKIGKT 239
++SL E+ G+
Sbjct: 213 IISLCEQLSGQK 224
|
Length = 317 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+ G TG+IG +V V AGH L R S ++L + G GD+
Sbjct: 2 KVFVTGATGFIGSAVVRELVAAGHEVVGLAR----SDAGAAKL----EAAGAQVHRGDLE 53
Query: 66 NHESLVNAIKQVDVVIST-----VGHALLADQV--KIIAAIKEA 102
+ + L A + D VI + A +V + I A+ EA
Sbjct: 54 DLDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEA 97
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
+L G TGY+G +V ++ GH LVR S +L D + V V GD+ +
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVR-------SPEKLADRPWSERVTVVRGDLED 53
Query: 67 HESLVNAIKQVDVVISTVGHALLA 90
ESL A++ +D V H++ +
Sbjct: 54 PESLRAALEGIDTAYYLV-HSMGS 76
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 11 GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV------ 64
GGTG++G+ +V+ ++ G VLVR +L + + V + GD+
Sbjct: 5 GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPNLG 64
Query: 65 LNHESLVNAIKQVDVVI 81
L+ + +VD VI
Sbjct: 65 LSAAASRELAGKVDHVI 81
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+L GG GYIG V ++AG+ VL S + L + + + F GD+
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSN----GHREALPRIEKIRIEFYEGDIR 56
Query: 66 NHESLVNAIKQ--VDVVI 81
+ +L + +D VI
Sbjct: 57 DRAALDKVFAEHKIDAVI 74
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 52/220 (23%), Positives = 78/220 (35%), Gaps = 55/220 (25%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
IL GGTG+IG +V ++ G+ VL R + + F GD+ +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES---------LNTGRIRFHEGDLTD 51
Query: 67 HESLVNAIK--QVDVVI-----STVGHAL----------LADQVKIIAAIKEAGNVTRF- 108
++L + Q D VI S VG + + ++++ A + AG V RF
Sbjct: 52 PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFV 110
Query: 109 FPS---EFGNDVDRA-HGAVEPAKSVYYDV-KARIRRAVEAEGIPYTYVESYCFDGYFL- 162
F S +G+ D Y K R VEA Y +Y L
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEA------YARAYGLRAVILR 164
Query: 163 -PNLLQPGAAAPPRDKV--------------VILGDGNPK 187
N+ PG P V ++LGDG +
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQR 204
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 8 LSIGGTGYIGKFIVEASVKAGHPTFVLV---RESTLSAPSKSQLLDHFKNLGV-NFVVGD 63
L GG G++G+ IV ++ G V V R S +LL+ F L V ++ GD
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFS-------PELLEDFSKLQVITYIEGD 53
Query: 64 VLNHESLVNAIKQVDVVISTVG 85
V + + L A++ DVVI T
Sbjct: 54 VTDKQDLRRALQGSDVVIHTAA 75
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KIL GG GYIG V +++GH +L LS S+ L + V FV GD+
Sbjct: 1 KILVTGGAGYIGSHTVRQLLESGHEVVIL---DNLSNGSREALPRGERITPVTFVEGDLR 57
Query: 66 NHESL--VNAIKQVDVVI 81
+ E L + ++D VI
Sbjct: 58 DRELLDRLFEEHKIDAVI 75
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+L G TG++G +V ++ G VLVR S + L+ L V V GD+
Sbjct: 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-----PTSDRRNLE---GLDVEIVEGDLR 53
Query: 66 NHESLVNAIKQVDVVI 81
+ SL A+ +
Sbjct: 54 DPASLRKAVAGCRALF 69
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN 66
+L IG G +G+ + + G + S A L L + D N
Sbjct: 1 VLIIGA-GGVGQGVAPLLARHGDLEITVADRSLEKAQ---ALAAPKLGLRFIAIAVDADN 56
Query: 67 HESLVNAIKQVDVVISTVG 85
+E+LV +K+ D+VI+
Sbjct: 57 YEALVALLKEGDLVINLAP 75
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 25/123 (20%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKNLGVN-----F 59
+L G TG+I IVE +KAG+ VR T+ + SKS L K G N
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYK----VR-GTVRSLSKSAKLKALLKAAGYNDRLEFV 55
Query: 60 VVGDVLNHESLVNAIKQVDVVISTV----------GHALLADQVK----IIAAIKEAGNV 105
+V D+ + A+K VD VI ++ V+ ++ A K AG+V
Sbjct: 56 IVDDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSV 115
Query: 106 TRF 108
R
Sbjct: 116 KRV 118
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
+L G G+IG + E ++ GH L ++ + LLD+ + +F+ GDV
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRALDI---YNSFNSWGLLDNAVHDRFHFISGDVR 57
Query: 66 NHESLVNAIKQVDVVI 81
+ + +K+ DVV
Sbjct: 58 DASEVEYLVKKCDVVF 73
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
++L +GG G+IG +V+A ++ G V R GV+++ GD
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLG---------GVDYIKGDYE 51
Query: 66 NHESLVNAIKQVDVVI 81
N L +A+ +D VI
Sbjct: 52 NRADLESALVGIDTVI 67
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 310 | |||
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 100.0 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.98 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.96 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.95 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.95 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.94 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.94 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.94 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.94 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.94 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.94 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.93 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.93 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.93 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.93 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.93 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.93 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.93 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.93 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.92 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.92 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.92 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.92 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.92 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.92 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.91 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.9 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.9 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.9 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.9 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.89 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.89 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.88 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.88 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.86 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.86 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.84 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.83 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.82 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.81 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.8 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.8 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.8 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.79 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.77 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.76 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.76 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.76 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.75 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.75 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.75 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.75 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.73 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.71 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.71 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.71 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.7 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.7 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.7 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.69 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.68 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.67 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.67 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.66 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.66 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.66 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.66 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.65 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.65 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.65 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.65 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.65 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.65 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.65 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.64 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.64 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.64 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.64 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.64 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.64 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.63 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.63 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.63 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.63 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.62 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.62 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.61 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.61 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.6 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.6 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.6 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.59 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.59 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.59 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.58 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.58 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.58 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.58 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.56 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.55 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.55 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.55 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.54 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.54 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.53 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.53 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.53 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.52 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.51 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.51 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.5 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.5 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.5 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.49 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.48 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.48 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.48 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.48 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.47 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.47 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.47 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.46 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.46 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.46 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.45 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.45 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.45 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.45 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.45 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.44 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.44 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.42 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.41 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.39 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.38 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.34 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.33 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.32 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.31 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.31 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.3 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.3 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.29 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.26 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.24 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.2 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.18 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.14 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.13 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.11 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.1 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 99.09 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.08 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.08 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.07 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.07 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.04 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.98 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.91 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.81 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.8 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.79 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.76 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.72 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.71 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.71 | |
| PLN00106 | 323 | malate dehydrogenase | 98.66 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.59 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.59 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.53 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.53 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.53 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.52 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.39 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.39 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.38 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.33 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.31 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 98.29 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.25 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.24 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.19 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.18 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.17 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.16 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.16 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.12 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 98.12 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.11 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 98.11 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.09 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.04 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.04 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.03 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 98.03 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.99 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.97 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.91 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.9 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 97.9 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.89 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.85 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.84 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.83 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.79 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.79 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.76 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.73 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.71 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 97.69 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.67 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.66 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.63 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 97.63 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.62 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.61 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.61 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.59 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.58 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.55 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.52 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.49 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.48 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.47 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.47 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.45 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.42 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.41 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.41 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.37 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.37 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.36 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.35 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 97.34 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.33 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.29 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.29 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.29 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.29 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.29 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.27 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.25 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.24 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.23 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.22 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.21 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.21 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.21 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.2 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 97.18 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.18 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.16 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.16 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.15 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.13 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 97.13 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.13 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.13 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 97.12 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.11 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.09 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.08 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.07 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.06 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.06 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.04 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 97.04 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.03 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.03 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.02 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.01 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 97.01 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 97.01 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.0 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.99 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.99 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.98 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.98 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.97 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.97 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.97 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.96 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.95 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.95 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 96.94 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.94 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.93 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.92 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.92 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.92 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.9 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.9 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.88 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.88 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.88 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.88 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.87 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.86 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.85 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.85 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 96.84 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.84 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 96.84 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.83 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.82 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.81 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.8 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.78 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.78 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.77 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.77 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.76 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.76 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.76 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 96.75 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.75 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.75 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.75 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.74 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.72 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.71 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.71 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 96.71 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.7 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.7 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.68 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 96.68 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 96.68 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.68 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.68 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.67 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.67 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.66 | |
| PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.66 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.66 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.66 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.66 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.66 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.64 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.64 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 96.64 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.64 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.63 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.62 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 96.62 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.6 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.6 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 96.59 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.59 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.59 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.57 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.57 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.56 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 96.55 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.54 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.53 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.52 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.51 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.51 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.49 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.49 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 96.48 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.48 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.47 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.47 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 96.45 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.45 |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=254.71 Aligned_cols=268 Identities=20% Similarity=0.287 Sum_probs=207.1
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh------cC-CC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI------KQ-VD 78 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~------~~-~d 78 (310)
+|+||||||++|++++++|+++|++|++++|+.++. ...+++.+.+|+.|++++.+++ ++ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-----------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-----------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-----------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 589999999999999999999999999999995432 1347888899999999999999 57 99
Q ss_pred EEEEcccchh--hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHc-CCCEEEEec
Q 021596 79 VVISTVGHAL--LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAE-GIPYTYVES 154 (310)
Q Consensus 79 ~Vi~~a~~~~--~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~-~~~~~i~rp 154 (310)
.|+++++... .....+++++|+++| ++|||+ |+.+.... . ..+...++++++. +++++++||
T Consensus 70 ~v~~~~~~~~~~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~------~-------~~~~~~~~~l~~~~gi~~tilRp 135 (285)
T TIGR03649 70 AVYLVAPPIPDLAPPMIKFIDFARSKG-VRRFVLLSASIIEKG------G-------PAMGQVHAHLDSLGGVEYTVLRP 135 (285)
T ss_pred EEEEeCCCCCChhHHHHHHHHHHHHcC-CCEEEEeeccccCCC------C-------chHHHHHHHHHhccCCCEEEEec
Confidence 9999988543 456789999999999 999998 54433210 0 1234567788885 999999999
Q ss_pred ceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHH
Q 021596 155 YCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWER 234 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~ 234 (310)
++|++++...+..... ...+. ...+.++.+++|++++|+|++++.++.++...++.|++.+++ .+|+.|+++.+++
T Consensus 136 ~~f~~~~~~~~~~~~~--~~~~~-~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~-~~s~~eia~~l~~ 211 (285)
T TIGR03649 136 TWFMENFSEEFHVEAI--RKENK-IYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPE-LLTYDDVAEILSR 211 (285)
T ss_pred cHHhhhhccccccccc--ccCCe-EEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCc-cCCHHHHHHHHHH
Confidence 9999886432211110 12233 334567888999999999999999998876677889998765 8999999999999
Q ss_pred HhCCCceeeecCHHHHHHHHHhcCCCcchh--HHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 235 KIGKTLEREYVSEEQLLKNIQEAAPPQNVI--LSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 235 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
.+|+++++..+|.+++.+.+...++|.+.. +..++.....|.... . +....+. .|.+|+||+||+++.
T Consensus 212 ~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~--~----~~~~~~~-~G~~p~~~~~~~~~~ 281 (285)
T TIGR03649 212 VLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVR--L----NDVVKAV-TGSKPRGFRDFAESN 281 (285)
T ss_pred HhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcccc--c----cchHHHH-hCcCCccHHHHHHHh
Confidence 999999999999999999998888988765 334444444444211 1 1233344 499999999999975
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=256.65 Aligned_cols=224 Identities=24% Similarity=0.342 Sum_probs=181.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+|||||||+|+++++.|+++||+|++++|+.+ +. ..+...+++++.+|+.|++++.++++++|+|||++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~-----~~---~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~ 72 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR-----KA---SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS 72 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH-----Hh---hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence 58999999999999999999999999999999842 22 23334689999999999999999999999999987
Q ss_pred cchh----------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEe
Q 021596 85 GHAL----------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVE 153 (310)
Q Consensus 85 ~~~~----------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~r 153 (310)
+... ..++.+++++|+++| ++|||+ |+++.... +..+|..+|..+|+++++++++++++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~--------~~~~~~~~K~~~e~~l~~~~l~~tilR 143 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY--------PYIPLMKLKSDIEQKLKKSGIPYTIFR 143 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc--------CCChHHHHHHHHHHHHHHcCCCeEEEe
Confidence 6432 456789999999999 999998 66653211 124567999999999999999999999
Q ss_pred cceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHH
Q 021596 154 SYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWE 233 (310)
Q Consensus 154 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~ 233 (310)
|+.+++++...+.... ..+.... ...++..+++++++|+|++++.+++++...+++|++++++ .+|+.|+++.+.
T Consensus 144 p~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~-~~s~~el~~~~~ 218 (317)
T CHL00194 144 LAGFFQGLISQYAIPI---LEKQPIW-ITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPK-SWNSSEIISLCE 218 (317)
T ss_pred ecHHhhhhhhhhhhhh---ccCCceE-ecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCC-ccCHHHHHHHHH
Confidence 9888776543322111 2233333 3456677899999999999999998776678999998765 899999999999
Q ss_pred HHhCCCceeeecCHHHH
Q 021596 234 RKIGKTLEREYVSEEQL 250 (310)
Q Consensus 234 ~~~g~~~~~~~~~~~~~ 250 (310)
+.+|++..+..+|...+
T Consensus 219 ~~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 219 QLSGQKAKISRVPLFLL 235 (317)
T ss_pred HHhCCCCeEEeCCHHHH
Confidence 99999988888887655
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=235.76 Aligned_cols=227 Identities=32% Similarity=0.493 Sum_probs=183.9
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGH 86 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~~ 86 (310)
|+|+||||.+|+++++.|++.+++|++++|+.+ ......++..+++++.+|+.|.+++.++|+|+|+||++.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~------~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS------SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH------HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc------hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 799999999999999999999999999999842 22345667789999999999999999999999999999994
Q ss_pred h---hhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecccccc
Q 021596 87 A---LLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 87 ~---~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~~~ 163 (310)
. ......++++||++.| |+|||+|+++....... ...|....| ..|..+|+++++.+++|+++|||+|+++++.
T Consensus 75 ~~~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~-~~~p~~~~~-~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~ 151 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESS-GSEPEIPHF-DQKAEIEEYLRESGIPYTIIRPGFFMENLLP 151 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTT-TSTTHHHHH-HHHHHHHHHHHHCTSEBEEEEE-EEHHHHHT
T ss_pred chhhhhhhhhhHHHhhhccc-cceEEEEEecccccccc-cccccchhh-hhhhhhhhhhhhccccceeccccchhhhhhh
Confidence 4 3788899999999999 99999999887765433 333445566 8999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCeEEEecCCCceeEee-ccchHHHHHHHHhcCCccC--CceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 164 NLLQPGAAAPPRDKVVILGDGNPKAVYN-KEDDIATYTIKAVDDPRTL--NKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~~~l~~~~~~--~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
.+..............+.++++....++ +.+|+|+++++++.+|... ++.+++. ++.+|+.|+++.+++.+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~--~~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 152 PFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA--GETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp TTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG--GGEEEHHHHHHHHHHHHTSEE
T ss_pred hhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC--CCCCCHHHHHHHHHHHHCCcc
Confidence 5444222112233577888888777775 9999999999999988654 5666664 468999999999999999999
Q ss_pred eeee
Q 021596 241 EREY 244 (310)
Q Consensus 241 ~~~~ 244 (310)
+|.+
T Consensus 230 ~y~~ 233 (233)
T PF05368_consen 230 KYVQ 233 (233)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8864
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=237.08 Aligned_cols=236 Identities=24% Similarity=0.295 Sum_probs=182.9
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CC
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QV 77 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~ 77 (310)
..+|+|+||||||+||+++++.|+++|++|++++|+.++..............++++++.+|++|++++.++++ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 44789999999999999999999999999999999854321000000000113579999999999999999998 59
Q ss_pred CEEEEcccchh----------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH--
Q 021596 78 DVVISTVGHAL----------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-- 144 (310)
Q Consensus 78 d~Vi~~a~~~~----------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-- 144 (310)
|+||||++... ..++.+++++|++.+ +++||+ |+.+.. .| ...|..+|...|+.++.
T Consensus 138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~--------~p-~~~~~~sK~~~E~~l~~~~ 207 (390)
T PLN02657 138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ--------KP-LLEFQRAKLKFEAELQALD 207 (390)
T ss_pred cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc--------Cc-chHHHHHHHHHHHHHHhcc
Confidence 99999886421 456789999999998 999988 655421 11 34577999999999986
Q ss_pred cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCcee-EeeccchHHHHHHHHhcCCccCCceEEEcCCCCcc
Q 021596 145 EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKA-VYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIY 223 (310)
Q Consensus 145 ~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~ 223 (310)
.+++++++||+.|++++...+ ... ..++.+.++++++..+ ++|+++|+|++++.++.++...+++|++.++++.+
T Consensus 208 ~gl~~tIlRp~~~~~~~~~~~-~~~---~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~ 283 (390)
T PLN02657 208 SDFTYSIVRPTAFFKSLGGQV-EIV---KDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKAL 283 (390)
T ss_pred CCCCEEEEccHHHhcccHHHH-Hhh---ccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCccc
Confidence 899999999999887543221 111 3455566777777643 67999999999999998776678999998766689
Q ss_pred CHHHHHHHHHHHhCCCceeeecCHHHHH
Q 021596 224 SFNDLVSLWERKIGKTLEREYVSEEQLL 251 (310)
Q Consensus 224 s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 251 (310)
|++|+++.+.+.+|+++++..+|...+.
T Consensus 284 S~~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 284 TPLEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred CHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 9999999999999999999999987654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=214.72 Aligned_cols=232 Identities=22% Similarity=0.329 Sum_probs=177.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+||||||+|+||+|.+.+|++.|++|++++.-..+. . +.+.....+++++|+.|.+.+.+.|+ ++|+|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~-~------~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH-K------IALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC-H------HHhhhccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 6899999999999999999999999999998875543 1 22222227899999999999999998 7999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC----CCCCccc---cCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE----FGNDVDR---AHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~----~~~~~~~---~~~~~~~~~~~y~~~K~~~e~ 140 (310)
.|+... +.++.+++++|++.+ +++||||| ||.+... ++.+.. +.++||++|..+|+
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~-p~NPYG~sKlm~E~ 151 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLA-PINPYGRSKLMSEE 151 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCC-CCCcchhHHHHHHH
Confidence 999765 888999999999999 99999954 7765442 222444 47899999999999
Q ss_pred HHHH----cCCCEEEEe-cceeccc--------------cccccCCCCCCCCCCCeEEEec------CCCceeEeeccch
Q 021596 141 AVEA----EGIPYTYVE-SYCFDGY--------------FLPNLLQPGAAAPPRDKVVILG------DGNPKAVYNKEDD 195 (310)
Q Consensus 141 ~l~~----~~~~~~i~r-p~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~D 195 (310)
++++ .+++++++| ++..+-. ++|...+... -+...+.++| +|...+|+||+.|
T Consensus 152 iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~--G~r~~l~ifG~DY~T~DGT~iRDYIHV~D 229 (329)
T COG1087 152 ILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAAL--GKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229 (329)
T ss_pred HHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHh--cCCceeEEeCCCCCCCCCCeeeeeeehhH
Confidence 9975 589999999 4444321 1122211110 1233466665 3456799999999
Q ss_pred HHHHHHHHhcCCccCC--ceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHH
Q 021596 196 IATYTIKAVDDPRTLN--KNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEE 248 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 248 (310)
+|.+.+.+++.=...+ .+||+ |.+.-.|..|+++.++++.|+++++...|+.
T Consensus 230 LA~aH~~Al~~L~~~g~~~~~NL-G~G~G~SV~evi~a~~~vtg~~ip~~~~~RR 283 (329)
T COG1087 230 LADAHVLALKYLKEGGSNNIFNL-GSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR 283 (329)
T ss_pred HHHHHHHHHHHHHhCCceeEEEc-cCCCceeHHHHHHHHHHHhCCcCceeeCCCC
Confidence 9999998885422122 46666 4667899999999999999999998887763
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=214.82 Aligned_cols=231 Identities=21% Similarity=0.216 Sum_probs=178.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~--~~d~ 79 (310)
|++|||||.||||++++++++++.. +|+.++.-.- +.+.+.+..+. .++..++++|+.|.+.+.++++ ++|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY---Agn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY---AGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc---cCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 6899999999999999999999874 3555554422 23333334443 4689999999999999999999 6999
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCccc-----cCCCCCCcchhhHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVDR-----AHGAVEPAKSVYYDVK 135 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~~-----~~~~~~~~~~~y~~~K 135 (310)
|+|.|+-.. +.++.++++|+++.....||++ | +||.-... ++.|..| .++|+.||
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~P-sSPYSASK 156 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNP-SSPYSASK 156 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCC-CCCcchhh
Confidence 999998665 8899999999999872237776 4 47764332 3324444 88999999
Q ss_pred HHHHHHHHH----cCCCEEEEecceecc-cccc-ccCCCC-CCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDG-YFLP-NLLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+....++++ +|++++|.||+.-+| ..++ .++... ...+.+.+++++|+|.+.++|++++|-++++..+++..+
T Consensus 157 AasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~ 236 (340)
T COG1088 157 AASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK 236 (340)
T ss_pred hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc
Confidence 998877754 899999999655444 3222 111111 122678889999999999999999999999999999887
Q ss_pred cCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 209 TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 209 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
.|++||+.|.. ..+-.|+++.+++.+|+..+
T Consensus 237 -~GE~YNIgg~~-E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 237 -IGETYNIGGGN-ERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred -CCceEEeCCCc-cchHHHHHHHHHHHhCcccc
Confidence 48999998665 68999999999999998765
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.1e-31 Score=221.18 Aligned_cols=231 Identities=22% Similarity=0.272 Sum_probs=172.6
Q ss_pred EEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 8 LSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|||||+||+|++|+++|+++| ++|++++|+.+.. . ...+...+. +++.+|++|.+++.++++++|+|||+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~---~---~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK---F---LKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc---c---chhhhcccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence 699999999999999999999 7899999885432 1 122233344 499999999999999999999999998
Q ss_pred cchh--------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCcc----------ccCCCCC-CcchhhHHHHHHH
Q 021596 85 GHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVD----------RAHGAVE-PAKSVYYDVKARI 138 (310)
Q Consensus 85 ~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~----------~~~~~~~-~~~~~y~~~K~~~ 138 (310)
+... +.++++++++|++.+ ++++|+ ||.+.... .+..+.. .....|+.+|+.+
T Consensus 75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A 153 (280)
T PF01073_consen 75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA 153 (280)
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence 7643 889999999999998 999998 54322111 0111111 1466899999999
Q ss_pred HHHHHHc---------CCCEEEEecceeccccccccCCCCCCCC-CCCeEEEecCCCceeEeeccchHHHHHHHHhc---
Q 021596 139 RRAVEAE---------GIPYTYVESYCFDGYFLPNLLQPGAAAP-PRDKVVILGDGNPKAVYNKEDDIATYTIKAVD--- 205 (310)
Q Consensus 139 e~~l~~~---------~~~~~i~rp~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~--- 205 (310)
|+++.+. .+.+++|||+.++|.....+........ .+......+++....+++|++|+|.+.+.+++
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~ 233 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL 233 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence 9998763 2789999999888875433333221112 23345667778888999999999999877653
Q ss_pred C----CccCCceEEEcCCCCccC-HHHHHHHHHHHhCCCcee-eecC
Q 021596 206 D----PRTLNKNLYIQPPGNIYS-FNDLVSLWERKIGKTLER-EYVS 246 (310)
Q Consensus 206 ~----~~~~~~~~~~~~~~~~~s-~~e~~~~~~~~~g~~~~~-~~~~ 246 (310)
+ ....|+.|++... ++++ +.|+...+.+.+|.+.+. ..+|
T Consensus 234 ~~~~~~~~~G~~y~itd~-~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 234 EPGKPERVAGQAYFITDG-EPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred cccccccCCCcEEEEECC-CccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 2 2457888999854 5788 999999999999998665 5554
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=215.74 Aligned_cols=227 Identities=17% Similarity=0.170 Sum_probs=167.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+++|+|||||||||+++++.||++||+|++++|++++ ..+.+++..++. ....++.+|+.|.+++..+++|||.||
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 4899999999999999999999999999999999654 234445666653 348999999999999999999999999
Q ss_pred Ecccchh--------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCc------cc---cCC-CCCC------cchh
Q 021596 82 STVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDV------DR---AHG-AVEP------AKSV 130 (310)
Q Consensus 82 ~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~------~~---~~~-~~~~------~~~~ 130 (310)
|+|.+.. +.++.|++++|++..+|+|+|+ ||..... .. .+. ...+ ....
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~ 163 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW 163 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence 9998754 8899999999999988999998 5432211 00 000 1111 1245
Q ss_pred hHHHHHHHHHHHH----HcCCCEEEEecceeccccccccCCCCCC----CCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPNLLQPGAA----APPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|..+|..+|+..- +.+++.+.+-|+.+.|+.+..-...... .+.+. ..... +....|+|++|+|.+.+.
T Consensus 164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~-~~~~~--n~~~~~VdVrDVA~AHv~ 240 (327)
T KOG1502|consen 164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL-AETYP--NFWLAFVDVRDVALAHVL 240 (327)
T ss_pred HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc-cccCC--CCceeeEeHHHHHHHHHH
Confidence 8889999887664 4689999999999999866542221110 01221 12122 233459999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+++.+.+.|+ |.++ .. ..++.|+++.+.+.+..
T Consensus 241 a~E~~~a~GR-yic~-~~-~~~~~ei~~~l~~~~P~ 273 (327)
T KOG1502|consen 241 ALEKPSAKGR-YICV-GE-VVSIKEIADILRELFPD 273 (327)
T ss_pred HHcCcccCce-EEEe-cC-cccHHHHHHHHHHhCCC
Confidence 9999987655 4444 34 67799999999998764
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=225.20 Aligned_cols=232 Identities=17% Similarity=0.159 Sum_probs=171.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh---hhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH---FKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~---l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+|+|+|||||||||++|++.|+++|++|++++|............... .....++++.+|+.|.+.+..+++++|+|
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V 94 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV 94 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence 689999999999999999999999999999998743221001000000 01135788999999999999999999999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc---cCCCCCCcchhhHHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR---AHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~---~~~~~~~~~~~y~~~K~~~ 138 (310)
||+|+... +.++.+++++|++.+ +++||+ |+ ||..... ++.+.. +.++|+.+|..+
T Consensus 95 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~-p~~~Y~~sK~~~ 172 (348)
T PRK15181 95 LHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGR-PLSPYAVTKYVN 172 (348)
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCC-CCChhhHHHHHH
Confidence 99998532 677899999999998 999988 43 6532211 111222 357899999999
Q ss_pred HHHHHH----cCCCEEEEecceecccccc-c-----cCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 139 RRAVEA----EGIPYTYVESYCFDGYFLP-N-----LLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 139 e~~l~~----~~~~~~i~rp~~~~~~~~~-~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|++++. .+++++++||+.++|.... . +..... ....++.+.++++|.+.++|+|++|+|+++..++..+
T Consensus 173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~ 252 (348)
T PRK15181 173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN 252 (348)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 988753 5899999998888775321 1 000000 1144566778888999999999999999998877543
Q ss_pred c--cCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 208 R--TLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 208 ~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
. ..+++||+++ ++.+|+.|+++.+.+.++.
T Consensus 253 ~~~~~~~~yni~~-g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 253 DLASKNKVYNVAV-GDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred cccCCCCEEEecC-CCcEeHHHHHHHHHHHhCc
Confidence 2 2467888874 4589999999999999874
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=220.39 Aligned_cols=232 Identities=17% Similarity=0.179 Sum_probs=173.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|++.|+|+|||||||||+++++.|+++||+|++++|..... . .. .....+++.+|+.|.+.+..+++++|+|
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~----~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~V 89 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH----M---SE-DMFCHEFHLVDLRVMENCLKVTKGVDHV 89 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc----c---cc-ccccceEEECCCCCHHHHHHHHhCCCEE
Confidence 44578999999999999999999999999999999974211 0 00 0124678899999999999999999999
Q ss_pred EEcccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc-------ccCCC-CCCcchhhH
Q 021596 81 ISTVGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD-------RAHGA-VEPAKSVYY 132 (310)
Q Consensus 81 i~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~-------~~~~~-~~~~~~~y~ 132 (310)
||+|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+ +..+.+.|+
T Consensus 90 ih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg 168 (370)
T PLN02695 90 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 168 (370)
T ss_pred EEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHH
Confidence 99996431 456789999999998 999987 43 553211 01101 122367899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEecceecccccc----------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 133 DVKARIRRAVEA----EGIPYTYVESYCFDGYFLP----------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.+|..+|++++. .+++++++||+.++|..-. .+..... .....+.+++++++.++|+|++|+++
T Consensus 169 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~g~g~~~r~~i~v~D~a~ 246 (370)
T PLN02695 169 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDEFEMWGDGKQTRSFTFIDECVE 246 (370)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHH--cCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence 999999998754 6899999998888875311 1111000 11346778888999999999999999
Q ss_pred HHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 199 YTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 199 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++..++..+ .++.||+.+ ++.+|+.|+++.+.+..|.+.++...|
T Consensus 247 ai~~~~~~~--~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~i~~~~ 291 (370)
T PLN02695 247 GVLRLTKSD--FREPVNIGS-DEMVSMNEMAEIALSFENKKLPIKHIP 291 (370)
T ss_pred HHHHHHhcc--CCCceEecC-CCceeHHHHHHHHHHHhCCCCCceecC
Confidence 999988764 357888875 458999999999999999766554443
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=221.11 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=167.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhh----hcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHF----KNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
+|+|||||||||||++|++.|+++ |++|++++|+.+ +...+... ...+++++.+|+.|.+.+.++++++|
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~-----~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYND-----KIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCch-----hhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 579999999999999999999998 599999998732 22111111 12368999999999999999999999
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCC-----------
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAV----------- 124 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~----------- 124 (310)
+|||+|+... +.++.+++++|++.+ ++||+ |+ ||... .+.. +.
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~-p~~~~~~~~~~~e 165 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDH-PLRQDPAFYVLKE 165 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccc-ccccccccccccc
Confidence 9999997421 456788999998875 67777 43 55321 1111 10
Q ss_pred ----------CCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccc-------------cCCCC-CCCCCCC
Q 021596 125 ----------EPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPN-------------LLQPG-AAAPPRD 176 (310)
Q Consensus 125 ----------~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~-------------~~~~~-~~~~~~~ 176 (310)
..+.+.|+.+|..+|+++.. .+++++++||+.++|..... +.... .....+.
T Consensus 166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (386)
T PLN02427 166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE 245 (386)
T ss_pred cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCC
Confidence 01235799999999999865 58999999998888864211 00000 0013455
Q ss_pred eEEEecCCCceeEeeccchHHHHHHHHhcCCc-cCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 177 KVVILGDGNPKAVYNKEDDIATYTIKAVDDPR-TLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 177 ~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
.+.+++++++.++|+|++|+|++++.+++++. ..+++||++++++.+|+.|+++.+.+.+|.
T Consensus 246 ~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 246 PLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred CeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 67778888888999999999999999998763 356788887543489999999999999985
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-29 Score=216.28 Aligned_cols=230 Identities=19% Similarity=0.278 Sum_probs=169.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC-CHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL-NHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~~~~~~~~~d~Vi 81 (310)
||+|+|||||||||++|++.|+++ |++|++++|+.. +.. ......+++++.+|+. +.+.+.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~-----~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD-----RLG--DLVNHPRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH-----HHH--HhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 579999999999999999999987 699999998632 111 1122356899999997 7788888999999999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCC-----CCCcchhhHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGA-----VEPAKSVYYD 133 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~-----~~~~~~~y~~ 133 (310)
|+++... +.++.+++++|++.+ +++|+ |+ ||.... ++..+ ..++.+.|+.
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~ 151 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC 151 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence 9987531 456789999999886 57776 43 553221 11101 1123568999
Q ss_pred HHHHHHHHHHH----cCCCEEEEecceeccccccccC----------CCCC-CCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 134 VKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLL----------QPGA-AAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 134 ~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+|..+|++++. .+++++++||+.++|....... .... ....+..+.+.+.+++.++|+|++|+++
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~ 231 (347)
T PRK11908 152 SKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGID 231 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHH
Confidence 99999998864 6899999998877775421110 0000 0123455667777888999999999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHHhCCCcee
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 242 (310)
++..+++.+. ..+++||+.+++..+|+.|+++.+.+.+|....+
T Consensus 232 a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~ 277 (347)
T PRK11908 232 ALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY 277 (347)
T ss_pred HHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc
Confidence 9999998753 3578899976545799999999999999965443
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=220.99 Aligned_cols=239 Identities=20% Similarity=0.221 Sum_probs=171.7
Q ss_pred CceEEEE----ccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCch---hhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSI----GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK---SQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
+++|||| |||||||+++++.|+++||+|++++|+.......+ ......+...+++++.+|+.|.+.+. ...+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~ 130 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAG 130 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCC
Confidence 4789999 99999999999999999999999999854310000 00112233457999999987733322 2247
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc-CC---CCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYV 152 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~ 152 (310)
+|+|||+++.. ...+.+++++|++.| +++||+ |+ |+...........+ ..++ .+|..+|+++++.+++++++
T Consensus 131 ~d~Vi~~~~~~-~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~-~~p~-~sK~~~E~~l~~~~l~~~il 206 (378)
T PLN00016 131 FDVVYDNNGKD-LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDA-VKPK-AGHLEVEAYLQKLGVNWTSF 206 (378)
T ss_pred ccEEEeCCCCC-HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCc-CCCc-chHHHHHHHHHHcCCCeEEE
Confidence 99999998754 567899999999999 999998 54 33221110000011 1223 38999999999999999999
Q ss_pred ecceeccccccc-cCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHH
Q 021596 153 ESYCFDGYFLPN-LLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVS 230 (310)
Q Consensus 153 rp~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~ 230 (310)
||+.++|..... +..... ....++.+.+++.+++.++++|++|+|+++..++.++...+++||++++. .+|+.|+++
T Consensus 207 Rp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~-~~s~~el~~ 285 (378)
T PLN00016 207 RPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDR-AVTFDGMAK 285 (378)
T ss_pred eceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCC-ccCHHHHHH
Confidence 999988753211 100000 01334556777888888999999999999999998876567889998654 899999999
Q ss_pred HHHHHhCCCceeeecCHH
Q 021596 231 LWERKIGKTLEREYVSEE 248 (310)
Q Consensus 231 ~~~~~~g~~~~~~~~~~~ 248 (310)
.+.+.+|++.++...+..
T Consensus 286 ~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 286 ACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred HHHHHhCCCCceeecCcc
Confidence 999999998766655543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=216.15 Aligned_cols=230 Identities=19% Similarity=0.198 Sum_probs=165.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
|++|+|||||||||+++++.|+++|++++++.++.... . .......+ ....++++.+|+.|.+++.++++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-G-NLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-c-chhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 57999999999999999999999998866554442211 0 11011111 12357888999999999999998 49999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHc---------CCccEEcc-CC---CCCCcc-----ccCCCCCCc
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEA---------GNVTRFFP-SE---FGNDVD-----RAHGAVEPA 127 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~---------~~v~~~v~-s~---~~~~~~-----~~~~~~~~~ 127 (310)
||+|+... +.++.+++++|++. + ++++|+ |+ |+.... .++.+.. +
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~-p 156 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYA-P 156 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCC-C
Confidence 99998632 66788999999863 3 678877 43 553211 1121333 3
Q ss_pred chhhHHHHHHHHHHHHH----cCCCEEEEecceecccccc-c-cCCCC-CCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLP-N-LLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.+.|+.+|..+|.+++. .+++++++||+.++|.... . +.... .....+..+.+++++++.++|+|++|+++++
T Consensus 157 ~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~ 236 (355)
T PRK10217 157 SSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL 236 (355)
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence 67899999999988753 6899999999888875421 1 10000 0013345577788999999999999999999
Q ss_pred HHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 201 IKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
..+++.+. .++.||++++ +.+|+.|+++.+++.+|+.
T Consensus 237 ~~~~~~~~-~~~~yni~~~-~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 237 YCVATTGK-VGETYNIGGH-NERKNLDVVETICELLEEL 273 (355)
T ss_pred HHHHhcCC-CCCeEEeCCC-CcccHHHHHHHHHHHhccc
Confidence 99987654 4678888755 4899999999999999864
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=218.21 Aligned_cols=230 Identities=17% Similarity=0.289 Sum_probs=165.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|||||||||||++|++.|+++|++|++++|..... +......+...+++++.+|+.+. ++.++|+|||+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~---~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR---KENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc---hhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 47999999999999999999999999999998763321 11111223345788999998765 34689999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCC---CCCCcchhhHHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHG---AVEPAKSVYYDVKAR 137 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~---~~~~~~~~y~~~K~~ 137 (310)
|+... +.++.+++++|++.+ + +||+ |+ |+.... +... .+..+.+.|+.+|..
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~ 268 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT 268 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence 97432 567899999999998 6 6666 43 553211 1100 011125689999999
Q ss_pred HHHHHHH----cCCCEEEEecceecccccc----ccCCCC-CCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFLP----NLLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+|+++.. .+++++++||+.++|.... .+.... .....++.+.+++++++.++|+|++|+|+++..+++.+
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~- 347 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE- 347 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence 9998854 5899999998777765321 110000 01134566778888899999999999999999998754
Q ss_pred cCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 209 TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 209 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
.++.||+++++ .+|+.|+++.+.+.+|.+.++...|
T Consensus 348 -~~g~yNIgs~~-~~sl~Elae~i~~~~g~~~~i~~~p 383 (442)
T PLN02206 348 -HVGPFNLGNPG-EFTMLELAKVVQETIDPNAKIEFRP 383 (442)
T ss_pred -CCceEEEcCCC-ceeHHHHHHHHHHHhCCCCceeeCC
Confidence 35688987654 8999999999999998765554433
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=217.96 Aligned_cols=228 Identities=17% Similarity=0.298 Sum_probs=164.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|+|||||||||++|++.|+++|++|++++|..... ............++++.+|+.+. .+.++|+|||+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~---~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl 191 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR---KENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHL 191 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc---HhHhhhhccCCceEEEECccccc-----cccCCCEEEEC
Confidence 48999999999999999999999999999999864321 11111111234678889998764 35689999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccC----CCCCCcchhhHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAH----GAVEPAKSVYYDVKA 136 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~----~~~~~~~~~y~~~K~ 136 (310)
|+... +.++.+++++|++.+ + ++|+ |+ ||.... +.. .+.. +.+.|+.+|.
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~-p~s~Yg~SK~ 268 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIG-ERSCYDEGKR 268 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCCCCC-CCCchHHHHH
Confidence 97422 667899999999988 6 6665 43 654311 110 0222 3567999999
Q ss_pred HHHHHHHH----cCCCEEEEecceecccccc----ccCC-CCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 137 RIRRAVEA----EGIPYTYVESYCFDGYFLP----NLLQ-PGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~rp~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+|++++. .+++++++||+.++|.... .+.. .......++.+.+++++++.++|+|++|+++++..+++.+
T Consensus 269 ~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~ 348 (436)
T PLN02166 269 TAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE 348 (436)
T ss_pred HHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 99998864 5899999998877775321 1100 0001134566777888889999999999999999998754
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
.+++||++++ +.+|+.|+++.+.+.+|.+.++...
T Consensus 349 --~~giyNIgs~-~~~Si~ela~~I~~~~g~~~~i~~~ 383 (436)
T PLN02166 349 --HVGPFNLGNP-GEFTMLELAEVVKETIDSSATIEFK 383 (436)
T ss_pred --CCceEEeCCC-CcEeHHHHHHHHHHHhCCCCCeeeC
Confidence 3568888754 5899999999999999987655443
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=212.37 Aligned_cols=224 Identities=18% Similarity=0.184 Sum_probs=162.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+|+|+||||+||||+++++.|+++|++|++++|+.+.. +......+.. ..++++.+|+.|.+++.++++++|+||
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP---KNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh---hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 57899999999999999999999999999999984321 1111122221 357889999999999999999999999
Q ss_pred Ecccchh----------hhhHHHHHHHHHHcCCccEEcc-CC----CCCCc-------cccCC-C---CCCcchhhHHHH
Q 021596 82 STVGHAL----------LADQVKIIAAIKEAGNVTRFFP-SE----FGNDV-------DRAHG-A---VEPAKSVYYDVK 135 (310)
Q Consensus 82 ~~a~~~~----------~~~~~~~~~aa~~~~~v~~~v~-s~----~~~~~-------~~~~~-~---~~~~~~~y~~~K 135 (310)
|+|+... +.++.+++++|++.+ ++++|+ |+ |+... ++... + ...+.+.|+.+|
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK 165 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK 165 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence 9998643 667899999999998 999887 43 33211 11100 0 111356799999
Q ss_pred HHHHHHHHH----cCCCEEEEecceeccccccccCCCCC----CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA----AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
..+|+++.. .+++++++||+.++|........... ....+.. ... ++..++|||++|+|++++.+++.+
T Consensus 166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~i~V~Dva~a~~~al~~~ 242 (342)
T PLN02214 166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSA-KTY--ANLTQAYVDVRDVALAHVLVYEAP 242 (342)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc-ccC--CCCCcCeeEHHHHHHHHHHHHhCc
Confidence 999998864 58999999998888864321100000 0011221 122 345679999999999999999876
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
.. ++.||+.+ + ..++.|+++.+.+.++
T Consensus 243 ~~-~g~yn~~~-~-~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 243 SA-SGRYLLAE-S-ARHRGEVVEILAKLFP 269 (342)
T ss_pred cc-CCcEEEec-C-CCCHHHHHHHHHHHCC
Confidence 53 45788764 4 6899999999999986
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=216.93 Aligned_cols=239 Identities=20% Similarity=0.217 Sum_probs=169.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCc------------hhhHhH---hhhcCCcEEEEccCCCHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS------------KSQLLD---HFKNLGVNFVVGDVLNHE 68 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------------~~~~~~---~l~~~~~~~v~~D~~d~~ 68 (310)
+|+||||||+||||++|++.|+++|++|++++|........ ....+. .....+++++.+|+.|.+
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~ 126 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE 126 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence 68999999999999999999999999999987532111000 000011 111246899999999999
Q ss_pred HHHHHhc--CCCEEEEcccchh------------------hhhHHHHHHHHHHcCCcc-EEcc-C---CCCCCcc---cc
Q 021596 69 SLVNAIK--QVDVVISTVGHAL------------------LADQVKIIAAIKEAGNVT-RFFP-S---EFGNDVD---RA 120 (310)
Q Consensus 69 ~~~~~~~--~~d~Vi~~a~~~~------------------~~~~~~~~~aa~~~~~v~-~~v~-s---~~~~~~~---~~ 120 (310)
.+.++++ ++|+|||+|+... +.++.+++++|++.+ ++ +||+ | .||.... +.
T Consensus 127 ~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~E~ 205 (442)
T PLN02572 127 FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIEEG 205 (442)
T ss_pred HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCccc
Confidence 9999998 5899999995421 567889999999988 75 7886 3 3664311 00
Q ss_pred ----------C---CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccc------cCCC---------
Q 021596 121 ----------H---GAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPN------LLQP--------- 168 (310)
Q Consensus 121 ----------~---~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~------~~~~--------- 168 (310)
+ .+.. +.++|+.+|..+|.+++. .+++++++||+.++|..... +...
T Consensus 206 ~i~~~~~~~e~~~~~~~~-P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~ 284 (442)
T PLN02572 206 YITITHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGT 284 (442)
T ss_pred ccccccccccccccCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhh
Confidence 1 0222 357899999999988754 58999999988887753211 0000
Q ss_pred -----CCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC--ceEEEcCCCCccCHHHHHHHHHHH---hCC
Q 021596 169 -----GAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN--KNLYIQPPGNIYSFNDLVSLWERK---IGK 238 (310)
Q Consensus 169 -----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~---~g~ 238 (310)
......++.+.++++|++.++|+|++|+++++..+++.+...+ .+||+. ++ .+|+.|+++.+.+. +|+
T Consensus 285 ~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig-s~-~~si~el~~~i~~~~~~~g~ 362 (442)
T PLN02572 285 ALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF-TE-QFSVNELAKLVTKAGEKLGL 362 (442)
T ss_pred HHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC-CC-ceeHHHHHHHHHHHHHhhCC
Confidence 0001234556778889999999999999999999997653233 467775 34 79999999999999 887
Q ss_pred CceeeecC
Q 021596 239 TLEREYVS 246 (310)
Q Consensus 239 ~~~~~~~~ 246 (310)
+..+...|
T Consensus 363 ~~~~~~~p 370 (442)
T PLN02572 363 DVEVISVP 370 (442)
T ss_pred CCCeeeCC
Confidence 66554443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=205.93 Aligned_cols=207 Identities=20% Similarity=0.213 Sum_probs=150.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+||||||+||||+++++.|+++| +|+++.|... .+.+|+.|.+.+.++++ ++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 589999999999999999999999 7988888621 23689999999999998 5899999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+... +.++.+++++|++.+ + ++|+ |+ |+.. ..+.+ +.. +.+.||.+|..+|
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p~~E~~-~~~-P~~~Yg~sK~~~E 136 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIPWQETD-ATA-PLNVYGETKLAGE 136 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCCcCCCC-CCC-CCCHHHHHHHHHH
Confidence 998653 556889999999998 6 5666 44 4432 22222 333 3678999999999
Q ss_pred HHHHHcCCCEEEEecceeccccccccCCCCCCC-CCCCeEEEecC--CCceeEeeccchHHHHHHHHhcCCccCCceEEE
Q 021596 140 RAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGD--GNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216 (310)
Q Consensus 140 ~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 216 (310)
++++.+..+++++|+++++|.....+....... ..++.+.++++ +.....+...+|++.++..++..+. .+++||+
T Consensus 137 ~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni 215 (299)
T PRK09987 137 KALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHL 215 (299)
T ss_pred HHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEe
Confidence 999988888999999888875322211111100 23455666665 4444445556667777777775543 3468998
Q ss_pred cCCCCccCHHHHHHHHHHHhC
Q 021596 217 QPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 217 ~~~~~~~s~~e~~~~~~~~~g 237 (310)
++++ .+|+.|+++.+.+.++
T Consensus 216 ~~~~-~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 216 VASG-TTTWHDYAALVFEEAR 235 (299)
T ss_pred eCCC-CccHHHHHHHHHHHHH
Confidence 7654 8999999999988654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.9e-28 Score=207.13 Aligned_cols=225 Identities=22% Similarity=0.248 Sum_probs=159.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|||||||||+++++.|+++|++|+++.|+.+.. .+........ ...++++.+|+.|.+++.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR--KKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch--HHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 37999999999999999999999999999999985432 1111111111 2368999999999999999999999999
Q ss_pred Ecccchh--------------hhhHHHHHHHHHHcCCccEEcc-CCCC-----CCcc-c-----cCCCCCC-----cchh
Q 021596 82 STVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEFG-----NDVD-R-----AHGAVEP-----AKSV 130 (310)
Q Consensus 82 ~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~-----~~~~-~-----~~~~~~~-----~~~~ 130 (310)
|+|+... +.++.+++++|++..++++||+ |+.+ .... . ++....| +.+.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 162 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW 162 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccc
Confidence 9998531 5668899999998622899988 4432 1110 0 1101111 2467
Q ss_pred hHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCC---C-CCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPG---A-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|+.+|..+|+.+.+ .+++++++||+.++|.......... . ....+.. .. +...++|+|++|+|++++.
T Consensus 163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~v~v~Dva~a~~~ 238 (322)
T PLN02986 163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN--LF--NNRFYRFVDVRDVALAHIK 238 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC--CC--CCcCcceeEHHHHHHHHHH
Confidence 99999999987753 6899999999998886432110000 0 0011221 12 2455799999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
+++.+.. ++.|++. ++ .+|+.|+++.+.+.++
T Consensus 239 al~~~~~-~~~yni~-~~-~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 239 ALETPSA-NGRYIID-GP-IMSVNDIIDILRELFP 270 (322)
T ss_pred HhcCccc-CCcEEEe-cC-CCCHHHHHHHHHHHCC
Confidence 9988754 3478874 33 7999999999999987
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-28 Score=207.92 Aligned_cols=225 Identities=15% Similarity=0.202 Sum_probs=159.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|||||||||||+++++.|+++|++|++++|+.... .+...+..+. .++++++.+|+.|++.+..+++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP--KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch--hhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 47899999999999999999999999999999984321 1111111111 2467899999999999999999999999
Q ss_pred Ecccchh--------------hhhHHHHHHHHHHc-CCccEEcc-CC-----CCCCcc------ccCCCCCC-----cch
Q 021596 82 STVGHAL--------------LADQVKIIAAIKEA-GNVTRFFP-SE-----FGNDVD------RAHGAVEP-----AKS 129 (310)
Q Consensus 82 ~~a~~~~--------------~~~~~~~~~aa~~~-~~v~~~v~-s~-----~~~~~~------~~~~~~~~-----~~~ 129 (310)
|+|+... +.++.+++++|++. + +++||+ |+ |+.... .++.+..| ..+
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~ 160 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL 160 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence 9997521 56788999999987 6 899887 44 322110 01101112 125
Q ss_pred hhHHHHHHHHHHHH----HcCCCEEEEecceeccccccccCCCC---CC-CCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPNLLQPG---AA-APPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|..+|++++ +.+++++++||+.++|.......... .. ...+.. . .++..++|+|++|+|+++.
T Consensus 161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~Dva~a~~ 236 (322)
T PLN02662 161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--T--FPNASYRWVDVRDVANAHI 236 (322)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--c--CCCCCcCeEEHHHHHHHHH
Confidence 79999999998875 46899999999988886432110000 00 011111 1 1345689999999999999
Q ss_pred HHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 202 KAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
.+++.+.. ++.|++.+ +.+|+.|+++.+.+.++.
T Consensus 237 ~~~~~~~~-~~~~~~~g--~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 237 QAFEIPSA-SGRYCLVE--RVVHYSEVVKILHELYPT 270 (322)
T ss_pred HHhcCcCc-CCcEEEeC--CCCCHHHHHHHHHHHCCC
Confidence 99987653 34678863 479999999999998764
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=203.24 Aligned_cols=203 Identities=17% Similarity=0.188 Sum_probs=157.8
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC--CEEEEc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV--DVVIST 83 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~--d~Vi~~ 83 (310)
+|+|||||||+|+++++.|+++|++|++++|+ .+|+.|.+++.++++++ |+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 58999999999999999999999999999885 47899999999999864 999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHHHHHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
++... ..++.+++++|++.+ . ++|+ |+ |+.. .++.. +.. +.+.|+.+|..+|+
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~E~~-~~~-~~~~Y~~~K~~~E~ 133 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRPYREDD-ATN-PLNVYGQSKLAGEQ 133 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCCCCCCC-CCC-CcchhhHHHHHHHH
Confidence 98532 446889999999887 5 6666 43 4332 11222 333 36789999999999
Q ss_pred HHHHcCCCEEEEecceeccccc-----cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEE
Q 021596 141 AVEAEGIPYTYVESYCFDGYFL-----PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLY 215 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~ 215 (310)
+++..+.+++++||+.++|... ..+.... ..++.+...+ +..+++++++|+|+++..+++.+...+++||
T Consensus 134 ~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~n 208 (287)
T TIGR01214 134 AIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLA---GRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYH 208 (287)
T ss_pred HHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHh---hcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEE
Confidence 9999999999999998887542 1111111 2233444444 4567999999999999999987645678999
Q ss_pred EcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 216 IQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 216 ~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
+++++ .+|+.|+++.+.+.+|++..
T Consensus 209 i~~~~-~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 209 LANSG-QCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred EECCC-CcCHHHHHHHHHHHhCcccc
Confidence 98655 89999999999999998754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=204.50 Aligned_cols=232 Identities=17% Similarity=0.188 Sum_probs=163.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-hh---hcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HF---KNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~l---~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
++||||||+||||+++++.|+++|++|++++|+.+.........+. .. ...+++++.+|++|.+++.++++ ++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999985421011111110 00 02458999999999999999998 479
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCcc---EEcc-CC---CCCCcc---ccCCCCCCcchhhHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVT---RFFP-SE---FGNDVD---RAHGAVEPAKSVYYD 133 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~---~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~ 133 (310)
+|||+|+... ..++.+++++|++.+ ++ +||+ |+ ||.... .++.+.. +.++|+.
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-p~~~Y~~ 158 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFY-PRSPYAA 158 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCC-CCChhHH
Confidence 9999998632 347889999999987 63 6776 43 664321 1221333 3678999
Q ss_pred HHHHHHHHHHH----cCCCEEEEec-ceeccccccccCCCC----CCC-CCCC-eEEEecCCCceeEeeccchHHHHHHH
Q 021596 134 VKARIRRAVEA----EGIPYTYVES-YCFDGYFLPNLLQPG----AAA-PPRD-KVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 134 ~K~~~e~~l~~----~~~~~~i~rp-~~~~~~~~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+|..+|.+++. .+++++..|+ +.+++.....+.... ... ..++ ....++++++.++|+|++|+|+++..
T Consensus 159 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~ 238 (343)
T TIGR01472 159 AKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWL 238 (343)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHH
Confidence 99999998854 4788887774 333332111111000 000 1222 23456888899999999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
+++.+. ++.||+++ ++.+|+.|+++.+.+.+|++..
T Consensus 239 ~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~~~ 274 (343)
T TIGR01472 239 MLQQDK--PDDYVIAT-GETHSVREFVEVSFEYIGKTLN 274 (343)
T ss_pred HHhcCC--CccEEecC-CCceeHHHHHHHHHHHcCCCcc
Confidence 997653 36788875 5589999999999999997653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=222.15 Aligned_cols=227 Identities=22% Similarity=0.305 Sum_probs=166.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHH-HHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHES-LVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~-~~~~~~~~d~Vi 81 (310)
+|+|||||||||||++|++.|+++ ||+|++++|..+.. . ......+++++.+|++|.+. +.++++++|+||
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~----~---~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi 387 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI----S---RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL 387 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh----h---hhcCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence 689999999999999999999986 69999999974321 0 11223478999999998655 677889999999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCC-----CCCCcchhhHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHG-----AVEPAKSVYYD 133 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~-----~~~~~~~~y~~ 133 (310)
|+|+... +.++.+++++|++.+ ++||+ |+ ||... ++... +..++.+.|+.
T Consensus 388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~ 465 (660)
T PRK08125 388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSV 465 (660)
T ss_pred ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHH
Confidence 9997432 567889999999986 57776 43 55321 11110 11112457999
Q ss_pred HHHHHHHHHHH----cCCCEEEEecceeccccccccC-----------CCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 134 VKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLL-----------QPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 134 ~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+|..+|++++. .+++++++||+.++|.....+. ........++.+.+++++++.++|+|++|+++
T Consensus 466 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~ 545 (660)
T PRK08125 466 SKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIE 545 (660)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHH
Confidence 99999999854 5899999999888775321110 00001133556677788899999999999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
++..+++.+. ..+++||+.++.+.+|+.|+++.+.+.+|.+
T Consensus 546 a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 546 ALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 9999997642 2467788875433799999999999999964
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=203.50 Aligned_cols=229 Identities=19% Similarity=0.215 Sum_probs=166.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+||||+|++|+++++.|+++|++|++++|+.+.. ..+...+++++.+|+.|.+++.++++++|+|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a 72 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA 72 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc--------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence 5899999999999999999999999999999984322 12224478999999999999999999999999999
Q ss_pred cchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc-----cccCCCCCC--cchhhHHHHHHHHH
Q 021596 85 GHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV-----DRAHGAVEP--AKSVYYDVKARIRR 140 (310)
Q Consensus 85 ~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~-----~~~~~~~~~--~~~~y~~~K~~~e~ 140 (310)
+... +.++.+++++|++.+ ++++|+ |+ |+... ++.. +..+ ....|+.+|..+|+
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~-~~~~~~~~~~Y~~sK~~~e~ 150 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETT-PSSLDDMIGHYKRSKFLAEQ 150 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccC-CCCcccccChHHHHHHHHHH
Confidence 7531 566789999999988 899887 43 44211 1111 2222 13579999999999
Q ss_pred HHHH----cCCCEEEEecceeccccccccCCC--CC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 141 AVEA----EGIPYTYVESYCFDGYFLPNLLQP--GA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 141 ~l~~----~~~~~~i~rp~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
+++. .+++++++||+.++|......... .. ....++ ..... +...+++|++|+|+++..+++.+. .+..
T Consensus 151 ~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~ 226 (328)
T TIGR03466 151 AALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGK-MPAYV--DTGLNLVHVDDVAEGHLLALERGR-IGER 226 (328)
T ss_pred HHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCC-Cceee--CCCcceEEHHHHHHHHHHHHhCCC-CCce
Confidence 8865 589999999988887542211000 00 001111 12221 234689999999999999997754 4555
Q ss_pred EEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHH
Q 021596 214 LYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQ 249 (310)
Q Consensus 214 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 249 (310)
|++ + ++.+|+.|+++.+.+.+|++.....+|...
T Consensus 227 ~~~-~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 260 (328)
T TIGR03466 227 YIL-G-GENLTLKQILDKLAEITGRPAPRVKLPRWL 260 (328)
T ss_pred EEe-c-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence 655 4 458999999999999999887766677543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-26 Score=201.63 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=167.6
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh---hcCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|+. +++|+|||||||+|+++++.|+++|++|++++|..... .......... ...+++++.+|+.|.+++.++++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS-EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch-HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 554 47999999999999999999999999999998764321 1111111111 12468899999999999999887
Q ss_pred -CCCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~ 132 (310)
++|+|||+++... +.++.+++++|++.+ +++||+ |+ |+.... .++.+..| .+.|+
T Consensus 80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~-~~~Y~ 157 (352)
T PLN02240 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSA-TNPYG 157 (352)
T ss_pred CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCC-CCHHH
Confidence 6899999998532 456789999999988 888887 44 443211 12213333 57899
Q ss_pred HHHHHHHHHHHH-----cCCCEEEEecceecccccc------------ccCCCCCCCCCC--CeEEEec------CCCce
Q 021596 133 DVKARIRRAVEA-----EGIPYTYVESYCFDGYFLP------------NLLQPGAAAPPR--DKVVILG------DGNPK 187 (310)
Q Consensus 133 ~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~------~~~~~ 187 (310)
.+|..+|++++. .+++++++|+..+++...+ .+.........+ ..+.+++ +|.+.
T Consensus 158 ~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 237 (352)
T PLN02240 158 RTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGV 237 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEE
Confidence 999999999863 3678899997655542110 000000000111 1234443 57788
Q ss_pred eEeeccchHHHHHHHHhcC----CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 188 AVYNKEDDIATYTIKAVDD----PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~----~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++|+|++|+|++++.+++. +...+++||+++ ++.+|+.|+++.+.+.+|++.++...+
T Consensus 238 ~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 299 (352)
T PLN02240 238 RDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLKLAP 299 (352)
T ss_pred EeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCceeCC
Confidence 9999999999998888753 233457888875 458999999999999999876665543
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=204.54 Aligned_cols=229 Identities=20% Similarity=0.208 Sum_probs=163.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
|+|+|||||||||+++++.|+++|++ |+++.|..... .......+. ...++++.+|+.|.+++.++++ ++|+|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG---NLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAV 77 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc---hHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence 58999999999999999999999976 55455432111 111111221 2357889999999999999997 48999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHc--------CCccEEcc-CC---CCCCc-------------ccc
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEA--------GNVTRFFP-SE---FGNDV-------------DRA 120 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~--------~~v~~~v~-s~---~~~~~-------------~~~ 120 (310)
||+|+... +.++.+++++|++. ++++++|+ |+ |+... -.+
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 99998642 66789999999874 12667876 43 55311 011
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccc-c-ccCCCCC-CCCCCCeEEEecCCCceeEeecc
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFL-P-NLLQPGA-AAPPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~ 193 (310)
+.+.. +.+.|+.+|..+|++++. .+++++++|++.++|... + .+..... ....++.+.+++++++.++|+|+
T Consensus 158 ~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 158 TTAYA-PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred cCCCC-CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 11223 367899999999988854 589999999877776532 1 1111000 01234456778888999999999
Q ss_pred chHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 194 DDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+|+++++..+++.+. .++.||++++ +..|..|+++.+++.+|+.
T Consensus 237 ~D~a~a~~~~l~~~~-~~~~yni~~~-~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 237 EDHARALYKVVTEGK-AGETYNIGGH-NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHHHHhcCC-CCceEEeCCC-CcCcHHHHHHHHHHHhccc
Confidence 999999999887643 4678888754 4899999999999999864
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=199.42 Aligned_cols=238 Identities=20% Similarity=0.297 Sum_probs=166.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++|++|+++.|..... ....+.+..+....++++.+|+.|.+++.++++ ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch-HhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 5899999999999999999999999999988753321 111111122223457889999999999999887 6999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+... ..++.+++++|++.+ ++++|+ |+ |+.. .++.. +...+...|+.+|..+|
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~-~~~~p~~~Y~~sK~~~E 157 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESF-PTGTPQSPYGKSKLMVE 157 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCcccccc-CCCCCCChhHHHHHHHH
Confidence 997532 346789999999998 899887 43 4432 11222 32123678999999999
Q ss_pred HHHHH-----cCCCEEEEecceecccccc------------ccCCCCCCCCCC--CeEEEec------CCCceeEeeccc
Q 021596 140 RAVEA-----EGIPYTYVESYCFDGYFLP------------NLLQPGAAAPPR--DKVVILG------DGNPKAVYNKED 194 (310)
Q Consensus 140 ~~l~~-----~~~~~~i~rp~~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~------~~~~~~~~i~~~ 194 (310)
++++. .+++++++|++.+++..-. .+.........+ ..+.+++ ++.+.++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (338)
T PRK10675 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_pred HHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH
Confidence 98864 3688999997665543110 000000000111 1233333 567789999999
Q ss_pred hHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 195 DIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 195 D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
|+|++++.+++.. ...+++||++++ +.+|+.|+++.+.+.+|++.++...|
T Consensus 238 D~a~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T PRK10675 238 DLADGHVAAMEKLANKPGVHIYNLGAG-VGSSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_pred HHHHHHHHHHHhhhccCCCceEEecCC-CceeHHHHHHHHHHHhCCCCCeeeCC
Confidence 9999999988752 223578888754 58999999999999999887665544
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=201.86 Aligned_cols=228 Identities=19% Similarity=0.233 Sum_probs=164.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcC--CCEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQ--VDVV 80 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~--~d~V 80 (310)
+|+||||||++|+++++.|+++| ++|+++.|..... +.+....+ ...+++++.+|+.|++++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAG---NLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcch---hhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 58999999999999999999987 6888887743211 11111122 224688999999999999999986 9999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~~~~~~~~y~~~K~~ 137 (310)
||+++... ..++.+++++|++.+.-.++|+ |+ ||.... .+..+.. +...|+.+|..
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~-~~~~Y~~sK~~ 156 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLA-PSSPYSASKAA 156 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCC-CCCchHHHHHH
Confidence 99998532 4457889999998751226776 44 443211 1121222 35689999999
Q ss_pred HHHHHHH----cCCCEEEEecceecccccc--ccCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFLP--NLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 210 (310)
+|.+++. .+++++++||+.+++.... .+....+ ....++.+.++++++..++|+|++|+|+++..++++.. .
T Consensus 157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~ 235 (317)
T TIGR01181 157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-V 235 (317)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-C
Confidence 9988763 5899999999888775321 1110000 01334456777888889999999999999999997643 5
Q ss_pred CceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 211 NKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 211 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+++||++++. .+|+.|+++.+.+.+|.+
T Consensus 236 ~~~~~~~~~~-~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 236 GETYNIGGGN-ERTNLEVVETILELLGKD 263 (317)
T ss_pred CceEEeCCCC-ceeHHHHHHHHHHHhCCC
Confidence 6789997654 899999999999999975
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-27 Score=204.29 Aligned_cols=231 Identities=17% Similarity=0.144 Sum_probs=163.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--------cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
+|+|+||||+||||+++++.|+++|++|++++|+.+ +...+..+. ..+++++.+|++|.+++.++++
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~-----~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE-----DKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 589999999999999999999999999999998732 222222221 1257889999999999999999
Q ss_pred CCCEEEEcccchh---------------hhhHHHHHHHHHHc-CCccEEcc-CC-----CCC--Ccc-----ccCC----
Q 021596 76 QVDVVISTVGHAL---------------LADQVKIIAAIKEA-GNVTRFFP-SE-----FGN--DVD-----RAHG---- 122 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~-~~v~~~v~-s~-----~~~--~~~-----~~~~---- 122 (310)
++|+|||+++... +.++.+++++|++. + ++++|+ |+ |+. ... .++.
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~ 206 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDE 206 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCCh
Confidence 9999999987531 55688999999986 6 999887 44 321 110 0110
Q ss_pred -CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCC-CCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 123 -AVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQ-PGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 123 -~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
...++.+.|+.+|..+|++++. .+++++++||+.++|........ .......+ ...+++++ .++|+|++|+
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g-~~~~~g~g--~~~~v~V~Dv 283 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKG-AQEMLADG--LLATADVERL 283 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcC-CCccCCCC--CcCeEEHHHH
Confidence 0111245799999999998853 58999999999888864321100 00000222 23444444 3579999999
Q ss_pred HHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 197 ATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 197 a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
+++++.+++.+ ...++.| +++ ++.+++.|+++.+.+.+|.+......
T Consensus 284 a~A~~~al~~~~~~~~~~~y-i~~-g~~~s~~e~~~~i~~~~g~~~~~~~~ 332 (367)
T PLN02686 284 AEAHVCVYEAMGNKTAFGRY-ICF-DHVVSREDEAEELARQIGLPINKIAG 332 (367)
T ss_pred HHHHHHHHhccCCCCCCCcE-EEe-CCCccHHHHHHHHHHHcCCCCCcCCC
Confidence 99999999742 2244555 654 45899999999999999987554433
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-27 Score=219.39 Aligned_cols=231 Identities=18% Similarity=0.219 Sum_probs=170.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHh-hhcCCcEEEEccCCCHHHHHHHh--cCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDH-FKNLGVNFVVGDVLNHESLVNAI--KQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~-l~~~~~~~v~~D~~d~~~~~~~~--~~~d 78 (310)
+|+|||||||||||+++++.|+++ +++|++++|..... ....+.. ....+++++.+|+.|.+.+..++ .++|
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~---~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 82 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS---NLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID 82 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc---hhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence 689999999999999999999998 57898888753111 1111111 11347899999999999888776 4899
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc------ccCCCCCCcchhhHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD------RAHGAVEPAKSVYYD 133 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~------~~~~~~~~~~~~y~~ 133 (310)
+|||+|+... +.++.+++++|++.+.+++||+ |+ ||.... .++.+.. +.+.|+.
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~-p~~~Y~~ 161 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLL-PTNPYSA 161 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCC-CCCCcHH
Confidence 9999998643 4567899999999866889988 43 554321 1111222 3578999
Q ss_pred HHHHHHHHHHH----cCCCEEEEecceeccccc-c-ccCCCC-CCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA----EGIPYTYVESYCFDGYFL-P-NLLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|..+|++++. .+++++++||+.++|... + .+.... .....++.+.+++++++.++|+|++|+|+++..+++.
T Consensus 162 sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~ 241 (668)
T PLN02260 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241 (668)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence 99999998864 589999999888777532 1 111000 0113455677888889999999999999999998876
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+. .+++||+.++ +.+|+.|+++.+.+.+|.+.
T Consensus 242 ~~-~~~vyni~~~-~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 242 GE-VGHVYNIGTK-KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred CC-CCCEEEECCC-CeeEHHHHHHHHHHHhCCCC
Confidence 53 4678888755 48999999999999999753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=200.41 Aligned_cols=231 Identities=12% Similarity=0.130 Sum_probs=162.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-h--hcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l--~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
+|+||||||+||||+++++.|+++|++|+++.|+.+.....+.+.+.. . ...+++++.+|+.|.+++.++++ ++|
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 579999999999999999999999999999999754211111111100 0 12357899999999999999998 479
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCcc-----EEcc-CC---CCCCcc--ccCCCCCCcchhhH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVT-----RFFP-SE---FGNDVD--RAHGAVEPAKSVYY 132 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~-----~~v~-s~---~~~~~~--~~~~~~~~~~~~y~ 132 (310)
+|||+|+... +.++.+++++|++.+ ++ +||+ |+ ||.... .++.+..| .+.|+
T Consensus 86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p-~~~Y~ 163 (340)
T PLN02653 86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHP-RSPYA 163 (340)
T ss_pred EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCC-CChhH
Confidence 9999998632 456889999999887 64 7776 43 664321 12213333 67899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEec-ceeccccccccCCCCCC----C-CCCCeE-EEecCCCceeEeeccchHHHHHH
Q 021596 133 DVKARIRRAVEA----EGIPYTYVES-YCFDGYFLPNLLQPGAA----A-PPRDKV-VILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~~~~~i~rp-~~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.+|..+|++++. .+++++..|+ +.+++.....+....+. . ..+... ...+++++.++|+|++|+|++++
T Consensus 164 ~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~ 243 (340)
T PLN02653 164 VAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMW 243 (340)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHH
Confidence 999999998854 4677666663 44443221111110000 0 123333 34588899999999999999999
Q ss_pred HHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 202 KAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
.+++.+. ++.||+.+ ++.+|+.|+++.+.+.+|.+
T Consensus 244 ~~~~~~~--~~~yni~~-g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 244 LMLQQEK--PDDYVVAT-EESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHHhcCC--CCcEEecC-CCceeHHHHHHHHHHHcCCC
Confidence 9998653 46788874 55899999999999999964
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=190.80 Aligned_cols=208 Identities=16% Similarity=0.170 Sum_probs=165.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|||||++|++|..|++.|. .+++|++++|. ..|++|++.+.++++ ++|+|||
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~-----------------------~~Ditd~~~v~~~i~~~~PDvVIn 56 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRA-----------------------ELDITDPDAVLEVIRETRPDVVIN 56 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc-----------------------cccccChHHHHHHHHhhCCCEEEE
Confidence 459999999999999999998 66899999997 389999999999998 6899999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC---CC----CCccccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE---FG----NDVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~---~~----~~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|+++. ..+..++.++|++.| .+.+..|+ |. .++.+.+ +.. +.+.||.+|...|+
T Consensus 57 ~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D-~~~-P~nvYG~sKl~GE~ 133 (281)
T COG1091 57 AAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPYKETD-TPN-PLNVYGRSKLAGEE 133 (281)
T ss_pred CccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCCCCCC-CCC-ChhhhhHHHHHHHH
Confidence 999876 667889999999999 65555464 21 1233333 444 48899999999999
Q ss_pred HHHHcCCCEEEEecceeccccccccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCC
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
.+++++-+.+|+|.+++++..-.++...++.. .+++.+.++. |+..++++..|+|+++..++.... .+++||+.+.
T Consensus 134 ~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~-~~~~yH~~~~ 210 (281)
T COG1091 134 AVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEK-EGGVYHLVNS 210 (281)
T ss_pred HHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhccc-cCcEEEEeCC
Confidence 99999999999999999886544444333221 3344555554 788899999999999999997664 3449999988
Q ss_pred CCccCHHHHHHHHHHHhCCCceee
Q 021596 220 GNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 220 ~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+ ..|+.|+++.+.+..+.+....
T Consensus 211 g-~~Swydfa~~I~~~~~~~~~v~ 233 (281)
T COG1091 211 G-ECSWYEFAKAIFEEAGVDGEVI 233 (281)
T ss_pred C-cccHHHHHHHHHHHhCCCcccc
Confidence 7 6999999999999999776433
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=205.61 Aligned_cols=253 Identities=18% Similarity=0.175 Sum_probs=165.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
||||||||+|++|+++++.|.++|++|+++.|+ ..|+.|.+++.+.++ ++|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 799999999999999999999999999999775 578999999999988 6999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC---CCC----CccccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE---FGN----DVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~----~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
||+... +..+.++.++|.+.| ++.+.+|+ |+. +..+.+ +.. +.+.||++|.++|+
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E~d-~~~-P~~~YG~~K~~~E~ 134 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTEDD-PPN-PLNVYGRSKLEGEQ 134 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS------SSHHHHHHHHHHH
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCcccccccCC-CCC-CCCHHHHHHHHHHH
Confidence 998754 677889999999998 65544454 432 233333 344 47899999999999
Q ss_pred HHHHcCCCEEEEecceeccccccccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc---cCCceEEE
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR---TLNKNLYI 216 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~---~~~~~~~~ 216 (310)
.+++..-+++|+|++++++..-.++....... ..++.+.+.. +..+++++++|+|+++..++++.. ...++||+
T Consensus 135 ~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~ 212 (286)
T PF04321_consen 135 AVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHL 212 (286)
T ss_dssp HHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE-
T ss_pred HHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEE
Confidence 99986669999999988876322222211111 2345555554 778899999999999999997653 24589999
Q ss_pred cCCCCccCHHHHHHHHHHHhCCCc-eeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCC
Q 021596 217 QPPGNIYSFNDLVSLWERKIGKTL-EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFP 295 (310)
Q Consensus 217 ~~~~~~~s~~e~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p 295 (310)
++++ .+|..|++..+.+.+|.+. .+..++..++... ...| .+..++. .++...+
T Consensus 213 ~~~~-~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~---~~rp-----------------~~~~L~~---~kl~~~~- 267 (286)
T PF04321_consen 213 SGPE-RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRA---APRP-----------------RNTSLDC---RKLKNLL- 267 (286)
T ss_dssp --BS--EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTS---SGS------------------SBE-B-----HHHHHCT-
T ss_pred ecCc-ccCHHHHHHHHHHHhCCCCceEEecccccCCCC---CCCC-----------------CcccccH---HHHHHcc-
Confidence 9776 8999999999999999876 5566655432110 0111 1122222 3455555
Q ss_pred CCcccCHHHHHHhhC
Q 021596 296 DVKYTTVDEYLNQFV 310 (310)
Q Consensus 296 ~~~~~~~~e~l~~~~ 310 (310)
++++.+++|.|++++
T Consensus 268 g~~~~~~~~~l~~~~ 282 (286)
T PF04321_consen 268 GIKPPPWREGLEELV 282 (286)
T ss_dssp TS---BHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHH
Confidence 889999999998763
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=199.22 Aligned_cols=230 Identities=17% Similarity=0.197 Sum_probs=157.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+++|+||||+||||+++++.|+++|++|+++.|+.... . .......+.. ..++++.+|++|.+++.++++++|+|||
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ-K-KIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH-H-HHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 57999999999999999999999999999999985321 0 1100111211 2588999999999999999999999999
Q ss_pred cccchh--------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc--------cccCC-------CCCCcch
Q 021596 83 TVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV--------DRAHG-------AVEPAKS 129 (310)
Q Consensus 83 ~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~--------~~~~~-------~~~~~~~ 129 (310)
+|+... +.++.+++++|++.+.++++|+ |+ |+... .+... ...++.+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~ 166 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW 166 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence 998432 5567789999988633889887 43 44211 11000 0123466
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCC----CCCCCCeEEEec-CC----CceeEeeccchH
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA----AAPPRDKVVILG-DG----NPKAVYNKEDDI 196 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~----~~~~~~i~~~D~ 196 (310)
+|+.+|..+|++++. .+++++++||+.++|+.......... ....+..+.+.+ .+ +..++|+|++|+
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~ 246 (338)
T PLN00198 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDV 246 (338)
T ss_pred hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHH
Confidence 799999999987764 58999999988888764221110000 001222222222 11 123699999999
Q ss_pred HHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+++++.+++.+.. ++.| ++++ +..|+.|+++.+.+.++.
T Consensus 247 a~a~~~~~~~~~~-~~~~-~~~~-~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 247 CRAHIFLAEKESA-SGRY-ICCA-ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHHhhCcCc-CCcE-EEec-CCCCHHHHHHHHHHHCCC
Confidence 9999999987543 3455 4433 478999999999998763
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-26 Score=198.92 Aligned_cols=224 Identities=17% Similarity=0.208 Sum_probs=156.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hc----CCcEEEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KN----LGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~----~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
.++|||||||||||+++++.|+++|++|++++|+.... .....+ .. ..++++.+|+.|.+.+.++++++|
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV-----KKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh-----HHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence 68999999999999999999999999999999984322 111111 11 247889999999999999999999
Q ss_pred EEEEcccchh--------------hhhHHHHHHHHHHcCCccEEcc-CCC---CCCc------cccCC-------CCCCc
Q 021596 79 VVISTVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEF---GNDV------DRAHG-------AVEPA 127 (310)
Q Consensus 79 ~Vi~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~---~~~~------~~~~~-------~~~~~ 127 (310)
+|||+|+... +.++.+++++|++.+.+++||+ |+. +... ++... +..++
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT 159 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence 9999997532 4578899999998764688887 543 2110 11100 00012
Q ss_pred chhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCCC----CCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGAA----APPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.++|+.+|..+|++++. ++++++++||+.++|............ ...+.. ...+. ...++|+|++|+|++
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~r~~v~V~Dva~a 237 (351)
T PLN02650 160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYSI-IKQGQFVHLDDLCNA 237 (351)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccCc-CCCcceeeHHHHHHH
Confidence 35799999999987753 589999999998887643211111000 011111 11111 224699999999999
Q ss_pred HHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 200 TIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 200 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
+..+++.+.. ++.| ++++ ..+|+.|+++.+.+.++
T Consensus 238 ~~~~l~~~~~-~~~~-i~~~-~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 238 HIFLFEHPAA-EGRY-ICSS-HDATIHDLAKMLREKYP 272 (351)
T ss_pred HHHHhcCcCc-CceE-EecC-CCcCHHHHHHHHHHhCc
Confidence 9999987653 3456 5544 47999999999999876
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=193.86 Aligned_cols=224 Identities=25% Similarity=0.334 Sum_probs=166.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC-CEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV-DVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~-d~Vi~~ 83 (310)
|+|||||||||||++|++.|+++||+|++++|...+.. ... .++.++.+|+.|.+...++.+++ |+|||+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~ 71 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD--------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHL 71 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc--------ccc-cccceeeecccchHHHHHHHhcCCCEEEEc
Confidence 45999999999999999999999999999999854431 111 57889999999998888888888 999999
Q ss_pred ccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC-----ccccCCCCCCcchhhHHHHHHH
Q 021596 84 VGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND-----VDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 84 a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~-----~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
++... +.++.+++++|++.+ ++++|+ |+ ++.. ..+...+..| .++|+.+|..+
T Consensus 72 aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p-~~~Yg~sK~~~ 149 (314)
T COG0451 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRP-LNPYGVSKLAA 149 (314)
T ss_pred cccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCC-CCHHHHHHHHH
Confidence 97653 556889999999987 999988 43 2221 1111013334 33799999999
Q ss_pred HHHHHHc----CCCEEEEecceeccccc-cccCCCCCC-----CCCCCe-EEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 139 RRAVEAE----GIPYTYVESYCFDGYFL-PNLLQPGAA-----APPRDK-VVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 139 e~~l~~~----~~~~~i~rp~~~~~~~~-~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|+.++.+ +++++++||+.++|... +.+...... ...+.. ....+++...+++++++|+++++..+++++
T Consensus 150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 229 (314)
T COG0451 150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP 229 (314)
T ss_pred HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCC
Confidence 9999763 59999999877766432 221100000 122333 456667777889999999999999999987
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
... .||+.++...++..|+++.+.+.+|.+..
T Consensus 230 ~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 230 DGG--VFNIGSGTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred CCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence 533 77776432379999999999999998866
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=211.27 Aligned_cols=240 Identities=15% Similarity=0.165 Sum_probs=170.4
Q ss_pred ceEEEEccCcchhHHHHHHHH--hCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCH------HHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASV--KAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNH------ESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~--~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~------~~~~~~~~ 75 (310)
|+|||||||||||+++++.|+ +.|++|++++|+.+. .+... ...+...+++++.+|+.|+ +.+.++ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL---SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH---HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 589999999999999999999 578999999996321 11111 1111125689999999984 456665 8
Q ss_pred CCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCC-CCCCcchhhHHHH
Q 021596 76 QVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHG-AVEPAKSVYYDVK 135 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~-~~~~~~~~y~~~K 135 (310)
++|+|||+|+... +.++.+++++|++.+ +++||+ |+ ||.... +... ...+..+.|+.+|
T Consensus 77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK 155 (657)
T PRK07201 77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTK 155 (657)
T ss_pred CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHH
Confidence 9999999998542 677899999999998 899888 43 432211 1110 0112246799999
Q ss_pred HHHHHHHHH-cCCCEEEEecceeccccccccCCC---------CCCCC--CCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 136 ARIRRAVEA-EGIPYTYVESYCFDGYFLPNLLQP---------GAAAP--PRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 136 ~~~e~~l~~-~~~~~~i~rp~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
+.+|+++++ .+++++++||+.++|......... ..... ........+.+....++++++|+++++..+
T Consensus 156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~ 235 (657)
T PRK07201 156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL 235 (657)
T ss_pred HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence 999999984 689999999999887432110000 00000 111223444555678999999999999999
Q ss_pred hcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc---eeeecCHHHH
Q 021596 204 VDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL---EREYVSEEQL 250 (310)
Q Consensus 204 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~---~~~~~~~~~~ 250 (310)
+..+...+++||+++++ .+|+.|+++.+.+.+|.+. ....+|...+
T Consensus 236 ~~~~~~~g~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~ 284 (657)
T PRK07201 236 MHKDGRDGQTFHLTDPK-PQRVGDIYNAFARAAGAPPDARLFGFLPGFVA 284 (657)
T ss_pred hcCcCCCCCEEEeCCCC-CCcHHHHHHHHHHHhCCCccccccccCChHHH
Confidence 88666567899998654 8999999999999999887 5666776543
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=195.61 Aligned_cols=228 Identities=17% Similarity=0.185 Sum_probs=163.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
.|+|+||||+||||+++++.|+++|++|++++|+.... . .....+. ...++++.+|+.|.+++.++++ ++|+|
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS-P---NLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc-h---hHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 48999999999999999999999999999999985432 1 1111121 2357789999999999999998 47999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~ 137 (310)
||+++... +.++.+++++|++.+.++++|+ |+ |+... ..++.+.. +.+.|+.+|..
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~-p~~~Y~~sK~~ 158 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG-GHDPYSSSKAC 158 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCC-CCCcchhHHHH
Confidence 99998532 5568899999987654678887 43 54321 11111222 36789999999
Q ss_pred HHHHHHHc-----------CCCEEEEecceecccccc---ccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 138 IRRAVEAE-----------GIPYTYVESYCFDGYFLP---NLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 138 ~e~~l~~~-----------~~~~~i~rp~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+|.+++.. +++++++||+.++|.... .+....... ..+..+ .++++++.++|+|++|++++++.
T Consensus 159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHH
Confidence 99888642 799999999888875311 111111111 233344 45668889999999999999998
Q ss_pred HhcCC----ccCCceEEEcCC-CCccCHHHHHHHHHHHhC
Q 021596 203 AVDDP----RTLNKNLYIQPP-GNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 203 ~l~~~----~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g 237 (310)
+++.. ...++.||+.+. ++.++..|+++.+.+.++
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 77532 123578999743 368999999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=192.79 Aligned_cols=217 Identities=19% Similarity=0.255 Sum_probs=160.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|-+.|+|+||||+|+||+++++.|+++| ++|++++|+.... ......+...+++++.+|+.|.+++.++++++|
T Consensus 1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~----~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD 76 (324)
T TIGR03589 1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ----WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVD 76 (324)
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH----HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCC
Confidence 3346899999999999999999999986 7899998873211 111122223468899999999999999999999
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
+|||+|+... +.++.+++++|++.+ +++||+ |+.. +..| .++|+.+|+.+|+++
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~--------~~~p-~~~Y~~sK~~~E~l~ 146 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK--------AANP-INLYGATKLASDKLF 146 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC--------CCCC-CCHHHHHHHHHHHHH
Confidence 9999998632 457889999999988 889888 5432 2222 467999999999987
Q ss_pred HH-------cCCCEEEEecceecccc---ccccCCCCCCCCCCC-eEEEecCCCceeEeeccchHHHHHHHHhcCCccCC
Q 021596 143 EA-------EGIPYTYVESYCFDGYF---LPNLLQPGAAAPPRD-KVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN 211 (310)
Q Consensus 143 ~~-------~~~~~~i~rp~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 211 (310)
+. .|++++++||+.++|.. ++.+.... ..+. .+++ ++++..++|++++|+++++..+++... .+
T Consensus 147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~---~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~ 221 (324)
T TIGR03589 147 VAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLK---EEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GG 221 (324)
T ss_pred HHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHH---HhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CC
Confidence 53 57999999999998742 22222110 1222 2343 356778899999999999999997643 34
Q ss_pred ceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 212 KNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 212 ~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+.| + +.+..++..|+++.+.+....
T Consensus 222 ~~~-~-~~~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 222 EIF-V-PKIPSMKITDLAEAMAPECPH 246 (324)
T ss_pred CEE-c-cCCCcEEHHHHHHHHHhhCCe
Confidence 544 4 345579999999999997643
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=187.62 Aligned_cols=201 Identities=27% Similarity=0.400 Sum_probs=155.1
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEEEcc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVISTV 84 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi~~a 84 (310)
|||||||||+|++++++|+++|+.|+.++|+.... .... ...+++++.+|+.|.+.+.+++++ +|+|||++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~--~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE-----SFEE--KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG-----HHHH--HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccc-----cccc--ccceEEEEEeeccccccccccccccCceEEEEee
Confidence 79999999999999999999999999999985432 1111 123899999999999999999995 59999999
Q ss_pred cchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCccc---cCCCCCCcchhhHHHHHHHHHHH
Q 021596 85 GHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVDR---AHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 85 ~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~~---~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
+... +..+.+++++|++.+ ++++|+ | .|+..... ++.+. .+.++|+.+|...|+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~e~~~ 151 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAAEELL 151 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9741 777899999999999 888887 3 35544211 22133 34677999999999988
Q ss_pred HH----cCCCEEEEecceecccc----c-cccCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCc
Q 021596 143 EA----EGIPYTYVESYCFDGYF----L-PNLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212 (310)
Q Consensus 143 ~~----~~~~~~i~rp~~~~~~~----~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 212 (310)
+. .+++++++||+.++|.. . ..+..... ....+.++.+++++++.++++|++|+|+++..+++++...++
T Consensus 152 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 231 (236)
T PF01370_consen 152 RDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGG 231 (236)
T ss_dssp HHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTE
T ss_pred cccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCC
Confidence 64 48999999998888865 0 11100000 013455688999999999999999999999999998876788
Q ss_pred eEEE
Q 021596 213 NLYI 216 (310)
Q Consensus 213 ~~~~ 216 (310)
+||+
T Consensus 232 ~yNi 235 (236)
T PF01370_consen 232 IYNI 235 (236)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8887
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=193.74 Aligned_cols=228 Identities=18% Similarity=0.212 Sum_probs=160.1
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCC
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+. .|+|+||||+||||+++++.|+++|++|++++|+.... . ......... ...++++.+|+.|.+++.++++++
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 78 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR-K-KTDHLLALDGAKERLKLFKADLLDEGSFELAIDGC 78 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch-h-hHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCC
Confidence 555 48999999999999999999999999999999885432 1 110000111 135789999999999999999999
Q ss_pred CEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc---------cccCCCCCC---
Q 021596 78 DVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV---------DRAHGAVEP--- 126 (310)
Q Consensus 78 d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~---------~~~~~~~~~--- 126 (310)
|+|||+|+... +.++.+++++|.+...+++||+ |+ ++... ++.. +..|
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~-~~~p~~~ 157 (325)
T PLN02989 79 ETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETF-FTNPSFA 157 (325)
T ss_pred CEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCC-CCchhHh
Confidence 99999998531 5567899999988532678887 44 22211 1111 2222
Q ss_pred --cchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCC---CC-CCCCCCeEEEecCCCceeEeeccchH
Q 021596 127 --AKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQP---GA-AAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 127 --~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..+.|+.+|..+|++++. .+++++++||+.++|......... .+ ....++.. .+ ...++|+|++|+
T Consensus 158 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dv 233 (325)
T PLN02989 158 EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP--FN--TTHHRFVDVRDV 233 (325)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--CC--CcCcCeeEHHHH
Confidence 135799999999988754 589999999988888643211000 00 00112221 11 234689999999
Q ss_pred HHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
|++++.+++.+.. ++.||+. ++ .+|+.|+++.+.+.++.
T Consensus 234 a~a~~~~l~~~~~-~~~~ni~-~~-~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 234 ALAHVKALETPSA-NGRYIID-GP-VVTIKDIENVLREFFPD 272 (325)
T ss_pred HHHHHHHhcCccc-CceEEEe-cC-CCCHHHHHHHHHHHCCC
Confidence 9999999987653 4578884 44 79999999999999874
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=175.35 Aligned_cols=177 Identities=28% Similarity=0.415 Sum_probs=139.6
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGH 86 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~~ 86 (310)
|+|+||||++|+.+++.|+++|++|++++|+ +++.+ . ..+++++.+|+.|++++.++++++|+||++++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~-----~~~~~---~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS-----PSKAE---D--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESS-----GGGHH---H--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecC-----chhcc---c--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 7999999999999999999999999999999 33332 1 679999999999999999999999999999986
Q ss_pred hh--hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccC---CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceeccc
Q 021596 87 AL--LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAH---GAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGY 160 (310)
Q Consensus 87 ~~--~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~---~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~ 160 (310)
.. .....+++++|++++ ++++|+ |+.+....... ....+....|...|...|+.+++.+++|+++||+.++++
T Consensus 71 ~~~~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~ 149 (183)
T PF13460_consen 71 PPKDVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGN 149 (183)
T ss_dssp TTTHHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBT
T ss_pred hcccccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeC
Confidence 54 667889999999999 999887 55443322110 011222345669999999999999999999999999997
Q ss_pred cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 161 FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
... ........+....++|+.+|+|++++.++++
T Consensus 150 ~~~------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 150 PSR------------SYRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp TSS------------SEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred CCc------------ceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 421 1111222445567999999999999999864
|
... |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=206.75 Aligned_cols=194 Identities=18% Similarity=0.243 Sum_probs=154.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+|||||||||+++++.|+++|++|++++|+.... . ..+++++.+|+.|.+++.++++++|+|||+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~----------~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA 69 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS----------W-PSSADFIAADIRDATAVESAMTGADVVAHCA 69 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh----------c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence 5899999999999999999999999999999973211 1 2368899999999999999999999999999
Q ss_pred cchh------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEeccee
Q 021596 85 GHAL------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCF 157 (310)
Q Consensus 85 ~~~~------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~ 157 (310)
+... +.++.+++++|++.+ ++++|+ |+.. |..+|+++++++++++++||+.+
T Consensus 70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~--------------------K~aaE~ll~~~gl~~vILRp~~V 128 (854)
T PRK05865 70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH--------------------QPRVEQMLADCGLEWVAVRCALI 128 (854)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH--------------------HHHHHHHHHHcCCCEEEEEeceE
Confidence 8643 667899999999998 889888 4421 88899999999999999999988
Q ss_pred ccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHH
Q 021596 158 DGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 235 (310)
+|.....+.... ........+.++..++|+|++|+|+++..+++.+...+++||++++. .+|+.|+++.+.+.
T Consensus 129 YGP~~~~~i~~l----l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~-~~Si~EIae~l~~~ 201 (854)
T PRK05865 129 FGRNVDNWVQRL----FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPG-ELTFRRIAAALGRP 201 (854)
T ss_pred eCCChHHHHHHH----hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCC-cccHHHHHHHHhhh
Confidence 876433222211 11122233445667899999999999999987654456789998654 89999999998874
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.1e-25 Score=188.20 Aligned_cols=215 Identities=18% Similarity=0.184 Sum_probs=147.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC---HHH-HHHHhc-----C
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN---HES-LVNAIK-----Q 76 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~-~~~~~~-----~ 76 (310)
.|+|||||||||++|++.|+++|++++++.|+.+.. .+. ..++.+|+.| .++ +..+++ +
T Consensus 1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~--~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcc--hHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence 389999999999999999999999888887774321 000 1122344444 343 333432 6
Q ss_pred CCEEEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHH
Q 021596 77 VDVVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~ 136 (310)
+|+|||+|+... ..++.+++++|++.+ ++ +|+ |+ |+.... .+..+.. +.+.|+.+|.
T Consensus 69 ~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-~i~~SS~~vyg~~~~~~~~E~~~~~-p~~~Y~~sK~ 145 (308)
T PRK11150 69 IEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTDDFIEEREYEK-PLNVYGYSKF 145 (308)
T ss_pred ccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEcchHHhCcCCCCCCccCCCCC-CCCHHHHHHH
Confidence 999999997421 566889999999988 74 666 44 554321 1221223 3578999999
Q ss_pred HHHHHHHH----cCCCEEEEecceeccccccc--cCCCCC-----CCCCCCeEEEe-cCCCceeEeeccchHHHHHHHHh
Q 021596 137 RIRRAVEA----EGIPYTYVESYCFDGYFLPN--LLQPGA-----AAPPRDKVVIL-GDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~rp~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|+++++ .+++++++||+.++|..... ...... ....+....++ ++++..++|+|++|+|+++..++
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~ 225 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFW 225 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHH
Confidence 99988875 48999999988887753211 100000 01233333333 55667899999999999999988
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+.+ .+++||+++ ++.+|+.|+++.+.+.+|.
T Consensus 226 ~~~--~~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 226 ENG--VSGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred hcC--CCCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 764 356888875 4589999999999999985
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=187.11 Aligned_cols=225 Identities=17% Similarity=0.188 Sum_probs=157.7
Q ss_pred EEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CCCEEE
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QVDVVI 81 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~d~Vi 81 (310)
|||||||||||+++++.|+++|+ +|+++.|..+.. +. . ......+..|+.+.+.++.+.+ ++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~~---~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---KF---L---NLADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---hh---h---hhhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 69999999999999999999997 688887763211 11 1 1122456788888888777664 799999
Q ss_pred Ecccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHH
Q 021596 82 STVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRA 141 (310)
Q Consensus 82 ~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~ 141 (310)
|+|+... +.++.+++++|++.+ + ++|+ |+ |+.... +++ +...+.+.|+.+|..+|++
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~-~~~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGR-ELERPLNVYGYSKFLFDQY 148 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCccccc-CcCCCCCHHHHHHHHHHHH
Confidence 9998532 567889999999988 6 5666 44 543211 122 2222367899999999998
Q ss_pred HHH------cCCCEEEEecceeccccccc------cCCCCC-CCCCCCeEEEe------cCCCceeEeeccchHHHHHHH
Q 021596 142 VEA------EGIPYTYVESYCFDGYFLPN------LLQPGA-AAPPRDKVVIL------GDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 142 l~~------~~~~~~i~rp~~~~~~~~~~------~~~~~~-~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+++ .+++++++||+.++|..... +..... ....+..+.++ ++|++.++|+|++|+++++..
T Consensus 149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~ 228 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW 228 (314)
T ss_pred HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence 864 24689999988877753211 000000 00223333333 457788999999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++.. ..+++||++++ +++|+.|+++.+.+.+|++..+...+
T Consensus 229 ~~~~--~~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 269 (314)
T TIGR02197 229 LLEN--GVSGIFNLGTG-RARSFNDLADAVFKALGKDEKIEYIP 269 (314)
T ss_pred HHhc--ccCceEEcCCC-CCccHHHHHHHHHHHhCCCCcceecc
Confidence 9977 24678888755 48999999999999999875444333
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=172.71 Aligned_cols=226 Identities=18% Similarity=0.217 Sum_probs=156.8
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEEccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVISTVG 85 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~~a~ 85 (310)
|+||||||+||++|+..|.+.||+|++++|+++..+ ...+..+. ..+.+.+... ++|+|||+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~--------~~~~~~v~-------~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS--------QNLHPNVT-------LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh--------hhcCcccc-------ccchhhhcccCCCCEEEECCC
Confidence 689999999999999999999999999999965431 11112222 2233444445 7999999999
Q ss_pred chh-----------------hhhHHHHHHHHHHcCC-ccEEcc-CC---CCCCccc-cCCCCCCcchhhHHHHHHHHHHH
Q 021596 86 HAL-----------------LADQVKIIAAIKEAGN-VTRFFP-SE---FGNDVDR-AHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 86 ~~~-----------------~~~~~~~~~aa~~~~~-v~~~v~-s~---~~~~~~~-~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
..- +..|..++++..+..+ .+.+|. |. ||+..+. .+....+..+..+....+-|+..
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a 145 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEA 145 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHH
Confidence 653 6677888888875432 455676 32 6665443 11122223344444444555555
Q ss_pred H---HcCCCEEEEecceecccc---ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEE
Q 021596 143 E---AEGIPYTYVESYCFDGYF---LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216 (310)
Q Consensus 143 ~---~~~~~~~i~rp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 216 (310)
. ..|.+++++|.|++.+.. ++.+... .+-..--..|+|.++++|||++|+++++..+++++. ..+.||.
T Consensus 146 ~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~----fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~-lsGp~N~ 220 (297)
T COG1090 146 LQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL----FKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ-LSGPFNL 220 (297)
T ss_pred hhhhhcCceEEEEEEEEEecCCCcchhhhcch----hhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC-CCCcccc
Confidence 3 358899999999998743 3332222 111122346889999999999999999999999876 4567999
Q ss_pred cCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHH
Q 021596 217 QPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNI 254 (310)
Q Consensus 217 ~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 254 (310)
++|. +++..|+.+.+.+.++++. +..+|...++..+
T Consensus 221 taP~-PV~~~~F~~al~r~l~RP~-~~~vP~~~~rl~L 256 (297)
T COG1090 221 TAPN-PVRNKEFAHALGRALHRPA-ILPVPSFALRLLL 256 (297)
T ss_pred cCCC-cCcHHHHHHHHHHHhCCCc-cccCcHHHHHHHh
Confidence 9877 9999999999999999875 4567776554444
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-24 Score=183.08 Aligned_cols=223 Identities=11% Similarity=0.087 Sum_probs=155.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|||||||||+++++.|+++|++|++++|+.+.. .....+..+. ..+++++.+|++|.+++.+++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET--EIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh--hHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 47899999999999999999999999999999963221 1111122221 2358899999999999999999999999
Q ss_pred Ecccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCC---C-c---c----ccCCCCCCcc------hh
Q 021596 82 STVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGN---D-V---D----RAHGAVEPAK------SV 130 (310)
Q Consensus 82 ~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~---~-~---~----~~~~~~~~~~------~~ 130 (310)
|+++... +.++.+++++|.+...++++|+ |+... . . . .++ ...+.. ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~~~ 162 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDER-SWSDQNFCRKFKLW 162 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcc-cCCCHHHHhhcccH
Confidence 9764321 6788999999988633889887 44211 1 0 0 011 111111 26
Q ss_pred hHHHHHHHHHHHH----HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 131 YYDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 131 y~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
|+.+|..+|+++. ..+++++++||+.++|......... ..+ .....+ +..+++|+++|+|++++.+++.
T Consensus 163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----~~~-~~~~~~--~~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----LKG-AAQMYE--NGVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----hcC-CcccCc--ccCcceEEHHHHHHHHHHHhcC
Confidence 9999999999884 3589999999999988654221111 111 112222 2346799999999999999998
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+...+ .|.++ +++.....++++++.+.+..
T Consensus 236 ~~~~~-r~~~~-~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 236 VSSYG-RYLCF-NHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred cccCC-cEEEe-cCCCccHHHHHHHHHHhCCC
Confidence 76554 45555 44345568899999998764
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-24 Score=192.67 Aligned_cols=236 Identities=16% Similarity=0.186 Sum_probs=165.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCc-hh--hH-----hHhh-----------hcCCcEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPS-KS--QL-----LDHF-----------KNLGVNFVV 61 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-~~--~~-----~~~l-----------~~~~~~~v~ 61 (310)
.++|+|||||||+|+++++.|++.+ .+|+++.|..+..++. +. +. ...+ ....++++.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 5799999999999999999999865 3689999986543211 10 00 0000 015689999
Q ss_pred ccCC-------CHHHHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc
Q 021596 62 GDVL-------NHESLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD 118 (310)
Q Consensus 62 ~D~~-------d~~~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~ 118 (310)
+|+. |.+.+..+++++|+|||+|+... +.++.+++++|++.++++++|+ |+ ||....
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~ 170 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG 170 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence 9998 55667788889999999998643 7788999999998744888887 33 443210
Q ss_pred ---ccCCC--------------------------------------------------CCCcchhhHHHHHHHHHHHHH-
Q 021596 119 ---RAHGA--------------------------------------------------VEPAKSVYYDVKARIRRAVEA- 144 (310)
Q Consensus 119 ---~~~~~--------------------------------------------------~~~~~~~y~~~K~~~e~~l~~- 144 (310)
+...+ ...+.+.|+.+|+.+|+++++
T Consensus 171 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~ 250 (491)
T PLN02996 171 LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF 250 (491)
T ss_pred eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh
Confidence 00000 011245799999999999976
Q ss_pred -cCCCEEEEecceecccccccc---CCCC------CC-CCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC--c-cC
Q 021596 145 -EGIPYTYVESYCFDGYFLPNL---LQPG------AA-APPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP--R-TL 210 (310)
Q Consensus 145 -~~~~~~i~rp~~~~~~~~~~~---~~~~------~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~-~~ 210 (310)
.+++++++||+.++|..-..+ .... .. ...+....+++++++.+++++++|++.++..++... . ..
T Consensus 251 ~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~ 330 (491)
T PLN02996 251 KENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGS 330 (491)
T ss_pred cCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCC
Confidence 479999999999988542221 1100 00 022334457788999999999999999999988652 1 23
Q ss_pred CceEEEcCC-CCccCHHHHHHHHHHHhCCC
Q 021596 211 NKNLYIQPP-GNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 211 ~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~ 239 (310)
+++||++++ ..++|+.|+++.+.+..+..
T Consensus 331 ~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 331 EIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence 567888743 25899999999999988753
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-24 Score=183.34 Aligned_cols=233 Identities=23% Similarity=0.333 Sum_probs=165.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
+|+||||||+||+++++.|+++|++|+++.|..... +.+. .... ..+++++.+|+.|.+++.++++ ++|+|||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~ 76 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS-PEAL---KRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIH 76 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc-hhhh---hhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 589999999999999999999999999887643221 1111 1111 1257788999999999999987 6999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+++... +.++.+++++|.+.+ ++++|+ |+ |+... .+.. +.. +...|+.+|..+|
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~-~~~-~~~~y~~sK~~~e 153 (328)
T TIGR01179 77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDS-PLG-PINPYGRSKLMSE 153 (328)
T ss_pred CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccC-CCC-CCCchHHHHHHHH
Confidence 998642 456788999999988 888887 33 43221 1122 222 3578999999999
Q ss_pred HHHHH-----cCCCEEEEecceeccccccccCCCC---CC--------CC--CCCeEEEe------cCCCceeEeeccch
Q 021596 140 RAVEA-----EGIPYTYVESYCFDGYFLPNLLQPG---AA--------AP--PRDKVVIL------GDGNPKAVYNKEDD 195 (310)
Q Consensus 140 ~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~---~~--------~~--~~~~~~~~------~~~~~~~~~i~~~D 195 (310)
++++. .+++++++||+.+++.......... .. .. ....+..+ ++++..++|++++|
T Consensus 154 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 154 RILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 98864 5899999999888775322110000 00 00 11222222 34567789999999
Q ss_pred HHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 196 IATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 196 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+|+++..++... ...++.||++++ +++|+.|+++.+++.+|++.++...+
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~ei~~~~~~~~g~~~~~~~~~ 285 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYG-QGFSVLEVIEAFKKVSGVDFPVELAP 285 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCC-CcccHHHHHHHHHHHhCCCcceEeCC
Confidence 999999998642 235678888754 48999999999999999887665444
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=184.76 Aligned_cols=211 Identities=18% Similarity=0.166 Sum_probs=153.2
Q ss_pred EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEEccc
Q 021596 8 LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVISTVG 85 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~~a~ 85 (310)
||||||||||++|++.|++.|++|+++.+. ..+|+.|.+++.++++ ++|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 699999999999999999999988766443 1489999999999888 5899999997
Q ss_pred chh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccC---CCCCCcchhhHHHHHHH
Q 021596 86 HAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAH---GAVEPAKSVYYDVKARI 138 (310)
Q Consensus 86 ~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~---~~~~~~~~~y~~~K~~~ 138 (310)
... ..++.+++++|++.+ ++++|+ |+ |+... ++.+ .+..|....|+.+|..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 521 456889999999998 899887 43 44321 1111 02223233599999999
Q ss_pred HHHHH----HcCCCEEEEecceeccccccc------cCCCCC----CC-CCCCeEEE-ecCCCceeEeeccchHHHHHHH
Q 021596 139 RRAVE----AEGIPYTYVESYCFDGYFLPN------LLQPGA----AA-PPRDKVVI-LGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 139 e~~l~----~~~~~~~i~rp~~~~~~~~~~------~~~~~~----~~-~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|++++ ..+++++++||+.++|..... +..... .. ..+.+..+ ++++++.++|+|++|+++++..
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~ 217 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence 98764 468999999998888764210 000000 00 12333344 6778888999999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+++.+. .++.||+.+ ++.+|+.|+++.+.+.+|.+..+.
T Consensus 218 ~~~~~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~~~ 256 (306)
T PLN02725 218 LMRRYS-GAEHVNVGS-GDEVTIKELAELVKEVVGFEGELV 256 (306)
T ss_pred HHhccc-cCcceEeCC-CCcccHHHHHHHHHHHhCCCCcee
Confidence 997653 345677764 458999999999999998765443
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-24 Score=186.04 Aligned_cols=228 Identities=18% Similarity=0.240 Sum_probs=155.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.|+||||||+||||+++++.|+++|++|++++|+.... ......+. ..+++++.+|+.|.+.+.++++++|+|||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 85 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS----LHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH 85 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 58999999999999999999999999999999973221 11111221 24588999999999999999999999999
Q ss_pred cccchh----------------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc---------cccC-CCC--
Q 021596 83 TVGHAL----------------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV---------DRAH-GAV-- 124 (310)
Q Consensus 83 ~a~~~~----------------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~---------~~~~-~~~-- 124 (310)
+|+... +.++.+++++|++.+++++||+ |+ |+... ++.. .+.
T Consensus 86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~ 165 (353)
T PLN02896 86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH 165 (353)
T ss_pred CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence 998532 1457789999988754788887 43 54211 1110 011
Q ss_pred ----CCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCC----CCCCCCe--EEEecC---CCce
Q 021596 125 ----EPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA----AAPPRDK--VVILGD---GNPK 187 (310)
Q Consensus 125 ----~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~---~~~~ 187 (310)
.++..+|+.+|..+|+++.. .+++++++||+.++|........... ....+.. ....+. ....
T Consensus 166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 245 (353)
T PLN02896 166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGS 245 (353)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCc
Confidence 11234799999999997754 58999999988887764321111000 0001111 111111 1123
Q ss_pred eEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 188 AVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
++|+|++|+|+++..+++.+.. ++.| +++ +..+++.|+++.+.+.++.
T Consensus 246 ~dfi~v~Dva~a~~~~l~~~~~-~~~~-~~~-~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 246 IALVHIEDICDAHIFLMEQTKA-EGRY-ICC-VDSYDMSELINHLSKEYPC 293 (353)
T ss_pred eeEEeHHHHHHHHHHHHhCCCc-CccE-Eec-CCCCCHHHHHHHHHHhCCC
Confidence 5999999999999999976543 3455 443 4479999999999999873
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-24 Score=180.90 Aligned_cols=204 Identities=16% Similarity=0.156 Sum_probs=142.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
.|+||||||+||||+++++.|+++|++|+...+ |+.|.+.+...++ ++|+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~Vi 62 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVF 62 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEE
Confidence 489999999999999999999999999864322 2344555555555 799999
Q ss_pred Ecccchh------------------hhhHHHHHHHHHHcCCccEEccCC---CCCC----------ccccCCCCCCcchh
Q 021596 82 STVGHAL------------------LADQVKIIAAIKEAGNVTRFFPSE---FGND----------VDRAHGAVEPAKSV 130 (310)
Q Consensus 82 ~~a~~~~------------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~~----------~~~~~~~~~~~~~~ 130 (310)
|+|+... +.++.+++++|++.+ ++++++|+ |+.. ..+++ ++.++.+.
T Consensus 63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~-~p~~~~s~ 140 (298)
T PLN02778 63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDAHPLGSGIGFKEED-TPNFTGSF 140 (298)
T ss_pred ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCCCCcccCCCCCcCC-CCCCCCCc
Confidence 9998641 567889999999998 88877743 4321 12222 33333578
Q ss_pred hHHHHHHHHHHHHHcCCCEEEEecceecccc--c-cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 131 YYDVKARIRRAVEAEGIPYTYVESYCFDGYF--L-PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 131 y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
||.+|..+|++++.+. +..++|+.+..+.. . ..+.... +.+..+...+ .++++++|+++++..++...
T Consensus 141 Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~---~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~ 211 (298)
T PLN02778 141 YSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKI---TRYEKVVNIP-----NSMTILDELLPISIEMAKRN 211 (298)
T ss_pred hHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHH---HcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCC
Confidence 9999999999998764 56677875533321 1 1221111 2233333322 26999999999999998754
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
. ++.||+.++ +.+|..|+++.+++.+|.+.++..+..
T Consensus 212 ~--~g~yNigs~-~~iS~~el~~~i~~~~~~~~~~~~~~i 248 (298)
T PLN02778 212 L--TGIYNFTNP-GVVSHNEILEMYRDYIDPSFTWKNFTL 248 (298)
T ss_pred C--CCeEEeCCC-CcccHHHHHHHHHHHhCCCceeccccH
Confidence 3 468998654 589999999999999997654433333
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-24 Score=179.64 Aligned_cols=243 Identities=21% Similarity=0.231 Sum_probs=173.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|+++.+++||||+||+|++++++|++++ .+|++++...... ....+.... ....++.+.+|+.|...+..+++++
T Consensus 1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~- 77 (361)
T KOG1430|consen 1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA- 77 (361)
T ss_pred CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-
Confidence 6778899999999999999999999998 7899999885422 111111111 2566899999999999999999999
Q ss_pred EEEEcccch-h--------------hhhHHHHHHHHHHcCCccEEcc-CCCC-----CCcc--ccCCCC-CCcchhhHHH
Q 021596 79 VVISTVGHA-L--------------LADQVKIIAAIKEAGNVTRFFP-SEFG-----NDVD--RAHGAV-EPAKSVYYDV 134 (310)
Q Consensus 79 ~Vi~~a~~~-~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~-----~~~~--~~~~~~-~~~~~~y~~~ 134 (310)
.|+|+|+.. . +.++.+++++|++.+ ++++|+ |+.. .+.. .++.|. ....++|+.+
T Consensus 78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~s 156 (361)
T KOG1430|consen 78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGES 156 (361)
T ss_pred eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchH
Confidence 666666532 2 888999999999999 999998 5421 1101 111111 1224689999
Q ss_pred HHHHHHHHHHcC----CCEEEEecceeccccccccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHHHh-----
Q 021596 135 KARIRRAVEAEG----IPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAV----- 204 (310)
Q Consensus 135 K~~~e~~l~~~~----~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l----- 204 (310)
|..+|+++++.. +.++.+||..++|..-+.+....... ..+.-....+.++...++++++.++.+...+.
T Consensus 157 Ka~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~ 236 (361)
T KOG1430|consen 157 KALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLD 236 (361)
T ss_pred HHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHh
Confidence 999999998743 77999998888876544333322111 23444566677778889999998887655544
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce-eeecCHH
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE-REYVSEE 248 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~~ 248 (310)
..+...|+.|++... +++..-++...+.+.+|...+ ....|..
T Consensus 237 ~~~~~~Gq~yfI~d~-~p~~~~~~~~~l~~~lg~~~~~~~~~p~~ 280 (361)
T KOG1430|consen 237 KSPSVNGQFYFITDD-TPVRFFDFLSPLVKALGYCLPSSIKLPLF 280 (361)
T ss_pred cCCccCceEEEEeCC-CcchhhHHHHHHHHhcCCCCCceeecchH
Confidence 234567888998854 467777777799999998877 5555543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=173.70 Aligned_cols=211 Identities=23% Similarity=0.278 Sum_probs=149.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCC-HHHHHHHh-cCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLN-HESLVNAI-KQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d-~~~~~~~~-~~~d~V 80 (310)
+|+|+||||||++|+++++.|+++|++|++++|+.+ +.. ..+ ...+++++.+|+.| .+++.+.+ .++|+|
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~--~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD-----KAK--TSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH-----HHH--HhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 689999999999999999999999999999999843 221 111 12468999999998 57787888 689999
Q ss_pred EEcccchh-----------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC---c---chhhHHHHHHHHHHH
Q 021596 81 ISTVGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP---A---KSVYYDVKARIRRAV 142 (310)
Q Consensus 81 i~~a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~---~---~~~y~~~K~~~e~~l 142 (310)
|++++... ..++.++++++++.+ ++++|+ |+.+........+..+ . ...+...|..+|+++
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l 168 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYI 168 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHH
Confidence 99987632 235789999999988 899888 5543211100001111 1 122335788999999
Q ss_pred HHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCC--
Q 021596 143 EAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPG-- 220 (310)
Q Consensus 143 ~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~-- 220 (310)
++.+++++++||+++++.... +.............+++.+|+|++++.++..+...+.++.+++..
T Consensus 169 ~~~gi~~~iirpg~~~~~~~~------------~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (251)
T PLN00141 169 RKSGINYTIVRPGGLTNDPPT------------GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADA 236 (251)
T ss_pred HhcCCcEEEEECCCccCCCCC------------ceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCC
Confidence 999999999999988765211 111111111122357999999999999998877667778887532
Q ss_pred CccCHHHHHHHHHH
Q 021596 221 NIYSFNDLVSLWER 234 (310)
Q Consensus 221 ~~~s~~e~~~~~~~ 234 (310)
...++.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~ 250 (251)
T PLN00141 237 PKRSYKDLFASIKQ 250 (251)
T ss_pred CchhHHHHHHHhhc
Confidence 24788888887764
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-24 Score=168.45 Aligned_cols=225 Identities=21% Similarity=0.356 Sum_probs=170.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+||||.||||+||++.|..+||+|++++---.+. |......+..+.++++.-|+..+ ++..+|.|||+
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~---k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhL 98 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR---KENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHL 98 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc---hhhcchhccCcceeEEEeechhH-----HHHHhhhhhhh
Confidence 47999999999999999999999999999998764432 22222334556788888887654 67889999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCccccC--------CCCCCcchhhHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVDRAH--------GAVEPAKSVYYDVKA 136 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~~~~--------~~~~~~~~~y~~~K~ 136 (310)
|++.+ ..++.+++-.|++.+ +||++ | .||.+..+.. +|.. +.+.|...|.
T Consensus 99 Aapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpig-pr~cydegKr 175 (350)
T KOG1429|consen 99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIG-PRSCYDEGKR 175 (350)
T ss_pred ccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCC-chhhhhHHHH
Confidence 98765 778899999999987 55554 4 3887544421 1223 3678999999
Q ss_pred HHHHHHHH----cCCCEEEEe-cceeccccc-------cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 137 RIRRAVEA----EGIPYTYVE-SYCFDGYFL-------PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~r-p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|.+... .|+++.|.| .++|++... ..+.. ..+.+.++.++++|.+.++|.++.|+++.+++++
T Consensus 176 ~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~---q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm 252 (350)
T KOG1429|consen 176 VAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIA---QALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLM 252 (350)
T ss_pred HHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHH---HHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHh
Confidence 99988754 589999999 455544321 11111 1267788999999999999999999999999999
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
+.+.. +.+|+..|+ .+|+.|+++.+.+..+....+...
T Consensus 253 ~s~~~--~pvNiGnp~-e~Tm~elAemv~~~~~~~s~i~~~ 290 (350)
T KOG1429|consen 253 ESDYR--GPVNIGNPG-EFTMLELAEMVKELIGPVSEIEFV 290 (350)
T ss_pred cCCCc--CCcccCCcc-ceeHHHHHHHHHHHcCCCcceeec
Confidence 88743 447888776 799999999999999655444444
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=173.09 Aligned_cols=228 Identities=19% Similarity=0.260 Sum_probs=172.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
.++++||||.||||++.+..+...- ++.+.+..-.=-+ . ...+ +....++..++++|+.+...+..+|. .+|
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s--~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id 82 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS--N-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEID 82 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc--c-cchhhhhccCCCceEeeccccchHHHHhhhccCchh
Confidence 3689999999999999999998863 3333332211101 0 1111 22235789999999999999888887 689
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCccc----cCCCCCCcchhhHHHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVDR----AHGAVEPAKSVYYDVK 135 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~~----~~~~~~~~~~~y~~~K 135 (310)
.|+|.|+... +..+..++++++..|++++||+ | +||..... +. +...+.++|+.+|
T Consensus 83 ~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-s~~nPtnpyAasK 161 (331)
T KOG0747|consen 83 TVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-SLLNPTNPYAASK 161 (331)
T ss_pred hhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-ccCCCCCchHHHH
Confidence 9999998765 6678899999999988999998 3 58775432 22 2333588999999
Q ss_pred HHHHHHHHH----cCCCEEEEecceecc-cc-----ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDG-YF-----LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+++|+.+++ ++++++++|.+.++| +. ++.++... ..+++..+.++|.+.++|+|++|+++++..+++
T Consensus 162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~---~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~ 238 (331)
T KOG0747|consen 162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLA---MRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLE 238 (331)
T ss_pred HHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHH---HhCCCcceecCcccceeeEeHHHHHHHHHHHHh
Confidence 999999975 689999999665555 43 23222211 456778899999999999999999999999998
Q ss_pred CCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 206 DPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
.+. .|++||++. .+..+..|+++.+.+...+..
T Consensus 239 Kg~-~geIYNIgt-d~e~~~~~l~k~i~eli~~~~ 271 (331)
T KOG0747|consen 239 KGE-LGEIYNIGT-DDEMRVIDLAKDICELFEKRL 271 (331)
T ss_pred cCC-ccceeeccC-cchhhHHHHHHHHHHHHHHhc
Confidence 843 688999875 458999999999999987643
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=185.29 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=166.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhh---------c-CCcEEEEccCCC------H
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK---------N-LGVNFVVGDVLN------H 67 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~---------~-~~~~~v~~D~~d------~ 67 (310)
+|+|||||||+|+++++.|+++| .+|+++.|+.+.. .......+.+. . .+++++.+|+.+ .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEE-HAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHH-HHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 58999999999999999999998 5699999984321 00001111110 0 468999999875 3
Q ss_pred HHHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCC----
Q 021596 68 ESLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAV---- 124 (310)
Q Consensus 68 ~~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~---- 124 (310)
+.+..+.+++|+|||+++... +.++.+++++|.+.+ ++++++ |+ ++.... .++.+.
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~ 158 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPP 158 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCccccccccccc
Confidence 567777789999999998532 567889999999987 887777 44 322110 011011
Q ss_pred CCcchhhHHHHHHHHHHHHH---cCCCEEEEecceeccccccccCCC-CCC--CCCC-CeEEEecCCC-ceeEeeccchH
Q 021596 125 EPAKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGYFLPNLLQP-GAA--APPR-DKVVILGDGN-PKAVYNKEDDI 196 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~-~~~~~i~~~D~ 196 (310)
......|+.+|+.+|++++. .|++++++||+.+++......... ... .... .....++... ...++++++|+
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddv 238 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYV 238 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHH
Confidence 11235799999999998875 389999999999987521111000 000 0000 0001122222 35689999999
Q ss_pred HHHHHHHhcCCccC--CceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHh
Q 021596 197 ATYTIKAVDDPRTL--NKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQE 256 (310)
Q Consensus 197 a~~~~~~l~~~~~~--~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 256 (310)
+++++.++..+... +++||++++. .+++.|+++.+.+ +|.+++ .++.++|...+..
T Consensus 239 a~ai~~~~~~~~~~~~~~~~~v~~~~-~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~~ 296 (367)
T TIGR01746 239 ARAIVALSSQPAASAGGPVFHVVNPE-PVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLED 296 (367)
T ss_pred HHHHHHHHhCCCcccCCceEEecCCC-CCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHHH
Confidence 99999998776532 7889998654 8999999999999 888765 6788888776654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.7e-23 Score=167.58 Aligned_cols=239 Identities=21% Similarity=0.263 Sum_probs=175.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
++||||||+||||+|.+-+|+++|+.|.+++.-.... .......+.+.. .++.++++|++|.+.++++|+ ++|.|
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~-~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY-LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc-hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 7899999999999999999999999999987654443 333334444444 679999999999999999999 79999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEccC----CCCCCccc----cCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFPS----EFGNDVDR----AHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s----~~~~~~~~----~~~~~~~~~~~y~~~K~~ 137 (310)
+|.|+... +.++.+++++|++.+ ++.+|+| +||.+... +. +...+.++||.+|..
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~-~t~~p~~pyg~tK~~ 159 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEED-PTDQPTNPYGKTKKA 159 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcC-CCCCCCCcchhhhHH
Confidence 99998654 888999999999999 9999983 36665332 22 333357899999999
Q ss_pred HHHHHHH----cCCCEEEEe-cceeccc---------------cccccCCCCCCCCCC----CeEEEecCCCceeEeecc
Q 021596 138 IRRAVEA----EGIPYTYVE-SYCFDGY---------------FLPNLLQPGAAAPPR----DKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~r-p~~~~~~---------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~ 193 (310)
+|+.... .++..+.+| ++.++.. ..+...+..+..... +.-....+|+..++++++
T Consensus 160 iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v 239 (343)
T KOG1371|consen 160 IEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHV 239 (343)
T ss_pred HHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceee
Confidence 9999976 356778888 4444411 111111111100000 001112245778999999
Q ss_pred chHHHHHHHHhcCCcc--CCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 194 DDIATYTIKAVDDPRT--LNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
-|.|+....++...+. .-++||+. .+...+..|+...+++.+|+++++..++.
T Consensus 240 ~Dla~~h~~al~k~~~~~~~~i~Nlg-tg~g~~V~~lv~a~~k~~g~~~k~~~v~~ 294 (343)
T KOG1371|consen 240 LDLADGHVAALGKLRGAAEFGVYNLG-TGKGSSVLELVTAFEKALGVKIKKKVVPR 294 (343)
T ss_pred EehHHHHHHHhhccccchheeeEeec-CCCCccHHHHHHHHHHHhcCCCCccccCC
Confidence 9999999999976542 33577776 45588999999999999999988877765
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=176.05 Aligned_cols=225 Identities=19% Similarity=0.212 Sum_probs=150.8
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGH 86 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~~ 86 (310)
|||||||||||+++++.|+++|++|++++|+..... .+.... ..|+.. +.+..++.++|+|||+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA--------NTKWEG----YKPWAP-LAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC--------ccccee----eecccc-cchhhhcCCCCEEEECCCC
Confidence 699999999999999999999999999999854321 000011 112222 4455677899999999975
Q ss_pred hh-----------------hhhHHHHHHHHHHcCCcc--EEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHH
Q 021596 87 AL-----------------LADQVKIIAAIKEAGNVT--RFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 87 ~~-----------------~~~~~~~~~aa~~~~~v~--~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
.. +.++.+++++|++++ ++ ++|+ |+ |+.... .++.+.. +.+.|+..+...|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~-~~~~~~~~~~~~e~ 145 (292)
T TIGR01777 68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPA-GDDFLAELCRDWEE 145 (292)
T ss_pred CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCC-CCChHHHHHHHHHH
Confidence 21 455889999999998 63 4555 33 443211 1110121 23345555655665
Q ss_pred HHH---HcCCCEEEEecceecccccc---ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceE
Q 021596 141 AVE---AEGIPYTYVESYCFDGYFLP---NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNL 214 (310)
Q Consensus 141 ~l~---~~~~~~~i~rp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 214 (310)
.+. +.+++++++||+.++|.... .+.... ..... ..+++++..+++++++|+|+++..+++.+.. +++|
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~~---~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~ 220 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPF-RLGLG---GPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPV 220 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCcchhHHHHHHH-hcCcc---cccCCCCcccccEeHHHHHHHHHHHhcCccc-CCce
Confidence 543 45899999999998875321 111000 00111 1246778889999999999999999987653 4678
Q ss_pred EEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHH
Q 021596 215 YIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKN 253 (310)
Q Consensus 215 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 253 (310)
|++++ +.+|+.|+++.+++.+|.+.. ..+|...+...
T Consensus 221 ~~~~~-~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~ 257 (292)
T TIGR01777 221 NATAP-EPVRNKEFAKALARALHRPAF-FPVPAFVLRAL 257 (292)
T ss_pred EecCC-CccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHH
Confidence 88755 489999999999999998754 44777665443
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-23 Score=163.16 Aligned_cols=231 Identities=23% Similarity=0.289 Sum_probs=184.4
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC-cEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
...|+|||||+|+.++++|.+.|.+|++-.|..+.+ +.. ++.+...| +-+...|+.|+++++++.+...+||++.
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~r~---lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-PRH---LKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccc-hhh---eeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 467999999999999999999999999999986544 221 12222223 6788899999999999999999999999
Q ss_pred cchh-----------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 021596 85 GHAL-----------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYV 152 (310)
Q Consensus 85 ~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~ 152 (310)
|... ..+...+...|++.| |.+||+ |..+.... . .+.|=++|+..|..+++.=.+.||+
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~------s--~Sr~LrsK~~gE~aVrdafPeAtIi 209 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVK------S--PSRMLRSKAAGEEAVRDAFPEATII 209 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcccccc------C--hHHHHHhhhhhHHHHHhhCCcceee
Confidence 8643 677889999999999 999998 88874421 1 3455599999999999988889999
Q ss_pred ecceeccc---cccccCCCCCCCCCCCeEEEecCCC-ceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHH
Q 021596 153 ESYCFDGY---FLPNLLQPGAAAPPRDKVVILGDGN-PKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDL 228 (310)
Q Consensus 153 rp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~ 228 (310)
||..++|. ++..+.... .+-+.+++++.|+ +...++++.|+|.+|..++.+|...|++|.++||. .+...|+
T Consensus 210 rPa~iyG~eDrfln~ya~~~---rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~-~yql~eL 285 (391)
T KOG2865|consen 210 RPADIYGTEDRFLNYYASFW---RKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD-RYQLSEL 285 (391)
T ss_pred chhhhcccchhHHHHHHHHH---HhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc-hhhHHHH
Confidence 99998885 333332221 2245577777764 45689999999999999999999999999999887 9999999
Q ss_pred HHHHHHHhCCCceeeecCHHHHHHH
Q 021596 229 VSLWERKIGKTLEREYVSEEQLLKN 253 (310)
Q Consensus 229 ~~~~~~~~g~~~~~~~~~~~~~~~~ 253 (310)
++.+-+...+-..+...|..-+...
T Consensus 286 vd~my~~~~~~~ry~r~~mP~f~a~ 310 (391)
T KOG2865|consen 286 VDIMYDMAREWPRYVRLPMPIFKAM 310 (391)
T ss_pred HHHHHHHHhhccccccCCcHHHHHH
Confidence 9999999988667777776555443
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-23 Score=157.28 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=178.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~ 79 (310)
|++|+|||++|.+|+++.+.+.+.|. +=+++.-+ -.+|+++.++.+++|+ ++..
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekPth 58 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESEKPTH 58 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhccCCce
Confidence 57999999999999999999999986 33333222 0479999999999998 7899
Q ss_pred EEEcccchh----------------hhhHHHHHHHHHHcCCccEEcc--CC--C------CCCccc-cCCCCCCcchhhH
Q 021596 80 VISTVGHAL----------------LADQVKIIAAIKEAGNVTRFFP--SE--F------GNDVDR-AHGAVEPAKSVYY 132 (310)
Q Consensus 80 Vi~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~--s~--~------~~~~~~-~~~~~~~~~~~y~ 132 (310)
|||+|+..+ ....-|++..|-++| ++++++ |+ | ..++.. .+.|+.|....|+
T Consensus 59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYs 137 (315)
T KOG1431|consen 59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYS 137 (315)
T ss_pred eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHH
Confidence 999997654 445678999999999 888876 43 3 222222 2236666667788
Q ss_pred HHHHHHH----HHHHHcCCCEEEEecceeccc---c-------ccccCCCCCCC--CCCCeEEEecCCCceeEeeccchH
Q 021596 133 DVKARIR----RAVEAEGIPYTYVESYCFDGY---F-------LPNLLQPGAAA--PPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 133 ~~K~~~e----~~l~~~~~~~~i~rp~~~~~~---~-------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
.+|+.+. .+..+.|..++.+-|..++|. + +|.+++..-.. -....+.++|+|...+.|+|++|+
T Consensus 138 yAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DL 217 (315)
T KOG1431|consen 138 YAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDL 217 (315)
T ss_pred HHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHH
Confidence 8886653 445567999998887666653 1 22222211000 122368899999999999999999
Q ss_pred HHHHHHHhcCCccCCceEEEc-CCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEec
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQ-PPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNG 275 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~-~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 275 (310)
|+++.+++.+-.... .+++. +..+.+|++|+++.+.++.+...+...-..+ .+|
T Consensus 218 A~l~i~vlr~Y~~vE-piils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK------------------------~DG 272 (315)
T KOG1431|consen 218 ADLFIWVLREYEGVE-PIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK------------------------SDG 272 (315)
T ss_pred HHHHHHHHHhhcCcc-ceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC------------------------CCC
Confidence 999999997654332 34443 3445899999999999999987665543321 111
Q ss_pred ccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 276 VQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
. +....+ +.++.+++|++++|+|+++|++.
T Consensus 273 q---~kKtas-nsKL~sl~pd~~ft~l~~ai~~t 302 (315)
T KOG1431|consen 273 Q---FKKTAS-NSKLRSLLPDFKFTPLEQAISET 302 (315)
T ss_pred C---cccccc-hHHHHHhCCCcccChHHHHHHHH
Confidence 1 111111 35789999999999999999875
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.4e-24 Score=173.77 Aligned_cols=213 Identities=19% Similarity=0.241 Sum_probs=147.0
Q ss_pred EEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchh-hHhHhh----hcCCcE----EEEccCCCHHHHHHHhc-
Q 021596 7 ILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKS-QLLDHF----KNLGVN----FVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~-~~~~~l----~~~~~~----~v~~D~~d~~~~~~~~~- 75 (310)
||||||+|.||+.|+++|++.+ .++++++|+.. +. ....++ ..+++. .+.+|+.|.+.+..+|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~-----~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~ 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDEN-----KLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HH-----HHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChh-----HHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh
Confidence 7999999999999999999998 57999999832 22 222333 223454 45899999999999999
Q ss_pred -CCCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHH
Q 021596 76 -QVDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 76 -~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e 139 (310)
++|+|||+|+..+ +.++.|++++|.+++ +++||+-|-.. ... +.+.||.+|+.+|
T Consensus 76 ~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDK-------Av~-PtnvmGatKrlaE 146 (293)
T PF02719_consen 76 YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDK-------AVN-PTNVMGATKRLAE 146 (293)
T ss_dssp -T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECG-------CSS---SHHHHHHHHHH
T ss_pred cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccc-------cCC-CCcHHHHHHHHHH
Confidence 8999999999865 888999999999999 99999833221 112 3689999999999
Q ss_pred HHHHHc-------CCCEEEEecceeccc---cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCcc
Q 021596 140 RAVEAE-------GIPYTYVESYCFDGY---FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRT 209 (310)
Q Consensus 140 ~~l~~~-------~~~~~i~rp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 209 (310)
+++... +..++++|+|.+.+. .+|.+... ++.+......+++..+-|+++++.++.++.++....
T Consensus 147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Q----i~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~- 221 (293)
T PF02719_consen 147 KLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQ----IKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAK- 221 (293)
T ss_dssp HHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHH----HHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---
T ss_pred HHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHH----HHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCC-
Confidence 999763 356899998888763 34444443 333333444556778899999999999999987653
Q ss_pred CCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 210 LNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 210 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
++.+++..-++++++.|+++.+.+..|..
T Consensus 222 -~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 222 -GGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp -TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred -CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 34456655667999999999999999853
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=175.01 Aligned_cols=214 Identities=17% Similarity=0.224 Sum_probs=170.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhcC--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIKQ-- 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~~-- 76 (310)
.++|+||||+|.||+.+++++++.+ .+++.++|+..+.. ....++.. ....++.+|+.|.+.+..++++
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~----~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLY----LIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHH----HHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 5899999999999999999999998 57889999854321 12233333 5678899999999999999997
Q ss_pred CCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHH
Q 021596 77 VDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 77 ~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|+|||+|+..+ +.++.|+++||.++| |++||. |+=- ... |.+.||.+|+.+|+
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDK--------AV~-PtNvmGaTKr~aE~ 395 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDK--------AVN-PTNVMGATKRLAEK 395 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCc--------ccC-CchHhhHHHHHHHH
Confidence 999999999765 889999999999999 999998 4421 122 36899999999999
Q ss_pred HHHHc-------CCCEEEEecceeccc---cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC
Q 021596 141 AVEAE-------GIPYTYVESYCFDGY---FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210 (310)
Q Consensus 141 ~l~~~-------~~~~~i~rp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 210 (310)
++... +..++.+|.|.+.|. ..|-+... ++.+......+++-.+-|+++.|.++.++++.... .
T Consensus 396 ~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~Q----I~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~--~ 469 (588)
T COG1086 396 LFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQ----IAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA--K 469 (588)
T ss_pred HHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHH----HHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhc--C
Confidence 98753 356899999988874 23444433 34445555666788889999999999999999765 3
Q ss_pred CceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 211 NKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 211 ~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
++.+++..-|+++++.|+++.+.+..|
T Consensus 470 gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 470 GGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred CCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 555677667789999999999999997
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=164.95 Aligned_cols=229 Identities=24% Similarity=0.312 Sum_probs=173.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+||||||++|+++++.|+++|++|++++|+. .+. ..+. .+++++.+|+.+++++..+++|.|.++++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~-----~~~---~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~ 71 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP-----EAA---AALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS 71 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCH-----HHH---Hhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence 6899999999999999999999999999999994 344 3333 789999999999999999999999999988
Q ss_pred cchh------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecce
Q 021596 85 GHAL------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYC 156 (310)
Q Consensus 85 ~~~~------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~ 156 (310)
+... ......+++++++.+ .+++++. |.++.... ....|..+|..+|+.+.+.+++++++|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~--------~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~ 143 (275)
T COG0702 72 GLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA--------SPSALARAKAAVEAALRSSGIPYTTLRRAA 143 (275)
T ss_pred cccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC--------CccHHHHHHHHHHHHHHhcCCCeEEEecCe
Confidence 8431 334445566666543 2677777 66664321 235677999999999999999999999655
Q ss_pred eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHh
Q 021596 157 FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 236 (310)
++.+....+... ......+....+....+++..+|++.++...+..+...+++|.+.++. ..+..++.+.+.+..
T Consensus 144 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~-~~~~~~~~~~l~~~~ 218 (275)
T COG0702 144 FYLGAGAAFIEA----AEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPE-ALTLAELASGLDYTI 218 (275)
T ss_pred eeeccchhHHHH----HHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCc-eecHHHHHHHHHHHh
Confidence 555433221111 111122222223337899999999999999998887788999999874 899999999999999
Q ss_pred CCCceeeecCHHHHHHHHH
Q 021596 237 GKTLEREYVSEEQLLKNIQ 255 (310)
Q Consensus 237 g~~~~~~~~~~~~~~~~~~ 255 (310)
|++..+...+.........
T Consensus 219 gr~~~~~~~~~~~~~~~~~ 237 (275)
T COG0702 219 GRPVGLIPEALAALTLALS 237 (275)
T ss_pred CCcceeeCCcHHHHHHHhc
Confidence 9999886666655544443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-21 Score=172.88 Aligned_cols=217 Identities=17% Similarity=0.154 Sum_probs=149.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhh-----------cCCcEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-----------NLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~-----------~~~~~~v~~D~~d~~~~~ 71 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+...+ ..+. ..+++++.+|+.|.+++.
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~-----ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~ 154 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSA-----QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG 154 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence 36899999999999999999999999999999983 333211 1111 124789999999999999
Q ss_pred HHhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHH
Q 021596 72 NAIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
+++.++|+|||++|... ..++.+++++|++.+ ++|||+ |+.+................|...|..
T Consensus 155 ~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kra 233 (576)
T PLN03209 155 PALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRK 233 (576)
T ss_pred HHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHHHH
Confidence 99999999999998642 356889999999988 999988 666542111000001123345578999
Q ss_pred HHHHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-cCCceEEE
Q 021596 138 IRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR-TLNKNLYI 216 (310)
Q Consensus 138 ~e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~ 216 (310)
+|+.++..|++|++||||++.+...... ....+............+..+|+|++++.++.++. ..++++.+
T Consensus 234 aE~~L~~sGIrvTIVRPG~L~tp~d~~~--------~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvev 305 (576)
T PLN03209 234 AEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEV 305 (576)
T ss_pred HHHHHHHcCCCEEEEECCeecCCccccc--------cccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEE
Confidence 9999999999999999998864321110 01111111111111246889999999999998664 56788888
Q ss_pred cCCCCccCHHHHHHHHHHH
Q 021596 217 QPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 217 ~~~~~~~s~~e~~~~~~~~ 235 (310)
.+.. ......+.+.+..+
T Consensus 306 i~~~-~~p~~~~~~~~~~i 323 (576)
T PLN03209 306 IAET-TAPLTPMEELLAKI 323 (576)
T ss_pred EeCC-CCCCCCHHHHHHhc
Confidence 7543 33445555555443
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=170.92 Aligned_cols=234 Identities=17% Similarity=0.206 Sum_probs=161.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHhHhh--------------------hcCCcEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHF--------------------KNLGVNFV 60 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l--------------------~~~~~~~v 60 (310)
.++|+|||||||+|+++++.|++.+. +|+++.|..+..+ ........+ ....++++
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~-a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEA-AIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchh-HHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 57999999999999999999998764 6899999754321 111110111 02347889
Q ss_pred EccCCCH------HHHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc-
Q 021596 61 VGDVLNH------ESLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV- 117 (310)
Q Consensus 61 ~~D~~d~------~~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~- 117 (310)
.+|+.++ +.++.+.+++|+|||+|+... +.++.+++++|++.+++++||+ |+ ||...
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G 277 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG 277 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence 9999986 466667778999999998754 7788999999998765788887 33 33321
Q ss_pred --cccCCC---------------------------------------------------------CCCcchhhHHHHHHH
Q 021596 118 --DRAHGA---------------------------------------------------------VEPAKSVYYDVKARI 138 (310)
Q Consensus 118 --~~~~~~---------------------------------------------------------~~~~~~~y~~~K~~~ 138 (310)
.+...+ ..++++.|..+|+.+
T Consensus 278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA 357 (605)
T PLN02503 278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG 357 (605)
T ss_pred eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence 000000 022347899999999
Q ss_pred HHHHHHc--CCCEEEEecceeccc-------cccc--cCCC-CCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 139 RRAVEAE--GIPYTYVESYCFDGY-------FLPN--LLQP-GAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 139 e~~l~~~--~~~~~i~rp~~~~~~-------~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
|+++++. ++|++|+||+++.+. +..+ .... ......+..-.++++++...++|+++.++.+++.++..
T Consensus 358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~ 437 (605)
T PLN02503 358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK 437 (605)
T ss_pred HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence 9999874 799999999998542 1111 0000 00001222233667888999999999999998888421
Q ss_pred -C---ccCCceEEEcCC-CCccCHHHHHHHHHHHhCC
Q 021596 207 -P---RTLNKNLYIQPP-GNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 207 -~---~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~ 238 (310)
. ...+++||++++ .+++++.|+.+.+.+....
T Consensus 438 ~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 438 HGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 1 124678998743 3699999999999987653
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=154.42 Aligned_cols=235 Identities=18% Similarity=0.222 Sum_probs=168.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh---hhcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH---FKNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~---l~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
+++.||||-||+-|+.|++.|+++|++|+++.|+.+..++.+. .+.. +..+.++++.+|++|...+.++++ .+|
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 4789999999999999999999999999999999766544432 2222 223447899999999999999998 789
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCC-ccEEcc-CC---CCCC----ccccCCCCCCcchhhHHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGN-VTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~-v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~ 134 (310)
-|+|+++... ..++.++++|.+..+. -.+|+. |+ ||.. ..+.+ |+.| .++|+.+
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~T-PFyP-rSPYAvA 158 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETT-PFYP-RSPYAVA 158 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCC-CCCC-CCHHHHH
Confidence 9999998765 6678999999999872 134554 32 6643 22333 6666 8899999
Q ss_pred HHHHHHHHH----HcCCCEEEEecceeccc--------cccccCCCCCCC--CCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 135 KARIRRAVE----AEGIPYTYVESYCFDGY--------FLPNLLQPGAAA--PPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 135 K~~~e~~l~----~~~~~~~i~rp~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
|..+-.... .+|+-.+ .|+.+.. |...-+...... .....-...|+-+..++|-+..|.++++
T Consensus 159 KlYa~W~tvNYResYgl~Ac---nGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 159 KLYAYWITVNYRESYGLFAC---NGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHheeeehHhhcCceee---cceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 998865553 3454322 2222222 111100000000 1223356678889999999999999999
Q ss_pred HHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 201 IKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
..++++++ ...|.+. .+++.|.+|+++...+..|.++.+.....
T Consensus 236 wlmLQq~~--PddyViA-Tg~t~sVrefv~~Af~~~g~~l~w~g~g~ 279 (345)
T COG1089 236 WLMLQQEE--PDDYVIA-TGETHSVREFVELAFEMVGIDLEWEGTGV 279 (345)
T ss_pred HHHHccCC--CCceEEe-cCceeeHHHHHHHHHHHcCceEEEeeccc
Confidence 99998875 4556665 56799999999999999998877664433
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-21 Score=176.39 Aligned_cols=192 Identities=18% Similarity=0.175 Sum_probs=140.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+||||+||||+++++.|+++|++|++++|+... ....+++++.+|+.|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-----------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA 68 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-----------ALDPRVDYVCASLRNPV-LQELAGEADAVIHLA 68 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-----------cccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence 589999999999999999999999999999987321 11357899999999985 788888999999999
Q ss_pred cchh-------hhhHHHHHHHHHHcCCccEEcc-CCC-CCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecc
Q 021596 85 GHAL-------LADQVKIIAAIKEAGNVTRFFP-SEF-GNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESY 155 (310)
Q Consensus 85 ~~~~-------~~~~~~~~~aa~~~~~v~~~v~-s~~-~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~ 155 (310)
+... +.++.|++++|++.| + ++|+ |+. |. + ..|. ..|.++..++++++++|+.
T Consensus 69 a~~~~~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~G~-------~-----~~~~----~aE~ll~~~~~p~~ILR~~ 130 (699)
T PRK12320 69 PVDTSAPGGVGITGLAHVANAAARAG-A-RLLFVSQAAGR-------P-----ELYR----QAETLVSTGWAPSLVIRIA 130 (699)
T ss_pred ccCccchhhHHHHHHHHHHHHHHHcC-C-eEEEEECCCCC-------C-----cccc----HHHHHHHhcCCCEEEEeCc
Confidence 8542 567899999999998 7 5666 542 21 1 1121 4778888888999999988
Q ss_pred eecccccccc-CCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHH
Q 021596 156 CFDGYFLPNL-LQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWER 234 (310)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~ 234 (310)
.++|...... .......+. . . ....++.++|++|++++++.+++.+. +++||+++++ .+|+.|+++.+..
T Consensus 131 nVYGp~~~~~~~r~I~~~l~-~----~-~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~~-~~Si~el~~~i~~ 201 (699)
T PRK12320 131 PPVGRQLDWMVCRTVATLLR-S----K-VSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATPD-TTNVVTAWRLLRS 201 (699)
T ss_pred eecCCCCcccHhHHHHHHHH-H----H-HcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCCC-eeEHHHHHHHHHH
Confidence 8877532110 000000000 0 0 11334567999999999999997643 4589998665 8999999998877
Q ss_pred H
Q 021596 235 K 235 (310)
Q Consensus 235 ~ 235 (310)
.
T Consensus 202 ~ 202 (699)
T PRK12320 202 V 202 (699)
T ss_pred h
Confidence 6
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=176.84 Aligned_cols=207 Identities=17% Similarity=0.184 Sum_probs=142.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|+||||||+||||++|++.|.++|++|... .+|++|.+.+...++ ++|+||
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~~pd~Vi 433 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNVKPTHVF 433 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence 4799999999999999999999999887311 135678888888777 799999
Q ss_pred Ecccchh------------------hhhHHHHHHHHHHcCCccEEccCC---CCC----------CccccCCCCCCcchh
Q 021596 82 STVGHAL------------------LADQVKIIAAIKEAGNVTRFFPSE---FGN----------DVDRAHGAVEPAKSV 130 (310)
Q Consensus 82 ~~a~~~~------------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~----------~~~~~~~~~~~~~~~ 130 (310)
|+|+... ..++.+++++|++.| ++++++|+ |+. +..+++ +..|+.+.
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~-~~~~~~~~ 511 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEED-KPNFTGSF 511 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcccccccCCCCCcCC-CCCCCCCh
Confidence 9998641 567899999999998 88777743 432 112222 33344578
Q ss_pred hHHHHHHHHHHHHHcCCCEEEEecceecccc---ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 131 YYDVKARIRRAVEAEGIPYTYVESYCFDGYF---LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 131 y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
||.+|+.+|++++.+ .++.++|+.++++.. ..++.... +........+ .+..+.+|++.++..+++..
T Consensus 512 Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~---~~~~~~~~vp-----~~~~~~~~~~~~~~~l~~~~ 582 (668)
T PLN02260 512 YSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKI---SRYNKVVNIP-----NSMTVLDELLPISIEMAKRN 582 (668)
T ss_pred hhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHH---hccceeeccC-----CCceehhhHHHHHHHHHHhC
Confidence 999999999999876 356677766555321 11222221 1112211111 24566777888778877643
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHH
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQL 250 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 250 (310)
.+++||+++++ .+|+.|+++.+.+.++....+..++.+++
T Consensus 583 --~~giyni~~~~-~~s~~e~a~~i~~~~~~~~~~~~~~~~~~ 622 (668)
T PLN02260 583 --LRGIWNFTNPG-VVSHNEILEMYKDYIDPGFKWSNFTLEEQ 622 (668)
T ss_pred --CCceEEecCCC-cCcHHHHHHHHHHhcCCcccccccCHHHh
Confidence 35899998766 89999999999998853333455665553
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.4e-20 Score=156.68 Aligned_cols=218 Identities=22% Similarity=0.235 Sum_probs=145.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++|+||||+|+||+++++.|+++|++|+++.|+ +++...+......++.++.+|++|.+++.++++ ++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRR-----PDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999998 333322222223468899999999998887764 48
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|+|||+++... +.++.++++++ ++.+ .+++|+ |+++... ..|....|+.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~~Y~~ 150 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQI------AYPGFSLYHA 150 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccc------CCCCCchhHH
Confidence 99999998642 44556677776 5555 678877 6654321 1234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-----EEEecCCCceeEeeccchHHHHHH
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-----VVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
+|+..+.+++. .+++++++||+.+..++................ ......+. ...+.+++|++++++
T Consensus 151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~a~~ 229 (276)
T PRK06482 151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS-FAIPGDPQKMVQAMI 229 (276)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc-CCCCCCHHHHHHHHH
Confidence 99999877753 589999999998755442221110000000000 00001111 112467899999999
Q ss_pred HHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 202 KAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
.++..+.. +..|++ +.++..+..|+++.+.+.++
T Consensus 230 ~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 230 ASADQTPA-PRRLTL-GSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHcCCCC-CeEEec-ChHHHHHHHHHHHHHHHHHH
Confidence 99976543 344555 45667788888777777664
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=133.40 Aligned_cols=193 Identities=22% Similarity=0.278 Sum_probs=138.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|||.|+||||.+|+++++..+++||+|++++|+++ |... .+++.+++.|+.|++++.+.+.|.|+||...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~-----K~~~-----~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~ 70 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNAS-----KLAA-----RQGVTILQKDIFDLTSLASDLAGHDAVISAF 70 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChH-----hccc-----cccceeecccccChhhhHhhhcCCceEEEec
Confidence 78999999999999999999999999999999943 3311 1688899999999999999999999999988
Q ss_pred cchh-------hhhHHHHHHHHHHcCCccEEcc-----CCCCCCcc-ccCCCCCCcchhhHHHHHHHH--HHHHH-cCCC
Q 021596 85 GHAL-------LADQVKIIAAIKEAGNVTRFFP-----SEFGNDVD-RAHGAVEPAKSVYYDVKARIR--RAVEA-EGIP 148 (310)
Q Consensus 85 ~~~~-------~~~~~~~~~aa~~~~~v~~~v~-----s~~~~~~~-~~~~~~~~~~~~y~~~K~~~e--~~l~~-~~~~ 148 (310)
+... ......++++.+..+ ++|++- |-+-.... ..+.|..| ..+|..++...| +.|+. ..++
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP-~ey~~~A~~~ae~L~~Lr~~~~l~ 148 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFP-AEYKPEALAQAEFLDSLRAEKSLD 148 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCc-hhHHHHHHHHHHHHHHHhhccCcc
Confidence 7662 344556888888888 888654 22322222 23323333 556666666666 45554 4699
Q ss_pred EEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEE
Q 021596 149 YTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216 (310)
Q Consensus 149 ~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 216 (310)
||++.|..++.+.-. -.+ +.+.+..+..-..|+ ++|+..|.|.+++..+++|.+.++.+-+
T Consensus 149 WTfvSPaa~f~PGer-Tg~---yrlggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~~h~rqRftv 209 (211)
T COG2910 149 WTFVSPAAFFEPGER-TGN---YRLGGDQLLVNAKGE---SRISYADYAIAVLDELEKPQHIRQRFTV 209 (211)
T ss_pred eEEeCcHHhcCCccc-cCc---eEeccceEEEcCCCc---eeeeHHHHHHHHHHHHhcccccceeeee
Confidence 999999888765221 111 113333333333343 8999999999999999999887776554
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=153.33 Aligned_cols=221 Identities=16% Similarity=0.154 Sum_probs=144.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
+++|+||||+|+||+++++.|+++|++|++++|+ +++.+.+.......+.++++|++|.+++.++++ +
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARD-----TATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGR 77 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 333322222223457888999999999877665 5
Q ss_pred CCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||++|... +.++ ..++..+++.+ .+++|+ |+.+... ..+....|+
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~~~~~Y~ 150 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGIS------AFPMSGIYH 150 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcC------CCCCccHHH
Confidence 799999998643 2223 33444456666 667776 5433221 122356899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEe-eccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVY-NKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-i~~~D~a~~~~~~ 203 (310)
.+|+..+.+.+. .|++++++|||.+..................... ...........+ ++++|+|++++.+
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l 230 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKL 230 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 999998776642 5899999999988765442111100000000000 001111122345 8899999999999
Q ss_pred hcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 204 VDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 204 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
++.+...++ +++.+..+.++..++.+.+.+..+
T Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 231 VDAENPPLR-LFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HcCCCCCeE-EEeCchHHHHHHHHHHHHHHHHHH
Confidence 987765544 444333357888999998888643
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=148.62 Aligned_cols=210 Identities=16% Similarity=0.142 Sum_probs=138.9
Q ss_pred CCCC--ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MASK--SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~~--~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|++| ++++||||+|+||+++++.|+++|++|++++|+.... .......+.. ..+.++.+|+.|++++.++++
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVAEIEAAGGRASAVGADLTDEESVAALMDT 77 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 5443 7899999999999999999999999999999974211 1112222322 346789999999999887775
Q ss_pred ------CCCEEEEcccchh-------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 ------QVDVVISTVGHAL-------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
++|+|||+++... ..++.++++++.+.- +..++|+ |+.+....... ...|....|+.+
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-~~~~~~~~Y~~s 156 (248)
T PRK07806 78 AREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV-KTMPEYEPVARS 156 (248)
T ss_pred HHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc-cCCccccHHHHH
Confidence 5899999997532 556778888888641 1236665 55332211111 112335689999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|..+|.+++. .++++++++|+.+.+.+...+.... ..+ .. .........+++++|+|++++.+++.+
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~-~~--~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL---NPG-AI--EARREAAGKLYTVSEFAAEVARAVTAP 230 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC---CHH-HH--HHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence 9999988865 4788888888877655433221110 000 00 000001136899999999999999876
Q ss_pred ccCCceEEEcCCC
Q 021596 208 RTLNKNLYIQPPG 220 (310)
Q Consensus 208 ~~~~~~~~~~~~~ 220 (310)
...++++++.+++
T Consensus 231 ~~~g~~~~i~~~~ 243 (248)
T PRK07806 231 VPSGHIEYVGGAD 243 (248)
T ss_pred ccCccEEEecCcc
Confidence 5567888887554
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-20 Score=153.14 Aligned_cols=189 Identities=17% Similarity=0.205 Sum_probs=107.4
Q ss_pred EEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHh------------hhcCCcEEEEccCCCH------H
Q 021596 9 SIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDH------------FKNLGVNFVVGDVLNH------E 68 (310)
Q Consensus 9 I~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~------------l~~~~~~~v~~D~~d~------~ 68 (310)
|||||||+|+++++.|++++. +|+++.|..+... ......+. .....++++.||++++ +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~-~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQS-ALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHH-HHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccccc-chhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 799999999999999999986 8999999853310 01111111 1256899999999874 5
Q ss_pred HHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC-CCC--Ccc----------c--c
Q 021596 69 SLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE-FGN--DVD----------R--A 120 (310)
Q Consensus 69 ~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~-~~~--~~~----------~--~ 120 (310)
.+..+.+.+|+|||+|+... +.++.++++.|.+.+ .++|++ |+ +.. ... . .
T Consensus 80 ~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~ 158 (249)
T PF07993_consen 80 DYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL 158 (249)
T ss_dssp HHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred HhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccc
Confidence 67777789999999998765 889999999999766 568777 43 111 110 0 1
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHc----CCCEEEEecceeccccccccCCCCC-------CCCCCCeEE-EecCCCcee
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEAE----GIPYTYVESYCFDGYFLPNLLQPGA-------AAPPRDKVV-ILGDGNPKA 188 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~~----~~~~~i~rp~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~ 188 (310)
. ......+.|..||+.+|+++++. |++++|+||+.+.+.-.+....... .....+..+ ..+.++...
T Consensus 159 ~-~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 237 (249)
T PF07993_consen 159 D-PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARL 237 (249)
T ss_dssp E---TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT-
T ss_pred h-hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceE
Confidence 1 12234578999999999999752 8999999999999843322221100 001111222 334445568
Q ss_pred EeeccchHHHHH
Q 021596 189 VYNKEDDIATYT 200 (310)
Q Consensus 189 ~~i~~~D~a~~~ 200 (310)
++++++.+|++|
T Consensus 238 d~vPVD~va~aI 249 (249)
T PF07993_consen 238 DLVPVDYVARAI 249 (249)
T ss_dssp -EEEHHHHHHHH
T ss_pred eEECHHHHHhhC
Confidence 999999999875
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=147.04 Aligned_cols=206 Identities=16% Similarity=0.177 Sum_probs=133.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|.++++|+||||+|+||+++++.|+++|++|++++|+ +.+...+......++..+.+|+.|.+++.++++
T Consensus 1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 75 (277)
T PRK06180 1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS-----EAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT 75 (277)
T ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC-----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence 5556899999999999999999999999999999998 333322222223457889999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... +.++.++++++ ++.+ ..++|+ |+.+... + .|+..
T Consensus 76 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~-----~-~~~~~ 148 (277)
T PRK06180 76 FGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLI-----T-MPGIG 148 (277)
T ss_pred hCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccC-----C-CCCcc
Confidence 4899999998742 33445566654 3444 567776 5543221 1 23467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCC-Ce-EEEe---cCCCceeEeeccchHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPR-DK-VVIL---GDGNPKAVYNKEDDIA 197 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~-~~-~~~~---~~~~~~~~~i~~~D~a 197 (310)
.|+.+|..++.+.+. .|+++++++|+.+..++.............. .. .... ........+.+++|+|
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 228 (277)
T PRK06180 149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAA 228 (277)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHH
Confidence 899999998877653 4899999999998765432111100000000 00 0000 0000112467899999
Q ss_pred HHHHHHhcCCccCCceEEEcCCC
Q 021596 198 TYTIKAVDDPRTLNKNLYIQPPG 220 (310)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~~~ 220 (310)
+++..+++.+... ..++.++.
T Consensus 229 ~~~~~~l~~~~~~--~~~~~g~~ 249 (277)
T PRK06180 229 QAILAAVESDEPP--LHLLLGSD 249 (277)
T ss_pred HHHHHHHcCCCCC--eeEeccHH
Confidence 9999999876432 34555444
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=145.66 Aligned_cols=206 Identities=16% Similarity=0.160 Sum_probs=135.7
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|...++|+||||+|++|++++++|+++|++|+++.|+.+.. ......+. ...++++.+|+.|.+++.++++
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA----AAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAV 76 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 33457999999999999999999999999999999984321 11122232 2457889999999999888776
Q ss_pred ----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||+++... ......++.++++.+ .+++|+ |+..... ..+.
T Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~------~~~~ 149 (258)
T PRK12429 77 ETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLV------GSAG 149 (258)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhcc------CCCC
Confidence 5899999998532 122455666667766 788887 4432221 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC--CCCCe--EEEecCCCceeEeeccchH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA--PPRDK--VVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~i~~~D~ 196 (310)
.+.|+.+|...+.+.+. .++++..++|+.+.+............. ..... ...+........+++++|+
T Consensus 150 ~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 229 (258)
T PRK12429 150 KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEI 229 (258)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHH
Confidence 57898999988766642 4788999999998876543211110000 00000 0011112233579999999
Q ss_pred HHHHHHHhcCCc--cCCceEEEc
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
|+++..++.... ..++.|++.
T Consensus 230 a~~~~~l~~~~~~~~~g~~~~~~ 252 (258)
T PRK12429 230 ADYALFLASFAAKGVTGQAWVVD 252 (258)
T ss_pred HHHHHHHcCccccCccCCeEEeC
Confidence 999999986542 236666664
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=143.60 Aligned_cols=198 Identities=17% Similarity=0.191 Sum_probs=133.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||||++|++++++|+++|++|+++.|+.... .......+. ..++.++.+|+.|.+++.++++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA---AEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999998888874321 111112221 3458899999999999888775
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+..++++++ ++.+ .+++|+ |+.+.... .+....
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~------~~~~~~ 155 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPG------WPGRSN 155 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCC------CCCchH
Confidence 5799999998432 22334445554 5666 788887 54433211 123567
Q ss_pred hHHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+++ ..+++++++||+.+.++......... .... .. ......+++++|+++++..+
T Consensus 156 y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~---~~--~~~~~~~~~~~dva~~~~~~ 227 (249)
T PRK12825 156 YAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REAK---DA--ETPLGRSGTPEDIARAVAFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHhh---hc--cCCCCCCcCHHHHHHHHHHH
Confidence 9999998876664 25899999999999987654332111 0000 00 11122489999999999999
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.++. ..|+.|++.+.
T Consensus 228 ~~~~~~~~~g~~~~i~~g 245 (249)
T PRK12825 228 CSDASDYITGQVIEVTGG 245 (249)
T ss_pred hCccccCcCCCEEEeCCC
Confidence 96642 35788888743
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-18 Score=173.13 Aligned_cols=246 Identities=15% Similarity=0.181 Sum_probs=164.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC----CCEEEEEcCCCCCCCchhhHhHhhh---------cCCcEEEEccCC-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFK---------NLGVNFVVGDVL----- 65 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l~---------~~~~~~v~~D~~----- 65 (310)
.++|+|||||||+|+++++.|++++ ++|+++.|+.+.. .........+. ...++++.+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE-AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH-HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 4789999999999999999999887 7899999974332 11111101010 136889999996
Q ss_pred -CHHHHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC------------
Q 021596 66 -NHESLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND------------ 116 (310)
Q Consensus 66 -d~~~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~------------ 116 (310)
+.+.+..+..++|+|||+|+... +.++.+++++|++.+ +++|++ |+ |+..
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~ 1128 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQA 1128 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhc
Confidence 44667777789999999998643 667899999999887 888887 44 3210
Q ss_pred ----ccccCC---CCCCcchhhHHHHHHHHHHHHH---cCCCEEEEecceeccccccccCCCC-C--CCCCC-CeEEEec
Q 021596 117 ----VDRAHG---AVEPAKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGYFLPNLLQPG-A--AAPPR-DKVVILG 182 (310)
Q Consensus 117 ----~~~~~~---~~~~~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~~ 182 (310)
..+... ........|+.+|+.+|+++.. .|++++++||+.++|.......... + ..... ......+
T Consensus 1129 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p 1208 (1389)
T TIGR03443 1129 GGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIP 1208 (1389)
T ss_pred cCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcC
Confidence 000000 0011235699999999999865 4899999999998875322111000 0 00000 0112223
Q ss_pred CCCceeEeeccchHHHHHHHHhcCCcc--CCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHH
Q 021596 183 DGNPKAVYNKEDDIATYTIKAVDDPRT--LNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQ 255 (310)
Q Consensus 183 ~~~~~~~~i~~~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 255 (310)
.....++|++++|++++++.++..+.. .+.+||+.++ ..+++.++++.+.+. |.+.+ .++..+|...+.
T Consensus 1209 ~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~-g~~~~--~~~~~~w~~~l~ 1279 (1389)
T TIGR03443 1209 NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-PRIRFNDFLGTLKTY-GYDVE--IVDYVHWRKSLE 1279 (1389)
T ss_pred CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-CCCcHHHHHHHHHHh-CCCCC--ccCHHHHHHHHH
Confidence 345568999999999999999876532 3357788654 479999999999764 66544 466777766554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.6e-18 Score=144.09 Aligned_cols=189 Identities=17% Similarity=0.179 Sum_probs=127.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
+++|+||||+|+||+++++.|+++|++|+++.|+ +++. +.+...+++++.+|++|.+++.++++ +
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~l---~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARR-----VDKM---EDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999998 3333 23334578999999999999988876 6
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||++|... ...+..++..+++.+ ..++|+ |+.+... ..|....|+
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 147 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKI------YTPLGAWYH 147 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcC------CCCCccHhH
Confidence 899999998642 122456666777776 677777 5543221 122345799
Q ss_pred HHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEE--------EecCCCceeEeeccchHH
Q 021596 133 DVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV--------ILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 133 ~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~~~D~a 197 (310)
.+|...+.+.+ ..++++++++||.+..++.................. .+........+.+++|+|
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA 227 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIA 227 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHH
Confidence 99999988753 258999999999997764321111100000000000 000001123466888888
Q ss_pred HHHHHHhcCC
Q 021596 198 TYTIKAVDDP 207 (310)
Q Consensus 198 ~~~~~~l~~~ 207 (310)
++++.++...
T Consensus 228 ~~i~~~~~~~ 237 (273)
T PRK06182 228 DAISKAVTAR 237 (273)
T ss_pred HHHHHHHhCC
Confidence 8888888754
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=143.70 Aligned_cols=203 Identities=14% Similarity=0.152 Sum_probs=135.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++++||||+|+||+++++.|+++|++|+++.|+.+.. ....+.+.. ..+.++++|++|.+++.++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA----NAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH----HHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999984321 122233332 236778999999999887776
Q ss_pred -CCCEEEEcccchh-------------------hhh----HHHHHHHH-HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-------------------LAD----QVKIIAAI-KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa-~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... +.+ +.++++++ +..+ .+++|+ |+..... ..+...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~------~~~~~~ 155 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHE------ASPLKS 155 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcC------CCCCCc
Confidence 3899999998642 122 55677777 6655 788887 5533221 122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCC--CC-C-eEEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAP--PR-D-KVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|...+.+++. .+++++.+||+.+.+.............. .. . ...++..+....+|++++|+++
T Consensus 156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 235 (262)
T PRK13394 156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ 235 (262)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 799999998877653 47889999999888764322111100000 00 0 0011222344568999999999
Q ss_pred HHHHHhcCCcc--CCceEEEc
Q 021596 199 YTIKAVDDPRT--LNKNLYIQ 217 (310)
Q Consensus 199 ~~~~~l~~~~~--~~~~~~~~ 217 (310)
++..++..+.. .|+.|++.
T Consensus 236 a~~~l~~~~~~~~~g~~~~~~ 256 (262)
T PRK13394 236 TVLFLSSFPSAALTGQSFVVS 256 (262)
T ss_pred HHHHHcCccccCCcCCEEeeC
Confidence 99999975432 25556554
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.7e-18 Score=142.52 Aligned_cols=202 Identities=19% Similarity=0.246 Sum_probs=130.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
+++|+||||+|++|+++++.|+++|++|++++|+.. +.+ ....+. ...+.++.+|+.|.+++.++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEA-----GAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999832 222 222222 2357889999999997665543
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... ..++..++++ +++.+ ++++|+ |+..... ..+...
T Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~------~~~~~~ 148 (255)
T TIGR01963 76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLV------ASPFKS 148 (255)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcC------CCCCCc
Confidence 5899999997532 2222334444 45666 778877 4322111 112346
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC--CCCCeE--EEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA--PPRDKV--VILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|...+.+.+. .+++++.+||+.+++............. ...... .....+....++++++|+|+
T Consensus 149 ~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 228 (255)
T TIGR01963 149 AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAE 228 (255)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHH
Confidence 788999988877653 4789999999998876432211100000 000000 00112344567999999999
Q ss_pred HHHHHhcCCc--cCCceEEEc
Q 021596 199 YTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~ 217 (310)
+++.++.++. ..++.|++.
T Consensus 229 ~~~~~~~~~~~~~~g~~~~~~ 249 (255)
T TIGR01963 229 TALFLASDAAAGITGQAIVLD 249 (255)
T ss_pred HHHHHcCccccCccceEEEEc
Confidence 9999997642 245667775
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-18 Score=143.25 Aligned_cols=210 Identities=18% Similarity=0.169 Sum_probs=140.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
++++||||+|+||+++++.|+++|++|++++|+.. +.+ ..+.+....++++.+|+.|.+++..+++ +
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAA-----ALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999832 221 2223333457889999999999987776 4
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+++... ..+..++++++ .+.+ ..++++ |+..... . .....|+
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~--~~~~~y~ 149 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMA-----A--LGHPAYS 149 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcC-----C--CCCcccH
Confidence 899999998542 22333444444 4445 567776 4432111 1 1234799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE-ecCCCceeEeeccchHHHHHHHHh
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI-LGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|...+.+++. .++++..++|+++.+........ ....... ........++++++|+++++..++
T Consensus 150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------ANPQVFEELKKWYPLQDFATPDDVANAVLFLA 223 (257)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999998877754 37889999999887654221100 0000000 001123357999999999999999
Q ss_pred cCC-cc-CCceEEEcCCCCccCHHHHHHHHHH
Q 021596 205 DDP-RT-LNKNLYIQPPGNIYSFNDLVSLWER 234 (310)
Q Consensus 205 ~~~-~~-~~~~~~~~~~~~~~s~~e~~~~~~~ 234 (310)
.+. .. .|..+++. ++...+.+|+.+.+.+
T Consensus 224 ~~~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 224 SPAARAITGVCLPVD-GGLTAGNREMARTLTL 254 (257)
T ss_pred CchhcCcCCcEEEeC-CCcCcCChhhhhhhcc
Confidence 653 22 35555554 5668889999988764
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=141.59 Aligned_cols=216 Identities=13% Similarity=0.192 Sum_probs=142.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... ......+. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKL----AAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 37999999999999999999999999999999983211 11112222 1357888999999998888776
Q ss_pred ---CCCEEEEcccchh--------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL--------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+++... ..+...+++++.+ .+ ..++++ |+.... ...|.
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~------~~~~~ 155 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAAS------NTHRW 155 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhc------CCCCC
Confidence 6899999998431 2333445554443 33 346666 443321 11233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|...+.+++. .+++++.++|+.+...+...... .... ...........+++++|+|++
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~ 228 (276)
T PRK05875 156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-------SPELSADYRACTPLPRVGEVEDVANL 228 (276)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-------CHHHHHHHHcCCCCCCCcCHHHHHHH
Confidence 57899999999988864 36889999999886654322111 0000 000001112346789999999
Q ss_pred HHHHhcCCcc--CCceEEEcCCCCcc----CHHHHHHHHHHHhCC
Q 021596 200 TIKAVDDPRT--LNKNLYIQPPGNIY----SFNDLVSLWERKIGK 238 (310)
Q Consensus 200 ~~~~l~~~~~--~~~~~~~~~~~~~~----s~~e~~~~~~~~~g~ 238 (310)
+..++.++.. .++.+++.+ +..+ +..|+++.+.+..|.
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 229 AMFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HHHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHHH
Confidence 9999977543 367788864 4455 777877777766554
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-17 Score=139.08 Aligned_cols=216 Identities=13% Similarity=0.100 Sum_probs=141.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
+++|+||||||.||+++++.|+++|++|+++.|+ +++.+.. +.+ ..++++.+|+.|++++.++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLD-----EALAKETAAEL--GLVVGGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh--ccceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 3333211 111 247889999999998776664
Q ss_pred CCCEEEEcccchh-------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||++|... + .....++..+++.+ ..++|. |+..... ..+....|
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y 150 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKI------PVPGMATY 150 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccC------CCCCCcch
Confidence 5799999998632 1 22334555566666 677776 5543221 12345679
Q ss_pred HHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+ ..|+++++++|+++...+..... ......+++++|+|+.++.++
T Consensus 151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~~~~~va~~~~~~l 213 (273)
T PRK07825 151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----------------GAKGFKNVEPEDVAAAIVGTV 213 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----------------cccCCCCCCHHHHHHHHHHHH
Confidence 999988765543 35899999999988665432110 011235789999999999999
Q ss_pred cCCccCCceEEEcC---C---CCccCHHHHHHHHHHHhCCCceeeecCHHHHHHH
Q 021596 205 DDPRTLNKNLYIQP---P---GNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKN 253 (310)
Q Consensus 205 ~~~~~~~~~~~~~~---~---~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 253 (310)
.+++.. ..+.. . -..+....+.+.+.+..+....+...+.++..+.
T Consensus 214 ~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (273)
T PRK07825 214 AKPRPE---VRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAY 265 (273)
T ss_pred hCCCCE---EeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceeechhhHHHHHH
Confidence 876421 11100 0 0123335666677777776655555555544333
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=139.83 Aligned_cols=146 Identities=18% Similarity=0.190 Sum_probs=108.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-h--hcCCcEEEEccCCCHHHHHHHhc-CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KNLGVNFVVGDVLNHESLVNAIK-QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l--~~~~~~~v~~D~~d~~~~~~~~~-~~d~V 80 (310)
++|+||||+|+||+++++.|+++|++|++++|+.. +...+.. . ...++.++.+|+.|++++..++. ++|+|
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~v 77 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAP-----QVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVL 77 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEE
Confidence 68999999999999999999999999999999832 2211111 1 12358899999999999999887 89999
Q ss_pred EEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+++... ......+++++++.+ .+++|+ |+.+... ..+....|+.+|.
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~------~~~~~~~Y~~sK~ 150 (257)
T PRK09291 78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLI------TGPFTGAYCASKH 150 (257)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhcc------CCCCcchhHHHHH
Confidence 99998532 122344566666776 678877 5543221 1233568999999
Q ss_pred HHHHHHH-------HcCCCEEEEecceeccccc
Q 021596 137 RIRRAVE-------AEGIPYTYVESYCFDGYFL 162 (310)
Q Consensus 137 ~~e~~l~-------~~~~~~~i~rp~~~~~~~~ 162 (310)
.++.+.+ ..|++++++|||++..++.
T Consensus 151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~ 183 (257)
T PRK09291 151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN 183 (257)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence 9987654 3689999999999877653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=138.59 Aligned_cols=198 Identities=18% Similarity=0.127 Sum_probs=131.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|++|.++++.|+++|++|++++|+.+.. ......+.. ..+.++.+|+.|.+++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA----AATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999984321 112223322 347889999999999988886
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+..++++++ .+.+ .+++|+ |+.+... ...+....
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~-----~~~~~~~~ 155 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPR-----VGYPGLAH 155 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhc-----cCCCCccH
Confidence 6899999997643 22334555555 3445 677776 4433220 11223567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|..++.+++. .+++++++||+.+.++......... . ............+++++|+|.++..+
T Consensus 156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~dva~~~~~l 228 (251)
T PRK12826 156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ---W----AEAIAAAIPLGRLGEPEDIAAAVLFL 228 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH---H----HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999988877753 4789999999999876433221100 0 00000011112578999999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+..+. ..|+.+++.+
T Consensus 229 ~~~~~~~~~g~~~~~~~ 245 (251)
T PRK12826 229 ASDEARYITGQTLPVDG 245 (251)
T ss_pred hCccccCcCCcEEEECC
Confidence 86542 2467777753
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=139.29 Aligned_cols=146 Identities=22% Similarity=0.284 Sum_probs=109.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|+.+++|+||||+|+||+++++.|+++|++|++++|+.... . ...+++++++|+.|++++.++++
T Consensus 1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~--------~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 70 (270)
T PRK06179 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA--------A--PIPGVELLELDVTDDASVQAAVDEVIAR 70 (270)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------c--ccCCCeeEEeecCCHHHHHHHHHHHHHh
Confidence 66668999999999999999999999999999999984321 1 13468899999999999998887
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHH----HHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKII----AAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~----~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||++|... ..++.+++ +.+++.+ ..++|. |+.... ...|...
T Consensus 71 ~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~------~~~~~~~ 143 (270)
T PRK06179 71 AGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGF------LPAPYMA 143 (270)
T ss_pred CCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCcccc------CCCCCcc
Confidence 4799999998642 22333344 4456666 778777 443221 1123456
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceecccccc
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~ 163 (310)
.|+.+|...+.+++. .|+++++++|+++.+++..
T Consensus 144 ~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~ 184 (270)
T PRK06179 144 LYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA 184 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence 899999999877653 5899999999998876543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=139.72 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=112.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|.++++|+||||+|+||+++++.|.++|++|++++|+ +++. +.+...+++++.+|+.|.+++.++++
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~-----~~~~---~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 72 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRK-----EEDV---AALEAEGLEAFQLDYAEPESIAALVAQVLEL 72 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 6656799999999999999999999999999999998 3333 33444578999999999998877765
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ...+.++++++++.+ ..++|+ |+.... ...+..
T Consensus 73 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~------~~~~~~ 145 (277)
T PRK05993 73 SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGL------VPMKYR 145 (277)
T ss_pred cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhc------CCCCcc
Confidence 4799999997542 122566788888877 678877 443221 112335
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL 162 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~ 162 (310)
..|+.+|+.++.+.+. .|+++++++||.+...+.
T Consensus 146 ~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~ 186 (277)
T PRK05993 146 GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186 (277)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence 7899999999987643 589999999998876543
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6e-17 Score=133.84 Aligned_cols=188 Identities=16% Similarity=0.144 Sum_probs=130.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|++++|+..+. .+....+...+++++.+|+.|.+++.++++ +
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL----SQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH----HHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999999999984321 112233445578889999999998887776 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+++... ..++.++++++ ++.+ ++++|+ |+.+... + .+....|+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~-~~~~~~y~ 155 (239)
T PRK12828 83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALK-----A-GPGMGAYA 155 (239)
T ss_pred cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhcc-----C-CCCcchhH
Confidence 899999998531 22344555555 3455 778877 5543221 1 12356788
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+++. .++++..+||+.+.+....... +. .....+++++|+|+++..++.
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~--------------~~--~~~~~~~~~~dva~~~~~~l~ 219 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM--------------PD--ADFSRWVTPEQIAAVIAFLLS 219 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC--------------Cc--hhhhcCCCHHHHHHHHHHHhC
Confidence 999887766643 4799999999988776322110 00 011247999999999999997
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
++. ..|+.+.+.+
T Consensus 220 ~~~~~~~g~~~~~~g 234 (239)
T PRK12828 220 DEAQAITGASIPVDG 234 (239)
T ss_pred cccccccceEEEecC
Confidence 642 2366666654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=139.50 Aligned_cols=199 Identities=16% Similarity=0.191 Sum_probs=127.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
+++++||||+|++|+++++.|+++|++|++++|+.+ +.+.. .... ...++++.+|+.|++++.+ ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~ 76 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPE-----KQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVL 76 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHH-----HHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHH
Confidence 467999999999999999999999999999999843 22111 1111 1357889999999988765 43
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|+|+++... ..++.+++++ +++.+ ..++|+ |+.+... ..+.
T Consensus 77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~~ 149 (280)
T PRK06914 77 KEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRV------GFPG 149 (280)
T ss_pred HhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccC------CCCC
Confidence 5799999998532 2233444444 45555 677776 4432221 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-E-E----ecC-CCceeEeecc
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-V-I----LGD-GNPKAVYNKE 193 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~-~----~~~-~~~~~~~i~~ 193 (310)
...|+.+|...+.+++. .+++++++|||.+.++.................. . . ... ......++++
T Consensus 150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (280)
T PRK06914 150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNP 229 (280)
T ss_pred CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCH
Confidence 56899999998887753 4899999999998876432211110000000000 0 0 000 0112357889
Q ss_pred chHHHHHHHHhcCCccCCceEEE
Q 021596 194 DDIATYTIKAVDDPRTLNKNLYI 216 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~~ 216 (310)
+|+|++++.++++++.. ..|++
T Consensus 230 ~dva~~~~~~~~~~~~~-~~~~~ 251 (280)
T PRK06914 230 IDVANLIVEIAESKRPK-LRYPI 251 (280)
T ss_pred HHHHHHHHHHHcCCCCC-ccccc
Confidence 99999999999887543 34444
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=136.38 Aligned_cols=198 Identities=15% Similarity=0.171 Sum_probs=130.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh-cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~-~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|++|++++++|+++|++|++++|+.. +.. ....+. ...+.++.+|+.|++++..+++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEE-----AAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999842 221 112222 2347889999999999988775
Q ss_pred -CCCEEEEcccchh--------------------hh----hHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL--------------------LA----DQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~----~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... .. ....+++++.+.+ .++||+ |+.+... ..+...
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~ 152 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLR------PRPGLG 152 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcC------CCCCch
Confidence 5799999998632 12 2344445555555 677776 5544321 122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .+++++.++||++...+........ ....... .........+++++|+|.+++.
T Consensus 153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~dva~~~~~ 228 (251)
T PRK07231 153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP---TPENRAK-FLATIPLGRLGTPEDIANAALF 228 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc---ChHHHHH-HhcCCCCCCCcCHHHHHHHHHH
Confidence 799999998876653 3789999999998776543322110 0000000 0111122457899999999999
Q ss_pred HhcCCc-c-CCceEEEc
Q 021596 203 AVDDPR-T-LNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~-~-~~~~~~~~ 217 (310)
++.++. . .|..+.+.
T Consensus 229 l~~~~~~~~~g~~~~~~ 245 (251)
T PRK07231 229 LASDEASWITGVTLVVD 245 (251)
T ss_pred HhCccccCCCCCeEEEC
Confidence 996543 2 24445553
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-17 Score=136.24 Aligned_cols=154 Identities=16% Similarity=0.224 Sum_probs=113.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHh---------hhcCCcEEEEccCC------CHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDH---------FKNLGVNFVVGDVL------NHE 68 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~---------l~~~~~~~v~~D~~------d~~ 68 (310)
++|++||||||+|.+++..|+.+-. +|++++|..+.. ..+..+.+. ....+++++.+|+. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E-~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDE-AALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHH-HHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 4799999999999999999998874 999999986532 112222222 22356899999998 456
Q ss_pred HHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCc-------cc--c--C---
Q 021596 69 SLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDV-------DR--A--H--- 121 (310)
Q Consensus 69 ~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~-------~~--~--~--- 121 (310)
.+.++.+.+|.|||+++... +.++..+++.|...+ .|.+++ |+.+... .. . .
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~ 158 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTR 158 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccccccccc
Confidence 77888888999999998654 889999999998865 887776 4322110 00 0 0
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEecceeccc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGY 160 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~ 160 (310)
.........|++||+.+|.++++ .|++++|+|||.+.+.
T Consensus 159 ~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 159 NVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGD 200 (382)
T ss_pred cccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeecc
Confidence 01223457899999999999986 4799999999999875
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.7e-17 Score=128.35 Aligned_cols=187 Identities=19% Similarity=0.222 Sum_probs=131.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.|.++|||||+.||.++++.|.+.|++|++..|+ .++.+.+ .++....+..+..|++|.+++.++++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR-----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARR-----EERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecc-----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 4679999999999999999999999999999999 4444332 22222357889999999988666554
Q ss_pred CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+++|+||... ...+..++-.+.+++ -.++|. ||.... -..|..+.|
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~------~~y~~~~vY 153 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGR------YPYPGGAVY 153 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEecccccc------ccCCCCccc
Confidence 6999999999764 333444555556665 457776 554433 223457899
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|+.+.++-+. .+++++.+.||.+.+..++...... ..... ..--.....+.++|+|++++.++
T Consensus 154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g------~~~~~-~~~y~~~~~l~p~dIA~~V~~~~ 226 (246)
T COG4221 154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG------DDERA-DKVYKGGTALTPEDIAEAVLFAA 226 (246)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc------hhhhH-HHHhccCCCCCHHHHHHHHHHHH
Confidence 9999998776542 4789999999999775544332221 00000 00001236889999999999999
Q ss_pred cCCcc
Q 021596 205 DDPRT 209 (310)
Q Consensus 205 ~~~~~ 209 (310)
+.|.+
T Consensus 227 ~~P~~ 231 (246)
T COG4221 227 TQPQH 231 (246)
T ss_pred hCCCc
Confidence 99864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5e-17 Score=135.69 Aligned_cols=197 Identities=11% Similarity=0.098 Sum_probs=126.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|+||+++++.|+++|++|.++ .|+.. ........+.. ..++++.+|++|.+++.++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ----AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 799999999999999999999999998775 56521 11122223322 347789999999999988776
Q ss_pred -------CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 -------QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||+++... ..++.++++++.+. ....++|+ |+..... + .+.
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~-----~-~~~ 156 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL-----G-FTG 156 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-----C-CCC
Confidence 4899999998642 33445566666542 11236665 4432211 1 123
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++++++|+.+.+......... ...............+++++|+|+++
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~ 230 (254)
T PRK12746 157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD------PEIRNFATNSSVFGRIGQVEDIADAV 230 (254)
T ss_pred CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC------hhHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 56799999999877542 478999999998876543221110 00000000111123567899999999
Q ss_pred HHHhcCCc--cCCceEEEc
Q 021596 201 IKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~ 217 (310)
..++.++. ..|+.|++.
T Consensus 231 ~~l~~~~~~~~~g~~~~i~ 249 (254)
T PRK12746 231 AFLASSDSRWVTGQIIDVS 249 (254)
T ss_pred HHHcCcccCCcCCCEEEeC
Confidence 88887542 246777775
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.6e-17 Score=134.45 Aligned_cols=185 Identities=17% Similarity=0.167 Sum_probs=124.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
|+|+||||+|++|.++++.|+++|++|++++|+ +.+.+.+.......+.++.+|+.|.+++.++++ ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999998 333322222223468889999999998887765 69
Q ss_pred CEEEEcccchh--------------------hh----hHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 78 DVVISTVGHAL--------------------LA----DQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 78 d~Vi~~a~~~~--------------------~~----~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
|+|||++|... .. .+.+++.++++.+ ..++|+ |+.+... + .+....|+
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~-~~~~~~Y~ 148 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW-----P-YAGGNVYG 148 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC-----C-CCCCchhH
Confidence 99999997531 11 2445566666666 677776 5533221 1 12356899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++.+..++||.+.+.......... ........+. ...++.++|+|+++..++.
T Consensus 149 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~dvA~~~~~l~~ 221 (248)
T PRK10538 149 ATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---DDGKAEKTYQ----NTVALTPEDVSEAVWWVAT 221 (248)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC---cHHHHHhhcc----ccCCCCHHHHHHHHHHHhc
Confidence 999999887753 4688999999988644321110000 0000000000 1245789999999999997
Q ss_pred CCc
Q 021596 206 DPR 208 (310)
Q Consensus 206 ~~~ 208 (310)
.+.
T Consensus 222 ~~~ 224 (248)
T PRK10538 222 LPA 224 (248)
T ss_pred CCC
Confidence 664
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=132.73 Aligned_cols=186 Identities=19% Similarity=0.187 Sum_probs=124.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
||+|+||||+|++|+++++.|+++ ++|+++.|+. .+.+.+.. ...+++++++|+.|.+++.++++ ++|+|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~-----~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 75 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPA-----ERLDELAA-ELPGATPFPVDLTDPEAIAAAVEQLGRLDVL 75 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCH-----HHHHHHHH-HhccceEEecCCCCHHHHHHHHHhcCCCCEE
Confidence 579999999999999999999999 9999999983 23221111 12468899999999999999887 59999
Q ss_pred EEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+++... .....++++++++.+ .++|+ |+..... ..+....|+.+|.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~------~~~~~~~y~~~K~ 147 (227)
T PRK08219 76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLR------ANPGWGSYAASKF 147 (227)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcC------cCCCCchHHHHHH
Confidence 99998632 112445556665554 45555 4422211 1123467999999
Q ss_pred HHHHHHHH-----cC-CCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC
Q 021596 137 RIRRAVEA-----EG-IPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210 (310)
Q Consensus 137 ~~e~~l~~-----~~-~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 210 (310)
..+.+++. .+ +++..++|+.+.+.....+.. .. +.......+++++|+|++++.+++.+. .
T Consensus 148 a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~dva~~~~~~l~~~~-~ 214 (227)
T PRK08219 148 ALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA-------QE-----GGEYDPERYLRPETVAKAVRFAVDAPP-D 214 (227)
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh-------hh-----ccccCCCCCCCHHHHHHHHHHHHcCCC-C
Confidence 98877653 24 788888888665432221111 00 000112468999999999999998764 3
Q ss_pred CceEEEc
Q 021596 211 NKNLYIQ 217 (310)
Q Consensus 211 ~~~~~~~ 217 (310)
+.++++.
T Consensus 215 ~~~~~~~ 221 (227)
T PRK08219 215 AHITEVV 221 (227)
T ss_pred CccceEE
Confidence 4444543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-17 Score=135.79 Aligned_cols=197 Identities=14% Similarity=0.111 Sum_probs=129.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
+++++||||+|+||+++++.|+++|++|+++ .|+.. +. +..+.+. ...+.++.+|+.|++++.++++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRK-----AAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999999998764 66632 21 1222232 2347788999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..++.++++++. +.+ .+++|+ |+.+... ..+..
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~------~~~~~ 151 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIR------YLENY 151 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcc------CCCCc
Confidence 4899999998532 223344555554 344 568887 5543321 12235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|..++.+++. .+++++.++|+.+.......+... ...............+++++|+|+++.
T Consensus 152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~ 225 (250)
T PRK08063 152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR------EELLEDARAKTPAGRMVEPEDVANAVL 225 (250)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc------hHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 6899999999988753 578999999999877643322110 000000000001124788999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.++. ..|+.+++.+
T Consensus 226 ~~~~~~~~~~~g~~~~~~g 244 (250)
T PRK08063 226 FLCSPEADMIRGQTIIVDG 244 (250)
T ss_pred HHcCchhcCccCCEEEECC
Confidence 9987643 2466666654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=136.47 Aligned_cols=199 Identities=15% Similarity=0.123 Sum_probs=126.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|++|++++++|+++|++|+++.|+.... .......+. ...+.++.+|++|.+++..+++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAE---ADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999873211 111111221 2357889999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|+|||+++... ..++.++++++... .+-..++. ++... . ...++...|+
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~Y~ 157 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----E-RPLKGYPVYC 157 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----c-CCCCCchhHH
Confidence 4799999998521 55567788887542 10123433 22111 1 1223467899
Q ss_pred HHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 133 DVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 133 ~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
.+|..+|.+++. .+++++.+||+.+.+......... ..... . . .......+.+++|+++++..++.+
T Consensus 158 ~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~----~~~~~-~-~-~~~~~~~~~~~~d~a~~~~~~~~~ 230 (249)
T PRK09135 158 AAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDE----EARQA-I-L-ARTPLKRIGTPEDIAEAVRFLLAD 230 (249)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCH----HHHHH-H-H-hcCCcCCCcCHHHHHHHHHHHcCc
Confidence 999999988864 258899999998876542211000 00000 0 0 001111234579999999766654
Q ss_pred C-ccCCceEEEcCC
Q 021596 207 P-RTLNKNLYIQPP 219 (310)
Q Consensus 207 ~-~~~~~~~~~~~~ 219 (310)
. ...|++|++.++
T Consensus 231 ~~~~~g~~~~i~~g 244 (249)
T PRK09135 231 ASFITGQILAVDGG 244 (249)
T ss_pred cccccCcEEEECCC
Confidence 3 335677777643
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-16 Score=134.67 Aligned_cols=201 Identities=11% Similarity=0.094 Sum_probs=129.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++||||||+|+||+++++.|+++|++|+++.|+... .......+.. ..+.++.+|+.|.+++.++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA----LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999997322 1122233332 246779999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCC-----ccEEcc-CCCCCCccccCCCCC
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGN-----VTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~-----v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|+|||+||... ..++.+++++ +.+.+. ..++|+ |+.+... + .
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~-~ 155 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL-----A-P 155 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-----C-C
Confidence 4799999998743 2223343333 454441 146666 4432221 1 1
Q ss_pred CcchhhHHHHHHHHHHHHH----c-----CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 126 PAKSVYYDVKARIRRAVEA----E-----GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~----~-----~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
+....|+.+|...+.+.+. . ++++..+.|+++...+... ...++..+.+++...+++++++|.
T Consensus 156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T PRK06194 156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS--------ERNRPADLANTAPPTRSQLIAQAM 227 (287)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc--------cccCchhcccCccccchhhHHHHH
Confidence 2356899999999888753 2 2445555665554432211 223344555666667778888777
Q ss_pred HHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
...+... . .++..|+++.+.+.+...
T Consensus 228 ~~~~~~~----------------~-~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 228 SQKAVGS----------------G-KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHhhhhc----------------c-CCCHHHHHHHHHHHHHcC
Confidence 6654211 1 167888888888877544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-16 Score=132.75 Aligned_cols=217 Identities=20% Similarity=0.170 Sum_probs=137.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.+. ..+..+.+... .+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~----l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG----LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999988321 12222334332 36778999999999988775
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||++|... +.+..++++++. +.+...++|+ ||.... ...+....
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~------~~~~~~~~ 155 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL------VPNAGLGA 155 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc------cCCCCCch
Confidence 4799999998632 234455555553 3432346666 443221 11234678
Q ss_pred hHHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|+.+|..++.+.+ ..|+++++++|+.+.+............. .........+......++++++|+|+.++.
T Consensus 156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (275)
T PRK05876 156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD 235 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence 9999998554443 25899999999998776543221110000 001111222322334578999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
.+..+ +. ++. ++ .....++.+.+.+...
T Consensus 236 ai~~~----~~-~~~-~~-~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 236 AILAN----RL-YVL-PH-AASRASIRRRFERIDR 263 (275)
T ss_pred HHHcC----Ce-EEe-cC-hhhHHHHHHHHHHHHH
Confidence 99754 33 333 23 3455666666555543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-17 Score=134.63 Aligned_cols=191 Identities=13% Similarity=0.159 Sum_probs=125.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA----ERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG 80 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH----HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999984221 11112222 2347889999999999988775
Q ss_pred CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..++ ..++.++++.+ .+++++ |+...... .+....|
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~------~~~~~~Y 153 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAG------GRGRAAY 153 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccC------CCCccHH
Confidence 6899999998632 2222 34455556666 677776 54332211 1235679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~ 203 (310)
+.+|...+.+++. .+++++.++|+.+.+.......... ..............+ ..+++++|+|.++..+
T Consensus 154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l 230 (252)
T PRK06138 154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH---ADPEALREALRARHPMNRFGTAEEVAQAALFL 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccc---cChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999998877754 3789999999988776433221110 000000000001111 2378899999999999
Q ss_pred hcCCc
Q 021596 204 VDDPR 208 (310)
Q Consensus 204 l~~~~ 208 (310)
+.++.
T Consensus 231 ~~~~~ 235 (252)
T PRK06138 231 ASDES 235 (252)
T ss_pred cCchh
Confidence 87653
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-17 Score=135.60 Aligned_cols=182 Identities=16% Similarity=0.197 Sum_probs=126.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--------~ 76 (310)
++|+||||+|+||+++++.|+++|++|+++.|+. ++. +.+...+++.+.+|+.|.+++.++++ +
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~-----~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKP-----DDV---ARMNSLGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHh---HHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999983 333 22334468899999999988776553 4
Q ss_pred CCEEEEcccchh-------------------hh----hHHHHHHHHHHcCCccEEcc-CCC-CCCccccCCCCCCcchhh
Q 021596 77 VDVVISTVGHAL-------------------LA----DQVKIIAAIKEAGNVTRFFP-SEF-GNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~----~~~~~~~aa~~~~~v~~~v~-s~~-~~~~~~~~~~~~~~~~~y 131 (310)
+|.++|+++... +. ....+++++++.+ .+++|+ |+. +.. ..+....|
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~-------~~~~~~~Y 146 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLI-------STPGRGAY 146 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCccccc-------CCCCccHH
Confidence 689999998532 11 1234567777776 677766 443 321 12335789
Q ss_pred HHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+ ..++++++++||.+...+....... .. .......+.....+++++|+++++..++
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~d~a~~~~~~~ 220 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT-----QS-DKPVENPGIAARFTLGPEAVVPKLRHAL 220 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch-----hh-ccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence 999999987654 3579999999988866544332111 00 1111112223346799999999999999
Q ss_pred cCCc
Q 021596 205 DDPR 208 (310)
Q Consensus 205 ~~~~ 208 (310)
+.++
T Consensus 221 ~~~~ 224 (256)
T PRK08017 221 ESPK 224 (256)
T ss_pred hCCC
Confidence 8764
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.1e-17 Score=136.65 Aligned_cols=199 Identities=16% Similarity=0.134 Sum_probs=126.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++++||||+|+||+++++.|+++|++|+++.|+.... ......+.. ..+.++.+|++|.+++.++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKC----EELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999873211 111122222 346788999999999988776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..++.++++++. +.+ ..++|+ |+.... ...|....
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 158 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVAL------RQRPHMGA 158 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhc------CCCCCcch
Confidence 5799999998642 233444555543 334 456776 443221 11223567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|++++++|||.+................. ......+ ......+++++|+|++++.+
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~dva~a~~~~ 236 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPML-EDWAKWG-QARHDYFLRASDLARAITFV 236 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHH-HHHHHhc-ccccccccCHHHHHHHHHHH
Confidence 99999999988764 389999999987754321111000000000 0000001 12234689999999999999
Q ss_pred hcCCccCCceEEE
Q 021596 204 VDDPRTLNKNLYI 216 (310)
Q Consensus 204 l~~~~~~~~~~~~ 216 (310)
++.+. .+.++++
T Consensus 237 ~~~~~-~~~~~~~ 248 (274)
T PRK07775 237 AETPR-GAHVVNM 248 (274)
T ss_pred hcCCC-CCCeeEE
Confidence 98764 3445555
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-17 Score=136.46 Aligned_cols=204 Identities=14% Similarity=0.144 Sum_probs=134.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||.++++.|+++|++|+++.|+.. +...........+.++.+|+.|.+++.++++ +
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPA-----RARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHH-----HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999832 2221111113457889999999999888776 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+++... .....++++++... +.-.++|+ |+..... ..++...|+
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~~~~~~Y~ 154 (257)
T PRK07067 81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------GEALVSHYC 154 (257)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------CCCCCchhh
Confidence 899999998532 34566677776542 10135655 5433221 122457899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC--CCCC-CCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG--AAAP-PRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.+|...+.+.+. .+++++.++|+.+.+.......... .... .......++.+.....+.+++|+|+++..
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 234 (257)
T PRK07067 155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF 234 (257)
T ss_pred hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence 999998877653 5789999999998776433211100 0000 00011112223334578999999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+++++.+
T Consensus 235 l~s~~~~~~~g~~~~v~g 252 (257)
T PRK07067 235 LASADADYIVAQTYNVDG 252 (257)
T ss_pred HhCcccccccCcEEeecC
Confidence 997542 2467777754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-17 Score=134.93 Aligned_cols=194 Identities=16% Similarity=0.193 Sum_probs=128.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|++|+++++.|+++|++|+++.|+.. +.. ....+. ...+.++.+|+.|++++.++++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEE-----AAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999843 221 122222 2347788899999998888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... .....++++++ .+.+ ++++|+ |+.+... ..+....
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~------~~~~~~~ 153 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT------GNPGQTN 153 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc------CCCCCcH
Confidence 3699999997642 22344555555 4555 678876 5433221 1123467
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .+++++++||+.+.+.....+... ....... .-....+++++|+++++..+
T Consensus 154 y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~dva~~~~~~ 225 (246)
T PRK05653 154 YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE----VKAEILK----EIPLGRLGQPEEVANAVAFL 225 (246)
T ss_pred hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH----HHHHHHh----cCCCCCCcCHHHHHHHHHHH
Confidence 88999887666543 478999999999877644321110 0000000 01114578889999999999
Q ss_pred hcCC--ccCCceEEEcC
Q 021596 204 VDDP--RTLNKNLYIQP 218 (310)
Q Consensus 204 l~~~--~~~~~~~~~~~ 218 (310)
+... ...++.+++.+
T Consensus 226 ~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 226 ASDAASYITGQVIPVNG 242 (246)
T ss_pred cCchhcCccCCEEEeCC
Confidence 8653 23466666653
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=132.61 Aligned_cols=203 Identities=12% Similarity=0.081 Sum_probs=129.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||+|+||++++++|+++|++|++..|+... ........+.. ..+..+.+|+++.+++..+++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE---EMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChH---HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999887765321 11112222222 245678899999998877765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+|||++|... ..+..++++++.+. ....++|+ |+.... ...++...|+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~~~~~~Y~~ 156 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI------RPAYGLSIYGA 156 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc------CCCCCchHHHH
Confidence 5899999998522 23345556665543 11235666 443221 11234678999
Q ss_pred HHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 134 VKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 134 ~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
+|...+.+.+. .++.+..++|+++.+.....+..... ..... ..........+++++|+|+++..++..+
T Consensus 157 sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~dva~~~~~~~~~~ 232 (252)
T PRK06077 157 MKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG--MSEKE--FAEKFTLMGKILDPEEVAEFVAAILKIE 232 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc--ccHHH--HHHhcCcCCCCCCHHHHHHHHHHHhCcc
Confidence 99999887763 26788888999886653222111100 00000 0000111236899999999999999766
Q ss_pred ccCCceEEEcCC
Q 021596 208 RTLNKNLYIQPP 219 (310)
Q Consensus 208 ~~~~~~~~~~~~ 219 (310)
...++.|++.++
T Consensus 233 ~~~g~~~~i~~g 244 (252)
T PRK06077 233 SITGQVFVLDSG 244 (252)
T ss_pred ccCCCeEEecCC
Confidence 556778888644
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.2e-17 Score=134.85 Aligned_cols=203 Identities=18% Similarity=0.168 Sum_probs=129.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++|+||||+|++|+++++.|+++|++|+++.|+.+ ..+. ........+.++.+|+.|++++.++++
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEA-----ALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 479999999999999999999999999999999732 2211 122222246889999999999887765
Q ss_pred CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCc-cEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNV-TRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v-~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... ..++.++++++ ...+ . ++++. |+..... ..+...
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~------~~~~~~ 158 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRL------GYPGRT 158 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEeccccccc------CCCCCc
Confidence 6899999998651 23444555554 3444 4 45655 4433211 112345
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe----cCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL----GDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|...+.+++. .+++++++||+.+.+............ ..+...... ........+++++|+|.
T Consensus 159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 237 (264)
T PRK12829 159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQ-QLGIGLDEMEQEYLEKISLGRMVEPEDIAA 237 (264)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhh-ccCCChhHHHHHHHhcCCCCCCCCHHHHHH
Confidence 799999998887754 478999999999877543322110000 000000000 00011125899999999
Q ss_pred HHHHHhcCC--ccCCceEEEcCC
Q 021596 199 YTIKAVDDP--RTLNKNLYIQPP 219 (310)
Q Consensus 199 ~~~~~l~~~--~~~~~~~~~~~~ 219 (310)
++..++... ...++.+++.+.
T Consensus 238 ~~~~l~~~~~~~~~g~~~~i~~g 260 (264)
T PRK12829 238 TALFLASPAARYITGQAISVDGN 260 (264)
T ss_pred HHHHHcCccccCccCcEEEeCCC
Confidence 998888542 234667777643
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=133.65 Aligned_cols=197 Identities=16% Similarity=0.276 Sum_probs=130.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|+||+++++.|+++|++|+++.|+.... ....+.+.. ..+..+.+|+.|.+++.++++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKL----AAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999999999999983211 112233332 237788999999999888876
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..+..++++++.+ .+ ..++|+ |+.... ...+....|
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~------~~~~~~~~y 159 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSA------LARPGIAPY 159 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhc------cCCCCCccH
Confidence 4899999998642 3344556666653 34 567777 543322 112345789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .|+++..++|+.+.+......... ...............+..++|+|.++..++
T Consensus 160 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 160 TATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD------PEFSAWLEKRTPAGRWGKVEELVGACVFLA 233 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 9999998887653 589999999998877643321110 000000011111234778999999999998
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.+.. ..|..+++.+
T Consensus 234 ~~~~~~~~G~~i~~~g 249 (255)
T PRK07523 234 SDASSFVNGHVLYVDG 249 (255)
T ss_pred CchhcCccCcEEEECC
Confidence 6532 2356666653
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-16 Score=130.33 Aligned_cols=196 Identities=16% Similarity=0.178 Sum_probs=128.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
+|+|+||||+|+||+++++.|+++|++|+++.|..... ..+.+ ....+. ...++++.+|+.|.+++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG-RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999988754322 22221 112222 2357889999999999888774
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH-----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK-----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~-----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..+..++++++. +.+ .+++|+ |+.+.... .+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~------~~~~ 157 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRG------NRGQ 157 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCC------CCCC
Confidence 5899999998642 344666777776 344 567776 55433211 1234
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+++. .+++++.++|+.+.+......... .. .........+.+++|+++++.
T Consensus 158 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-------~~---~~~~~~~~~~~~~~~va~~~~ 227 (249)
T PRK12827 158 VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-------EH---LLNPVPVQRLGEPDEVAALVA 227 (249)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-------HH---HHhhCCCcCCcCHHHHHHHHH
Confidence 6799999988776643 489999999999887543221100 00 000001113457899999999
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.+.. ..++.+.+.
T Consensus 228 ~l~~~~~~~~~g~~~~~~ 245 (249)
T PRK12827 228 FLVSDAASYVTGQVIPVD 245 (249)
T ss_pred HHcCcccCCccCcEEEeC
Confidence 8886532 235555664
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8e-17 Score=134.59 Aligned_cols=199 Identities=18% Similarity=0.176 Sum_probs=127.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|.+.++|+||||+|+||+++++.|+++|++|+++.|+.+.. ....+.+. ...+.++.+|+.|++++.++++.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL----NELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH----HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence 45568999999999999999999999999999999984321 11222221 22356779999999999888762
Q ss_pred -------CCEEEEcccchh--------------------------hhhHHHHHHHHHHcCCccEEcc-CC-CCCCccc--
Q 021596 77 -------VDVVISTVGHAL--------------------------LADQVKIIAAIKEAGNVTRFFP-SE-FGNDVDR-- 119 (310)
Q Consensus 77 -------~d~Vi~~a~~~~--------------------------~~~~~~~~~aa~~~~~v~~~v~-s~-~~~~~~~-- 119 (310)
+|+|||+++... ...+..+++++++.+ ..++|+ |+ .+.....
T Consensus 77 ~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~ 155 (256)
T PRK09186 77 SAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFE 155 (256)
T ss_pred HHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccch
Confidence 899999996321 223345666666666 678777 43 3321110
Q ss_pred --cCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEe
Q 021596 120 --AHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVY 190 (310)
Q Consensus 120 --~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
...+.. ....|+.+|...+.+.+. .++++++++|+.+.+.....+... ... . .....+
T Consensus 156 ~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~----~~~-~-------~~~~~~ 222 (256)
T PRK09186 156 IYEGTSMT-SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA----YKK-C-------CNGKGM 222 (256)
T ss_pred hccccccC-CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH----HHh-c-------CCccCC
Confidence 110111 124699999998887642 478899999987654321111000 000 0 011257
Q ss_pred eccchHHHHHHHHhcCCc-c-CCceEEEc
Q 021596 191 NKEDDIATYTIKAVDDPR-T-LNKNLYIQ 217 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~~~-~-~~~~~~~~ 217 (310)
++++|+|+++..++.+.. . .|..+.+.
T Consensus 223 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 251 (256)
T PRK09186 223 LDPDDICGTLVFLLSDQSKYITGQNIIVD 251 (256)
T ss_pred CCHHHhhhhHhheeccccccccCceEEec
Confidence 899999999999997542 2 34544443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=130.51 Aligned_cols=196 Identities=18% Similarity=0.220 Sum_probs=126.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||||++|+++++.|+++|++|+++.|+.... .......+. ...+.++.+|+.|.+++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999998874321 111222232 2357788899999999888766
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+..++++++.. .+ .+++++ |+.+.... .+....
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~------~~~~~~ 154 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMG------NPGQAN 154 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcC------CCCCch
Confidence 5899999998532 2334455555543 34 567776 44322211 123467
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+++. .++++++++|+.+............ ... .. .......+.+++|+++++..+
T Consensus 155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~-----~~~-~~--~~~~~~~~~~~~~va~~~~~l 226 (248)
T PRK05557 155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDV-----KEA-IL--AQIPLGRLGQPEEIASAVAFL 226 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHH-----HHH-HH--hcCCCCCCcCHHHHHHHHHHH
Confidence 88999988866643 4788999999988654332211100 000 00 001112467889999999888
Q ss_pred hcC--CccCCceEEEc
Q 021596 204 VDD--PRTLNKNLYIQ 217 (310)
Q Consensus 204 l~~--~~~~~~~~~~~ 217 (310)
+.. ....++.+++.
T Consensus 227 ~~~~~~~~~g~~~~i~ 242 (248)
T PRK05557 227 ASDEAAYITGQTLHVN 242 (248)
T ss_pred cCcccCCccccEEEec
Confidence 765 22346677775
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=129.08 Aligned_cols=194 Identities=18% Similarity=0.189 Sum_probs=128.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~Vi 81 (310)
++++||||+|++|+++++.|+++|++|++++|+. ++.+.+. ...+..++.+|+.|.+++.++++ ++|+||
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~-----~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNA-----AALDRLA--GETGCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHH--HHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 6899999999999999999999999999999983 2322111 22357788999999999988887 489999
Q ss_pred Ecccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHH
Q 021596 82 STVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 82 ~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
|+++... ..+..++++++.+. +...++|+ |+..... + .+....|+.+|..
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~-~~~~~~y~~sK~a 156 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-----G-LPDHLAYCASKAA 156 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-----C-CCCCcHhHHHHHH
Confidence 9998632 33445556655442 21256766 5432211 1 1234679999999
Q ss_pred HHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--
Q 021596 138 IRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR-- 208 (310)
Q Consensus 138 ~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-- 208 (310)
++.+.+. .+++++.++|+.+.++........ . ....... .......+++++|+|+++..++..+.
T Consensus 157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~----~-~~~~~~~-~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 230 (245)
T PRK07060 157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD----P-QKSGPML-AAIPLGRFAEVDDVAAPILFLLSDAASM 230 (245)
T ss_pred HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC----H-HHHHHHH-hcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 9887753 478899999998877643211000 0 0000000 01112358999999999999997653
Q ss_pred cCCceEEEc
Q 021596 209 TLNKNLYIQ 217 (310)
Q Consensus 209 ~~~~~~~~~ 217 (310)
..|+.+++.
T Consensus 231 ~~G~~~~~~ 239 (245)
T PRK07060 231 VSGVSLPVD 239 (245)
T ss_pred ccCcEEeEC
Confidence 235666654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3e-16 Score=132.16 Aligned_cols=186 Identities=17% Similarity=0.160 Sum_probs=124.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
|+|+||||+|+||+++++.|+++|++|+++.|+... .......+. ...+.++.+|+.|.+++.++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG----GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999999999999998321 111222232 2357789999999998888775
Q ss_pred CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||++|... +..+..++..+++.+ ..++|+ |+..... ..+....|
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~~~~~Y 149 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLM------QGPAMSSY 149 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcC------CCCCchHH
Confidence 6899999998643 112234555566666 677776 4433221 12335789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .+++++.++|+.+..++....... ...............+++++|+|+.++.++
T Consensus 150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l 223 (270)
T PRK05650 150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGP------NPAMKAQVGKLLEKSPITAADIADYIYQQV 223 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccC------chhHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 9999987766542 478999999999987654432111 000000000001124688999999999999
Q ss_pred cCC
Q 021596 205 DDP 207 (310)
Q Consensus 205 ~~~ 207 (310)
+++
T Consensus 224 ~~~ 226 (270)
T PRK05650 224 AKG 226 (270)
T ss_pred hCC
Confidence 754
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-16 Score=133.17 Aligned_cols=203 Identities=22% Similarity=0.256 Sum_probs=131.2
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-hhhcCCcEEEEccCCCH-HHHHHHhc----
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKNLGVNFVVGDVLNH-ESLVNAIK---- 75 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~-~~~~~~~~---- 75 (310)
.++++|+|+||||.+|+.+++.|+++|+.|+++.|+.... .+... .....+...+..|.... +.+..+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a----~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKA----EDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhh----hhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence 3468999999999999999999999999999999995432 11111 22245566677665443 33333333
Q ss_pred CCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc--chhhHHHHHHHHH
Q 021596 76 QVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA--KSVYYDVKARIRR 140 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~--~~~y~~~K~~~e~ 140 (310)
+..+++-+++... ..+++|+++||+.+| ++|+++ ++++....... .... ...+-..|..+|+
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~--~~~~~~~~~~~~~k~~~e~ 229 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQP--PNILLLNGLVLKAKLKAEK 229 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCC--chhhhhhhhhhHHHHhHHH
Confidence 3445666655332 677899999999999 999988 67665432211 1110 1122268889999
Q ss_pred HHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC-ceEEEc
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN-KNLYIQ 217 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~-~~~~~~ 217 (310)
++++.|++++||||+.+..+......... ... ......+..--.+...|+|+..+.++..+...+ ...+++
T Consensus 230 ~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v 301 (411)
T KOG1203|consen 230 FLQDSGLPYTIIRPGGLEQDTGGQREVVV----DDE--KELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELV 301 (411)
T ss_pred HHHhcCCCcEEEeccccccCCCCcceecc----cCc--cccccccccceeeehhhHHHHHHHHHhhhhhccceeEEee
Confidence 99999999999999988775433222211 111 111112221146888999999999998765444 444444
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.8e-16 Score=128.30 Aligned_cols=198 Identities=16% Similarity=0.165 Sum_probs=127.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|+||+++++.|+++|++|+++.|+.... .......+. ...+.++.+|++|.+++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE---LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 7899999999999999999999999999999874321 112222332 2357889999999998877665
Q ss_pred CCCEEEEcccchh---------------------hhhHHHHHHHHHHc----CC-----ccEEcc-CCCCCCccccCCCC
Q 021596 76 QVDVVISTVGHAL---------------------LADQVKIIAAIKEA----GN-----VTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~~----~~-----v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|+|||+++... ..++.++++++... .. +.++|+ |+......
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------ 153 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV------ 153 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC------
Confidence 5899999998521 33445565555432 11 345666 44332211
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.+....|+.+|...+.+++. .++++++++||.+.+......... . ...... . ......+.++.|++
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~----~-~~~~~~-~-~~~~~~~~~~~d~a 226 (256)
T PRK12745 154 SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK----Y-DALIAK-G-LVPMPRWGEPEDVA 226 (256)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh----H-Hhhhhh-c-CCCcCCCcCHHHHH
Confidence 12346899999999877653 578999999998876532211110 0 000000 0 00112477899999
Q ss_pred HHHHHHhcCCc--cCCceEEEcC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++..++.... ..|..+++.+
T Consensus 227 ~~i~~l~~~~~~~~~G~~~~i~g 249 (256)
T PRK12745 227 RAVAALASGDLPYSTGQAIHVDG 249 (256)
T ss_pred HHHHHHhCCcccccCCCEEEECC
Confidence 99998885432 2467777754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8e-16 Score=127.38 Aligned_cols=180 Identities=18% Similarity=0.196 Sum_probs=122.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
+|++++||||+|++|+.+++.|+++|++|++++|+.+ +.. ..+.+. ...+.++.+|++|.+++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQD-----ALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE 79 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999832 221 112222 2357889999999998887775
Q ss_pred ---CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..+. ..+++.+.+.+ ..++|. |+..... + .+..
T Consensus 80 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~-----~-~~~~ 152 (241)
T PRK07454 80 QFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARN-----A-FPQW 152 (241)
T ss_pred HcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCc-----C-CCCc
Confidence 4899999998632 2222 23444445554 567776 4432211 1 1235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++++++||.+........ ...... ....++.++|+|+++.
T Consensus 153 ~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----------~~~~~~----~~~~~~~~~~va~~~~ 218 (241)
T PRK07454 153 GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----------TVQADF----DRSAMLSPEQVAQTIL 218 (241)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc----------cccccc----ccccCCCHHHHHHHHH
Confidence 6799999998877643 489999999998865432110 000000 0124678999999999
Q ss_pred HHhcCCc
Q 021596 202 KAVDDPR 208 (310)
Q Consensus 202 ~~l~~~~ 208 (310)
.++.++.
T Consensus 219 ~l~~~~~ 225 (241)
T PRK07454 219 HLAQLPP 225 (241)
T ss_pred HHHcCCc
Confidence 9998763
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-15 Score=124.51 Aligned_cols=184 Identities=21% Similarity=0.199 Sum_probs=124.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|++|+++++.|+++|++|+++.|+. .+.. ..+.+.. ..++++.+|+.|.+++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQ-----KELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH-----HHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999983 2221 2223322 468889999999999888776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|+|||+++... +.+...+++++.. .+ ..++|+ |+..... + .+....|+
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~-----~-~~~~~~y~ 154 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTN-----F-FAGGAAYN 154 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhcc-----C-CCCCchHH
Confidence 6899999997532 2223445555543 23 456766 4432211 1 12245788
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|+..+.+.+. .+++++.+||+.+.+++..... . ......+..+|+++.+..++.
T Consensus 155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~--------~---------~~~~~~~~~~d~a~~~~~~l~ 217 (237)
T PRK07326 155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP--------S---------EKDAWKIQPEDIAQLVLDLLK 217 (237)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc--------c---------hhhhccCCHHHHHHHHHHHHh
Confidence 999887766543 5899999999988776432110 0 000124789999999999997
Q ss_pred CCc-cCCceEEEc
Q 021596 206 DPR-TLNKNLYIQ 217 (310)
Q Consensus 206 ~~~-~~~~~~~~~ 217 (310)
.+. .....+.+.
T Consensus 218 ~~~~~~~~~~~~~ 230 (237)
T PRK07326 218 MPPRTLPSKIEVR 230 (237)
T ss_pred CCccccccceEEe
Confidence 763 344455554
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-15 Score=126.36 Aligned_cols=203 Identities=19% Similarity=0.179 Sum_probs=126.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||.++++.|+++|++|+++.++............+.+.. ..++++.+|+.|.+++.++++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 88 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG 88 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence 78999999999999999999999999888877643221112222233322 357788999999999988765
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEE--ccCCC-CCCccccCCCCCCcchhhH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRF--FPSEF-GNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~--v~s~~-~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+++... ..++..+++++...- ...++ +.|+. +.. .|....|+
T Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~--------~~~~~~Y~ 160 (257)
T PRK12744 89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF--------TPFYSAYA 160 (257)
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc--------CCCcccch
Confidence 5899999998632 333445556655320 01222 22332 321 12356899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .+++++.++||.+...+......... ...........+.....+.+++|+|.++..++.
T Consensus 161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (257)
T PRK12744 161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA--VAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT 238 (257)
T ss_pred hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch--hhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence 999999988764 26889999999997654321111000 000000000111111247889999999999998
Q ss_pred CCcc-CCceEEEc
Q 021596 206 DPRT-LNKNLYIQ 217 (310)
Q Consensus 206 ~~~~-~~~~~~~~ 217 (310)
.... .|+++++.
T Consensus 239 ~~~~~~g~~~~~~ 251 (257)
T PRK12744 239 DGWWITGQTILIN 251 (257)
T ss_pred ccceeecceEeec
Confidence 5322 35666665
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.8e-16 Score=128.24 Aligned_cols=195 Identities=18% Similarity=0.198 Sum_probs=129.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||.++++.|+++|++|+++.|+. ........+....+..+.+|+.|.+++.++++ +
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 37899999999999999999999999999999983 23323333334456789999999998888765 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+++... ..+..++++++.. .+ ..++|+ |+.+... ..+....|+
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~~Y~ 162 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVV------ALERHVAYC 162 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhcc------CCCCCchHH
Confidence 799999998642 3344555666543 34 567776 5433221 112346799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+...+...... ..........-....+.+++|+|++++.++.
T Consensus 163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 235 (255)
T PRK06841 163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-------GEKGERAKKLIPAGRFAYPEEIAAAALFLAS 235 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-------hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999998877653 47889999999887654321110 0000000001112357899999999999997
Q ss_pred CCc--cCCceEEEc
Q 021596 206 DPR--TLNKNLYIQ 217 (310)
Q Consensus 206 ~~~--~~~~~~~~~ 217 (310)
.+. ..|..+.+.
T Consensus 236 ~~~~~~~G~~i~~d 249 (255)
T PRK06841 236 DAAAMITGENLVID 249 (255)
T ss_pred ccccCccCCEEEEC
Confidence 642 245666664
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=127.54 Aligned_cols=186 Identities=16% Similarity=0.156 Sum_probs=124.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||+|++|+++++.|+++|++|++++|+.... ....+.+. ...+.++.+|+.|.+++..+++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL----ASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999983221 11122222 2357788999999999888776
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..++.++++++.. .+ ..++|. |+..... + .+....
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~-----~-~~~~~~ 149 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLT-----G-VPTRSG 149 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccC-----C-CCCccH
Confidence 6899999998533 2334455666542 12 345555 4432211 1 123568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .+++++.++||.+...+....... .+. .....+.....+++++|+|+++..+
T Consensus 150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~dva~~i~~~ 222 (263)
T PRK06181 150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG-----DGK--PLGKSPMQESKIMSAEECAEAILPA 222 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc-----ccc--ccccccccccCCCCHHHHHHHHHHH
Confidence 99999998887653 478999999998877644322110 011 1111112223789999999999999
Q ss_pred hcCC
Q 021596 204 VDDP 207 (310)
Q Consensus 204 l~~~ 207 (310)
++..
T Consensus 223 ~~~~ 226 (263)
T PRK06181 223 IARR 226 (263)
T ss_pred hhCC
Confidence 9753
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=128.82 Aligned_cols=197 Identities=13% Similarity=0.108 Sum_probs=129.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|.||+++++.|+++|++|+++.|+.... ....+.+.. ..+.++.+|+.|.+++.++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA----RELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999998873221 112222322 357889999999999888774
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+..++++++.. .+ ..++|+ |+.+... ..+....
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 155 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALW------GAPKLGA 155 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhcc------CCCCcch
Confidence 5899999998632 3334455555543 33 347776 4432211 1123467
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+..+....... ...............+++++|+|+++..+
T Consensus 156 y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~l 228 (250)
T PRK12939 156 YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-------DERHAYYLKGRALERLQVPDDVAGAVLFL 228 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999887753 46888999999876654322110 00000011112234578899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+..+. ..|+.+.+.+
T Consensus 229 ~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 229 LSDAARFVTGQLLPVNG 245 (250)
T ss_pred hCccccCccCcEEEECC
Confidence 97542 3566666653
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=128.62 Aligned_cols=197 Identities=18% Similarity=0.204 Sum_probs=128.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhcC-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIKQ----- 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~----- 76 (310)
.++++||||+|+||+++++.|+++|++|+++.++... ...+..+.+.. ..+.++.+|+.|.+++.++++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE---AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH---HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999876554221 11122233332 3478899999999998888763
Q ss_pred --CCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 77 --VDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 77 --~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
+|+|||+++... ..++..+++++.. .+ ..++|+ |+..... + .+....
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~-~~~~~~ 155 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQA-----G-GFGQTN 155 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcC-----C-CCCCcc
Confidence 799999998733 3344555666653 33 356666 4432211 1 123568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++++++|+.+.+........ ... ...........+.+++|++++++.+
T Consensus 156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~-~~~~~~~~~~~~~~~edva~~~~~~ 227 (247)
T PRK12935 156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPE-------EVR-QKIVAKIPKKRFGQADEIAKGVVYL 227 (247)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccH-------HHH-HHHHHhCCCCCCcCHHHHHHHHHHH
Confidence 99999988776643 48899999999886643221110 000 0000112234689999999999998
Q ss_pred hcCCc-cCCceEEEcC
Q 021596 204 VDDPR-TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~-~~~~~~~~~~ 218 (310)
+.... ..++.+++.+
T Consensus 228 ~~~~~~~~g~~~~i~~ 243 (247)
T PRK12935 228 CRDGAYITGQQLNING 243 (247)
T ss_pred cCcccCccCCEEEeCC
Confidence 86542 3567777753
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=128.80 Aligned_cols=200 Identities=17% Similarity=0.215 Sum_probs=128.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||+|+||+++++.|+++|++|+++.|+.... ......+. ...++++.+|+.|.++++++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAA----EKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999984221 11112222 2458899999999999888775
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... +.+..++++++ ++.+ ..++++ |+.+.... .+....
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~------~~~~~~ 151 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVG------SSGEAV 151 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccC------CCCCch
Confidence 5899999998532 33344444444 3555 667776 44332211 123467
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|+.+|...+.+.+. .++++++++|+.+.+.+........ ...... ...........+..++|+|+++..
T Consensus 152 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (250)
T TIGR03206 152 YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLREAFTRAIPLGRLGQPDDLPGAILF 228 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence 99999887766653 3799999999998876544322110 000000 000000111235678999999999
Q ss_pred HhcCCc--cCCceEEEc
Q 021596 203 AVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~ 217 (310)
++..+. ..|+.+.+.
T Consensus 229 l~~~~~~~~~g~~~~~~ 245 (250)
T TIGR03206 229 FSSDDASFITGQVLSVS 245 (250)
T ss_pred HcCcccCCCcCcEEEeC
Confidence 886542 236667664
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=124.57 Aligned_cols=181 Identities=17% Similarity=0.211 Sum_probs=130.4
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcC---CcEEEEccCCCHHHHHHHhc---
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNL---GVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~---~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.+++++|||||+.||..+++.|.++|++|+.+.|+ .++... .++++.. .++++.+|+++++++..+.+
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~-----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRGYNLILVARR-----EDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHH
Confidence 36799999999999999999999999999999999 444422 2334332 36889999999999888775
Q ss_pred ----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
.+|++|++||... ...+..++.-+.+++ -.++|. +|.+.. .+.|.
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~------~p~p~ 152 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGL------IPTPY 152 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhc------CCCcc
Confidence 5999999999865 334555666666666 567776 343322 22345
Q ss_pred chhhHHHHHHHHHHH-------HHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAV-------EAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l-------~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|..+-.+- +..|+.++.+.||.+...|.. -... ..... ....-+++++|+|+..
T Consensus 153 ~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~------~~~~~-----~~~~~~~~~~~va~~~ 220 (265)
T COG0300 153 MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGS------DVYLL-----SPGELVLSPEDVAEAA 220 (265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cccc------ccccc-----cchhhccCHHHHHHHH
Confidence 788999999875443 346899999999999887764 1110 00000 1124688999999999
Q ss_pred HHHhcCC
Q 021596 201 IKAVDDP 207 (310)
Q Consensus 201 ~~~l~~~ 207 (310)
...+...
T Consensus 221 ~~~l~~~ 227 (265)
T COG0300 221 LKALEKG 227 (265)
T ss_pred HHHHhcC
Confidence 9999865
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=124.86 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=124.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------CC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------QV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------~~ 77 (310)
.++|+||||+|++|+++++.|+++|++|+++.|+.... ...+++.+|+.|.+++.++++ ++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 69 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------------FPGELFACDLADIEQTAATLAQINEIHPV 69 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------------cCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999984321 123678999999998887776 68
Q ss_pred CEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|+|||+++... ..+ ...++.++++.+ ..++|+ |+.+.. ..+....|+.
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-------~~~~~~~Y~~ 141 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF-------GALDRTSYSA 141 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc-------CCCCchHHHH
Confidence 99999998642 112 334455556666 677776 543321 1123568999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .+++++.++||.+............ ......... ......+..++|+|.++..++..
T Consensus 142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~~ 216 (234)
T PRK07577 142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG----SEEEKRVLA-SIPMRRLGTPEEVAAAIAFLLSD 216 (234)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc----hhHHHHHhh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 4899999999998776432211100 000000000 00111245789999999999976
Q ss_pred Cc--cCCceEEEc
Q 021596 207 PR--TLNKNLYIQ 217 (310)
Q Consensus 207 ~~--~~~~~~~~~ 217 (310)
+. ..|..+.+.
T Consensus 217 ~~~~~~g~~~~~~ 229 (234)
T PRK07577 217 DAGFITGQVLGVD 229 (234)
T ss_pred ccCCccceEEEec
Confidence 42 235555554
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=124.42 Aligned_cols=177 Identities=18% Similarity=0.179 Sum_probs=121.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|++|.+++++|+++|++|++++|+.... ......+.. ..+.++.+|+.|++++.++++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL----KAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999984221 111222322 357788999999999988876
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..++.++.+++. +.+ .+++|+ |+..... ..+....|
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~------~~~~~~~Y 156 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQK------GAAVTSAY 156 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhcc------CCCCCcch
Confidence 6899999997542 223334455544 444 566666 4432211 11234679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+++. .++++++++||.+.......... .. . ....++.++|+|+.+..++
T Consensus 157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~------~~------~---~~~~~~~~~~~a~~~~~~l 221 (239)
T PRK07666 157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL------TD------G---NPDKVMQPEDLAEFIVAQL 221 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc------cc------c---CCCCCCCHHHHHHHHHHHH
Confidence 9999988777642 58999999999887764321100 00 0 1124678899999999999
Q ss_pred cCC
Q 021596 205 DDP 207 (310)
Q Consensus 205 ~~~ 207 (310)
..+
T Consensus 222 ~~~ 224 (239)
T PRK07666 222 KLN 224 (239)
T ss_pred hCC
Confidence 865
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=129.67 Aligned_cols=201 Identities=13% Similarity=0.097 Sum_probs=129.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|++..|+.... ......+.+.. ..+.++.+|+.|.+++.++++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ--DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 37899999999999999999999999998887763221 11112223332 346788999999998887765
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+++... +.++..+++++...- .-.++|+ |+..... ..+....|+
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~------~~~~~~~Y~ 206 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ------PSPTLLDYA 206 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC------CCCCchhHH
Confidence 5899999998531 344566777776431 0236666 4433221 122356799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|..++.+.+. .|+++..++||.+.+.+..... ........+........+..++|+|.++..++.
T Consensus 207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~------~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s 280 (300)
T PRK06128 207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG------QPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS 280 (300)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC------CCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887753 4899999999998776432110 000000011111122346788999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. ..|+.+++.+
T Consensus 281 ~~~~~~~G~~~~v~g 295 (300)
T PRK06128 281 QESSYVTGEVFGVTG 295 (300)
T ss_pred ccccCccCcEEeeCC
Confidence 542 2366777754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-15 Score=126.03 Aligned_cols=196 Identities=18% Similarity=0.188 Sum_probs=125.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+.. .. .+.+...++.++.+|+.|.+++.++++ ++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~----~~---~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE----NE---AKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH----HH---HHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 78999999999999999999999999988877632 11 233334468899999999999888776 58
Q ss_pred CEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|+|||+++... ..+ +..+++.+++.+ ..++|+ |+..... +..+....|+.
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~~Y~a 154 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIG-----TAAEGTTFYAI 154 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCC-----CCCCCccHhHH
Confidence 99999998632 222 344555555554 457766 4322110 11223467999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEeeccchHHHHHHHHhc
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+|...+.+.+. .++++..++||++...+....... ...... ...........+..++|+|++++.++.
T Consensus 155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s 230 (255)
T PRK06463 155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLAS 230 (255)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcC
Confidence 99999877754 478899999998765433211000 000000 000011112245779999999999986
Q ss_pred CCc--cCCceEEEc
Q 021596 206 DPR--TLNKNLYIQ 217 (310)
Q Consensus 206 ~~~--~~~~~~~~~ 217 (310)
.+. ..|..+.+.
T Consensus 231 ~~~~~~~G~~~~~d 244 (255)
T PRK06463 231 DDARYITGQVIVAD 244 (255)
T ss_pred hhhcCCCCCEEEEC
Confidence 542 235555554
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=125.71 Aligned_cols=176 Identities=19% Similarity=0.226 Sum_probs=122.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhc---CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKN---LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~---~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||++++++|+++| ++|+++.|+.+.. .....+++.. .+++++.+|+.|.+++.++++
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~---~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPR---RDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchh---HHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 4789999999999999999999996 8999999985421 1112233322 357899999999988665554
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++|+++|... ....+.+++++++.+ ..++|+ |+..... + .+...
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~-----~-~~~~~ 157 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGER-----V-RRSNF 157 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcC-----C-CCCCc
Confidence 6999999887642 112245677777776 678776 5543211 1 12345
Q ss_pred hhHHHHHHHHHHH-------HHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAV-------EAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l-------~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|+....+. +..++++++++||.+...+.... .. . ...+.++|+|+.+..
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------~~---------~--~~~~~~~~~A~~i~~ 218 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------KE---------A--PLTVDKEDVAKLAVT 218 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------CC---------C--CCCCCHHHHHHHHHH
Confidence 7999999887553 34689999999999877543211 00 0 124688999999999
Q ss_pred HhcCCc
Q 021596 203 AVDDPR 208 (310)
Q Consensus 203 ~l~~~~ 208 (310)
.+.+++
T Consensus 219 ~~~~~~ 224 (253)
T PRK07904 219 AVAKGK 224 (253)
T ss_pred HHHcCC
Confidence 997653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=126.02 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=126.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ......+.+.. ..+.++.+|+.|.+++.++++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999972 22223333333 246788999999988877665
Q ss_pred -CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+|+... ......++..+++.+ ..++|+ |+.... . +...
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------~--~~~~ 153 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR------G--INRV 153 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc------C--CCCC
Confidence 5899999997421 112335566666665 567776 543221 0 1235
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE------ecCCCceeEeeccchH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI------LGDGNPKAVYNKEDDI 196 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~D~ 196 (310)
.|+.+|...+.+.+. .++++..++||.+.+............ ........ .-......-+.+++|+
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 232 (260)
T PRK12823 154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQ-SEQEKAWYQQIVDQTLDSSLMKRYGTIDEQ 232 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccc-cccccccHHHHHHHHhccCCcccCCCHHHH
Confidence 799999999887753 378999999999877531100000000 00000000 0001111235678999
Q ss_pred HHHHHHHhcCCc--cCCceEEEc
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
|+++..++.+.. ..+..+++.
T Consensus 233 a~~~~~l~s~~~~~~~g~~~~v~ 255 (260)
T PRK12823 233 VAAILFLASDEASYITGTVLPVG 255 (260)
T ss_pred HHHHHHHcCcccccccCcEEeec
Confidence 999999886542 235666664
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=127.07 Aligned_cols=196 Identities=12% Similarity=0.018 Sum_probs=124.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+|+++||||+|+||+++++.|+++|++|+++.|+... ........+. ...+.++.+|++|.+++.++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRD---EAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999888775321 1111222222 2347789999999999888775
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC---CccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG---NVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~---~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... +.++.++++++.... .-.+++. ++-... ...|....|
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~------~~~p~~~~Y 159 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVW------NLNPDFLSY 159 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhc------CCCCCchHH
Confidence 4799999998532 334456666655431 1234554 221110 112334579
Q ss_pred HHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 132 YDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 132 ~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+.+|...+.+.+. .++.++.++||.+........... ........ .....+++|+|+++..+++
T Consensus 160 ~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~----~~~~~~~~d~a~~~~~~~~ 229 (258)
T PRK09134 160 TLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF------ARQHAATP----LGRGSTPEEIAAAVRYLLD 229 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH------HHHHhcCC----CCCCcCHHHHHHHHHHHhc
Confidence 9999998877754 237788889987755321100000 00000000 1124778999999999998
Q ss_pred CCccCCceEEEcC
Q 021596 206 DPRTLNKNLYIQP 218 (310)
Q Consensus 206 ~~~~~~~~~~~~~ 218 (310)
.+...++.+++.+
T Consensus 230 ~~~~~g~~~~i~g 242 (258)
T PRK09134 230 APSVTGQMIAVDG 242 (258)
T ss_pred CCCcCCCEEEECC
Confidence 7665667777754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=125.61 Aligned_cols=194 Identities=13% Similarity=0.079 Sum_probs=126.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||.++++.|+++|++|+++.|+.+. .....+.+.. ..+..+.+|++|.+++.++++
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEG----AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999999998321 1112222322 246788999999998877665
Q ss_pred -CCCEEEEcccchh----------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 -QVDVVISTVGHAL----------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 -~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||+++... +.++.++++++... + .+++|+ |+.+.. ++
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~---------~~ 151 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAW---------LY 151 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEeccccc---------CC
Confidence 5899999998531 33455566666542 3 456766 443221 12
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.+.|+.+|+.++.+.+. .+++++.++||.+........... ..............+.+++|+++++
T Consensus 152 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~ 224 (250)
T PRK07774 152 SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPK-------EFVADMVKGIPLSRMGTPEDLVGMC 224 (250)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCH-------HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 46799999999888754 368889999988765543211100 0000000001111245789999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
..++..+. ..++.|++.+
T Consensus 225 ~~~~~~~~~~~~g~~~~v~~ 244 (250)
T PRK07774 225 LFLLSDEASWITGQIFNVDG 244 (250)
T ss_pred HHHhChhhhCcCCCEEEECC
Confidence 99887542 3566777764
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=125.26 Aligned_cols=175 Identities=18% Similarity=0.250 Sum_probs=120.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc----C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK----Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~----~ 76 (310)
||+|+||||+|+||.++++.|+++|++|++++|+.+.. ....+.+. ..+++++++|+.|.+++.++++ .
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERL----ERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH----HHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 57999999999999999999999999999999984321 11112221 2357899999999999888776 4
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|+|+++... ..++.++++++. +.+ ..++++ |+..... ..+....|+
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~~Y~ 149 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDR------GRASNYVYG 149 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccC------CCCCCcccH
Confidence 699999998642 233444555543 344 567776 4432211 112345799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++|+.+.+...... . .+ ...+.+++|+|+.+...++
T Consensus 150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~--------~-----~~-----~~~~~~~~~~a~~i~~~~~ 211 (243)
T PRK07102 150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL--------K-----LP-----GPLTAQPEEVAKDIFRAIE 211 (243)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc--------C-----CC-----ccccCCHHHHHHHHHHHHh
Confidence 999988776653 478999999998876532110 0 00 1135678999999999998
Q ss_pred CC
Q 021596 206 DP 207 (310)
Q Consensus 206 ~~ 207 (310)
.+
T Consensus 212 ~~ 213 (243)
T PRK07102 212 KG 213 (243)
T ss_pred CC
Confidence 54
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-15 Score=128.63 Aligned_cols=188 Identities=15% Similarity=0.201 Sum_probs=127.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
+++|+||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+.. ..+.++.+|+.|.++++++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~-----~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGE-----EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2221 2233332 347788999999999988765
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... +..+..+++.+++.+ ..++|+ |+..... ..|...
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~------~~~~~~ 155 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYR------SIPLQS 155 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhcc------CCCcch
Confidence 5899999998632 233455667777665 567776 4433221 123357
Q ss_pred hhHHHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 130 VYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.|+.+|...+.+.+. .++.++.++|+.+...+....... ... .......+..++|+|+++
T Consensus 156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~----~~~-------~~~~~~~~~~pe~vA~~i 224 (334)
T PRK07109 156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR----LPV-------EPQPVPPIYQPEVVADAI 224 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh----ccc-------cccCCCCCCCHHHHHHHH
Confidence 899999998766542 358899999998876543221110 000 001112456899999999
Q ss_pred HHHhcCCccCCceEEEc
Q 021596 201 IKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~~ 217 (310)
+.++.++ ++.+++.
T Consensus 225 ~~~~~~~---~~~~~vg 238 (334)
T PRK07109 225 LYAAEHP---RRELWVG 238 (334)
T ss_pred HHHHhCC---CcEEEeC
Confidence 9999876 3455663
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-15 Score=124.56 Aligned_cols=173 Identities=18% Similarity=0.207 Sum_probs=119.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcC-CcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNL-GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~-~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+|+|+||||+|+||+++++.|+++|++|+++.|+. ++... .+.+... .+.++.+|++|.+++.++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRT-----DALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 37999999999999999999999999999999983 23221 1222212 57889999999999988765
Q ss_pred -CCCEEEEcccchh--------------------hhhHHH----HHHHHHHcCCccEEcc-CC-CCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVK----IIAAIKEAGNVTRFFP-SE-FGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~----~~~aa~~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~ 128 (310)
.+|++||+++... +.++.+ ++.++++.+ ..++|. || .+.. ..|..
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~-------~~~~~ 148 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVR-------GLPGA 148 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC-------CCCCC
Confidence 3799999998532 222333 444666665 567775 43 3321 12235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .+++++.++|+.+.+....... .. . -.+++++|+++.+.
T Consensus 149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------~~--~--~~~~~~~~~a~~~~ 210 (257)
T PRK07024 149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--------------YP--M--PFLMDADRFAARAA 210 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--------------CC--C--CCccCHHHHHHHHH
Confidence 6799999999887743 5899999999988765321100 00 0 01367899999999
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
.++.+.
T Consensus 211 ~~l~~~ 216 (257)
T PRK07024 211 RAIARG 216 (257)
T ss_pred HHHhCC
Confidence 999754
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7e-16 Score=129.15 Aligned_cols=205 Identities=15% Similarity=0.085 Sum_probs=126.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++|+||||+|+||+++++.|+++|++|+++.|+.... ....+.+.. ..+.++.+|++|.+++..+++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA----ANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI 78 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999974321 111122221 357889999999988887665
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... ..++..+++++ ++.+.-.++|+ |+..... ..+...
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~------~~~~~~ 152 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV------GSKHNS 152 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc------CCCCCc
Confidence 5799999998532 23333334443 33431136665 4432111 112346
Q ss_pred hhHHHHHHHHHHHH-------HcCCCEEEEecceeccc-cccccCCCCC--CCC-CCCeEEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVE-------AEGIPYTYVESYCFDGY-FLPNLLQPGA--AAP-PRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|+..+.+.+ ..|+++..++||.+.+. ....+..... ... ..........+.....+++++|++.
T Consensus 153 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~ 232 (259)
T PRK12384 153 GYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLN 232 (259)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHH
Confidence 79999999776654 36899999999975432 2111111000 000 0000111112223357889999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
++..++.+.. ..|+.+++.++
T Consensus 233 ~~~~l~~~~~~~~~G~~~~v~~g 255 (259)
T PRK12384 233 MLLFYASPKASYCTGQSINVTGG 255 (259)
T ss_pred HHHHHcCcccccccCceEEEcCC
Confidence 9998886542 24677777643
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=124.66 Aligned_cols=197 Identities=15% Similarity=0.208 Sum_probs=124.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||+|.||+++++.|+++|++|++++|+.. +.+ ..+.+ ...+.++.+|+.|.+++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDAD-----NGAAVAASL-GERARFIATDITDDAAIERAVATVVARFG 79 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 479999999999999999999999999999999832 221 11222 3457889999999999887775
Q ss_pred CCCEEEEcccchh------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 QVDVVISTVGHAL------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
.+|++||+++... ..+...+++++.. .+ -.++|+ |+..... ..+....|+.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~------~~~~~~~Y~a 152 (261)
T PRK08265 80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTSISAKF------AQTGRWLYPA 152 (261)
T ss_pred CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECchhhcc------CCCCCchhHH
Confidence 5799999998531 2223334444332 22 245665 4432211 1123467999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .++++..++||.+...+......... ........ .......+..++|+|+++..++.+
T Consensus 153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~--~~~~~~~~--~~~p~~r~~~p~dva~~~~~l~s~ 228 (261)
T PRK08265 153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR--AKADRVAA--PFHLLGRVGDPEEVAQVVAFLCSD 228 (261)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch--hHHHHhhc--ccCCCCCccCHHHHHHHHHHHcCc
Confidence 99998877753 47889999999876654332211000 00000000 001112356789999999999975
Q ss_pred Cc--cCCceEEEc
Q 021596 207 PR--TLNKNLYIQ 217 (310)
Q Consensus 207 ~~--~~~~~~~~~ 217 (310)
+. ..|..+.+.
T Consensus 229 ~~~~~tG~~i~vd 241 (261)
T PRK08265 229 AASFVTGADYAVD 241 (261)
T ss_pred cccCccCcEEEEC
Confidence 32 245555554
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=126.15 Aligned_cols=182 Identities=19% Similarity=0.128 Sum_probs=119.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
|++++||||||+||+++++.|+++|++|++++|+. .+.+.+ ..+....+.++.+|+.|.+++.++++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINE-----AGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999999983 222211 22223468899999999998887765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... +.++..+++++ +..+ ..++|+ |+...... .+....
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~------~~~~~~ 148 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYG------QPGLAV 148 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcC------CCCchh
Confidence 4699999998642 23344455554 3444 456665 44322111 123567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .+++++.++|+.+.......... ....... ......+.++|+|+++..+
T Consensus 149 Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~-------~~~~~~~---~~~~~~~~~~~va~~~~~~ 218 (260)
T PRK08267 149 YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN-------EVDAGST---KRLGVRLTPEDVAEAVWAA 218 (260)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc-------hhhhhhH---hhccCCCCHHHHHHHHHHH
Confidence 99999998877653 47899999999886654321000 0000000 0011236678999999998
Q ss_pred hcCC
Q 021596 204 VDDP 207 (310)
Q Consensus 204 l~~~ 207 (310)
++.+
T Consensus 219 ~~~~ 222 (260)
T PRK08267 219 VQHP 222 (260)
T ss_pred HhCC
Confidence 8654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=141.05 Aligned_cols=202 Identities=16% Similarity=0.098 Sum_probs=131.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhc-CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKN-LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|+||+++++.|+++|++|++++|+. .+... ...+.. .++.++.+|++|.+++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~-----~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDE-----EAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCH-----HHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999999983 22221 122221 367899999999999887775
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCc-cEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNV-TRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v-~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||++|... ..+..++++++ ++.+ . .++|+ ||.... ...+....
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~------~~~~~~~~ 570 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAV------NPGPNFGA 570 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCcccc------CCCCCcHH
Confidence 6899999998532 23344554444 4444 3 46665 543222 11234578
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceec--cccccccCCCCCCCCCCCeE----EEecCCCceeEeeccchHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFD--GYFLPNLLQPGAAAPPRDKV----VILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~D~a 197 (310)
|+.+|...+.+.+. .++++..++|+.++ ..+.............+... ..+..+.....+++++|+|
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA 650 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVA 650 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHH
Confidence 99999999988764 36889999999995 32222110000000000000 0223344456789999999
Q ss_pred HHHHHHhc--CCccCCceEEEcC
Q 021596 198 TYTIKAVD--DPRTLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~--~~~~~~~~~~~~~ 218 (310)
+++..++. .....|..+++.+
T Consensus 651 ~a~~~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 651 EAVVFLASGLLSKTTGAIITVDG 673 (681)
T ss_pred HHHHHHhCccccCCcCCEEEECC
Confidence 99999884 3344567777754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.1e-15 Score=123.96 Aligned_cols=195 Identities=13% Similarity=0.099 Sum_probs=125.7
Q ss_pred EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhh-cCCcEEEEccCCCHHHHHHHhc---CCCEEEE
Q 021596 8 LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-NLGVNFVVGDVLNHESLVNAIK---QVDVVIS 82 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~-~~~~~~v~~D~~d~~~~~~~~~---~~d~Vi~ 82 (310)
+||||+|++|+++++.|+++|++|+++.|+. .+... ...+. ..+++++.+|+.|.+++.++++ ++|++||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSR-----DRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 5999999999999999999999999999983 22211 12222 2458889999999999999887 4799999
Q ss_pred cccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHH
Q 021596 83 TVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 83 ~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
+++... .....++.++....+ ..++|+ |+.+.. ...+....|+.+|...+.+.
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~------~~~~~~~~Y~~sK~a~~~~~ 148 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAV------RPSASGVLQGAINAALEALA 148 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhc------CCCCcchHHHHHHHHHHHHH
Confidence 998532 223445666544444 567776 443322 11234678999999999888
Q ss_pred HHc-----CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEc
Q 021596 143 EAE-----GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 143 ~~~-----~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~ 217 (310)
+.. +++++.++|+.+........... ............-....+..++|+|+++..++.++...|+.+++.
T Consensus 149 ~~la~e~~~irv~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~ 224 (230)
T PRK07041 149 RGLALELAPVRVNTVSPGLVDTPLWSKLAGD----AREAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVD 224 (230)
T ss_pred HHHHHHhhCceEEEEeecccccHHHHhhhcc----chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeC
Confidence 652 46677778887765433221110 000000000000001124567999999999998664457777775
Q ss_pred C
Q 021596 218 P 218 (310)
Q Consensus 218 ~ 218 (310)
+
T Consensus 225 g 225 (230)
T PRK07041 225 G 225 (230)
T ss_pred C
Confidence 4
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.7e-15 Score=125.51 Aligned_cols=204 Identities=13% Similarity=0.141 Sum_probs=128.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+... .......+. ...+..+.+|++|.+++..+++
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER----LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999999998421 112223333 2357889999999999887664
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..+...+++++... +...++|+ |+..... + .+....|
T Consensus 81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----~-~~~~~~Y 154 (258)
T PRK07890 81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----S-QPKYGAY 154 (258)
T ss_pred CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----C-CCCcchh
Confidence 5799999997531 33345566666542 10246766 4433221 1 2235689
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC--CCCCe-EEEecCCCceeEeeccchHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA--PPRDK-VVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
+.+|...+.+++. .++++..++|+.+.+............. ..... ............+.+++|+|+++.
T Consensus 155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~ 234 (258)
T PRK07890 155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVL 234 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHH
Confidence 9999999887764 3789999999998876433211110000 00000 000000111234678999999998
Q ss_pred HHhcCC--ccCCceEEEc
Q 021596 202 KAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~--~~~~~~~~~~ 217 (310)
.++... ...|+.+.+.
T Consensus 235 ~l~~~~~~~~~G~~i~~~ 252 (258)
T PRK07890 235 FLASDLARAITGQTLDVN 252 (258)
T ss_pred HHcCHhhhCccCcEEEeC
Confidence 888642 2234555443
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.5e-15 Score=125.69 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=128.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|.||+++++.|+++|++|++++|+.+ +.+..+.+. ...+.++.+|+.|.+++.++++
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP-----DDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG 82 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChh-----hHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999843 223333332 2457889999999999988776
Q ss_pred CCCEEEEcccchh------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 QVDVVISTVGHAL------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+|||++|... ..+..++.+++.. .+ ..++++ |+..... ..+....|+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~------~~~~~~~Y~~ 155 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALT------GQGGTSGYAA 155 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhcc------CCCCCchhHH
Confidence 5899999998532 2223344444432 22 346666 4432221 1123568999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEeeccchHHHHHHHHhc
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+|...+.+.+. .+++++.++||.+.+........... ...... ...........++.++|+|+++..++.
T Consensus 156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (258)
T PRK08628 156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFD--DPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS 233 (258)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhcc--CHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC
Confidence 99999888764 47899999999988765332111100 000000 000000001246889999999999996
Q ss_pred CC--ccCCceEEEc
Q 021596 206 DP--RTLNKNLYIQ 217 (310)
Q Consensus 206 ~~--~~~~~~~~~~ 217 (310)
.. ...|..+.+.
T Consensus 234 ~~~~~~~g~~~~~~ 247 (258)
T PRK08628 234 ERSSHTTGQWLFVD 247 (258)
T ss_pred hhhccccCceEEec
Confidence 54 2345666664
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=122.82 Aligned_cols=194 Identities=17% Similarity=0.202 Sum_probs=125.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
+++|+||||+|+||.++++.|+++|++|+++ .|+.. +.. ....+. ...+.++.+|+.|++++.++++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE-----AAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999988 88732 221 112222 2347889999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..+..++++++. +.+ .+++|+ |+.+.... .+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~------~~~~ 152 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIG------ASCE 152 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccC------CCCc
Confidence 6899999998642 223334444443 444 556766 54332211 1224
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+++. .+++++.++||.+............ ...... ......+..++|+++++.
T Consensus 153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~va~~~~ 224 (247)
T PRK05565 153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED----KEGLAE----EIPLGRLGKPEEIAKVVL 224 (247)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH----HHHHHh----cCCCCCCCCHHHHHHHHH
Confidence 5788999887766543 5899999999988765433221110 000000 011124678899999999
Q ss_pred HHhcCC--ccCCceEEEc
Q 021596 202 KAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~--~~~~~~~~~~ 217 (310)
.++... ...|+.+++.
T Consensus 225 ~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 225 FLASDDASYITGQIITVD 242 (247)
T ss_pred HHcCCccCCccCcEEEec
Confidence 998653 2345556554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-15 Score=122.45 Aligned_cols=194 Identities=13% Similarity=0.169 Sum_probs=123.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|+.|++..|+. .+...........++++.+|+.|.+++.++++ +
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV-----EKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999888888772 23221111113457889999999999887754 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+++... +.+..++++++. +.+ ..++|+ |+...... .+....|+
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~------~~~~~~Y~ 153 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTG------NPGQANYC 153 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcC------CCCCcchH
Confidence 899999998632 233444555443 334 567776 54322211 12245798
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .+++++.++|+++...+....... ..... .. ......+..++|+++++..++.
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-----~~~~~--~~-~~~~~~~~~~~~ia~~~~~l~~ 225 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK-----QKEAI--MG-AIPMKRMGTGAEVASAVAYLAS 225 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH-----HHHHH--hc-CCCCCCCcCHHHHHHHHHHHcC
Confidence 999877665542 478999999998765433221100 00000 00 0111235678999999988886
Q ss_pred CCcc--CCceEEEc
Q 021596 206 DPRT--LNKNLYIQ 217 (310)
Q Consensus 206 ~~~~--~~~~~~~~ 217 (310)
.+.. .|+.+++.
T Consensus 226 ~~~~~~~G~~~~~~ 239 (245)
T PRK12936 226 SEAAYVTGQTIHVN 239 (245)
T ss_pred ccccCcCCCEEEEC
Confidence 5422 36667765
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-15 Score=123.73 Aligned_cols=196 Identities=15% Similarity=0.159 Sum_probs=126.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||.++++.|+++|++|++++|+.+ +.+ ..+.+. ..++.++.+|++|.+++.++++
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTES-----QLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999832 221 222222 2357889999999999887765
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHH-----cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKE-----AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~-----~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+|+... ..++.++.+++.. .+ ..++|. |+..... ..+..
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~------~~~~~ 157 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRL------AGRGF 157 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccC------CCCCC
Confidence 6899999998532 3445667777653 33 456666 4432211 12345
Q ss_pred hhhHHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
..|+.+|..++.+.+. .++++..++||.+........... ..-....... .....+..++|+|++++.
T Consensus 158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~va~~~~~ 231 (263)
T PRK07814 158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN-----DELRAPMEKA-TPLRRLGDPEDIAAAAVY 231 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC-----HHHHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence 7899999999888764 246778888887765432211100 0000000000 011235678999999999
Q ss_pred HhcCC--ccCCceEEEc
Q 021596 203 AVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~--~~~~~~~~~~ 217 (310)
++.+. ...++.+.+.
T Consensus 232 l~~~~~~~~~g~~~~~~ 248 (263)
T PRK07814 232 LASPAGSYLTGKTLEVD 248 (263)
T ss_pred HcCccccCcCCCEEEEC
Confidence 88653 2245555554
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.8e-15 Score=123.52 Aligned_cols=145 Identities=19% Similarity=0.232 Sum_probs=103.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
||+++||||+|++|+++++.|+++|++|++++|+ +.+. +.+...+++++.+|+.|.+++.++++ +
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARK-----AEDV---EALAAAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999998 3232 23334568889999999998887764 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
+|+|||++|... ..++.++++++.. .+ ..++|. |+..... ..+....|+.
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~~ 145 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVL------VTPFAGAYCA 145 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccC------CCCCccHHHH
Confidence 899999998532 2233445555432 12 345555 4322211 1223567999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceecccccc
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~ 163 (310)
+|...+.+.+. .|++++.++||.+..++..
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 182 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS 182 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence 99998776542 5899999999998776543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.9e-15 Score=123.07 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=125.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcC------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQ------ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~------ 76 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.. .+.+. ...+ ...+.++++|+.|++++.++++.
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE----DAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999988766522 12211 1112 24678899999999998887762
Q ss_pred --CCEEEEcccchh-------------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCC
Q 021596 77 --VDVVISTVGHAL-------------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 77 --~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
+|++||+++... ..+..++++++. +.+ ..++|+ ++.... . +.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~----~-~~ 153 (253)
T PRK08642 80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ----N-PV 153 (253)
T ss_pred CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc----C-CC
Confidence 899999997420 334455666654 334 456666 442211 0 22
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
. +...|+.+|...+.+.+. .++++..++||++.......... ...............+.+++|+|
T Consensus 154 ~-~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va 225 (253)
T PRK08642 154 V-PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-------DEVFDLIAATTPLRKVTTPQEFA 225 (253)
T ss_pred C-CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-------HHHHHHHHhcCCcCCCCCHHHHH
Confidence 2 256899999999988864 36888889999886542211100 00000000011113578899999
Q ss_pred HHHHHHhcCC--ccCCceEEEc
Q 021596 198 TYTIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 198 ~~~~~~l~~~--~~~~~~~~~~ 217 (310)
+++..++.++ ...|..+.+.
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~vd 247 (253)
T PRK08642 226 DAVLFFASPWARAVTGQNLVVD 247 (253)
T ss_pred HHHHHHcCchhcCccCCEEEeC
Confidence 9999999753 2345666664
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.6e-15 Score=123.39 Aligned_cols=195 Identities=14% Similarity=0.123 Sum_probs=124.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||++++++|+++|++|+++.|+.. ....+.+. ...+.++.+|++|.+++..+++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP------SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999999998631 11112222 2357889999999999887664
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... ..+..++++++.. .+...++|+ |+..... + .+....
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~-~~~~~~ 152 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ-----G-GIRVPS 152 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc-----C-CCCCch
Confidence 5899999998642 2333445555532 221246665 4422111 1 123457
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+............ ..... ... ......++.++|+|+++..+
T Consensus 153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~---~~~~~--~~~-~~~~~~~~~~~dva~~~~~l 226 (248)
T TIGR01832 153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADE---DRNAA--ILE-RIPAGRWGTPDDIGGPAVFL 226 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccCh---HHHHH--HHh-cCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 3799999999988766432111000 00000 000 01123688999999999999
Q ss_pred hcCCcc--CCceEEE
Q 021596 204 VDDPRT--LNKNLYI 216 (310)
Q Consensus 204 l~~~~~--~~~~~~~ 216 (310)
+..... .|..+.+
T Consensus 227 ~s~~~~~~~G~~i~~ 241 (248)
T TIGR01832 227 ASSASDYVNGYTLAV 241 (248)
T ss_pred cCccccCcCCcEEEe
Confidence 975322 3444444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-15 Score=122.35 Aligned_cols=193 Identities=15% Similarity=0.149 Sum_probs=124.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+... ...+.++.+|+.|++++.++++ ++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999999998421 1257889999999999888775 58
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||++|... ..++..+++++ ++.+ ..++|+ |+..... ..+....|+.
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~~ 146 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFA------VTRNAAAYVT 146 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhcc------CCCCCchhhh
Confidence 99999998632 23334444444 3344 467776 5533221 1234578999
Q ss_pred HHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCC-CCCC--CCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 134 VKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGA-AAPP--RDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 134 ~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+|...+.+.+. ..+++..++||.+...+......... .... ......+........+..++|+|++++.++
T Consensus 147 sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~ 226 (258)
T PRK06398 147 SKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA 226 (258)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHc
Confidence 99999888764 13778888999886654322111000 0000 000000011111124667899999999988
Q ss_pred cCC--ccCCceEEEc
Q 021596 205 DDP--RTLNKNLYIQ 217 (310)
Q Consensus 205 ~~~--~~~~~~~~~~ 217 (310)
... ...|..+.+.
T Consensus 227 s~~~~~~~G~~i~~d 241 (258)
T PRK06398 227 SDLASFITGECVTVD 241 (258)
T ss_pred CcccCCCCCcEEEEC
Confidence 653 2245556554
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.1e-15 Score=122.84 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=125.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ...+.++.+|+.|.+++.++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA---ADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999998887763211 111222332 2347889999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+|||+++... ..+..++++++.+.- ...++++ |+.+... ..|....|+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------~~~~~~~Y~~ 155 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL------PLPGYGPYAA 155 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC------CCCCCchhHH
Confidence 5899999998632 344455666665431 1236666 4433221 1234578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+++. .+++++.++||++...+....... .....+........+.+++|+++++..++.+
T Consensus 156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 228 (245)
T PRK12937 156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-------EQIDQLAGLAPLERLGTPEEIAAAVAFLAGP 228 (245)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-------HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999887754 368888999988765432111000 0000000011112356789999999988865
Q ss_pred Cc--cCCceEEEc
Q 021596 207 PR--TLNKNLYIQ 217 (310)
Q Consensus 207 ~~--~~~~~~~~~ 217 (310)
+. ..|..+++.
T Consensus 229 ~~~~~~g~~~~~~ 241 (245)
T PRK12937 229 DGAWVNGQVLRVN 241 (245)
T ss_pred cccCccccEEEeC
Confidence 42 235555553
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.4e-15 Score=122.02 Aligned_cols=195 Identities=12% Similarity=0.096 Sum_probs=123.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.. +... ...+ ...+.++.+|+.|.+++.++++
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~-----~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRE-----RGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHH-----HHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999988732 2211 1122 2457889999999988866554
Q ss_pred CCCEEEEcccchh---------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL---------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+++... ..++.++++++... .+..++|. |+..... ..+....|
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------~~~~~~~Y 157 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------SEPDTEAY 157 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------CCCCCcch
Confidence 4799999998642 44566777777531 11245555 5433221 11234679
Q ss_pred HHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 132 YDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 132 ~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+.+|...+.+.+. .++++..++|+.+.+.......... . .... ..-.....+.+++|+|.++..++.
T Consensus 158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~---~-~~~~---~~~~~~~~~~~~~~va~~~~~l~~ 230 (255)
T PRK05717 158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEP---L-SEAD---HAQHPAGRVGTVEDVAAMVAWLLS 230 (255)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchH---H-HHHH---hhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999887764 2477888899988765321110000 0 0000 000011246788999999988886
Q ss_pred CCc--cCCceEEEc
Q 021596 206 DPR--TLNKNLYIQ 217 (310)
Q Consensus 206 ~~~--~~~~~~~~~ 217 (310)
... ..|..+.+.
T Consensus 231 ~~~~~~~g~~~~~~ 244 (255)
T PRK05717 231 RQAGFVTGQEFVVD 244 (255)
T ss_pred chhcCccCcEEEEC
Confidence 432 235555553
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.9e-15 Score=122.56 Aligned_cols=197 Identities=17% Similarity=0.233 Sum_probs=127.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+... .......+. ...+.++.+|+.|.+++.++++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT----LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999999999998321 111222332 2347889999999999887776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHH----HHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKII----AAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~----~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+..++. +.+.+.+ ..++|+ |+..... ..+....
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~------~~~~~~~ 159 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQV------ARAGDAV 159 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhcc------CCCCccH
Confidence 4699999998642 22223344 4444455 567776 4433211 1223568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+++. .++++..++|+.+........... ..... ..........+++++|++.+++.+
T Consensus 160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~a~~~~~l 233 (256)
T PRK06124 160 YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD----PAVGP--WLAQRTPLGRWGRPEEIAGAAVFL 233 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC----hHHHH--HHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999998877653 478999999998877643221110 00000 000001112478899999999999
Q ss_pred hcCCcc--CCceEEEc
Q 021596 204 VDDPRT--LNKNLYIQ 217 (310)
Q Consensus 204 l~~~~~--~~~~~~~~ 217 (310)
+.++.. .|+.+.+.
T Consensus 234 ~~~~~~~~~G~~i~~d 249 (256)
T PRK06124 234 ASPAASYVNGHVLAVD 249 (256)
T ss_pred cCcccCCcCCCEEEEC
Confidence 976532 35555553
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.4e-15 Score=126.43 Aligned_cols=192 Identities=16% Similarity=0.115 Sum_probs=123.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++|+||||+|+||.++++.|+++|++|+++.|+. .+.. ....+ .++.++.+|+.|.+++.++++
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~-----~~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRP-----DVAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 37899999999999999999999999999999983 2221 11222 248899999999999887764
Q ss_pred CCCEEEEcccchh---------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCcc---ccC---CCCCCc
Q 021596 76 QVDVVISTVGHAL---------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVD---RAH---GAVEPA 127 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~---~~~---~~~~~~ 127 (310)
++|++||+||... ...+..++.++++.+ ..++|+ |+.+.... ..+ ....+.
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 177 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDK 177 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCCh
Confidence 5899999998532 122455666666665 467776 54332110 000 011223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCcee--EeeccchHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKA--VYNKEDDIAT 198 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~D~a~ 198 (310)
...|+.+|...+.+.+. .|++++.++||.+.+++...+.... ... ........... .+..++|+|.
T Consensus 178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~a~ 252 (315)
T PRK06196 178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE---QVA--LGWVDEHGNPIDPGFKTPAQGAA 252 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh---hhh--hhhhhhhhhhhhhhcCCHhHHHH
Confidence 56799999998876542 4799999999999877543221100 000 00000000011 2467899999
Q ss_pred HHHHHhcCCc
Q 021596 199 YTIKAVDDPR 208 (310)
Q Consensus 199 ~~~~~l~~~~ 208 (310)
.++.++..+.
T Consensus 253 ~~~~l~~~~~ 262 (315)
T PRK06196 253 TQVWAATSPQ 262 (315)
T ss_pred HHHHHhcCCc
Confidence 9999887653
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.9e-15 Score=122.90 Aligned_cols=198 Identities=13% Similarity=0.100 Sum_probs=125.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||+|+||.++++.|+++|++|.++.|+.... .....+.+. ...+.++.+|+.|++++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEG---AKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHH---HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37999999999999999999999999998887653211 111122232 2347889999999998877765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+...+++++... ++-.++|+ |+.... ...+....
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------~~~~~~~~ 152 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------TPLPGASA 152 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc------CCCCCcch
Confidence 5899999998632 33445555655432 21246666 543321 11223568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+++. .+++++.++||.+........... ...... .. -....+.+++|++.++..+
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~~~~~~--~~--~~~~~~~~~~dva~~~~~l 224 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD----VKPDSR--PG--IPLGRPGDTHEIASLVAWL 224 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChH----HHHHHH--hc--CCCCCCCCHHHHHHHHHHH
Confidence 99999998877653 478899999998876542211000 000000 00 0011356789999999888
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.... ..|..+.+.|
T Consensus 225 ~~~~~~~~~G~~~~~dg 241 (256)
T PRK12743 225 CSEGASYTTGQSLIVDG 241 (256)
T ss_pred hCccccCcCCcEEEECC
Confidence 86542 2355555543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-15 Score=122.88 Aligned_cols=173 Identities=17% Similarity=0.197 Sum_probs=117.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
++++||||+|+||+++++.|+++|++|++++|+.. +.+.+ ..+. ...++++.+|++|.+++.++++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTD-----RLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999832 22111 1121 2357889999999998877665
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||++|... ..+..++++++ ++.+ ..++|+ |+...... .....
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~ 151 (248)
T PRK08251 78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRG-----LPGVK 151 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccC-----CCCCc
Confidence 5899999998532 22233344443 4455 667776 54332211 11124
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .+++++.++||++.+...... +. ....++.+|.++.++
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~----------~~~~~~~~~~a~~i~ 212 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA---------KS----------TPFMVDTETGVKALV 212 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc---------cc----------CCccCCHHHHHHHHH
Confidence 6799999998877643 368889999998865432110 00 013577899999999
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
+.++..
T Consensus 213 ~~~~~~ 218 (248)
T PRK08251 213 KAIEKE 218 (248)
T ss_pred HHHhcC
Confidence 999754
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.6e-15 Score=117.13 Aligned_cols=233 Identities=17% Similarity=0.198 Sum_probs=157.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh----hcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----KNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
+.-||||-||.=|+.|++.|+.+|++|.++.|+.++-+..+.+++-.- ......+.-+|++|...+.+++. +++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 467999999999999999999999999999999877655444332111 11236788999999999999988 789
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcC---CccEEccCC---CCCC----ccccCCCCCCcchhhHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAG---NVTRFFPSE---FGND----VDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~---~v~~~v~s~---~~~~----~~~~~~~~~~~~~~y~~ 133 (310)
-|+|+++... ..++..+++|.+.++ +|+.+-.|+ ||.. ..+.+ |+.| .++|+.
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~T-PFyP-RSPYa~ 186 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETT-PFYP-RSPYAA 186 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCC-CCCC-CChhHH
Confidence 9999998765 677899999999886 232232232 6642 22233 5555 789988
Q ss_pred HHHHHHHHH----HHcCCCEEEEecceec--------cccccccCCCCCCC--CCCCeEEEecCCCceeEeeccchHHHH
Q 021596 134 VKARIRRAV----EAEGIPYTYVESYCFD--------GYFLPNLLQPGAAA--PPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 134 ~K~~~e~~l----~~~~~~~~i~rp~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
+|...-.++ +++++= ...|+.+ ++|...-+...+.. +....-...|+-+..++|-+..|-+++
T Consensus 187 aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEA 263 (376)
T KOG1372|consen 187 AKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEA 263 (376)
T ss_pred hhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHH
Confidence 887764322 222221 1122222 22322211111111 122234556777888999999999999
Q ss_pred HHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 200 TIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 200 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
+..+|.++.. ..|-+. .++..|.+|+++.-....|+.+.+.--
T Consensus 264 MW~mLQ~d~P--dDfViA-Tge~hsVrEF~~~aF~~ig~~l~Weg~ 306 (376)
T KOG1372|consen 264 MWLMLQQDSP--DDFVIA-TGEQHSVREFCNLAFAEIGEVLNWEGE 306 (376)
T ss_pred HHHHHhcCCC--CceEEe-cCCcccHHHHHHHHHHhhCcEEeeccc
Confidence 9999987642 334444 567999999999999999876655533
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-14 Score=124.86 Aligned_cols=234 Identities=16% Similarity=0.216 Sum_probs=156.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCchh-------hHhHhhhc------CCcEEEEccCCCH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKS-------QLLDHFKN------LGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~-------~~~~~l~~------~~~~~v~~D~~d~ 67 (310)
.++|+|||||||+|+-+++.|+... .+++.+.|...+.++..- +..+.+.. ..+..+.||+.++
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 4799999999999999999999864 368899998665421110 11111111 3467788998753
Q ss_pred ------HHHHHHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC-CCC------------
Q 021596 68 ------ESLVNAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE-FGN------------ 115 (310)
Q Consensus 68 ------~~~~~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~-~~~------------ 115 (310)
.++..+.+.+|+|||+|+... ..+++++++.|++..+.+-+++ |+ |..
T Consensus 92 ~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~ 171 (467)
T KOG1221|consen 92 DLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYP 171 (467)
T ss_pred ccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccC
Confidence 556666778999999999765 7889999999999877778887 32 322
Q ss_pred -Cc----cc---cC-------------CCCCCcchhhHHHHHHHHHHHHH--cCCCEEEEecceecccccc---ccCCCC
Q 021596 116 -DV----DR---AH-------------GAVEPAKSVYYDVKARIRRAVEA--EGIPYTYVESYCFDGYFLP---NLLQPG 169 (310)
Q Consensus 116 -~~----~~---~~-------------~~~~~~~~~y~~~K~~~e~~l~~--~~~~~~i~rp~~~~~~~~~---~~~~~~ 169 (310)
.. +. .+ .-...+++.|..+|+.+|+.+.+ .++|.+|+||+++...+.. .+....
T Consensus 172 ~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~ 251 (467)
T KOG1221|consen 172 MPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNL 251 (467)
T ss_pred ccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccC
Confidence 00 00 00 00011356677899999999976 5799999999998764322 111110
Q ss_pred C------CC-CCCCeEEEecCCCceeEeeccchHHHHHHHHh-cCCcc----CCceEEEc-CCCCccCHHHHHHHHHHHh
Q 021596 170 A------AA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAV-DDPRT----LNKNLYIQ-PPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 170 ~------~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l-~~~~~----~~~~~~~~-~~~~~~s~~e~~~~~~~~~ 236 (310)
. .. -++..-.+..+.+...++|.+|.++.++..+. ..... ...+||++ +..+++++.++.+...+..
T Consensus 252 ~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~ 331 (467)
T KOG1221|consen 252 NGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYF 331 (467)
T ss_pred CCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhc
Confidence 0 00 11112234456677789999999999887666 11111 23588877 3447899999999988886
Q ss_pred C
Q 021596 237 G 237 (310)
Q Consensus 237 g 237 (310)
.
T Consensus 332 ~ 332 (467)
T KOG1221|consen 332 E 332 (467)
T ss_pred c
Confidence 5
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=123.06 Aligned_cols=175 Identities=17% Similarity=0.203 Sum_probs=120.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|+||.++++.|+++|++|++++|+. ++.+ ..+.+.. ..+.++.+|+.|.+++.++++
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~-----~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARRE-----DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 7899999999999999999999999999999983 2221 2222322 346788999999999888877
Q ss_pred -CCCEEEEcccchh---------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL---------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~---------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||++|... ..+ ...++..+++.+ ..++|+ |+.+... ...|..
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~p~~ 189 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLS-----EASPLF 189 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC-----CCCCCc
Confidence 6899999998542 111 223344445565 567776 5543221 112335
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|+..+.+.+. .+++++.++||.+-........ . . . ....++++++|+.+.
T Consensus 190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~--------~----~--~---~~~~~~pe~vA~~~~ 252 (293)
T PRK05866 190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK--------A----Y--D---GLPALTADEAAEWMV 252 (293)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc--------c----c--c---CCCCCCHHHHHHHHH
Confidence 6899999998877653 4788999999877655332100 0 0 0 012468899999999
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
..++.+
T Consensus 253 ~~~~~~ 258 (293)
T PRK05866 253 TAARTR 258 (293)
T ss_pred HHHhcC
Confidence 999754
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-15 Score=123.59 Aligned_cols=202 Identities=17% Similarity=0.186 Sum_probs=125.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ......+.+.. ..+.++.+|+.|.+++.++++
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISP-----EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999973 22222233322 346788999999999888766
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CC-CCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SE-FGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... +.+...+++++. +.+ ..++|+ |+ .+.. ...+...
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~~ 153 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDM------VADPGET 153 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcc------cCCCCcc
Confidence 5799999998632 233445555544 333 456665 44 2211 1122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++..++||.+.+..............................+..++|+|+++..
T Consensus 154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~ 233 (263)
T PRK08226 154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAF 233 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHH
Confidence 799999998887753 3788999999988776433221100000000000000001111235688999999888
Q ss_pred HhcCC--ccCCceEEEc
Q 021596 203 AVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~--~~~~~~~~~~ 217 (310)
++... ...|+.+.+.
T Consensus 234 l~~~~~~~~~g~~i~~d 250 (263)
T PRK08226 234 LASDESSYLTGTQNVID 250 (263)
T ss_pred HcCchhcCCcCceEeEC
Confidence 87543 2234555554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.7e-15 Score=125.10 Aligned_cols=198 Identities=13% Similarity=0.168 Sum_probs=128.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+|+||||+|+||.++++.|+++|++|+++.|+.... .......+.. ..+.++.+|+.|.+++.++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHED---ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999874321 1112222322 347789999999998888775
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|+|||+++... ..+..++++++... ....++|+ |+...... .+....|+
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~------~~~~~~Y~ 196 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG------NETLIDYS 196 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC------CCCcchhH
Confidence 5899999998631 34556667776542 11246665 44322211 12245799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+.......... ...............+.+++|+|+++..++.
T Consensus 197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~ 269 (290)
T PRK06701 197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-------EEKVSQFGSNTPMQRPGQPEELAPAYVFLAS 269 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-------HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC
Confidence 999998877653 47899999998877654321100 0000001111122357889999999999997
Q ss_pred CCc--cCCceEEEc
Q 021596 206 DPR--TLNKNLYIQ 217 (310)
Q Consensus 206 ~~~--~~~~~~~~~ 217 (310)
+.. ..+..+++.
T Consensus 270 ~~~~~~~G~~i~id 283 (290)
T PRK06701 270 PDSSYITGQMLHVN 283 (290)
T ss_pred cccCCccCcEEEeC
Confidence 642 245666664
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=121.77 Aligned_cols=196 Identities=16% Similarity=0.165 Sum_probs=126.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|.||.++++.|+++|++|++++|+.++. ....+.+.. ..+.++.+|+.|.+++.++++
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL----DQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG 82 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999999999999984321 112233322 347788999999998888776
Q ss_pred CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCC-CCCccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEF-GNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~-~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ....+.++..+++.+ ..++|+ |+. +.. ...+...
T Consensus 83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~------~~~~~~~ 155 (254)
T PRK07478 83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHT------AGFPGMA 155 (254)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhc------cCCCCcc
Confidence 6899999998531 122334455555555 456766 443 221 1122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++..++||++...+....... ..... ..........+..++|+|++++.
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~va~~~~~ 229 (254)
T PRK07478 156 AYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT----PEALA--FVAGLHALKRMAQPEEIAQAALF 229 (254)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC----HHHHH--HHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999999877653 368899999998866532211100 00000 00000011246688999999999
Q ss_pred HhcCCc--cCCceEEEc
Q 021596 203 AVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~ 217 (310)
++.++. ..|..+.+.
T Consensus 230 l~s~~~~~~~G~~~~~d 246 (254)
T PRK07478 230 LASDAASFVTGTALLVD 246 (254)
T ss_pred HcCchhcCCCCCeEEeC
Confidence 886542 235555554
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-15 Score=123.04 Aligned_cols=196 Identities=16% Similarity=0.164 Sum_probs=127.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|++|+++++.|.++|++|+++.|+... ........+. ...+.++.+|+.|.+++.++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 699999999999999999999999999999998421 0111112221 2347889999999998888765
Q ss_pred CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+++... +.+. ..+++++++.+ ..++|+ |+.+... ..+....|
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~------~~~~~~~Y 152 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLK------GQFGQTNY 152 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhcc------CCCCChHH
Confidence 4899999998542 2223 33455666666 677777 5543321 11235679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+++. .++++++++|+.+.+......... .............+..++|+++++..++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~va~~~~~l~ 224 (245)
T PRK12824 153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE--------VLQSIVNQIPMKRLGTPEEIAAAVAFLV 224 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 9999988776643 478899999998876532211100 0000000111224667899999998888
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.... ..|+.+++.+
T Consensus 225 ~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 225 SEAAGFITGETISING 240 (245)
T ss_pred CccccCccCcEEEECC
Confidence 5432 2467777753
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-15 Score=122.10 Aligned_cols=196 Identities=15% Similarity=0.142 Sum_probs=126.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||.++++.|+++|++|+++.|+ .+ .....+.+. ...+.++.+|+.|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TN----WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999999997 21 111112222 2357889999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... ..+ ++.++..+++.+ ..++|+ |+..... ..+....
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 162 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQ------GGKFVPA 162 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhcc------CCCCchh
Confidence 5899999998632 222 233444555555 456666 4432211 1223568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||.+........... ........ ..-....+..++|+|..+..+
T Consensus 163 Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~dva~~~~~l 236 (258)
T PRK06935 163 YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----KNRNDEIL-KRIPAGRWGEPDDLMGAAVFL 236 (258)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----hHHHHHHH-hcCCCCCCCCHHHHHHHHHHH
Confidence 99999999887753 478999999998876543211100 00000000 000112477889999999998
Q ss_pred hcCCc--cCCceEEEc
Q 021596 204 VDDPR--TLNKNLYIQ 217 (310)
Q Consensus 204 l~~~~--~~~~~~~~~ 217 (310)
+.+.. ..|.++.+.
T Consensus 237 ~s~~~~~~~G~~i~~d 252 (258)
T PRK06935 237 ASRASDYVNGHILAVD 252 (258)
T ss_pred cChhhcCCCCCEEEEC
Confidence 86432 245556554
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=120.60 Aligned_cols=193 Identities=14% Similarity=0.132 Sum_probs=127.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+.+++.|+++|++|+++.|+.. .. ....++++++|+.|.+++.++++ ++
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~----------~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL----------TQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh----------hh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999830 11 13457889999999999988876 37
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|+|||+++... ......+++++. +.+ ..++|+ |+.+... ..+....|+.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~------~~~~~~~Y~~ 150 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV------PRIGMAAYGA 150 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc------CCCCCchhHH
Confidence 99999998642 233344555553 344 456766 5543221 1223578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe----EEEecCCCceeEeeccchHHHHHHH
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK----VVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+|...+.+.+. .++++..++|+.+.+.....+..... ..... ............+++++|+|++++.
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDED--GEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchh--hhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH
Confidence 99998887743 57899999999987764332211100 00000 0000111122468899999999999
Q ss_pred HhcCC--ccCCceEEEc
Q 021596 203 AVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~--~~~~~~~~~~ 217 (310)
++.+. ...+..+.+.
T Consensus 229 l~~~~~~~~~g~~i~~~ 245 (252)
T PRK08220 229 LASDLASHITLQDIVVD 245 (252)
T ss_pred HhcchhcCccCcEEEEC
Confidence 88643 2234545554
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.8e-15 Score=122.03 Aligned_cols=189 Identities=16% Similarity=0.151 Sum_probs=119.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
++|+||||+|+||+++++.|+++|++|+++.|+. .+.. ..+.+ ...+.++++|+.|.+++..+++ +
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDP-----ASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 6999999999999999999999999999999873 2221 11122 2357788999999887766544 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEccCCCCCCccccCCCCCCcchhhHHHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+|+|||+++... ..++.++++++... ...+.++.++..... ..+....|+.+|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~------~~~~~~~Y~~sK 154 (249)
T PRK06500 81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI------GMPNSSVYAASK 154 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc------CCCCccHHHHHH
Confidence 899999998532 44556777777642 212333334432211 112357899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
...+.+++. .++++.+++|+.+.+.+......... ................-+.+++|+|+++..++.++
T Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 231 (249)
T PRK06500 155 AALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEA--TLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDE 231 (249)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCcc--chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999888843 37899999999887754321100000 00000000000001112457899999999988643
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-14 Score=120.08 Aligned_cols=201 Identities=16% Similarity=0.170 Sum_probs=123.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||.++++.|+++|++|+++.|+.... ......+.. ..+.++++|+.|++++.++++
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA----QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 7899999999999999999999999999999984221 112223322 357789999999998887776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHH----HHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKII----AAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~----~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..++..++ +.+++.+.-.++|+ |+..... ..+....|
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~~~~~~Y 152 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV------GNPELAVY 152 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc------CCCCCchh
Confidence 5899999998642 22222333 33333321235555 5543221 12235679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEE-----EecCCCceeEeeccchHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV-----ILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~D~a~~ 199 (310)
+.+|...+.+.+. .|++++.++||++.............. ....... .... -....+..++|+|.+
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~ 230 (256)
T PRK08643 153 SSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGE-NAGKPDEWGMEQFAKD-ITLGRLSEPEDVANC 230 (256)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhcc-ccCCCchHHHHHHhcc-CCCCCCcCHHHHHHH
Confidence 9999998876653 478999999998876543321110000 0000000 0000 011235678999999
Q ss_pred HHHHhcCC--ccCCceEEEc
Q 021596 200 TIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~--~~~~~~~~~~ 217 (310)
+..++.+. ...|..+.+.
T Consensus 231 ~~~L~~~~~~~~~G~~i~vd 250 (256)
T PRK08643 231 VSFLAGPDSDYITGQTIIVD 250 (256)
T ss_pred HHHHhCccccCccCcEEEeC
Confidence 99988653 2345555553
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=121.90 Aligned_cols=198 Identities=16% Similarity=0.225 Sum_probs=126.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ....+.. ..+.++.+|++|++++.++++
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA-----EELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999999999999973 2222 1122222 346789999999999976664
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-----CCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-----GNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-----~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..++.++++++... + ..++|+ |+........ +..+..
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~--~~~~~~ 163 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNP--PEVMDT 163 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC--ccccCc
Confidence 5899999998531 34566777776543 4 567776 4432211110 111234
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|+..+.+++. .++++..++|+.+............ .. . .. .......+...+|++.++.
T Consensus 164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~----~~-~--~~-~~~~~~~~~~~~~va~~~~ 235 (259)
T PRK08213 164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERL----GE-D--LL-AHTPLGRLGDDEDLKGAAL 235 (259)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHH----HH-H--HH-hcCCCCCCcCHHHHHHHHH
Confidence 6899999999888764 3788899999887654322211100 00 0 00 0011123456789999988
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.... ..|..+.+.
T Consensus 236 ~l~~~~~~~~~G~~~~~~ 253 (259)
T PRK08213 236 LLASDASKHITGQILAVD 253 (259)
T ss_pred HHhCccccCccCCEEEEC
Confidence 8885432 245666654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-14 Score=118.60 Aligned_cols=167 Identities=19% Similarity=0.173 Sum_probs=119.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~ 79 (310)
.++|+||||+|++|+++++.|+++|+ +|+++.|+.+ +. .. ...++.++.+|+.|.+++.++++ .+|+
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~-----~~---~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE-----SV---TD-LGPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChh-----hh---hh-cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 36899999999999999999999998 9999999843 22 11 23568899999999999998887 4899
Q ss_pred EEEcccc-hh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 80 VISTVGH-AL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 80 Vi~~a~~-~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
|||+++. .. .....++++++. ..+ ..++++ |+..... + .+....|+.+
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~-----~-~~~~~~y~~s 149 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWV-----N-FPNLGTYSAS 149 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcc-----C-CCCchHhHHH
Confidence 9999987 21 233445555543 344 567776 4433211 1 2235689999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|...+.+.+. .+++++++||+.+........ ....+..+|+++.++..+..+
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~---------------------~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL---------------------DAPKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC---------------------CcCCCCHHHHHHHHHHHHhCC
Confidence 9999877653 478999999987754321100 012577889999999888754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-14 Score=118.97 Aligned_cols=173 Identities=16% Similarity=0.116 Sum_probs=121.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC----CCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ----VDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~----~d~ 79 (310)
|++|+||||+|+||.++++.|+++|++|++++|+ +++.+.+... ...+.++.+|++|.+++.++++. +|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRN-----QSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 4689999999999999999999999999999998 3333222111 23588899999999999998874 688
Q ss_pred EEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHH
Q 021596 80 VISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 80 Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
++|+++... ..++.++++++... + -.++|. |+..... ..+....|+.+|..
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~~Y~asK~a 147 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASEL------ALPRAEAYGASKAA 147 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhcc------CCCCCchhhHHHHH
Confidence 888887421 34456777777652 2 234554 4433221 12235689999999
Q ss_pred HHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 138 IRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 138 ~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+.+.+ ..+++++.++||.+.+...... . . .. -..+.++|+|+.+...++.+
T Consensus 148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---------~--~------~~-~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---------T--F------AM-PMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---------C--C------CC-CcccCHHHHHHHHHHHHhcC
Confidence 988764 3589999999998876532210 0 0 00 02468899999999999765
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=123.48 Aligned_cols=198 Identities=14% Similarity=0.175 Sum_probs=125.1
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhc------
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+|+||||+|+||.++++.|+++|++|+++.|+.... .....+.+.. ..+..+.+|+.|.+++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAG---LDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 489999999999999999999999999999973211 1111222221 123467899999999887765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ...+.++++++++.+ .+++|+ |+..... ..+....
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~------~~~~~~~ 150 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFK------AEPDYTA 150 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhcc------CCCCCch
Confidence 5799999998643 124567778887776 678777 4433221 1123567
Q ss_pred hHHHHHHHHHHHHH-------c--CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------E--GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~--~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
|+.+|...+.+.+. . ++++..++|+++.+.......... .................+.+++|+|.++.
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 227 (251)
T PRK07069 151 YNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL---GEEEATRKLARGVPLGRLGEPDDVAHAVL 227 (251)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc---cchhHHHHHhccCCCCCCcCHHHHHHHHH
Confidence 99999998877753 2 377888899988776543221110 00000000111111124567899999999
Q ss_pred HHhcCCc--cCCceEEE
Q 021596 202 KAVDDPR--TLNKNLYI 216 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~ 216 (310)
.++.++. ..|..+.+
T Consensus 228 ~l~~~~~~~~~g~~i~~ 244 (251)
T PRK07069 228 YLASDESRFVTGAELVI 244 (251)
T ss_pred HHcCccccCccCCEEEE
Confidence 8776542 23444444
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=120.00 Aligned_cols=196 Identities=17% Similarity=0.205 Sum_probs=125.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.+.++||||+|+||+++++.|+++|++|++..++.. +......+.+... .+..+.+|+.|.+++.++++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999887654322 2222233333333 35667899999998887765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ...+..+++.+++.+ ..++|+ |+..... ..+....
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~~ 152 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK------GQFGQTN 152 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccC------CCCCChh
Confidence 5899999998642 112344555566666 667776 4432211 1223568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++|+.+.+......... .............+..++|++.++..+
T Consensus 153 y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~l 224 (246)
T PRK12938 153 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD--------VLEKIVATIPVRRLGSPDEIGSIVAWL 224 (246)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH--------HHHHHHhcCCccCCcCHHHHHHHHHHH
Confidence 99999987776543 478899999998876543321110 000000111223466789999999988
Q ss_pred hcCC--ccCCceEEEc
Q 021596 204 VDDP--RTLNKNLYIQ 217 (310)
Q Consensus 204 l~~~--~~~~~~~~~~ 217 (310)
+.++ ...+..+.+.
T Consensus 225 ~~~~~~~~~g~~~~~~ 240 (246)
T PRK12938 225 ASEESGFSTGADFSLN 240 (246)
T ss_pred cCcccCCccCcEEEEC
Confidence 8653 2245555554
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=122.50 Aligned_cols=202 Identities=18% Similarity=0.202 Sum_probs=125.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... ....+.+.. .++.++++|+.|.+++.++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLG----QNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 36899999999999999999999999999999873211 111222222 357899999999999988876
Q ss_pred CCCEEEEcccchh---------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL---------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ..++.++++++.. .+ -.+++. ++...... .+...
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~------~~~~~ 166 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIG------GLGPH 166 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhccc------CCCCc
Confidence 5899999998531 3334455555543 22 234444 43322111 12245
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE----EEecCCC-ceeEeeccchHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV----VILGDGN-PKAVYNKEDDIA 197 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~i~~~D~a 197 (310)
.|+.+|...+.+.+. .++++..++||.+............. ...... ....... .....++++|+|
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~dva 244 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDE--RTEDALAGFRAFAGKNANLKGVELTVDDVA 244 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccccc--chhhhhhhhHHHhhcCCCCcCCCCCHHHHH
Confidence 799999999888764 37888999999886653211110000 000000 0000000 012347899999
Q ss_pred HHHHHHhcCCc--cCCceEEEcC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.++..++.... ..|..+++.|
T Consensus 245 ~~~~~l~s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 245 NAVLFLASDEARYISGLNLMIDG 267 (280)
T ss_pred HHHHhhcCcccccccCcEEEECC
Confidence 99999886532 2356667753
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-14 Score=119.93 Aligned_cols=197 Identities=12% Similarity=0.159 Sum_probs=126.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||.++++.|+++|++|+++.|+... ......++.. ..+..+.+|+.|.+++.++++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER----AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH----HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999999998321 1122233332 246778899999999888765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..+...+++++. +.+ ..++|+ |+..... + .+....
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~-~~~~~~ 157 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSEL-----G-RDTITP 157 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhcc-----C-CCCCcc
Confidence 4899999998532 222333444443 344 467776 5443211 1 123568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||++........... ... ............+..++|+|.++..+
T Consensus 158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-----~~~-~~~~~~~~p~~~~~~~~~va~~~~~l 231 (254)
T PRK08085 158 YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-----EAF-TAWLCKRTPAARWGDPQELIGAAVFL 231 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-----HHH-HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999888764 479999999998877643321110 000 00000111123467889999999888
Q ss_pred hcCC--ccCCceEEEc
Q 021596 204 VDDP--RTLNKNLYIQ 217 (310)
Q Consensus 204 l~~~--~~~~~~~~~~ 217 (310)
+.+. .-.|..+.+.
T Consensus 232 ~~~~~~~i~G~~i~~d 247 (254)
T PRK08085 232 SSKASDFVNGHLLFVD 247 (254)
T ss_pred hCccccCCcCCEEEEC
Confidence 8643 2235555554
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-14 Score=119.58 Aligned_cols=202 Identities=13% Similarity=0.088 Sum_probs=123.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|.+.++++||||+|+||.++++.|++.|++|.++.++.. .........+.. ..+..+.+|+.|.+++..+++
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK---EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD 77 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCH---HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence 444589999999999999999999999999988754321 111112223322 246678899999877654332
Q ss_pred ----------CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCC
Q 021596 76 ----------QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 ----------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|++||+||... +.++..+++++...- ...++|+ |+..... .
T Consensus 78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~ 151 (252)
T PRK12747 78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI------S 151 (252)
T ss_pred HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc------C
Confidence 5899999998532 333444555544321 1236666 4433221 1
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.+....|+.+|+..+.+.+. .++++..+.||++........... ..... ..........+.+++|+|
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~dva 225 (252)
T PRK12747 152 LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD----PMMKQ--YATTISAFNRLGEVEDIA 225 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC----HHHHH--HHHhcCcccCCCCHHHHH
Confidence 22356899999999877753 479999999998876643221110 00000 000001113477899999
Q ss_pred HHHHHHhcCCc--cCCceEEEc
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~ 217 (310)
.++..++.... ..|..+.+.
T Consensus 226 ~~~~~l~s~~~~~~~G~~i~vd 247 (252)
T PRK12747 226 DTAAFLASPDSRWVTGQLIDVS 247 (252)
T ss_pred HHHHHHcCccccCcCCcEEEec
Confidence 99999886432 235555554
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-14 Score=120.16 Aligned_cols=200 Identities=14% Similarity=0.158 Sum_probs=124.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||.++++.|+++|++|+++.|+ .. .......+.. ..+.++.+|+.|.+++.++++
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA----VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998 21 2222333332 247889999999998887765
Q ss_pred -CCCEEEEcccchh--------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL--------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ..+. +.++..+++.+ .++|+ |+..... ..+...
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~------~~~~~~ 152 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQA------ADLYRS 152 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcC------CCCCCc
Confidence 4799999998642 1111 23444444443 46665 5433221 112356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEE-EecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV-ILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|...+.+.+. .|+++..+.||.+............. ........ ..........+..++|+|+++.
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 231 (272)
T PRK08589 153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE-DEAGKTFRENQKWMTPLGRLGKPEEVAKLVV 231 (272)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch-hhHHHHHhhhhhccCCCCCCcCHHHHHHHHH
Confidence 899999999887764 47889999999887654332111000 00000000 0000001113567899999999
Q ss_pred HHhcCC--ccCCceEEEc
Q 021596 202 KAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~--~~~~~~~~~~ 217 (310)
.++.++ ...|+.+.+.
T Consensus 232 ~l~s~~~~~~~G~~i~vd 249 (272)
T PRK08589 232 FLASDDSSFITGETIRID 249 (272)
T ss_pred HHcCchhcCcCCCEEEEC
Confidence 988653 2245555554
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=121.47 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=126.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||.++++.|+++|++|++++|+.+. .....+.+. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL----AERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997321 112223332 2347789999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+++... ..+...+++++ ++.+ ..++|+ |+.... ...+..
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 155 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAF------KIIPGC 155 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhc------cCCCCc
Confidence 5899999998532 22333344443 3444 456776 443221 112235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|+..+.+.+. .|+++..++||++.......+.... ........... .......+..++|+|.+++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~-~~~~~~r~~~~~~va~~~~ 233 (260)
T PRK07063 156 FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-PDPAAARAETL-ALQPMKRIGRPEEVAMTAV 233 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-CChHHHHHHHH-hcCCCCCCCCHHHHHHHHH
Confidence 6799999999888754 4788999999988665432211100 00000000000 0001123567899999999
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.+.. ..|..+.+.
T Consensus 234 fl~s~~~~~itG~~i~vd 251 (260)
T PRK07063 234 FLASDEAPFINATCITID 251 (260)
T ss_pred HHcCccccccCCcEEEEC
Confidence 9886542 245555554
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-14 Score=120.88 Aligned_cols=198 Identities=12% Similarity=0.095 Sum_probs=121.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||++++++|+++|+.|+...++... ........+.. ..+.++.+|++|.+++.++++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRD---AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHH---HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999988877654211 11112222322 346789999999999888776
Q ss_pred CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC------CccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG------NVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~------~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... ..++.++++++...- +-.++|+ |+...... .....
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~ 154 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG-----SPGEY 154 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC-----CCCCc
Confidence 5899999998642 233445555654421 0124554 54332111 11112
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+++. .+++++++||+.+.+.+....... . ............-+.+++|+++++.
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~------~-~~~~~~~~~p~~~~~~~~d~a~~~~ 227 (248)
T PRK06123 155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP------G-RVDRVKAGIPMGRGGTAEEVARAIL 227 (248)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH------H-HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 4699999999887653 389999999999877642211000 0 0000000000011246899999999
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.... ..|+.+++.
T Consensus 228 ~l~~~~~~~~~g~~~~~~ 245 (248)
T PRK06123 228 WLLSDEASYTTGTFIDVS 245 (248)
T ss_pred HHhCccccCccCCEEeec
Confidence 9886542 245666664
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.8e-14 Score=118.28 Aligned_cols=199 Identities=14% Similarity=0.136 Sum_probs=124.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.+.. .....+.+.. ..+..+.+|+.|.+++.++++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG---LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999974311 1222333332 347788999999998887766
Q ss_pred -CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... ..+. +.++..+++.+ ..++|+ |+....... + .+....
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~-~~~~~~ 159 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVN---R-GLLQAH 159 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC---C-CCCcch
Confidence 4799999998642 2222 33444444544 456665 443221111 1 112467
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||++...+.... . ..... ...........+..++|++.+++.+
T Consensus 160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~-----~~~~~-~~~~~~~p~~r~~~~~dva~~~~~l 232 (254)
T PRK06114 160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-E-----MVHQT-KLFEEQTPMQRMAKVDEMVGPAVFL 232 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-c-----chHHH-HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999988877653 478999999998866543210 0 00000 0000001112356789999999998
Q ss_pred hcCCc--cCCceEEEc
Q 021596 204 VDDPR--TLNKNLYIQ 217 (310)
Q Consensus 204 l~~~~--~~~~~~~~~ 217 (310)
+.+.. -.|+++.+.
T Consensus 233 ~s~~~~~~tG~~i~~d 248 (254)
T PRK06114 233 LSDAASFCTGVDLLVD 248 (254)
T ss_pred cCccccCcCCceEEEC
Confidence 86532 235555554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-14 Score=119.90 Aligned_cols=197 Identities=17% Similarity=0.218 Sum_probs=124.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++|+||||+|+||+++++.|.++|++|+++.|+.... ....+.++.+|+.|.+++.++++ ++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999984311 13357889999999998776553 58
Q ss_pred CEEEEcccchh---------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 78 DVVISTVGHAL---------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 78 d~Vi~~a~~~~---------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
|+|||++|... ..+. +.+++.+++.+ ..++|+ |+..... +..+....|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~-----~~~~~~~~Y 152 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRL-----PLPESTTAY 152 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccC-----CCCCCcchh
Confidence 99999998421 1222 33445555555 456766 4433211 112235789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC----CCCCCCCeEEEe--cCCCceeEeeccchHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG----AAAPPRDKVVIL--GDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~i~~~D~a~ 198 (310)
+.+|..++.+.+. .++++..++||.+............ ..........+. -..-....+..++|+|+
T Consensus 153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~ 232 (260)
T PRK06523 153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence 9999998877653 4799999999998776432111000 000000000000 00001123567899999
Q ss_pred HHHHHhcCC--ccCCceEEEcC
Q 021596 199 YTIKAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~--~~~~~~~~~~~ 218 (310)
++..++.+. ...|+.+.+.|
T Consensus 233 ~~~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 233 LIAFLASDRAASITGTEYVIDG 254 (260)
T ss_pred HHHHHhCcccccccCceEEecC
Confidence 999998653 22456666654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=120.85 Aligned_cols=201 Identities=15% Similarity=0.185 Sum_probs=128.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||+|.||+++++.|+++|++|++++|+.. +.. ..+.+. ..++.++.+|+.|.+++.++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEE-----NLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 68999999999999999999999999999999832 221 122222 2357889999999999888776
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+++|+++... ...++.++..+++.+ ..++|+ |+.... ...|....
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~------~~~~~~~~ 156 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIK------EPIPNIAL 156 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCcccc------CCCCcchh
Confidence 4899999998532 223455666666665 567776 554322 11233567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC--CCC-CCeEEEecCCCceeEeeccchHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA--APP-RDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
|+.+|...+.+.+. .|+++..+.||++...+.......... ... ...............+..++|+|.++
T Consensus 157 y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v 236 (263)
T PRK08339 157 SNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLV 236 (263)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHH
Confidence 98999998877653 578899999998876543221100000 000 00000000001112467789999999
Q ss_pred HHHhcCC-c-cCCceEEEc
Q 021596 201 IKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~-~-~~~~~~~~~ 217 (310)
..++.+. . ..|..+.+.
T Consensus 237 ~fL~s~~~~~itG~~~~vd 255 (263)
T PRK08339 237 AFLASDLGSYINGAMIPVD 255 (263)
T ss_pred HHHhcchhcCccCceEEEC
Confidence 9988653 2 234555553
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.3e-15 Score=121.75 Aligned_cols=189 Identities=12% Similarity=0.081 Sum_probs=118.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV------ 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~------ 77 (310)
|++|+||||+|+||+.+++.|+++|++|++++|+..+ ....+......+++++.+|++|.+++.++++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK----ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH----HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 4699999999999999999999999999999997421 111111111346888999999999998877621
Q ss_pred -----CEEEEcccchh--------------------hh----hHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 78 -----DVVISTVGHAL--------------------LA----DQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 78 -----d~Vi~~a~~~~--------------------~~----~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
.+++|++|... .. ....++..+++.+..+++|+ |+.... ...+.
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~~~ 150 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK------NPYFG 150 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc------CCCCC
Confidence 16888887531 11 23444555554331356666 443221 12234
Q ss_pred chhhHHHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe---cCCCceeEeeccch
Q 021596 128 KSVYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL---GDGNPKAVYNKEDD 195 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D 195 (310)
...|+.+|...+.+.+. .++++..++||++..+........ ........ ........+.+++|
T Consensus 151 ~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d 225 (251)
T PRK06924 151 WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSS-----SKEDFTNLDRFITLKEEGKLLSPEY 225 (251)
T ss_pred cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhc-----CcccchHHHHHHHHhhcCCcCCHHH
Confidence 67899999999887752 357788889998876543211000 00000000 00000113688999
Q ss_pred HHHHHHHHhcCC
Q 021596 196 IATYTIKAVDDP 207 (310)
Q Consensus 196 ~a~~~~~~l~~~ 207 (310)
+|+.++.++.++
T Consensus 226 va~~~~~l~~~~ 237 (251)
T PRK06924 226 VAKALRNLLETE 237 (251)
T ss_pred HHHHHHHHHhcc
Confidence 999999999763
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=121.03 Aligned_cols=199 Identities=17% Similarity=0.199 Sum_probs=125.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.+.. ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG----EETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 37999999999999999999999999999999984321 11122222 2347889999999998888765
Q ss_pred -CCCEEEEcccchh--------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL--------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... .... ..++..+.+.+ ..++++ |+..... + .+...
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~-----~-~~~~~ 155 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLG-----A-APKMS 155 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcc-----C-CCCCc
Confidence 4699999998531 1112 23333444444 456666 4433221 1 12356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++..+.||.+........... .......+.. ......+..++|+++.+..
T Consensus 156 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~p~~ia~~~~~ 230 (253)
T PRK06172 156 IYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA----DPRKAEFAAA-MHPVGRIGKVEEVASAVLY 230 (253)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc----ChHHHHHHhc-cCCCCCccCHHHHHHHHHH
Confidence 899999998887753 368888999998866543322110 0000000000 0111235688999999999
Q ss_pred HhcCC--ccCCceEEEcC
Q 021596 203 AVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~--~~~~~~~~~~~ 218 (310)
++.+. ...|+.+.+.+
T Consensus 231 l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 231 LCSDGASFTTGHALMVDG 248 (253)
T ss_pred HhCccccCcCCcEEEECC
Confidence 98653 23466666643
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=118.80 Aligned_cols=197 Identities=14% Similarity=0.110 Sum_probs=125.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||.++++.|+++|++|+++.|+.... ....+.+.. ..+..+++|+.|.+++.++++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC----QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999973211 112233322 246788999999998877665
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHH----HHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKII----AAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~----~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ..+...++ +.+++.+ ..++++ |+.... ...+...
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------~~~~~~~ 156 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGV------SPGDFQG 156 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhc------CCCCCCc
Confidence 4899999998421 22333333 4445544 566665 442221 1123356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|+.++.+.+. .|+++..+.||.+...+....... ..........-....+..++|+|+.+..
T Consensus 157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~~ 230 (252)
T PRK07035 157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN------DAILKQALAHIPLRRHAEPSEMAGAVLY 230 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC------HHHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence 899999999988764 378899999998876543322111 0000000000011246678999999999
Q ss_pred HhcCCc--cCCceEEEc
Q 021596 203 AVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~ 217 (310)
++.+.. ..|..+.+-
T Consensus 231 l~~~~~~~~~g~~~~~d 247 (252)
T PRK07035 231 LASDASSYTTGECLNVD 247 (252)
T ss_pred HhCccccCccCCEEEeC
Confidence 886542 245555553
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=119.64 Aligned_cols=193 Identities=18% Similarity=0.226 Sum_probs=123.4
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc-------CC
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
|+|||++|+||+++++.|+++|++|+++.|+... ........+... .+.++.+|++|.+++.++++ ++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEE---GAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchh---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999999999987421 111122233322 36789999999999888775 46
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|+|||+++... ..+..++++++.. .+ .+++++ |+.+.... .+....|+.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g------~~~~~~y~~ 150 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMG------NAGQANYAA 150 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCC------CCCCchhHH
Confidence 99999998642 3334556666654 34 557776 44322211 123467999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .++.+++++|+.+.+......... . ... ... ......+.+++|+++++..++..
T Consensus 151 ~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~----~-~~~--~~~-~~~~~~~~~~~~~a~~~~~~~~~ 222 (239)
T TIGR01830 151 SKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEK----V-KKK--ILS-QIPLGRFGTPEEVANAVAFLASD 222 (239)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChH----H-HHH--HHh-cCCcCCCcCHHHHHHHHHHHhCc
Confidence 99987766543 478899999987755432111000 0 000 000 01112366889999999988854
Q ss_pred C--ccCCceEEEc
Q 021596 207 P--RTLNKNLYIQ 217 (310)
Q Consensus 207 ~--~~~~~~~~~~ 217 (310)
. ...++.+++.
T Consensus 223 ~~~~~~g~~~~~~ 235 (239)
T TIGR01830 223 EASYITGQVIHVD 235 (239)
T ss_pred ccCCcCCCEEEeC
Confidence 3 2356666663
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.9e-14 Score=121.57 Aligned_cols=182 Identities=19% Similarity=0.231 Sum_probs=120.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|.||+++++.|+++|++|+++.|+. .+. +..+.+.. ..+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~-----~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDE-----EALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999983 222 12233332 346678999999999888774
Q ss_pred --CCCEEEEcccchh-------------------hhhHHH----HHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVK----IIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~----~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||++|... ..++.+ ++...++.+ ..++|. +|.+.. ...|...
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~------~~~p~~~ 154 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGF------AAQPYAA 154 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhc------CCCCCch
Confidence 5899999998532 222333 333344444 346665 443321 1123457
Q ss_pred hhHHHHHHHHHHHHH--------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKARIRRAVEA--------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~--------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|.....+.+. .++.++.+.|+.+...+....... .... ......+.+++|+|++++
T Consensus 155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~~~~------~~~~~~~~~pe~vA~~il 223 (330)
T PRK06139 155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----TGRR------LTPPPPVYDPRRVAKAVV 223 (330)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----cccc------ccCCCCCCCHHHHHHHHH
Confidence 899999987665542 268888899988876643211110 0000 011124678999999999
Q ss_pred HHhcCCc
Q 021596 202 KAVDDPR 208 (310)
Q Consensus 202 ~~l~~~~ 208 (310)
.++++++
T Consensus 224 ~~~~~~~ 230 (330)
T PRK06139 224 RLADRPR 230 (330)
T ss_pred HHHhCCC
Confidence 9998764
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=121.63 Aligned_cols=199 Identities=14% Similarity=0.094 Sum_probs=125.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||.++++.|+++|++|++..|+.... ......+.+.. ..+.++.+|++|.+++.++++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEE--DAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchh--hHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999887753321 11111122222 246788999999998877665
Q ss_pred CCCEEEEcccchh--------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 QVDVVISTVGHAL--------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+++|+++... +.++..+++++... ..-.++|+ |+..... ..+....|+.
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~------~~~~~~~Y~a 201 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ------PSPHLLDYAA 201 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc------CCCCcchhHH
Confidence 5799999998521 44455666666542 10235665 5433221 1223567999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|..++.+.+. .|+++..++||.+.+.+...... ................+..++|+|.+++.++.+
T Consensus 202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~ 275 (294)
T PRK07985 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ------TQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ 275 (294)
T ss_pred HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC------CHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCh
Confidence 99998877653 48999999999987764311100 000000001111112467789999999999865
Q ss_pred Cc--cCCceEEEc
Q 021596 207 PR--TLNKNLYIQ 217 (310)
Q Consensus 207 ~~--~~~~~~~~~ 217 (310)
.. ..|..+.+.
T Consensus 276 ~~~~itG~~i~vd 288 (294)
T PRK07985 276 ESSYVTAEVHGVC 288 (294)
T ss_pred hcCCccccEEeeC
Confidence 32 235555554
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=119.51 Aligned_cols=194 Identities=16% Similarity=0.144 Sum_probs=125.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|++++|+.. + ......++++.+|+.|.+++.++++ +
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~-----~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP-----E-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh-----h-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 378999999999999999999999999999999832 1 1123467889999999999888775 4
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||++|... ..++..+++++.. .+...++|+ |+..... ..+....|+
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------~~~~~~~Y~ 149 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------PSPGTAAYG 149 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------CCCCCchhH
Confidence 699999998532 3344555555543 211346666 5443221 123357899
Q ss_pred HHHHHHHHHHHHc------CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 133 DVKARIRRAVEAE------GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 133 ~~K~~~e~~l~~~------~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
.+|...+.+.+.. .+.+..++||.+........... . . .............+..++|+|++++.++..
T Consensus 150 ~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~----~-~-~~~~~~~~~~~~~~~~p~~va~~~~~L~~~ 223 (252)
T PRK07856 150 AAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD----A-E-GIAAVAATVPLGRLATPADIAWACLFLASD 223 (252)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC----H-H-HHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999888641 26677788888765532211000 0 0 000000001112356789999999998865
Q ss_pred Cc--cCCceEEEcCC
Q 021596 207 PR--TLNKNLYIQPP 219 (310)
Q Consensus 207 ~~--~~~~~~~~~~~ 219 (310)
.. ..|..+.+.+.
T Consensus 224 ~~~~i~G~~i~vdgg 238 (252)
T PRK07856 224 LASYVSGANLEVHGG 238 (252)
T ss_pred ccCCccCCEEEECCC
Confidence 32 24566666543
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.4e-14 Score=118.67 Aligned_cols=200 Identities=16% Similarity=0.184 Sum_probs=127.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|.||.+++++|+++|++|+++.|+.... ......+.. ..+.++.+|++|.+++.++++
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV----DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 36899999999999999999999999999998873211 112223322 247889999999999888875
Q ss_pred -CCCEEEEcccchh-------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... ..+.. .++..+++.+ ..++|+ |+..... ..+....
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 158 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSEL------GRETVSA 158 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccC------CCCCCcc
Confidence 4899999998743 12222 3444444444 566666 4432221 1123567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE---ecCCCceeEeeccchHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI---LGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~~ 200 (310)
|+.+|...+.+.+. .++++..++||.+............ ........ .........+..++|+|..+
T Consensus 159 Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 235 (265)
T PRK07097 159 YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQ---ADGSRHPFDQFIIAKTPAARWGDPEDLAGPA 235 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcc---ccccchhHHHHHHhcCCccCCcCHHHHHHHH
Confidence 99999998877754 4799999999998776432211100 00000000 00000112467789999999
Q ss_pred HHHhcCC--ccCCceEEEc
Q 021596 201 IKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~--~~~~~~~~~~ 217 (310)
..++.+. ...+..+++.
T Consensus 236 ~~l~~~~~~~~~g~~~~~~ 254 (265)
T PRK07097 236 VFLASDASNFVNGHILYVD 254 (265)
T ss_pred HHHhCcccCCCCCCEEEEC
Confidence 9999763 2245555554
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=118.49 Aligned_cols=196 Identities=14% Similarity=0.167 Sum_probs=120.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||.++++.|+++|++|+++.|+.. +.+.. ....+..++++|+.|.+++.++++ +
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~-----~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPE-----AGKAA--ADEVGGLFVPTDVTDEDAVNALFDTAAETYGS 79 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHH--HHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999999732 22111 111234688999999999888876 5
Q ss_pred CCEEEEcccchh---------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 77 VDVVISTVGHAL---------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 77 ~d~Vi~~a~~~~---------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
+|+|||+++... ..+.. .++..+++.+ ..++|+ |+..... ...+....
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~-----g~~~~~~~ 153 (255)
T PRK06057 80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVM-----GSATSQIS 153 (255)
T ss_pred CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhcc-----CCCCCCcc
Confidence 799999997531 11122 2334444444 345554 4432211 11112457
Q ss_pred hHHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|+..+.+.+ ..+++++.++||.+.+............ ...+.....+ ...+..++|+++++..+
T Consensus 154 Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~a~~~~~l 228 (255)
T PRK06057 154 YTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPE-RAARRLVHVP----MGRFAEPEEIAAAVAFL 228 (255)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHH-HHHHHHhcCC----CCCCcCHHHHHHHHHHH
Confidence 9999987766554 2479999999999877643322110000 0000000011 12478899999998887
Q ss_pred hcCCc--cCCceEEEc
Q 021596 204 VDDPR--TLNKNLYIQ 217 (310)
Q Consensus 204 l~~~~--~~~~~~~~~ 217 (310)
+.+.. ..+..+.+.
T Consensus 229 ~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 229 ASDDASFITASTFLVD 244 (255)
T ss_pred hCccccCccCcEEEEC
Confidence 76532 234555553
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=119.89 Aligned_cols=196 Identities=11% Similarity=0.097 Sum_probs=117.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
|++++||||+|+||+++++.|+++|++|+++ .|+. ++. +....+.. ..+..+.+|+.|.+++.++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 75 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL-----HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ 75 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999875 4542 121 12222222 347789999999999988776
Q ss_pred ---CCCEEEEcccchh--------------------hhhHHHHHHHHHHc------CCccEEcc-CCCCCCccccCCCCC
Q 021596 76 ---QVDVVISTVGHAL--------------------LADQVKIIAAIKEA------GNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~------~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|+|||+++... ..++..+++++... ++-.+||+ |+....... +
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---~-- 150 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---P-- 150 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---C--
Confidence 4689999998642 22222333333221 11234665 554322110 1
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.....|+.+|...+.+++. .+++++++||+.++++........ ....... .........+++|+|+
T Consensus 151 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~dva~ 223 (247)
T PRK09730 151 GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEP------GRVDRVK-SNIPMQRGGQPEEVAQ 223 (247)
T ss_pred CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCH------HHHHHHH-hcCCCCCCcCHHHHHH
Confidence 1124699999998877653 479999999999987642211000 0000000 0000011237899999
Q ss_pred HHHHHhcCCc--cCCceEEE
Q 021596 199 YTIKAVDDPR--TLNKNLYI 216 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~ 216 (310)
++..++.++. ..|..+.+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~ 243 (247)
T PRK09730 224 AIVWLLSDKASYVTGSFIDL 243 (247)
T ss_pred HHHhhcChhhcCccCcEEec
Confidence 9999886542 23444444
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=119.63 Aligned_cols=197 Identities=14% Similarity=0.163 Sum_probs=118.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|++|+||||+|+||+.+++.|+++|++|.++.++.. ++. .....+. ...+.++.+|+.|.+++.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDA----AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA 77 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh
Confidence 579999999999999999999999999887665421 121 1222222 2357889999999998877664
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHHHH-cC-----CccEEcc-CCCCCCccccCCCCCC
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAIKE-AG-----NVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~-~~-----~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+++... ..+...+++++.+ .. .-.++|+ |+...... . ..
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----~-~~ 152 (248)
T PRK06947 78 FGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG----S-PN 152 (248)
T ss_pred cCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC----C-CC
Confidence 5899999998532 2223344433322 11 0124655 44222111 0 11
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++++++||.+...+....... .... .............++|+|+.
T Consensus 153 ~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~e~va~~ 225 (248)
T PRK06947 153 EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-----GRAA--RLGAQTPLGRAGEADEVAET 225 (248)
T ss_pred CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-----HHHH--HHhhcCCCCCCcCHHHHHHH
Confidence 124699999998876643 479999999999876543210000 0000 00000001124678999999
Q ss_pred HHHHhcCCc--cCCceEEE
Q 021596 200 TIKAVDDPR--TLNKNLYI 216 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~ 216 (310)
++.++.++. ..|+.+.+
T Consensus 226 ~~~l~~~~~~~~~G~~~~~ 244 (248)
T PRK06947 226 IVWLLSDAASYVTGALLDV 244 (248)
T ss_pred HHHHcCccccCcCCceEee
Confidence 999887653 24454444
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=121.55 Aligned_cols=198 Identities=16% Similarity=0.131 Sum_probs=122.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ........+. ...+.++.+|++|++++.++++
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVE---EANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3799999999999999999999999999888765321 1111122222 2357889999999998887776
Q ss_pred --CCCEEEEcccch---------h--------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCC
Q 021596 76 --QVDVVISTVGHA---------L--------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 76 --~~d~Vi~~a~~~---------~--------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
++|++||+|+.. . ...+..++..+++.+ -.++|+ |+.+.. .
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~ 157 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNL------V 157 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccc------c
Confidence 479999999642 0 111223344444444 456776 543321 1
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..|....|+.+|+..+.+.+. .|+++..+.||.+.......+... ...... .........+..++|+
T Consensus 158 ~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-----~~~~~~-~~~~~~~~r~~~p~~v 231 (260)
T PRK08416 158 YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-----EEVKAK-TEELSPLNRMGQPEDL 231 (260)
T ss_pred CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-----HHHHHH-HHhcCCCCCCCCHHHH
Confidence 122356799999999887753 478899999998866543221110 000000 0000011236789999
Q ss_pred HHHHHHHhcCC-c-cCCceEEEc
Q 021596 197 ATYTIKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~-~-~~~~~~~~~ 217 (310)
|.+++.++.+. . ..|+.+.+.
T Consensus 232 a~~~~~l~~~~~~~~~G~~i~vd 254 (260)
T PRK08416 232 AGACLFLCSEKASWLTGQTIVVD 254 (260)
T ss_pred HHHHHHHcChhhhcccCcEEEEc
Confidence 99999988653 2 235555553
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7e-14 Score=115.42 Aligned_cols=195 Identities=15% Similarity=0.185 Sum_probs=121.7
Q ss_pred CCC--CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MAS--KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~--~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|+. .++|+||||+|.||+++++.|+++|++|+++.|+.. ++. +.+ ...+++.+.+|+.|.+++.++++
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~----~~~---~~l~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK----DAA---ERLAQETGATAVQTDSADRDAVIDVVRKS 73 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCH----HHH---HHHHHHhCCeEEecCCCCHHHHHHHHHHh
Confidence 554 378999999999999999999999999988776521 121 121 22357888999999998887776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++||+++... ..+...++.++... ....++|+ |+..... ...+....|+.
T Consensus 74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~~Y~~ 148 (237)
T PRK12742 74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----MPVAGMAAYAA 148 (237)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----CCCCCCcchHH
Confidence 4899999998642 22233343333332 11245655 4432211 11234578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|+..+.+.+. .+++++.++||.+...+.+.... . ... .........+..++|+++++..++.+
T Consensus 149 sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----~-~~~---~~~~~~~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 149 SKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-----M-KDM---MHSFMAIKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred hHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-----H-HHH---HHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 99999887753 47899999999887654221100 0 000 00000112357889999999988865
Q ss_pred Cc--cCCceEEE
Q 021596 207 PR--TLNKNLYI 216 (310)
Q Consensus 207 ~~--~~~~~~~~ 216 (310)
.. ..|..+.+
T Consensus 220 ~~~~~~G~~~~~ 231 (237)
T PRK12742 220 EASFVTGAMHTI 231 (237)
T ss_pred ccCcccCCEEEe
Confidence 32 23444444
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-14 Score=117.65 Aligned_cols=195 Identities=17% Similarity=0.183 Sum_probs=124.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|.||.++++.|+++|++|+++.|+.. +. ...+.+.. ..+..+.+|+.|.+++.++++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLD-----ALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHH-----HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999732 22 12222322 346788999999999888765
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCC-CCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEF-GNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~-~~~~~~~~~~~~~~~ 128 (310)
++|++||+++... ..+...+++++. +.++-.++++ |+. +... ...+..
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~ 158 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII-----NVPQQV 158 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC-----CCCCCc
Confidence 6899999998642 233344444443 3321134555 332 2211 011123
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .|+++..++||.+...+....... ... +........+..++|+|+++.
T Consensus 159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~------~~~---~~~~~~~~r~~~p~~va~~~~ 229 (253)
T PRK05867 159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY------QPL---WEPKIPLGRLGRPEELAGLYL 229 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH------HHH---HHhcCCCCCCcCHHHHHHHHH
Confidence 5799999999887764 478999999999876543221110 000 000001124678999999999
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.+.. ..|+.+.+.
T Consensus 230 ~L~s~~~~~~tG~~i~vd 247 (253)
T PRK05867 230 YLASEASSYMTGSDIVID 247 (253)
T ss_pred HHcCcccCCcCCCeEEEC
Confidence 9986532 235555554
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=7e-14 Score=116.76 Aligned_cols=197 Identities=14% Similarity=0.134 Sum_probs=126.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|.++|++|++++|+.... ......+.. ..+.++.+|+.|.+++.++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~----~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA----NHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999873211 112222322 346788999999999887655
Q ss_pred -CCCEEEEcccchh------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+++... ..++.++++++. +.+ ..++|+ |+..... ..+....|
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~~Y 159 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN------KNINMTSY 159 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccC------CCCCcchh
Confidence 5799999998532 334555666664 333 346665 4433211 12235679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .++++..+.||.+............ .... . ........+..++|++.++..++
T Consensus 160 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~---~-~~~~~~~~~~~~~d~a~~~~~l~ 232 (255)
T PRK06113 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---IEQK---M-LQHTPIRRLGQPQDIANAALFLC 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHH---HHHH---H-HhcCCCCCCcCHHHHHHHHHHHc
Confidence 9999999888754 4678888889988764332111000 0000 0 00011123568899999999998
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.... ..|+.+++.+
T Consensus 233 ~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 233 SPAASWVSGQILTVSG 248 (255)
T ss_pred CccccCccCCEEEECC
Confidence 6532 2466666654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3e-14 Score=120.10 Aligned_cols=191 Identities=16% Similarity=0.160 Sum_probs=118.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC---CcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL---GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~---~~~~v~~D~~d~~~~~~~~~------ 75 (310)
|+++||||+|+||.++++.|+++|++|+++.|+.+. .....+.+... .+.++.+|+.|++++.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG----LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 579999999999999999999999999999987321 11122233221 24557899999988876665
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||++|... ..+..++++++. +.+...++|+ |+.... ...|....
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------~~~~~~~~ 150 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGL------VALPWHAA 150 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccccc------CCCCCCcc
Confidence 4899999998632 333445555543 3221346665 443321 11233567
Q ss_pred hHHHHHHHHHHHH-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+ ..++++++++||.+.++........... .......... .......++++|+|++++.+
T Consensus 151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~vA~~~~~~ 228 (272)
T PRK07832 151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVD-REDPRVQKWV-DRFRGHAVTPEKAAEKILAG 228 (272)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccC-cchhhHHHHH-HhcccCCCCHHHHHHHHHHH
Confidence 9999988776653 3579999999999887654332110000 0000000000 00112457899999999999
Q ss_pred hcCC
Q 021596 204 VDDP 207 (310)
Q Consensus 204 l~~~ 207 (310)
+..+
T Consensus 229 ~~~~ 232 (272)
T PRK07832 229 VEKN 232 (272)
T ss_pred HhcC
Confidence 9643
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=118.49 Aligned_cols=197 Identities=13% Similarity=0.152 Sum_probs=125.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|.||+++++.|.++|++|++++|+.+.. ......+. ...+.++.+|+.|.+++.++++
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADAL----AQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999984221 11222222 2347788999999988777665
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... +.+..++++++ ++.+ ..++|+ |+..... + .+..
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~-----~-~~~~ 157 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLT-----H-VRSG 157 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCC-----C-CCCC
Confidence 5899999998632 23344555555 3444 467766 4433221 1 1234
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+++. .++++..++||.+........... ..............-+...+|++.++.
T Consensus 158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~ 231 (257)
T PRK09242 158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD------PDYYEQVIERTPMRRVGEPEEVAAAVA 231 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC------hHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 6799999998887763 478999999998866543221110 000000000011123557899999999
Q ss_pred HHhcCCc--cCCceEEEc
Q 021596 202 KAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~ 217 (310)
.++.... ..|+.+.+.
T Consensus 232 ~l~~~~~~~~~g~~i~~~ 249 (257)
T PRK09242 232 FLCMPAASYITGQCIAVD 249 (257)
T ss_pred HHhCcccccccCCEEEEC
Confidence 9886432 235666664
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-14 Score=118.10 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=102.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------- 75 (310)
||+|+||||||+||++++++|+++|++|++++|+... . . .......+.++.+|+.|.+++.+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-----~-~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-----S-L-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-----h-h-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999999999998432 1 1 11112357889999999998887442
Q ss_pred ---CCCEEEEcccchh--------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL--------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+++... ..+ ...+++.+.+.+ ..++|+ |+.... ...+.
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~------~~~~~ 146 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAAR------NAYAG 146 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhc------CCCCC
Confidence 4789999987532 222 334444544444 567776 554322 11223
Q ss_pred chhhHHHHHHHHHHHHH------cCCCEEEEecceecccc
Q 021596 128 KSVYYDVKARIRRAVEA------EGIPYTYVESYCFDGYF 161 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~ 161 (310)
...|+.+|..++.+++. .++++..++||.+...+
T Consensus 147 ~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 186 (243)
T PRK07023 147 WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM 186 (243)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence 67899999999988863 47888889999886653
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.2e-14 Score=115.73 Aligned_cols=196 Identities=13% Similarity=0.125 Sum_probs=122.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|.||+++++.|+++|++|+++.|+.. ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA------PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH------HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999999888621 11112222 2347789999999999988875
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||++|... ..+...+.+++ .+.+.-.++|+ |+..... ..+....
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------~~~~~~~ 155 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------GGIRVPS 155 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------CCCCCcc
Confidence 5899999998642 22233344433 33321246665 4322111 1122457
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||++.......+.... ...... .. .-....+..++|+|.++..+
T Consensus 156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~---~~~~~~--~~-~~p~~~~~~peeva~~~~~L 229 (251)
T PRK12481 156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADT---ARNEAI--LE-RIPASRWGTPDDLAGPAIFL 229 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccCh---HHHHHH--Hh-cCCCCCCcCHHHHHHHHHHH
Confidence 99999999877753 5899999999988765432211000 000000 00 00012467899999999998
Q ss_pred hcCC--ccCCceEEEc
Q 021596 204 VDDP--RTLNKNLYIQ 217 (310)
Q Consensus 204 l~~~--~~~~~~~~~~ 217 (310)
+.+. ...|..+.+.
T Consensus 230 ~s~~~~~~~G~~i~vd 245 (251)
T PRK12481 230 SSSASDYVTGYTLAVD 245 (251)
T ss_pred hCccccCcCCceEEEC
Confidence 8643 2235555553
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-13 Score=115.04 Aligned_cols=178 Identities=19% Similarity=0.281 Sum_probs=118.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh-cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~-~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|++|..+++.|+++|++|++++|+.. +.. ....+. ...+.++.+|+.|.+++.++++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAE-----KLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999832 221 112221 2357889999999998887765
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CC-CCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SE-FGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+++... ..++.++++++. +.+ ..+++. |+ .+.. ..+....
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-------~~~~~~~ 151 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSI-------GYPGYAS 151 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCc-------CCCCccH
Confidence 5799999998632 333445555554 333 345554 33 3321 1223567
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+++. .+++++.+.||.+........... . .. .....+.+++|+|+.+..+
T Consensus 152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~-~~--------~~~~~~~~~~~va~~i~~~ 218 (263)
T PRK09072 152 YCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA----L-NR--------ALGNAMDDPEDVAAAVLQA 218 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc----c-cc--------cccCCCCCHHHHHHHHHHH
Confidence 99999998776643 467888888987755432111000 0 00 0011356789999999999
Q ss_pred hcCC
Q 021596 204 VDDP 207 (310)
Q Consensus 204 l~~~ 207 (310)
++..
T Consensus 219 ~~~~ 222 (263)
T PRK09072 219 IEKE 222 (263)
T ss_pred HhCC
Confidence 9865
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=113.87 Aligned_cols=190 Identities=13% Similarity=0.140 Sum_probs=119.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|.||+++++.|+++|++|+++.|+... ..+.+...+++++.+|+.|.+++.++++ ++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP-------AIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence 799999999999999999999999999999998431 1133334568899999999998877665 48
Q ss_pred CEEEEcccchh-------------------hhhHH----HHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 78 DVVISTVGHAL-------------------LADQV----KIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
|++||+++... ..+.. .++...++.+ ...++|+ |+.... ...+....|+
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~------~~~~~~~~Y~ 149 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE------KGSDKHIAYA 149 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc------cCCCCCccHH
Confidence 99999998632 11222 2333333322 0235665 443321 1122356899
Q ss_pred HHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 133 DVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 133 ~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
.+|...+.+.+. .++++..++||.+...... ... .. .. .... ....-+..++|+|.++..++..
T Consensus 150 asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~---~~-~~--~~~~-~~~~~~~~~~~va~~~~~l~~~ 219 (236)
T PRK06483 150 ASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAA---YR-QK--ALAK-SLLKIEPGEEEIIDLVDYLLTS 219 (236)
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHH---HH-HH--Hhcc-CccccCCCHHHHHHHHHHHhcC
Confidence 999999988764 2477888889877432110 000 00 00 0000 0011245689999999999875
Q ss_pred CccCCceEEEc
Q 021596 207 PRTLNKNLYIQ 217 (310)
Q Consensus 207 ~~~~~~~~~~~ 217 (310)
....|..+.+.
T Consensus 220 ~~~~G~~i~vd 230 (236)
T PRK06483 220 CYVTGRSLPVD 230 (236)
T ss_pred CCcCCcEEEeC
Confidence 44456666664
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6e-14 Score=116.18 Aligned_cols=195 Identities=18% Similarity=0.218 Sum_probs=122.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|++|+++++.|+++|++|+++.|... +........+. ...+.++.+|+.|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE---ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999999999999988321 11111112222 2357889999999998877665
Q ss_pred CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..+ ...++..+++.+ ..++++ |+...... .+....|
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~------~~~~~~y 150 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKG------QFGQTNY 150 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCC------CCCcchh
Confidence 4899999998532 122 233555556666 677776 54322211 1234679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+++. .+++++.++|+.+.+.......... . .. +........+..++|+++++..++
T Consensus 151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~-~~----~~~~~~~~~~~~~~~~a~~~~~l~ 222 (242)
T TIGR01829 151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV---L-NS----IVAQIPVGRLGRPEEIAAAVAFLA 222 (242)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH---H-HH----HHhcCCCCCCcCHHHHHHHHHHHc
Confidence 9999977766543 4788999999988765432211100 0 00 000011123456789999988877
Q ss_pred cCC--ccCCceEEEc
Q 021596 205 DDP--RTLNKNLYIQ 217 (310)
Q Consensus 205 ~~~--~~~~~~~~~~ 217 (310)
.++ ...|+.+.+.
T Consensus 223 ~~~~~~~~G~~~~~~ 237 (242)
T TIGR01829 223 SEEAGYITGATLSIN 237 (242)
T ss_pred CchhcCccCCEEEec
Confidence 653 2346666664
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=115.75 Aligned_cols=195 Identities=14% Similarity=0.162 Sum_probs=122.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+. ++.+.+ ..+. ...+.++.+|+.+.+++.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV-----ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE 83 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999983 332221 2222 2357889999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCC-------ccEEcc-CCCCCCccccCC
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGN-------VTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~-------v~~~v~-s~~~~~~~~~~~ 122 (310)
++|++||+++... ..+..++++++. +... ..++|+ |+.....
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----- 158 (258)
T PRK06949 84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR----- 158 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-----
Confidence 5899999998532 223344444443 2210 135555 4332211
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccch
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 195 (310)
..+....|+.+|...+.+.+. .++++.+++||++.+........ ......+... -....+..++|
T Consensus 159 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~-~~~~~~~~p~~ 230 (258)
T PRK06949 159 -VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE------TEQGQKLVSM-LPRKRVGKPED 230 (258)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC------hHHHHHHHhc-CCCCCCcCHHH
Confidence 122356899999988877653 47899999999987654321110 0000000000 01124666899
Q ss_pred HHHHHHHHhcCCc--cCCceEEE
Q 021596 196 IATYTIKAVDDPR--TLNKNLYI 216 (310)
Q Consensus 196 ~a~~~~~~l~~~~--~~~~~~~~ 216 (310)
++.++..++.++. ..|..+.+
T Consensus 231 ~~~~~~~l~~~~~~~~~G~~i~~ 253 (258)
T PRK06949 231 LDGLLLLLAADESQFINGAIISA 253 (258)
T ss_pred HHHHHHHHhChhhcCCCCcEEEe
Confidence 9999999886432 23444444
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-14 Score=116.70 Aligned_cols=200 Identities=15% Similarity=0.142 Sum_probs=125.4
Q ss_pred CCC---CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MAS---KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~---~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
||. .++++||||+ +.||..+++.|+++|++|++..|+. ...+.++++....+.++++|++|+++++++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-----RMKKSLQKLVDEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-----HHHHHHHhhccCceeEEeCCCCCHHHHHHHHH
Confidence 554 3689999999 7999999999999999999999872 12223344434467889999999998887664
Q ss_pred -------CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCC
Q 021596 76 -------QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~ 123 (310)
.+|++||++|... ..+...+.+++...- +-.++|. |+.+...
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------ 149 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER------ 149 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc------
Confidence 4899999998531 222333444443320 0134554 4433221
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..|....|+.+|...+.+.+. .|+++..+.||.+...+....... ...............+..++|+
T Consensus 150 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedv 223 (252)
T PRK06079 150 AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH------KDLLKESDSRTVDGVGVTIEEV 223 (252)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh------HHHHHHHHhcCcccCCCCHHHH
Confidence 123456899999999887753 478899999998876543221100 0000000000011246788999
Q ss_pred HHHHHHHhcCC-c-cCCceEEEc
Q 021596 197 ATYTIKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~-~-~~~~~~~~~ 217 (310)
|.++..++.+. . ..|+++.+.
T Consensus 224 a~~~~~l~s~~~~~itG~~i~vd 246 (252)
T PRK06079 224 GNTAAFLLSDLSTGVTGDIIYVD 246 (252)
T ss_pred HHHHHHHhCcccccccccEEEeC
Confidence 99999998653 2 235555553
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-13 Score=113.62 Aligned_cols=178 Identities=13% Similarity=0.100 Sum_probs=114.3
Q ss_pred CCCC--ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCC--HHHHHH
Q 021596 1 MASK--SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLN--HESLVN 72 (310)
Q Consensus 1 M~~~--~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d--~~~~~~ 72 (310)
|..| ++|+||||+|++|+++++.|+++|++|++++|+.. +.+ ....+. ...+.++.+|+.| .+++.+
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK-----KLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQ 75 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH-----HHHHHHHHHHHcCCCCcceEEeeecccchHHHHH
Confidence 5553 78999999999999999999999999999999843 221 112221 2246678899875 334444
Q ss_pred Hh--------cCCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccc
Q 021596 73 AI--------KQVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDR 119 (310)
Q Consensus 73 ~~--------~~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~ 119 (310)
++ ..+|+|||+++... ..+..++++++ .+.+ ..++++ ++....
T Consensus 76 ~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~--- 151 (239)
T PRK08703 76 FAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGE--- 151 (239)
T ss_pred HHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccc---
Confidence 33 35799999998531 23333444444 3334 346655 432211
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHH-------c-CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEee
Q 021596 120 AHGAVEPAKSVYYDVKARIRRAVEA-------E-GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYN 191 (310)
Q Consensus 120 ~~~~~~~~~~~y~~~K~~~e~~l~~-------~-~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 191 (310)
...+....|+.+|+..+.+.+. . ++++..++||.+.+........ +.....+.
T Consensus 152 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~----------------~~~~~~~~ 212 (239)
T PRK08703 152 ---TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP----------------GEAKSERK 212 (239)
T ss_pred ---cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC----------------CCCccccC
Confidence 1122346799999999888753 1 5788899999887753221110 01112356
Q ss_pred ccchHHHHHHHHhcC
Q 021596 192 KEDDIATYTIKAVDD 206 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~ 206 (310)
..+|++..+..++..
T Consensus 213 ~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 213 SYGDVLPAFVWWASA 227 (239)
T ss_pred CHHHHHHHHHHHhCc
Confidence 889999999998864
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-14 Score=116.91 Aligned_cols=190 Identities=16% Similarity=0.119 Sum_probs=119.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||.++++.|+++|++|+++.|+.+. .......+.. ..+.++.+|+.|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET----AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 479999999999999999999999999999987321 1122233333 347788999999999887764
Q ss_pred CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||+++... ..++..+ +..+++.+.-.++|+ |+..... ..+....|
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~~~~~~Y 150 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE------GNPILSAY 150 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC------CCCCCcch
Confidence 4799999998632 2222233 333344331246665 4432221 11235789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe------cCCCceeEeeccchHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL------GDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~ 198 (310)
+.+|...+.+.+. .++.+..++||.+............ ......... ........+.+++|+++
T Consensus 151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 227 (254)
T TIGR02415 151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET---SEIAGKPIGEGFEEFSSEIALGRPSEPEDVAG 227 (254)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh---hhcccCchHHHHHHHHhhCCCCCCCCHHHHHH
Confidence 9999999887753 3688899999988655422211100 000000000 00001123778899999
Q ss_pred HHHHHhcCC
Q 021596 199 YTIKAVDDP 207 (310)
Q Consensus 199 ~~~~~l~~~ 207 (310)
++..++..+
T Consensus 228 ~~~~l~~~~ 236 (254)
T TIGR02415 228 LVSFLASED 236 (254)
T ss_pred HHHhhcccc
Confidence 999999765
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-13 Score=113.46 Aligned_cols=196 Identities=13% Similarity=0.088 Sum_probs=123.8
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCC-------CCchhhHhHhhhc--CCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLS-------APSKSQLLDHFKN--LGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~ 72 (310)
+++|+||||+| .||.++++.|+++|++|+++.|+..+. ..........+.. ..++++.+|+.|.+++..
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 36899999995 799999999999999999999873211 0111112222222 347889999999998877
Q ss_pred Hhc-------CCCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccC
Q 021596 73 AIK-------QVDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 73 ~~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~ 121 (310)
+++ ++|+|||+++... +.++..+++++... + ..++|+ |+.....
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~---- 159 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLG---- 159 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccC----
Confidence 665 4799999998642 34455566665432 2 356666 4432211
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKED 194 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 194 (310)
+ .+....|+.+|...+.+++. .+++++.++||.+...+...... ........ ...+..++
T Consensus 160 -~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~----~~~~~~~~ 226 (256)
T PRK12748 160 -P-MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------HHLVPKFP----QGRVGEPV 226 (256)
T ss_pred -C-CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------HhhhccCC----CCCCcCHH
Confidence 1 12356799999999988653 47899999999876543221000 00000000 11245678
Q ss_pred hHHHHHHHHhcCCc--cCCceEEEc
Q 021596 195 DIATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 195 D~a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
|+|+.+..++.... ..+..+++.
T Consensus 227 ~~a~~~~~l~~~~~~~~~g~~~~~d 251 (256)
T PRK12748 227 DAARLIAFLVSEEAKWITGQVIHSE 251 (256)
T ss_pred HHHHHHHHHhCcccccccCCEEEec
Confidence 99999988886532 235666663
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-13 Score=113.28 Aligned_cols=183 Identities=13% Similarity=0.108 Sum_probs=119.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCc---hhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS---KSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
+++++||||+|+||+++++.|+++|++|+++.|+.+..... ..+..+.+.. ..+.++.+|++|.+++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 85 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV 85 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 37899999999999999999999999999999985432010 1111122222 347788999999999888776
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCC-CC
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAV-EP 126 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~-~~ 126 (310)
++|+|||+++... ..++.++++++.. .+ -.+++. |+..... +. .+
T Consensus 86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~ 159 (273)
T PRK08278 86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLD-----PKWFA 159 (273)
T ss_pred HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcc-----ccccC
Confidence 6899999998632 3345566666643 22 235554 4322110 11 13
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecce-eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYC-FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
....|+.+|..++.+.+. .++++..+.|+. +.......... . ......+..++|+|+
T Consensus 160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-------~--------~~~~~~~~~p~~va~ 224 (273)
T PRK08278 160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-------G--------DEAMRRSRTPEIMAD 224 (273)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc-------c--------cccccccCCHHHHHH
Confidence 457899999999988764 478888888873 33322111100 0 011124678899999
Q ss_pred HHHHHhcCC
Q 021596 199 YTIKAVDDP 207 (310)
Q Consensus 199 ~~~~~l~~~ 207 (310)
.++.++..+
T Consensus 225 ~~~~l~~~~ 233 (273)
T PRK08278 225 AAYEILSRP 233 (273)
T ss_pred HHHHHhcCc
Confidence 999998754
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1e-13 Score=130.16 Aligned_cols=204 Identities=15% Similarity=0.083 Sum_probs=125.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.. +... ...+. ...+..+.+|++|.+++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~-----~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLE-----AAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHH-----HHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 378999999999999999999999999999999832 2211 12221 1246788999999999988876
Q ss_pred ----CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||++|... ..+ ...++..+++.+.-.++|+ ||..... ..+.
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~------~~~~ 562 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY------AGKN 562 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC------CCCC
Confidence 6899999998643 111 2233444444431235666 4432211 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceecc-c-cccc-cCCCCC--CCCCCCe-EEEecCCCceeEeeccc
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDG-Y-FLPN-LLQPGA--AAPPRDK-VVILGDGNPKAVYNKED 194 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~-~-~~~~-~~~~~~--~~~~~~~-~~~~~~~~~~~~~i~~~ 194 (310)
...|+.+|...+.+.+. .|+++..++|+.+.. . .... +..... ....... ...+........+++++
T Consensus 563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe 642 (676)
T TIGR02632 563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA 642 (676)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence 57899999999888764 478889999987752 1 1111 000000 0000000 00011112223568899
Q ss_pred hHHHHHHHHhcCC--ccCCceEEEcC
Q 021596 195 DIATYTIKAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 195 D~a~~~~~~l~~~--~~~~~~~~~~~ 218 (310)
|+|+++..++.+. ...|..+++.|
T Consensus 643 DVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 643 DIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred HHHHHHHHHhCCcccCCcCcEEEECC
Confidence 9999999988643 22356666643
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=111.82 Aligned_cols=145 Identities=16% Similarity=0.146 Sum_probs=101.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-----QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-----~~d 78 (310)
|++++||||+|++|+++++.|+++|++|++++|+... .+.+.. ..++.++.+|+.|.+++.++++ ++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-----DTALQA--LPGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc-----hHHHHh--ccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 5689999999999999999999999999999998432 222222 2367888999999998887776 589
Q ss_pred EEEEcccchh---------------------hhhHHHHHHHHHHc---CCccEEcc--CCCCCCccccCCCCCCcchhhH
Q 021596 79 VVISTVGHAL---------------------LADQVKIIAAIKEA---GNVTRFFP--SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 79 ~Vi~~a~~~~---------------------~~~~~~~~~aa~~~---~~v~~~v~--s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|||+++... ..+...+++++... + ..++++ |.++.... +.......|+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~----~~~~~~~~Y~ 148 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVEL----PDGGEMPLYK 148 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCcccccc----CCCCCccchH
Confidence 9999997641 22344555555432 2 234444 44443321 1112345799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGY 160 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~ 160 (310)
.+|...+.+++. .++.+..++||++...
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 999999988864 3577888889887654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-13 Score=111.43 Aligned_cols=190 Identities=21% Similarity=0.224 Sum_probs=121.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhhc-CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKN-LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+.+ ..+.. .+++++.+|+.|.+++.++++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE-----NKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 36999999999999999999999999999999983 333222 22222 357889999999998887665
Q ss_pred -CCCEEEEcccchh-----------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 -QVDVVISTVGHAL-----------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
++|.++|+++... ......+++++... . -.++|. |+.+... ...+....|+.+
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~-----~~~~~~~~Y~~s 153 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIVLVSSMSGIY-----KASPDQLSYAVA 153 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEEEEecchhcc-----cCCCCchHHHHH
Confidence 4699999997532 12222333333321 1 134554 5433211 112235679999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|...+.+++. .+++++++||+++.+...+... .. .. . .....+++.+|+++++..++.++
T Consensus 154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~------~~--~~--~---~~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN------WK--KL--R---KLGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh------hh--hh--c---cccCCCCCHHHHHHHHHHHhccc
Confidence 9988765532 4899999999998875322100 00 00 0 11123678899999999999654
Q ss_pred c--cCCceEEEc
Q 021596 208 R--TLNKNLYIQ 217 (310)
Q Consensus 208 ~--~~~~~~~~~ 217 (310)
. ..|..+.+.
T Consensus 221 ~~~~~g~~~~~~ 232 (238)
T PRK05786 221 ADWVDGVVIPVD 232 (238)
T ss_pred ccCccCCEEEEC
Confidence 2 245555553
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-13 Score=114.75 Aligned_cols=189 Identities=16% Similarity=0.171 Sum_probs=118.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|.||.++++.|+++|++|+++.|+... ........+.. ..+.++.+|+.|.+++.++++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE---EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999888886321 11112233322 346788999999998887765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... +.....+++.+.+.+.-.++|+ |+.... ...|....
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------~~~~~~~~ 157 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------IPWPLFVH 157 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------CCCCCCcc
Confidence 5899999998642 1112334555555441245665 443221 12234568
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+........... . ... ...........+..++|+++.+..+
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~-~~~-~~~~~~~~~~~~~~~~~va~~~~~l 231 (261)
T PRK08936 158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD----P-KQR-ADVESMIPMGYIGKPEEIAAVAAWL 231 (261)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC----H-HHH-HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999887766543 478999999998866532211000 0 000 0000001112467789999999998
Q ss_pred hcCC
Q 021596 204 VDDP 207 (310)
Q Consensus 204 l~~~ 207 (310)
+.++
T Consensus 232 ~s~~ 235 (261)
T PRK08936 232 ASSE 235 (261)
T ss_pred cCcc
Confidence 8653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.3e-13 Score=112.16 Aligned_cols=189 Identities=14% Similarity=0.149 Sum_probs=120.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH-HHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH-ESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~~~~~~~~~d~Vi~~ 83 (310)
++++||||+|+||+++++.|+++|++|+++.|+.... ....+.++.+|+.+. +.+.+.+.++|+|||+
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 7899999999999999999999999999999974321 123578899999887 4444455579999999
Q ss_pred ccchh--------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHH
Q 021596 84 VGHAL--------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 84 a~~~~--------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
++... ..++.++++++. +.+ -.++|+ |+..... ..+....|+.+|...
T Consensus 75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~~Y~~sK~a~ 147 (235)
T PRK06550 75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFV------AGGGGAAYTASKHAL 147 (235)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc------CCCCCcccHHHHHHH
Confidence 98421 333445555554 333 346666 4432211 112346799999998
Q ss_pred HHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC--cc
Q 021596 139 RRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP--RT 209 (310)
Q Consensus 139 e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~ 209 (310)
+.+.+. .+++++.++|+.+.......... ................+..++|+|+++..++.+. ..
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~ 221 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE------PGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYM 221 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC------chHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccC
Confidence 776653 47899999999886643211000 0000000000111234678899999999998653 22
Q ss_pred CCceEEEc
Q 021596 210 LNKNLYIQ 217 (310)
Q Consensus 210 ~~~~~~~~ 217 (310)
.+..+.+.
T Consensus 222 ~g~~~~~~ 229 (235)
T PRK06550 222 QGTIVPID 229 (235)
T ss_pred CCcEEEEC
Confidence 34555543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-13 Score=113.31 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=113.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh---cCCcEEEEccCC--CHHHHHHHh---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK---NLGVNFVVGDVL--NHESLVNAI--- 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~---~~~~~~v~~D~~--d~~~~~~~~--- 74 (310)
.++|+||||+|+||.++++.|++.|++|++++|+.. +. .....+. ...+.++.+|++ +.+++.+++
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEE-----KLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHH-----HHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 479999999999999999999999999999999832 22 1222232 234677888885 555554443
Q ss_pred ----cCCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 75 ----KQVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 75 ----~~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
.++|+|||+++... +.++.++++++ ++.+ ..++|+ |+..... ..
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~------~~ 159 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQ------GR 159 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcC------CC
Confidence 36899999997531 33344445544 4555 677776 5433221 11
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+....|+.+|...+.+++. .++++..++|+.+.......... . .....+..++|++.
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-------~---------~~~~~~~~~~~~~~ 223 (247)
T PRK08945 160 ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP-------G---------EDPQKLKTPEDIMP 223 (247)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC-------c---------ccccCCCCHHHHHH
Confidence 2356799999998887754 35777788888765432111100 0 00123678899999
Q ss_pred HHHHHhcCC
Q 021596 199 YTIKAVDDP 207 (310)
Q Consensus 199 ~~~~~l~~~ 207 (310)
.+..++.++
T Consensus 224 ~~~~~~~~~ 232 (247)
T PRK08945 224 LYLYLMGDD 232 (247)
T ss_pred HHHHHhCcc
Confidence 999988644
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=113.87 Aligned_cols=200 Identities=12% Similarity=0.088 Sum_probs=124.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+.+++.|+++|++ |+++.|+..+. ......+.. ..+.++.+|+.|++++.++++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG----EAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH----HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999998 99999973211 111122322 246678999999998888765
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... ..+..++++++.+ .+...++|+ |+..... ..+...
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~------~~~~~~ 155 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG------GQPFLA 155 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc------CCCCcc
Confidence 5899999998532 2334455555533 221235665 4433221 112356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe---cCCCceeEeeccchHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL---GDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a~~ 199 (310)
.|+.+|...+.+.+. .+++++.++|+.+........... ..+...... ........+++++|++++
T Consensus 156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 231 (260)
T PRK06198 156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQRE----FHGAPDDWLEKAAATQPFGRLLDPDEVARA 231 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhh----ccCCChHHHHHHhccCCccCCcCHHHHHHH
Confidence 899999999888763 367888899988866532111000 000000000 001112356889999999
Q ss_pred HHHHhcCCc--cCCceEEEc
Q 021596 200 TIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~ 217 (310)
+..++.++. ..|+.+.+.
T Consensus 232 ~~~l~~~~~~~~~G~~~~~~ 251 (260)
T PRK06198 232 VAFLLSDESGLMTGSVIDFD 251 (260)
T ss_pred HHHHcChhhCCccCceEeEC
Confidence 999886542 245655553
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-13 Score=112.93 Aligned_cols=201 Identities=17% Similarity=0.163 Sum_probs=125.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+++++.|+++|++|+++.|+... .....+.+.. ..+.++++|+.|.+++.++++
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK----AEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999998321 1122233322 246788999999998887765
Q ss_pred CCCEEEEcccchh----------------------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCC
Q 021596 76 QVDVVISTVGHAL----------------------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGND 116 (310)
Q Consensus 76 ~~d~Vi~~a~~~~----------------------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~ 116 (310)
++|++||+++... +.. .+.+++.+++.+ ..++|+ |+....
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~ 165 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAF 165 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc
Confidence 6899999998421 111 123445555554 456666 443322
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeE
Q 021596 117 VDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAV 189 (310)
Q Consensus 117 ~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
. + .+....|+.+|+..+.+.+. .++++..++||.+.......+...... .................
T Consensus 166 ~-----~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~p~~r 238 (278)
T PRK08277 166 T-----P-LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG-SLTERANKILAHTPMGR 238 (278)
T ss_pred C-----C-CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc-cchhHHHHHhccCCccC
Confidence 1 1 22356799999999887764 378899999999876643221110000 00000000000011224
Q ss_pred eeccchHHHHHHHHhcC-C-c-cCCceEEEc
Q 021596 190 YNKEDDIATYTIKAVDD-P-R-TLNKNLYIQ 217 (310)
Q Consensus 190 ~i~~~D~a~~~~~~l~~-~-~-~~~~~~~~~ 217 (310)
+..++|+|++++.++.. . . ..|..+.+.
T Consensus 239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vd 269 (278)
T PRK08277 239 FGKPEELLGTLLWLADEKASSFVTGVVLPVD 269 (278)
T ss_pred CCCHHHHHHHHHHHcCccccCCcCCCEEEEC
Confidence 67889999999998875 2 2 235556664
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-13 Score=113.72 Aligned_cols=197 Identities=18% Similarity=0.155 Sum_probs=123.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|+||+++++.|+++|++|+++.|+.+ +. .....+.. ..+.++.+|++|.+++.++++
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQE-----KVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 68999999999999999999999999999999832 22 11122222 346788999999998888765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+++... ..++.++++++... .+-.+++. |+..... ..+....|+
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~------~~~~~~~Y~ 158 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV------PMPMQAHVC 158 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc------CCCCccHHH
Confidence 4799999997421 34445666665432 10135655 4432211 123356899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceecc-ccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDG-YFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|...+.+.+. .+++++.++|+.+.+ ......... ...............+..++|+|++++.++
T Consensus 159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 232 (264)
T PRK07576 159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS------PELQAAVAQSVPLKRNGTKQDIANAALFLA 232 (264)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999888764 467888999987753 211111100 000000000011224677899999999999
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
..+. ..|..+.+.+
T Consensus 233 ~~~~~~~~G~~~~~~g 248 (264)
T PRK07576 233 SDMASYITGVVLPVDG 248 (264)
T ss_pred ChhhcCccCCEEEECC
Confidence 7542 2455555643
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.9e-13 Score=110.92 Aligned_cols=202 Identities=15% Similarity=0.042 Sum_probs=122.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+.+.......+.++.+|+.|.+++.++++ .
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSA-----EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999999999999983 33322222113457889999999998887765 5
Q ss_pred CCEEEEcccchh------------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 77 VDVVISTVGHAL------------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
+|++||+++... ..+...+++++... .+-.++|+ ++..... + .+...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~-~~~~~ 154 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY-----P-GGGGP 154 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC-----C-CCCCc
Confidence 899999998531 11223344444321 00135555 4332211 1 12346
Q ss_pred hhHHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCC----CCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 130 VYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPG----AAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.|+.+|...+.+.+. .++++..+.||++...+........ ...... .............+..++|+|.+
T Consensus 155 ~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~r~~~~~eva~~ 233 (263)
T PRK06200 155 LYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPG-LADMIAAITPLQFAPQPEDHTGP 233 (263)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccc-hhHHhhcCCCCCCCCCHHHHhhh
Confidence 799999999887754 2477888889888655422110000 000000 00000000111246778999999
Q ss_pred HHHHhcCC-c--cCCceEEEc
Q 021596 200 TIKAVDDP-R--TLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~-~--~~~~~~~~~ 217 (310)
+..++.++ . ..|..+.+.
T Consensus 234 ~~fl~s~~~~~~itG~~i~vd 254 (263)
T PRK06200 234 YVLLASRRNSRALTGVVINAD 254 (263)
T ss_pred hhheecccccCcccceEEEEc
Confidence 99988644 2 245555553
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=118.17 Aligned_cols=154 Identities=14% Similarity=0.078 Sum_probs=103.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG----KAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999983321 11122222 2357889999999999887765
Q ss_pred ---CCCEEEEcccchh---------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCc------cccC-CC
Q 021596 76 ---QVDVVISTVGHAL---------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDV------DRAH-GA 123 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~------~~~~-~~ 123 (310)
++|+|||+||... ...+..+++.+++.+ ..++|+ |+.+... +... ..
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~ 170 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWER 170 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCccc
Confidence 5899999998532 122556777777765 567776 5432110 0000 01
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEE--ecceeccccc
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYV--ESYCFDGYFL 162 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~--rp~~~~~~~~ 162 (310)
..++...|+.+|...+.+.+. .++++.++ .||++..++.
T Consensus 171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 123357899999998877653 35555544 5988876543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-13 Score=126.72 Aligned_cols=148 Identities=14% Similarity=0.117 Sum_probs=104.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|.++|++|+++.|+.+ +.+ ....+.. .++.++.+|++|++++.++++
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEA-----AAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999832 221 2222322 357889999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... ..+..++.++ +++.+.-.++|+ ||..... ..+...
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------~~~~~~ 463 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA------PSRSLP 463 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc------CCCCCc
Confidence 4899999998742 2333444444 334331246666 4433221 123357
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL 162 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~ 162 (310)
.|+.+|+..+.+.+. .|++++.+.||.+...+.
T Consensus 464 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 503 (582)
T PRK05855 464 AYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIV 503 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccch
Confidence 899999998877643 589999999998876543
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.1e-13 Score=114.29 Aligned_cols=196 Identities=15% Similarity=0.132 Sum_probs=122.3
Q ss_pred CceEEEEccCc-chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTG-YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+| .||+++++.|+++|++|+++.|+.... ....+.+.. ..+.++++|+.|.+++.++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL----GETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 47899999997 699999999999999999998873221 112222221 347789999999998887775
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CC-CCCCccccCCCCCC
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SE-FGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~-~~~~~~~~~~~~~~ 126 (310)
++|++||+++... ..+...+++++. ..+.-.++|. ++ .+.. ..+
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-------~~~ 165 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-------AQH 165 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-------CCC
Confidence 5799999998532 223333344433 3221235555 33 3321 112
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++..++|+.+...+...... ...............+..++|+|++
T Consensus 166 ~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~~~~~~~r~~~p~~va~~ 238 (262)
T PRK07831 166 GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS-------AELLDELAAREAFGRAAEPWEVANV 238 (262)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC-------HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 356799999999888763 47889999999887654321100 0000000000111246678999999
Q ss_pred HHHHhcCCc--cCCceEEEc
Q 021596 200 TIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~ 217 (310)
+..++.+.. ..|+.+.+.
T Consensus 239 ~~~l~s~~~~~itG~~i~v~ 258 (262)
T PRK07831 239 IAFLASDYSSYLTGEVVSVS 258 (262)
T ss_pred HHHHcCchhcCcCCceEEeC
Confidence 999886542 235555553
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-13 Score=111.36 Aligned_cols=195 Identities=14% Similarity=0.142 Sum_probs=122.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+.+++.|+++|++|+++.|+.... ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL----EEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999999883211 11222222 2346789999999988876665
Q ss_pred CCCEEEEcccchh----------------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCC
Q 021596 76 QVDVVISTVGHAL----------------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 ~~d~Vi~~a~~~~----------------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|+|||+++... +.+.. .++..+.+...-.++++ |+.+..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~------ 155 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA------ 155 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc------
Confidence 4799999998421 11122 22233333321234555 443211
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccch
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 195 (310)
..+....|+.+|...+.+.+. .+++++.++|+.+.+......... .............+.+++|
T Consensus 156 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 226 (253)
T PRK08217 156 -GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE--------ALERLEKMIPVGRLGEPEE 226 (253)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH--------HHHHHHhcCCcCCCcCHHH
Confidence 112356899999998877643 579999999998876533211000 0000001111234678899
Q ss_pred HHHHHHHHhcCCccCCceEEEcC
Q 021596 196 IATYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~~~~~~~~~ 218 (310)
+|+++..++......|..+++.+
T Consensus 227 ~a~~~~~l~~~~~~~g~~~~~~g 249 (253)
T PRK08217 227 IAHTVRFIIENDYVTGRVLEIDG 249 (253)
T ss_pred HHHHHHHHHcCCCcCCcEEEeCC
Confidence 99999999876544667777754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.2e-13 Score=111.92 Aligned_cols=195 Identities=9% Similarity=0.077 Sum_probs=122.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|.||+++++.|+++|++|+++.|+.. .+..+.+. ...+..+++|+.|.+++.++++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP------TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch------HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 378999999999999999999999999998877522 11122222 2346788999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+++... ..+...+++++. +.+.-.++|+ |+..... ..+....
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~ 157 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ------GGIRVPS 157 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc------CCCCCcc
Confidence 5899999998642 333444444443 3221135555 4332111 1122458
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||.+.......+... .......... -....+..++|+|..+..+
T Consensus 158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-----~~~~~~~~~~-~p~~r~~~p~eva~~~~~l 231 (253)
T PRK08993 158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-----EQRSAEILDR-IPAGRWGLPSDLMGPVVFL 231 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-----hHHHHHHHhc-CCCCCCcCHHHHHHHHHHH
Confidence 99999998877753 478899999999977543221100 0000000000 0012377889999999998
Q ss_pred hcCCc--cCCceEEE
Q 021596 204 VDDPR--TLNKNLYI 216 (310)
Q Consensus 204 l~~~~--~~~~~~~~ 216 (310)
+.+.. ..|..+.+
T Consensus 232 ~s~~~~~~~G~~~~~ 246 (253)
T PRK08993 232 ASSASDYINGYTIAV 246 (253)
T ss_pred hCccccCccCcEEEE
Confidence 87542 23454444
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=115.20 Aligned_cols=186 Identities=16% Similarity=0.128 Sum_probs=119.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhc-CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKN-LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|.||..+++.|.++|++|+++.|+ +.+.+. .+.+.. ..+..+.+|++|.+++.++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLE-----EAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999998 333222 222321 234556699999998887764
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc---CCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA---GNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~---~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+|||++|... +.+..++++++... . ..++|. |+.+.. ...+....|
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y 156 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAF------AAAPGMAAY 156 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhc------CCCCCchHH
Confidence 5899999999642 33344455554321 2 246665 443322 112345789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEE-EecC-CCceeEeeccchHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV-ILGD-GNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~~~D~a~~~~~ 202 (310)
+.+|...+.+.+. .++.+..+.||++........... ..... +... ......+..++|+|+++..
T Consensus 157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~va~~i~~ 230 (296)
T PRK05872 157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD------LPAFRELRARLPWPLRRTTSVEKCAAAFVD 230 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc------chhHHHHHhhCCCcccCCCCHHHHHHHHHH
Confidence 9999999887753 578899999988866543221100 00000 0000 0011245778999999999
Q ss_pred HhcCC
Q 021596 203 AVDDP 207 (310)
Q Consensus 203 ~l~~~ 207 (310)
++...
T Consensus 231 ~~~~~ 235 (296)
T PRK05872 231 GIERR 235 (296)
T ss_pred HHhcC
Confidence 88754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-13 Score=124.42 Aligned_cols=198 Identities=15% Similarity=0.161 Sum_probs=126.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|.||.++++.|+++|++|+++.|+ +.+.+.+.......+..+.+|+.|++++.++++ .
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRD-----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 333322222123346678999999999888775 4
Q ss_pred CCEEEEcccchh--------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 77 VDVVISTVGHAL--------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 77 ~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
+|++||+||... +.++.++++++... .+-.++|+ |+..... ..+....|+.+
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~Y~as 417 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------ALPPRNAYCAS 417 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------CCCCCchhHHH
Confidence 899999998641 33444555555442 11246665 5433221 12335689999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|+..+.+.+. .|+++..+.||++........... .......+........+..++|+|++++.++.+.
T Consensus 418 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~ 492 (520)
T PRK06484 418 KAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-----GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA 492 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-----cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999877753 478999999998876543221110 0000000000001123568899999999988653
Q ss_pred c--cCCceEEEc
Q 021596 208 R--TLNKNLYIQ 217 (310)
Q Consensus 208 ~--~~~~~~~~~ 217 (310)
. ..|+.+.+.
T Consensus 493 ~~~~~G~~i~vd 504 (520)
T PRK06484 493 ASYVNGATLTVD 504 (520)
T ss_pred ccCccCcEEEEC
Confidence 2 245555554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.4e-13 Score=110.39 Aligned_cols=195 Identities=15% Similarity=0.135 Sum_probs=121.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++++||||+|.||+++++.|+++|++|+++.|+.. +.+ ....+. ...+.++.+|++|++++.++++
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKE-----KLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999832 221 112222 2457889999999998887664
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-C-CCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-S-EFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s-~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+++... ..+..++++++.+ .+.-.++++ | .++.. ..+...
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-------~~~~~~ 149 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-------AGPGVI 149 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-------CCCCCc
Confidence 5799999997421 3344556666632 221245665 3 33321 112345
Q ss_pred hhHHHHHHHHHHHHH--------cCCCEEEEecceecccc-ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 130 VYYDVKARIRRAVEA--------EGIPYTYVESYCFDGYF-LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~--------~~~~~~i~rp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.|+.+|...+.+.+. .|+++..++||.+.... ...+.. ...........-....+..++|++.++
T Consensus 150 ~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~ 223 (252)
T PRK07677 150 HSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE------SEEAAKRTIQSVPLGRLGTPEEIAGLA 223 (252)
T ss_pred chHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC------CHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence 799999998877652 37889999999886321 111100 000000000000112467889999998
Q ss_pred HHHhcCC--ccCCceEEEc
Q 021596 201 IKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~--~~~~~~~~~~ 217 (310)
..++... ...|..+.+.
T Consensus 224 ~~l~~~~~~~~~g~~~~~~ 242 (252)
T PRK07677 224 YFLLSDEAAYINGTCITMD 242 (252)
T ss_pred HHHcCccccccCCCEEEEC
Confidence 8887643 2234555554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.5e-13 Score=115.74 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=62.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
+++|+||||+|+||.++++.|+++|++|++++|+. .+.. ..+.+. ...+.++.+|+.|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNL-----KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999983 2221 222232 2357889999999999888775
Q ss_pred --CCCEEEEcccc
Q 021596 76 --QVDVVISTVGH 86 (310)
Q Consensus 76 --~~d~Vi~~a~~ 86 (310)
++|++||+||.
T Consensus 81 ~~~iD~li~nAg~ 93 (322)
T PRK07453 81 GKPLDALVCNAAV 93 (322)
T ss_pred CCCccEEEECCcc
Confidence 38999999984
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=113.61 Aligned_cols=202 Identities=12% Similarity=0.126 Sum_probs=123.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||+|+||.++++.|+++|++|++++|+..+. ....+.+.. ..+..+.+|+.|.+++.++++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERL----ASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH----HHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999984321 111222221 246788999999998877664
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||++|... ...+..++..+++.+ ..++|+ |+..... ..|...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~ 157 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQ------PEPHMV 157 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccC------CCCCch
Confidence 5799999998532 112334445555554 456666 4433221 122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCC-CCCCCCCCCeE---EEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQ-PGAAAPPRDKV---VILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|...+.+.+. .|+++..++||++.......... ........... ......-....+..++|+|.
T Consensus 158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~ 237 (265)
T PRK07062 158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAAR 237 (265)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence 798999988766642 57899999999887654321110 00000000000 00000001123667899999
Q ss_pred HHHHHhcCC--ccCCceEEEc
Q 021596 199 YTIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 199 ~~~~~l~~~--~~~~~~~~~~ 217 (310)
+++.++.+. ...|+.+.+.
T Consensus 238 ~~~~L~s~~~~~~tG~~i~vd 258 (265)
T PRK07062 238 ALFFLASPLSSYTTGSHIDVS 258 (265)
T ss_pred HHHHHhCchhcccccceEEEc
Confidence 999988642 2235555553
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.6e-12 Score=109.23 Aligned_cols=193 Identities=14% Similarity=0.123 Sum_probs=119.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||.++++.|+++|++|++..|+... ......+.+.. ..+.++.+|+.|.+++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~---~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g 88 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL---DASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG 88 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchh---HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 4799999999999999999999999999998876321 11222233332 347788999999988887765
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHc--------C-C-ccEEcc-CCCCCCccccCCCCC
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEA--------G-N-VTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--------~-~-v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||++|... +.++.++++++... + . -.++|+ |+..... ..
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~ 162 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV------GP 162 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc------CC
Confidence 5899999998642 33445566655321 0 0 125555 4332211 11
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+....|+.+|..++.+.+. .|+++..+.|+. ........... ... . . .....+..++|++.
T Consensus 163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~----~~~---~-~---~~~~~~~~pe~va~ 230 (306)
T PRK07792 163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGD----APD---V-E---AGGIDPLSPEHVVP 230 (306)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccc----cch---h-h---hhccCCCCHHHHHH
Confidence 2356799999999877643 478888888873 22211111000 000 0 0 01123457899999
Q ss_pred HHHHHhcCC--ccCCceEEEc
Q 021596 199 YTIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 199 ~~~~~l~~~--~~~~~~~~~~ 217 (310)
++..++... ...|+.+.+.
T Consensus 231 ~v~~L~s~~~~~~tG~~~~v~ 251 (306)
T PRK07792 231 LVQFLASPAAAEVNGQVFIVY 251 (306)
T ss_pred HHHHHcCccccCCCCCEEEEc
Confidence 998888643 2245555554
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=9e-13 Score=110.31 Aligned_cols=202 Identities=14% Similarity=0.113 Sum_probs=124.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHHHHHHHhc---C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHESLVNAIK---Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~~~~~~~---~ 76 (310)
.++++||||+|.+|.++++.|+++|++|++++|+. .+.. ..+.+. ...+.++.+|++|.+++.++++ +
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA-----DALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 47999999999999999999999999999999983 2222 222232 2347889999999999988776 5
Q ss_pred CCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+++... +.+. ..++..+++.+ -.++|+ |+..... + .+....|+
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~-----~-~~~~~~y~ 154 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN-----P-DADYICGS 154 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC-----C-CCCchHhH
Confidence 899999998632 2222 33344444443 345665 4332211 1 22345688
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCC-CCCCCC-eEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGA-AAPPRD-KVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|...+.+.+. .++++..+.||.+............. ...... .............+..++|+|++++.+
T Consensus 155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 234 (259)
T PRK06125 155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFL 234 (259)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHH
Confidence 899998877754 47889999999887653221111000 000000 000000000112367889999999998
Q ss_pred hcCC--ccCCceEEEc
Q 021596 204 VDDP--RTLNKNLYIQ 217 (310)
Q Consensus 204 l~~~--~~~~~~~~~~ 217 (310)
+.+. ...|..+.+.
T Consensus 235 ~~~~~~~~~G~~i~vd 250 (259)
T PRK06125 235 ASPRSGYTSGTVVTVD 250 (259)
T ss_pred cCchhccccCceEEec
Confidence 8643 2235555554
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=107.77 Aligned_cols=152 Identities=20% Similarity=0.216 Sum_probs=106.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC-cEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~~~~~~~------- 75 (310)
.+.|+|||||+.||.+++..|.++|.+++.+.|..... ....+.++.+.... +.++++|++|.+++.++++
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl-~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRL-ERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhH-HHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999988888884332 11102222222334 8999999999999997763
Q ss_pred CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc--CCCCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP--SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~--s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+.+|+||... +..++.++..+++.+ -.|+|. |.-|.. ..|..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~-------~~P~~~~ 162 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM-------PLPFRSI 162 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc-------CCCcccc
Confidence 7999999999765 334555666666665 456655 444442 2333458
Q ss_pred hHHHHHHHHHHHHHc-------CCCEE-EEecceeccccccc
Q 021596 131 YYDVKARIRRAVEAE-------GIPYT-YVESYCFDGYFLPN 164 (310)
Q Consensus 131 y~~~K~~~e~~l~~~-------~~~~~-i~rp~~~~~~~~~~ 164 (310)
|..||++.+.+.+.. +..+. .+.||++...+...
T Consensus 163 Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~ 204 (282)
T KOG1205|consen 163 YSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK 204 (282)
T ss_pred cchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch
Confidence 999999999887542 22222 47799888776543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=106.99 Aligned_cols=168 Identities=13% Similarity=0.108 Sum_probs=113.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-----QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-----~~d 78 (310)
|++++||||+|+||+++++.|+++|++|+++.|+. ++. +.+...+++++.+|+.|.+++.++++ ++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~-----~~~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDA-----AAL---AALQALGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCH-----HHH---HHHHhccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 56999999999999999999999999999999983 222 23334567889999999999888643 489
Q ss_pred EEEEcccchh---------------------hhhHHHHHHHHHHc--CCccEEcc-CC-CCCCccccCCCCCCcchhhHH
Q 021596 79 VVISTVGHAL---------------------LADQVKIIAAIKEA--GNVTRFFP-SE-FGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 79 ~Vi~~a~~~~---------------------~~~~~~~~~aa~~~--~~v~~~v~-s~-~~~~~~~~~~~~~~~~~~y~~ 133 (310)
+|||+++... +.++.++++++... ..-.++++ ++ .+..... +.. ....|+.
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~-~~~~Y~~ 148 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---TGT-TGWLYRA 148 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---cCC-CccccHH
Confidence 9999998751 34456666666541 00123444 33 2222111 111 1236999
Q ss_pred HHHHHHHHHHHc-----CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEAE-----GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~~-----~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+++.. ++++..++||++...... + ......++.+..+..++..
T Consensus 149 sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~--~~~~~~~~~~~~~~~~~~~ 203 (222)
T PRK06953 149 SKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A--QAALDPAQSVAGMRRVIAQ 203 (222)
T ss_pred hHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C--CCCCCHHHHHHHHHHHHHh
Confidence 999999888753 556777778776554211 0 1235678888888887754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-12 Score=109.71 Aligned_cols=201 Identities=12% Similarity=0.088 Sum_probs=121.3
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+ +.||.++++.|+++|++|+++.|+.... ....+..+.+....+..+.+|+.|.+++.++++
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 3689999997 8999999999999999999988863221 111112222223457789999999999887765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+++|+++... ......+.+++... .+-.++|. |+..... ..|...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------~~~~~~ 159 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER------VVQNYN 159 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc------CCCCCc
Confidence 4899999997531 11122233333321 10135655 4433221 123356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..+.||.+........... ... ............+..++|+|.+++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~~-~~~~~~~~p~~r~~~p~~va~~~~~ 233 (257)
T PRK08594 160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-----NSI-LKEIEERAPLRRTTTQEEVGDTAAF 233 (257)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-----cHH-HHHHhhcCCccccCCHHHHHHHHHH
Confidence 899999999887753 478899999998876532111000 000 0000000011246778999999999
Q ss_pred HhcCCc--cCCceEEEc
Q 021596 203 AVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~ 217 (310)
++.+.. ..|..+.+.
T Consensus 234 l~s~~~~~~tG~~~~~d 250 (257)
T PRK08594 234 LFSDLSRGVTGENIHVD 250 (257)
T ss_pred HcCcccccccceEEEEC
Confidence 886532 234555553
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-12 Score=107.42 Aligned_cols=167 Identities=14% Similarity=0.083 Sum_probs=107.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... .. +.........+.+|++|.+++.+.+.++|++||+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN----NS---ESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh----hh---hhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 3789999999999999999999999999999998421 11 1111122367889999999999999899999999
Q ss_pred ccchh----------------hhhHHHHHHHHHHc-------CCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHH
Q 021596 84 VGHAL----------------LADQVKIIAAIKEA-------GNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 84 a~~~~----------------~~~~~~~~~aa~~~-------~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
||... ..+..++++++... +....++.++.+.. . + +....|+.+|+..+.
T Consensus 87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~----~-~--~~~~~Y~aSKaal~~ 159 (245)
T PRK12367 87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI----Q-P--ALSPSYEISKRLIGQ 159 (245)
T ss_pred CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc----C-C--CCCchhHHHHHHHHH
Confidence 98632 33344555554331 10123344443221 1 1 124579999999753
Q ss_pred HH---H-------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 141 AV---E-------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 141 ~l---~-------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+. + ..++.+..+.||.+...+ . ....+.++|+|+.+...+..++
T Consensus 160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------~------------~~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 160 LVSLKKNLLDKNERKKLIIRKLILGPFRSEL------------N------------PIGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHhhcccccEEEEecCCCccccc------------C------------ccCCCCHHHHHHHHHHHHhcCC
Confidence 22 1 135555666665542211 0 0124678999999999997653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.8e-13 Score=109.33 Aligned_cols=182 Identities=14% Similarity=0.145 Sum_probs=117.4
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
|+||||+|+||.++++.|+++|++|+++.|+.+. ......+.+.. ..+.++.+|+.|.+++.++++ +.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRS---DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999998876321 11222233332 357889999999999887765 47
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHHH-----HcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAIK-----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa~-----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
|+++|+++... ..++.++++++. +.+ ..++|+ |+..... + .+....|+
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~-----~-~~~~~~Y~ 150 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVM-----G-NRGQVNYS 150 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhcc-----C-CCCCcchH
Confidence 99999998532 334455556542 233 456665 4432211 1 12346799
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .+++++.++|+.+...+....... . ....... ....+...+|+|+++..++.
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~~~~~----~~~~~~~~~~va~~~~~l~~ 221 (239)
T TIGR01831 151 AAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----L-DEALKTV----PMNRMGQPAEVASLAGFLMS 221 (239)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----H-HHHHhcC----CCCCCCCHHHHHHHHHHHcC
Confidence 999987766543 478899999998876654322110 0 0000000 01235678999999999987
Q ss_pred CC
Q 021596 206 DP 207 (310)
Q Consensus 206 ~~ 207 (310)
++
T Consensus 222 ~~ 223 (239)
T TIGR01831 222 DG 223 (239)
T ss_pred ch
Confidence 54
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=124.14 Aligned_cols=175 Identities=15% Similarity=0.275 Sum_probs=121.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.. +. +..+.+. ...+.++.+|+.|.+++.++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGE-----ALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999832 22 1222232 2357889999999999988876
Q ss_pred --CCCEEEEcccchh---------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHAL---------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~~---------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||++|... ..+. ..++..+++.+ ..++|+ |+.+... ..|.
T Consensus 446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~ 518 (657)
T PRK07201 446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQT------NAPR 518 (657)
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcC------CCCC
Confidence 5899999998531 1122 23344445555 567776 5543221 1233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .+++++.++||.+...+.... .. .. .....+++++|+.+
T Consensus 519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~----------~~---~~----~~~~~~~~~~a~~i 581 (657)
T PRK07201 519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT----------KR---YN----NVPTISPEEAADMV 581 (657)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc----------cc---cc----CCCCCCHHHHHHHH
Confidence 56799999999887753 489999999998876543211 00 00 12357899999999
Q ss_pred HHHhcCC
Q 021596 201 IKAVDDP 207 (310)
Q Consensus 201 ~~~l~~~ 207 (310)
+..+...
T Consensus 582 ~~~~~~~ 588 (657)
T PRK07201 582 VRAIVEK 588 (657)
T ss_pred HHHHHhC
Confidence 9987643
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=107.71 Aligned_cols=180 Identities=16% Similarity=0.209 Sum_probs=115.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc---CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN---LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~---~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
|+++||||++.||..+++.|. +|++|+++.|+.+.. .+..+.+.. ..+.++.+|+.|.++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~----~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAA----QGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHH----HHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 579999999999999999998 599999999984221 122233332 236789999999998887654
Q ss_pred -CCCEEEEcccchh-------------------hhhHH----HHHHHHHHcCCccEEcc-CC-CCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-------------------LADQV----KIIAAIKEAGNVTRFFP-SE-FGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~~ 129 (310)
++|++||++|... ..... .++..+.+.+.-.++|. || .+.. ..+...
T Consensus 76 g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-------~~~~~~ 148 (246)
T PRK05599 76 GEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-------ARRANY 148 (246)
T ss_pred CCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-------CCcCCc
Confidence 5899999998742 01111 22233433321245555 44 3321 122356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++..+.||.+...+..... .. . -...++|+|+.++.
T Consensus 149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------~~--------~---~~~~pe~~a~~~~~ 209 (246)
T PRK05599 149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------PA--------P---MSVYPRDVAAAVVS 209 (246)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------CC--------C---CCCCHHHHHHHHHH
Confidence 899999998777653 4678888889887665322110 00 0 02568999999999
Q ss_pred HhcCCccCCceEEE
Q 021596 203 AVDDPRTLNKNLYI 216 (310)
Q Consensus 203 ~l~~~~~~~~~~~~ 216 (310)
.+..+.. ++.+.+
T Consensus 210 ~~~~~~~-~~~~~~ 222 (246)
T PRK05599 210 AITSSKR-STTLWI 222 (246)
T ss_pred HHhcCCC-CceEEe
Confidence 9987542 334444
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.2e-12 Score=103.75 Aligned_cols=176 Identities=18% Similarity=0.174 Sum_probs=113.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~d~V 80 (310)
|+++||||+|.||+++++.|+++|++|+++.|+ .++.... ....+++++++|+.|.+++.++++ ++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~-----~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR-----RDDLEVA--AKELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH--HHhccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 479999999999999999999999999999998 3232111 122357889999999999988876 58999
Q ss_pred EEcccchh------------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 81 ISTVGHAL------------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 81 i~~a~~~~------------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
||+++... ..+...+++++... .+-.++|. |+.. .+....|+.+
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----------~~~~~~Y~as 143 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----------PPAGSAEAAI 143 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----------CCCccccHHH
Confidence 99986310 22223333333321 00135554 4432 1124679999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|+..+.+.+. .++++..+.||.+....... ... . +.-.++|+++++..++..+
T Consensus 144 Kaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~--------~~~----------~--p~~~~~~ia~~~~~l~s~~ 203 (223)
T PRK05884 144 KAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG--------LSR----------T--PPPVAAEIARLALFLTTPA 203 (223)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh--------ccC----------C--CCCCHHHHHHHHHHHcCch
Confidence 9998877753 47888899998875432110 000 0 1126799999999988653
Q ss_pred -c-cCCceEEEc
Q 021596 208 -R-TLNKNLYIQ 217 (310)
Q Consensus 208 -~-~~~~~~~~~ 217 (310)
. ..|+.+.+.
T Consensus 204 ~~~v~G~~i~vd 215 (223)
T PRK05884 204 ARHITGQTLHVS 215 (223)
T ss_pred hhccCCcEEEeC
Confidence 2 234555553
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.7e-13 Score=99.92 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=111.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
||..+|+||||-.|+-+++.+++.+ .+|+++.|+.... + -....+..+..|+...+++...++++|+.|
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-~--------at~k~v~q~~vDf~Kl~~~a~~~qg~dV~F 88 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-P--------ATDKVVAQVEVDFSKLSQLATNEQGPDVLF 88 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-c--------cccceeeeEEechHHHHHHHhhhcCCceEE
Confidence 6899999999999999999999998 4899999984321 1 113467788899999999999999999999
Q ss_pred Ecccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 021596 82 STVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIP 148 (310)
Q Consensus 82 ~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~ 148 (310)
++.|.+. -.-...+.++|++.| +++|+. ||-|.+.. . .-.|-..|.++|+-+.+..++
T Consensus 89 caLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~s------S--rFlY~k~KGEvE~~v~eL~F~ 159 (238)
T KOG4039|consen 89 CALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPS------S--RFLYMKMKGEVERDVIELDFK 159 (238)
T ss_pred EeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCcc------c--ceeeeeccchhhhhhhhcccc
Confidence 9988765 344567888999999 999998 88776532 1 245668999999999988876
Q ss_pred -EEEEecceeccc
Q 021596 149 -YTYVESYCFDGY 160 (310)
Q Consensus 149 -~~i~rp~~~~~~ 160 (310)
++|+|||...+.
T Consensus 160 ~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 160 HIIILRPGPLLGE 172 (238)
T ss_pred EEEEecCcceecc
Confidence 778899988753
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=108.24 Aligned_cols=203 Identities=15% Similarity=0.061 Sum_probs=120.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+.+.......+..+.+|+.|.+++.++++ +
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA-----AGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999999999973 23222222112347889999999988877665 5
Q ss_pred CCEEEEcccchh------------------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCCCcch
Q 021596 77 VDVVISTVGHAL------------------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
+|++||++|... ..+...+++++...- .-.++|+ ++..... + .+...
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-----~-~~~~~ 153 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-----P-NGGGP 153 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-----C-CCCCc
Confidence 799999997521 222345555554321 0123444 3322211 1 12346
Q ss_pred hhHHHHHHHHHHHHH----c--CCCEEEEecceeccccccccCC-CCCCCCCCCeE-EEecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKARIRRAVEA----E--GIPYTYVESYCFDGYFLPNLLQ-PGAAAPPRDKV-VILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~--~~~~~i~rp~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|...+.+.+. . .+++..+.||.+...+...... ........... ...........+..++|+|+++.
T Consensus 154 ~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~ 233 (262)
T TIGR03325 154 LYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYV 233 (262)
T ss_pred hhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhhee
Confidence 799999999988754 1 3677788888876654321100 00000000000 00000001124667899999988
Q ss_pred HHhcCCc---cCCceEEEc
Q 021596 202 KAVDDPR---TLNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~---~~~~~~~~~ 217 (310)
.++.++. ..|.++.+.
T Consensus 234 ~l~s~~~~~~~tG~~i~vd 252 (262)
T TIGR03325 234 FFATRGDTVPATGAVLNYD 252 (262)
T ss_pred eeecCCCcccccceEEEec
Confidence 8876532 245555554
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.6e-13 Score=102.93 Aligned_cols=232 Identities=11% Similarity=0.135 Sum_probs=155.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCC-EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHP-TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~ 79 (310)
..+|||||+-|.+|..+++.|..+ |.+ |+.-+-..+.. .. -..-.++-.|+.|...++++.- .+|.
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--------~V--~~~GPyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--------NV--TDVGPYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--------hh--cccCCchhhhhhccccHHHhhcccccce
Confidence 469999999999999999998765 544 44332221111 01 1123456788889888888775 5899
Q ss_pred EEEcccchh--------------hhhHHHHHHHHHHcCCccEEccCCCCCCcccc-CCC-----CCCcchhhHHHHHHHH
Q 021596 80 VISTVGHAL--------------LADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA-HGA-----VEPAKSVYYDVKARIR 139 (310)
Q Consensus 80 Vi~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~-~~~-----~~~~~~~y~~~K~~~e 139 (310)
.+|..+..+ +.+..|+++.|++++ .+.||+|+.|...... ..| ...+...||.+|..+|
T Consensus 114 L~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAE 192 (366)
T KOG2774|consen 114 LVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAE 192 (366)
T ss_pred eeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHH
Confidence 999665433 788899999999998 9999998765532111 001 1114677999999987
Q ss_pred HHHH----HcCCCEEEEe-cceeccc----cccccCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 140 RAVE----AEGIPYTYVE-SYCFDGY----FLPNLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 140 ~~l~----~~~~~~~i~r-p~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
-+-+ +.|+++-.+| |+.+... .........+ ..+.+++-..+-.+|.+.++++.+|+-+++.+.+..+.
T Consensus 193 L~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~ 272 (366)
T KOG2774|consen 193 LLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQ 272 (366)
T ss_pred HHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHH
Confidence 6554 4688999999 5544321 1111110000 11345555666678899999999999999999886653
Q ss_pred -cCCceEEEcCCCCccCHHHHHHHHHHHh-CCCceeeecCHH
Q 021596 209 -TLNKNLYIQPPGNIYSFNDLVSLWERKI-GKTLEREYVSEE 248 (310)
Q Consensus 209 -~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~~~~~~~~~ 248 (310)
...++||+. +-..|..|+++.+.+.. |.++.+..-+..
T Consensus 273 ~lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y~~~srq 312 (366)
T KOG2774|consen 273 SLKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDYDICTRQ 312 (366)
T ss_pred Hhhhheeeec--eeccCHHHHHHHHHhhCCCceeecccchhh
Confidence 356788886 44799999999999987 455555544443
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.6e-12 Score=105.92 Aligned_cols=172 Identities=19% Similarity=0.194 Sum_probs=110.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~ 79 (310)
|+|+||||+|+||+++++.|+++| ..|....|+... ......+.++++|++|.++++++.+ ++|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~ 70 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW 70 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 589999999999999999999986 455555554221 1123567889999999998776544 7899
Q ss_pred EEEcccchh-----------------------------hhhHHHHHHHHHHcCCccEEcc-CC-CCCCccccCCCCCCcc
Q 021596 80 VISTVGHAL-----------------------------LADQVKIIAAIKEAGNVTRFFP-SE-FGNDVDRAHGAVEPAK 128 (310)
Q Consensus 80 Vi~~a~~~~-----------------------------~~~~~~~~~aa~~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~ 128 (310)
|||++|... ...++.++..+++.+ ..+++. |+ .+..... + .+..
T Consensus 71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~---~-~~~~ 145 (235)
T PRK09009 71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDN---R-LGGW 145 (235)
T ss_pred EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccC---C-CCCc
Confidence 999998752 111223333344333 345544 43 3321111 1 2234
Q ss_pred hhhHHHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 129 SVYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
..|+.+|+.++.+.+. .++.+..+.||.+......... . ......+..++|+|++
T Consensus 146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~--------~~~~~~~~~~~~~a~~ 209 (235)
T PRK09009 146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ--------Q--------NVPKGKLFTPEYVAQC 209 (235)
T ss_pred chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--------h--------ccccCCCCCHHHHHHH
Confidence 6899999999887753 2566777788877665322110 0 0011235788999999
Q ss_pred HHHHhcCC
Q 021596 200 TIKAVDDP 207 (310)
Q Consensus 200 ~~~~l~~~ 207 (310)
+..++..+
T Consensus 210 ~~~l~~~~ 217 (235)
T PRK09009 210 LLGIIANA 217 (235)
T ss_pred HHHHHHcC
Confidence 99999765
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.2e-12 Score=106.05 Aligned_cols=195 Identities=11% Similarity=0.073 Sum_probs=120.4
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCC------CCc-hhhHhHhhhcC--CcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLS------APS-KSQLLDHFKNL--GVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~------~~~-~~~~~~~l~~~--~~~~v~~D~~d~~~~~~ 72 (310)
.++|+||||+| .||.++++.|+++|++|++..|+.... ... .....+.+... .+.++.+|+.|.+++.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~ 85 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE 85 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 37899999995 899999999999999998876432110 011 11122233332 46788999999999888
Q ss_pred Hhc-------CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccC
Q 021596 73 AIK-------QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 73 ~~~-------~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~ 121 (310)
+++ ++|++||+++... ...+..++..+++.+ -.++|+ |+....
T Consensus 86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~----- 159 (256)
T PRK12859 86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQ----- 159 (256)
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccC-----
Confidence 775 4799999998542 122233445555444 357776 443221
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKED 194 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 194 (310)
...+....|+.+|...+.+.+. .+++++.++||.+...+...... ....... ....+..++
T Consensus 160 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~-------~~~~~~~----~~~~~~~~~ 227 (256)
T PRK12859 160 -GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIK-------QGLLPMF----PFGRIGEPK 227 (256)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHH-------HHHHhcC----CCCCCcCHH
Confidence 1123467899999999877643 47889999999886643211000 0000000 011345789
Q ss_pred hHHHHHHHHhcCC-cc-CCceEEE
Q 021596 195 DIATYTIKAVDDP-RT-LNKNLYI 216 (310)
Q Consensus 195 D~a~~~~~~l~~~-~~-~~~~~~~ 216 (310)
|+|+++..++... .. .|+.+.+
T Consensus 228 d~a~~~~~l~s~~~~~~~G~~i~~ 251 (256)
T PRK12859 228 DAARLIKFLASEEAEWITGQIIHS 251 (256)
T ss_pred HHHHHHHHHhCccccCccCcEEEe
Confidence 9999999988653 22 3444444
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.5e-12 Score=110.70 Aligned_cols=169 Identities=14% Similarity=0.110 Sum_probs=107.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+++|+||||+|+||+++++.|.++|++|++++|+.. +......-....+..+.+|+.|.+++.+.+.++|++||+
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~-----~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSD-----KITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 478999999999999999999999999999999732 221100001224678899999999999999999999999
Q ss_pred ccchh----------------hhhHHHHHHHHH----HcCC--c-cEEccCCCCCCccccCCCCCCcchhhHHHHHHHHH
Q 021596 84 VGHAL----------------LADQVKIIAAIK----EAGN--V-TRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 84 a~~~~----------------~~~~~~~~~aa~----~~~~--v-~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|... ..++.++++++. +.+. . ..+|.++-+. .. + +....|+.+|.....
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~----~~-~--~~~~~Y~ASKaAl~~ 325 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE----VN-P--AFSPLYELSKRALGD 325 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc----cc-C--CCchHHHHHHHHHHH
Confidence 98642 344455555543 3221 1 1234432211 11 1 224579999999987
Q ss_pred HHH--H--cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 141 AVE--A--EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 141 ~l~--~--~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+.. . .++.+..+.|+.+... . + +...++++|+|+.++..++.++
T Consensus 326 l~~l~~~~~~~~I~~i~~gp~~t~------------~-~-----------~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 326 LVTLRRLDAPCVVRKLILGPFKSN------------L-N-----------PIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHhCCCCceEEEEeCCCcCC------------C-C-----------cCCCCCHHHHHHHHHHHHHCCC
Confidence 542 2 2333333334332111 0 0 0124688999999999997653
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=111.52 Aligned_cols=173 Identities=20% Similarity=0.190 Sum_probs=112.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhc----CCcEEEEccCCC--HHHHH---HH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKN----LGVNFVVGDVLN--HESLV---NA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~----~~~~~v~~D~~d--~~~~~---~~ 73 (310)
.+.++||||||.||+++++.|.++|++|++++|+. ++.+. .+++.. ..+..+.+|+.+ .+.+. +.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~-----~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNP-----DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCH-----HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 36899999999999999999999999999999983 33322 223322 235677889874 33333 33
Q ss_pred hcC--CCEEEEcccchh---------------------hhhHHHHHH----HHHHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 74 IKQ--VDVVISTVGHAL---------------------LADQVKIIA----AIKEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 74 ~~~--~d~Vi~~a~~~~---------------------~~~~~~~~~----aa~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
+.+ +|++||+||... ..++..+.+ .+.+.+ ..++|. ||...... +..
T Consensus 128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~----~~~ 202 (320)
T PLN02780 128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVI----PSD 202 (320)
T ss_pred hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC----CCC
Confidence 443 569999998531 222333333 344455 467776 44322110 122
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|...+.+.+. .|++++.+.||.+..++... ... . ....+++++|+
T Consensus 203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~---------~~~--------~--~~~~~p~~~A~ 263 (320)
T PLN02780 203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI---------RRS--------S--FLVPSSDGYAR 263 (320)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc---------cCC--------C--CCCCCHHHHHH
Confidence 4467899999999877653 47899999999887654220 000 0 11357889999
Q ss_pred HHHHHhc
Q 021596 199 YTIKAVD 205 (310)
Q Consensus 199 ~~~~~l~ 205 (310)
.++..+.
T Consensus 264 ~~~~~~~ 270 (320)
T PLN02780 264 AALRWVG 270 (320)
T ss_pred HHHHHhC
Confidence 9999885
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6e-12 Score=105.95 Aligned_cols=196 Identities=12% Similarity=0.067 Sum_probs=119.0
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-c-CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-N-LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~-~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.+.++||||++ .||..+++.|+++|++|++..|+.. ..+..+.+. . .....+.+|++|.+++.++++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-----~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-----LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-----HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 36899999997 9999999999999999999888631 111122221 1 124568899999999887765
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
.+|++||+||... ..+..++.+++... . -.++|. |+.... ...|
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~G~Iv~isS~~~~------~~~~ 154 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-GGSMLTLTYGGST------RVMP 154 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-CceEEEEcCCCcc------ccCC
Confidence 5899999998531 22223333333221 1 135555 433221 1123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|+..+.+.+. .|+++..|.||.+...+...+... .. .............+..++|+|.+
T Consensus 155 ~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-----~~-~~~~~~~~~p~~r~~~peeva~~ 228 (271)
T PRK06505 155 NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-----RA-IFSYQQRNSPLRRTVTIDEVGGS 228 (271)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-----HH-HHHHHhhcCCccccCCHHHHHHH
Confidence 356799999998877753 478899999998876432111000 00 00000000011235678999999
Q ss_pred HHHHhcCCc--cCCceEEEc
Q 021596 200 TIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~ 217 (310)
++.++.+.. ..|..+.+.
T Consensus 229 ~~fL~s~~~~~itG~~i~vd 248 (271)
T PRK06505 229 ALYLLSDLSSGVTGEIHFVD 248 (271)
T ss_pred HHHHhCccccccCceEEeec
Confidence 999886532 235555554
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-12 Score=107.48 Aligned_cols=137 Identities=17% Similarity=0.153 Sum_probs=100.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||.++++.|+++|++|+++.|+.... ....+.++.+|+.|.+++.++++ +
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999884322 12367889999999999887765 5
Q ss_pred CCEEEEcccchh----------------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCC
Q 021596 77 VDVVISTVGHAL----------------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 77 ~d~Vi~~a~~~~----------------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
+|++||+++... +.+...+++++.. .+ -.++|+ |+.....
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------ 150 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLE------ 150 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccC------
Confidence 799999998521 2333445555543 33 346666 4433221
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceec
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFD 158 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~ 158 (310)
..+....|+.+|...+.+.+. .++++..++||.+.
T Consensus 151 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 151 GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 122357899999999877754 47889999999874
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-12 Score=107.04 Aligned_cols=195 Identities=15% Similarity=0.109 Sum_probs=119.2
Q ss_pred ceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||++ .||+++++.|+++|++|+++.|+.. ..+..+.+.. ..+..+.+|+.|+++++++++
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-----LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-----HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence 6899999985 8999999999999999998888621 1122233322 346678999999999988775
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
.+|++||++|... ..+...+.+++... . -.++|. |+.+.. ...|
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~iss~~~~------~~~~ 154 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAE------RAIP 154 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-CcEEEEEecCCCC------CCCC
Confidence 4799999998431 11122233333221 1 134555 544432 1123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++..+.||.+.......... . ...............+..++|+|.+
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-----~-~~~~~~~~~~~p~~r~~~pedva~~ 228 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-----F-RKMLAHCEAVTPIRRTVTIEDVGNS 228 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-----h-HHHHHHHHHcCCCcCCCCHHHHHHH
Confidence 356899999999887763 47888888998886532111000 0 0000000000011246788999999
Q ss_pred HHHHhcCC--ccCCceEEEc
Q 021596 200 TIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 200 ~~~~l~~~--~~~~~~~~~~ 217 (310)
++.++.+. ...|..+.+.
T Consensus 229 ~~~L~s~~~~~itG~~i~vd 248 (262)
T PRK07984 229 AAFLCSDLSAGISGEVVHVD 248 (262)
T ss_pred HHHHcCcccccccCcEEEEC
Confidence 99988653 2245555554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-12 Score=115.64 Aligned_cols=196 Identities=16% Similarity=0.147 Sum_probs=123.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|.||..+++.|.++|++|+++.|... .....+.....+...+.+|++|.+++.++++ +
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-----~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-----GEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-----HHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999999999988522 1111111223356788999999998887765 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHcC---CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEAG---NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~---~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
+|+|||+++... +.++.++.+++.... +-.++|+ |+..... ..+....|+.
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~------g~~~~~~Y~a 358 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA------GNRGQTNYAA 358 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC------CCCCChHHHH
Confidence 899999998642 445566777776532 0246665 5432211 1123578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .++.+..+.||.+.......+... .... .... ........++|+|+++..++..
T Consensus 359 sKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~-~~~~-~~~~------~~l~~~~~p~dva~~~~~l~s~ 430 (450)
T PRK08261 359 SKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA-TREA-GRRM------NSLQQGGLPVDVAETIAWLASP 430 (450)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh-HHHH-Hhhc------CCcCCCCCHHHHHHHHHHHhCh
Confidence 99987766643 578899999998754322111000 0000 0000 0111234567999999988864
Q ss_pred Cc--cCCceEEEcC
Q 021596 207 PR--TLNKNLYIQP 218 (310)
Q Consensus 207 ~~--~~~~~~~~~~ 218 (310)
.. ..|+.+.+.|
T Consensus 431 ~~~~itG~~i~v~g 444 (450)
T PRK08261 431 ASGGVTGNVVRVCG 444 (450)
T ss_pred hhcCCCCCEEEECC
Confidence 32 2366666754
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.4e-12 Score=101.27 Aligned_cols=166 Identities=22% Similarity=0.231 Sum_probs=113.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~Vi 81 (310)
|+++||||+|.||.++++.|.++ ++|+++.|+.. .+++|+.|.++++++++ ++|++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999999 99999998721 35789999999988887 689999
Q ss_pred Ecccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHH
Q 021596 82 STVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 82 ~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e 139 (310)
|++|... ..++.++++++... + ..+++. |+.... ...|....|+.+|...+
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~------~~~~~~~~Y~~sK~a~~ 133 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSD------EPIPGGASAATVNGALE 133 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccC------CCCCCchHHHHHHHHHH
Confidence 9998632 23344566665432 2 234555 433221 11234568999999988
Q ss_pred HHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 140 RAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 140 ~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
.+.+. .++++..+.||++-..... . .. ... + ..++.++|+|+++..+++... .|++
T Consensus 134 ~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~-~---------~~--~~~--~---~~~~~~~~~a~~~~~~~~~~~-~g~~ 195 (199)
T PRK07578 134 GFVKAAALELPRGIRINVVSPTVLTESLEK-Y---------GP--FFP--G---FEPVPAARVALAYVRSVEGAQ-TGEV 195 (199)
T ss_pred HHHHHHHHHccCCeEEEEEcCCcccCchhh-h---------hh--cCC--C---CCCCCHHHHHHHHHHHhccce-eeEE
Confidence 77653 4677888888877543210 0 00 001 1 136789999999999987542 3444
Q ss_pred EE
Q 021596 214 LY 215 (310)
Q Consensus 214 ~~ 215 (310)
++
T Consensus 196 ~~ 197 (199)
T PRK07578 196 YK 197 (199)
T ss_pred ec
Confidence 43
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.3e-12 Score=106.28 Aligned_cols=197 Identities=13% Similarity=0.082 Sum_probs=119.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC----CCCch-hhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSK-SQLLDHFKN--LGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~-~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~- 75 (310)
.++++||||++.||.++++.|+++|++|+++.|+.+. ....+ ....+.+.. ..+.++.+|+.|.+++.++++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA 85 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence 3789999999999999999999999999998876410 00111 122233332 246788999999998887664
Q ss_pred ------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCC-----ccEEcc-CCCCCCcccc
Q 021596 76 ------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGN-----VTRFFP-SEFGNDVDRA 120 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~-----v~~~v~-s~~~~~~~~~ 120 (310)
++|++||+||... ..+...+.+++ ++... -.++|+ |+.....
T Consensus 86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--- 162 (286)
T PRK07791 86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ--- 162 (286)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc---
Confidence 5899999998642 22233333333 22210 135665 5433221
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeecc
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 193 (310)
..+....|+.+|...+.+.+. .|+++..|.|+ +........... .... .. .....+..+
T Consensus 163 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~----~~~~----~~--~~~~~~~~p 228 (286)
T PRK07791 163 ---GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE----MMAK----PE--EGEFDAMAP 228 (286)
T ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH----HHhc----Cc--ccccCCCCH
Confidence 122356899999998877653 57888899997 322211110000 0000 00 111235679
Q ss_pred chHHHHHHHHhcCC--ccCCceEEEc
Q 021596 194 DDIATYTIKAVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 194 ~D~a~~~~~~l~~~--~~~~~~~~~~ 217 (310)
+|+|.+++.++... ...|+.+.+.
T Consensus 229 edva~~~~~L~s~~~~~itG~~i~vd 254 (286)
T PRK07791 229 ENVSPLVVWLGSAESRDVTGKVFEVE 254 (286)
T ss_pred HHHHHHHHHHhCchhcCCCCcEEEEc
Confidence 99999999988643 2245555554
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.6e-12 Score=104.59 Aligned_cols=197 Identities=12% Similarity=0.072 Sum_probs=121.3
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+ +.||..+++.|+++|++|++..|+.... ...+.++++.. ..+.++.+|++|.+++.++++
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG--RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 3689999986 7999999999999999998887763321 11222333322 236688999999999887775
Q ss_pred ---CCCEEEEcccch------h-----------------hhhHHH----HHHHHHHcCCccEEcc-CCCCCCccccCCCC
Q 021596 76 ---QVDVVISTVGHA------L-----------------LADQVK----IIAAIKEAGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 ---~~d~Vi~~a~~~------~-----------------~~~~~~----~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|++||++|.. . ..+... ++..+++. .++|+ |+.... ..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~---g~Iv~isS~~~~------~~ 154 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG---GSIVTLTYLGGV------RA 154 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC---CeEEEEeccccc------cC
Confidence 589999999853 1 222223 33333332 35655 443322 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.|....|+.+|...+.+.+. .|+++..+.||.+...+...+... ... ............+..++|++
T Consensus 155 ~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-----~~~-~~~~~~~~p~~r~~~~~dva 228 (258)
T PRK07370 155 IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-----LDM-IHHVEEKAPLRRTVTQTEVG 228 (258)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-----hhh-hhhhhhcCCcCcCCCHHHHH
Confidence 23456899999999887764 468889999998876532211000 000 00000001112466789999
Q ss_pred HHHHHHhcCCc--cCCceEEEc
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~ 217 (310)
.++..++.++. -.|+.+.+.
T Consensus 229 ~~~~fl~s~~~~~~tG~~i~vd 250 (258)
T PRK07370 229 NTAAFLLSDLASGITGQTIYVD 250 (258)
T ss_pred HHHHHHhChhhccccCcEEEEC
Confidence 99999886532 234555553
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.5e-12 Score=106.99 Aligned_cols=202 Identities=16% Similarity=0.158 Sum_probs=120.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------~ 76 (310)
+.++|||| |+||+++++.|. +|++|++++|+... .....+.+.. ..+.++.+|+.|.+++.++++ +
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN----LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 68899997 799999999996 89999999997321 1122233333 246789999999999888775 5
Q ss_pred CCEEEEcccchh------------hhhHHHHHHHHHH----cCCccEEccCCCCCCccc--------------c---CCC
Q 021596 77 VDVVISTVGHAL------------LADQVKIIAAIKE----AGNVTRFFPSEFGNDVDR--------------A---HGA 123 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------~~~~~~~~~aa~~----~~~v~~~v~s~~~~~~~~--------------~---~~~ 123 (310)
+|++||+||... ..++.++++++.. .+ ...++.|+.+..... . ..+
T Consensus 77 id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
T PRK06940 77 VTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPALTAEQERALATTPTEELLSLP 155 (275)
T ss_pred CCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcccchhhhccccccccccccccc
Confidence 899999998643 4445555555543 23 222333433321100 0 000
Q ss_pred ------CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEe
Q 021596 124 ------VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVY 190 (310)
Q Consensus 124 ------~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (310)
..+....|+.+|+..+.+.+. .++++..+.||++........... .................+
T Consensus 156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~~r~ 231 (275)
T PRK06940 156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG----PRGDGYRNMFAKSPAGRP 231 (275)
T ss_pred cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC----CchHHHHHHhhhCCcccC
Confidence 001246799999998776642 478899999998876543211100 000000000000011246
Q ss_pred eccchHHHHHHHHhcCC-c-cCCceEEEc
Q 021596 191 NKEDDIATYTIKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~~-~-~~~~~~~~~ 217 (310)
..++|+|+++..++.+. . ..|..+.+-
T Consensus 232 ~~peeia~~~~fL~s~~~~~itG~~i~vd 260 (275)
T PRK06940 232 GTPDEIAALAEFLMGPRGSFITGSDFLVD 260 (275)
T ss_pred CCHHHHHHHHHHHcCcccCcccCceEEEc
Confidence 78899999999988643 2 235555554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.7e-12 Score=106.51 Aligned_cols=196 Identities=15% Similarity=0.118 Sum_probs=119.1
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+ +.||.++++.|+++|++|+++.|+.. ..+.++.+.. ..+.++.+|++|.+++.++++
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 84 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-----ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE 84 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-----hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence 3789999998 49999999999999999999998732 1111222211 235678999999999887765
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
.+|++||+|+... ..+...+.+++... .+-.++|. |+.+... ..+.
T Consensus 85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~------~~~~ 158 (258)
T PRK07533 85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK------VVEN 158 (258)
T ss_pred HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc------CCcc
Confidence 5899999998531 22223333333221 00124554 5443321 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..+.||.+...+...+... ...............+..++|+|.++
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dva~~~ 232 (258)
T PRK07533 159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDF------DALLEDAAERAPLRRLVDIDDVGAVA 232 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCc------HHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 56899999998877653 478899999998866543211100 00000000000112357789999999
Q ss_pred HHHhcCC--ccCCceEEE
Q 021596 201 IKAVDDP--RTLNKNLYI 216 (310)
Q Consensus 201 ~~~l~~~--~~~~~~~~~ 216 (310)
+.++.+. ...|+.+.+
T Consensus 233 ~~L~s~~~~~itG~~i~v 250 (258)
T PRK07533 233 AFLASDAARRLTGNTLYI 250 (258)
T ss_pred HHHhChhhccccCcEEee
Confidence 9998653 224555544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=108.34 Aligned_cols=197 Identities=14% Similarity=0.087 Sum_probs=118.4
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-c-CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-N-LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~-~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+ +.||..+++.|+++|++|++..|+.. ..+.++.+. . .....+.+|++|.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-----LKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-----HHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 4799999997 79999999999999999999988731 111112221 1 112678999999999887765
Q ss_pred ---CCCEEEEcccch------h-----------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHA------L-----------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~------~-----------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||.. . +.+...+.+++... ..-.++|. |+.+.. ...|.
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~------~~~~~ 153 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV------KYVPH 153 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc------cCCCc
Confidence 589999999852 1 22223333333321 00135555 554322 11233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|+..+.+.+. .|+++..+.||++........... ...............+..++|+|.++
T Consensus 154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~r~~~pedva~~v 227 (274)
T PRK08415 154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF------RMILKWNEINAPLKKNVSIEEVGNSG 227 (274)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh------hHHhhhhhhhCchhccCCHHHHHHHH
Confidence 56799999998877653 478888999998865322111000 00000000000112367789999999
Q ss_pred HHHhcCC-c-cCCceEEEc
Q 021596 201 IKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~-~-~~~~~~~~~ 217 (310)
+.++.+. . ..|..+.+.
T Consensus 228 ~fL~s~~~~~itG~~i~vd 246 (274)
T PRK08415 228 MYLLSDLSSGVTGEIHYVD 246 (274)
T ss_pred HHHhhhhhhcccccEEEEc
Confidence 9998653 2 235555554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.6e-12 Score=106.08 Aligned_cols=195 Identities=14% Similarity=0.091 Sum_probs=119.3
Q ss_pred ceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++|||| ++.||.++++.|+++|++|++..|+.. ..+.++++.. .....+++|+.|.+++.++++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-----LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-----HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence 68999997 679999999999999999998877521 1222233322 235678999999999888775
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHH---cCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKE---AGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~---~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+||... ..+...+.+++.. .+ -.++|. |+.+... ..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~------~~ 154 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVR------AI 154 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccccc------CC
Confidence 5899999998631 1111122232221 11 135555 5443321 12
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|...+.+.+. .|+++..+.||.+.......+... ...............+..++|+|+
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~peevA~ 228 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF------GKLLGHVAAHNPLRRNVTIEEVGN 228 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch------HHHHHHHhhcCCCCCCCCHHHHHH
Confidence 3456799999999877653 578899999998876532211100 000000000011124678999999
Q ss_pred HHHHHhcCC-c-cCCceEEEc
Q 021596 199 YTIKAVDDP-R-TLNKNLYIQ 217 (310)
Q Consensus 199 ~~~~~l~~~-~-~~~~~~~~~ 217 (310)
++..++.+. . ..|..+.+.
T Consensus 229 ~v~~l~s~~~~~~tG~~i~vd 249 (261)
T PRK08690 229 TAAFLLSDLSSGITGEITYVD 249 (261)
T ss_pred HHHHHhCcccCCcceeEEEEc
Confidence 999999753 2 234544443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=106.20 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=121.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc-CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN-LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
|+++||||+|.||+.+++.|+++|++|+++.|+.. +. ...+.+.. ..+.++.+|+.|.+++.++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEE-----NLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 58999999999999999999999999999999832 22 12233322 357889999999999887774
Q ss_pred CCCEEEEcccchh---------------------hhh----HHHHHHHHH-HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 QVDVVISTVGHAL---------------------LAD----QVKIIAAIK-EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~----~~~~~~aa~-~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||++|... ... +..++..+. +.+ -.++|+ |+.... ...|..
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 148 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVK------EPMPPL 148 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccC------CCCCCc
Confidence 5899999998531 001 122333333 223 356766 443321 112335
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccc-cC---CCCCCCCCCC-eEEEecCCCceeEeeccchH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPN-LL---QPGAAAPPRD-KVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~-~~---~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~ 196 (310)
..|+.+|...+.+.+. .|+++..+.||.+....... +. .......... .-.... ......+..++|+
T Consensus 149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dv 227 (259)
T PRK08340 149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE-RTPLKRTGRWEEL 227 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc-cCCccCCCCHHHH
Confidence 6899999999887764 46788888898876653311 00 0000000000 000000 0011246778999
Q ss_pred HHHHHHHhcCC-cc-CCceEEEc
Q 021596 197 ATYTIKAVDDP-RT-LNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~-~~-~~~~~~~~ 217 (310)
|++++.++.++ .. .|.++.+.
T Consensus 228 a~~~~fL~s~~~~~itG~~i~vd 250 (259)
T PRK08340 228 GSLIAFLLSENAEYMLGSTIVFD 250 (259)
T ss_pred HHHHHHHcCcccccccCceEeec
Confidence 99999988754 22 34444443
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2e-12 Score=111.10 Aligned_cols=152 Identities=11% Similarity=0.116 Sum_probs=100.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||||+||.++++.|+++|++|+++.|+.++. .+..+.+. ...+.++.+|+.|.++++++++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~----~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG----EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999984321 11222222 1247889999999999887765
Q ss_pred ---CCCEEEEcccchh------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccc-------cCC
Q 021596 76 ---QVDVVISTVGHAL------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDR-------AHG 122 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~-------~~~ 122 (310)
++|++||+||... ..+ +..++..+++.. .++|. ||....... ..
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~--~riv~vsS~~~~~~~~~~~~~~~~- 166 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR--ARVTSQSSIAARRGAINWDDLNWE- 166 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC--CCeEEEechhhcCCCcCccccccc-
Confidence 4899999998642 112 223333333332 35554 432211100 01
Q ss_pred CCCCcchhhHHHHHHHHHHHHH---------cCCCEEEEecceeccccc
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFL 162 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~ 162 (310)
...++...|+.+|...+.+.++ .++.+..+.||.+...+.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 1123356899999998776643 257788888998876643
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=108.12 Aligned_cols=195 Identities=13% Similarity=0.029 Sum_probs=114.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHH----HHHh---
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESL----VNAI--- 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~----~~~~--- 74 (310)
+.++||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ...+.++.+|+.|.+++ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAA---ASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 5799999999999999999999999999887653211 111223332 12356789999998754 3332
Q ss_pred ----cCCCEEEEcccchh------------------------------hhhHHHHHHHHHHcC---------CccEEcc-
Q 021596 75 ----KQVDVVISTVGHAL------------------------------LADQVKIIAAIKEAG---------NVTRFFP- 110 (310)
Q Consensus 75 ----~~~d~Vi~~a~~~~------------------------------~~~~~~~~~aa~~~~---------~v~~~v~- 110 (310)
.++|+|||+||... ..+...+++++.... +...++.
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 26899999998532 112334444433221 0123333
Q ss_pred CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC
Q 021596 111 SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD 183 (310)
Q Consensus 111 s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (310)
++.... ...+....|+.+|..++.+.+. .|++++.++||++.... ...... ...-....+
T Consensus 159 ~s~~~~------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~--~~~~~~---~~~~~~~~~-- 225 (267)
T TIGR02685 159 CDAMTD------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD--AMPFEV---QEDYRRKVP-- 225 (267)
T ss_pred hhhhcc------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc--ccchhH---HHHHHHhCC--
Confidence 222111 1123456899999999888764 57999999999874221 000000 000000000
Q ss_pred CCceeEeeccchHHHHHHHHhcCCc--cCCceEEEc
Q 021596 184 GNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 184 ~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
....+..++|++.+++.++.++. ..|+.+.+.
T Consensus 226 --~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~ 259 (267)
T TIGR02685 226 --LGQREASAEQIADVVIFLVSPKAKYITGTCIKVD 259 (267)
T ss_pred --CCcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence 00134688999999999886542 245555553
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.3e-12 Score=104.85 Aligned_cols=196 Identities=13% Similarity=0.093 Sum_probs=117.7
Q ss_pred ceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC-C-cEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL-G-VNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~-~-~~~v~~D~~d~~~~~~~~~----- 75 (310)
+.++||||++ .||.++++.|.++|++|++..|+. ...+.++.+... + ..++++|+.|++++.++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-----~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-----VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-----HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 6899999997 799999999999999999888762 112222333221 2 3457899999999888775
Q ss_pred --CCCEEEEcccch-------h----------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHA-------L----------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~-------~----------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+++|+++.. . ..+...+++++... ..-.++|. |+.+... ..|..
T Consensus 84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------~~~~~ 157 (260)
T PRK06603 84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------VIPNY 157 (260)
T ss_pred cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------CCCcc
Confidence 489999999752 1 22222333332211 00135555 4443321 12335
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|+..+.+.+. .++++..+.||.+...+...... ......... .......+..++|+|.+++
T Consensus 158 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-----~~~~~~~~~-~~~p~~r~~~pedva~~~~ 231 (260)
T PRK06603 158 NVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-----FSTMLKSHA-ATAPLKRNTTQEDVGGAAV 231 (260)
T ss_pred cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-----cHHHHHHHH-hcCCcCCCCCHHHHHHHHH
Confidence 6799999998877653 57888899999886543211100 000000000 0001123577899999999
Q ss_pred HHhcCCc-c-CCceEEEc
Q 021596 202 KAVDDPR-T-LNKNLYIQ 217 (310)
Q Consensus 202 ~~l~~~~-~-~~~~~~~~ 217 (310)
.++.+.. . .|..+.+-
T Consensus 232 ~L~s~~~~~itG~~i~vd 249 (260)
T PRK06603 232 YLFSELSKGVTGEIHYVD 249 (260)
T ss_pred HHhCcccccCcceEEEeC
Confidence 9997532 2 34445553
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.9e-12 Score=98.12 Aligned_cols=146 Identities=19% Similarity=0.266 Sum_probs=102.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++++|+||+|++|.++++.|.++|. .|..+.|+.... .......+.+.. ..+.++.+|+.+.+++.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA-PGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC-ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999996 678888875432 111111233322 346678999999988887765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
.+|.|+|+++... ..+..++++++++.+ .++++. |+.+.... .+....|+.+
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~------~~~~~~y~~s 152 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLG------NPGQANYAAA 152 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcC------CCCchhhHHH
Confidence 3699999998532 455677888887766 677766 44332211 1235678899
Q ss_pred HHHHHHHHHH---cCCCEEEEecceec
Q 021596 135 KARIRRAVEA---EGIPYTYVESYCFD 158 (310)
Q Consensus 135 K~~~e~~l~~---~~~~~~i~rp~~~~ 158 (310)
|...+.+.+. .+++.+.+.|+.+.
T Consensus 153 k~~~~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 153 NAFLDALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHHHHhcCCceEEEeecccc
Confidence 9999888753 57888888887653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-11 Score=114.19 Aligned_cols=186 Identities=17% Similarity=0.225 Sum_probs=117.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||++.||..+++.|.++|++|+++.|+.. +.+ ..+.+ ...+..+.+|+.|++++.++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVE-----RARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999832 222 11222 2356779999999999888775
Q ss_pred CCCEEEEcccchh---------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL---------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||++|... ..++..+++++. +.+.-.++|. |+..... ..+...
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~------~~~~~~ 152 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV------ALPKRT 152 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC------CCCCCc
Confidence 4899999998620 222333444443 3331126655 4433221 112356
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .+++++.+.||.+...+...+.... ..........-....+..++|+|+++..
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~v~~ 227 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAG-----KLDPSAVRSRIPLGRLGRPEEIAEAVFF 227 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccc-----hhhhHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999999887653 4788999999988665432211100 0000000000001135678999999988
Q ss_pred HhcC
Q 021596 203 AVDD 206 (310)
Q Consensus 203 ~l~~ 206 (310)
++.+
T Consensus 228 l~~~ 231 (520)
T PRK06484 228 LASD 231 (520)
T ss_pred HhCc
Confidence 8764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.6e-12 Score=104.16 Aligned_cols=195 Identities=13% Similarity=0.040 Sum_probs=118.5
Q ss_pred CceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++|||| ++.||.++++.|+++|++|+++.|+... ... ...+.+ ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~---~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL---RLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch---hHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999999 8999999999999999999999886321 111 111222 2357789999999999887764
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||++|... ..+...+.+++... .+-.++|. ++.+. ...|..
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-------~~~~~~ 155 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-------VAWPAY 155 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-------ccCCcc
Confidence 5899999998641 11222233333221 00124544 32221 112345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCcee--EeeccchHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKA--VYNKEDDIATY 199 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~D~a~~ 199 (310)
..|+.+|+....+.+. .|+++..+.||.+...+...+.. ..... ..+. ...+. .+..++|+|++
T Consensus 156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-----~~~~~-~~~~-~~~p~~~~~~~p~evA~~ 228 (256)
T PRK07889 156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-----FELLE-EGWD-ERAPLGWDVKDPTPVARA 228 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-----cHHHH-HHHH-hcCccccccCCHHHHHHH
Confidence 6789999998877653 57888899999887653221110 00000 0000 01111 36789999999
Q ss_pred HHHHhcCCc--cCCceEEE
Q 021596 200 TIKAVDDPR--TLNKNLYI 216 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~ 216 (310)
++.++.++. ..|..+.+
T Consensus 229 v~~l~s~~~~~~tG~~i~v 247 (256)
T PRK07889 229 VVALLSDWFPATTGEIVHV 247 (256)
T ss_pred HHHHhCcccccccceEEEE
Confidence 999987542 23444444
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=103.74 Aligned_cols=195 Identities=12% Similarity=0.101 Sum_probs=120.5
Q ss_pred ceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||+ +.||.++++.|+++|++|++..|+.. ..+.++.+.. .....+++|+.|.++++++++
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-----LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-----HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 689999997 79999999999999999988877521 1112222211 235678999999999888765
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... ..+...+++++... .+-.++|. |+.+.. ...|..
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------~~~p~~ 159 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE------KVMPHY 159 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc------cCCCcc
Confidence 4899999998531 33334455544432 10135554 554332 112345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC-CCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD-GNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|+..+.+.+. .++++..+.||.+........... ........ ......+..++|+|+++
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~p~~r~~~peevA~~~ 232 (272)
T PRK08159 160 NVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDF-------RYILKWNEYNAPLRRTVTIEEVGDSA 232 (272)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcc-------hHHHHHHHhCCcccccCCHHHHHHHH
Confidence 6799999998877753 478888999998866432111000 00000000 00112357889999999
Q ss_pred HHHhcCCc--cCCceEEEc
Q 021596 201 IKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~ 217 (310)
+.++.+.. ..|..+.+.
T Consensus 233 ~~L~s~~~~~itG~~i~vd 251 (272)
T PRK08159 233 LYLLSDLSRGVTGEVHHVD 251 (272)
T ss_pred HHHhCccccCccceEEEEC
Confidence 99996532 235555554
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.8e-12 Score=108.37 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=114.5
Q ss_pred eEEEEccCcchhHHHHHHHHh----CCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhcC-
Q 021596 6 KILSIGGTGYIGKFIVEASVK----AGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIKQ- 76 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~~- 76 (310)
.++||||+|.||.++++.|.+ .|++|+++.|+.... ....+.+.. ..+.++.+|+.|.+++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~----~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~ 77 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL----RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKAL 77 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH----HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHH
Confidence 689999999999999999997 799999999984321 112233322 2478889999999988877651
Q ss_pred ----------CCEEEEcccchh----------------------hhh----HHHHHHHHHHc-CCccEEcc-CCCCCCcc
Q 021596 77 ----------VDVVISTVGHAL----------------------LAD----QVKIIAAIKEA-GNVTRFFP-SEFGNDVD 118 (310)
Q Consensus 77 ----------~d~Vi~~a~~~~----------------------~~~----~~~~~~aa~~~-~~v~~~v~-s~~~~~~~ 118 (310)
.|++||++|... ..+ +..++.++++. +.-.++|+ |+....
T Consensus 78 ~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~-- 155 (256)
T TIGR01500 78 RELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAI-- 155 (256)
T ss_pred HhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhC--
Confidence 258999998521 111 22333444433 21235665 543321
Q ss_pred ccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEecCCCceeEe
Q 021596 119 RAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VILGDGNPKAVY 190 (310)
Q Consensus 119 ~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 190 (310)
...|....|+.+|...+.+.+. .++.+..+.||++-..+....... ...... ..+........+
T Consensus 156 ----~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 227 (256)
T TIGR01500 156 ----QPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREE----SVDPDMRKGLQELKAKGKL 227 (256)
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHh----cCChhHHHHHHHHHhcCCC
Confidence 1123356799999999887753 467888888998876543221110 000000 000000011236
Q ss_pred eccchHHHHHHHHhcC
Q 021596 191 NKEDDIATYTIKAVDD 206 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~ 206 (310)
..++|+|..++.++.+
T Consensus 228 ~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 228 VDPKVSAQKLLSLLEK 243 (256)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 7889999999999853
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.4e-11 Score=101.72 Aligned_cols=195 Identities=13% Similarity=0.080 Sum_probs=116.3
Q ss_pred ceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-c-CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-N-LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~-~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++|||| ++.||.++++.|+++|++|++..|.... .++. +.+. . .....+.+|+.|++++.++++
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRI---TEFAAEFGSDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHH---HHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence 68999996 6799999999999999999888664211 1111 2221 1 234568899999999988775
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... ..+...+.+++... .+-.++|. |+.+... ..|.
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~------~~~~ 155 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------VVPN 155 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc------CCCC
Confidence 5899999997531 11222233333321 10135555 5443321 1233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|+....+.+. .++++..+.||++.......... .......... ......+..++|+++++
T Consensus 156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-----~~~~~~~~~~-~~p~~r~~~pedva~~~ 229 (260)
T PRK06997 156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-----FGKILDFVES-NAPLRRNVTIEEVGNVA 229 (260)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-----hhhHHHHHHh-cCcccccCCHHHHHHHH
Confidence 56799999999877753 47888899999876532211100 0000000000 00112367889999999
Q ss_pred HHHhcCC-c-cCCceEEE
Q 021596 201 IKAVDDP-R-TLNKNLYI 216 (310)
Q Consensus 201 ~~~l~~~-~-~~~~~~~~ 216 (310)
..++.++ . ..|+.+.+
T Consensus 230 ~~l~s~~~~~itG~~i~v 247 (260)
T PRK06997 230 AFLLSDLASGVTGEITHV 247 (260)
T ss_pred HHHhCccccCcceeEEEE
Confidence 9998753 2 23454444
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-11 Score=102.53 Aligned_cols=196 Identities=12% Similarity=0.091 Sum_probs=116.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-----Cch-hhHhHhhhcC--CcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-----PSK-SQLLDHFKNL--GVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~-~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++++||||++.||.++++.|++.|++|+++.|+..... +++ ....+.+... .+.++.+|+.|+++++++++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 87 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE 87 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 379999999999999999999999999999999843210 111 1222333332 36788999999999887765
Q ss_pred -------CCCEEEEcc-cch------h-----------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccc
Q 021596 76 -------QVDVVISTV-GHA------L-----------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDR 119 (310)
Q Consensus 76 -------~~d~Vi~~a-~~~------~-----------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~ 119 (310)
++|++||++ +.. . +.+. +.++..+++.+ -.++|. |+.......
T Consensus 88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~~ 166 (305)
T PRK08303 88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYNA 166 (305)
T ss_pred HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccccC
Confidence 589999999 621 1 1112 23333333333 246655 442211110
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeec
Q 021596 120 AHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 120 ~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
...+....|+.+|..+..+.+. .|+++..|.||++................. .... ..+. ..-+..
T Consensus 167 ---~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~--~~p~-~~~~~~ 239 (305)
T PRK08303 167 ---THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWR-DALA--KEPH-FAISET 239 (305)
T ss_pred ---cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchh-hhhc--cccc-cccCCC
Confidence 1112245799999998877653 478888999998865532111000000000 0000 0000 012346
Q ss_pred cchHHHHHHHHhcCC
Q 021596 193 EDDIATYTIKAVDDP 207 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~ 207 (310)
++|+|.+++.++.++
T Consensus 240 peevA~~v~fL~s~~ 254 (305)
T PRK08303 240 PRYVGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHHHHcCc
Confidence 899999999998765
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-10 Score=95.07 Aligned_cols=177 Identities=15% Similarity=0.167 Sum_probs=125.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC-CcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL-GVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~-~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.+.||||||++.+|+.++.+++++|.++.+.+.+.... .+..+..+.. .+....+|++|.+++.+..+
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~----~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN----EETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch----HHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999998999886543 2333444432 48889999999998877655
Q ss_pred CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc--CCCCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP--SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~--s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+++++||... ...+++++-.+.+.. -.|+|. |+.|.. ..+....
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~-------g~~gl~~ 185 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLF-------GPAGLAD 185 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhccc-------CCccchh
Confidence 6899999999865 344566677777765 567776 555542 2234678
Q ss_pred hHHHHHHHHHHHHH----------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 131 YYDVKARIRRAVEA----------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 131 y~~~K~~~e~~l~~----------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
|..||.++..+.+. .+++++.+.|+.+...++.. .. +. ....+.+.++.+|+-+
T Consensus 186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~--~~--------~~------~~l~P~L~p~~va~~I 249 (300)
T KOG1201|consen 186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG--AT--------PF------PTLAPLLEPEYVAKRI 249 (300)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC--CC--------CC------ccccCCCCHHHHHHHH
Confidence 99999998665542 35788888887776443332 00 00 1224678888999999
Q ss_pred HHHhcCCc
Q 021596 201 IKAVDDPR 208 (310)
Q Consensus 201 ~~~l~~~~ 208 (310)
.+.+...+
T Consensus 250 v~ai~~n~ 257 (300)
T KOG1201|consen 250 VEAILTNQ 257 (300)
T ss_pred HHHHHcCC
Confidence 99887553
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-12 Score=101.50 Aligned_cols=199 Identities=18% Similarity=0.207 Sum_probs=137.1
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVG 85 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~ 85 (310)
..++.|++||.|+++++...+.++.|-.+.|+..+. .++.. ...+.++++|....+-+...+.++..++.+++
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~------~l~sw-~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g 126 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ------TLSSW-PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG 126 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc------hhhCC-CcccchhhccccccCcchhhhcCCcccHHHhc
Confidence 578999999999999999999999999999995432 11111 23477888888776666777889999999998
Q ss_pred chh---------hhhHHHHHHHHHHcCCccEEcc-CC--CCCCccccCCCCCCcchhhHHHHHHHHHHHH-HcCCCEEEE
Q 021596 86 HAL---------LADQVKIIAAIKEAGNVTRFFP-SE--FGNDVDRAHGAVEPAKSVYYDVKARIRRAVE-AEGIPYTYV 152 (310)
Q Consensus 86 ~~~---------~~~~~~~~~aa~~~~~v~~~v~-s~--~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~-~~~~~~~i~ 152 (310)
... .....+.+++|.+.| +++|++ |. ||.+ +..| .-|-.+|+++|..+. .++.+-+++
T Consensus 127 gfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~------~~i~--rGY~~gKR~AE~Ell~~~~~rgiil 197 (283)
T KOG4288|consen 127 GFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLP------PLIP--RGYIEGKREAEAELLKKFRFRGIIL 197 (283)
T ss_pred CccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCC------Cccc--hhhhccchHHHHHHHHhcCCCceee
Confidence 765 344567889999999 999999 43 4432 2222 345599999997775 478999999
Q ss_pred ecceeccccccccCCCCC----------CC-C--CCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCC
Q 021596 153 ESYCFDGYFLPNLLQPGA----------AA-P--PRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 153 rp~~~~~~~~~~~~~~~~----------~~-~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
|||++++.---......+ .. . ....+++. +....+.+.++++|.+++.++++|...
T Consensus 198 RPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~--------- 266 (283)
T KOG4288|consen 198 RPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFK--------- 266 (283)
T ss_pred ccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcC---------
Confidence 999999851000000000 00 0 11123333 345568899999999999999988643
Q ss_pred CCccCHHHHHHHH
Q 021596 220 GNIYSFNDLVSLW 232 (310)
Q Consensus 220 ~~~~s~~e~~~~~ 232 (310)
+ .+++.|+.+.-
T Consensus 267 G-vv~i~eI~~~a 278 (283)
T KOG4288|consen 267 G-VVTIEEIKKAA 278 (283)
T ss_pred c-eeeHHHHHHHH
Confidence 2 45556655543
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.8e-11 Score=95.40 Aligned_cols=144 Identities=20% Similarity=0.293 Sum_probs=98.0
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhc-------
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~------- 75 (310)
+++||||+|.+|..++++|.+++. +|+++.|+.... +.....++.++..+ +.++.+|++|++++.++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 689999999999999999999984 789999984322 34455667776655 6778899999999999986
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
.++.|||+++... +.+..++.++..... +..||. ||.... -..+....|+.+.
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~------~G~~gq~~YaaAN 153 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSL------LGGPGQSAYAAAN 153 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHH------TT-TTBHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHh------ccCcchHhHHHHH
Confidence 3578999998753 566678888887766 888776 542211 0112467887777
Q ss_pred HHHHHHHH---HcCCCEEEEeccee
Q 021596 136 ARIRRAVE---AEGIPYTYVESYCF 157 (310)
Q Consensus 136 ~~~e~~l~---~~~~~~~i~rp~~~ 157 (310)
...+.+.+ ..+.+++.+..+.+
T Consensus 154 ~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 154 AFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHHHHHHHhCCCCEEEEEcccc
Confidence 77776654 46788888875543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.1e-11 Score=93.98 Aligned_cols=224 Identities=12% Similarity=0.052 Sum_probs=131.6
Q ss_pred eEEEEccCcchhHHHHH-----HHHhCC----CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 6 KILSIGGTGYIGKFIVE-----ASVKAG----HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~-----~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
.-++-+++|+|+..+.. .+-+.+ |.|++++|.+.... . .-.++..+|+-. .
T Consensus 14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r---i-tw~el~~~Gip~----------------s 73 (315)
T KOG3019|consen 14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR---I-TWPELDFPGIPI----------------S 73 (315)
T ss_pred cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc---c-ccchhcCCCCce----------------e
Confidence 45667889999988776 333334 89999999955321 0 001122222211 1
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHcCCcc-EEcc----CCCCCCccc---cCCCCCCcch
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVT-RFFP----SEFGNDVDR---AHGAVEPAKS 129 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~-~~v~----s~~~~~~~~---~~~~~~~~~~ 129 (310)
|+.+++.++... +..+..+.++...+.... .+|. +.|-..... +. ......+
T Consensus 74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~-~~~qgfd 152 (315)
T KOG3019|consen 74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEK-IVHQGFD 152 (315)
T ss_pred hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccc-cccCChH
Confidence 233333332211 566788888888765333 2333 222221111 11 1122233
Q ss_pred hhHHHHHHHHHHHHH--cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 130 VYYDVKARIRRAVEA--EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~--~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+.+-..+-|..... ...+.+++|.|.+.|..-..+...... .+-+.---.++|.+.++|||++|++..+..+++++
T Consensus 153 ~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lp-F~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~ 231 (315)
T KOG3019|consen 153 ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILP-FQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENP 231 (315)
T ss_pred HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhh-hhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcC
Confidence 443333344444443 347899999999987532222111100 01111123578899999999999999999999987
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHH
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNI 254 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 254 (310)
. ..+++|-+.|. +.+..|+++.+..+++++. +.++|.......+
T Consensus 232 ~-v~GViNgvAP~-~~~n~Ef~q~lg~aL~Rp~-~~pvP~fvvqA~f 275 (315)
T KOG3019|consen 232 S-VKGVINGVAPN-PVRNGEFCQQLGSALSRPS-WLPVPDFVVQALF 275 (315)
T ss_pred C-CCceecccCCC-ccchHHHHHHHHHHhCCCc-ccCCcHHHHHHHh
Confidence 6 45678887776 8999999999999999974 6667776554443
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.7e-11 Score=93.52 Aligned_cols=131 Identities=21% Similarity=0.315 Sum_probs=92.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
|+++||||+|.||..+++.|+++| ..|+++.|+.+. +...+....+.. ..+.++++|+.+.++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~--~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDS--EGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHH--HHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccc--ccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999996 577788887110 112223344443 446888999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
..|++||++|... ......+.+++...+ -.++|. |+.... ...|....|+.+
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------~~~~~~~~Y~as 151 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGV------RGSPGMSAYSAS 151 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGT------SSSTTBHHHHHH
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhc------cCCCCChhHHHH
Confidence 5899999999765 334455666666644 456665 544332 123456799999
Q ss_pred HHHHHHHHHH
Q 021596 135 KARIRRAVEA 144 (310)
Q Consensus 135 K~~~e~~l~~ 144 (310)
|...+.+.+.
T Consensus 152 kaal~~~~~~ 161 (167)
T PF00106_consen 152 KAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-10 Score=93.66 Aligned_cols=144 Identities=10% Similarity=0.044 Sum_probs=96.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||++.||..+++.|.++|++|.++.|+.+.. .+..+.+.. ..+..+.+|+.|.+++.++++
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l----~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL----KDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH----HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 37999999999999999999999999999999984321 111222222 346678899999999887653
Q ss_pred --CCCEEEEcccchh--------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||++|... ..... .++...++.++-..+|. |+.... +..
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---------~~~ 151 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---------QDL 151 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---------CCc
Confidence 5899999997321 01111 22333333321235555 543211 124
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccc
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGY 160 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~ 160 (310)
..|+.+|...+.+.+. .++++..+.||++..+
T Consensus 152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 5799999998877753 5788899999887665
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-10 Score=95.45 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=112.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.+-|+|||.-...|..++++|.++|+.|.+-....+ .++.+.... .+....++.|++++++++++.+
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~-----gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEE-----GAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCc-----hHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 467999999999999999999999999999986633 222333333 6778999999999999998876
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc--CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP--SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~--s~~~~~~~~~~~~~~~~ 127 (310)
+--.|||+||... +..+++++...+++. .|+|. |..|. -..|.
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR-------~~~p~ 174 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGR-------VALPA 174 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccC-------ccCcc
Confidence 5678999999653 555677777777765 47666 44442 23445
Q ss_pred chhhHHHHHHHHHHHH-------HcCCCEEEEecceecccccc
Q 021596 128 KSVYYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~ 163 (310)
..+|..||..+|.+.. ..|+++.++-||+|-.+...
T Consensus 175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 7889999999987653 47999999999988776543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-10 Score=99.15 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=61.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||++.||.++++.|+++| ++|++++|+.. +. +..+.+.. ..+.++.+|++|.+++.++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~-----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFL-----KAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHH-----HHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 789999999999999999999999 99999999832 22 12223322 346788999999998877664
Q ss_pred --CCCEEEEcccc
Q 021596 76 --QVDVVISTVGH 86 (310)
Q Consensus 76 --~~d~Vi~~a~~ 86 (310)
++|++||+||.
T Consensus 79 ~~~iD~lI~nAG~ 91 (314)
T TIGR01289 79 GRPLDALVCNAAV 91 (314)
T ss_pred CCCCCEEEECCCc
Confidence 58999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.7e-11 Score=102.24 Aligned_cols=102 Identities=24% Similarity=0.280 Sum_probs=85.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|+|+|+ |+||+.+++.|+++| ++|++.+|+ .++...+......+++..+.|..|.+++.+++++.|+||+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs-----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn 74 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRS-----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN 74 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence 689999997 999999999999999 899999999 4555444444445799999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEccCCCCC
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFPSEFGN 115 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~ 115 (310)
+++++ ...++++||.+.| +..+-.|.+..
T Consensus 75 ~~p~~---~~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 75 AAPPF---VDLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred eCCch---hhHHHHHHHHHhC-CCEEEcccCCc
Confidence 99976 4669999999999 65554454433
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.5e-10 Score=87.84 Aligned_cols=143 Identities=16% Similarity=0.202 Sum_probs=97.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
..+||||||+..||..+++.+++.|.+|++..|+ ..+..-... ..+++....+|+.|.++.++..+ .
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~-----e~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRN-----EERLAEAKA-ENPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCc-----HHHHHHHHh-cCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 3689999999999999999999999999999999 333322111 24678889999999998777665 4
Q ss_pred CCEEEEcccchh-------------------------hhhHHHHHHHHHHcCCccEEcc--CCCCCCccccCCCCCCcch
Q 021596 77 VDVVISTVGHAL-------------------------LADQVKIIAAIKEAGNVTRFFP--SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~~~v~~~v~--s~~~~~~~~~~~~~~~~~~ 129 (310)
.++++++||... +..+..++....++. -..+|. |..+... .. ..+
T Consensus 79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvP------m~-~~P 150 (245)
T COG3967 79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVP------MA-STP 150 (245)
T ss_pred hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCc------cc-ccc
Confidence 799999999865 222233444444443 223444 3344332 11 256
Q ss_pred hhHHHHHHHHHH-------HHHcCCCEEEEecceeccc
Q 021596 130 VYYDVKARIRRA-------VEAEGIPYTYVESYCFDGY 160 (310)
Q Consensus 130 ~y~~~K~~~e~~-------l~~~~~~~~i~rp~~~~~~ 160 (310)
.|..+|+.+.-+ ++..++++.-+-|+.+-..
T Consensus 151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 788899887544 3445677777777766553
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.4e-10 Score=95.97 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=107.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++|||||+.||..+++.|.++|.+|+...|+.......+....+......+.++++|+.|.+++.+..+ ..
T Consensus 36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l 115 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL 115 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence 68999999999999999999999999999999953321112222222223457789999999999887654 57
Q ss_pred CEEEEcccchh---------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCc----cccCCCC---CCcc
Q 021596 78 DVVISTVGHAL---------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDV----DRAHGAV---EPAK 128 (310)
Q Consensus 78 d~Vi~~a~~~~---------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~----~~~~~~~---~~~~ 128 (310)
|+.|++||... ...+..+++.++... -.|+|. ||..+.. +..+... ....
T Consensus 116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~ 194 (314)
T KOG1208|consen 116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSD 194 (314)
T ss_pred cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccchhccCccch
Confidence 99999999865 344567788888776 367776 5543311 1111011 1122
Q ss_pred hhhHHHHHHHHHHHHH------cCCCEEEEecceecccccc
Q 021596 129 SVYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~ 163 (310)
..|+.||.....+..+ .|+.+..+.||.+..+.+.
T Consensus 195 ~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~ 235 (314)
T KOG1208|consen 195 AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLS 235 (314)
T ss_pred hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccccee
Confidence 3488999987544432 2677888889998887443
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.6e-10 Score=86.04 Aligned_cols=153 Identities=18% Similarity=0.189 Sum_probs=94.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|+ ++.|+||||+..||--++++|++.. .++.+. .|+++.. .+.-.+....++++++++.|+++.+++.++.+
T Consensus 1 Ms-pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~ 77 (249)
T KOG1611|consen 1 MS-PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVE 77 (249)
T ss_pred CC-CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHH
Confidence 66 5679999999999999999999764 555544 4543221 11111122246789999999999988887764
Q ss_pred ------CCCEEEEcccchh------------------------hhhHH---HHHHHHHHc--C---Ccc--EEcc--CCC
Q 021596 76 ------QVDVVISTVGHAL------------------------LADQV---KIIAAIKEA--G---NVT--RFFP--SEF 113 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~------------------------~~~~~---~~~~aa~~~--~---~v~--~~v~--s~~ 113 (310)
|.++.++++|... +..++ .+++.++.. | ++. .+|+ |..
T Consensus 78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~ 157 (249)
T KOG1611|consen 78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA 157 (249)
T ss_pred hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence 6799999998754 22223 333333322 0 122 2443 333
Q ss_pred CCCccccCCCCCCcchhhHHHHHHHHHHHHHc-------CCCEEEEecceeccc
Q 021596 114 GNDVDRAHGAVEPAKSVYYDVKARIRRAVEAE-------GIPYTYVESYCFDGY 160 (310)
Q Consensus 114 ~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~-------~~~~~i~rp~~~~~~ 160 (310)
+. ..- ........|..||.+.-.+.++. ++-++.+.|||+-..
T Consensus 158 ~s-~~~---~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TD 207 (249)
T KOG1611|consen 158 GS-IGG---FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTD 207 (249)
T ss_pred cc-cCC---CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcC
Confidence 33 111 12224678999999998887753 333455568877553
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=84.27 Aligned_cols=142 Identities=18% Similarity=0.213 Sum_probs=96.2
Q ss_pred CCCCceEEEEccC-cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGT-GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~Gat-G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|+..++|+|||++ |.||.++++.+.++|+.|++..|+.+.- ..| ...++...+.|+.+++++.....
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M--------~~L~~~~gl~~~kLDV~~~~~V~~v~~evr 75 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM--------AQLAIQFGLKPYKLDVSKPEEVVTVSGEVR 75 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH--------hhHHHhhCCeeEEeccCChHHHHHHHHHHh
Confidence 3456899999976 8999999999999999999999995432 222 25689999999999998887654
Q ss_pred -----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc--CCCCCCccccCCCCC
Q 021596 76 -----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP--SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~--s~~~~~~~~~~~~~~ 125 (310)
+.|+.+++||..- +.+..++.++. .+.+ ..+|. |.-+. .+.
T Consensus 76 ~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~-------vpf 146 (289)
T KOG1209|consen 76 ANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGV-------VPF 146 (289)
T ss_pred hCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEE-------ecc
Confidence 4799999998643 22222222222 2221 12333 32221 334
Q ss_pred CcchhhHHHHHHHHHHHHHc-------CCCEEEEecceecc
Q 021596 126 PAKSVYYDVKARIRRAVEAE-------GIPYTYVESYCFDG 159 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~~-------~~~~~i~rp~~~~~ 159 (310)
|+.+.|..+|+++..+.+.. |++++.+-+|.+..
T Consensus 147 pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T 187 (289)
T KOG1209|consen 147 PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT 187 (289)
T ss_pred chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence 56789999999999988753 55555555554443
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.1e-10 Score=87.31 Aligned_cols=96 Identities=20% Similarity=0.247 Sum_probs=74.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-hh-cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FK-NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l~-~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
|+++||||||++|. +++.|.++|++|++++|+. .+...+.. +. ...+.++.+|+.|.+++.++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~-----~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE-----VKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH-----HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57999999998876 9999999999999999973 23222111 21 2357788899999999988776
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHHcCCcc----EEcc
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKEAGNVT----RFFP 110 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~----~~v~ 110 (310)
++|.+|+.+. ..+..++.++|++.| ++ ++++
T Consensus 75 ~id~lv~~vh---~~~~~~~~~~~~~~g-v~~~~~~~~h 109 (177)
T PRK08309 75 PFDLAVAWIH---SSAKDALSVVCRELD-GSSETYRLFH 109 (177)
T ss_pred CCeEEEEecc---ccchhhHHHHHHHHc-cCCCCceEEE
Confidence 4678887666 457899999999999 88 7776
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.7e-09 Score=91.56 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=58.3
Q ss_pred EEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-------C
Q 021596 8 LSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
+||||++.||.++++.|+++| ++|++..|+.. +.. ....+.. ..+.++.+|+.|.+++.++++ +
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFL-----KAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHH-----HHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 599999999999999999999 99999999732 221 2233322 246788999999999887764 4
Q ss_pred CCEEEEcccc
Q 021596 77 VDVVISTVGH 86 (310)
Q Consensus 77 ~d~Vi~~a~~ 86 (310)
+|++||+||.
T Consensus 76 iD~lInnAG~ 85 (308)
T PLN00015 76 LDVLVCNAAV 85 (308)
T ss_pred CCEEEECCCc
Confidence 8999999986
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.8e-10 Score=87.28 Aligned_cols=200 Identities=19% Similarity=0.220 Sum_probs=130.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.+++++|||.|.||..+.++|+++|..+.++..+.+ +.+...+|+ ...+.++++|+++..+++++|+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-----n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-----NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-----CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 478999999999999999999999988777776633 333333443 2457889999999999998887
Q ss_pred ---CCCEEEEcccchh---------------hhhHHHHHHHHHHcC--CccEEcc--CCCCCCccccCCCCCCcchhhHH
Q 021596 76 ---QVDVVISTVGHAL---------------LADQVKIIAAIKEAG--NVTRFFP--SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~--~v~~~v~--s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
..|++|+.||... +.++...++...+.. .-.-+|. |.+|-. +.|-.+.|+.
T Consensus 80 ~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~-------P~p~~pVY~A 152 (261)
T KOG4169|consen 80 TFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD-------PMPVFPVYAA 152 (261)
T ss_pred HhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC-------ccccchhhhh
Confidence 4899999999865 666677777776542 1123443 556653 2344678999
Q ss_pred HHHHH---------HHHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 134 VKARI---------RRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 134 ~K~~~---------e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+|+.+ +.+.++.|+++..+.||+........+-....+ ++... .+... -...+--+..+++..++.++
T Consensus 153 sKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~-~e~~~-~~~~~-l~~~~~q~~~~~a~~~v~ai 229 (261)
T KOG4169|consen 153 SKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGY-LEYSD-SIKEA-LERAPKQSPACCAINIVNAI 229 (261)
T ss_pred cccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCc-ccccH-HHHHH-HHHcccCCHHHHHHHHHHHH
Confidence 99864 455567899999999998776544333110000 00000 00000 00112345678899999999
Q ss_pred cCCccCCceEEEcCCC
Q 021596 205 DDPRTLNKNLYIQPPG 220 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (310)
+.+. ++.+++++.+
T Consensus 230 E~~~--NGaiw~v~~g 243 (261)
T KOG4169|consen 230 EYPK--NGAIWKVDSG 243 (261)
T ss_pred hhcc--CCcEEEEecC
Confidence 8864 4444544333
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.9e-10 Score=90.67 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=79.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|+|+||||. |+.+++.|.+.|++|++.+|+.... ..+...+...+..+..|.+++.+.++ ++|+||+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~--------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID 71 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK--------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD 71 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc--------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence 68999999999 9999999999999999999985432 22223344556666778888988887 6999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++.++....+.++.++|++.| ++.+-+
T Consensus 72 AtHPfA~~is~~a~~a~~~~~-ipylR~ 98 (256)
T TIGR00715 72 ATHPFAAQITTNATAVCKELG-IPYVRF 98 (256)
T ss_pred cCCHHHHHHHHHHHHHHHHhC-CcEEEE
Confidence 999998889999999999999 877766
|
This enzyme was found to be a monomer by gel filtration. |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.5e-09 Score=85.79 Aligned_cols=147 Identities=22% Similarity=0.238 Sum_probs=97.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCC-HHHHHHHhc--
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLN-HESLVNAIK-- 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d-~~~~~~~~~-- 75 (310)
.+++|+||||++.||..+++.|.++|+.|+++.|+.... ..+.+..... ..+.....|+++ .++++.+++
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE---AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh---hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999998884321 1222222222 356777899998 887776665
Q ss_pred -----CCCEEEEcccch----h----------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc-c
Q 021596 76 -----QVDVVISTVGHA----L----------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA-K 128 (310)
Q Consensus 76 -----~~d~Vi~~a~~~----~----------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~-~ 128 (310)
++|+++++|+.. . ..+...+.+++...-.-+++|. |+.... .. +. .
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~------~~~~ 153 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG------PPGQ 153 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC------CCCc
Confidence 489999999963 2 2233334443332210116665 554432 11 11 3
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceecc
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDG 159 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~ 159 (310)
..|+.+|.....+.+. .|+.+..+.||.+..
T Consensus 154 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t 191 (251)
T COG1028 154 AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT 191 (251)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCC
Confidence 6899999998766542 578888999985443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.2e-09 Score=79.91 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=112.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC-CcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL-GVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~-~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.+..+||||+..||+++++.|.+.|++|.+.+++.... ......+... +-..+.+|+.+.+++...++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A----~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA----EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH----HHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 37889999999999999999999999999999985422 2233444332 45678899999988777655
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cC-CccEEcc-C-CCCCCccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AG-NVTRFFP-S-EFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~-~v~~~v~-s-~~~~~~~~~~~~~~~~~~ 129 (310)
.++++++|||.+. ..+....-+++.+ .+ +--.+|. | ..|.-.+ -...
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN-------~GQt 162 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN-------FGQT 162 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc-------ccch
Confidence 5899999999876 2222233333322 22 0125655 3 3333211 1245
Q ss_pred hhHHHHHH--------HHHHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKAR--------IRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~--------~e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|.- +.+ +...++++..+-||++..+....+.+... .......+ ...+-..+|+|..++
T Consensus 163 nYAAsK~GvIgftktaArE-la~knIrvN~VlPGFI~tpMT~~mp~~v~----~ki~~~iP----mgr~G~~EevA~~V~ 233 (256)
T KOG1200|consen 163 NYAASKGGVIGFTKTAARE-LARKNIRVNVVLPGFIATPMTEAMPPKVL----DKILGMIP----MGRLGEAEEVANLVL 233 (256)
T ss_pred hhhhhcCceeeeeHHHHHH-HhhcCceEeEeccccccChhhhhcCHHHH----HHHHccCC----ccccCCHHHHHHHHH
Confidence 66665553 333 33457888888898887654333222110 11111111 123455689999988
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
.++.+.
T Consensus 234 fLAS~~ 239 (256)
T KOG1200|consen 234 FLASDA 239 (256)
T ss_pred HHhccc
Confidence 888543
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-10 Score=94.02 Aligned_cols=187 Identities=17% Similarity=0.245 Sum_probs=116.2
Q ss_pred ccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCch-hhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--------CCC
Q 021596 11 GGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSK-SQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--------QVD 78 (310)
Q Consensus 11 Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--------~~d 78 (310)
|++ +.||..+++.|+++|++|+++.|+. ++ ...++.+ ...+.+++.+|+.|.+++.++++ ++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNE-----EKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSH-----HHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence 566 9999999999999999999999993 33 1222333 33457789999999998888754 589
Q ss_pred EEEEcccchh---------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 79 VVISTVGHAL---------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 79 ~Vi~~a~~~~---------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
+++|+++... ....+.++..+++.+ .+|+ |+.+... + .|....
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---sii~iss~~~~~-----~-~~~~~~ 146 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGG---SIINISSIAAQR-----P-MPGYSA 146 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEE---EEEEEEEGGGTS-----B-STTTHH
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---Ccccccchhhcc-----c-Cccchh
Confidence 9999886432 122233333333433 4444 3332211 1 233568
Q ss_pred hHHHHHHHHHHHHH--------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVEA--------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~~--------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|+.+|...+.+.+. .|+++..|.||++........... ...............+..++|+|.++..
T Consensus 147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~------~~~~~~~~~~~pl~r~~~~~evA~~v~f 220 (241)
T PF13561_consen 147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN------EEFLEELKKRIPLGRLGTPEEVANAVLF 220 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH------HHHHHHHHHHSTTSSHBEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc------cchhhhhhhhhccCCCcCHHHHHHHHHH
Confidence 99999999887752 589999999999886542221100 0000000000001135688999999999
Q ss_pred HhcCC--ccCCceEEEc
Q 021596 203 AVDDP--RTLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~--~~~~~~~~~~ 217 (310)
++.+. .--|+++.+-
T Consensus 221 L~s~~a~~itG~~i~vD 237 (241)
T PF13561_consen 221 LASDAASYITGQVIPVD 237 (241)
T ss_dssp HHSGGGTTGTSEEEEES
T ss_pred HhCccccCccCCeEEEC
Confidence 99754 2245655553
|
... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-08 Score=84.60 Aligned_cols=202 Identities=15% Similarity=0.116 Sum_probs=122.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.+.++||||+..||++++..|.+.|.+|++..|+.+.. ......+. ...+..+.+|+.+.++.+++++
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERL----EETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999994321 01112221 2347889999998877666543
Q ss_pred -----CCCEEEEcccchh--------------------hh-hHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCC
Q 021596 76 -----QVDVVISTVGHAL--------------------LA-DQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~--------------------~~-~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
+.|+++++++... .. ....+..++... + -..+++ |+.+... +.
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~-----~~ 157 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVG-----PG 157 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEecccccc-----CC
Confidence 5999999998654 22 233344444322 2 345555 3332221 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC-CCCCCCCeEEEecCCCceeEeeccchH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
.+....|+.+|..++++.+. .|+++..+-||.+...+........ ...... ............+..++|+
T Consensus 158 ~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~p~gr~g~~~ev 235 (270)
T KOG0725|consen 158 PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKE--ATDSKGAVPLGRVGTPEEV 235 (270)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhh--hhccccccccCCccCHHHH
Confidence 11116899999999998874 5899999999988776511010000 000000 0000001112356778999
Q ss_pred HHHHHHHhcCCc--cCCceEEEc
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
+..+..++.+.. ..|+.+.+.
T Consensus 236 a~~~~fla~~~asyitG~~i~vd 258 (270)
T KOG0725|consen 236 AEAAAFLASDDASYITGQTIIVD 258 (270)
T ss_pred HHhHHhhcCcccccccCCEEEEe
Confidence 999888886532 234444443
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.2e-09 Score=87.74 Aligned_cols=197 Identities=10% Similarity=0.019 Sum_probs=107.7
Q ss_pred CceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCc-------hhhHhHhhhcC----CcEEEEccC--CCHH
Q 021596 4 KSKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPS-------KSQLLDHFKNL----GVNFVVGDV--LNHE 68 (310)
Q Consensus 4 ~~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~l~~~----~~~~v~~D~--~d~~ 68 (310)
.++++|||| +..||.++++.|.+.|.+|++ .|+....+.. +....+.+... ....+.+|+ .+++
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 87 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPE 87 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccc
Confidence 478999999 799999999999999999988 5552211000 00000001111 135677888 3222
Q ss_pred ------------------HHHHHhc-------CCCEEEEcccch----h-----------------hhh----HHHHHHH
Q 021596 69 ------------------SLVNAIK-------QVDVVISTVGHA----L-----------------LAD----QVKIIAA 98 (310)
Q Consensus 69 ------------------~~~~~~~-------~~d~Vi~~a~~~----~-----------------~~~----~~~~~~a 98 (310)
++.++++ ++|++||+||.. . +.+ ++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~ 167 (303)
T PLN02730 88 DVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI 167 (303)
T ss_pred cCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 5555544 589999999531 1 222 2333333
Q ss_pred HHHcCCccEEcc-CCCCCCccccCCCCCCcc-hhhHHHHHHHHHHHHH--------cCCCEEEEecceeccccccccCCC
Q 021596 99 IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK-SVYYDVKARIRRAVEA--------EGIPYTYVESYCFDGYFLPNLLQP 168 (310)
Q Consensus 99 a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~-~~y~~~K~~~e~~l~~--------~~~~~~i~rp~~~~~~~~~~~~~~ 168 (310)
+++.| ++|+ |+..... + .|.. ..|+.+|...+.+.+. .++++..|.||.+...+...+..
T Consensus 168 m~~~G---~II~isS~a~~~-----~-~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~- 237 (303)
T PLN02730 168 MNPGG---ASISLTYIASER-----I-IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGF- 237 (303)
T ss_pred HhcCC---EEEEEechhhcC-----C-CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccc-
Confidence 43333 5555 3322211 1 1222 4699999999887753 35777888888776654322100
Q ss_pred CCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEE
Q 021596 169 GAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYI 216 (310)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~ 216 (310)
. ...............+..++|++.+++.++.... ..|+.+.+
T Consensus 238 ----~-~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~v 282 (303)
T PLN02730 238 ----I-DDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYV 282 (303)
T ss_pred ----c-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEE
Confidence 0 0000000000000235678999999999986432 23454544
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.9e-08 Score=82.85 Aligned_cols=182 Identities=18% Similarity=0.179 Sum_probs=111.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.+|+||||+..+|..++..+..+|++|+++.|+.++. .++.+.++. ..+.+..+|+.|.++....++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl----~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~ 109 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKL----LEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL 109 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH----HHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence 4899999999999999999999999999999995442 122222321 236688899999998888776
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
.+|.+|+|||..- ..++.+++.++. +..+..+++. |+-.... .-...+
T Consensus 110 ~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~------~i~Gys 183 (331)
T KOG1210|consen 110 EGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML------GIYGYS 183 (331)
T ss_pred cCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc------Cccccc
Confidence 4799999999754 444555555443 3322235554 3311110 112356
Q ss_pred hhHHHHHHHHHHHH-------HcCCCEEEEecceecccccc--ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 130 VYYDVKARIRRAVE-------AEGIPYTYVESYCFDGYFLP--NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 130 ~y~~~K~~~e~~l~-------~~~~~~~i~rp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.|+.+|.+...+.. ++++.++..-|+.+...... +... + .. ..+...+ -+.+..+++|.++
T Consensus 184 aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tk-----P-~~-t~ii~g~---ss~~~~e~~a~~~ 253 (331)
T KOG1210|consen 184 AYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTK-----P-EE-TKIIEGG---SSVIKCEEMAKAI 253 (331)
T ss_pred ccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccC-----c-hh-eeeecCC---CCCcCHHHHHHHH
Confidence 67777777654443 35777777766655443221 1111 0 10 1122112 2558889999988
Q ss_pred HHHhcC
Q 021596 201 IKAVDD 206 (310)
Q Consensus 201 ~~~l~~ 206 (310)
+.=+..
T Consensus 254 ~~~~~r 259 (331)
T KOG1210|consen 254 VKGMKR 259 (331)
T ss_pred HhHHhh
Confidence 876654
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.9e-09 Score=91.24 Aligned_cols=93 Identities=31% Similarity=0.383 Sum_probs=71.9
Q ss_pred EEEEccCcchhHHHHHHHHhCC-C-CEEEEEcCCCCCCCchhhHhH-hhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAG-H-PTFVLVRESTLSAPSKSQLLD-HFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g-~-~V~~~~R~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|+|+|| |++|+.+++.|.+++ + +|++.+|+ ..+.+.+. .+...+++.++.|+.|.+++.++++++|+||+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRN-----PEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESS-----HHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECC-----HHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence 799999 999999999999987 4 89999999 44442222 224568999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++. ....++++|.+.| + ++|-
T Consensus 75 ~gp~---~~~~v~~~~i~~g-~-~yvD 96 (386)
T PF03435_consen 75 AGPF---FGEPVARACIEAG-V-HYVD 96 (386)
T ss_dssp SSGG---GHHHHHHHHHHHT---EEEE
T ss_pred Cccc---hhHHHHHHHHHhC-C-Ceec
Confidence 9976 5778999999998 4 5554
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.2e-08 Score=81.97 Aligned_cols=34 Identities=21% Similarity=0.010 Sum_probs=30.2
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++++||||+ ..||.++++.|.++|.+|++.+|.
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 4789999995 899999999999999999987653
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-07 Score=98.95 Aligned_cols=150 Identities=17% Similarity=0.140 Sum_probs=104.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCC-----------------------------C----------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSA-----------------------------P---------- 43 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~-----------------------------~---------- 43 (310)
.+.++||||++.||..+++.|.++ |.+|+++.|+..... |
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 468999999999999999999998 589999999821000 0
Q ss_pred ----chhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------CCCEEEEcccchh-------------------hhhH
Q 021596 44 ----SKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------QVDVVISTVGHAL-------------------LADQ 92 (310)
Q Consensus 44 ----~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------~~d~Vi~~a~~~~-------------------~~~~ 92 (310)
+....+..+.. ..+.++.+|++|.+++.++++ ++|.|||+||... +.+.
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 00011122222 247789999999999888776 4899999999743 6677
Q ss_pred HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEecceeccc
Q 021596 93 VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-----EGIPYTYVESYCFDGY 160 (310)
Q Consensus 93 ~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~ 160 (310)
.++++++.... .+++|. ||..... ..+....|+.+|.....+.+. .++++..+.||.+.+.
T Consensus 2157 ~~Ll~al~~~~-~~~IV~~SSvag~~------G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2157 LSLLAALNAEN-IKLLALFSSAAGFY------GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHHHHhC-CCeEEEEechhhcC------CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 88888887765 667765 5533221 122457899999887665542 2567788888877654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.3e-08 Score=80.56 Aligned_cols=168 Identities=12% Similarity=0.002 Sum_probs=104.1
Q ss_pred HHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CCCEEEEcccchh-------
Q 021596 20 IVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QVDVVISTVGHAL------- 88 (310)
Q Consensus 20 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~d~Vi~~a~~~~------- 88 (310)
+++.|+++|++|++++|+.. +.. ..+++++|+.|.+++.++++ ++|++||+||...
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~-----~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~ 67 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREP-----GMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV 67 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcc-----hhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence 47889999999999999843 211 13467899999999998887 5899999998642
Q ss_pred ----hhhHHHHHHHHHHc--CCccEEcc-CC---CCCCccc------------cC------CCCCCcchhhHHHHHHHHH
Q 021596 89 ----LADQVKIIAAIKEA--GNVTRFFP-SE---FGNDVDR------------AH------GAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 89 ----~~~~~~~~~aa~~~--~~v~~~v~-s~---~~~~~~~------------~~------~~~~~~~~~y~~~K~~~e~ 140 (310)
..++..+++++... . -.++|+ |+ ++.+... .. ....+....|+.+|...+.
T Consensus 68 ~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~ 146 (241)
T PRK12428 68 ARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL 146 (241)
T ss_pred hhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence 55566677776653 2 246766 33 2211000 00 0122345789999999876
Q ss_pred HHH--------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 141 AVE--------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 141 ~l~--------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
+.+ ..|+++..++||.+.+.+....... .......... .....+..++|+|++++.++..+
T Consensus 147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~--~~~~~~~~pe~va~~~~~l~s~~ 215 (241)
T PRK12428 147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM----LGQERVDSDA--KRMGRPATADEQAAVLVFLCSDA 215 (241)
T ss_pred HHHHHHHHhhhccCeEEEEeecCCccCcccccchhh----hhhHhhhhcc--cccCCCCCHHHHHHHHHHHcChh
Confidence 553 2478899999998877654322110 0000000000 01123567899999999988643
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.4e-08 Score=79.16 Aligned_cols=144 Identities=20% Similarity=0.233 Sum_probs=91.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-hhh---cCCcEEEEccCCCHHH----HHHHhcC-
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFK---NLGVNFVVGDVLNHES----LVNAIKQ- 76 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~l~---~~~~~~v~~D~~d~~~----~~~~~~~- 76 (310)
=.+|||||..||+..+++|.++|++|+.++|+ .+|.+.+. ++. .-.+.++..|+++.+. +.+.+.+
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt-----~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRGFNVVLISRT-----QEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 36899999999999999999999999999999 44554332 221 1336788899987664 5555554
Q ss_pred -CCEEEEcccchh-------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 77 -VDVVISTVGHAL-------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 -~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
+-++++++|... ...+.-++--+.+.+ -..++. ++++.. -+.|..+
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~------~p~p~~s 198 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGL------IPTPLLS 198 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEecccccc------ccChhHH
Confidence 567899998754 111222222233322 223333 333322 2234568
Q ss_pred hhHHHHHHHHHHH-------HHcCCCEEEEecceecccc
Q 021596 130 VYYDVKARIRRAV-------EAEGIPYTYVESYCFDGYF 161 (310)
Q Consensus 130 ~y~~~K~~~e~~l-------~~~~~~~~i~rp~~~~~~~ 161 (310)
.|+.+|...+.+- +..|+.+-.+-|.++....
T Consensus 199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 8999999654432 2357777777787776653
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-07 Score=73.70 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=61.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.+.++||||+|.||..+++.|.++|++|.++.|+.+. .....+.+.. ....++.+|+.|.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES----GQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999987321 1112233322 235678999999988877553
Q ss_pred -CCCEEEEcccch
Q 021596 76 -QVDVVISTVGHA 87 (310)
Q Consensus 76 -~~d~Vi~~a~~~ 87 (310)
++|+++|++|..
T Consensus 92 G~iDilVnnAG~~ 104 (169)
T PRK06720 92 SRIDMLFQNAGLY 104 (169)
T ss_pred CCCCEEEECCCcC
Confidence 689999999864
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.5e-08 Score=73.01 Aligned_cols=185 Identities=19% Similarity=0.215 Sum_probs=113.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
...|++||+.-.||+.+++.|.+.|.+|+++.|+ +.....+-...+.-++.+.+|+.+.+.+.+++. ..|..
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~-----~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN-----EANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecC-----HHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 3689999998899999999999999999999999 434333222223348999999999999888887 47999
Q ss_pred EEcccchh-------------------hhhHHHHHHHHHHcCCccE-----Ecc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAIKEAGNVTR-----FFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~-----~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+++||... +.+..++.+...+.= +.| +|. |+..... +.. .++.|..+|
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~l-v~R~~~GaIVNvSSqas~R-----~~~-nHtvYcatK 154 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNL-VDRQIKGAIVNVSSQASIR-----PLD-NHTVYCATK 154 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhh-hhccCCceEEEecchhccc-----ccC-CceEEeecH
Confidence 99988653 111111222211110 112 222 3332221 222 378898999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccc-cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFL-PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+.+.+.+- ..+++..+.|..++...- .++..+ ...+.. .. .-....|.-++.++.++..++.+.
T Consensus 155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP-----~K~k~m-L~-riPl~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDP-----DKKKKM-LD-RIPLKRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCc-----hhccch-hh-hCchhhhhHHHHHHhhheeeeecC
Confidence 988766542 246677777888876432 222222 111101 10 011124667788888888887654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.5e-08 Score=81.44 Aligned_cols=150 Identities=14% Similarity=0.103 Sum_probs=94.1
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+|++|+|+|++|.+|+.++..|..++ .+++.+++.... . .. ..+.+........+.+|+.++.++++++|+|
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~--g-~a---~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvV 80 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP--G-VA---ADLSHIDTPAKVTGYADGELWEKALRGADLV 80 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc--c-cc---cchhhcCcCceEEEecCCCchHHHhCCCCEE
Confidence 47899999999999999999998666 579999884211 1 11 1222222233445666655556788999999
Q ss_pred EEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCcc--------ccCCCCCCcchhhHHHHHHH
Q 021596 81 ISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVD--------RAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 81 i~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~--------~~~~~~~~~~~~y~~~K~~~ 138 (310)
++++|... .....++++++++++ ++++|. ++.+...- ... ...|+...||.+-...
T Consensus 81 VitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~-sg~p~~~viG~g~LDs 158 (321)
T PTZ00325 81 LICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKA-GVYDPRKLFGVTTLDV 158 (321)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhc-cCCChhheeechhHHH
Confidence 99999743 446788999999998 888876 44322110 011 2223355666543222
Q ss_pred ---HHHH-HHcCCCEEEEecceeccc
Q 021596 139 ---RRAV-EAEGIPYTYVESYCFDGY 160 (310)
Q Consensus 139 ---e~~l-~~~~~~~~i~rp~~~~~~ 160 (310)
..++ +..+++...++.-++++.
T Consensus 159 ~R~r~~la~~l~v~~~~V~~~VlGeH 184 (321)
T PTZ00325 159 VRARKFVAEALGMNPYDVNVPVVGGH 184 (321)
T ss_pred HHHHHHHHHHhCcChhheEEEEEeec
Confidence 2222 345777777775445443
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.3e-08 Score=81.58 Aligned_cols=149 Identities=16% Similarity=0.128 Sum_probs=95.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
..||+|+|++|.+|+.++..|..++ .++++++++... ... ..+.+........++.+.+++.++++++|+|+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a----~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVV 91 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVA----ADVSHINTPAQVRGFLGDDQLGDALKGADLVI 91 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeE----chhhhCCcCceEEEEeCCCCHHHHcCCCCEEE
Confidence 4699999999999999999999777 479999987511 111 12223222323345444555778899999999
Q ss_pred Ecccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCCC-----ccc---cCCCCCCcchhhHHHHHHHH
Q 021596 82 STVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGND-----VDR---AHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 82 ~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~-----~~~---~~~~~~~~~~~y~~~K~~~e 139 (310)
+++|... ....+++.+++++.+ ...++. ++-... ... .. ...|+...||.++...+
T Consensus 92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~-s~~p~~~viG~~~LDs~ 169 (323)
T PLN00106 92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKA-GVYDPKKLFGVTTLDVV 169 (323)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHc-CCCCcceEEEEecchHH
Confidence 9999743 556788999999988 777665 332221 110 11 22333566766665554
Q ss_pred HH----HHHcCCCEEEEecceeccc
Q 021596 140 RA----VEAEGIPYTYVESYCFDGY 160 (310)
Q Consensus 140 ~~----l~~~~~~~~i~rp~~~~~~ 160 (310)
++ .+..+++..-+..-+++++
T Consensus 170 Rl~~~lA~~lgv~~~~V~~~ViGeH 194 (323)
T PLN00106 170 RANTFVAEKKGLDPADVDVPVVGGH 194 (323)
T ss_pred HHHHHHHHHhCCChhheEEEEEEeC
Confidence 33 2346777777776666665
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-07 Score=79.63 Aligned_cols=93 Identities=28% Similarity=0.399 Sum_probs=73.5
Q ss_pred ceEEEEccCcchhHHHHHHHHh----CCCCEEEEEcCCCCCCCchhh-HhHhhhc------CCcEEEEccCCCHHHHHHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVK----AGHPTFVLVRESTLSAPSKSQ-LLDHFKN------LGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~~~-~~~~l~~------~~~~~v~~D~~d~~~~~~~ 73 (310)
--++|.|||||.|..+++.+++ .|..+-+..|+. .|.. .++.... +...++.+|..|++++.+.
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~-----~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em 80 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE-----KKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEM 80 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCH-----HHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHH
Confidence 3589999999999999999999 677888889994 3432 2222221 1234788999999999999
Q ss_pred hcCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 74 IKQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 74 ~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+.+.+|+||+|+.. .....+++||.+.|
T Consensus 81 ak~~~vivN~vGPyR-~hGE~VVkacienG 109 (423)
T KOG2733|consen 81 AKQARVIVNCVGPYR-FHGEPVVKACIENG 109 (423)
T ss_pred HhhhEEEEeccccce-ecCcHHHHHHHHcC
Confidence 999999999999984 56677888888877
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.2e-07 Score=73.20 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=62.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhhh-cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFK-NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++++|+||+|.+|+.+++.|.+.|++|+++.|+ .++...+ +.+. ..+.++...|..+.+++.++++++|+||
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRD-----LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 4799999999999999999999999999999998 3333222 2222 2356677788899999999999999999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
++++..
T Consensus 103 ~at~~g 108 (194)
T cd01078 103 AAGAAG 108 (194)
T ss_pred ECCCCC
Confidence 987754
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.5e-07 Score=77.95 Aligned_cols=91 Identities=21% Similarity=0.230 Sum_probs=59.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEE--EEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~--~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|++|++|+|+||||++|+.+++.|.+++|++.. ..++.++. . +.+...+ ...++.+.+... ++++|
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~a-G------~~l~~~~---~~l~~~~~~~~~--~~~vD 68 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESA-G------HSVPFAG---KNLRVREVDSFD--FSQVQ 68 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccC-C------CeeccCC---cceEEeeCChHH--hcCCC
Confidence 888899999999999999999999988775433 22332211 1 1111122 223333333222 57899
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccE
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTR 107 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~ 107 (310)
+||.+++.. ....+++.+.+.| ++.
T Consensus 69 ~vFla~p~~---~s~~~v~~~~~~G-~~V 93 (336)
T PRK05671 69 LAFFAAGAA---VSRSFAEKARAAG-CSV 93 (336)
T ss_pred EEEEcCCHH---HHHHHHHHHHHCC-CeE
Confidence 999999843 4566888888888 543
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-07 Score=74.98 Aligned_cols=79 Identities=23% Similarity=0.277 Sum_probs=56.5
Q ss_pred CceEEEEccC----------------cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGGT----------------GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Gat----------------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++|+||+|. ||+|+++++.|+++|++|+++++..+.. +... ........+.++....
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~-~~~~-----~~~~~~~~V~s~~d~~ 76 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEK-PNDI-----NNQLELHPFEGIIDLQ 76 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCC-Cccc-----CCceeEEEEecHHHHH
Confidence 4799999886 9999999999999999999888653211 1000 0012244566644445
Q ss_pred HHHHHHhc--CCCEEEEcccchh
Q 021596 68 ESLVNAIK--QVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~~~~~--~~d~Vi~~a~~~~ 88 (310)
+.+.+++. ++|+|||+|+...
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHhcccCCCEEEECccccc
Confidence 67888885 6999999999865
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.8e-07 Score=70.11 Aligned_cols=200 Identities=17% Similarity=0.243 Sum_probs=120.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QVD 78 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~d 78 (310)
.-+||||.+.+|...++.|.++|..|..++...++. .. ..+++ ...+.+..+|+++.+++..++. ..|
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg-~~---vakel-g~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-AD---VAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-hH---HHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 569999999999999999999999999998875554 11 22333 4568899999999999998886 479
Q ss_pred EEEEcccchh-------hhhHHHHHHHHHHc------C--CccEEccCCCCCCccccC---------C-----CCCCcch
Q 021596 79 VVISTVGHAL-------LADQVKIIAAIKEA------G--NVTRFFPSEFGNDVDRAH---------G-----AVEPAKS 129 (310)
Q Consensus 79 ~Vi~~a~~~~-------~~~~~~~~~aa~~~------~--~v~~~v~s~~~~~~~~~~---------~-----~~~~~~~ 129 (310)
+.++|+|... -....+-++..++. | +|-|+....+|..+...+ . +-.....
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqa 165 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQA 165 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchh
Confidence 9999999764 01111111111110 0 001111111222111100 0 0011356
Q ss_pred hhHHHHHHHH-------HHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIR-------RAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e-------~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|..+- +.+...|+++.-+-||.|..+++..+.......+ .+.++.+ -..-++.+.+..+..
T Consensus 166 aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fl-a~~ipfp------srlg~p~eyahlvqa 238 (260)
T KOG1199|consen 166 AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFL-AQLIPFP------SRLGHPHEYAHLVQA 238 (260)
T ss_pred hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHH-HHhCCCc------hhcCChHHHHHHHHH
Confidence 7888887753 3333468888888899998876654433210000 0111111 134456778888899
Q ss_pred HhcCCccCCceEEEc
Q 021596 203 AVDDPRTLNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~ 217 (310)
++++|-..|+++.+-
T Consensus 239 iienp~lngevir~d 253 (260)
T KOG1199|consen 239 IIENPYLNGEVIRFD 253 (260)
T ss_pred HHhCcccCCeEEEec
Confidence 999987667777764
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.2e-07 Score=74.81 Aligned_cols=68 Identities=22% Similarity=0.338 Sum_probs=48.8
Q ss_pred cCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC--HHHHHHHhcCCCEEEEcccchh
Q 021596 12 GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN--HESLVNAIKQVDVVISTVGHAL 88 (310)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d--~~~~~~~~~~~d~Vi~~a~~~~ 88 (310)
+||++|.++++.|+++|++|+++.|+.... .....+++++.++-.+ .+.+.+.+.++|+|||+|+...
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 379999999999999999999998863211 0012356666654322 3456667778999999999754
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-06 Score=73.11 Aligned_cols=91 Identities=25% Similarity=0.281 Sum_probs=70.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
..++|.|||||.|..++++|..+|.+-....|+ +.|...+... .+.+.-..++.+++.+++.+.+.++|+||+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs-----~~kl~~l~~~--LG~~~~~~p~~~p~~~~~~~~~~~VVlncv 79 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRS-----SAKLDALRAS--LGPEAAVFPLGVPAALEAMASRTQVVLNCV 79 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCC-----HHHHHHHHHh--cCccccccCCCCHHHHHHHHhcceEEEecc
Confidence 469999999999999999999999988888888 5555444332 344555555666999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHcC
Q 021596 85 GHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~ 103 (310)
|+.. .....++++|..+|
T Consensus 80 GPyt-~~g~plv~aC~~~G 97 (382)
T COG3268 80 GPYT-RYGEPLVAACAAAG 97 (382)
T ss_pred cccc-ccccHHHHHHHHhC
Confidence 9985 44455666666655
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.4e-06 Score=74.80 Aligned_cols=81 Identities=17% Similarity=0.141 Sum_probs=53.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-------CCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-------HPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
+.+|+||||+|++|++++..|+..+ .+|++++|+.... +.+- ...+.+. ......|+....++.++++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~---~~~g~~~Dl~d~-~~~~~~~~~~~~~~~~~l~ 77 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK---ALEGVVMELQDC-AFPLLKSVVATTDPEEAFK 77 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc---cccceeeehhhc-cccccCCceecCCHHHHhC
Confidence 4689999999999999999999855 4899999974311 1100 0001000 0011234444456778889
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|||+||...
T Consensus 78 ~aDiVI~tAG~~~ 90 (325)
T cd01336 78 DVDVAILVGAMPR 90 (325)
T ss_pred CCCEEEEeCCcCC
Confidence 9999999999754
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.4e-06 Score=67.95 Aligned_cols=94 Identities=27% Similarity=0.493 Sum_probs=72.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-hh-cCCcEEEEccCCCHHHHHHH-hcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FK-NLGVNFVVGDVLNHESLVNA-IKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l~-~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi 81 (310)
|+++|.| .|.+|..+++.|.+.||+|+++.++ +++. +. +. ......+.+|-+|++.|+++ +.++|+++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d-----~~~~---~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vv 71 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRD-----EERV---EEFLADELDTHVVIGDATDEDVLEEAGIDDADAVV 71 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcC-----HHHH---HHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEE
Confidence 6899998 6999999999999999999999999 3333 22 22 25789999999999999998 77899999
Q ss_pred EcccchhhhhHHHHHH-HHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIA-AIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~-aa~~~~~v~~~v~ 110 (310)
-+.+... ...-+.. +++..| +++++.
T Consensus 72 a~t~~d~--~N~i~~~la~~~~g-v~~via 98 (225)
T COG0569 72 AATGNDE--VNSVLALLALKEFG-VPRVIA 98 (225)
T ss_pred EeeCCCH--HHHHHHHHHHHhcC-CCcEEE
Confidence 9988653 2222333 334467 888876
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.2e-06 Score=72.41 Aligned_cols=88 Identities=17% Similarity=0.268 Sum_probs=61.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|++|+|+||||++|+.+++.|.+++|+ +++++|..+.. +.+.-.+.++...|+.+. .++++|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g--------~~l~~~g~~i~v~d~~~~-----~~~~vDvV 67 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG--------KELSFKGKELKVEDLTTF-----DFSGVDIA 67 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC--------CeeeeCCceeEEeeCCHH-----HHcCCCEE
Confidence 579999999999999999999998875 47887764322 111122344555566432 24689999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
|.++|.. .+..++..+.+.| + .+|
T Consensus 68 f~A~g~g---~s~~~~~~~~~~G-~-~VI 91 (334)
T PRK14874 68 LFSAGGS---VSKKYAPKAAAAG-A-VVI 91 (334)
T ss_pred EECCChH---HHHHHHHHHHhCC-C-EEE
Confidence 9998854 4666777777777 5 444
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.9e-06 Score=66.16 Aligned_cols=83 Identities=20% Similarity=0.260 Sum_probs=60.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-----CEEEEEcCCCCCCCchhhHhHhhhc---CCcEEEEccCCCHHHHHHHhc-
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-----PTFVLVRESTLSAPSKSQLLDHFKN---LGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-----~V~~~~R~~~~~~~~~~~~~~~l~~---~~~~~v~~D~~d~~~~~~~~~- 75 (310)
+.++|||+++.+|-.++..|++... .+.+.+|+.++. ..-...+....+ ..++++..|+++..++.++.+
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka-e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA-EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH-HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 5689999999999999999998753 366778886553 222222222222 247889999999888776654
Q ss_pred ------CCCEEEEcccchh
Q 021596 76 ------QVDVVISTVGHAL 88 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~ 88 (310)
..|.|+.+||.+.
T Consensus 83 i~~rf~~ld~iylNAg~~~ 101 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMP 101 (341)
T ss_pred HHHHhhhccEEEEccccCC
Confidence 6899999999875
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=1e-05 Score=66.47 Aligned_cols=95 Identities=21% Similarity=0.206 Sum_probs=79.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
|++|+|+|||+ =|+.+++.|.+.|++|++.+-..... ....++.+..+-+.|.+.+.+.++ ++++||
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI 70 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI 70 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence 58999999876 59999999999999887766653221 124577888899989999999998 799999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.++....+.++.++|++.+ ++.+-+
T Consensus 71 DATHPfA~~is~~a~~ac~~~~-ipyiR~ 98 (248)
T PRK08057 71 DATHPYAAQISANAAAACRALG-IPYLRL 98 (248)
T ss_pred ECCCccHHHHHHHHHHHHHHhC-CcEEEE
Confidence 9999998899999999999999 877766
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.3e-06 Score=70.94 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=64.8
Q ss_pred ceEEEEccCcchhHHHHHHHHh-C--CCCEEEEEcCCCCCCCchhhHhHhhhcCC-cEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVK-A--GHPTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~-~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+|+|+||+|.+|++++..|.. . +++++++.|+.... . ..-.+.+.+ ...+.+ .+.+++.+.++++|+|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~-g----~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiV 73 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP-G----VAVDLSHIPTAVKIKG--FSGEDPTPALEGADVV 73 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc-c----eehhhhcCCCCceEEE--eCCCCHHHHcCCCCEE
Confidence 6899999999999999998855 3 35788888873211 1 001122212 223343 2233445667899999
Q ss_pred EEcccchh-------------hhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|.++|... .....++++++++.+ .+++|.
T Consensus 74 IitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivi 115 (312)
T PRK05086 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIG 115 (312)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 99999743 335678889999887 777665
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-06 Score=73.78 Aligned_cols=93 Identities=19% Similarity=0.334 Sum_probs=60.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi 81 (310)
+|+|+|+||||++|+.+++.|.++ .++|+.++++.+.. +.+......+...|+.+.++++.. ++++|+||
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG--------~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf 109 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG--------QSFGSVFPHLITQDLPNLVAVKDADFSDVDAVF 109 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC--------CCchhhCccccCccccceecCCHHHhcCCCEEE
Confidence 579999999999999999999998 47899998863321 111111112223444333333322 57899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+++.. ...+++.++ +.| .++|-
T Consensus 110 ~Alp~~---~s~~i~~~~-~~g--~~VID 132 (381)
T PLN02968 110 CCLPHG---TTQEIIKAL-PKD--LKIVD 132 (381)
T ss_pred EcCCHH---HHHHHHHHH-hCC--CEEEE
Confidence 998853 577777776 445 35553
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-05 Score=56.94 Aligned_cols=93 Identities=20% Similarity=0.331 Sum_probs=55.5
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEE-EccCCCHHHHHHHhcCCCEEEEc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV-VGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||.|+||||++|+.+++.|.++. .++..+..+..+. ..+...... ...+..-. .-+ .+.+. +.++|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~-g~~~~~~~~-~~~~~~~~~~~~-~~~~~----~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSA-GKPLSEVFP-HPKGFEDLSVED-ADPEE----LSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTT-TSBHHHTTG-GGTTTEEEBEEE-TSGHH----HTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecccc-CCeeehhcc-ccccccceeEee-cchhH----hhcCCEEEec
Confidence 69999999999999999999965 4555544443211 111211111 11122222 222 34443 4789999999
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.. ....+...+.+.| + ++|-
T Consensus 74 ~~~~---~~~~~~~~~~~~g-~-~ViD 95 (121)
T PF01118_consen 74 LPHG---ASKELAPKLLKAG-I-KVID 95 (121)
T ss_dssp SCHH---HHHHHHHHHHHTT-S-EEEE
T ss_pred Cchh---HHHHHHHHHhhCC-c-EEEe
Confidence 8854 4677777888888 5 4443
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=7.7e-06 Score=70.99 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=59.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEE-EccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV-VGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~~~~~~~~~d~Vi 81 (310)
|++|+|+||||++|+.+++.|.++ ++++.++.++.+.. +.. ... .+.+..+ ..++.+.+.. .++++|+||
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g--~~l---~~~-~~~~~~~~~~~~~~~~~~--~~~~vD~Vf 73 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG--KPL---SDV-HPHLRGLVDLVLEPLDPE--ILAGADVVF 73 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC--cch---HHh-CcccccccCceeecCCHH--HhcCCCEEE
Confidence 589999999999999999999987 47888777642211 011 110 1111111 2233343332 456899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+++.. ....++.++.+.| +++|-
T Consensus 74 ~alP~~---~~~~~v~~a~~aG--~~VID 97 (343)
T PRK00436 74 LALPHG---VSMDLAPQLLEAG--VKVID 97 (343)
T ss_pred ECCCcH---HHHHHHHHHHhCC--CEEEE
Confidence 998864 5677777777776 45553
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.4e-05 Score=69.19 Aligned_cols=83 Identities=25% Similarity=0.302 Sum_probs=59.8
Q ss_pred CceEEEEccCcchhHH--HHHHHHhCCCCEEEEEcCCCCCCCc-------h-hhHhHhhhcCC--cEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKF--IVEASVKAGHPTFVLVRESTLSAPS-------K-SQLLDHFKNLG--VNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~--l~~~L~~~g~~V~~~~R~~~~~~~~-------~-~~~~~~l~~~~--~~~v~~D~~d~~~~~ 71 (310)
.+++|||||++.+|.+ +++.| +.|.+|.++++........ . ....+.+...+ +..+.+|+.+.+++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4799999999999999 89999 9999998888642211000 0 11122233333 567899999998887
Q ss_pred HHhc-------CCCEEEEcccch
Q 021596 72 NAIK-------QVDVVISTVGHA 87 (310)
Q Consensus 72 ~~~~-------~~d~Vi~~a~~~ 87 (310)
++++ ++|+++|+++..
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccC
Confidence 7765 589999999876
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.8e-05 Score=71.89 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=72.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
|+|+|+|+ |.+|+++++.|.+.|++|+++.++ +.+. +.+.. .+++++.+|..+.+.+.++ ++++|.|+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~-----~~~~---~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~ 71 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTD-----EERL---RRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIA 71 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECC-----HHHH---HHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence 58999996 999999999999999999999998 4333 33333 5789999999999999988 789999999
Q ss_pred cccchhhhhHHHHHHHHHHc-CCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEA-GNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~-~~v~~~v~ 110 (310)
+.+... ....+...+++. + ..++|.
T Consensus 72 ~~~~~~--~n~~~~~~~r~~~~-~~~ii~ 97 (453)
T PRK09496 72 VTDSDE--TNMVACQIAKSLFG-APTTIA 97 (453)
T ss_pred ecCChH--HHHHHHHHHHHhcC-CCeEEE
Confidence 877542 333455566665 5 445443
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.7e-05 Score=77.23 Aligned_cols=90 Identities=22% Similarity=0.163 Sum_probs=67.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CC-------------EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HP-------------TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~ 69 (310)
|++|+|+|+ |++|+.+++.|.+.. .+ |.+.+++ +.+++.+.. ..++++.+..|+.|.++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~-----~~~a~~la~-~~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY-----LKDAKETVE-GIENAEAVQLDVSDSES 641 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCC-----HHHHHHHHH-hcCCCceEEeecCCHHH
Confidence 789999994 999999999998764 33 6666666 323321111 12478889999999999
Q ss_pred HHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 70 LVNAIKQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+.++++++|+|+++++... +..++++|.++|
T Consensus 642 L~~~v~~~DaVIsalP~~~---H~~VAkaAieaG 672 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPASC---HAVVAKACIELK 672 (1042)
T ss_pred HHHhhcCCCEEEECCCchh---hHHHHHHHHHcC
Confidence 9999999999999999753 456666666666
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.4e-05 Score=59.96 Aligned_cols=194 Identities=17% Similarity=0.181 Sum_probs=111.6
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CC-cEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LG-VNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~-~~~v~~D~~d~~~~~~~~~---- 75 (310)
.|++||+|-.. .|+-.+++.|.++|.++.....+. ...+.++++.+ .+ ..++++|+.+.+++.++|.
T Consensus 6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-----~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-----RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-----HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 48999999764 599999999999999998888873 22233334322 22 4578899999999998886
Q ss_pred ---CCCEEEEcccchh--------hh------------hHHHHHHHHHHcCC----ccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL--------LA------------DQVKIIAAIKEAGN----VTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------~~------------~~~~~~~aa~~~~~----v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
+.|.++|+.++.. .. ....++..+++... -.-++. +-+|. + ..-|.
T Consensus 81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs-~-----r~vPn 154 (259)
T COG0623 81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS-E-----RVVPN 154 (259)
T ss_pred hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc-e-----eecCC
Confidence 5899999998765 00 01123333332210 011222 22222 1 22344
Q ss_pred chhhHHHHHHHHHHHH----H---cCCCEEEEecceeccc---cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 128 KSVYYDVKARIRRAVE----A---EGIPYTYVESYCFDGY---FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~----~---~~~~~~i~rp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.+..|.+|+..|.-.| + .|+++-.+..|.+-.- .+..+... ++... .-.....-+..+||+
T Consensus 155 YNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~----l~~~e-----~~aPl~r~vt~eeVG 225 (259)
T COG0623 155 YNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKM----LKENE-----ANAPLRRNVTIEEVG 225 (259)
T ss_pred CchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHH----HHHHH-----hhCCccCCCCHHHhh
Confidence 6788999999986554 2 3555555554433211 11111000 00000 001113456688999
Q ss_pred HHHHHHhcC--CccCCceEEEc
Q 021596 198 TYTIKAVDD--PRTLNKNLYIQ 217 (310)
Q Consensus 198 ~~~~~~l~~--~~~~~~~~~~~ 217 (310)
...+.++.+ ...-|++.|+-
T Consensus 226 ~tA~fLlSdLssgiTGei~yVD 247 (259)
T COG0623 226 NTAAFLLSDLSSGITGEIIYVD 247 (259)
T ss_pred hhHHHHhcchhcccccceEEEc
Confidence 888887754 23356777774
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=58.20 Aligned_cols=95 Identities=18% Similarity=0.228 Sum_probs=58.0
Q ss_pred ceEEEEccCcchhHHHHHHHHh-CCCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVK-AGHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|+|+|.|++|..|+.+++.+.+ .++++.+. .|+.+....... ..+ .+.. .....-.++++++++.+|+||+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~---g~~--~~~~--~~~~~v~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDV---GEL--AGIG--PLGVPVTDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBC---HHH--CTSS--T-SSBEBS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchh---hhh--hCcC--CcccccchhHHHhcccCCEEEE
Confidence 6899999999999999999999 56786655 555422100000 111 0111 1111112567778888999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
... .......++.|.++| ++.++-
T Consensus 74 fT~---p~~~~~~~~~~~~~g-~~~ViG 97 (124)
T PF01113_consen 74 FTN---PDAVYDNLEYALKHG-VPLVIG 97 (124)
T ss_dssp ES----HHHHHHHHHHHHHHT--EEEEE
T ss_pred cCC---hHHhHHHHHHHHhCC-CCEEEE
Confidence 984 356778888888888 544443
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.9e-06 Score=69.66 Aligned_cols=71 Identities=21% Similarity=0.335 Sum_probs=50.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-C-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-G-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+||||+|++|+.++++|.++ | .+++++.|+ ..+.. .+.. ++..+++ .++.+++.++|+|+
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~-----~~rl~---~La~---el~~~~i---~~l~~~l~~aDiVv 220 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQ-----QERLQ---ELQA---ELGGGKI---LSLEEALPEADIVV 220 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCC-----HHHHH---HHHH---HhccccH---HhHHHHHccCCEEE
Confidence 479999999999999999999865 5 588888887 22332 1211 1112333 34667888999999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9998643
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=4e-05 Score=56.22 Aligned_cols=91 Identities=21% Similarity=0.244 Sum_probs=74.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
++|+++| +| .|.+++..|.+.|++|++++.+ +... +.....+++++.+|+.+++- +.-+++|.|+.+=
T Consensus 18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~-----~~aV---~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysir 85 (134)
T PRK04148 18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDIN-----EKAV---EKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIR 85 (134)
T ss_pred CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeC
Confidence 6899999 78 9999999999999999999998 3332 44455689999999998763 3456899999987
Q ss_pred cchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 85 GHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++. ..+..+++.|++.+ +..+|.
T Consensus 86 pp~--el~~~~~~la~~~~-~~~~i~ 108 (134)
T PRK04148 86 PPR--DLQPFILELAKKIN-VPLIIK 108 (134)
T ss_pred CCH--HHHHHHHHHHHHcC-CCEEEE
Confidence 764 67889999999998 887776
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.3e-06 Score=71.53 Aligned_cols=72 Identities=21% Similarity=0.307 Sum_probs=57.1
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++|+|||| +|.+|.++++.|.++|++|+++.++.+.. ...+ +...|+.+.
T Consensus 188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-----------~~~~--~~~~dv~~~ 254 (399)
T PRK05579 188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-----------TPAG--VKRIDVESA 254 (399)
T ss_pred CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-----------CCCC--cEEEccCCH
Confidence 478999999 89999999999999999999999874211 0122 345688998
Q ss_pred HHHHHHhc----CCCEEEEcccchh
Q 021596 68 ESLVNAIK----QVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~~~~~----~~d~Vi~~a~~~~ 88 (310)
+++.+++. ++|++||+|+...
T Consensus 255 ~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 255 QEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHhcCCCCEEEEcccccc
Confidence 88877764 6899999999754
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.7e-05 Score=53.78 Aligned_cols=92 Identities=26% Similarity=0.432 Sum_probs=69.3
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVISTVG 85 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~a~ 85 (310)
|+|+| .|.+|..+++.|.+.+.+|+++.++ +++. +.+...++.++.+|..|++.++++ +++++.|+.+.+
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d-----~~~~---~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRD-----PERV---EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESS-----HHHH---HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECC-----cHHH---HHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 67888 5899999999999977799999998 4333 556677899999999999999886 347999999887
Q ss_pred chhhhhHHHHHHHHHHcCCccEEc
Q 021596 86 HALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 86 ~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
.. .....++..+++.....+++
T Consensus 72 ~d--~~n~~~~~~~r~~~~~~~ii 93 (116)
T PF02254_consen 72 DD--EENLLIALLARELNPDIRII 93 (116)
T ss_dssp SH--HHHHHHHHHHHHHTTTSEEE
T ss_pred CH--HHHHHHHHHHHHHCCCCeEE
Confidence 54 45556666777644234444
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.5e-05 Score=66.99 Aligned_cols=83 Identities=18% Similarity=0.120 Sum_probs=56.4
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-C------CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH-----------
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-H------PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH----------- 67 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~------~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~----------- 67 (310)
+|.|+||+|.+|+.++..|...| . +++.++++.+. +..+-...|+.|.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence 79999999999999999999876 2 38888887410 0112222233322
Q ss_pred HHHHHHhcCCCEEEEcccchh-------------hhhHHHHHHHHHHc
Q 021596 68 ESLVNAIKQVDVVISTVGHAL-------------LADQVKIIAAIKEA 102 (310)
Q Consensus 68 ~~~~~~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~ 102 (310)
....+.++++|+|+++||... ....+.+.+.+++.
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 234567889999999999754 33345666666666
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.6e-05 Score=66.10 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=59.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.++++|+|| |.+|++++..|.+.|.+ |+++.|+.... ++. ...+.+.. ..+.+...|+.+.+++.+.++.+|+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~--~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFY--ERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHH--HHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 368999997 89999999999999986 99999984210 122 12233322 2345667899888888888888999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||++.+..
T Consensus 203 lINaTp~G 210 (289)
T PRK12548 203 LVNATLVG 210 (289)
T ss_pred EEEeCCCC
Confidence 99988754
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=98.03 E-value=6.2e-05 Score=61.95 Aligned_cols=95 Identities=26% Similarity=0.307 Sum_probs=75.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh--hcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
|+|+|+|||+ =|+.+++.|.+.|+ |.+.+-..-.. +.+ ..+..++..+-+.|.+.+.+.++ +++.|
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~--------~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~v 70 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG--------ELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAV 70 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH--------hhhccccCCceEEECCCCCHHHHHHHHHhCCCcEE
Confidence 7999999876 58999999999998 55443331111 111 12467888898889999999997 89999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|+.+.++....+.|+.++|++.| ++.+-+
T Consensus 71 IDATHPfA~~is~na~~a~~~~~-ipylR~ 99 (249)
T PF02571_consen 71 IDATHPFAAEISQNAIEACRELG-IPYLRF 99 (249)
T ss_pred EECCCchHHHHHHHHHHHHhhcC-cceEEE
Confidence 99999998899999999999999 887766
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.3e-05 Score=60.13 Aligned_cols=72 Identities=24% Similarity=0.160 Sum_probs=50.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|+|.| +|.||+.++..|.+.||+|..-+|+.++. .........+. + ...+..++.+.+|+|+..
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~----~~a~a~~l~~~---i-----~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKA----LAAAAAALGPL---I-----TGGSNEDAAALADVVVLA 67 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhH----HHHHHHhhccc---c-----ccCChHHHHhcCCEEEEe
Confidence 57788777 89999999999999999999997775432 21111111112 1 122344567789999999
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
.++..
T Consensus 68 VP~~a 72 (211)
T COG2085 68 VPFEA 72 (211)
T ss_pred ccHHH
Confidence 99765
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.4e-05 Score=66.11 Aligned_cols=86 Identities=13% Similarity=0.260 Sum_probs=58.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEE---EEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTF---VLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~---~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|+|+||||++|+.+++.|.+++|++. .+.+..+.. +.+...+...+..|+. . ..++++|+||.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g--------~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~ 67 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG--------RKVTFKGKELEVNEAK-I----ESFEGIDIALF 67 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC--------CeeeeCCeeEEEEeCC-h----HHhcCCCEEEE
Confidence 589999999999999999999887644 444653321 1111234556666664 2 23578999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+++.. .+..++..+.+.| + ++|
T Consensus 68 a~g~~---~s~~~a~~~~~~G-~-~VI 89 (339)
T TIGR01296 68 SAGGS---VSKEFAPKAAKCG-A-IVI 89 (339)
T ss_pred CCCHH---HHHHHHHHHHHCC-C-EEE
Confidence 99965 4666667776777 5 455
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.2e-05 Score=64.88 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=59.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhh----cCC-cEEEEccCCCHHHHHHHhcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFK----NLG-VNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~----~~~-~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|++|+|+||||++|+.+++.|.++.. +++++.++.++. ........... ..+ ..-......+++. +.++
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~-G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 77 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSA-GKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDV 77 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhc-CCcccccccccccccccccccceEEEeCCHHH----hcCC
Confidence 58999999999999999999998764 888885654322 11110000000 000 0001111124443 3589
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
|+||.+.+.. ....+++++.+.| ++.+..|
T Consensus 78 DvVf~a~p~~---~s~~~~~~~~~~G-~~vIDls 107 (349)
T PRK08664 78 DIVFSALPSD---VAGEVEEEFAKAG-KPVFSNA 107 (349)
T ss_pred CEEEEeCChh---HHHHHHHHHHHCC-CEEEECC
Confidence 9999987754 3566668888888 7777664
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=8.4e-05 Score=61.89 Aligned_cols=83 Identities=18% Similarity=0.146 Sum_probs=53.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|+|+|++|.+|+.+++.+.+. +.++.++...... +. ... -..++...+++.++++++|+|++
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~----~~---~~~-------~~~~i~~~~dl~~ll~~~DvVid 66 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGS----PL---VGQ-------GALGVAITDDLEAVLADADVLID 66 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc----cc---ccc-------CCCCccccCCHHHhccCCCEEEE
Confidence 579999999999999999988875 5787765443221 11 000 11122223445556668899998
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++++. ....++.+|.++|
T Consensus 67 ~t~p~---~~~~~~~~al~~G 84 (257)
T PRK00048 67 FTTPE---ATLENLEFALEHG 84 (257)
T ss_pred CCCHH---HHHHHHHHHHHcC
Confidence 88654 3466666777766
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.2e-05 Score=64.53 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=78.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH-HHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE-SLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~-~~~~~~~~~d~Vi 81 (310)
+++||++| +||+.+.++..|.+++ .+|++.+|..++ . .+.....+++.|..|+.+.+ +++...+..|.|+
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~-----~--~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~vi 73 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKD-----A--EALVKGINIKAVSLDVADEELALRKEVKPLDLVI 73 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHH-----H--HHHhcCCCccceEEEccchHHHHHhhhcccceee
Confidence 57999999 8999999999999987 578888887332 2 12233466899999999998 9999999999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccCCCCCC
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPSEFGND 116 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~ 116 (310)
.+.+.+ ....+.+.|... .++.+.|+|-.+
T Consensus 74 SLlP~t---~h~lVaK~~i~~--~~~~vtsSyv~p 103 (445)
T KOG0172|consen 74 SLLPYT---FHPLVAKGCIIT--KEDSVTSSYVDP 103 (445)
T ss_pred eeccch---hhHHHHHHHHHh--hcccccccccCH
Confidence 999965 355666777765 477787777554
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.4e-05 Score=57.33 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=49.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
|||.|+|++|.+|++++..|...+ .+++.++++.... ......++... .......... .+.+ .++++|+|+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~-~g~a~Dl~~~~~~~~~~~~i~~-~~~~----~~~~aDivv 74 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKA-EGEALDLSHASAPLPSPVRITS-GDYE----ALKDADIVV 74 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHH-HHHHHHHHHHHHGSTEEEEEEE-SSGG----GGTTESEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccc-eeeehhhhhhhhhccccccccc-cccc----ccccccEEE
Confidence 689999999999999999999998 4799999983221 01111111111 1222221111 2333 477999999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
.++|...
T Consensus 75 itag~~~ 81 (141)
T PF00056_consen 75 ITAGVPR 81 (141)
T ss_dssp ETTSTSS
T ss_pred Eeccccc
Confidence 9998754
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=9.1e-05 Score=67.18 Aligned_cols=88 Identities=19% Similarity=0.322 Sum_probs=64.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+++ +|..+++.|++.|++|++.+++.... -....+.+...++.++.+|..+ +...++|+||++
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~---~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~ 75 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ---LKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVS 75 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEEC
Confidence 47999999766 99999999999999999998873211 1222344555678888888876 235679999999
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
++... ....+.+|++.|
T Consensus 76 ~g~~~---~~~~~~~a~~~~ 92 (450)
T PRK14106 76 PGVPL---DSPPVVQAHKKG 92 (450)
T ss_pred CCCCC---CCHHHHHHHHCC
Confidence 88643 334666666655
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.5e-05 Score=62.84 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=44.5
Q ss_pred CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh-------cCCCEEEEccc
Q 021596 13 TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI-------KQVDVVISTVG 85 (310)
Q Consensus 13 tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~-------~~~d~Vi~~a~ 85 (310)
+|.+|.++++.|+++|++|+++.|.... .... ...+|+.+.+++.+++ .++|++||+||
T Consensus 24 SGgIG~AIA~~la~~Ga~Vvlv~~~~~l------------~~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg 89 (227)
T TIGR02114 24 TGHLGKIITETFLSAGHEVTLVTTKRAL------------KPEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMA 89 (227)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEcChhhc------------cccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence 7899999999999999999988764210 0101 1346777776666543 36899999998
Q ss_pred chh
Q 021596 86 HAL 88 (310)
Q Consensus 86 ~~~ 88 (310)
...
T Consensus 90 v~d 92 (227)
T TIGR02114 90 VSD 92 (227)
T ss_pred ecc
Confidence 653
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00021 Score=61.89 Aligned_cols=84 Identities=17% Similarity=0.277 Sum_probs=53.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++|+|+||||++|+.+++.|.+++|+ +..+....+. .+ .+...+..++..++. . ..++++|+|
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa---Gk-----~~~~~~~~~~v~~~~-~----~~~~~~D~v 73 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA---GK-----KVTFEGRDYTVEELT-E----DSFDGVDIA 73 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC---CC-----eeeecCceeEEEeCC-H----HHHcCCCEE
Confidence 579999999999999999999998874 4434333211 11 111123333333442 2 235789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|.+++.. .+..++..+.+.|
T Consensus 74 f~a~p~~---~s~~~~~~~~~~g 93 (344)
T PLN02383 74 LFSAGGS---ISKKFGPIAVDKG 93 (344)
T ss_pred EECCCcH---HHHHHHHHHHhCC
Confidence 9999864 4666777776667
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.79 E-value=7.6e-05 Score=55.65 Aligned_cols=74 Identities=20% Similarity=0.387 Sum_probs=52.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhH-hhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLD-HFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++++|+|+ |..|+.++..|.+.|.+ |+++.|+ .++...+. .+....++++.. .+ +.+.+.++|+||
T Consensus 12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt-----~~ra~~l~~~~~~~~~~~~~~--~~---~~~~~~~~DivI 80 (135)
T PF01488_consen 12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRT-----PERAEALAEEFGGVNIEAIPL--ED---LEEALQEADIVI 80 (135)
T ss_dssp TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESS-----HHHHHHHHHHHTGCSEEEEEG--GG---HCHHHHTESEEE
T ss_pred CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECC-----HHHHHHHHHHcCccccceeeH--HH---HHHHHhhCCeEE
Confidence 479999995 99999999999999975 9999998 55554332 232233444443 23 336677899999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
++++...
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9998764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00026 Score=64.34 Aligned_cols=97 Identities=20% Similarity=0.335 Sum_probs=70.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
+++|+|+|+ |.+|+.+++.|.+.|++|+++.++ +++.+.+.. ...++.++.+|..+.+.+.++ ++++|.|+.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~-----~~~~~~~~~-~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERD-----PERAEELAE-ELPNTLVLHGDGTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH-HCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence 578999995 999999999999999999999988 443322221 124788999999999998654 458999998
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+... ....+...|++.+ .++++.
T Consensus 304 ~~~~~~--~n~~~~~~~~~~~-~~~ii~ 328 (453)
T PRK09496 304 LTNDDE--ANILSSLLAKRLG-AKKVIA 328 (453)
T ss_pred CCCCcH--HHHHHHHHHHHhC-CCeEEE
Confidence 776542 2233444566666 666654
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00011 Score=64.03 Aligned_cols=94 Identities=13% Similarity=0.156 Sum_probs=56.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEE-EccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFV-VGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~~~~~~~~~d~Vi 81 (310)
|+|+|+||||++|+.+++.|.++. ++++.+ +++.+.. .+. ... .+..... ..++.+. +..++++++|+||
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sag--k~~---~~~-~~~l~~~~~~~~~~~-~~~~~~~~~DvVf 73 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAG--KPV---SEV-HPHLRGLVDLNLEPI-DEEEIAEDADVVF 73 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcC--CCh---HHh-CccccccCCceeecC-CHHHhhcCCCEEE
Confidence 589999999999999999999873 677754 4442111 111 110 1111111 1112211 1223335899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+++.. .+..++.++.+.| +++|-
T Consensus 74 ~alP~~---~s~~~~~~~~~~G--~~VID 97 (346)
T TIGR01850 74 LALPHG---VSAELAPELLAAG--VKVID 97 (346)
T ss_pred ECCCch---HHHHHHHHHHhCC--CEEEe
Confidence 999854 5777888887777 45553
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00027 Score=60.80 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=57.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|...++|.|+||||++|..+++.|.++.| +++.++...+.. .+. . +...... ++ ++ +. ..+.++
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG--~~~---~-~~~~~~~-v~-~~---~~--~~~~~~ 67 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAG--ETL---R-FGGKSVT-VQ-DA---AE--FDWSQA 67 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCC--ceE---E-ECCcceE-EE-eC---ch--hhccCC
Confidence 66678999999999999999999999654 566665442211 111 0 1111111 11 22 21 224689
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
|+||.+++.. .+..++..+.+.| + ++|
T Consensus 68 Dvvf~a~p~~---~s~~~~~~~~~~g-~-~VI 94 (336)
T PRK08040 68 QLAFFVAGRE---ASAAYAEEATNAG-C-LVI 94 (336)
T ss_pred CEEEECCCHH---HHHHHHHHHHHCC-C-EEE
Confidence 9999999854 5667777777777 4 344
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00064 Score=52.50 Aligned_cols=33 Identities=33% Similarity=0.325 Sum_probs=29.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
||+|.++| .|..|+.+++.|++.|++|++..|+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~ 33 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRS 33 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccc
Confidence 67999999 7999999999999999999999998
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00061 Score=55.04 Aligned_cols=96 Identities=18% Similarity=0.157 Sum_probs=73.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|+|+|+|||+- ++.+++.|...+..+.+.+-..... .+..+....+.+-..+.+.+.+.++ ++|.+|
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~---------~l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llI 71 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGA---------KLAEQIGPVRVGGFLGAEGLAAFLREEGIDLLI 71 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccc---------cchhccCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence 689999998864 8899999999885444444332221 1112222356666778999999988 799999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+...++....+.|.+++|++.| ++.+.+
T Consensus 72 DATHPyAa~iS~Na~~aake~g-ipy~r~ 99 (257)
T COG2099 72 DATHPYAARISQNAARAAKETG-IPYLRL 99 (257)
T ss_pred ECCChHHHHHHHHHHHHHHHhC-CcEEEE
Confidence 9999888899999999999999 988877
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00012 Score=57.89 Aligned_cols=138 Identities=15% Similarity=0.110 Sum_probs=79.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE--------ccCCCHHHHHHHhc-
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV--------GDVLNHESLVNAIK- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~--------~D~~d~~~~~~~~~- 75 (310)
+-||+||++..||..++..+.+.+.+.....++.... + ..+..+.. +|......+.+.++
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a-~----------~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~ 75 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLA-E----------LEGLKVAYGDDFVHVVGDITEEQLLGALREA 75 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccc-c----------ccceEEEecCCcceechHHHHHHHHHHHHhh
Confidence 5699999999999999999999886544443332221 1 12333333 44433333333332
Q ss_pred ------CCCEEEEcccchh--------------------------hhhHHHHHHHHHHcCCc-cEEcc-CCCCCCccccC
Q 021596 76 ------QVDVVISTVGHAL--------------------------LADQVKIIAAIKEAGNV-TRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~--------------------------~~~~~~~~~aa~~~~~v-~~~v~-s~~~~~~~~~~ 121 (310)
+-|.|||+||... +....-++...++.. + +-+|+ |+.....
T Consensus 76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p-~~~~vVnvSS~aav~---- 150 (253)
T KOG1204|consen 76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP-VNGNVVNVSSLAAVR---- 150 (253)
T ss_pred hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC-ccCeEEEecchhhhc----
Confidence 4799999999754 111112222223222 2 23444 4433221
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-----c-CCCEEEEecceeccc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-----E-GIPYTYVESYCFDGY 160 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-----~-~~~~~i~rp~~~~~~ 160 (310)
|+ +....|+.+|++.+.+++. + ++.+..++||++-..
T Consensus 151 -p~-~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~ 193 (253)
T KOG1204|consen 151 -PF-SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ 193 (253)
T ss_pred -cc-cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence 22 2357899999999998864 3 666777789887653
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=61.22 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=55.4
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH----------
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---------- 68 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---------- 68 (310)
+|.|+||+|.+|+.++..|...+. ++++++++.... ..+-+..|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 589999999999999999998652 588998863321 1122233333322
Q ss_pred -HHHHHhcCCCEEEEcccchh-------------hhhHHHHHHHHHHc
Q 021596 69 -SLVNAIKQVDVVISTVGHAL-------------LADQVKIIAAIKEA 102 (310)
Q Consensus 69 -~~~~~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~ 102 (310)
...+.++++|+|++++|... ....+.+.+...+.
T Consensus 67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 23467889999999999753 33345566666665
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00012 Score=59.53 Aligned_cols=73 Identities=29% Similarity=0.275 Sum_probs=49.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-h----hcCCc--EEEEccCCCHHHHHHHhcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F----KNLGV--NFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l----~~~~~--~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+|.|+||+|.+|+.++..|.+.|++|.+..|+. ++...+.. . ...++ ..... + ..++++.+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~-----~~~~~l~~~~~~~~~~~g~~~~~~~~---~---~~ea~~~a 69 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL-----EKAEEAAAKALEELGHGGSDIKVTGA---D---NAEAAKRA 69 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH-----HHHHHHHHHHHhhccccCCCceEEEe---C---hHHHHhcC
Confidence 5899999999999999999999999999999883 33321111 1 11121 11111 1 23456789
Q ss_pred CEEEEcccchh
Q 021596 78 DVVISTVGHAL 88 (310)
Q Consensus 78 d~Vi~~a~~~~ 88 (310)
|+||.++....
T Consensus 70 DvVilavp~~~ 80 (219)
T TIGR01915 70 DVVILAVPWDH 80 (219)
T ss_pred CEEEEECCHHH
Confidence 99999988664
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00037 Score=58.50 Aligned_cols=86 Identities=23% Similarity=0.320 Sum_probs=52.1
Q ss_pred CCCC--ceEEEEccCcchhHHHHHHHHhC--CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MASK--SKILSIGGTGYIGKFIVEASVKA--GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~~--~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|++| ++|.|+| .|.+|+.+++.|.+. ++++.++ +|+ +++.+... ...+... -..+.+ +++.
T Consensus 1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~-----~~~a~~~a--~~~g~~~---~~~~~e---ell~ 66 (271)
T PRK13302 1 MSSRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRD-----PQRHADFI--WGLRRPP---PVVPLD---QLAT 66 (271)
T ss_pred CCCCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCC-----HHHHHHHH--HhcCCCc---ccCCHH---HHhc
Confidence 6665 7899999 799999999999873 6777755 444 32321111 1111100 123333 4456
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++|+|+-+++... ...+...+.++|
T Consensus 67 ~~D~Vvi~tp~~~---h~e~~~~aL~aG 91 (271)
T PRK13302 67 HADIVVEAAPASV---LRAIVEPVLAAG 91 (271)
T ss_pred CCCEEEECCCcHH---HHHHHHHHHHcC
Confidence 7999999988642 345555555656
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00053 Score=64.32 Aligned_cols=94 Identities=19% Similarity=0.282 Sum_probs=74.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
++|+|.| .|.+|+.+++.|.++|+++++++++ +++. +.++..+..++.||.+|++.++++ ++++|.++.+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v---~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERD-----ISAV---NLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECC-----HHHH---HHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 5788888 7999999999999999999999998 4444 445567899999999999999876 4589999988
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
.+.. .....++..+++.....+++
T Consensus 472 ~~d~--~~n~~i~~~~r~~~p~~~Ii 495 (601)
T PRK03659 472 CNEP--EDTMKIVELCQQHFPHLHIL 495 (601)
T ss_pred eCCH--HHHHHHHHHHHHHCCCCeEE
Confidence 8765 45666777787764233444
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00011 Score=63.73 Aligned_cols=80 Identities=18% Similarity=0.272 Sum_probs=53.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC-----CcEEEEccCCCHHHHHHHhc
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL-----GVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~~~~~~~ 75 (310)
|+.+|+|.|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+...... +.... ..+.-.++..++++
T Consensus 1 ~~~~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~-----~~~~~~i~~~~~~~~~~~g~~~~-~~~~~~~~~~e~~~ 73 (328)
T PRK14618 1 MHHGMRVAVLG-AGAWGTALAVLAASKGVPVRLWARR-----PEFAAALAAERENREYLPGVALP-AELYPTADPEEALA 73 (328)
T ss_pred CCCCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhCcccccCCCCcCC-CCeEEeCCHHHHHc
Confidence 78889999998 7999999999999999999999997 3333333222111 11100 00111123445667
Q ss_pred CCCEEEEcccch
Q 021596 76 QVDVVISTVGHA 87 (310)
Q Consensus 76 ~~d~Vi~~a~~~ 87 (310)
++|+|+.+....
T Consensus 74 ~aD~Vi~~v~~~ 85 (328)
T PRK14618 74 GADFAVVAVPSK 85 (328)
T ss_pred CCCEEEEECchH
Confidence 899999998866
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00016 Score=63.70 Aligned_cols=56 Identities=16% Similarity=0.324 Sum_probs=46.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+++|.|+||.|.+|+.++..|.+.|++|++..|+.. ++..+++.++|+||.+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~----------------------------~~~~~~~~~aDlVila 149 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW----------------------------DRAEDILADAGMVIVS 149 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc----------------------------hhHHHHHhcCCEEEEe
Confidence 579999999999999999999999999999998610 1233556789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 150 vP~~ 153 (374)
T PRK11199 150 VPIH 153 (374)
T ss_pred CcHH
Confidence 8865
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0006 Score=63.55 Aligned_cols=95 Identities=21% Similarity=0.360 Sum_probs=71.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
.+|+|.| .|.+|+++++.|.++|++|++++.+ +++. +.++..+...+.+|.+|++.++++ ++++|.|+-+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d-----~~~~---~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETS-----RTRV---DELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECC-----HHHH---HHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 4788998 7999999999999999999999998 4444 444567899999999999998865 3478988887
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.. ....+++.++++.....+++.
T Consensus 489 ~~~~--~~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 489 IPNG--YEAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred cCCh--HHHHHHHHHHHHHCCCCeEEE
Confidence 7654 234456666665432344443
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00047 Score=59.81 Aligned_cols=87 Identities=16% Similarity=0.317 Sum_probs=55.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|++|.|.||||++|+.+++.|+++ .++ ++.++...+.. +. ..+. +-.....++.|.+. ++++|+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~---~~---~~f~--g~~~~v~~~~~~~~----~~~~Di 68 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG---AA---PSFG--GKEGTLQDAFDIDA----LKKLDI 68 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC---cc---cccC--CCcceEEecCChhH----hcCCCE
Confidence 579999999999999999966655 466 66655442211 11 1111 21222334444443 468999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
||.+++.. .+..+...+.+.| ++
T Consensus 69 vf~a~~~~---~s~~~~~~~~~aG-~~ 91 (369)
T PRK06598 69 IITCQGGD---YTNEVYPKLRAAG-WQ 91 (369)
T ss_pred EEECCCHH---HHHHHHHHHHhCC-CC
Confidence 99999854 5777777777777 65
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00029 Score=61.94 Aligned_cols=72 Identities=26% Similarity=0.329 Sum_probs=54.7
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++|+|||| ||.+|..+++.|..+|++|+++.+..... .+.++ ...|+.+.
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~~--~~~~v~~~ 251 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPGV--KSIKVSTA 251 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCCc--EEEEeccH
Confidence 378999999 46799999999999999999988774321 02223 45788888
Q ss_pred HHH-HHHh----cCCCEEEEcccchh
Q 021596 68 ESL-VNAI----KQVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~-~~~~----~~~d~Vi~~a~~~~ 88 (310)
+++ .+++ .++|++|++|+...
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEcccccc
Confidence 877 5444 26899999999865
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00092 Score=57.27 Aligned_cols=78 Identities=19% Similarity=0.239 Sum_probs=48.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCC--CCCCCchhhHhHhhhcCCcEEEEccC-CCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRES--TLSAPSKSQLLDHFKNLGVNFVVGDV-LNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~--~~~~~~~~~~~~~l~~~~~~~v~~D~-~d~~~~~~~~~~~d~ 79 (310)
|+|.|+|+||.+|..++..|+..|+ +|++++|+. ........+....+...+... .... .| .. .++++|+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~d---~~-~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISSD---LS-DVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECCC---HH-HhCCCCE
Confidence 6899999999999999999999986 499999953 211111111111111111111 1111 12 22 4789999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||.+++..
T Consensus 76 Viitag~p 83 (309)
T cd05294 76 VIITAGVP 83 (309)
T ss_pred EEEecCCC
Confidence 99999853
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00044 Score=54.24 Aligned_cols=72 Identities=19% Similarity=0.331 Sum_probs=46.6
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++||||+| ||..|..+++.+..+|++|+.+....+-. .+.+++.+.. .+.
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~i~v--~sa 69 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-----------PPPGVKVIRV--ESA 69 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---SSH
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-----------ccccceEEEe--cch
Confidence 367888876 78999999999999999999999873211 1447777765 344
Q ss_pred HHHH----HHhcCCCEEEEcccchh
Q 021596 68 ESLV----NAIKQVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~----~~~~~~d~Vi~~a~~~~ 88 (310)
+++. +.+..+|++|++|+...
T Consensus 70 ~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 70 EEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhhhhccccCcceeEEEecchhh
Confidence 4444 44457899999999876
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0014 Score=56.60 Aligned_cols=87 Identities=20% Similarity=0.334 Sum_probs=55.4
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHh-CCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVK-AGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~-~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|+. .++|.|+||||++|+.+++.|.+ ..++ ++.+....+.. +. -.+... ....-++ |++. ++
T Consensus 1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saG---k~---~~~~~~--~l~v~~~-~~~~----~~ 67 (347)
T PRK06728 1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAG---KT---VQFKGR--EIIIQEA-KINS----FE 67 (347)
T ss_pred CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCC---CC---eeeCCc--ceEEEeC-CHHH----hc
Confidence 665 46999999999999999999995 5566 65565442211 11 011111 2222222 3333 46
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++|+||.+++.. .+..+...+.+.|
T Consensus 68 ~~Divf~a~~~~---~s~~~~~~~~~~G 92 (347)
T PRK06728 68 GVDIAFFSAGGE---VSRQFVNQAVSSG 92 (347)
T ss_pred CCCEEEECCChH---HHHHHHHHHHHCC
Confidence 899999999754 5677777777777
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00091 Score=57.50 Aligned_cols=147 Identities=14% Similarity=0.079 Sum_probs=82.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCC--CCCchhhHhHhhhc--CCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTL--SAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~--~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~ 72 (310)
+++|.|+|++|++|+.++..|+..|. ++++++++... ......+....... .++++. . .+ .+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D--DP----NV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c--Cc----HH
Confidence 47999999999999999999998873 68888885332 11111111100000 112221 1 12 34
Q ss_pred HhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcC--CccEEccCCCCCCccc------cCCCCCCcchhh
Q 021596 73 AIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAG--NVTRFFPSEFGNDVDR------AHGAVEPAKSVY 131 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~--~v~~~v~s~~~~~~~~------~~~~~~~~~~~y 131 (310)
.++++|+|+.++|... ....+.+.+...+.+ +..-++.| .+.+- ...+..|....|
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs---NPvD~~t~~~~k~sg~~p~~~Vi 151 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG---NPCNTNALIAMKNAPDIPPDNFT 151 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec---CcHHHHHHHHHHHcCCCChHheE
Confidence 5789999999998744 233445566666554 11112223 11110 110113346677
Q ss_pred HHHHHHHHHHH----HHcCCCEEEEecce-eccc
Q 021596 132 YDVKARIRRAV----EAEGIPYTYVESYC-FDGY 160 (310)
Q Consensus 132 ~~~K~~~e~~l----~~~~~~~~i~rp~~-~~~~ 160 (310)
|.++...+++- +..+++...+|.-. +++.
T Consensus 152 G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 152 AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 77777765544 34688888888644 4554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0012 Score=53.87 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=29.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEE-EEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTF-VLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~-~~~R~~~ 39 (310)
||+|+|.|++|..|+.+++.+.+.. .++. ++.|..+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 6899999999999999999999876 5554 5566643
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00066 Score=57.70 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=52.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|++|.|.||||++|..+++.|.++.+ ++..+..+... ++.+ ....++++|+||.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------------~~~~---~~~~~~~~DvvFl 56 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------------DAAA---RRELLNAADVAIL 56 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------------cccC---chhhhcCCCEEEE
Confidence 57999999999999999999998873 55555443110 1111 1234568999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+.+.. .+..++..+.+.| + ++|
T Consensus 57 alp~~---~s~~~~~~~~~~g-~-~VI 78 (313)
T PRK11863 57 CLPDD---AAREAVALIDNPA-T-RVI 78 (313)
T ss_pred CCCHH---HHHHHHHHHHhCC-C-EEE
Confidence 98754 4666777776666 4 455
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0012 Score=57.22 Aligned_cols=102 Identities=24% Similarity=0.304 Sum_probs=68.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC----------------CchhhHh-Hhhh--cCC--cEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA----------------PSKSQLL-DHFK--NLG--VNFVV 61 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~----------------~~~~~~~-~~l~--~~~--~~~v~ 61 (310)
.++|+|+| .|.+|+++++.|...|. ++++++++.-..+ ..|...+ +.+. .+. ++.+.
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 36899999 58899999999999996 7888888741100 0122211 1221 233 45556
Q ss_pred ccCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 62 ~D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.|++ .+.+.++++++|+|+.+..... ....+-++|.+.+ ++.+..
T Consensus 103 ~~~~-~~~~~~~~~~~DlVid~~D~~~--~r~~in~~~~~~~-ip~i~~ 147 (338)
T PRK12475 103 TDVT-VEELEELVKEVDLIIDATDNFD--TRLLINDLSQKYN-IPWIYG 147 (338)
T ss_pred ccCC-HHHHHHHhcCCCEEEEcCCCHH--HHHHHHHHHHHcC-CCEEEE
Confidence 6764 5678888999999999987653 3344667888887 666543
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=57.35 Aligned_cols=97 Identities=19% Similarity=0.206 Sum_probs=57.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhh---h-cCC-c-EEEEccCCCHHHHHHHhcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHF---K-NLG-V-NFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l---~-~~~-~-~~v~~D~~d~~~~~~~~~~~ 77 (310)
++|+|+|+||++|+++++.|.+++ .++..+.++.+.. .......... . ..+ . ....-++ +++ .+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~ 74 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSA-GKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDV 74 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhc-CCcchhhccccccCCCccccceeEEEeC-CHH----HhccC
Confidence 589999999999999999998877 5888775443211 1111000000 0 000 0 1111111 222 34689
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
|+|+.+++.. .+..+.+++.+.| ++.|..|
T Consensus 75 DvVf~a~p~~---~s~~~~~~~~~~G-~~VIDls 104 (341)
T TIGR00978 75 DIVFSALPSE---VAEEVEPKLAEAG-KPVFSNA 104 (341)
T ss_pred CEEEEeCCHH---HHHHHHHHHHHCC-CEEEECC
Confidence 9999999864 4555667777778 6666664
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=56.30 Aligned_cols=70 Identities=24% Similarity=0.227 Sum_probs=50.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|..+++.|.+.|++|.+..|+ +++. +.+...+... ..+.+++.+.++.+|+|+.+.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~-----~~~~---~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHD-----QDAV---KAMKEDRTTG----VANLRELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHcCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence 5799999 7999999999999999999999998 4343 2333333222 235566666666788888887
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 68 p~~ 70 (298)
T TIGR00872 68 PHG 70 (298)
T ss_pred Cch
Confidence 754
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00094 Score=56.64 Aligned_cols=91 Identities=15% Similarity=0.262 Sum_probs=55.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccC--CCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDV--LNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~--~d~~~~~~~~~~~d~ 79 (310)
|+||.|.||+|+.|..|++.|..+. .++...+.+.... .+. ... .++.. .+...+ .|.+.+ ..+++|+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g--~~~---~~~-~p~l~g~~~l~~~~~~~~~~--~~~~~Dv 73 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAG--KPV---SDV-HPNLRGLVDLPFQTIDPEKI--ELDECDV 73 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcC--Cch---HHh-CcccccccccccccCChhhh--hcccCCE
Confidence 6899999999999999999999987 3655554442111 011 111 12221 111222 233333 3457999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
||.+.+.. ....++......| ++
T Consensus 74 vFlalPhg---~s~~~v~~l~~~g-~~ 96 (349)
T COG0002 74 VFLALPHG---VSAELVPELLEAG-CK 96 (349)
T ss_pred EEEecCch---hHHHHHHHHHhCC-Ce
Confidence 99999865 4566666666666 44
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00051 Score=58.97 Aligned_cols=91 Identities=18% Similarity=0.257 Sum_probs=55.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH--------hhhcCCcE------EEEccCCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD--------HFKNLGVN------FVVGDVLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~--------~l~~~~~~------~v~~D~~d~~~ 69 (310)
+|+|.|+| .|.+|..++..|+++|++|+++.|+. ++.+... .+...+.. .....+.-..+
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~-----~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~ 75 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP-----AAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDS 75 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH-----HHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECc
Confidence 46899999 89999999999999999999999983 2221111 11122210 00000111124
Q ss_pred HHHHhcCCCEEEEcccchhhhhHHHHHHHHHH
Q 021596 70 LVNAIKQVDVVISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
+.++++++|+|+.+++... .....++..+.+
T Consensus 76 ~~~a~~~ad~Vi~avpe~~-~~k~~~~~~l~~ 106 (308)
T PRK06129 76 LADAVADADYVQESAPENL-ELKRALFAELDA 106 (308)
T ss_pred HHHhhCCCCEEEECCcCCH-HHHHHHHHHHHH
Confidence 5567789999999987542 223334444443
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0012 Score=56.25 Aligned_cols=68 Identities=24% Similarity=0.302 Sum_probs=45.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|++|.|+| .|.+|..++..|++.|++|++..|+ +++. +.+...++.. ..+..++++++|+||.+
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~-----~~~~---~~~~~~g~~~-------~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVN-----PQAV---DALVDKGATP-------AASPAQAAAGAEFVITM 64 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCC-----HHHH---HHHHHcCCcc-------cCCHHHHHhcCCEEEEe
Confidence 45899998 8999999999999999999999998 3333 2222223211 11233445667777776
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 65 vp~~ 68 (296)
T PRK15461 65 LPNG 68 (296)
T ss_pred cCCH
Confidence 6654
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=64.28 Aligned_cols=149 Identities=15% Similarity=0.216 Sum_probs=98.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE--ccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV--GDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~--~D~~d~~~~~~~~~----- 75 (310)
-+.++|+||-|..|..++++|.++|. .++..+|+.-+. .-++..++.++..|+++.. .|++..+.-..+++
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirt-GYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRT-GYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchh-hHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence 36899999999999999999999996 466667775433 3345556777777876654 56766666666655
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEE-ccCCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRF-FPSEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~-v~s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
.+-.|||+|.... ..++.|+=...++. .-.+.| +||+....... -..+.||.
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN------~GQtNYG~ 1920 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN------AGQTNYGL 1920 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC------Ccccccch
Confidence 3667888886543 22333333333332 113344 35665444222 24678999
Q ss_pred HHHHHHHHHHH---cCCCEEEEecceecc
Q 021596 134 VKARIRRAVEA---EGIPYTYVESYCFDG 159 (310)
Q Consensus 134 ~K~~~e~~l~~---~~~~~~i~rp~~~~~ 159 (310)
+...+|++.++ .|+|-+.+.-|.+++
T Consensus 1921 aNS~MERiceqRr~~GfPG~AiQWGAIGD 1949 (2376)
T KOG1202|consen 1921 ANSAMERICEQRRHEGFPGTAIQWGAIGD 1949 (2376)
T ss_pred hhHHHHHHHHHhhhcCCCcceeeeecccc
Confidence 99999999865 688888887666654
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0011 Score=55.49 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=67.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
-+.|.|+|+.| +|+--++.-.+.|++|++++++.++ |. +.++..|++....-..|++.++++.+-.|.++|+
T Consensus 182 G~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k----ke---ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~ 253 (360)
T KOG0023|consen 182 GKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK----KE---EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDT 253 (360)
T ss_pred CcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh----HH---HHHHhcCcceeEEecCCHHHHHHHHHhhcCccee
Confidence 47899999888 9999999999999999999998432 33 4455568887777777999888888755666665
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
+..........++..++..|
T Consensus 254 v~~~a~~~~~~~~~~lk~~G 273 (360)
T KOG0023|consen 254 VSNLAEHALEPLLGLLKVNG 273 (360)
T ss_pred eeeccccchHHHHHHhhcCC
Confidence 55332233455667777666
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00078 Score=51.47 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=49.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+|+ |.+|..+++.|.+.| ++|+++.|+ +++... .+.+ +...+..+..+.+ ++++++|+|+
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~-----~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~Dvvi 86 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRT-----LEKAKALAERF---GELGIAIAYLDLE---ELLAEADLII 86 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHH---hhcccceeecchh---hccccCCEEE
Confidence 478999996 999999999999996 789999998 333221 1222 1111222333433 3467899999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
.+++...
T Consensus 87 ~~~~~~~ 93 (155)
T cd01065 87 NTTPVGM 93 (155)
T ss_pred eCcCCCC
Confidence 9998753
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.003 Score=54.78 Aligned_cols=101 Identities=23% Similarity=0.326 Sum_probs=68.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC----------------CCchhhHh-Hhhh--cCC--cEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS----------------APSKSQLL-DHFK--NLG--VNFVV 61 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~----------------~~~~~~~~-~~l~--~~~--~~~v~ 61 (310)
..+|+|+| .|.+|+.+++.|...|. ++++++++.-.. ...|...+ +.+. .+. ++.+.
T Consensus 24 ~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 24 EKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 36899999 59999999999999996 788888863100 00122221 2222 233 44555
Q ss_pred ccCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 62 ~D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
.+++ .+.+.++++++|+|+.+.... .....+-++|.+.+ ++.+.
T Consensus 103 ~~~~-~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~-iP~i~ 146 (339)
T PRK07688 103 QDVT-AEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG-IPWIY 146 (339)
T ss_pred ccCC-HHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC-CCEEE
Confidence 6664 566778889999999998765 34446778888887 66554
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0021 Score=58.16 Aligned_cols=34 Identities=24% Similarity=0.188 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|.+|.|+| .|..|+.++..|+++||+|.+..|+.
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~ 34 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRTY 34 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34899999 89999999999999999999999983
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0038 Score=50.03 Aligned_cols=105 Identities=20% Similarity=0.220 Sum_probs=67.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhHh-Hhhh--cCCcEE--EEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQLL-DHFK--NLGVNF--VVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~~-~~l~--~~~~~~--v~~D 63 (310)
..+|+|.| .|.+|+.+++.|...|. ++++++++.-..+ ..|.+.+ +.+. .+.+++ +...
T Consensus 21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 36899999 79999999999999995 7888887731100 1122111 1222 234433 3334
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEF 113 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~ 113 (310)
+ +.+.+.+.++++|+||.+.... .....+-+.|++.+ ++.+..+..
T Consensus 100 i-~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~-ip~i~~~~~ 145 (202)
T TIGR02356 100 V-TAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG-TPLISAAVV 145 (202)
T ss_pred C-CHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEEec
Confidence 4 4466778889999999998764 34445778888887 554443433
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0027 Score=54.32 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=30.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|.+|+.+++.|++.|++|.+..|+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~ 32 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRN 32 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECC
Confidence 4899998 8999999999999999999999998
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0013 Score=55.69 Aligned_cols=70 Identities=21% Similarity=0.335 Sum_probs=51.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++++|+| .|.+|+.+++.|...|.+|++..|+ +.+. ......+...+ +.+++.+.++++|+||++
T Consensus 151 gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~-----~~~~---~~~~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 151 GSNVMVLG-FGRTGMTIARTFSALGARVFVGARS-----SADL---ARITEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 36899999 5999999999999999999999998 3222 11222233322 345677788899999998
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 217 ~P~~ 220 (287)
T TIGR02853 217 IPAL 220 (287)
T ss_pred CChH
Confidence 8754
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00057 Score=52.43 Aligned_cols=86 Identities=17% Similarity=0.337 Sum_probs=54.3
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-----CCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-----LGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
||.|+| +|..|.+++..|.++|++|+...|+ ++..+.++.-.. ++..+-. .+.=.++++++++++|+|
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~-----~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~I 73 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRD-----EEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADII 73 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETSC-----HHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEE
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEE
Confidence 689999 6999999999999999999999998 333322222111 1221111 111113456788999999
Q ss_pred EEcccchhhhhHHHHHHHHHH
Q 021596 81 ISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~ 101 (310)
+.+.+.. ....+++.++.
T Consensus 74 iiavPs~---~~~~~~~~l~~ 91 (157)
T PF01210_consen 74 IIAVPSQ---AHREVLEQLAP 91 (157)
T ss_dssp EE-S-GG---GHHHHHHHHTT
T ss_pred EecccHH---HHHHHHHHHhh
Confidence 9988865 45566666655
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0013 Score=45.75 Aligned_cols=71 Identities=32% Similarity=0.467 Sum_probs=47.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCC---CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG---HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g---~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
||.|+| +|.+|+++++.|++.| ++|... .|+ +++...+. ...++.+...| ..++++.+|+||
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~-----~~~~~~~~--~~~~~~~~~~~------~~~~~~~advvi 66 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRS-----PEKAAELA--KEYGVQATADD------NEEAAQEADVVI 66 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESS-----HHHHHHHH--HHCTTEEESEE------HHHHHHHTSEEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCc-----HHHHHHHH--HhhccccccCC------hHHhhccCCEEE
Confidence 688996 8999999999999999 899955 887 44443222 22334333322 334556899999
Q ss_pred Ecccchhhh
Q 021596 82 STVGHALLA 90 (310)
Q Consensus 82 ~~a~~~~~~ 90 (310)
.+..+....
T Consensus 67 lav~p~~~~ 75 (96)
T PF03807_consen 67 LAVKPQQLP 75 (96)
T ss_dssp E-S-GGGHH
T ss_pred EEECHHHHH
Confidence 999987533
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0021 Score=55.33 Aligned_cols=81 Identities=19% Similarity=0.099 Sum_probs=50.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--C-----CEEEEEcCCCC--CCCchhhHhHhhhc--CCcEEEEccCCCHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--H-----PTFVLVRESTL--SAPSKSQLLDHFKN--LGVNFVVGDVLNHES 69 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~-----~V~~~~R~~~~--~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~ 69 (310)
|..+++|.|+|++|.+|+.++..|+..+ . ++..++++... ......+....... .++.+. . .+
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~--- 74 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D--DP--- 74 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c--Ch---
Confidence 7778899999999999999999998876 2 68888885321 11111111111000 122221 1 12
Q ss_pred HHHHhcCCCEEEEcccchh
Q 021596 70 LVNAIKQVDVVISTVGHAL 88 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~ 88 (310)
-+.++++|+|+.++|...
T Consensus 75 -y~~~~daDiVVitaG~~~ 92 (326)
T PRK05442 75 -NVAFKDADVALLVGARPR 92 (326)
T ss_pred -HHHhCCCCEEEEeCCCCC
Confidence 245789999999998643
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0012 Score=59.48 Aligned_cols=69 Identities=33% Similarity=0.488 Sum_probs=48.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+|+||+|.+|+.+++.|.+.|++|++++|+.. +.. +.....++.. ..+..+++.++|+||.++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~-----~~~--~~a~~~gv~~-------~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPK-----KGK--EVAKELGVEY-------ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChH-----HHH--HHHHHcCCee-------ccCHHHHhccCCEEEEec
Confidence 58999999999999999999999999999999832 211 1111223321 112344567899999998
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 67 p~~ 69 (437)
T PRK08655 67 PIN 69 (437)
T ss_pred CHH
Confidence 864
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0014 Score=51.37 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|.|+| .|.||+.+++.|..-|.+|++++|+.
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~ 69 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP 69 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC
Confidence 47999998 89999999999999999999999984
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0019 Score=54.99 Aligned_cols=69 Identities=17% Similarity=0.323 Sum_probs=52.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++++|+| .|.+|+.++..|...|.+|+++.|+ +.+. +.....+...+ +.+++.+.++++|+||++
T Consensus 152 g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~-----~~~~---~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 152 GSNVLVLG-FGRTGMTLARTLKALGANVTVGARK-----SAHL---ARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 47999999 5889999999999999999999998 3333 22223454443 234667788899999999
Q ss_pred ccc
Q 021596 84 VGH 86 (310)
Q Consensus 84 a~~ 86 (310)
++.
T Consensus 218 ~p~ 220 (296)
T PRK08306 218 IPA 220 (296)
T ss_pred CCh
Confidence 864
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0067 Score=48.39 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=67.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCC----------------Cchhh----HhHhhhcCCcE--EE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSA----------------PSKSQ----LLDHFKNLGVN--FV 60 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~----------------~~~~~----~~~~l~~~~~~--~v 60 (310)
..+|+|.|++| +|+.+++.|...| .++++++.+.-..+ ..|.+ .++++ .+.++ .+
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~ 96 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIV 96 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence 36899999655 9999999999999 46888876531100 01111 12222 24444 34
Q ss_pred EccCCC-HHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCCCC
Q 021596 61 VGDVLN-HESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGN 115 (310)
Q Consensus 61 ~~D~~d-~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~ 115 (310)
..++.+ .+...+.++++|+|+.+.... .....+-+.|++.+ ++.+..+++|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~~--~~~~~ln~~c~~~~-ip~i~~~~~G~ 149 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEENY--ERTAKVNDVCRKHH-IPFISCATYGL 149 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEEeecC
Confidence 444432 445667788999999886653 45566778999988 76665555444
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0024 Score=54.53 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=49.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+|.|+|++|.+|+.++..|...+ .+++.++.+ ....... .+.+. ...+.... ..+++-+.++++|+|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~al----DL~~~~~~~~i~~~~--~~~~~y~~~~daDiv 72 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAA----DLSHINTPAKVTGYL--GPEELKKALKGADVV 72 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeeh----HhHhCCCcceEEEec--CCCchHHhcCCCCEE
Confidence 689999999999999999999888 478888887 2211111 12222 12222110 112244568899999
Q ss_pred EEcccchh
Q 021596 81 ISTVGHAL 88 (310)
Q Consensus 81 i~~a~~~~ 88 (310)
+.++|...
T Consensus 73 vitaG~~~ 80 (310)
T cd01337 73 VIPAGVPR 80 (310)
T ss_pred EEeCCCCC
Confidence 99999743
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00049 Score=54.19 Aligned_cols=32 Identities=31% Similarity=0.465 Sum_probs=26.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|++|..++..|.+.||+|++++.+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCC
Confidence 7999998 8999999999999999999999998
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0028 Score=57.52 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=32.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
+++|.++| .|..|+.+++.|+++|++|.+..|+.
T Consensus 6 ~~~IG~IG-LG~MG~~mA~nL~~~G~~V~V~NRt~ 39 (493)
T PLN02350 6 LSRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTT 39 (493)
T ss_pred CCCEEEEe-eHHHHHHHHHHHHhCCCeEEEECCCH
Confidence 67999999 99999999999999999999999983
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00078 Score=58.32 Aligned_cols=85 Identities=18% Similarity=0.293 Sum_probs=53.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEE-------EccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV-------VGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v-------~~D~~d~~~~~~~~~~ 76 (310)
||+|.|+| .|.+|..++..|.+.|++|+++.|+ +.+.+ .+...+.... .....-..+..+++++
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARD-----PEQAA---EINADRENPRYLPGIKLPDNLRATTDLAEALAD 71 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-----HHHHH---HHHHcCcccccCCCCcCCCCeEEeCCHHHHHhC
Confidence 57999999 6999999999999999999999997 33332 2222111000 0001111234456678
Q ss_pred CCEEEEcccchhhhhHHHHHHHHH
Q 021596 77 VDVVISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
+|+||.+.... ....+++.+.
T Consensus 72 ~D~vi~~v~~~---~~~~v~~~l~ 92 (325)
T PRK00094 72 ADLILVAVPSQ---ALREVLKQLK 92 (325)
T ss_pred CCEEEEeCCHH---HHHHHHHHHH
Confidence 99999999864 3444444443
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0029 Score=59.54 Aligned_cols=88 Identities=18% Similarity=0.396 Sum_probs=70.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
++|+|.| .|.+|+.+++.|.++|++++++..+ +++. +.++..+..++.+|.+|++.++++ ++++|.|+.+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v---~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHD-----PDHI---ETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred CcEEEEe-cChHHHHHHHHHHhCCCCEEEEECC-----HHHH---HHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 5799998 7999999999999999999999998 4444 445567899999999999998865 3479999988
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.... .....++..+++..
T Consensus 472 ~~d~--~~n~~i~~~ar~~~ 489 (621)
T PRK03562 472 IDDP--QTSLQLVELVKEHF 489 (621)
T ss_pred eCCH--HHHHHHHHHHHHhC
Confidence 8654 45566777777653
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0021 Score=56.80 Aligned_cols=68 Identities=24% Similarity=0.330 Sum_probs=53.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|++|+|+|+ |.+|+.++..+.+.|++|++++.+.... . .. -.-+.+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p-a------~~---~ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP-A------AQ---VADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc-h------hH---hCceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 579999995 8999999999999999999998774322 0 11 1234667899999999999999998754
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0026 Score=55.31 Aligned_cols=75 Identities=27% Similarity=0.391 Sum_probs=53.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~d~ 79 (310)
.+.|||.||+|.+|+..++.+...|...++.+++ .++.+..+.+ |+. ...|+.+++..+...+ ++|+
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-----~e~~~l~k~l---GAd-~vvdy~~~~~~e~~kk~~~~~~Dv 228 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-----KEKLELVKKL---GAD-EVVDYKDENVVELIKKYTGKGVDV 228 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-----cchHHHHHHc---CCc-EeecCCCHHHHHHHHhhcCCCccE
Confidence 4689999999999999999999999555555555 3344444444 322 2356767655555544 5999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
|++|++..
T Consensus 229 VlD~vg~~ 236 (347)
T KOG1198|consen 229 VLDCVGGS 236 (347)
T ss_pred EEECCCCC
Confidence 99999974
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0013 Score=56.09 Aligned_cols=68 Identities=25% Similarity=0.329 Sum_probs=49.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|.|+| .|.+|+.+++.|.+.|++|.+..|+ +.+. +.+...++.. .++..++++++|+||.+
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~-----~~~~---~~~~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRN-----PEAV---AEVIAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHH---HHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 47999998 7999999999999999999999988 3333 2232334321 12334566789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 66 vp~~ 69 (296)
T PRK11559 66 LPNS 69 (296)
T ss_pred CCCH
Confidence 8754
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0022 Score=56.05 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=50.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|-..++|+|+|.+|.+|+.+++.|.+. +++|++++|.... ..+ ..+.++++|+
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~-----------------------~~~---~~~~v~~aDl 54 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG-----------------------SLD---PATLLQRADV 54 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc-----------------------cCC---HHHHhcCCCE
Confidence 555789999999999999999999975 7889888875210 112 2345678899
Q ss_pred EEEcccchhhhhHHHHHHHHH
Q 021596 80 VISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
||.|++.. .+..+++...
T Consensus 55 VilavPv~---~~~~~l~~l~ 72 (370)
T PRK08818 55 LIFSAPIR---HTAALIEEYV 72 (370)
T ss_pred EEEeCCHH---HHHHHHHHHh
Confidence 99888854 3444444433
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00087 Score=57.66 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=34.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+.+++|.|+| .|.+|..++..|++.|++|+++.++.
T Consensus 1 ~~~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~ 37 (311)
T PRK06130 1 MNPIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVME 37 (311)
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 77788999998 69999999999999999999999883
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00042 Score=61.94 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=33.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+ +|+|.|+| .|++|..++..|.+.||+|+++.++
T Consensus 1 m~-~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~ 35 (415)
T PRK11064 1 MS-FETISVIG-LGYIGLPTAAAFASRQKQVIGVDIN 35 (415)
T ss_pred CC-ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCC
Confidence 66 68999998 7999999999999999999999998
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0042 Score=53.23 Aligned_cols=74 Identities=23% Similarity=0.271 Sum_probs=54.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|..-|++|+++.|..+.. .++... ...+++.++++++|+|+.+
T Consensus 136 g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~-------------~~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 136 DFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW-------------PGVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------CCceee----cccccHHHHHhcCCEEEEC
Confidence 37999998 89999999999999999999998863211 122211 1345788889999999998
Q ss_pred ccchhhhhHHHHHH
Q 021596 84 VGHALLADQVKIIA 97 (310)
Q Consensus 84 a~~~~~~~~~~~~~ 97 (310)
.+.+. .+.+++.
T Consensus 198 lPlt~--~T~~li~ 209 (312)
T PRK15469 198 LPNTP--ETVGIIN 209 (312)
T ss_pred CCCCH--HHHHHhH
Confidence 88764 4445443
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0047 Score=53.04 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=49.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhc-----CCcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKN-----LGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
.+||.|+|+ |.+|+.++..|+..|. ++++++++...... ....+.+ ..+.+. . .+. +.+++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g----~~~Dl~~~~~~~~~~~i~-~--~~~----~~~~~ 73 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEG----DAMDLSHAVPFTSPTKIY-A--GDY----SDCKD 73 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHH----HHHHHHhhccccCCeEEE-e--CCH----HHhCC
Confidence 479999997 9999999999999985 79999997543211 1122221 122222 2 222 24789
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+||.++|...
T Consensus 74 adivIitag~~~ 85 (315)
T PRK00066 74 ADLVVITAGAPQ 85 (315)
T ss_pred CCEEEEecCCCC
Confidence 999999998743
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0081 Score=50.36 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=68.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhHh-Hhhh--cCCcEE--EEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQLL-DHFK--NLGVNF--VVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~~-~~l~--~~~~~~--v~~D 63 (310)
..+|+|.| .|.+|+.+++.|...|. ++++++.+.=..+ ..|.+.. +.+. ++.+++ +...
T Consensus 27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~ 105 (287)
T PRK08223 27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEG 105 (287)
T ss_pred cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 35899999 69999999999999994 6777666521100 1222222 2222 244444 4444
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCCCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGN 115 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~ 115 (310)
++ .+...++++++|+|+++........-..+-++|++.+ ++.+.-+..|.
T Consensus 106 l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~-iP~V~~~~~g~ 155 (287)
T PRK08223 106 IG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG-IPALTAAPLGM 155 (287)
T ss_pred cC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC-CCEEEEeccCC
Confidence 43 4556778899999998876542234456778899988 65555454443
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0028 Score=55.76 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=54.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
.+|+|+|+ |-+|..+++.|...|.+|.++.|+ +.+.+ .+....-..+..+..+.+.+.+.+.++|+||.++
T Consensus 168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~-----~~~~~---~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDIN-----IDRLR---QLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHH---HHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 57999985 999999999999999999999987 33332 2211111123345667888899999999999998
Q ss_pred cc
Q 021596 85 GH 86 (310)
Q Consensus 85 ~~ 86 (310)
+.
T Consensus 239 ~~ 240 (370)
T TIGR00518 239 LI 240 (370)
T ss_pred cc
Confidence 54
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.004 Score=56.46 Aligned_cols=87 Identities=15% Similarity=0.178 Sum_probs=60.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~ 82 (310)
.++|+|+|++| +|..+++.|.+.|++|.+..++.... ....+.+...++.+..+... .. .+. ++|.||.
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~----~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~ 74 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSE----NPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVK 74 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccc----hhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEE
Confidence 46899999877 99999999999999999998764221 12224455567777655322 22 133 4899999
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+|... ...++++|++.|
T Consensus 75 s~gi~~---~~~~~~~a~~~~ 92 (447)
T PRK02472 75 NPGIPY---TNPMVEKALEKG 92 (447)
T ss_pred CCCCCC---CCHHHHHHHHCC
Confidence 988643 345677777776
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0021 Score=49.68 Aligned_cols=56 Identities=23% Similarity=0.345 Sum_probs=45.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+++.+|..+++.|.++|.+|+++.|+. +.+.+.+..+|+||.+
T Consensus 44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEEEEc
Confidence 47999999755679999999999998898888861 2455677889999998
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++...
T Consensus 95 t~~~~ 99 (168)
T cd01080 95 VGKPG 99 (168)
T ss_pred CCCCc
Confidence 87643
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0029 Score=54.34 Aligned_cols=73 Identities=19% Similarity=0.256 Sum_probs=46.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcC----Cc-EEEEccCCCHHHHHHHhcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNL----GV-NFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~----~~-~~v~~D~~d~~~~~~~~~~~ 77 (310)
||+|.|+|| |.+|..++..|...|. +|++++++.... +... ..+... .. ..+.. -.| + +.++++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~---~~~~-~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~a 71 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVP---QGKA-LDIAEAAPVEGFDTKITG-TND---Y-EDIAGS 71 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchh---HHHH-HHHHhhhhhcCCCcEEEe-CCC---H-HHHCCC
Confidence 689999997 9999999999998875 899999974322 1111 111111 11 01111 122 2 347899
Q ss_pred CEEEEcccc
Q 021596 78 DVVISTVGH 86 (310)
Q Consensus 78 d~Vi~~a~~ 86 (310)
|+||.+++.
T Consensus 72 DiVii~~~~ 80 (307)
T PRK06223 72 DVVVITAGV 80 (307)
T ss_pred CEEEECCCC
Confidence 999999864
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0097 Score=47.71 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=63.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+| .|.+|..-++.|++.|.+|++++.+... .+..+ ...+++++..++.. + .+++++.||-
T Consensus 9 gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~-------~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~ 75 (205)
T TIGR01470 9 GRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELES-------ELTLLAEQGGITWLARCFDA-D----ILEGAFLVIA 75 (205)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCH-------HHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEE
Confidence 47999999 5999999999999999999999876321 11223 23468899988863 2 2578999998
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+.+.. .....+...|++.+
T Consensus 76 at~d~--~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 76 ATDDE--ELNRRVAHAARARG 94 (205)
T ss_pred CCCCH--HHHHHHHHHHHHcC
Confidence 87754 35567888888776
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.09 Score=47.62 Aligned_cols=88 Identities=19% Similarity=0.275 Sum_probs=60.6
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
.++|+|.|+| |.+|..+++.|++.|| +|+.+..+... -.| +.-..++.++-..+|
T Consensus 7 p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~-------------i~G-------~~~~~sl~~lp~~~D 66 (447)
T TIGR02717 7 PKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGE-------------ILG-------VKAYPSVLEIPDPVD 66 (447)
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCc-------------cCC-------ccccCCHHHCCCCCC
Confidence 5789999998 6789999999999998 57666544110 012 112223444445789
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEcc--CCCCC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFP--SEFGN 115 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~--s~~~~ 115 (310)
.++.+.+. .....+++.|.+.| ++.++. +.|+.
T Consensus 67 lavi~vp~---~~~~~~l~e~~~~g-v~~~vi~s~gf~e 101 (447)
T TIGR02717 67 LAVIVVPA---KYVPQVVEECGEKG-VKGAVVITAGFKE 101 (447)
T ss_pred EEEEecCH---HHHHHHHHHHHhcC-CCEEEEECCCccc
Confidence 99988874 45778888888888 888654 44543
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0056 Score=51.28 Aligned_cols=93 Identities=22% Similarity=0.255 Sum_probs=56.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----------cCCcEEEEccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----------NLGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----------~~~~~~v~~D~~d~~~~~~~~ 74 (310)
++|.++| .|..|..++..|++.||+|++..|++.+. .+.+.... -....+|..=+.|.+++++++
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka----~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~ 75 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKA----AELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVL 75 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhh----hHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHH
Confidence 5799998 99999999999999999999999994331 21111100 012334444445555555555
Q ss_pred cC----------CCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 75 KQ----------VDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 75 ~~----------~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+ =.++|++.... ...++.+.+++++.|
T Consensus 76 ~g~~g~~~~~~~G~i~IDmSTis-p~~a~~~a~~~~~~G 113 (286)
T COG2084 76 FGENGLLEGLKPGAIVIDMSTIS-PETARELAAALAAKG 113 (286)
T ss_pred hCccchhhcCCCCCEEEECCCCC-HHHHHHHHHHHHhcC
Confidence 32 12334443333 455666666766666
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0068 Score=51.96 Aligned_cols=90 Identities=20% Similarity=0.243 Sum_probs=55.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
++|.|+| +|.+|+.++..|+..| ++|.+++|+.... ......+.... .....+.. .+.+ .++++|+
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~-~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~aDI 71 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKA-EGEALDLEDALAFLPSPVKIKA---GDYS----DCKDADI 71 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchh-hHhHhhHHHHhhccCCCeEEEc---CCHH----HhCCCCE
Confidence 4899999 5999999999999999 6899999985432 11111111111 11222222 2322 3579999
Q ss_pred EEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 80 VISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
||.+++... ....+.+.+.+++.+
T Consensus 72 VIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~ 108 (306)
T cd05291 72 VVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG 108 (306)
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999998743 333455666666654
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.005 Score=54.78 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=35.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|.++|+|||||++..+|..+++.|.+.|++|++++.+.
T Consensus 1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 77889999999999999999999999999999998873
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0017 Score=54.59 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=52.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCchhhHhHhhhcC-CcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFKNL-GVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~l~~~-~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
||+|.|+| .|.+|+.++..|.+.| ++|.+++|+ +++. +.+... ++.+. . +..++++.+|+
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~-----~~~~---~~~~~~~g~~~~----~---~~~~~~~~adv 65 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPS-----PEKR---AALAEEYGVRAA----T---DNQEAAQEADV 65 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCC-----HHHH---HHHHHhcCCeec----C---ChHHHHhcCCE
Confidence 68999999 6999999999999998 788899998 3333 222221 33221 1 22344568999
Q ss_pred EEEcccchhhhhHHHHHHHHHH
Q 021596 80 VISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
||.+.... ....+++.++.
T Consensus 66 Vil~v~~~---~~~~v~~~l~~ 84 (267)
T PRK11880 66 VVLAVKPQ---VMEEVLSELKG 84 (267)
T ss_pred EEEEcCHH---HHHHHHHHHHh
Confidence 99988754 34444444443
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0088 Score=50.10 Aligned_cols=84 Identities=21% Similarity=0.220 Sum_probs=49.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|.|+|. |.+|+.+++.|.+. +.++.++...... ..+. ...+ ..++.+ ..|.+.+ -.++|+|+.
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~--~~~~--~~~~-~~~~~~----~~d~~~l---~~~~DvVve 67 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHS--IDAV--RRAL-GEAVRV----VSSVDAL---PQRPDLVVE 67 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCC--HHHH--hhhh-ccCCee----eCCHHHh---ccCCCEEEE
Confidence 579999995 99999999999886 4677666533211 1111 1111 112111 2344444 246899999
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++.. ........+.++|
T Consensus 68 ~t~~~---~~~e~~~~aL~aG 85 (265)
T PRK13303 68 CAGHA---ALKEHVVPILKAG 85 (265)
T ss_pred CCCHH---HHHHHHHHHHHcC
Confidence 99864 3345555666666
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0047 Score=51.74 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=48.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEE-EEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFV-LVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~-~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
||+|.|+| .|.+|+.+++.|.+.+ .++.+ +.|+ +++..... ...+... +.| +++++.++|+|
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~-----~~~a~~~a--~~~~~~~----~~~---~~ell~~~DvV 65 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN-----LEKAENLA--SKTGAKA----CLS---IDELVEDVDLV 65 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC-----HHHHHHHH--HhcCCee----ECC---HHHHhcCCCEE
Confidence 57999999 7999999999998863 56554 4444 22221111 1112211 123 34445789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+.++++. ....++..+.++|
T Consensus 66 vi~a~~~---~~~~~~~~al~~G 85 (265)
T PRK13304 66 VECASVN---AVEEVVPKSLENG 85 (265)
T ss_pred EEcCChH---HHHHHHHHHHHcC
Confidence 9998754 2344445555555
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.017 Score=43.41 Aligned_cols=103 Identities=21% Similarity=0.300 Sum_probs=65.8
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCC--------------CCCchhhHhH-hhh--cCCcE--EEEccCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQLLD-HFK--NLGVN--FVVGDVL 65 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~~-~l~--~~~~~--~v~~D~~ 65 (310)
+|+|.| .|.+|+.+++.|...|. ++++++.+.-. -...|.+.+. .++ .+.++ .+..++.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 589999 59999999999999996 67777655210 0012222221 111 23443 3444443
Q ss_pred CHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCC
Q 021596 66 NHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEF 113 (310)
Q Consensus 66 d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~ 113 (310)
+ +...+.++++|+|+.+.... .....+.++|++.+ ++.+.....
T Consensus 80 ~-~~~~~~~~~~diVi~~~d~~--~~~~~l~~~~~~~~-i~~i~~~~~ 123 (143)
T cd01483 80 E-DNLDDFLDGVDLVIDAIDNI--AVRRALNRACKELG-IPVIDAGGL 123 (143)
T ss_pred h-hhHHHHhcCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEcCC
Confidence 3 33466778999999998874 45677889999987 655544443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.012 Score=49.33 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=27.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVR 36 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R 36 (310)
|++|+|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 479999999999999999999874 578776544
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0083 Score=48.00 Aligned_cols=82 Identities=15% Similarity=0.170 Sum_probs=55.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+|| |.+|...++.|++.|++|+++.+.... .+..+ ....+.+...++.. ..+.++|.||.
T Consensus 10 ~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~-------~l~~l~~~~~i~~~~~~~~~-----~~l~~adlVia 76 (202)
T PRK06718 10 NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTE-------NLVKLVEEGKIRWKQKEFEP-----SDIVDAFLVIA 76 (202)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCH-------HHHHHHhCCCEEEEecCCCh-----hhcCCceEEEE
Confidence 479999995 999999999999999999999765221 11222 22345665554432 23578999999
Q ss_pred cccchhhhhHHHHHHHHH
Q 021596 83 TVGHALLADQVKIIAAIK 100 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~ 100 (310)
+++... ....+.+.|+
T Consensus 77 aT~d~e--lN~~i~~~a~ 92 (202)
T PRK06718 77 ATNDPR--VNEQVKEDLP 92 (202)
T ss_pred cCCCHH--HHHHHHHHHH
Confidence 877653 3455566663
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0017 Score=55.81 Aligned_cols=65 Identities=23% Similarity=0.325 Sum_probs=50.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|.|+| +|.+|+.+++.|.+.||+|++..|+.. +++.++++++|+|+.+
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------------~~~~~~~~~advvi~~ 54 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------------LSLAAVLADADVIVSA 54 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------------CCHHHHHhcCCEEEEE
Confidence 57999998 799999999999999999999999721 1234566789999998
Q ss_pred ccchhhhhHHHHHHHHH
Q 021596 84 VGHALLADQVKIIAAIK 100 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~ 100 (310)
.+.. ....+++.+.
T Consensus 55 vp~~---~~~~v~~~l~ 68 (308)
T PRK14619 55 VSMK---GVRPVAEQVQ 68 (308)
T ss_pred CChH---HHHHHHHHHH
Confidence 8853 3444455544
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0037 Score=52.94 Aligned_cols=75 Identities=13% Similarity=0.168 Sum_probs=51.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.+|.|.||||+.|..+++.|..+. .++..++.+.. .+..+ ..++++++|+||.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~~~~---~~~~~~~~D~vFla 56 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KDAAE---RAKLLNAADVAILC 56 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cCcCC---HhHhhcCCCEEEEC
Confidence 489999999999999999999986 35555543310 11112 23455789999999
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
++.. .+..++..+.+.| + ++|
T Consensus 57 lp~~---~s~~~~~~~~~~g-~-~VI 77 (310)
T TIGR01851 57 LPDD---AAREAVSLVDNPN-T-CII 77 (310)
T ss_pred CCHH---HHHHHHHHHHhCC-C-EEE
Confidence 8854 4666777776666 4 454
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0032 Score=53.79 Aligned_cols=75 Identities=19% Similarity=0.160 Sum_probs=48.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
||.|+|++|.+|+.++..|...+. ++++++++... .... .+.+. ...+.... +.+++.+.++++|+|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~----DL~~~~~~~~i~~~~--~~~~~~~~~~daDivv 72 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAA----DLSHIPTAASVKGFS--GEEGLENALKGADVVV 72 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEc----hhhcCCcCceEEEec--CCCchHHHcCCCCEEE
Confidence 689999999999999999998884 78888887511 1111 12221 12222101 1122446788999999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
.++|...
T Consensus 73 itaG~~~ 79 (312)
T TIGR01772 73 IPAGVPR 79 (312)
T ss_pred EeCCCCC
Confidence 9999743
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0047 Score=53.57 Aligned_cols=90 Identities=14% Similarity=0.234 Sum_probs=56.6
Q ss_pred ceEEEEccCcchhHHHHHHHH-hCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASV-KAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~-~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
++|.|.||||-+|+.+++.|. ++.++ ++.++...+.. + .....+.....-++.+.+ .+.++|+|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g---~-----~~~f~~~~~~v~~~~~~~----~~~~vDiv 68 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQ---A-----APSFGGTTGTLQDAFDID----ALKALDII 68 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCC---C-----cCCCCCCcceEEcCcccc----cccCCCEE
Confidence 489999999999999999999 55664 44444332211 1 111112222223333322 35789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCcc-EEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
|.+++. ..++.+...+.++| .. .+|-
T Consensus 69 ffa~g~---~~s~~~~p~~~~aG-~~~~VID 95 (366)
T TIGR01745 69 ITCQGG---DYTNEIYPKLRESG-WQGYWID 95 (366)
T ss_pred EEcCCH---HHHHHHHHHHHhCC-CCeEEEE
Confidence 999985 35778888888888 54 4443
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0063 Score=49.76 Aligned_cols=102 Identities=16% Similarity=0.167 Sum_probs=64.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCC--------------CCCchhhHh-Hhhh--cCC--cEEEEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQLL-DHFK--NLG--VNFVVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~-~~l~--~~~--~~~v~~D 63 (310)
..+|+|.| .|.+|+.+++.|...|. ++++++.+.-. -...|.+.+ +.+. .+. ++.+..+
T Consensus 21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~ 99 (228)
T cd00757 21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER 99 (228)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence 36899999 79999999999999995 56666443200 001222221 1121 133 4444445
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+ +.+.+.+.++++|+||.+..... ....+-++|++.+ ++.+..
T Consensus 100 i-~~~~~~~~~~~~DvVi~~~d~~~--~r~~l~~~~~~~~-ip~i~~ 142 (228)
T cd00757 100 L-DAENAEELIAGYDLVLDCTDNFA--TRYLINDACVKLG-KPLVSG 142 (228)
T ss_pred e-CHHHHHHHHhCCCEEEEcCCCHH--HHHHHHHHHHHcC-CCEEEE
Confidence 5 45677788889999999988653 3456778888887 554443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0031 Score=53.30 Aligned_cols=72 Identities=17% Similarity=0.231 Sum_probs=49.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC----CCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|+. |+|.++| +|.+|..+++.|++.| ++|++..|+.. .+. +.+. ..+++.. .+ ..++.+
T Consensus 1 ~~~-mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~----~~~---~~l~~~~g~~~~----~~---~~e~~~ 64 (279)
T PRK07679 1 MSI-QNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNE----TRL---QELHQKYGVKGT----HN---KKELLT 64 (279)
T ss_pred CCC-CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCH----HHH---HHHHHhcCceEe----CC---HHHHHh
Confidence 665 6899998 8999999999999998 77888888621 122 2222 2244322 12 234567
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+||.+..+..
T Consensus 65 ~aDvVilav~p~~ 77 (279)
T PRK07679 65 DANILFLAMKPKD 77 (279)
T ss_pred cCCEEEEEeCHHH
Confidence 8999999998764
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0041 Score=52.82 Aligned_cols=87 Identities=22% Similarity=0.280 Sum_probs=52.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|++|.|.||||.+|+.+++.|.++.+. +.++....+-. .+. ..+.... ..+.-+..|... ++++|+|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG--~~~---~~f~~~~-~~v~~~~~~~~~----~~~~Div 70 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAG--KKY---IEFGGKS-IGVPEDAADEFV----FSDVDIV 70 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccC--Ccc---ccccCcc-ccCccccccccc----cccCCEE
Confidence 579999999999999999999997643 34443332211 010 0000111 011111222222 3489999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|.++|.. .++.+...+.++|
T Consensus 71 f~~ag~~---~s~~~~p~~~~~G 90 (334)
T COG0136 71 FFAAGGS---VSKEVEPKAAEAG 90 (334)
T ss_pred EEeCchH---HHHHHHHHHHHcC
Confidence 9999854 4678888888888
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0043 Score=54.02 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=51.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|..-|.+|+++.|+.+.. + .... .+....+..+.......+++.++++.+|+|+.+
T Consensus 159 gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~-~--~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 159 GKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSE-P--EDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChh-h--hhhh-ccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 47999999 79999999999999999999998873211 0 0000 000011111111111445788899999999998
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++.+.
T Consensus 234 lPlt~ 238 (347)
T PLN02928 234 CTLTK 238 (347)
T ss_pred CCCCh
Confidence 88664
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0022 Score=55.36 Aligned_cols=78 Identities=28% Similarity=0.384 Sum_probs=52.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCc-EEEEcc-----CCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGV-NFVVGD-----VLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~-~~v~~D-----~~d~~~~~~~~ 74 (310)
|+|.|+| +|++|....--|.+.||+|++++.+ ++|.+.+..-.. ++. ++++-. +.=-.+.++++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid-----~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~ 74 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDID-----ESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV 74 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence 7899999 9999999999999999999999998 444433322111 111 011111 11123466778
Q ss_pred cCCCEEEEcccchh
Q 021596 75 KQVDVVISTVGHAL 88 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~ 88 (310)
+.+|++|.+.|...
T Consensus 75 ~~adv~fIavgTP~ 88 (414)
T COG1004 75 KDADVVFIAVGTPP 88 (414)
T ss_pred hcCCEEEEEcCCCC
Confidence 89999999988654
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0049 Score=52.33 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=54.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEE-----ccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVV-----GDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~-----~D~~d~~~~~~~~~~ 76 (310)
||+|.|+| +|.-|.+|+..|.++||+|+...|+ ++-. ..+.. .+..+.. .++.-..++.+++++
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~-----~~~~---~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ 71 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGRD-----EEIV---AEINETRENPKYLPGILLPPNLKATTDLAEALDG 71 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCCeeEEEecC-----HHHH---HHHHhcCcCccccCCccCCcccccccCHHHHHhc
Confidence 57999999 6999999999999999999999998 3333 22322 2333332 122233567888899
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|.|+...+...
T Consensus 72 ad~iv~avPs~~ 83 (329)
T COG0240 72 ADIIVIAVPSQA 83 (329)
T ss_pred CCEEEEECChHH
Confidence 999999988654
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0075 Score=51.66 Aligned_cols=86 Identities=22% Similarity=0.406 Sum_probs=64.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
.+|+|+|+ |.+|...++.+...|.+|++++|+ ++|.+..+++ +...+...- |.+.++.+-+.+|+|+.++
T Consensus 168 ~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~-----~~K~e~a~~l---GAd~~i~~~-~~~~~~~~~~~~d~ii~tv 237 (339)
T COG1064 168 KWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRS-----EEKLELAKKL---GADHVINSS-DSDALEAVKEIADAIIDTV 237 (339)
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCC-----hHHHHHHHHh---CCcEEEEcC-CchhhHHhHhhCcEEEECC
Confidence 68999995 599999999999999999999999 6666555544 544444333 6666665555599999999
Q ss_pred cchhhhhHHHHHHHHHHcC
Q 021596 85 GHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~ 103 (310)
+ . ......+++++..|
T Consensus 238 ~-~--~~~~~~l~~l~~~G 253 (339)
T COG1064 238 G-P--ATLEPSLKALRRGG 253 (339)
T ss_pred C-h--hhHHHHHHHHhcCC
Confidence 9 3 34556677777766
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0028 Score=53.51 Aligned_cols=72 Identities=19% Similarity=0.335 Sum_probs=48.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++++|+|+ |.+|+.++..|.+.| .+|+++.|+ .++.+.+ +.+.... .+..++ +..+.+.++|+||
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~-----~~~a~~l~~~~~~~~--~~~~~~----~~~~~~~~~DivI 190 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRT-----VERAEELAKLFGALG--KAELDL----ELQEELADFDLII 190 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhcc--ceeecc----cchhccccCCEEE
Confidence 468999995 999999999999999 789999998 3333222 2221111 011111 2234567899999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
++++..
T Consensus 191 naTp~g 196 (278)
T PRK00258 191 NATSAG 196 (278)
T ss_pred ECCcCC
Confidence 998754
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.013 Score=51.74 Aligned_cols=86 Identities=16% Similarity=0.191 Sum_probs=64.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
.+|+|+| .|.+|+.+++.|.++|++++++..+.. +.....+..++.+|.+|.+.++++ +++++.|+.+
T Consensus 241 ~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~----------~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 241 DHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL----------EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh----------hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 4688888 799999999999999999988886511 222345788999999999998876 3479999987
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.... .....++..+++.+
T Consensus 310 t~dD--~~Nl~ivL~ar~l~ 327 (393)
T PRK10537 310 RDND--ADNAFVVLAAKEMS 327 (393)
T ss_pred CCCh--HHHHHHHHHHHHhC
Confidence 7654 23444556677665
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.01 Score=50.69 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=30.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|.+|+.+++.|++.|++|.+..|+
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~ 32 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVN 32 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECC
Confidence 4799998 8999999999999999999999998
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0082 Score=50.83 Aligned_cols=81 Identities=12% Similarity=0.199 Sum_probs=50.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-Hhhhc-CCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKN-LGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++++|+|+ |..+++++-.|...|. +|+++.|+... .++.+.+ +.+.. .+..+...++.+.+.+.+.+.++|+|
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~--~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEF--FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccH--HHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 368999995 7779999999999994 79999998431 1132222 22211 11112223333333455566789999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|++.+..
T Consensus 201 INaTp~G 207 (288)
T PRK12749 201 TNGTKVG 207 (288)
T ss_pred EECCCCC
Confidence 9988654
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0044 Score=53.04 Aligned_cols=68 Identities=19% Similarity=0.301 Sum_probs=55.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|++|.|+| +|.+|+.++..-...|++|+++.-+..... . .-.-..+.++.+|++.++++.+++|+|=.
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA-~---------~va~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPA-A---------QVADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCch-h---------hcccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 57999999 699999999999999999999997754431 0 11235677888899999999999999844
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0046 Score=52.93 Aligned_cols=83 Identities=23% Similarity=0.343 Sum_probs=51.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC----CCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV----LNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~----~d~~~~~~~~~~~d~V 80 (310)
|+|+|+| +|.+|..++..|.+.|++|++++|+. ++. +.+...+..+-.++. ...++...+ +++|+|
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~-----~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v 70 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRG-----AHL---DALNENGLRLEDGEITVPVLAADDPAEL-GPQDLV 70 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCh-----HHH---HHHHHcCCcccCCceeecccCCCChhHc-CCCCEE
Confidence 5899999 59999999999999999999999973 222 222222332201110 001122233 689999
Q ss_pred EEcccchhhhhHHHHHHHHH
Q 021596 81 ISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~ 100 (310)
|.+..... ...+++.+.
T Consensus 71 ila~k~~~---~~~~~~~l~ 87 (304)
T PRK06522 71 ILAVKAYQ---LPAALPSLA 87 (304)
T ss_pred EEeccccc---HHHHHHHHh
Confidence 99988653 344444444
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=59.04 Aligned_cols=81 Identities=21% Similarity=0.230 Sum_probs=52.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh--------hhc-CCcEE-EEccCCCHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH--------FKN-LGVNF-VVGDVLNHESL 70 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~--------l~~-~~~~~-v~~D~~d~~~~ 70 (310)
|...|+|.|+| +|.+|+.++..|++.|++|++..++ +++.+.+.. +.. ..... ..+.+.-.+++
T Consensus 1 ~~~i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~ 74 (495)
T PRK07531 1 MTMIMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPH-----PEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASL 74 (495)
T ss_pred CCCcCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCH
Confidence 55558999998 7999999999999999999999998 333322111 000 00000 00111112345
Q ss_pred HHHhcCCCEEEEcccch
Q 021596 71 VNAIKQVDVVISTVGHA 87 (310)
Q Consensus 71 ~~~~~~~d~Vi~~a~~~ 87 (310)
.++++++|+|+-+++..
T Consensus 75 ~ea~~~aD~Vieavpe~ 91 (495)
T PRK07531 75 AEAVAGADWIQESVPER 91 (495)
T ss_pred HHHhcCCCEEEEcCcCC
Confidence 67788999999988765
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.003 Score=55.11 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=31.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
||+|.|+| +|.+|..++..|.+.|++|++++|+
T Consensus 2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecH
Confidence 58999998 7999999999999999999999986
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0022 Score=54.26 Aligned_cols=69 Identities=23% Similarity=0.255 Sum_probs=47.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|..++..|.+.|++|+++.|+ ++.. +.....+... ....+. ++++++|+||.++
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~-----~~~~---~~a~~~g~~~--~~~~~~----~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRR-----ESTC---ERAIERGLVD--EASTDL----SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHCCCcc--cccCCH----hHhcCCCEEEEcC
Confidence 5799998 8999999999999999999999997 3232 2222223211 001121 2457899999999
Q ss_pred cchh
Q 021596 85 GHAL 88 (310)
Q Consensus 85 ~~~~ 88 (310)
+...
T Consensus 66 p~~~ 69 (279)
T PRK07417 66 PIGL 69 (279)
T ss_pred CHHH
Confidence 8653
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0084 Score=44.64 Aligned_cols=101 Identities=19% Similarity=0.343 Sum_probs=66.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC--------------CCchhhHhHh-hh--cCCc--EEEEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLLDH-FK--NLGV--NFVVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~--------------~~~~~~~~~~-l~--~~~~--~~v~~D 63 (310)
.++|+|.| .|.+|+.+++.|...|. ++++++.+.=.. ...|.+.++. +. .+.+ +.+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 36899999 79999999999999996 677777652100 0222222221 21 2344 445555
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+ +.+.+.+.++++|+||.+.... .....+.+.|++.+ . .+|.
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~--~~~~~l~~~~~~~~-~-p~i~ 122 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSL--AARLLLNEICREYG-I-PFID 122 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSH--HHHHHHHHHHHHTT---EEEE
T ss_pred c-ccccccccccCCCEEEEecCCH--HHHHHHHHHHHHcC-C-CEEE
Confidence 6 5677888889999999988764 34556778899887 5 4554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0021 Score=54.77 Aligned_cols=66 Identities=26% Similarity=0.295 Sum_probs=48.7
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVG 85 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~ 85 (310)
+|.|+| .|.+|+.++..|++.|++|++..|+ +++. +.+...+... .++..++++++|+||.+.+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~-----~~~~---~~~~~~g~~~-------~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIG-----PEVA---DELLAAGAVT-------AETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHH---HHHHHCCCcc-------cCCHHHHHhcCCEEEEecC
Confidence 488998 7999999999999999999999998 4333 2333333321 1234567788999999988
Q ss_pred ch
Q 021596 86 HA 87 (310)
Q Consensus 86 ~~ 87 (310)
..
T Consensus 65 ~~ 66 (291)
T TIGR01505 65 DS 66 (291)
T ss_pred CH
Confidence 64
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0081 Score=52.87 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=52.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|.|+| .|.||+.+++.|..-|.+|.+..|+.... ......++. -..+++++++.+|+|+.+
T Consensus 192 gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~--------~~~~~~g~~-------~~~~l~ell~~aDvV~l~ 255 (385)
T PRK07574 192 GMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE--------EVEQELGLT-------YHVSFDSLVSVCDVVTIH 255 (385)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch--------hhHhhcCce-------ecCCHHHHhhcCCEEEEc
Confidence 37899999 79999999999999999999999874211 000111221 123467788889999888
Q ss_pred ccchhhhhHHHHHH
Q 021596 84 VGHALLADQVKIIA 97 (310)
Q Consensus 84 a~~~~~~~~~~~~~ 97 (310)
.+.+. .+.+++.
T Consensus 256 lPlt~--~T~~li~ 267 (385)
T PRK07574 256 CPLHP--ETEHLFD 267 (385)
T ss_pred CCCCH--HHHHHhC
Confidence 88653 4444443
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0076 Score=51.86 Aligned_cols=97 Identities=11% Similarity=0.079 Sum_probs=57.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--C-----CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--H-----PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~-----~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
+.+|.|+|++|++|+.++..|+..| . +++.++++.... -.+... ..+.+...... .+..-.....+.+++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~-~a~g~a-~Dl~~~~~~~~-~~~~i~~~~~~~~~d 79 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMK-ALEGVA-MELEDCAFPLL-AGVVATTDPEEAFKD 79 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCccc-ccchHH-HHHhhcccccc-CCcEEecChHHHhCC
Confidence 4699999999999999999999888 3 688888864210 001111 11211110000 010000112345789
Q ss_pred CCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 77 VDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
+|+|+.+||... ....+.+.+.+.+..
T Consensus 80 aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 119 (323)
T TIGR01759 80 VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA 119 (323)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999743 333456666666664
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0072 Score=51.22 Aligned_cols=84 Identities=15% Similarity=0.043 Sum_probs=53.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcC-CCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRE-STLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~-~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|++ ++|.| ||||-+|+.+++.|-++++. ++.+... .+. . +.+.-.+-++..-++.+. .|++
T Consensus 1 ~~~-~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~--g------k~i~f~g~~~~V~~l~~~-----~f~~ 65 (322)
T PRK06901 1 MAT-LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGE--E------QGIRFNNKAVEQIAPEEV-----EWAD 65 (322)
T ss_pred CCc-ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccC--C------CEEEECCEEEEEEECCcc-----Cccc
Confidence 553 68999 99999999999999999975 4444333 111 1 111112333333344332 3679
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+|++|. ++.. .++.....+.+.|
T Consensus 66 vDia~f-ag~~---~s~~~ap~a~~aG 88 (322)
T PRK06901 66 FNYVFF-AGKM---AQAEHLAQAAEAG 88 (322)
T ss_pred CCEEEE-cCHH---HHHHHHHHHHHCC
Confidence 999999 7743 5677777777777
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0098 Score=53.29 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=57.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+|+ |.+|..+++.|...| .+|+++.|+ +.+.. ..+.+ +...+ +.+++.+++.++|+||
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs-----~~ra~~la~~~---g~~~i-----~~~~l~~~l~~aDvVi 245 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRT-----YERAEDLAKEL---GGEAV-----KFEDLEEYLAEADIVI 245 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc---CCeEe-----eHHHHHHHHhhCCEEE
Confidence 368999995 999999999999999 789999998 33332 11211 22222 2346777788999999
Q ss_pred EcccchhhhhHHHHHHHHHH
Q 021596 82 STVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~ 101 (310)
.+++..........++.+..
T Consensus 246 ~aT~s~~~ii~~e~l~~~~~ 265 (417)
T TIGR01035 246 SSTGAPHPIVSKEDVERALR 265 (417)
T ss_pred ECCCCCCceEcHHHHHHHHh
Confidence 99876653344455555433
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.013 Score=51.10 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=28.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~ 37 (310)
|++|.|+|+||.||...+..+.+. .++|++++-+
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~ 36 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAG 36 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcC
Confidence 579999999999999999988765 4789888743
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0032 Score=46.07 Aligned_cols=33 Identities=33% Similarity=0.490 Sum_probs=28.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEE-cC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLV-RE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~-R~ 37 (310)
.++|.|+| +|.+|.+|.+.|.+.||.|..+. |+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs 43 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRS 43 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 47999999 59999999999999999998874 54
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.01 Score=46.26 Aligned_cols=99 Identities=14% Similarity=0.163 Sum_probs=62.5
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCC---CCCC----------CchhhHh-Hhhh--cCCcE--EEEccCCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRES---TLSA----------PSKSQLL-DHFK--NLGVN--FVVGDVLN 66 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~~~----------~~~~~~~-~~l~--~~~~~--~v~~D~~d 66 (310)
+|+|+| .|.+|+.+++.|...|. ++++++.+. ++-. ..|.+.. +.++ .+.++ .+...+ +
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~ 78 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-D 78 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-C
Confidence 589999 69999999999999996 588888774 1110 1122221 2222 23343 344444 3
Q ss_pred HHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHc-CCccEEc
Q 021596 67 HESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEA-GNVTRFF 109 (310)
Q Consensus 67 ~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~-~~v~~~v 109 (310)
.+.+.+.++++|+||.+..... .-..+.+.+.+. + ++.+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~d~~~--~r~~i~~~~~~~~~-ip~i~ 119 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFDNAE--TKAMLAESLLGNKN-KPVVC 119 (174)
T ss_pred hhhHHHHhcCCCEEEECCCCHH--HHHHHHHHHHHHCC-CCEEE
Confidence 4667788899999999966542 234466777766 5 54444
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0045 Score=55.11 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=52.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+| +|..|+.+++.|.+.|. +++++.|+ ..+...+...- .+. .....+++.+.+..+|+||+
T Consensus 181 ~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt-----~~ra~~La~~~-~~~-----~~~~~~~l~~~l~~aDiVI~ 248 (414)
T PRK13940 181 SKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRT-----IEKAQKITSAF-RNA-----SAHYLSELPQLIKKADIIIA 248 (414)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHh-cCC-----eEecHHHHHHHhccCCEEEE
Confidence 47899999 59999999999999994 79999998 44442222211 112 22334677788889999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
+++...
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 998655
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.014 Score=51.56 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=67.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCC--------------CCCchhhHh-Hhhh--cCCcEE--EEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQLL-DHFK--NLGVNF--VVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~-~~l~--~~~~~~--v~~D 63 (310)
..+|+|+| .|.+|+.++..|...|. ++++++++.-. -...|.+.+ +.+. .+.+++ +...
T Consensus 135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 36899998 68999999999999995 68888876200 001233222 2221 234443 3333
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFG 114 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~ 114 (310)
+ +.+.+.+.++++|+|+++..... .-..+-++|++.+ ++.+.-+.+|
T Consensus 214 ~-~~~~~~~~~~~~D~Vv~~~d~~~--~r~~ln~~~~~~~-ip~i~~~~~g 260 (376)
T PRK08762 214 V-TSDNVEALLQDVDVVVDGADNFP--TRYLLNDACVKLG-KPLVYGAVFR 260 (376)
T ss_pred C-ChHHHHHHHhCCCEEEECCCCHH--HHHHHHHHHHHcC-CCEEEEEecc
Confidence 4 34567778889999999988653 3344678888887 6554444433
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0039 Score=52.30 Aligned_cols=67 Identities=25% Similarity=0.356 Sum_probs=47.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC----CEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH----PTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~----~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|+|.++| .|.+|+.+++.|++.|+ +|++. .|+ +++. +.+...++... .+ ..++.+++|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~-----~~~~---~~~~~~g~~~~----~~---~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSN-----PARR---DVFQSLGVKTA----AS---NTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCC-----HHHH---HHHHHcCCEEe----CC---hHHHHhcCCE
Confidence 6799998 89999999999999998 78887 666 3333 23333455432 12 2345668999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||.+..+.
T Consensus 65 Vil~v~~~ 72 (266)
T PLN02688 65 IILAVKPQ 72 (266)
T ss_pred EEEEECcH
Confidence 99998543
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0074 Score=44.06 Aligned_cols=74 Identities=19% Similarity=0.309 Sum_probs=44.9
Q ss_pred eEEEEccCcchhHHHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcE-EEEccCCCHHHHHHHhcCCCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|.|+|++|.+|..+++.|.+. ++++.++ .|+.+.. .+. ... .+.+. .+..++ +.+.+. ..++|+||.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~--~~~---~~~-~~~~~~~~~~~~-~~~~~~--~~~~DvV~~ 71 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAG--KRV---SEA-GPHLKGEVVLEL-EPEDFE--ELAVDIVFL 71 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcC--cCH---HHH-Cccccccccccc-ccCChh--hcCCCEEEE
Confidence 5899999999999999999995 6888877 4432111 111 111 22221 212222 222232 247999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
+.+...
T Consensus 72 ~~~~~~ 77 (122)
T smart00859 72 ALPHGV 77 (122)
T ss_pred cCCcHH
Confidence 998764
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0047 Score=51.93 Aligned_cols=72 Identities=19% Similarity=0.304 Sum_probs=46.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++++|+|+ |.+|+.++..|.+.|++|+++.|+ +++.+. .+.+...+. ....++.+ ..+.++|+||+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~-----~~~~~~la~~~~~~~~-~~~~~~~~-----~~~~~~DivIn 184 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRT-----VSKAEELAERFQRYGE-IQAFSMDE-----LPLHRVDLIIN 184 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhcCc-eEEechhh-----hcccCccEEEE
Confidence 468999996 899999999999999999999998 333322 222222121 11112211 12347899999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 185 atp~g 189 (270)
T TIGR00507 185 ATSAG 189 (270)
T ss_pred CCCCC
Confidence 98864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.00091 Score=56.84 Aligned_cols=78 Identities=19% Similarity=0.199 Sum_probs=50.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh----hhcCCcEEEEc----------cCCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH----FKNLGVNFVVG----------DVLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~----l~~~~~~~v~~----------D~~d~~~ 69 (310)
+++|.|+| .|.+|..++..|++.|++|++++++. ++.+.... ....+++.-.. .+.-.++
T Consensus 1 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 1 IEKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIKQ-----EQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCCH-----HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 35899999 59999999999999999999999983 33322111 00111110000 0111124
Q ss_pred HHHHhcCCCEEEEcccch
Q 021596 70 LVNAIKQVDVVISTVGHA 87 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~ 87 (310)
+.++++++|+||.+.+..
T Consensus 75 ~~~~~~~aD~Vi~avpe~ 92 (288)
T PRK09260 75 LKAAVADADLVIEAVPEK 92 (288)
T ss_pred HHHhhcCCCEEEEeccCC
Confidence 556788999999998854
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=51.14 Aligned_cols=87 Identities=25% Similarity=0.378 Sum_probs=56.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC---HHHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN---HESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~~~~~~~--~~d~ 79 (310)
.+|||+||+|.+|+..++.+...|..+++.+.+ +++.. .+...+...+.- ..+ .+.+.++.. ++|+
T Consensus 144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s-----~~k~~---~~~~lGAd~vi~-y~~~~~~~~v~~~t~g~gvDv 214 (326)
T COG0604 144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-----SEKLE---LLKELGADHVIN-YREEDFVEQVRELTGGKGVDV 214 (326)
T ss_pred CEEEEecCCchHHHHHHHHHHHcCCcEEEEecC-----HHHHH---HHHhcCCCEEEc-CCcccHHHHHHHHcCCCCceE
Confidence 689999999999999999999999777777766 33332 333445433222 222 233444443 5999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+++.|.. .....+++.+..|
T Consensus 215 v~D~vG~~---~~~~~l~~l~~~G 235 (326)
T COG0604 215 VLDTVGGD---TFAASLAALAPGG 235 (326)
T ss_pred EEECCCHH---HHHHHHHHhccCC
Confidence 99999854 2344555665555
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0053 Score=53.10 Aligned_cols=65 Identities=20% Similarity=0.140 Sum_probs=47.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|.|+| .|.+|+.+++.|...|++|++..|+.... . ...+ . .+++.++++++|+|+.+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~--------~----~~~~-----~--~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 146 NMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKD--------L----DFLT-----Y--KDSVKEAIKDADIISLH 205 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHh--------h----hhhh-----c--cCCHHHHHhcCCEEEEe
Confidence 36899998 79999999999999999999999873211 0 0000 1 12466778889988888
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
.+...
T Consensus 206 lP~t~ 210 (330)
T PRK12480 206 VPANK 210 (330)
T ss_pred CCCcH
Confidence 87653
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0054 Score=52.67 Aligned_cols=71 Identities=27% Similarity=0.420 Sum_probs=51.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+|+ |.+|..+++.|.+.| .+|+++.|+ +.+. ...+.+ +...+ +.+++.+++.++|+||
T Consensus 178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~-----~~ra~~la~~~---g~~~~-----~~~~~~~~l~~aDvVi 243 (311)
T cd05213 178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRT-----YERAEELAKEL---GGNAV-----PLDELLELLNEADVVI 243 (311)
T ss_pred CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHc---CCeEE-----eHHHHHHHHhcCCEEE
Confidence 479999995 999999999999877 679999998 4333 222222 33222 3356777788999999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
.+++...
T Consensus 244 ~at~~~~ 250 (311)
T cd05213 244 SATGAPH 250 (311)
T ss_pred ECCCCCc
Confidence 9998764
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.016 Score=53.17 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=71.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCC-C---chhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSA-P---SKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~-~---~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.+|+|+| .|.+|++++..|+..| .+++++.-+...++ . +..+..+. ..+++.+...+..+.+++.+.|++.|.
T Consensus 130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~-~n~~v~v~~i~~~~~~dl~ev~~~~Di 207 (637)
T TIGR03693 130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEE-TDDALLVQEIDFAEDQHLHEAFEPADW 207 (637)
T ss_pred ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHH-hCCCCceEeccCCcchhHHHhhcCCcE
Confidence 5899999 8999999999999999 46777744432110 0 11111222 245777777777888999999999999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|++.+..........+-++|.+.|
T Consensus 208 Vi~vsDdy~~~~Lr~lN~acvkeg 231 (637)
T TIGR03693 208 VLYVSDNGDIDDLHALHAFCKEEG 231 (637)
T ss_pred EEEECCCCChHHHHHHHHHHHHcC
Confidence 999998766667888888888877
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0011 Score=56.34 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
+++|.|+| +|.+|..++..|.+.|++|+++.++.
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~ 36 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISD 36 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 57899998 69999999999999999999999983
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0066 Score=50.86 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=48.8
Q ss_pred EEEEccCcchhHHHHHHHHhCC----CCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 7 ILSIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|.|+||+|.+|..++..|+..| .+|+.++++...... ....++.+... ..++.. .+++.++++++|+|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~-~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG-VAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH-HHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEE
Confidence 5799998999999999999988 689999988543311 11111111111 112211 12345678899999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
+.+++..
T Consensus 75 v~t~~~~ 81 (263)
T cd00650 75 IITAGVG 81 (263)
T ss_pred EECCCCC
Confidence 9998764
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.011 Score=50.93 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=46.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.+++.|+| .|.||+++++.|..-|.+|.+.++..+... . +. -...-.+++.++++.+|+|...
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~---~---------~~----~~~~~~~~Ld~lL~~sDiv~lh 204 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRER---A---------GV----DGVVGVDSLDELLAEADILTLH 204 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhh---h---------cc----ccceecccHHHHHhhCCEEEEc
Confidence 47999999 899999999999999999999999533210 0 00 0011223456666667776666
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++.+.
T Consensus 205 ~PlT~ 209 (324)
T COG0111 205 LPLTP 209 (324)
T ss_pred CCCCc
Confidence 66553
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0046 Score=52.04 Aligned_cols=54 Identities=19% Similarity=0.367 Sum_probs=42.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|++|.+|+.++..|+++|..|+++.|+. .++.+.++++|+||++
T Consensus 159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------------~~L~~~~~~aDIvI~A 209 (283)
T PRK14192 159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------------QNLPELVKQADIIVGA 209 (283)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------------hhHHHHhccCCEEEEc
Confidence 47999999999999999999999999888887741 1234445788999998
Q ss_pred ccc
Q 021596 84 VGH 86 (310)
Q Consensus 84 a~~ 86 (310)
+|.
T Consensus 210 tG~ 212 (283)
T PRK14192 210 VGK 212 (283)
T ss_pred cCC
Confidence 863
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.018 Score=48.80 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=48.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcC----Cc-EEEEccCCCHHHHHHHhcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNL----GV-NFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~----~~-~~v~~D~~d~~~~~~~~~~~ 77 (310)
+||.|+|| |++|+.++..|+.++ .+++.++++.... .... ..+.+. +. ..+.+| .+ -+.++++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~-~G~a---~DL~~~~~~~~~~~~i~~~-~~----y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKA-EGVA---LDLSHAAAPLGSDVKITGD-GD----YEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccc-cchh---cchhhcchhccCceEEecC-CC----hhhhcCC
Confidence 58999998 999999999998887 3899999984332 1111 111111 11 222233 22 2347799
Q ss_pred CEEEEcccchh
Q 021596 78 DVVISTVGHAL 88 (310)
Q Consensus 78 d~Vi~~a~~~~ 88 (310)
|+|+.+||...
T Consensus 71 DiVvitAG~pr 81 (313)
T COG0039 71 DIVVITAGVPR 81 (313)
T ss_pred CEEEEeCCCCC
Confidence 99999998654
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.011 Score=49.77 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=51.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~~~d~V 80 (310)
+++|.|.| .|.+|+.+++.|.++|+.|.++.++.+.. ...... ..++.|. +....+..++|+|
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~-----~~~~a~--------~lgv~d~~~~~~~~~~~~~aD~V 68 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAA-----TLKAAL--------ELGVIDELTVAGLAEAAAEADLV 68 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHH-----HHHHHh--------hcCcccccccchhhhhcccCCEE
Confidence 46777777 89999999999999999998888874432 111111 1223222 1224455679999
Q ss_pred EEcccchhhhhHHHHHHHHH
Q 021596 81 ISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~ 100 (310)
|.+++.. .+..+++...
T Consensus 69 ivavPi~---~~~~~l~~l~ 85 (279)
T COG0287 69 IVAVPIE---ATEEVLKELA 85 (279)
T ss_pred EEeccHH---HHHHHHHHhc
Confidence 9999854 3444444444
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.017 Score=50.50 Aligned_cols=101 Identities=15% Similarity=0.198 Sum_probs=64.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhHh-Hhhh--cCCcE--EEEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQLL-DHFK--NLGVN--FVVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~~-~~l~--~~~~~--~v~~D 63 (310)
..+|+|+| .|.+|+.+++.|...|. ++++++.+.-..+ ..|.+.+ +.+. .+.++ .+...
T Consensus 28 ~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~ 106 (355)
T PRK05597 28 DAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR 106 (355)
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence 36899999 69999999999999994 6777777631100 1122211 1221 23444 34444
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+ +.+...+.++++|+|+.+..... .-..+-++|.+.+ ++.+.
T Consensus 107 i-~~~~~~~~~~~~DvVvd~~d~~~--~r~~~n~~c~~~~-ip~v~ 148 (355)
T PRK05597 107 L-TWSNALDELRDADVILDGSDNFD--TRHLASWAAARLG-IPHVW 148 (355)
T ss_pred c-CHHHHHHHHhCCCEEEECCCCHH--HHHHHHHHHHHcC-CCEEE
Confidence 4 34566778899999999987653 2234667888887 65444
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.01 Score=50.67 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=46.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|..-|.+|++..|+... .++... ..+++++++.+|+|+.+
T Consensus 122 gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~--------------~~~~~~------~~~l~ell~~aDiv~~~ 180 (303)
T PRK06436 122 NKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVN--------------DGISSI------YMEPEDIMKKSDFVLIS 180 (303)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcc--------------cCcccc------cCCHHHHHhhCCEEEEC
Confidence 47999999 8999999999888889999999987321 111100 12456677788888888
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
.+.+.
T Consensus 181 lp~t~ 185 (303)
T PRK06436 181 LPLTD 185 (303)
T ss_pred CCCCc
Confidence 77653
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0068 Score=51.25 Aligned_cols=77 Identities=22% Similarity=0.143 Sum_probs=50.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++++|+| +|..|+.++..|.+.|. +|+++.|+ +++.+.+.........+.. +...+++...+.++|+||+
T Consensus 125 ~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt-----~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIn 196 (282)
T TIGR01809 125 GFRGLVIG-AGGTSRAAVYALASLGVTDITVINRN-----PDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVS 196 (282)
T ss_pred CceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEE
Confidence 36899998 69999999999999995 79999998 4444322221111111111 2222344455678999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
+++...
T Consensus 197 aTp~g~ 202 (282)
T TIGR01809 197 TVPADV 202 (282)
T ss_pred CCCCCC
Confidence 988653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0073 Score=52.24 Aligned_cols=88 Identities=16% Similarity=0.210 Sum_probs=57.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEE-EEccC-CCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF-VVGDV-LNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~-v~~D~-~d~~~~~~~~~--~~d~V 80 (310)
.+|+|+||+|.+|..+++.+...|.+|++++++ +++.+.++ ..++.. +..+- .+......... ++|+|
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s-----~~~~~~~~---~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv 211 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKVAYLK---KLGFDVAFNYKTVKSLEETLKKASPDGYDCY 211 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHH---HcCCCEEEeccccccHHHHHHHhCCCCeEEE
Confidence 589999999999999999999999999998887 44544333 335432 22211 12222222222 68999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++.|.. .....++.++..|
T Consensus 212 ~d~~G~~---~~~~~~~~l~~~G 231 (325)
T TIGR02825 212 FDNVGGE---FSNTVIGQMKKFG 231 (325)
T ss_pred EECCCHH---HHHHHHHHhCcCc
Confidence 9998843 2355566666555
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0097 Score=54.50 Aligned_cols=87 Identities=20% Similarity=0.288 Sum_probs=58.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+|+ |.+|..+++.|...|. +|+++.|+ ..+...+.... .++.+.. ...+++.+++.++|+||.
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs-----~era~~La~~~-~g~~i~~---~~~~dl~~al~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRS-----EERVAALREEF-PDVEIIY---KPLDEMLACAAEADVVFT 335 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHHh-CCCceEe---ecHhhHHHHHhcCCEEEE
Confidence 478999995 9999999999999995 69999998 44443222211 1332222 233455677789999999
Q ss_pred cccchhhhhHHHHHHHHH
Q 021596 83 TVGHALLADQVKIIAAIK 100 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~ 100 (310)
+++..........++.+.
T Consensus 336 AT~s~~pvI~~e~l~~~~ 353 (519)
T PLN00203 336 STSSETPLFLKEHVEALP 353 (519)
T ss_pred ccCCCCCeeCHHHHHHhh
Confidence 987665444555555553
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0033 Score=49.89 Aligned_cols=28 Identities=18% Similarity=0.336 Sum_probs=26.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTF 32 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~ 32 (310)
|+|.|+||+|.+|+.+++.|.+.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 6899999999999999999999998774
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=50.05 Aligned_cols=96 Identities=24% Similarity=0.351 Sum_probs=58.7
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH--hcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA--IKQV 77 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~--~~~~ 77 (310)
|.++.+|.|+| +|.+|..++..+++. +.++.++.-... +.... ..-...++... ..+.+.+.+. |.++
T Consensus 1 ~m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~----es~gl-a~A~~~Gi~~~---~~~ie~LL~~~~~~dI 71 (302)
T PRK08300 1 MMSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDP----ESDGL-ARARRLGVATS---AEGIDGLLAMPEFDDI 71 (302)
T ss_pred CCCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCCh----hhHHH-HHHHHcCCCcc---cCCHHHHHhCcCCCCC
Confidence 44568999999 999999988888764 467776543321 11100 11112243222 2345555443 4579
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|+||.+++.. .+......+.++| . +++-
T Consensus 72 DiVf~AT~a~---~H~e~a~~a~eaG-k-~VID 99 (302)
T PRK08300 72 DIVFDATSAG---AHVRHAAKLREAG-I-RAID 99 (302)
T ss_pred CEEEECCCHH---HHHHHHHHHHHcC-C-eEEE
Confidence 9999999853 5667777778888 3 4443
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=51.47 Aligned_cols=88 Identities=15% Similarity=0.217 Sum_probs=57.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC---CH-HHHHHHh-cCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL---NH-ESLVNAI-KQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~---d~-~~~~~~~-~~~d~ 79 (310)
.+|+|+||+|.+|..+++.+...|.+|++++++ +++.+.++. ..++..+ .|.. +. +.+.+.. .++|+
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~-----~~~~~~~~~--~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~ 224 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS-----DEKVDLLKN--KLGFDDA-FNYKEEPDLDAALKRYFPNGIDI 224 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--hcCCcee-EEcCCcccHHHHHHHhCCCCcEE
Confidence 589999999999999999999999999998887 444433332 0344322 1221 21 2233332 27999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+++.+. ......++.++..|
T Consensus 225 v~d~~g~---~~~~~~~~~l~~~G 245 (338)
T cd08295 225 YFDNVGG---KMLDAVLLNMNLHG 245 (338)
T ss_pred EEECCCH---HHHHHHHHHhccCc
Confidence 9999884 23445566666555
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.017 Score=52.60 Aligned_cols=90 Identities=21% Similarity=0.314 Sum_probs=62.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| .|..|..+++.|.+.|++|.+.+++.... .......+...++.++.++.. ++. +.++|.|+..
T Consensus 14 ~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~~~~~-~~~----~~~~dlVV~S 84 (458)
T PRK01710 14 NKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEE---LGEVSNELKELGVKLVLGENY-LDK----LDGFDVIFKT 84 (458)
T ss_pred CCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCcc---chHHHHHHHhCCCEEEeCCCC-hHH----hccCCEEEEC
Confidence 46899999 79999999999999999999999874321 111123455668888776542 222 3678999998
Q ss_pred ccchhhhhHHHHHHHHHHcCCcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
.+.. .....+.+|++.+ ++
T Consensus 85 pgi~---~~~p~~~~a~~~~-i~ 103 (458)
T PRK01710 85 PSMR---IDSPELVKAKEEG-AY 103 (458)
T ss_pred CCCC---CCchHHHHHHHcC-Cc
Confidence 7654 2345677777766 54
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0026 Score=56.91 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+|.|+| .|++|..++..|.+.||+|+++.|+.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~ 33 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQ 33 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCH
Confidence 5799998 79999999999999999999999983
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0069 Score=51.91 Aligned_cols=84 Identities=20% Similarity=0.200 Sum_probs=51.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEc--c----CCCHHHHHHHhcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG--D----VLNHESLVNAIKQVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~--D----~~d~~~~~~~~~~~d 78 (310)
|+|+|+| +|.+|..++..|.+.|++|.++.| .+. . +.+...+..+... + ..-.++..++.+++|
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~-----~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d 70 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKR-----A---KALRERGLVIRSDHGDAVVPGPVITDPEELTGPFD 70 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHH-----H---HHHHhCCeEEEeCCCeEEecceeecCHHHccCCCC
Confidence 5899998 799999999999999999999998 321 1 2222333332211 1 000112233446899
Q ss_pred EEEEcccchhhhhHHHHHHHHHH
Q 021596 79 VVISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
+||.+..... ...+++.++.
T Consensus 71 ~vilavk~~~---~~~~~~~l~~ 90 (305)
T PRK12921 71 LVILAVKAYQ---LDAAIPDLKP 90 (305)
T ss_pred EEEEEecccC---HHHHHHHHHh
Confidence 9999887653 3334444443
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.038 Score=45.47 Aligned_cols=106 Identities=16% Similarity=0.150 Sum_probs=67.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhHh-Hhhh--cCCcEEEE--cc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQLL-DHFK--NLGVNFVV--GD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~~-~~l~--~~~~~~v~--~D 63 (310)
..+|+|.| .|.+|+.+++.|...|. ++++++.+.-..+ ..|.+.+ +.+. .+.+++.. ..
T Consensus 24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 35899999 79999999999999994 6777766531110 1122211 1221 24444433 33
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFG 114 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~ 114 (310)
+ +.+.+.+.++++|+|+.+..... ....+-++|.+.+ ++.+.-++.|
T Consensus 103 i-~~~~~~~~~~~~DlVvd~~D~~~--~r~~ln~~~~~~~-ip~v~~~~~g 149 (240)
T TIGR02355 103 L-DDAELAALIAEHDIVVDCTDNVE--VRNQLNRQCFAAK-VPLVSGAAIR 149 (240)
T ss_pred C-CHHHHHHHhhcCCEEEEcCCCHH--HHHHHHHHHHHcC-CCEEEEEecc
Confidence 3 44667788899999999987653 3445668888887 6555444443
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.017 Score=52.57 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=63.3
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVG 85 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~ 85 (310)
+|+|+| .|..|...++.|.+.|++|.+..++.... .......+...++.+..+.-.+.+.+...+.++|.|+...+
T Consensus 2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~g 77 (459)
T PRK02705 2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPE---LLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPG 77 (459)
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchh---hHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCC
Confidence 699999 68899999999999999999998874321 11112335566888877654455555666778999999777
Q ss_pred chhhhhHHHHHHHHHHcC
Q 021596 86 HALLADQVKIIAAIKEAG 103 (310)
Q Consensus 86 ~~~~~~~~~~~~aa~~~~ 103 (310)
... ...++.+|++.|
T Consensus 78 i~~---~~~~~~~a~~~~ 92 (459)
T PRK02705 78 IPW---DHPTLVELRERG 92 (459)
T ss_pred CCC---CCHHHHHHHHcC
Confidence 643 233455555544
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.028 Score=48.93 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=47.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+||.|+|+ |.+|+.++..|+..+ .++.+++.+.........++.....- ... .+.++ .|.+ .++++|+|+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~----~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA----VTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH----HhCCCCEEE
Confidence 59999995 999999999999888 36899998754331111111111000 112 22221 1222 378999999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
.++|..
T Consensus 111 itAG~~ 116 (350)
T PLN02602 111 VTAGAR 116 (350)
T ss_pred ECCCCC
Confidence 999974
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=50.52 Aligned_cols=78 Identities=21% Similarity=0.161 Sum_probs=48.7
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhcCCC
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
-.++||.|+| +|.+|+.++..++..|. +|++++++................. ...++... .|. ++++++|
T Consensus 4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~----~~l~~aD 76 (321)
T PTZ00082 4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNY----EDIAGSD 76 (321)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCH----HHhCCCC
Confidence 3467999999 69999999999999994 8999998854321111111111111 11223221 232 2578999
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
+||.+++.
T Consensus 77 iVI~tag~ 84 (321)
T PTZ00082 77 VVIVTAGL 84 (321)
T ss_pred EEEECCCC
Confidence 99999965
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0086 Score=53.80 Aligned_cols=82 Identities=23% Similarity=0.382 Sum_probs=56.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+| +|.+|..+++.|...|. +|+++.|+ +.+.. ....+ +.. ..+.+++.+.+.++|+||
T Consensus 182 ~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~-----~~ra~~la~~~---g~~-----~~~~~~~~~~l~~aDvVI 247 (423)
T PRK00045 182 GKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRT-----LERAEELAEEF---GGE-----AIPLDELPEALAEADIVI 247 (423)
T ss_pred CCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHHc---CCc-----EeeHHHHHHHhccCCEEE
Confidence 36899998 59999999999999996 79999998 43432 11221 222 223456677778999999
Q ss_pred EcccchhhhhHHHHHHHH
Q 021596 82 STVGHALLADQVKIIAAI 99 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa 99 (310)
.+++......+...++.+
T Consensus 248 ~aT~s~~~~i~~~~l~~~ 265 (423)
T PRK00045 248 SSTGAPHPIIGKGMVERA 265 (423)
T ss_pred ECCCCCCcEEcHHHHHHH
Confidence 998866533344444443
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0032 Score=56.99 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=48.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEcc------------CCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD------------VLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D------------~~d~~~ 69 (310)
||+|.|+| .|++|..++-.|.+.| ++|+++..+ +.+. +.++.....+.+-+ +.-..+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~-----~~~v---~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~ 71 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDIS-----VPRI---DAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTD 71 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECC-----HHHH---HHHHcCCCccCCCCHHHHHHHhhcCCEEEEcC
Confidence 68999998 8999999999999985 789999988 4444 33322222221111 111122
Q ss_pred HHHHhcCCCEEEEccc
Q 021596 70 LVNAIKQVDVVISTVG 85 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~ 85 (310)
+.++++++|++|.|.+
T Consensus 72 ~~~~i~~advi~I~V~ 87 (473)
T PLN02353 72 VEKHVAEADIVFVSVN 87 (473)
T ss_pred HHHHHhcCCEEEEEeC
Confidence 3456778999999886
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.013 Score=53.68 Aligned_cols=87 Identities=20% Similarity=0.270 Sum_probs=60.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| .|.+|..+++.|.++|++|+++.++.... .....+.+...++++..++-.. ...++|.||..
T Consensus 16 ~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~---~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 16 GLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDER---HRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh---hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 46899999 59999999999999999999998763211 1122345666788887765332 23579999998
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.|... ...++..|++.|
T Consensus 86 ~Gi~~---~~~~~~~a~~~g 102 (480)
T PRK01438 86 PGWRP---DAPLLAAAADAG 102 (480)
T ss_pred CCcCC---CCHHHHHHHHCC
Confidence 88653 223455555555
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.036 Score=44.15 Aligned_cols=104 Identities=24% Similarity=0.264 Sum_probs=64.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhH----hHhhhcCC--cEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQL----LDHFKNLG--VNFVVG 62 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~----~~~l~~~~--~~~v~~ 62 (310)
.++|+|.|+ |.+|+.+++.|...|. ++++++.+.-..+ ..|.+. ++++ .+. ++....
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~~ 98 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDTD 98 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEec
Confidence 368999995 5599999999999995 6777765521100 111111 2223 233 344444
Q ss_pred cCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCCC
Q 021596 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFG 114 (310)
Q Consensus 63 D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~ 114 (310)
.+.+ ...+.++++|+|+.+.... .....+-++|++.+ ++.+...+.|
T Consensus 99 ~~~~--~~~~~~~~~dvVi~~~~~~--~~~~~ln~~c~~~~-ip~i~~~~~G 145 (197)
T cd01492 99 DISE--KPEEFFSQFDVVVATELSR--AELVKINELCRKLG-VKFYATGVHG 145 (197)
T ss_pred Cccc--cHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEEEEecC
Confidence 4432 2345678999999887653 44566778889888 7655444433
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.1 Score=39.39 Aligned_cols=72 Identities=18% Similarity=0.212 Sum_probs=48.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC--C-HHH----HHHHhc--
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL--N-HES----LVNAIK-- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~--d-~~~----~~~~~~-- 75 (310)
.+|+|.||-|-+|+++++.+.+++|-|--++...... ...-.+|.+|-. . .++ +.+.+.
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge 71 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGE 71 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence 6899999999999999999999999887766653221 112233444322 2 122 223333
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|.||+.||.+.
T Consensus 72 kvDav~CVAGGWA 84 (236)
T KOG4022|consen 72 KVDAVFCVAGGWA 84 (236)
T ss_pred ccceEEEeecccc
Confidence 6999999998764
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0065 Score=52.14 Aligned_cols=73 Identities=26% Similarity=0.309 Sum_probs=49.3
Q ss_pred CCC--CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 1 MAS--KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 1 M~~--~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|+. +++|+|+| .|.+|..++..|.+.|+ +|++++|+ +++.+ .....++..... .+..+++++
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~-----~~~~~---~a~~~g~~~~~~-----~~~~~~~~~ 66 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRS-----AETRA---RARELGLGDRVT-----TSAAEAVKG 66 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECC-----HHHHH---HHHhCCCCceec-----CCHHHHhcC
Confidence 554 36899998 89999999999999984 79999987 33332 222223211111 123445678
Q ss_pred CCEEEEcccch
Q 021596 77 VDVVISTVGHA 87 (310)
Q Consensus 77 ~d~Vi~~a~~~ 87 (310)
+|+||.+++..
T Consensus 67 aDvViiavp~~ 77 (307)
T PRK07502 67 ADLVILCVPVG 77 (307)
T ss_pred CCEEEECCCHH
Confidence 99999999864
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0046 Score=52.32 Aligned_cols=72 Identities=15% Similarity=0.275 Sum_probs=48.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-Hhhhc--CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKN--LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.++|+|+| +|..|++++..|.+.|. +|+++.|+ ..+.+.+ +.+.. +...+.. + +++.+.+.++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~-----~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVD-----PARAAALADELNARFPAARATA--G---SDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCE
Confidence 36899999 58899999999999996 79999998 3344332 22221 1122221 1 233445678999
Q ss_pred EEEcccc
Q 021596 80 VISTVGH 86 (310)
Q Consensus 80 Vi~~a~~ 86 (310)
||++++.
T Consensus 196 VInaTp~ 202 (284)
T PRK12549 196 LVHATPT 202 (284)
T ss_pred EEECCcC
Confidence 9999754
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0064 Score=48.60 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=44.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~ 82 (310)
.|+|+|+| .|.+|+++++.|.+.|++|++.+++ +.+...... ..+.+.+.. + +++. ++|+++.
T Consensus 28 gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~-----~~~~~~~~~--~~g~~~v~~-----~---~l~~~~~Dv~vp 91 (200)
T cd01075 28 GKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADIN-----EEAVARAAE--LFGATVVAP-----E---EIYSVDADVFAP 91 (200)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHH--HcCCEEEcc-----h---hhccccCCEEEe
Confidence 37899999 5899999999999999999988877 323221111 113333321 2 2333 7999998
Q ss_pred cccc
Q 021596 83 TVGH 86 (310)
Q Consensus 83 ~a~~ 86 (310)
++..
T Consensus 92 ~A~~ 95 (200)
T cd01075 92 CALG 95 (200)
T ss_pred cccc
Confidence 7753
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.015 Score=49.98 Aligned_cols=63 Identities=21% Similarity=0.167 Sum_probs=45.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.+++.|+| .|.||+.+++.+..-|.+|.+..|..... ..++. ..+++++++.+|+|+.+
T Consensus 145 gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~------------~~~~~--------~~~l~ell~~sDvv~lh 203 (311)
T PRK08410 145 GKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK------------NEEYE--------RVSLEELLKTSDIISIH 203 (311)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc------------ccCce--------eecHHHHhhcCCEEEEe
Confidence 47999999 89999999999998889999998863211 01111 22566777777877776
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++.+
T Consensus 204 ~Plt 207 (311)
T PRK08410 204 APLN 207 (311)
T ss_pred CCCC
Confidence 6654
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0058 Score=51.38 Aligned_cols=69 Identities=16% Similarity=0.238 Sum_probs=47.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC----CEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH----PTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|+ ++|.++| +|.+|.++++.|++.|+ +|++..|+ +++. +.+. ..+++.. .+. .++++
T Consensus 1 ~~--~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~-----~~~~---~~l~~~~g~~~~----~~~---~e~~~ 62 (272)
T PRK12491 1 MN--KQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLN-----VSNL---KNASDKYGITIT----TNN---NEVAN 62 (272)
T ss_pred CC--CeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCC-----HHHH---HHHHHhcCcEEe----CCc---HHHHh
Confidence 56 7899999 89999999999999884 58888876 3333 2222 2344321 122 23456
Q ss_pred CCCEEEEcccch
Q 021596 76 QVDVVISTVGHA 87 (310)
Q Consensus 76 ~~d~Vi~~a~~~ 87 (310)
++|+||.+..+.
T Consensus 63 ~aDiIiLavkP~ 74 (272)
T PRK12491 63 SADILILSIKPD 74 (272)
T ss_pred hCCEEEEEeChH
Confidence 899999998864
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.025 Score=43.27 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=53.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|.| .|.+|.+.++.|++.|++|++++... .+.+..+ ..+++....+...+ ++++|.||.+
T Consensus 13 ~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~-------~~~l~~l--~~i~~~~~~~~~~d-----l~~a~lViaa 77 (157)
T PRK06719 13 NKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEI-------CKEMKEL--PYITWKQKTFSNDD-----IKDAHLIYAA 77 (157)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCcc-------CHHHHhc--cCcEEEecccChhc-----CCCceEEEEC
Confidence 46899999 59999999999999999999884321 1111222 24455544443322 5688999988
Q ss_pred ccchhhhhHHHHHHHHHHc
Q 021596 84 VGHALLADQVKIIAAIKEA 102 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~ 102 (310)
+.... ....+...|++.
T Consensus 78 T~d~e--~N~~i~~~a~~~ 94 (157)
T PRK06719 78 TNQHA--VNMMVKQAAHDF 94 (157)
T ss_pred CCCHH--HHHHHHHHHHHC
Confidence 76543 334455566553
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.016 Score=49.35 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=29.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.++| .|.+|..+++.|++.|++|.+..|+
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~~v~v~~~~ 32 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGHQLHVTTIG 32 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4799998 8999999999999999999988887
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.042 Score=45.45 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=64.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCC--------------CchhhHh-Hhhh--cCCc--EEEEcc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSA--------------PSKSQLL-DHFK--NLGV--NFVVGD 63 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~--------------~~~~~~~-~~l~--~~~~--~~v~~D 63 (310)
..+|+|+|+ |.+|+.+++.|...|. ++++++.+.-..+ ..|.+.+ +.+. .+.+ +.+...
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 468999995 9999999999999994 6777766531110 1122221 1222 2344 344444
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+ +.+.+.+.++++|+||.+..... .-..+-++|++.+ ++ +|.
T Consensus 111 i-~~~~~~~~~~~~DiVi~~~D~~~--~r~~ln~~~~~~~-ip-~v~ 152 (245)
T PRK05690 111 L-DDDELAALIAGHDLVLDCTDNVA--TRNQLNRACFAAK-KP-LVS 152 (245)
T ss_pred C-CHHHHHHHHhcCCEEEecCCCHH--HHHHHHHHHHHhC-CE-EEE
Confidence 4 35567778899999999987553 3445778888887 54 444
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.022 Score=46.66 Aligned_cols=103 Identities=18% Similarity=0.284 Sum_probs=64.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC------------C--C-chhhH----hHhhhcCCc--EEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS------------A--P-SKSQL----LDHFKNLGV--NFVV 61 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~------------~--~-~~~~~----~~~l~~~~~--~~v~ 61 (310)
..+|+|+| .|.+|+.+++.|...|. ++++++.+.-.. + . .|... +..+ .+.+ +.+.
T Consensus 27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~~ 104 (231)
T PRK08328 27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETFV 104 (231)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEEe
Confidence 35899999 79999999999999994 677776542110 0 0 12212 1222 2344 3344
Q ss_pred ccCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 62 ~D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
..+ +.+.+.+.++++|+|+.+..... ....+-++|++.+ ++.+.-+.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~~~--~r~~l~~~~~~~~-ip~i~g~~ 151 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDNFE--TRYLLDDYAHKKG-IPLVHGAV 151 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCHH--HHHHHHHHHHHcC-CCEEEEee
Confidence 444 45667778899999999987642 3344557788887 55443333
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0058 Score=52.45 Aligned_cols=83 Identities=12% Similarity=0.148 Sum_probs=51.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh---hHhHhhhcCCcE--EEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS---QLLDHFKNLGVN--FVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~l~~~~~~--~v~~D~~d~~~~~~~~~~~d 78 (310)
.++|.|+| +|-+|+.++..|+..|++|+++++++......+. ..+..+...+.. .....+.-..+++++++++|
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 37899999 6999999999999999999999998422100000 001111111110 00011111234667889999
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
.|+-+++-.
T Consensus 86 lViEavpE~ 94 (321)
T PRK07066 86 FIQESAPER 94 (321)
T ss_pred EEEECCcCC
Confidence 999998755
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0077 Score=51.15 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=53.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| -|.+|+++++.|...|++|++..|.... . ......++++ .++.++++.+|+|+.+
T Consensus 16 gKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s--~------~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 16 GKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKS--F------EVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchh--h------HHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 47999999 8999999999999999999988775221 1 1112234432 1466788899999999
Q ss_pred ccchhhhhHHHHHH
Q 021596 84 VGHALLADQVKIIA 97 (310)
Q Consensus 84 a~~~~~~~~~~~~~ 97 (310)
.+.. .+.+++.
T Consensus 79 LPd~---~t~~V~~ 89 (335)
T PRK13403 79 LPDE---QQAHVYK 89 (335)
T ss_pred CCCh---HHHHHHH
Confidence 8853 3456654
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.016 Score=49.66 Aligned_cols=74 Identities=14% Similarity=0.108 Sum_probs=48.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcC-----CcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNL-----GVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~~~~~~~~ 76 (310)
.+||.|+|+ |.+|+.++..|+..| .++++++++...... ....+.+. ...+... .|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g----~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKG----EAMDLQHGSAFLKNPKIEAD--KDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHH----HHHHHHHhhccCCCCEEEEC--CCHH----HhCC
Confidence 369999995 999999999999888 478999887543211 11122221 1223321 2332 2789
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.++|...
T Consensus 72 adivvitaG~~~ 83 (312)
T cd05293 72 SKVVIVTAGARQ 83 (312)
T ss_pred CCEEEECCCCCC
Confidence 999999998643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.018 Score=52.14 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=45.1
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGH 86 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~~ 86 (310)
|.|+| .|..|..+++.|+++|++|++..|+ +++.+.+......+..+. ...+.+++.+.++++|+|+.+++.
T Consensus 2 IG~IG-LG~MG~~mA~nL~~~G~~V~v~drt-----~~~~~~l~~~~~~g~~~~--~~~s~~e~v~~l~~~dvIil~v~~ 73 (467)
T TIGR00873 2 IGVIG-LAVMGSNLALNMADHGFTVSVYNRT-----PEKTDEFLAEHAKGKKIV--GAYSIEEFVQSLERPRKIMLMVKA 73 (467)
T ss_pred EEEEe-eHHHHHHHHHHHHhcCCeEEEEeCC-----HHHHHHHHhhccCCCCce--ecCCHHHHHhhcCCCCEEEEECCC
Confidence 77888 8999999999999999999999998 434322221101110011 123445555555566766666544
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.024 Score=45.76 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=64.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCC---CCCC----------CchhhHh-Hhhh--cCCc--EEEEccC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRES---TLSA----------PSKSQLL-DHFK--NLGV--NFVVGDV 64 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~~~----------~~~~~~~-~~l~--~~~~--~~v~~D~ 64 (310)
..+|+|+| .|.+|+.+++.|...|. ++++++.+. ++-. ..|.+.. +.+. .+.+ +.+...+
T Consensus 28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 36899999 69999999999999995 588887762 1110 1122221 1221 2344 3344445
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHc-CCccEEc
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEA-GNVTRFF 109 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~-~~v~~~v 109 (310)
. .+.+.+.++++|+||.+..... ....+.+.|.+. + ++.+.
T Consensus 107 ~-~~~~~~~~~~~DvVI~a~D~~~--~r~~l~~~~~~~~~-~p~I~ 148 (212)
T PRK08644 107 D-EDNIEELFKDCDIVVEAFDNAE--TKAMLVETVLEHPG-KKLVA 148 (212)
T ss_pred C-HHHHHHHHcCCCEEEECCCCHH--HHHHHHHHHHHhCC-CCEEE
Confidence 3 4566778899999999966543 344567888887 6 44443
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0063 Score=52.75 Aligned_cols=67 Identities=22% Similarity=0.229 Sum_probs=48.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|...|.+|.++.|+... .. ....++. ..++.++++.+|+|+.+
T Consensus 150 gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~-----~~----~~~~~~~--------~~~l~ell~~aDiV~l~ 211 (333)
T PRK13243 150 GKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKP-----EA----EKELGAE--------YRPLEELLRESDFVSLH 211 (333)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCCh-----hh----HHHcCCE--------ecCHHHHHhhCCEEEEe
Confidence 47999999 7999999999999999999999887321 10 0011221 12466778889999988
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++...
T Consensus 212 lP~t~ 216 (333)
T PRK13243 212 VPLTK 216 (333)
T ss_pred CCCCh
Confidence 87653
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.021 Score=49.77 Aligned_cols=89 Identities=22% Similarity=0.272 Sum_probs=57.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEE-EEccCCC-HHHHHHHh-cCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNF-VVGDVLN-HESLVNAI-KQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~-v~~D~~d-~~~~~~~~-~~~d~V 80 (310)
.+|+|+||+|.+|..+++.+...|. +|++++++ +++.+.+.. ..++.. +..+-.+ .+.+.++. .++|+|
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s-----~~~~~~~~~--~lGa~~vi~~~~~~~~~~i~~~~~~gvd~v 228 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGS-----DEKCQLLKS--ELGFDAAINYKTDNVAERLRELCPEGVDVY 228 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCC-----HHHHHHHHH--hcCCcEEEECCCCCHHHHHHHHCCCCceEE
Confidence 5899999999999999999999998 79998887 444433222 134432 2221112 22333332 269999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++++.. .....++.++..|
T Consensus 229 id~~g~~---~~~~~~~~l~~~G 248 (345)
T cd08293 229 FDNVGGE---ISDTVISQMNENS 248 (345)
T ss_pred EECCCcH---HHHHHHHHhccCC
Confidence 9998853 2345566666655
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0098 Score=50.22 Aligned_cols=76 Identities=24% Similarity=0.359 Sum_probs=48.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHh-hhc-CCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDH-FKN-LGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++++|+| +|..|++++-.|.+.|. +|+++.|+ .++.+.+.. +.. .+...+.. .+...+...+..+|+|
T Consensus 127 ~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~-----~~ka~~La~~~~~~~~~~~~~~--~~~~~~~~~~~~~div 198 (283)
T PRK14027 127 LDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVG--VDARGIEDVIAAADGV 198 (283)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHhhccCcceEEe--cCHhHHHHHHhhcCEE
Confidence 36899999 59999999999999995 78999998 444433322 211 11111111 1222333345678999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|++.+..
T Consensus 199 INaTp~G 205 (283)
T PRK14027 199 VNATPMG 205 (283)
T ss_pred EEcCCCC
Confidence 9988754
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.014 Score=51.95 Aligned_cols=71 Identities=17% Similarity=0.318 Sum_probs=54.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|+|+|+| +|..|..++..+.+.|++|++++.++... .. .+ .-..+..|..|.+.+.++.+ ++|.|+
T Consensus 12 ~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~--~~-----~~---ad~~~~~~~~d~~~l~~~~~~~~id~vi 80 (395)
T PRK09288 12 ATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAP--AM-----QV---AHRSHVIDMLDGDALRAVIEREKPDYIV 80 (395)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCc--hH-----Hh---hhheEECCCCCHHHHHHHHHHhCCCEEE
Confidence 57999998 58999999999999999999998874322 00 01 11356778889999988888 899998
Q ss_pred Eccc
Q 021596 82 STVG 85 (310)
Q Consensus 82 ~~a~ 85 (310)
....
T Consensus 81 ~~~e 84 (395)
T PRK09288 81 PEIE 84 (395)
T ss_pred EeeC
Confidence 7544
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.015 Score=47.72 Aligned_cols=92 Identities=21% Similarity=0.184 Sum_probs=56.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCE---EEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPT---FVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V---~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+-+|.|+||.|.||+.|.-.|. ....| ...+-.... . ....+.+-+-......+.-.+.++++++++|+|
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~---G---VaaDlSHI~T~s~V~g~~g~~~L~~al~~advV 100 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTP---G---VAADLSHINTNSSVVGFTGADGLENALKGADVV 100 (345)
T ss_pred cceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCC---c---ccccccccCCCCceeccCChhHHHHHhcCCCEE
Confidence 4589999999999999966554 44433 333222111 0 112222222222334455577999999999999
Q ss_pred EEcccchh-------------hhhHHHHHHHHHHc
Q 021596 81 ISTVGHAL-------------LADQVKIIAAIKEA 102 (310)
Q Consensus 81 i~~a~~~~-------------~~~~~~~~~aa~~~ 102 (310)
+--||... ....+++..++.++
T Consensus 101 vIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~ 135 (345)
T KOG1494|consen 101 VIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC 135 (345)
T ss_pred EecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh
Confidence 99998754 22345666666665
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.018 Score=50.66 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=51.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+..|+.... +.....++.. .++++++++.+|+|+.+
T Consensus 199 gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~--------~~~~~~g~~~-------~~~l~ell~~sDvV~l~ 262 (386)
T PLN03139 199 GKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDP--------ELEKETGAKF-------EEDLDAMLPKCDVVVIN 262 (386)
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcch--------hhHhhcCcee-------cCCHHHHHhhCCEEEEe
Confidence 47999999 79999999999999999999988873211 1111112221 23466777889999888
Q ss_pred ccchhhhhHHHHH
Q 021596 84 VGHALLADQVKII 96 (310)
Q Consensus 84 a~~~~~~~~~~~~ 96 (310)
.+.+. .+.+++
T Consensus 263 lPlt~--~T~~li 273 (386)
T PLN03139 263 TPLTE--KTRGMF 273 (386)
T ss_pred CCCCH--HHHHHh
Confidence 87653 444444
|
|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.068 Score=44.73 Aligned_cols=31 Identities=32% Similarity=0.417 Sum_probs=27.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL 34 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~ 34 (310)
..+|+|.|++|..|+.+++.+.+.+.++++.
T Consensus 11 ~i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~ 41 (286)
T PLN02775 11 AIPIMVNGCTGKMGHAVAEAAVSAGLQLVPV 41 (286)
T ss_pred CCeEEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 4699999999999999999999988887764
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0061 Score=51.69 Aligned_cols=38 Identities=24% Similarity=0.399 Sum_probs=33.2
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
|+. +++|.|+| +|.+|..++..|+..|++|+++++++.
T Consensus 1 ~~~~~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~ 39 (286)
T PRK07819 1 MSDAIQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEE 39 (286)
T ss_pred CCCCccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 444 56899999 599999999999999999999999943
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.031 Score=50.04 Aligned_cols=92 Identities=10% Similarity=-0.058 Sum_probs=56.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-------CC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEE-EccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-------GH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFV-VGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-------g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~~~~~ 73 (310)
.-+|.|+|++|.+|.+++..|+.. +. ++..+.++.+.......++.........++. .. .+. +.
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~--~~y----e~ 173 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI--DPY----EV 173 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec--CCH----HH
Confidence 348999999999999999999988 63 6888888855432211111111101111211 12 232 34
Q ss_pred hcCCCEEEEcccchh-------------hhhHHHHHHHHHH
Q 021596 74 IKQVDVVISTVGHAL-------------LADQVKIIAAIKE 101 (310)
Q Consensus 74 ~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~ 101 (310)
++++|+||.++|... ....+.+.++..+
T Consensus 174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999743 3334556666666
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0078 Score=50.79 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=31.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++|+|+|.+|.+|+.++..|+++|++|+++.|+
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~ 192 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR 192 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence 4799999999999999999999999999999776
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.056 Score=37.61 Aligned_cols=81 Identities=21% Similarity=0.193 Sum_probs=58.7
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEccc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVG 85 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~ 85 (310)
+|||+||-...-..+-+.+.+.|.+.....|... +-.....+...++++|.||....
T Consensus 1 ~vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-----------------------~~~~~~~l~~~i~~aD~VIv~t~ 57 (97)
T PF10087_consen 1 SVLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-----------------------DEKKASRLPSKIKKADLVIVFTD 57 (97)
T ss_pred CEEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-----------------------CccchhHHHHhcCCCCEEEEEeC
Confidence 5899998667777888888889988777744421 11233357778889999999988
Q ss_pred chhhhhHHHHHHHHHHcCCccEEcc
Q 021596 86 HALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 86 ~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
...-.....+-+.|++.+ ++-++.
T Consensus 58 ~vsH~~~~~vk~~akk~~-ip~~~~ 81 (97)
T PF10087_consen 58 YVSHNAMWKVKKAAKKYG-IPIIYS 81 (97)
T ss_pred CcChHHHHHHHHHHHHcC-CcEEEE
Confidence 776566778888999887 544433
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.011 Score=49.65 Aligned_cols=56 Identities=20% Similarity=0.348 Sum_probs=46.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+++.+|+.++..|+++|..|+++.++. ..+.+.++.+|+||.+
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------------~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------------KDMASYLKDADVIVSA 208 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------------hhHHHHHhhCCEEEEC
Confidence 47999999999999999999999999999888751 1355667788999998
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
+|...
T Consensus 209 vg~p~ 213 (286)
T PRK14175 209 VGKPG 213 (286)
T ss_pred CCCCc
Confidence 87653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 310 | ||||
| 1qyc_A | 308 | Crystal Structures Of Pinoresinol-Lariciresinol And | 1e-111 | ||
| 2gas_A | 307 | Crystal Structure Of Isoflavone Reductase Length = | 6e-97 | ||
| 1qyd_A | 313 | Crystal Structures Of Pinoresinol-Lariciresinol And | 8e-80 | ||
| 3c1o_A | 321 | The Multiple Phenylpropene Synthases In Both Clarki | 9e-70 | ||
| 2qw8_A | 314 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-63 | ||
| 2qx7_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-63 | ||
| 2r2g_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 3e-63 | ||
| 3c3x_A | 318 | The Multiple Phenylpropene Synthases In Both Clarki | 7e-63 | ||
| 3i52_A | 346 | Ternary Complex Structure Of Leucoanthocyanidin Red | 3e-60 |
| >pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308 | Back alignment and structure |
|
| >pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307 | Back alignment and structure |
|
| >pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313 | Back alignment and structure |
|
| >pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321 | Back alignment and structure |
|
| >pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314 | Back alignment and structure |
|
| >pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318 | Back alignment and structure |
|
| >pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318 | Back alignment and structure |
|
| >pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318 | Back alignment and structure |
|
| >pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 368 bits (945), Expect = e-128
Identities = 175/310 (56%), Positives = 235/310 (75%), Gaps = 5/310 (1%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA--PSKSQLLDHFKNLGVNFV 60
+++KIL +G TG IG+ IV AS+KAG+PT+ LVR++ +A +K +L+D++++LGV +
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
GD+ +HE+LV AIKQVD+VI G L+ DQVKII AIKEAGNV +FFPSEFG DVDR
Sbjct: 61 EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR- 119
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
H AVEP + V+ + KA IRR +EAEG+PYTY+ + F GYFL NL Q A PPRDKVVI
Sbjct: 120 HDAVEPVRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVI 178
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
LGDGN K Y E D+ T+TI+A +DP TLNK ++I+ P N + N++++LWE+KIGKTL
Sbjct: 179 LGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTL 238
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
E+ YVSEEQ+LK+IQE++ P N +L++YHS + G +EI+P+ +EAS+ +PDV YT
Sbjct: 239 EKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYT 297
Query: 301 TVDEYLNQFV 310
T DEYLNQFV
Sbjct: 298 TADEYLNQFV 307
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 366 bits (941), Expect = e-128
Identities = 200/311 (64%), Positives = 241/311 (77%), Gaps = 4/311 (1%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSKSQLLDHFKNLGVNF 59
M S+S+IL IG TGYIG+ + +AS+ GHPTF+LVREST S+ K+QLL+ FK G N
Sbjct: 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
V G + +H SLV A+K VDVVISTVG + QV II AIKE G V RFFPSEFGNDVD
Sbjct: 61 VHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 120
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV 179
H AVEPAKSV+ +VKA++RRA+EAEGIPYTYV S CF GYFL +L Q G APPRDKVV
Sbjct: 121 VH-AVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVV 178
Query: 180 ILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239
ILGDGN + V+ KE+DI T+TIKAVDDPRTLNK LY++ P N S N+LV+LWE+KI KT
Sbjct: 179 ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 238
Query: 240 LEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKY 299
LE+ YV EE++LK I + P N+ ++I HS+F+ G QTNFEI P+ GVEASQL+PDVKY
Sbjct: 239 LEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPDVKY 297
Query: 300 TTVDEYLNQFV 310
TTVDEYL+ FV
Sbjct: 298 TTVDEYLSNFV 308
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 361 bits (929), Expect = e-126
Identities = 143/315 (45%), Positives = 209/315 (66%), Gaps = 7/315 (2%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M KS++L +GGTGYIGK IV AS+ GHPT+VL R +S K Q+L +FK LG +
Sbjct: 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHAL----LADQVKIIAAIKEAGNVTRFFPSEFGND 116
+ +H+ LV+A+KQVDVVIS + + + +Q+K++ AIKEAGN+ RF PSEFG D
Sbjct: 61 EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120
Query: 117 VDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ-PGAAAPPR 175
D A++P + K ++RRA+EA IPYTYV S F GYF +L Q G PPR
Sbjct: 121 PDIMEHALQPGSITF-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR 179
Query: 176 DKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERK 235
DKV+I GDGN K ++ EDD+ TYTIK++DDP+TLNK +YI+PP NI S +++ +WER
Sbjct: 180 DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 239
Query: 236 IGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFP 295
+ L++ Y+S + L ++++ + + ++ + +F G NFEI P+ +EA++L+P
Sbjct: 240 SEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYP 298
Query: 296 DVKYTTVDEYLNQFV 310
+VKY T+D YL ++V
Sbjct: 299 EVKYVTMDSYLERYV 313
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 357 bits (917), Expect = e-124
Identities = 119/311 (38%), Positives = 185/311 (59%), Gaps = 5/311 (1%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV 61
+ K ++L G TG+IG+F+ AS+ A PT++L R S PSK+++ ++ G V
Sbjct: 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVY 66
Query: 62 GDVLNHESLVNAIKQ--VDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
G + E++ +K+ +D+V+STVG + DQ+ ++ A+K G + RF PSEFG+DV+R
Sbjct: 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNR 126
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV 179
A VEP ++Y K R+R+ VE GIP+TY+ + N + P PP D
Sbjct: 127 AD-PVEPGLNMY-REKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQ 184
Query: 180 ILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239
I GDGN KA + DI +T+K VDD RTLNK+++ +P N + N+L S+WE+KIG+T
Sbjct: 185 IYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRT 244
Query: 240 LEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKY 299
L R V+E+ LL E PQ+V+ + H +F+ G Q NF I+ VE + L+P+ +
Sbjct: 245 LPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSF 304
Query: 300 TTVDEYLNQFV 310
TV+E +++
Sbjct: 305 RTVEECFGEYI 315
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 353 bits (906), Expect = e-122
Identities = 134/310 (43%), Positives = 198/310 (63%), Gaps = 4/310 (1%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQLLDHFKNLGVNFV 60
+ KI+ GGTGYIGKF+V AS+ HPTF+ R + S PS QL + F+++GV +
Sbjct: 2 SHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII 61
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
G++ HE +V+ +KQVD+VIS + +++ Q+ II AIK AGN+ RF PS+FG + DR
Sbjct: 62 EGEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRI 121
Query: 121 HGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI 180
+ P +SV + K IRRA+EA +PYTYV + CF YF+ LL P D +VI
Sbjct: 122 K-PLPPFESVL-EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVI 179
Query: 181 LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240
G G K V N E+DIA YTIK DPR N+ + +PP NI S N+L+SLWE K G +
Sbjct: 180 YGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSF 239
Query: 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYT 300
++ ++ +EQL++ QE PQN+ +SI HS+F+ G ++E+ +EAS L+P++++T
Sbjct: 240 KKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKD-DIEASNLYPELEFT 298
Query: 301 TVDEYLNQFV 310
++D L+ F+
Sbjct: 299 SIDGLLDLFI 308
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 341 bits (875), Expect = e-118
Identities = 133/309 (43%), Positives = 193/309 (62%), Gaps = 10/309 (3%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV 61
KSKIL GGTGYIG +V+ S+K GHPT+V R + SK+ LLD F++LG V
Sbjct: 9 GMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPN----SSKTTLLDEFQSLGAIIVK 64
Query: 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAH 121
G++ HE LV +K+VDVVIS + + DQ KI+ AIK AGN+ RF PS+FG + DR +
Sbjct: 65 GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN 124
Query: 122 GAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL 181
P + K IRRA+E IPYTYV + CF YF+ LL+P P+D++ +
Sbjct: 125 AL--PPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEITVY 179
Query: 182 GDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241
G G K N E DI YTIK DPR LN+ + +P NI + +L+S WE+KIGK +
Sbjct: 180 GTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239
Query: 242 REYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTT 301
+ +V EE+++ +E P+N+ ++I H +F++G +++ + + VEAS L+P++K+TT
Sbjct: 240 KIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTT 298
Query: 302 VDEYLNQFV 310
+DE L+ FV
Sbjct: 299 IDELLDIFV 307
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 5e-28
Identities = 48/227 (21%), Positives = 80/227 (35%), Gaps = 37/227 (16%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA K KI G TG G + +V+AG+ VLVR+ S+ L + V
Sbjct: 1 MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD-----SSR---LPSEGPRPAHVV 51
Query: 61 VGDVLNHESLVNAIKQVDVVISTVG-------HALLADQVK-IIAAIKEAGNVTRF-FPS 111
VGDVL + + D VI +G ++++ + I+AA+K G V + +
Sbjct: 52 VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACT 110
Query: 112 EFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGA- 170
D V P D R+ + + G+ Y V P
Sbjct: 111 SAFLLWDPTK--VPPRLQAVTDDHIRMHKVLRESGLKYVAV--------------MPPHI 154
Query: 171 -AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216
P + DG + + D+ + ++ + + Y
Sbjct: 155 GDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-21
Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 41/221 (18%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
++L +G G + ++++ GH +VR ++ Q + + + VV ++
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVR-------NEEQGPELRERGASDIVVANL- 74
Query: 66 NHESLVNAIKQVDVVISTVGHALLAD-----------QVKIIAAIKEAGNVTRF-FPSEF 113
E +A +D V+ G +K I ++ G + RF S
Sbjct: 75 -EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSV 132
Query: 114 GNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGA--A 171
G Y K ++ + YT +++PG
Sbjct: 133 G--TVD-PDQGPMNMRHYLVAKRLADDELKRSSLDYT--------------IVRPGPLSN 175
Query: 172 APPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212
KV + + D+A + VD T+ K
Sbjct: 176 EESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGK 216
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 1e-20
Identities = 48/319 (15%), Positives = 101/319 (31%), Gaps = 43/319 (13%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKNLGVNF 59
M K ++ GGTG G + ++ G V+ R + +K + G
Sbjct: 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKKAAK-----ELRLQGAEV 55
Query: 60 VVGDVLNHESLVNAIKQVDVVIS------TVGHALLADQVK-IIAAIKEAGNVTRFFPSE 112
V GD + + A+ + Q K + + G + S
Sbjct: 56 VQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSG 114
Query: 113 FGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA 172
N + + + ++D K + G+P T V + NLL
Sbjct: 115 LEN-IKKLTA--GRLAAAHFDGKGEVEEYFRDIGVPMTSVRL----PCYFENLLSHFLPQ 167
Query: 173 PPRDK---VVILGDGNPKAVYNKEDDIATYTIKAVDDP-RTLNKNLYIQPPGNIYSFNDL 228
D ++ L G+ D+ + + P + + +N+ + ++ +
Sbjct: 168 KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL--STCRHTAEEY 225
Query: 229 VSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGV 288
+L + K + ++ E K A + + + + P +
Sbjct: 226 AALLTKHTRKVVHDAKMTPEDYEKLGFPGARD------------LANMFRFYALRPDRDI 273
Query: 289 EAS-QLFPDVKYTTVDEYL 306
E + +L P T+D++L
Sbjct: 274 ELTLRLNPKA--LTLDQWL 290
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 3e-20
Identities = 45/210 (21%), Positives = 75/210 (35%), Gaps = 31/210 (14%)
Query: 6 KILSIGGTGYIGKFIV-EASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
+L +G G I + ++ + + K + R+ P+K ++GDV
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQ-----PAKIHKPYP---TNSQIIMGDV 76
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVK-IIAAIKEAGNVTRF-FPSEFGNDVDRAHG 122
LNH +L A++ D+V + + L Q +IAA+K V R F G +
Sbjct: 77 LNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGK 135
Query: 123 AVEPAKSV---YYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPG--AAAPPRDK 177
VE +V R A+EA G+ YT +L+P D
Sbjct: 136 FVEWNNAVIGEPLKPFRRAADAIEASGLEYT--------------ILRPAWLTDEDIIDY 181
Query: 178 VVILGDGNPKAVYNKEDDIATYTIKAVDDP 207
+ + K +A +D P
Sbjct: 182 ELTSRNEPFKGTIVSRKSVAALITDIIDKP 211
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 8e-19
Identities = 45/270 (16%), Positives = 80/270 (29%), Gaps = 52/270 (19%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKNLGVNF 59
A+ +L G +G G+ + + + LVR + + +
Sbjct: 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKEKIGG----EADV 52
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVGHALLAD---------------------------- 91
+GD+ + +S+ A + +D ++
Sbjct: 53 FIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112
Query: 92 QVKIIAAIKEAGNVTRF-FPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYT 150
Q I A K AG V G + H + K + + + G PYT
Sbjct: 113 QKNQIDAAKVAG-VKHIVVVGSMGGT-NPDHPLNKLGNGNILVWKRKAEQYLADSGTPYT 170
Query: 151 YVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210
+ G L G K L + K V D+A I+A+
Sbjct: 171 IIR----AGGLLDKE--GGVRELLVGKDDELLQTDTKTVP--RADVAEVCIQALLFEEAK 222
Query: 211 NK--NLYIQPPGNIYSFNDLVSLWERKIGK 238
NK +L +P G D +L+ + +
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 3e-18
Identities = 52/281 (18%), Positives = 98/281 (34%), Gaps = 44/281 (15%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
I G TG +G +++ +K + + +VR K + GV GD
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN-----VEK---ASTLADQGVEVRHGDY 54
Query: 65 LNHESLVNAIKQVDVV--ISTVGHA---LLADQVKIIAAIKEAGNVTRF------FPSEF 113
ESL A V + IS + L+ ++ A ++AG V F E
Sbjct: 55 NQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAEES 113
Query: 114 GNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAP 173
+ H A E A+ IPYT++ + + + G A
Sbjct: 114 IIPLAHVHLATE--------------YAIRTTNIPYTFLR----NALYTDFFVNEGLRAS 155
Query: 174 PRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWE 233
++ G+ +++A + + NK + ++F++L +
Sbjct: 156 TESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP-WTFDELAQILS 214
Query: 234 RKIGKTLEREYVSEEQLLKNIQEAAPPQ---NVILSIYHSV 271
GK + + VS E+ + A P+ + +IY ++
Sbjct: 215 EVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAI 255
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-17
Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 37/231 (16%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
M KI+ IG +G++G ++ ++ G +VR P K ++ + +
Sbjct: 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRH-----PEKIKIENE----HLKVK 51
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHA-----LLADQVK----IIAAIKEAGNVTRF--- 108
DV + + + K D VIS + + +K II +K+AG V RF
Sbjct: 52 KADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMV 110
Query: 109 --FPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRA----VEAEGIPYTYVESYCFDGYFL 162
S F R + E +++ VKA ++ + I + + +
Sbjct: 111 GGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS----PAADM 166
Query: 163 PNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDDIATYTIKAVDDPRTLNK 212
++ G +D +++ GN +V +D A I ++ P+ +
Sbjct: 167 RPGVRTGRYRLGKDDMIVDIVGNSHISV----EDYAAAMIDELEHPKHHQE 213
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 1e-17
Identities = 41/219 (18%), Positives = 77/219 (35%), Gaps = 39/219 (17%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV- 64
KI +G TG +GK ++++ + + R+ + + V V DV
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARK-----VEQVPQYN-----NVKAVHFDVD 51
Query: 65 LNHESLVNAIKQVDVVISTVG-HALLADQV------KIIAAIKEAGNVTRF--FPSEFGN 115
E + + +D +I+ G +V K++ A ++A V RF + F
Sbjct: 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110
Query: 116 DVDRAHGAVEPAKSVYYDVKAR-IRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGA-AAP 173
++ GA A YY K + + YT ++QPGA
Sbjct: 111 QPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYT--------------IIQPGALTEE 156
Query: 174 PRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212
++ + D + D+A + V ++ K
Sbjct: 157 EATGLIDINDEVSASNTI--GDVADTIKELVMTDHSIGK 193
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 2e-17
Identities = 59/279 (21%), Positives = 99/279 (35%), Gaps = 43/279 (15%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
I+ G TG++G I ++ F + VR K V+ D
Sbjct: 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-----NVEKVP---DDWRGKVSVRQLDY 53
Query: 65 LNHESLVNAIKQVDVV--ISTVGHALL--ADQVK-IIAAIKEAGNVTRF-FPSEFGNDVD 118
N ES+V A K +D V I ++ H +V+ ++ A K++G V F + + +
Sbjct: 54 FNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHN 112
Query: 119 ------RAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA 172
G R + GI YTYV ++ L P
Sbjct: 113 NPFHMSPYFGYAS--------------RLLSTSGIDYTYVR----MAMYMDPLK-PYLPE 153
Query: 173 PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLW 232
+I G+ + Y +DIA I + +P T K + Y +L ++
Sbjct: 154 LMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYS--YDMKELAAIL 211
Query: 233 ERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSV 271
G ++ E VS E + E ++ S+YH+
Sbjct: 212 SEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAG 250
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 2e-17
Identities = 43/275 (15%), Positives = 81/275 (29%), Gaps = 28/275 (10%)
Query: 1 MASKSK-ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
MA + K I +G TG G ++ + GH V + V
Sbjct: 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS-----LKGLIAEELQAIPNVTL 55
Query: 60 VVGDVLN-HESLVNAIKQVDVV--ISTVGHALLADQVK-IIAAIKEAGNVTRF-FPSEFG 114
G +LN + + + +T K + A K AG + + + S
Sbjct: 56 FQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115
Query: 115 NDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPP 174
+ + AV + K + V G+P T+V + G + N
Sbjct: 116 HSLYGPWPAVP-----MWAPKFTVENYVRQLGLPSTFV----YAGIYNNNFTSLPYPLFQ 166
Query: 175 RDKV--------VILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFN 226
+ + P + E D+ ++ D I S
Sbjct: 167 MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPV 226
Query: 227 DLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQ 261
+ + + R + + + V + ++ NI Q
Sbjct: 227 QVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQ 261
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 76.2 bits (187), Expect = 1e-16
Identities = 21/152 (13%), Positives = 42/152 (27%), Gaps = 11/152 (7%)
Query: 6 KILSIGGTGYIGKFIVE-ASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
I +G G I + + + R+ + + V + G
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRIPPEIIDHERVTVIEGSF 61
Query: 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG-- 122
N L A+ +VV + +D I+ A+ S G +
Sbjct: 62 QNPGXLEQAVTNAEVVFVGAMES-GSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALE 120
Query: 123 --AVEPAKSVYYDVKARIRRAVEAEGIPYTYV 152
+ Y + + R + + YT +
Sbjct: 121 KWTFDNLPISYVQGERQARNVLRESNLNYTIL 152
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-14
Identities = 50/280 (17%), Positives = 96/280 (34%), Gaps = 45/280 (16%)
Query: 7 ILSIGGTGYIGKFIVEASVKAGHPTFV--LVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
I G TG +G +++E+ +K + + +VR P+K G+ D
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRN-----PAK---AQALAAQGITVRQADY 53
Query: 65 LNHESLVNAIKQVDVV--ISTVGHALLADQVK-IIAAIKEAGNVTR------FFPSEFGN 115
+ +L +A++ V+ + IS+ A Q + +I A K AG V
Sbjct: 54 GDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADTSPL 112
Query: 116 DVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPR 175
+ H E + + GI YT + +G++ N L AA
Sbjct: 113 GLADEHIETE--------------KMLADSGIVYTLLR----NGWYSENYLASAPAALEH 154
Query: 176 DKVVI-LGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWER 234
+ GDG K D A + + + K + ++ L + +
Sbjct: 155 GVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSA-WTLTQLAAELTK 211
Query: 235 KIGKTLEREYVSEEQLLKNIQEAAPPQ---NVILSIYHSV 271
+ GK + + +SE ++ P +++
Sbjct: 212 QSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGA 251
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 65.4 bits (159), Expect = 9e-13
Identities = 32/228 (14%), Positives = 60/228 (26%), Gaps = 42/228 (18%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KI +G TG G IV + + GH +VR+ P K+ LG
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKAADR-----LGATVATLVKE 51
Query: 66 NHESLVNAIKQVDVVISTVGH-------ALLADQVKIIAAIKEAGNVTRFFP-SEFGNDV 117
+ VD V+ + L D + ++ + F +
Sbjct: 52 PLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAM 111
Query: 118 DRAHG----------AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ 167
A A +P + + + +
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISP--------SEAFP 163
Query: 168 PGAAAPPR---DKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212
G A D +++ DG ++A + ++ P +
Sbjct: 164 SGPATSYVAGKDTLLVGEDGQSHITT---GNMALAILDQLEHPTAIRD 208
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 1e-12
Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 26/219 (11%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KI IG TG G I+E + GH +VR K +N + D+
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKITQTHK----DINILQKDIF 52
Query: 66 NHESLVNAIKQVDVVISTVGHA------LLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ ++ + +VV+ G + + +I+ + + +
Sbjct: 53 --DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQID 110
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFL--PNLLQPGAA----AP 173
G + +A+ + + F ++ + +PG
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQI 170
Query: 174 PRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212
+D ++ DGN +D A + ++ P LN+
Sbjct: 171 GKDHLLFGSDGNSFISM---EDYAIAVLDEIERPNHLNE 206
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 7e-12
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K +G TG +G A AGH ++ R S+ + L V ++L
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHR-----PSSQ---IQRLAYLEPECRVAEML 66
Query: 66 NHESLVNAIKQVDVVI 81
+H L A++ +D VI
Sbjct: 67 DHAGLERALRGLDGVI 82
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 39/255 (15%), Positives = 75/255 (29%), Gaps = 68/255 (26%)
Query: 1 MASKSK-ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNF 59
M S K +L G TG G+ +++ + V+ AP++ L +H + ++
Sbjct: 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVI-------APARKALAEHPR---LDN 50
Query: 60 VVGDVLNHESLVNAIKQVDVVISTVG------------HALLADQVKIIAAIKEAGNVTR 107
VG + E L +D +G A+ D +
Sbjct: 51 PVGPL--AELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARH 108
Query: 108 F-FPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLL 166
+ S A GA + Y VK + +A++ +G P +
Sbjct: 109 YLVVS--------ALGADAKSSIFYNRVKGELEQALQEQGWPQLTI-------------A 147
Query: 167 QPGAAAPPRD----------KVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216
+P PR+ + + G + D+A + +
Sbjct: 148 RPSLLFGPREEFRLAEILAAPIARILPGKYHGIE--ACDLARALWRLALEE--------- 196
Query: 217 QPPGNIYSFNDLVSL 231
++L L
Sbjct: 197 GKGVRFVESDELRKL 211
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 4e-08
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 42/190 (22%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPT--FVLVRESTLSAPSKSQLLDHFKNLGVN 58
M +K + +G +G G+ +++ ++ G + ++ R + D VN
Sbjct: 16 MQNK-SVFILGASGETGRVLLKEILEQGLFSKVTLIGR--------RKLTFDEEAYKNVN 66
Query: 59 FVVGDVLNHESLVNAIKQVDVVISTVG-----------HALLADQVKIIAAIKEAGNVTR 107
V D + +A + DV +G + D V A + +AG
Sbjct: 67 QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKH 126
Query: 108 FFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ 167
F + + GA + + +Y VK + VE V +
Sbjct: 127 FN-------LLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSV-------------FR 166
Query: 168 PGAAAPPRDK 177
PG R +
Sbjct: 167 PGVLLCDRQE 176
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 48.4 bits (114), Expect = 1e-06
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA+K +L + G+G++ + ++ +G V R + S +L ++ +
Sbjct: 1 MATK-SVL-MLGSGFVTRPTLDVLTDSGIKVTVACR----TLESAKKLSAGVQH--STPI 52
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIK 100
DV + +L + + D+VIS + + A +K K
Sbjct: 53 SLDVNDDAALDAEVAKHDLVISLIPYTFHATVIKSAIRQK 92
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ--LLDHFKNLGVN 58
M IL GGTG GK V + + ++V S Q + F + +
Sbjct: 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIV----YSRDELKQSEMAMEFNDPRMR 73
Query: 59 FVVGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEF 113
F +GDV + E L A++ VD+ I HA AA+K + + P E
Sbjct: 74 FFIGDVRDLERLNYALEGVDICI----HA---------AALKHVP-IAEYNPLEC 114
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-06
Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 12/129 (9%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
A + I + G G IG+ I + + + + L +GV
Sbjct: 2 NAMRWNIC-VVGAGKIGQMIAALLKTSSNYSVTVADHDL-------AALAVLNRMGVATK 53
Query: 61 VGDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRA 120
D + L A+ D VIS L I A K AG F +E +
Sbjct: 54 QVDAKDEAGLAKALGGFDAVISAAPFFL---TPIIAKAAKAAG-AHYFDLTEDVAATNAV 109
Query: 121 HGAVEPAKS 129
VE +++
Sbjct: 110 RALVEDSQT 118
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 6e-06
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 12/81 (14%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA K ++L G G +G+ + E + A V
Sbjct: 1 MAMK-RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP-----------NEECV 48
Query: 61 VGDVLNHESLVNAIKQVDVVI 81
D+ + ++ + D ++
Sbjct: 49 QCDLADANAVNAMVAGCDGIV 69
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 7e-06
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 11/77 (14%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
+++L G G +G I H + + V D+
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL----------GAAEA-HEEIVACDL 51
Query: 65 LNHESLVNAIKQVDVVI 81
+ +++ + +K D +I
Sbjct: 52 ADAQAVHDLVKDCDGII 68
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 23/124 (18%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-----VN 58
K ++ GGTG++G +I+++ ++ G+ V + + P + + + NL ++
Sbjct: 1 KGRVCVTGGTGFLGSWIIKSLLENGYS----VNTTIRADPERKRDVSFLTNLPGASEKLH 56
Query: 59 FVVGDVLNHESLVNAIKQVDVVI---STVGHALLADQVKIIA-----------AIKEAGN 104
F D+ N +S AI+ + S + A+ + + A +
Sbjct: 57 FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116
Query: 105 VTRF 108
V RF
Sbjct: 117 VKRF 120
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 20/124 (16%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-- 58
+ S +L G G++ +VE ++ G+ VR + SA + L +
Sbjct: 8 LPEGSLVLVTGANGFVASHVVEQLLEHGY----KVRGTARSASKLANLQKRWDAKYPGRF 63
Query: 59 --FVVGDVLNHESLVNAIKQVDVVI--------STVGHALLADQVK----IIAAIKEAGN 104
VV D+L + IK V S ++ + + A +
Sbjct: 64 ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS 123
Query: 105 VTRF 108
V RF
Sbjct: 124 VKRF 127
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 25/127 (19%)
Query: 1 MASKSK-ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG--- 56
M S+S+ + G +G+IG ++V ++ G+ VR +T+ P+ + + H +L
Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYT----VR-ATVRDPTNVKKVKHLLDLPKAE 55
Query: 57 --VNFVVGDVLNHESLVNAIKQVDVVI---STVGHALLADQVKIIA-----------AIK 100
+ D+ + S AIK V + + + ++I +
Sbjct: 56 THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCA 115
Query: 101 EAGNVTR 107
A V R
Sbjct: 116 AAKTVRR 122
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 5e-05
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
+L + G+G++ + +++ T++ + + K G + D
Sbjct: 23 GKNVL-LLGSGFVAQPVIDTLAANDD------INVTVACRTLANAQALAKPSGSKAISLD 75
Query: 64 VLNHESLVNAIKQVDVVISTV 84
V + +L + DVVIS +
Sbjct: 76 VTDDSALDKVLADNDVVISLI 96
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 6e-05
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 10 IGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHES 69
+G TG IG + E A P + ++ ++ +N+V D+ + +
Sbjct: 7 VGVTGIIGNSLAEILPLADTP----GGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDD 62
Query: 70 LVNAIKQVDVVI 81
+ + V
Sbjct: 63 SQAKLSPLTDVT 74
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 1e-04
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
+IL GG G +G ++E + GH V+ +T K ++L G++ + G V
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT----GKREVLPPVA--GLSVIEGSVT 75
Query: 66 NHESLVNAIKQ--VDVVI 81
+ L A V+
Sbjct: 76 DAGLLERAFDSFKPTHVV 93
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 23/116 (19%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG 62
S SKIL I G G +G + GH L R + GV ++
Sbjct: 2 SLSKIL-IAGCGDLGLELARRLTAQGHEVTGLRR-----SAQPMP-------AGVQTLIA 48
Query: 63 DVLNHESLVNAIK-QVDVVISTV---------GHALLADQVKIIAAIKEAGNVTRF 108
DV ++L + + + ++++ V + ++ + E +
Sbjct: 49 DVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHV 104
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} Length = 236 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 1e-04
Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 9/142 (6%)
Query: 12 GTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESL 70
G G IGKF+ E + G +L + +D F ++ V + + +++
Sbjct: 7 GYGAIGKFLAEWLERNGFEIAAILDVRGEHEKMVRG--IDEFLQREMDVAV-EAASQQAV 63
Query: 71 VNAIKQV-----DVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVE 125
+ +++ D+++ + G D + + + + S +D A E
Sbjct: 64 KDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE 123
Query: 126 PAKSVYYDVKARIRRAVEAEGI 147
+ + + R+ I
Sbjct: 124 LIEEIVLTTRKNWRQFGRKGVI 145
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 1e-04
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-----HFKNL--GVN 58
++L GG G+IG IVE + G V V LD +N+ GV
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLARGLE--VAV-------------LDNLATGKRENVPKGVP 46
Query: 59 FVVGDVLNHESLVNAIKQ--VDVVI 81
F D+ + E + A ++ V
Sbjct: 47 FFRVDLRDKEGVERAFREFRPTHVS 71
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 23/123 (18%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG----VN 58
K +GGTG++ +V+ ++ G+ V +T+ P + + H L +
Sbjct: 8 GKKTACVVGGTGFVASLLVKLLLQKGYA----VN-TTVRDPDNQKKVSHLLELQELGDLK 62
Query: 59 FVVGDVLNHESLVNAIKQVDVVI---STVGHALLADQVKIIA-----------AIKEAGN 104
D+ + S I D V + V A + +I A A +
Sbjct: 63 IFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKS 122
Query: 105 VTR 107
V R
Sbjct: 123 VKR 125
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS---APSKSQLLDHFKNLGVNFVVG 62
I IG G +G+ + + VK G V + TL P V+
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG----AVDARAA 71
Query: 63 DVLNHESLVNAIK-QVDVVI 81
D+ ++ + DV+
Sbjct: 72 DLSAPGEAEKLVEARPDVIF 91
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVL-----VRESTLSAPSKSQLLDHFKNLG 56
A L G G+IG ++E +K L + L + N
Sbjct: 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN-- 82
Query: 57 VNFVVGDVLNHESLVNAIKQVDVVI 81
F+ GD+ N + NA VD V+
Sbjct: 83 FKFIQGDIRNLDDCNNACAGVDYVL 107
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 310 | |||
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 100.0 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 100.0 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 100.0 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 100.0 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 100.0 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.98 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.98 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.98 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.98 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.98 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.98 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.98 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.98 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.96 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.96 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.95 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.95 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.94 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.94 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.93 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.93 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.87 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.87 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.85 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.84 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.84 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.83 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.83 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.83 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.82 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.82 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.82 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.82 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.82 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.82 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.82 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.82 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.82 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.81 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.81 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.81 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.81 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.81 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.81 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.81 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.81 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.81 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.81 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.8 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.8 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.8 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.8 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.8 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.8 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.8 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.8 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.8 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.8 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.8 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.8 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.79 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.79 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.79 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.79 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.79 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.79 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.79 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.79 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.79 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.79 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.79 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.79 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.79 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.79 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.78 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.78 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.78 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.78 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.78 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.78 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.78 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.78 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.78 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.78 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.78 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.78 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.78 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.78 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.78 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.77 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.77 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.77 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.77 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.77 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.77 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.77 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.77 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.77 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.77 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.77 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.77 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.76 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.76 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.76 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.76 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.76 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.76 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.76 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.76 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.76 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.76 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.76 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.76 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.76 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.76 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.76 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.76 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.76 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.76 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.75 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.75 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.75 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.75 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.75 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.75 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.75 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.75 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.75 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.75 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.75 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.75 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.75 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.75 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.74 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.74 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.74 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.74 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.74 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.74 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.74 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.74 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.74 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.74 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.73 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.73 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.73 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.73 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.73 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.73 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.73 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.73 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.73 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.73 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.73 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.73 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.73 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.73 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.73 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.73 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.73 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.73 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.72 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.72 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.72 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.72 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.71 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.71 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.71 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.71 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.71 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.71 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.71 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.71 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.7 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.7 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.7 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.7 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.7 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.69 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.69 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.69 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.69 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.69 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.69 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.69 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.68 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.68 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.68 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.68 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.67 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.67 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.67 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.67 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.66 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.66 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.66 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.64 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.64 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.64 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.63 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.63 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.62 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.61 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.61 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.6 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.6 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.58 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.56 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.55 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.55 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.54 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.51 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.5 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.43 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.35 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.31 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.29 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.26 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.25 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.21 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.21 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.19 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.12 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.11 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.08 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.06 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 99.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.99 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.99 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.98 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.96 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.94 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.91 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.88 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.88 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.88 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.87 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.86 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.84 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.74 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.73 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.71 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.69 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.6 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.53 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.44 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.44 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.42 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 98.35 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.34 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.32 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.28 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 98.23 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 98.21 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.2 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 98.17 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.14 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.13 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.12 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 98.06 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.01 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.01 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 98.01 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.99 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.98 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.94 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.9 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.89 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.87 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.87 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.86 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.86 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.86 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.86 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.84 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.83 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.82 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.81 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.8 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.79 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.79 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.79 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.79 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.79 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.77 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.75 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.71 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.71 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.68 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.68 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.68 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.66 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.66 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.65 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.65 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.64 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.62 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.61 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.61 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 97.6 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.58 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.58 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.57 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.56 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.56 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.55 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.55 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.55 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.52 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.51 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.51 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.5 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.5 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.49 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.49 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.49 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.49 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.48 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.48 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.48 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.47 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.45 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 97.44 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.43 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.43 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.43 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.43 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.42 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.42 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.41 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.41 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.41 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.39 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.39 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.38 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.38 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.38 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.37 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.35 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.35 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.35 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.35 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.35 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.34 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.34 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.34 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.32 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.32 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.32 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.32 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.31 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.3 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.3 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.29 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.29 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.28 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 97.27 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.27 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.26 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.25 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.25 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 97.24 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.23 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.22 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.22 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.22 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.21 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.21 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.21 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.21 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.21 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.21 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.2 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 97.19 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.19 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.18 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.16 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.16 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 97.15 | |
| 3o9z_A | 312 | Lipopolysaccaride biosynthesis protein WBPB; oxido | 97.15 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.15 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 97.15 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.15 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.15 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.14 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.14 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.14 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.12 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.12 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.09 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 97.08 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 97.08 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.08 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 97.08 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.08 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 97.07 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.06 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.06 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.06 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.05 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 97.05 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.04 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 97.04 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.04 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.03 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 97.03 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.02 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.02 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.02 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.02 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.02 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.01 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 97.01 |
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-47 Score=328.70 Aligned_cols=303 Identities=39% Similarity=0.713 Sum_probs=260.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|+|+||||||+||+++++.|+++|++|++++|+.+.. +.+...+..+...+++++.+|+.|.+++.++++ ++|+||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC-hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 46899999999999999999999999999999986433 456555566777899999999999999999999 999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecccc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYF 161 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~ 161 (310)
|+++...+.++.+++++|++.+++++||+|+||...++.+ +.. +...|+.+|+.+|+++++.+++++++||+.|++++
T Consensus 89 ~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~-~~~-p~~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~ 166 (346)
T 3i6i_A 89 STVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRAD-PVE-PGLNMYREKRRVRQLVEESGIPFTYICCNSIASWP 166 (346)
T ss_dssp ECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCC-CCT-THHHHHHHHHHHHHHHHHTTCCBEEEECCEESSCC
T ss_pred ECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccC-cCC-CcchHHHHHHHHHHHHHHcCCCEEEEEeccccccc
Confidence 9999888889999999999997789999999987655443 433 36789899999999999999999999999999988
Q ss_pred ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 162 LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
.+.+..........+.+.++++++..++|++++|+|++++.++.++...++.+++.++++.+|+.|+++.+++.+|++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 167 YYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp CSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred CccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 76655543233456678889999999999999999999999999987778999998777799999999999999999999
Q ss_pred eeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCC-CCccccccccCCCCcccCHHHHHHhhC
Q 021596 242 REYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIE-PSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
+..+|.+++.+.+...++|....+..++.++..|...+|+.+ .. +.+..+++|++++|+++|||++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~p~~~~t~~~e~l~~~~ 315 (346)
T 3i6i_A 247 RVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE-DVEVTTLYPEDSFRTVEECFGEYI 315 (346)
T ss_dssp EEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT-EEEHHHHSTTCCCCCHHHHHHHHH
T ss_pred eEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC-cccHHHhCCCCCcCcHHHHHHHHH
Confidence 999999999999988888888888888888888877667774 22 356789999999999999999863
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-47 Score=323.96 Aligned_cols=307 Identities=65% Similarity=1.038 Sum_probs=251.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC-CCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-APSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|++||+|+||||||+||+++++.|+++|++|++++|+.+.. .+.+...+..+...+++++.+|+.|++++.++++++|+
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 80 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV 80 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence 77788999999999999999999999999999999985432 12333334455567899999999999999999999999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDG 159 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~ 159 (310)
|||+++......+.+++++|++.|++++||+|+||....+.. +..|..+.| .+|..+|+++++.+++++++||+.|++
T Consensus 81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~-~~~p~~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~ 158 (308)
T 1qyc_A 81 VISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH-AVEPAKSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAG 158 (308)
T ss_dssp EEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCC-CCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHH
T ss_pred EEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccc-cCCcchhHH-HHHHHHHHHHHhcCCCeEEEEeceecc
Confidence 999999877778899999999986689999999986544333 334445678 999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 160 YFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
++.+.+..........+...++++++..+++++++|+|++++.+++++...++.+++.++++.+|+.|+++.+++.+|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~ 238 (308)
T 1qyc_A 159 YFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT 238 (308)
T ss_dssp HHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSC
T ss_pred ccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCC
Confidence 87665443321223456677888889999999999999999999988776788899987767899999999999999999
Q ss_pred ceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 240 LEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
+++..+|.+++.+.+...++|....+..++.++..|....+..+.. +.+..+++|+++++|++|||++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~t~~~~l~~~~ 308 (308)
T 1qyc_A 239 LEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPDVKYTTVDEYLSNFV 308 (308)
T ss_dssp CEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred CceEeCCHHHHHHHHhcCCCchhhHHHhhhheeecCcccccccCCc-cccHHhhCCCcccccHHHHHHHhC
Confidence 9999999999999888878888776666777666654434544332 234568899999999999999875
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=320.51 Aligned_cols=308 Identities=46% Similarity=0.809 Sum_probs=246.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+.||+|+||||||++|+++++.|+++|++|++++|+.+...+.+...+..+...+++++.+|+.|++++.++++++|+|
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~v 80 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV 80 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence 77788999999999999999999999999999999986543223333334455678999999999999999999999999
Q ss_pred EEcccch----hhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecce
Q 021596 81 ISTVGHA----LLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYC 156 (310)
Q Consensus 81 i~~a~~~----~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~ 156 (310)
||+++.. ...++.+++++|++.|+++|||+|+||........+..|..+.| .+|..+|+++++.+++++++||++
T Consensus 81 i~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ilrp~~ 159 (313)
T 1qyd_A 81 ISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYTYVSSNM 159 (313)
T ss_dssp EECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBCEEECCE
T ss_pred EECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeEEEEece
Confidence 9999876 36789999999999866899999988864432111333445678 999999999999999999999999
Q ss_pred eccccccccCCCC-CCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHH
Q 021596 157 FDGYFLPNLLQPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 235 (310)
|++++.+.+.... ......+.+.++++++..+++++++|+|++++.+++++...++.+++.++++.+|+.|+++.+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~ 239 (313)
T 1qyd_A 160 FAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 239 (313)
T ss_dssp EHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHH
T ss_pred eccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHh
Confidence 9998766544321 011334556677888899999999999999999998887678889998776789999999999999
Q ss_pred hCCCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 236 IGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
+|+++++..+|.+++.+.+...+.|....+..++.++..+....+..... +.+..+++|+++++|++|||++++
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~t~~~~l~~~~ 313 (313)
T 1qyd_A 240 SEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYPEVKYVTMDSYLERYV 313 (313)
T ss_dssp HTCCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred cCCCCceEECCHHHHHHHHhcCCCcccchhhheeeEEecccccCCCcCcc-cccHhhcCCCcccccHHHHHHhhC
Confidence 99999999999999988887777787666566666666554333444332 124578899999999999999875
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=315.16 Aligned_cols=303 Identities=57% Similarity=0.925 Sum_probs=248.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC-CCCCC-chhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-TLSAP-SKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~-~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
||+|+||||||+||+++++.|+++|++|++++|+. +...+ .+...+..+...+++++.+|+.|++++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 67999999999999999999999999999999985 22112 34433444556789999999999999999999999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecccc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYF 161 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~ 161 (310)
|+++......+.+++++|++.|++++||+|+||...++.. +..|..+.| .+|..+|+++++.+++++++||++|++++
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~-~~~p~~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~ 159 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHD-AVEPVRQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYF 159 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCC-CCTTHHHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTT
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEeecccccCccccc-CCCcchhHH-HHHHHHHHHHHHcCCCeEEEEcceeeccc
Confidence 9999876788999999999986589999999986544322 334445789 99999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 162 LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
.+.+..........+.+.++++++..+++++++|+|++++.++.++...++.+++.++++.+|+.|+++.+++.+|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 160 LRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp GGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred cccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 76554432112345567778888899999999999999999998877678889998776789999999999999999999
Q ss_pred eeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccc-cccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 242 REYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQT-NFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
+..+|.+++.+.+...++|....+..++.++..|... ++..+. +.+..+++|++++++++|||++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~t~~~~l~~~~ 307 (307)
T 2gas_A 240 KTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAK--DIEASEAYPDVTYTTADEYLNQFV 307 (307)
T ss_dssp EEEECHHHHHHHHHHBCTTHHHHHHHHHHHHTSCTTCCCCCTTT--EEEHHHHCTTCCCCCHHHHHGGGC
T ss_pred eeecCHHHHHHHHhcCCCchhHHHHHHHHHeecCcccCCCCcCC--CcchHhhCCCCccccHHHHHHHhC
Confidence 9999999999988888888877777777777665433 344432 234678999999999999999875
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=311.15 Aligned_cols=295 Identities=44% Similarity=0.796 Sum_probs=243.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
++|+||||||+||+++++.|+++|++|++++|+.+. +...+..+...+++++.+|+.|++++.++++++|+|||++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS----CHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc----hhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 589999999999999999999999999999998531 2323344556789999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceeccccccc
Q 021596 85 GHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPN 164 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~~~~ 164 (310)
+......+.+++++|++.+++++||+|+||...++.. +..|....| .+|..+|+++++.+++++++||++|++++.+.
T Consensus 88 ~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~-~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~~~~~~ 165 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRIN-ALPPFEALI-ERKRMIRRAIEEANIPYTYVSANCFASYFINY 165 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCC-CCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECCEEHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhcCCCCEEEeeccccCccccc-CCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcceehhhhhhh
Confidence 9876788999999999986589999999986543322 323334678 99999999999999999999999999987665
Q ss_pred cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeee
Q 021596 165 LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244 (310)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 244 (310)
+.... ...+...++++++..+++++++|+|++++.++.++...++.+++.++++.+|+.|+++.+++.+|+++++..
T Consensus 166 ~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~ 242 (318)
T 2r6j_A 166 LLRPY---DPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIH 242 (318)
T ss_dssp HHCTT---CCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEE
T ss_pred hcccc---CCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceee
Confidence 44322 345567778888899999999999999999998876668889998776789999999999999999999999
Q ss_pred cCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 245 VSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
+|.+++.+.+...++|....+..++.+|..|...++..+.. +..+.+++|++++|+++|||++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~l~~~ 306 (318)
T 2r6j_A 243 VPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIF 306 (318)
T ss_dssp ECHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTT-CEEGGGTCTTCCCCCHHHHHHHH
T ss_pred cCHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccc-cchHHHhCCCCccccHHHHHHHH
Confidence 99999988887778888776666777776665434544332 23567889999999999999875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=311.71 Aligned_cols=304 Identities=44% Similarity=0.773 Sum_probs=244.8
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC-CCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES-TLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+||+|+||||||+||+++++.|+++|++|++++|+. +...+.+...+..+...+++++.+|+.|++++.++++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 468999999999999999999999999999999985 3221233333444556789999999999999999999999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecccc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYF 161 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~ 161 (310)
|+++......+.+++++|++.|++++||+|+||...++.. +..|..+.| .+|..+|+++++.+++++++||++|++++
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~-~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~~ 160 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIK-PLPPFESVL-EKKRIIRRAIEAAALPYTYVSANCFGAYF 160 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCC-CCHHHHHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHH
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccc-cCCCcchHH-HHHHHHHHHHHHcCCCeEEEEeceecccc
Confidence 9999876788999999999986589999998886544322 323335679 99999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 162 LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
.+.+.........++....+++++..+++++++|+|++++.++.++...++.+++.++++.+|+.|+++.+++.+|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 161 VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 65443321111345567778888999999999999999999998877678889998776799999999999999999999
Q ss_pred eeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 242 REYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
+..+|.+++.+.+...++|....+..++.++..+....+..+.. +.+.++++|+++++|++||+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~l~~~ 307 (321)
T 3c1o_A 241 KVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKD-DIEASNLYPELEFTSIDGLLDLF 307 (321)
T ss_dssp EEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTTCTTTSSCCCSS-CEEGGGTCTTCCCCCHHHHHHHH
T ss_pred eeeCCHHHHHHHHhcCCCchhhhHhhhheeeeccccCCCCCCcc-cchHhhhCCCCccccHHHHHHHH
Confidence 99999999998888878887766666666666554333444321 13456888999999999999875
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=261.49 Aligned_cols=281 Identities=17% Similarity=0.217 Sum_probs=207.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|+++|+|+||||||+||+++++.|+++| ++|++++|+.+ +.. ...+...+++++.+|+.|++++.++++++|+
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-----~~~-~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-----KKA-AKELRLQGAEVVQGDQDDQVIMELALNGAYA 75 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-----SHH-HHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-----CHH-HHHHHHCCCEEEEecCCCHHHHHHHHhcCCE
Confidence 6667899999999999999999999999 99999999843 221 1334457899999999999999999999999
Q ss_pred EEEcccchh-------hhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEE
Q 021596 80 VISTVGHAL-------LADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYV 152 (310)
Q Consensus 80 Vi~~a~~~~-------~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~ 152 (310)
|||+++... +..+.+++++|++.+ ++++|++|........ . .+....|+.+|..+|+++++.+++++++
T Consensus 76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~--~-~~~~~~y~~sK~~~e~~~~~~gi~~~il 151 (299)
T 2wm3_A 76 TFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT--A-GRLAAAHFDGKGEVEEYFRDIGVPMTSV 151 (299)
T ss_dssp EEECCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT--T-TSCCCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEeCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC--C-CcccCchhhHHHHHHHHHHHCCCCEEEE
Confidence 999998542 457889999999998 9999994432211111 1 1123568899999999999999999999
Q ss_pred ecceeccccccccCCCCCCCCCCC-e-EEEecCCCceeEeeccchHHHHHHHHhcCC-ccCCceEEEcCCCCccCHHHHH
Q 021596 153 ESYCFDGYFLPNLLQPGAAAPPRD-K-VVILGDGNPKAVYNKEDDIATYTIKAVDDP-RTLNKNLYIQPPGNIYSFNDLV 229 (310)
Q Consensus 153 rp~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~-~~~~~~~~~~~~~~~~s~~e~~ 229 (310)
||+.+++++...+.... ...+ . ....+.++..+++++++|+|++++.++.++ ...++.|++.+ +.+|+.|++
T Consensus 152 rp~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g--~~~s~~e~~ 226 (299)
T 2wm3_A 152 RLPCYFENLLSHFLPQK---APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST--CRHTAEEYA 226 (299)
T ss_dssp ECCEEGGGGGTTTCCEE---CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS--EEECHHHHH
T ss_pred eecHHhhhchhhcCCcc---cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee--ccCCHHHHH
Confidence 99999998765332211 1122 2 222334778899999999999999999875 34578888864 479999999
Q ss_pred HHHHHHhCCCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 230 SLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 230 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
+.+++.+|+++++..+|.+++.. .++|....+..+..++..|. ..+ ..+...+ |.++++++||+++.
T Consensus 227 ~~~~~~~g~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~-g~~~~~~~~~~~~~ 293 (299)
T 2wm3_A 227 ALLTKHTRKVVHDAKMTPEDYEK----LGFPGARDLANMFRFYALRP----DRD----IELTLRL-NPKALTLDQWLEQH 293 (299)
T ss_dssp HHHHHHHSSCEEECCCCTHHHHT----TCSTTHHHHHHHHHHHTTCC----CCC----HHHHHHH-CTTCCCHHHHHHHH
T ss_pred HHHHHHHCCCceeEecCHHHHHh----cCCCcHHHHHHHHHHHHhcC----CCC----HHHHHHh-CCCCCCHHHHHHhC
Confidence 99999999999999999988764 35555222333333333331 111 1233333 77899999999874
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=262.65 Aligned_cols=272 Identities=21% Similarity=0.261 Sum_probs=207.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|+|+||||||+||+++++.|++. |++|++++|+.+.. ..+...+++++.+|+.|++++.++++++|+|||+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~--------~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV--------PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS--------CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH--------HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 57999999999999999999998 89999999994332 3344678999999999999999999999999999
Q ss_pred ccchh-----hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEeccee
Q 021596 84 VGHAL-----LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCF 157 (310)
Q Consensus 84 a~~~~-----~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~ 157 (310)
++... +..+.+++++|++.+ +++||+ |+++..... | ..+...+..+|+.+++.+++++++||+.+
T Consensus 73 a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~------~--~~~~~~~~~~e~~~~~~g~~~~ilrp~~~ 143 (289)
T 3e48_A 73 PSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN------P--FHMSPYFGYASRLLSTSGIDYTYVRMAMY 143 (289)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC------C--STTHHHHHHHHHHHHHHCCEEEEEEECEE
T ss_pred CCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC------C--CccchhHHHHHHHHHHcCCCEEEEecccc
Confidence 98753 577899999999999 999998 777643211 1 11223345788888899999999999999
Q ss_pred ccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 158 DGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
++++...+... . .......+.++..+++++++|+|++++.++.++...+++|++. + +.+|+.|+++.+++.+|
T Consensus 144 ~~~~~~~~~~~----~-~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~-~~~s~~e~~~~~~~~~g 216 (289)
T 3e48_A 144 MDPLKPYLPEL----M-NMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-G-YSYDMKELAAILSEASG 216 (289)
T ss_dssp STTHHHHHHHH----H-HHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-C-EEEEHHHHHHHHHHHHT
T ss_pred ccccHHHHHHH----H-HCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-C-CcCCHHHHHHHHHHHHC
Confidence 99865332211 1 1223445667888999999999999999999887668899997 4 59999999999999999
Q ss_pred CCceeeecCHHHHHHHHHh-cCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 238 KTLEREYVSEEQLLKNIQE-AAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
+++++..+|.+++.+.+.. .+++. .+..++.....|. +.... ..+++.+ |.++++++||++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~g~---~~~~~---~~~~~~~-G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 217 TEIKYEPVSLETFAEMYDEPKGFGA--LLASMYHAGARGL---LDQES---NDFKQLV-NDQPQTLQSFLQEN 280 (289)
T ss_dssp SCCEECCCCHHHHHHHTCCSTTHHH--HHHHHHHHHHTTT---TCCCC---SHHHHHH-SSCCCCHHHHHHC-
T ss_pred CceeEEeCCHHHHHHHhcCCccHHH--HHHHHHHHHHCCC---ccccC---chHHHHh-CCCCCCHHHHHHHH
Confidence 9999999999999887654 22221 1233333333332 22221 2344444 89999999999875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=255.63 Aligned_cols=274 Identities=18% Similarity=0.265 Sum_probs=207.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++ |++|++++|+.+. . ..+...+++++.+|+.|++++.++++++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----A---STLADQGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----T---HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----H---hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 57999999999999999999999 9999999998432 2 233356899999999999999999999999999
Q ss_pred cccch-----hhhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecce
Q 021596 83 TVGHA-----LLADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYC 156 (310)
Q Consensus 83 ~a~~~-----~~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~ 156 (310)
+++.. .+.++.+++++|++.+ +++||+ |+.+.. .. ...|+.+|..+|+++++.+++++++||+.
T Consensus 73 ~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~---~~------~~~y~~~K~~~E~~~~~~~~~~~ilrp~~ 142 (287)
T 2jl1_A 73 ISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAE---ES------IIPLAHVHLATEYAIRTTNIPYTFLRNAL 142 (287)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG---GC------CSTHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred cCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC---CC------CCchHHHHHHHHHHHHHcCCCeEEEECCE
Confidence 99863 2568899999999998 999998 554331 11 24799999999999999999999999999
Q ss_pred eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHh
Q 021596 157 FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 236 (310)
++++....+.... ...+... .+.++..+++++++|+|++++.+++++...++.|++.++ +.+|+.|+++.+++.+
T Consensus 143 ~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~ 217 (287)
T 2jl1_A 143 YTDFFVNEGLRAS---TESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSN-QPWTFDELAQILSEVS 217 (287)
T ss_dssp BHHHHSSGGGHHH---HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCS-SCBCHHHHHHHHHHHH
T ss_pred eccccchhhHHHH---hhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCC-CcCCHHHHHHHHHHHH
Confidence 9887532221110 1122333 455677889999999999999999876556788988755 4899999999999999
Q ss_pred CCCceeeecCHHHHHHHHHhcCCCcchh--HHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhh
Q 021596 237 GKTLEREYVSEEQLLKNIQEAAPPQNVI--LSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQF 309 (310)
Q Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~ 309 (310)
|++.++..+|.+++.......+.|.... +..+...+..+. +..+. .++.+.+ | ++++++|+|+++
T Consensus 218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~l-G-~~~~l~e~l~~~ 284 (287)
T 2jl1_A 218 GKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGE---ASKTS---DDLQKLI-G-SLTPLKETVKQA 284 (287)
T ss_dssp SSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTT---TCCCC---SHHHHHH-S-SCCCHHHHHHHH
T ss_pred CCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCC---CcCCc---hHHHHHh-C-CCCCHHHHHHHH
Confidence 9999999999988776665555554432 111111111111 22222 2344545 6 889999999875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=253.39 Aligned_cols=274 Identities=17% Similarity=0.238 Sum_probs=204.4
Q ss_pred eEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 6 KILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+||||||+||+++++.|+++ |++|++++|+.+.. ..+...+++++.+|+.|++++.++++++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA--------QALAAQGITVRQADYGDEAALTSALQGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC--------HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh--------hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 5899999999999999999998 99999999984322 2333568999999999999999999999999999
Q ss_pred ccchh---hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceecc
Q 021596 84 VGHAL---LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDG 159 (310)
Q Consensus 84 a~~~~---~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~ 159 (310)
++... +.++.+++++|++.+ +++||+ |+.+.. . . ...|+.+|..+|+++++.+++++++||++|++
T Consensus 73 a~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~----~---~--~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~ 142 (286)
T 2zcu_A 73 SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD----T---S--PLGLADEHIETEKMLADSGIVYTLLRNGWYSE 142 (286)
T ss_dssp C--------CHHHHHHHHHHHHT-CCEEEEEEETTTT----T---C--CSTTHHHHHHHHHHHHHHCSEEEEEEECCBHH
T ss_pred CCCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC----C---C--cchhHHHHHHHHHHHHHcCCCeEEEeChHHhh
Confidence 98632 678999999999998 999998 544332 1 1 24799999999999999999999999999988
Q ss_pred ccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 160 YFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+....+... ...+... .+.++..+++++++|+|++++.+++++...++.|++.++ +.+|+.|+++.+.+.+|++
T Consensus 143 ~~~~~~~~~----~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 143 NYLASAPAA----LEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGD-SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp HHHTTHHHH----HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCS-SCBCHHHHHHHHHHHHSSC
T ss_pred hhHHHhHHh----hcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCC-CcCCHHHHHHHHHHHHCCC
Confidence 653222111 1223333 556778899999999999999999876656788999855 4899999999999999999
Q ss_pred ceeeecCHHHHHHHHHhcCCCcchh--HHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 240 LEREYVSEEQLLKNIQEAAPPQNVI--LSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
.++..+|.+++...+...++|.... +..+...+..+. +..+. .++.+.+ |.++++++|+|++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~l-g~~~~~~~e~l~~~~ 282 (286)
T 2zcu_A 217 VTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGG---LFDDS---KTLSKLI-GHPTTTLAESVSHLF 282 (286)
T ss_dssp CEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTT---TCCCC---CHHHHHH-TSCCCCHHHHHHGGG
T ss_pred CceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC---CccCc---hHHHHHh-CcCCCCHHHHHHHHH
Confidence 9999999987766554445554322 111111111111 22222 2344445 578899999999863
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=248.46 Aligned_cols=224 Identities=15% Similarity=0.215 Sum_probs=180.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|+|||||||||+++++.|+++|++|++++|+.. . . . + .+++++.+|+. .+++.++++++|+|||+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~----~---~-~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-N----K---A-I--NDYEYRVSDYT-LEDLINQLNDVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC-c----c---c-C--CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence 489999999999999999999999999999999822 1 1 1 1 28999999999 99999999999999999
Q ss_pred ccchh-----------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHHHHHHH
Q 021596 84 VGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIRRAVEA 144 (310)
Q Consensus 84 a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e~~l~~ 144 (310)
|+... +.++.+++++|++.+ +++||+ |+ |+... .+.. +.. +.+.|+.+|..+|++++.
T Consensus 70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~-~~~-p~~~Y~~sK~~~E~~~~~ 146 (311)
T 3m2p_A 70 AATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKE-LPL-PDLMYGVSKLACEHIGNI 146 (311)
T ss_dssp CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTS-CCC-CSSHHHHHHHHHHHHHHH
T ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCC-CCC-CCchhHHHHHHHHHHHHH
Confidence 98642 667899999999998 999988 43 54332 1222 333 367899999999999876
Q ss_pred ----cCCCEEEEecceecccccc------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceE
Q 021596 145 ----EGIPYTYVESYCFDGYFLP------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNL 214 (310)
Q Consensus 145 ----~~~~~~i~rp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 214 (310)
.+++++++||+.+++.... .+.... ..+..+.++++++..+++++++|+|++++.+++.+. .+++|
T Consensus 147 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~ 222 (311)
T 3m2p_A 147 YSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQA---FHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTF 222 (311)
T ss_dssp HHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHH---HTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEE
T ss_pred HHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHH---HcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeE
Confidence 6999999999998875432 111111 345567777888999999999999999999998876 67889
Q ss_pred EEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 215 YIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 215 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
|++++. .+|+.|+++.+++.+|.+.++...+.
T Consensus 223 ~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~ 254 (311)
T 3m2p_A 223 NIGSGD-ALTNYEVANTINNAFGNKDNLLVKNP 254 (311)
T ss_dssp EECCSC-EECHHHHHHHHHHHTTCTTCEEECSS
T ss_pred EeCCCC-cccHHHHHHHHHHHhCCCCcceecCC
Confidence 998654 89999999999999999877776654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=248.10 Aligned_cols=230 Identities=19% Similarity=0.152 Sum_probs=179.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-------CCcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-------LGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-------~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
+|+|||||||||||+++++.|+++|++|++++|+.+.. ... ...+.. .+++++.+|+.|.+++.+++++
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH-QYN---LDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHH---HHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc-hhh---hhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 58999999999999999999999999999999986533 111 122222 6899999999999999999999
Q ss_pred CCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHH
Q 021596 77 VDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDV 134 (310)
Q Consensus 77 ~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~ 134 (310)
+|+|||+|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+.. +.+.|+.+
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~-p~~~Y~~s 178 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGN-PLSPYAVT 178 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCC-CCSHHHHH
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCC-CCChhHHH
Confidence 999999998632 667889999999998 999988 43 443221 1221333 36789999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceeccccccccCCC------CC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQP------GA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|..+|++++. .+++++++||+.++|......... .. ....+..+.++++++..++|++++|+|++++.+
T Consensus 179 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~ 258 (351)
T 3ruf_A 179 KYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILS 258 (351)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 9999998864 599999999998887643211000 00 003455677888899999999999999999999
Q ss_pred hcC-CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 204 VDD-PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 204 l~~-~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+.. +...+++||++++. .+|+.|+++.+.+.+|.+.
T Consensus 259 ~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 259 ALAKDSAKDNIYNVAVGD-RTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp HTCCGGGCSEEEEESCSC-CEEHHHHHHHHHHHHHTTC
T ss_pred HhhccccCCCEEEeCCCC-cccHHHHHHHHHHHhCccc
Confidence 987 45578889998654 8999999999999999853
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=240.93 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=183.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
|+++|+|+|||||||||+++++.|+++|++|++++|+.... ......+......+++++.+|+.|.+++.++++ ++|
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK-REAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC-THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch-HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 66678999999999999999999999999999999986543 222222222335689999999999999999998 899
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc---cCCCCCCcchhhHHHHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR---AHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~---~~~~~~~~~~~y~~~K~ 136 (310)
+|||+|+... +.++.+++++|++.+ ++++|+ |+ |+..... ++.+. ++.+.|+.+|.
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~-~~~~~Y~~sK~ 158 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPL-SATNPYGQTKL 158 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCC-BCSSHHHHHHH
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCC-CCCChhHHHHH
Confidence 9999998642 567889999999998 899988 43 4432211 12122 24678999999
Q ss_pred HHHHHHHH----c-CCCEEEEecceeccccccccCCCCC--------------CCCCCCeEEEec------CCCceeEee
Q 021596 137 RIRRAVEA----E-GIPYTYVESYCFDGYFLPNLLQPGA--------------AAPPRDKVVILG------DGNPKAVYN 191 (310)
Q Consensus 137 ~~e~~l~~----~-~~~~~i~rp~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~------~~~~~~~~i 191 (310)
.+|++++. . +++++++||+.+++........... .......+.+++ +++..++|+
T Consensus 159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i 238 (341)
T 3enk_A 159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI 238 (341)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence 99999875 2 4999999998888753211110000 001123455666 788899999
Q ss_pred ccchHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 192 KEDDIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
|++|+|++++.+++.+ ...+++||+.++ +.+|+.|+++.+.+.+|++.++...+
T Consensus 239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 294 (341)
T 3enk_A 239 HVVDLARGHIAALDALERRDASLTVNLGTG-RGYSVLEVVRAFEKASGRAVPYELVA 294 (341)
T ss_dssp EHHHHHHHHHHHHHHHHHHTSCEEEEESCS-CCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EHHHHHHHHHHHHHhhhcCCcceEEEeCCC-CceeHHHHHHHHHHHhCCCcceeeCC
Confidence 9999999999999762 346788999765 48999999999999999988776665
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=246.16 Aligned_cols=228 Identities=18% Similarity=0.184 Sum_probs=176.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~ 79 (310)
+|+|||||||||||+++++.|+++| ++|++++|....... .........++++++.+|+.|.+++.+++++ +|+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL--NNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG--GGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch--hhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 6899999999999999999999999 567777776432211 1111112235899999999999999999996 999
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC-----ccccCCCCCCcchhhHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND-----VDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~-----~~~~~~~~~~~~~~y~~~K 135 (310)
|||+|+... +.++.+++++|++.+ +++||+ |+ |+.. ..+.. +.. +.+.|+.+|
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~-~~~-p~~~Y~~sK 178 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEET-PLA-PNSPYSSSK 178 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTS-CCC-CCSHHHHHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCC-CCC-CCChhHHHH
Confidence 999998643 567899999999998 999988 43 4432 11222 333 367899999
Q ss_pred HHHHHHHHH----cCCCEEEEecceecccccc------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDGYFLP------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
..+|++++. .+++++++||+.++|.... .+.... ..+..+.++++++..+++++++|+|++++.+++
T Consensus 179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 255 (346)
T 4egb_A 179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNA---LEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 255 (346)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHH---HTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHH---HcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 999999876 5999999999998886421 111111 345557788889999999999999999999998
Q ss_pred CCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 206 DPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
.+. .+++||+.++. .+|+.|+++.+.+.+|.+.+
T Consensus 256 ~~~-~g~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 256 KGR-VGEVYNIGGNN-EKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp HCC-TTCEEEECCSC-CEEHHHHHHHHHHHHTCCGG
T ss_pred cCC-CCCEEEECCCC-ceeHHHHHHHHHHHhCCCcc
Confidence 766 67889998654 89999999999999998754
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=247.24 Aligned_cols=223 Identities=19% Similarity=0.207 Sum_probs=178.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|||||||||||+++++.|+++|++|++++|+.+. .+++++.+|+.|.+++.++++++|+|||+
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 5799999999999999999999999999999998431 47889999999999999999999999999
Q ss_pred ccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC------ccccCCCCCCcchhhHHHHHHHHH
Q 021596 84 VGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND------VDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 84 a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~------~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
|+... +.++.+++++|++.+ +++||+ |+ |+.. ..+.. +. .+.+.|+.+|..+|+
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~-~~-~~~~~Y~~sK~~~E~ 161 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDH-PL-CPNSPYGLTKLLGEE 161 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTS-CC-CCCSHHHHHHHHHHH
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCC-CC-CCCChHHHHHHHHHH
Confidence 98653 567899999999998 999988 43 5541 11222 33 346789999999999
Q ss_pred HHHH----cCCCEEEEecceec-------------ccc-----------------ccccCCCCCCCCCCCeEEEecCCCc
Q 021596 141 AVEA----EGIPYTYVESYCFD-------------GYF-----------------LPNLLQPGAAAPPRDKVVILGDGNP 186 (310)
Q Consensus 141 ~l~~----~~~~~~i~rp~~~~-------------~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (310)
+++. .+++++++||+.++ |.. ++.+.... ..+..+.++++++.
T Consensus 162 ~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~ 238 (347)
T 4id9_A 162 LVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSR---DIGEPSHILARNEN 238 (347)
T ss_dssp HHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHH---CCSSCCEEEEECTT
T ss_pred HHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHH---HcCCCeEEeCCCCc
Confidence 9863 68999999999888 432 11111111 34555677777888
Q ss_pred eeEe----eccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 187 KAVY----NKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 187 ~~~~----i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
.++| ++++|+|++++.+++.+...+++||++++. .+|+.|+++.+.+.+|.+.++...|.
T Consensus 239 ~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p~ 302 (347)
T 4id9_A 239 GRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADE-PADFAALLPKIAALTGLPIVTVDFPG 302 (347)
T ss_dssp CCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSS-CEEHHHHHHHHHHHHCCCEEEEECSS
T ss_pred ccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCC-cccHHHHHHHHHHHhCCCCceeeCCC
Confidence 8888 999999999999999886568899998654 89999999999999999887766554
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=250.61 Aligned_cols=231 Identities=19% Similarity=0.283 Sum_probs=179.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC-CHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL-NHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~~~~~~~~~d~Vi 81 (310)
||+|||||||||||+++++.|+++ |++|++++|+.+.. . ......+++++.+|+. |.+++.++++++|+||
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-----~--~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi 96 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL-----G--DLVKHERMHFFEGDITINKEWVEYHVKKCDVIL 96 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT-----G--GGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh-----h--hhccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence 589999999999999999999998 89999999985432 1 1122468999999999 9999999999999999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCC-----CCCCcchhhHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHG-----AVEPAKSVYYD 133 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~-----~~~~~~~~y~~ 133 (310)
|+|+... +.++.+++++|++.+ ++||+ |+ |+.... +.+. +...+.+.|+.
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~ 174 (372)
T 3slg_A 97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYAC 174 (372)
T ss_dssp ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence 9998643 466789999999987 68777 54 443221 1110 11134568999
Q ss_pred HHHHHHHHHHHc---CCCEEEEecceeccccccccCC----------CCC-CCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 134 VKARIRRAVEAE---GIPYTYVESYCFDGYFLPNLLQ----------PGA-AAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 134 ~K~~~e~~l~~~---~~~~~i~rp~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
+|..+|++++.. +++++++||+.++|........ ... ....+..+.++++++..++|++++|+|++
T Consensus 175 sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 254 (372)
T 3slg_A 175 SKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISA 254 (372)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHH
Confidence 999999999876 8999999999888765321100 000 00234567788888999999999999999
Q ss_pred HHHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 200 TIKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
++.+++.+. ..+++||++++++.+|+.|+++.+.+.+|.+.++.
T Consensus 255 ~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~ 300 (372)
T 3slg_A 255 LMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYA 300 (372)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTH
T ss_pred HHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccc
Confidence 999998875 56889999865469999999999999999875543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=240.19 Aligned_cols=232 Identities=18% Similarity=0.158 Sum_probs=174.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|+|||||||||+++++.|+++|++|++++|+.+. . ..+...+++++.+|+.|.+++.++++++|+|||+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~---~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ-----I---QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS 84 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSC-----G---GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHh-----h---hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 5799999999999999999999999999999998432 2 2233458999999999999999999999999999
Q ss_pred ccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCCCCCc---chhhHHHHHHHH
Q 021596 84 VGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGAVEPA---KSVYYDVKARIR 139 (310)
Q Consensus 84 a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~~~~~---~~~y~~~K~~~e 139 (310)
|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+..|. .+.|+.+|..+|
T Consensus 85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e 163 (342)
T 2x4g_A 85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD 163 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHH
T ss_pred CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHH
Confidence 98532 567889999999998 899887 44 432211 122122221 568999999999
Q ss_pred HHHHH---cCCCEEEEecceeccccc-cccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceE
Q 021596 140 RAVEA---EGIPYTYVESYCFDGYFL-PNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNL 214 (310)
Q Consensus 140 ~~l~~---~~~~~~i~rp~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 214 (310)
++++. .+++++++||+.+++... .......... ..+....+ ++..+++++++|+|++++.+++++.. +++|
T Consensus 164 ~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~ 239 (342)
T 2x4g_A 164 EQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY 239 (342)
T ss_dssp HHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred HHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence 99876 389999999999888643 1000000000 12222333 56788999999999999999987654 7888
Q ss_pred EEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHH
Q 021596 215 YIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLL 251 (310)
Q Consensus 215 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 251 (310)
++.+ ++ +|+.|+++.+.+.+|.+.++ .+|...+.
T Consensus 240 ~v~~-~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~ 273 (342)
T 2x4g_A 240 LLTG-HN-LEMADLTRRIAELLGQPAPQ-PMSMAMAR 273 (342)
T ss_dssp EECC-EE-EEHHHHHHHHHHHHTCCCCE-EECHHHHH
T ss_pred EEcC-Cc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHH
Confidence 8875 44 99999999999999998887 88876543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=231.43 Aligned_cols=216 Identities=13% Similarity=0.078 Sum_probs=170.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|+|||| ||||+++++.|+++|++|++++|+ +.+. ..+...+++++.+|+.|.+ ++++|+|||+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~-----~~~~---~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-----PDQM---EAIRASGAEPLLWPGEEPS-----LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESC-----GGGH---HHHHHTTEEEEESSSSCCC-----CTTCCEEEEC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcC-----hhhh---hhHhhCCCeEEEecccccc-----cCCCCEEEEC
Confidence 589999998 999999999999999999999998 3333 3444578999999999955 7899999999
Q ss_pred ccchh--hhhHHHHHHHHHH--cCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHHHHHc-CCCEEE
Q 021596 84 VGHAL--LADQVKIIAAIKE--AGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRAVEAE-GIPYTY 151 (310)
Q Consensus 84 a~~~~--~~~~~~~~~aa~~--~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~l~~~-~~~~~i 151 (310)
++... ...+.+++++|++ .+ +++||+ |+ |+.... .++.+..| .+.|+.+|..+|++++.. ++++++
T Consensus 71 a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~i 148 (286)
T 3ius_A 71 TAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTP-TAARGRWRVMAEQQWQAVPNLPLHV 148 (286)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCC-CSHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred CCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCC-CCHHHHHHHHHHHHHHhhcCCCEEE
Confidence 98764 3456899999998 66 899988 43 544322 12213333 678999999999999998 999999
Q ss_pred EecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHH
Q 021596 152 VESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSL 231 (310)
Q Consensus 152 ~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~ 231 (310)
+||+.+++.....+... ..+....+.+. +..++|++++|+|++++.+++++. .+++||++++. .+|+.|+++.
T Consensus 149 lRp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~~-~~s~~e~~~~ 221 (286)
T 3ius_A 149 FRLAGIYGPGRGPFSKL----GKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDDE-PVPPQDVIAY 221 (286)
T ss_dssp EEECEEEBTTBSSSTTS----SSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCSC-CBCHHHHHHH
T ss_pred EeccceECCCchHHHHH----hcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCCC-CccHHHHHHH
Confidence 99999998754433222 33444455544 577899999999999999998876 57789998654 8999999999
Q ss_pred HHHHhCCCcee
Q 021596 232 WERKIGKTLER 242 (310)
Q Consensus 232 ~~~~~g~~~~~ 242 (310)
+.+.+|.+.+.
T Consensus 222 i~~~~g~~~~~ 232 (286)
T 3ius_A 222 AAELQGLPLPP 232 (286)
T ss_dssp HHHHHTCCCCC
T ss_pred HHHHcCCCCCc
Confidence 99999987553
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=235.86 Aligned_cols=220 Identities=16% Similarity=0.160 Sum_probs=174.7
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC-CCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ-VDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~-~d~ 79 (310)
|+ ||+|+||| +||||+++++.|+++|++|++++|+.+.. ..+++++.+|+.|.+++.+++++ +|+
T Consensus 1 M~-~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~ 66 (286)
T 3gpi_A 1 MS-LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEI 66 (286)
T ss_dssp -C-CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSE
T ss_pred CC-CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCE
Confidence 65 67999999 59999999999999999999999984421 46899999999999999999997 999
Q ss_pred EEEcccchh----------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHHH
Q 021596 80 VISTVGHAL----------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 80 Vi~~a~~~~----------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
|||+|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+.. +.+.|+.+|..+|++
T Consensus 67 vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~-p~~~Y~~sK~~~E~~- 143 (286)
T 3gpi_A 67 LVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPI-AKDFSGKRMLEAEAL- 143 (286)
T ss_dssp EEECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCC-CCSHHHHHHHHHHHH-
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCC-CCChhhHHHHHHHHH-
Confidence 999998643 677999999999988 999988 43 554321 1221333 367899999999999
Q ss_pred HHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC--ccCCceEEEcCCC
Q 021596 143 EAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP--RTLNKNLYIQPPG 220 (310)
Q Consensus 143 ~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~~~~~~ 220 (310)
++. ++++++||+.++|.....+.... .. . ..++.++..+++++++|+|++++.+++.+ ...+++|+++++
T Consensus 144 ~~~-~~~~ilR~~~v~G~~~~~~~~~~---~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~- 215 (286)
T 3gpi_A 144 LAA-YSSTILRFSGIYGPGRLRMIRQA---QT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN- 215 (286)
T ss_dssp GGG-SSEEEEEECEEEBTTBCHHHHHT---TC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCS-
T ss_pred Hhc-CCeEEEecccccCCCchhHHHHH---Hh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCC-
Confidence 777 99999999999887544333221 11 1 12366788899999999999999999874 446788888754
Q ss_pred CccCHHHHHHHHHHHhCCCceeeec
Q 021596 221 NIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 221 ~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
+.+|+.|+++.+++.+|.+.++...
T Consensus 216 ~~~s~~e~~~~i~~~~g~~~~~~~~ 240 (286)
T 3gpi_A 216 QPLPVHDLLRWLADRQGIAYPAGAT 240 (286)
T ss_dssp CCEEHHHHHHHHHHHTTCCCCCSCC
T ss_pred CCCCHHHHHHHHHHHcCCCCCCCCC
Confidence 4899999999999999988665433
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=234.30 Aligned_cols=229 Identities=20% Similarity=0.219 Sum_probs=173.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|||||||||||+++++.|+++|++|++++|+.+.. ......+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR--------REFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC--------GGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc--------hhhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence 6899999999999999999999999999999985432 1222568999999999999 8888888 9999999
Q ss_pred cchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHHH
Q 021596 85 GHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRAV 142 (310)
Q Consensus 85 ~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~l 142 (310)
+... +.++.+++++|++.+ ++++|+ |+ |+.... .++.+.. +.+.|+.+|..+|+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~-p~~~Y~~sK~~~e~~~ 148 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYK-PISVYGAAKAAGEVMC 148 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCC-CCSHHHHHHHHHHHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCC-CCChHHHHHHHHHHHH
Confidence 8532 667889999999998 999888 43 443221 1221333 4688999999999988
Q ss_pred HH----cCCCEEEEecceeccccccc-----cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC---CccC
Q 021596 143 EA----EGIPYTYVESYCFDGYFLPN-----LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD---PRTL 210 (310)
Q Consensus 143 ~~----~~~~~~i~rp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~ 210 (310)
+. .+++++++||+.+++..... +..... .....+..+++++..++++|++|+|++++.+++. +...
T Consensus 149 ~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 226 (312)
T 3ko8_A 149 ATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLR--RNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226 (312)
T ss_dssp HHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHH--HCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHH--hCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence 65 58999999999888764221 111000 1124566788888999999999999999999987 4446
Q ss_pred CceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHH
Q 021596 211 NKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEE 248 (310)
Q Consensus 211 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 248 (310)
+++||+.++ +.+|+.|+++.+.+.+|.+.++...|..
T Consensus 227 ~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 263 (312)
T 3ko8_A 227 FLALNVGNV-DAVRVLDIAQIVAEVLGLRPEIRLVPST 263 (312)
T ss_dssp EEEEEESCS-SCEEHHHHHHHHHHHHTCCCEEEEC---
T ss_pred CcEEEEcCC-CceeHHHHHHHHHHHhCCCCceeecCcc
Confidence 788888754 4899999999999999998888777654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-32 Score=233.53 Aligned_cols=238 Identities=22% Similarity=0.296 Sum_probs=174.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC------CCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL------SAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~ 76 (310)
|+|+|||||||||+++++.|+++|++|++++|+... . +.....+..+...+++++.+|+.|.+++.++++ +
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSL-PESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSS-BHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccccccccc-HHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 899999999999999999999999999999987542 1 112221222224578999999999999999998 8
Q ss_pred CCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHH
Q 021596 77 VDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 77 ~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~ 133 (310)
+|+|||+|+... +.++.+++++|++.+ +++||+ |+ |+.. .++.. +..|..+.|+.
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~-~~~p~~~~Y~~ 159 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAH-PTGGCTNPYGK 159 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTS-CCCCCSSHHHH
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCC-CCCCCCCchHH
Confidence 999999998642 567889999999988 899888 43 4432 11222 33333678999
Q ss_pred HHHHHHHHHHHc---C--CCEEEEecceeccccccccCC-------CCC-----CC-C-CCCeEEEec------CCCcee
Q 021596 134 VKARIRRAVEAE---G--IPYTYVESYCFDGYFLPNLLQ-------PGA-----AA-P-PRDKVVILG------DGNPKA 188 (310)
Q Consensus 134 ~K~~~e~~l~~~---~--~~~~i~rp~~~~~~~~~~~~~-------~~~-----~~-~-~~~~~~~~~------~~~~~~ 188 (310)
+|..+|++++.. + ++++++||+.+++........ ..+ .. . .+..+.+++ +++..+
T Consensus 160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 239 (348)
T 1ek6_A 160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239 (348)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEE
Confidence 999999998652 4 999999998887752110000 000 00 1 234455555 567889
Q ss_pred EeeccchHHHHHHHHhcCCc-cCC-ceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 189 VYNKEDDIATYTIKAVDDPR-TLN-KNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~-~~~-~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+|++++|+|++++.+++.+. ..+ ++||++++ +.+|+.|+++.+.+.+|.+.++...|
T Consensus 240 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 298 (348)
T 1ek6_A 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYKVVA 298 (348)
T ss_dssp CEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred eeEEHHHHHHHHHHHHhcccccCCceEEEeCCC-CCccHHHHHHHHHHHhCCCCceeeCC
Confidence 99999999999999997642 234 78888754 58999999999999999887665554
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-32 Score=232.45 Aligned_cols=231 Identities=19% Similarity=0.313 Sum_probs=173.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
||+|+|||||||||+++++.|+++|++|++++|+.... . +.+ ..+++++.+|+.|.+++.++++ ++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-E------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-G------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-h------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 67999999999999999999999999999999975432 1 122 2378999999999999999998 899999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~ 138 (310)
|+|+... +.++.+++++|++.+ +++||+ |+ |+... ++.+ +. .+.+.|+.+|..+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~-~~-~~~~~Y~~sK~~~ 149 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEET-MT-NPTNTYGETKLAI 149 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTS-CC-CCSSHHHHHHHHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCC-CC-CCCChHHHHHHHH
Confidence 9998642 567889999999988 899888 44 43321 1222 22 2367899999999
Q ss_pred HHHHHH----cCCCEEEEecceeccccccccCC------CCC-----C-CC-CCCeEEEec------CCCceeEeeccch
Q 021596 139 RRAVEA----EGIPYTYVESYCFDGYFLPNLLQ------PGA-----A-AP-PRDKVVILG------DGNPKAVYNKEDD 195 (310)
Q Consensus 139 e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~------~~~-----~-~~-~~~~~~~~~------~~~~~~~~i~~~D 195 (310)
|++++. .+++++++||+.+++........ ..+ . .. ....+.+++ +++..++|++++|
T Consensus 150 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D 229 (330)
T 2c20_A 150 EKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED 229 (330)
T ss_dssp HHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred HHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence 999875 48999999999888763211100 000 0 01 123455555 5778899999999
Q ss_pred HHHHHHHHhcCCcc--CCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 196 IATYTIKAVDDPRT--LNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 196 ~a~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+|++++.+++.+.. .+++||+++ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus 230 va~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 281 (330)
T 2c20_A 230 LVAAHFLGLKDLQNGGESDFYNLGN-GNGFSVKEIVDAVREVTNHEIPAEVAP 281 (330)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCC-TTCBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHHHhccccCCCCCeEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence 99999999976432 357888864 458999999999999999887766554
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-32 Score=235.60 Aligned_cols=238 Identities=16% Similarity=0.203 Sum_probs=176.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcC--CCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQ--VDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~--~d~V 80 (310)
||+|||||||||||+++++.|+++|++|++++|+.... .......+.. .+++++.+|+.|.+++.+++++ +|+|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG---ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC 77 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT---HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccC---chhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence 57999999999999999999999999999999863221 1111223322 3589999999999999999997 9999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCcc-EEcc-CC---CCCCcc-------------------ccC
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVT-RFFP-SE---FGNDVD-------------------RAH 121 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~-~~v~-s~---~~~~~~-------------------~~~ 121 (310)
||+|+... +.++.+++++|++.+ ++ +||+ |+ |+.... .++
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~ 156 (347)
T 1orr_A 78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES 156 (347)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence 99998632 567889999999998 75 8887 43 442111 011
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCC-----C-CCCCCC-----eEEEecCCCc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPG-----A-AAPPRD-----KVVILGDGNP 186 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~-----~-~~~~~~-----~~~~~~~~~~ 186 (310)
...++.+.|+.+|..+|++++. .+++++++||+.+++.......... . ....+. .+..+++++.
T Consensus 157 -~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 235 (347)
T 1orr_A 157 -TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ 235 (347)
T ss_dssp -SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred -CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcc
Confidence 1122467899999999999876 4899999999998876432110000 0 001122 4667788899
Q ss_pred eeEeeccchHHHHHHHHhcC-CccCCceEEEcCCC-CccCHHHHHHHHHHHhCCCceeeecC
Q 021596 187 KAVYNKEDDIATYTIKAVDD-PRTLNKNLYIQPPG-NIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 187 ~~~~i~~~D~a~~~~~~l~~-~~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
.+++++++|+|++++.+++. +...+++|++.++. ..+|+.|+++.+.+.+|.+.++...|
T Consensus 236 ~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 297 (347)
T 1orr_A 236 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP 297 (347)
T ss_dssp EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred eEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCC
Confidence 99999999999999999986 23457789987543 15999999999999999987766655
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.8e-31 Score=231.86 Aligned_cols=237 Identities=15% Similarity=0.158 Sum_probs=177.2
Q ss_pred CceEEEEccCcchhHHHHHHHHh--CCCCEEEEEcCCCCCC-----CchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK--AGHPTFVLVRESTLSA-----PSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~~-----~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~ 75 (310)
+|+|||||||||||+++++.|++ .|++|++++|+.+... .........+...+++++.+|+.|.+++.++ ..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 57999999999999999999999 9999999999754110 0000111233455789999999999999999 77
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc---cccCCCCCCcchhhHHHH
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV---DRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~---~~~~~~~~~~~~~y~~~K 135 (310)
++|+|||+|+... +.++.+++++|++.+ ++ ||+ |+ |+... .+.. +.. +.+.|+.+|
T Consensus 90 ~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~-~~~-p~~~Y~~sK 165 (362)
T 3sxp_A 90 HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGK-NES-PENVYGFSK 165 (362)
T ss_dssp CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTS-CCC-CSSHHHHHH
T ss_pred CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCC-CCC-CCChhHHHH
Confidence 9999999998543 677899999999998 77 776 43 44422 1222 333 367899999
Q ss_pred HHHHHHHHHcC--CCEEEEecceecccccccc------CCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 136 ARIRRAVEAEG--IPYTYVESYCFDGYFLPNL------LQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 136 ~~~e~~l~~~~--~~~~i~rp~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
..+|++++... ++++++||+.+++...... ..... ....+....++++++..+++++++|+|++++.+++.
T Consensus 166 ~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~ 245 (362)
T 3sxp_A 166 LCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA 245 (362)
T ss_dssp HHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc
Confidence 99999999865 7899999977776432110 00000 003455566778888999999999999999999987
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHH
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEE 248 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 248 (310)
+. .| +||++++ +.+|+.|+++.+.+.+| +.++...|..
T Consensus 246 ~~-~g-~~~i~~~-~~~s~~e~~~~i~~~~g-~~~~~~~~~~ 283 (362)
T 3sxp_A 246 QK-SG-VYNVGYS-QARSYNEIVSILKEHLG-DFKVTYIKNP 283 (362)
T ss_dssp SS-CE-EEEESCS-CEEEHHHHHHHHHHHHC-CCEEECCC--
T ss_pred CC-CC-EEEeCCC-CCccHHHHHHHHHHHcC-CCceEECCCC
Confidence 75 34 8888755 48999999999999999 7777766653
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-31 Score=229.04 Aligned_cols=227 Identities=16% Similarity=0.204 Sum_probs=171.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|||||||||||+++++.|+++| .++++.|..... . .....+++++.+|+.| +++.++++++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~----~----~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGN----E----EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCC----G----GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCC----h----hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence 5799999999999999999999999 566666553321 1 1124578999999999 9999999999999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRA 141 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~ 141 (310)
|+... +.++.+++++|++.+ ++++|+ |+ |+.... .++.+. ++.+.|+.+|..+|++
T Consensus 71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~sK~~~e~~ 148 (313)
T 3ehe_A 71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPT-HPISLYGASKLACEAL 148 (313)
T ss_dssp CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHHHHH
T ss_pred CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCC-CCCCHHHHHHHHHHHH
Confidence 98532 667889999999998 899888 44 443211 112133 3467899999999998
Q ss_pred HHH----cCCCEEEEecceeccccccc-----cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCc
Q 021596 142 VEA----EGIPYTYVESYCFDGYFLPN-----LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNK 212 (310)
Q Consensus 142 l~~----~~~~~~i~rp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 212 (310)
++. .+++++++||+.++|..... +..... .....+.++++++..++|++++|+|++++.+++.+ ..++
T Consensus 149 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~ 225 (313)
T 3ehe_A 149 IESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLK--RNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVN 225 (313)
T ss_dssp HHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHH--HCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEE
T ss_pred HHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHH--cCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCc
Confidence 864 58999999999988764221 111000 11245678888899999999999999999999843 3567
Q ss_pred eEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 213 NLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 213 ~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+||++++ +.+|+.|+++.+++.+|.+.++...+
T Consensus 226 ~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 258 (313)
T 3ehe_A 226 IFNIGSE-DQIKVKRIAEIVCEELGLSPRFRFTG 258 (313)
T ss_dssp EEECCCS-CCEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred eEEECCC-CCeeHHHHHHHHHHHhCCCCceEECC
Confidence 8888754 48999999999999999987766655
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=218.91 Aligned_cols=207 Identities=18% Similarity=0.178 Sum_probs=155.7
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+.||+|+||||||+||+++++.|+++|++|++++|+.+.. ..+ ..+++++.+|+.|.+++.++++++|+|
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v 71 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI--------KIE-NEHLKVKKADVSSLDEVCEVCKGADAV 71 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC--------CCC-CTTEEEECCCTTCHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc--------hhc-cCceEEEEecCCCHHHHHHHhcCCCEE
Confidence 88889999999999999999999999999999999994432 111 268999999999999999999999999
Q ss_pred EEcccchh---------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccc-----cCCCCCCcchhhHHHHHHHHHHHH--
Q 021596 81 ISTVGHAL---------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDR-----AHGAVEPAKSVYYDVKARIRRAVE-- 143 (310)
Q Consensus 81 i~~a~~~~---------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~-----~~~~~~~~~~~y~~~K~~~e~~l~-- 143 (310)
||+++... +.++.+++++|++.+ +++||+ |+.+..... .+.+.. +.+.|+.+|...|.+++
T Consensus 72 i~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~-p~~~Y~~sK~~~e~~~~~~ 149 (227)
T 3dhn_A 72 ISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEV-PENILPGVKALGEFYLNFL 149 (227)
T ss_dssp EECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCS-CGGGHHHHHHHHHHHHHTG
T ss_pred EEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcc-hHHHHHHHHHHHHHHHHHH
Confidence 99998762 678999999999998 999998 554322111 121333 36789999999996664
Q ss_pred --HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCC
Q 021596 144 --AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGN 221 (310)
Q Consensus 144 --~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~ 221 (310)
+.+++++++||+.+++........ ..+....+.. ++. +++++++|+|++++.+++++...+++|++++++
T Consensus 150 ~~~~~~~~~ilrp~~v~g~~~~~~~~-----~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~- 221 (227)
T 3dhn_A 150 MKEKEIDWVFFSPAADMRPGVRTGRY-----RLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLE- 221 (227)
T ss_dssp GGCCSSEEEEEECCSEEESCCCCCCC-----EEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCS-
T ss_pred hhccCccEEEEeCCcccCCCccccce-----eecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeeh-
Confidence 368999999999987753221000 0111112221 222 799999999999999999998899999999766
Q ss_pred ccCHH
Q 021596 222 IYSFN 226 (310)
Q Consensus 222 ~~s~~ 226 (310)
+.+++
T Consensus 222 ~~~~~ 226 (227)
T 3dhn_A 222 HHHHH 226 (227)
T ss_dssp CCC--
T ss_pred hcccC
Confidence 67764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=226.52 Aligned_cols=233 Identities=15% Similarity=0.143 Sum_probs=177.9
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEcc-CCCHHHHHHHhcCC
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGD-VLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D-~~d~~~~~~~~~~~ 77 (310)
|++ +|+|+||||||+||+++++.|+++|++|++++|+.+. .. ...+. ..+++++.+| ++|++++.++++++
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~-~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~ 74 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-----LI-AEELQAIPNVTLFQGPLLNNVPLMDTLFEGA 74 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS-----HH-HHHHHTSTTEEEEESCCTTCHHHHHHHHTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCCh-----hh-HHHHhhcCCcEEEECCccCCHHHHHHHHhcC
Confidence 554 5899999999999999999999999999999998432 21 12222 2478999999 99999999999999
Q ss_pred CEEEEcccchh---hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEe
Q 021596 78 DVVISTVGHAL---LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVE 153 (310)
Q Consensus 78 d~Vi~~a~~~~---~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~r 153 (310)
|+|||+++... .....+++++|++.+++++||+ |+.+.... . + . ....|+.+|..+|+++++.+++++++|
T Consensus 75 d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~--~-~-~-~~~~y~~sK~~~E~~~~~~gi~~~ivr 149 (352)
T 1xgk_A 75 HLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY--G-P-W-PAVPMWAPKFTVENYVRQLGLPSTFVY 149 (352)
T ss_dssp SEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT--S-S-C-CCCTTTHHHHHHHHHHHTSSSCEEEEE
T ss_pred CEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcccccc--C-C-C-CCccHHHHHHHHHHHHHHcCCCEEEEe
Confidence 99999987642 3445999999998864789988 54431111 1 1 1 235677999999999999999999999
Q ss_pred cceeccccccccCCCCCCC-CCCCeE--EEecCCCceeEeecc-chHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHH
Q 021596 154 SYCFDGYFLPNLLQPGAAA-PPRDKV--VILGDGNPKAVYNKE-DDIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFND 227 (310)
Q Consensus 154 p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e 227 (310)
|++|+++....+....... ...+.. .++++++..++++++ +|+|++++.+++++ ...+++|++. ++ .+|+.|
T Consensus 150 pg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~-~~-~~s~~e 227 (352)
T 1xgk_A 150 AGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT-FE-TLSPVQ 227 (352)
T ss_dssp ECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC-SE-EECHHH
T ss_pred cceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe-cC-CCCHHH
Confidence 9998877643321111000 123333 346678889999999 89999999999765 2357889997 44 799999
Q ss_pred HHHHHHHHhCCCceeeecC
Q 021596 228 LVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 228 ~~~~~~~~~g~~~~~~~~~ 246 (310)
+++.+++.+|++.++..+|
T Consensus 228 ~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 228 VCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp HHHHHHHHHTSCEEEEECS
T ss_pred HHHHHHHHHCCCCceEECC
Confidence 9999999999998888888
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-31 Score=230.47 Aligned_cols=234 Identities=18% Similarity=0.153 Sum_probs=175.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhh---hcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
||+|||||||||||+++++.|+++|++|++++|+.+.. ..+...+ +.+ ...+++++.+|+.|.+++.++++++|+
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 67999999999999999999999999999999985422 1111111 111 136899999999999999999999999
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~ 137 (310)
|||+|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+. .+.+.|+.+|..
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~-~~~~~Y~~sK~~ 183 (352)
T 1sb8_A 106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIG-KPLSPYAVTKYV 183 (352)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCC-CCCSHHHHHHHH
T ss_pred EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCC-CCCChhHHHHHH
Confidence 999998532 567889999999988 899987 43 433211 122122 236789999999
Q ss_pred HHHHHHH----cCCCEEEEecceecccccccc------CCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFLPNL------LQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|++++. .+++++++||+.+++...... ..... ....+..+.++++++..++|++++|+|++++.++..
T Consensus 184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 9999864 589999999999887643211 00000 002244456778888899999999999999998876
Q ss_pred -CccCCceEEEcCCCCccCHHHHHHHHHHHh---CCCce
Q 021596 207 -PRTLNKNLYIQPPGNIYSFNDLVSLWERKI---GKTLE 241 (310)
Q Consensus 207 -~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~---g~~~~ 241 (310)
+...+++||+.++ +.+|+.|+++.+.+.+ |.+.+
T Consensus 264 ~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 264 GLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYH 301 (352)
T ss_dssp CGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCceEEeCCC-CCccHHHHHHHHHHHHHhcCCCCC
Confidence 3446788888755 4899999999999999 88755
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-31 Score=227.18 Aligned_cols=224 Identities=20% Similarity=0.211 Sum_probs=172.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++|++|++++|..... . ..+ ..+++++.+|+.|.+++.++++ ++|+|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~----~---~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK----R---ENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC----G---GGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc----h---hhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 5899999999999999999999999999999853221 1 111 2468899999999999999998 8999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC----CCC-----CccccCCCCCCcchhhHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE----FGN-----DVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~----~~~-----~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
+++... +.++.+++++|++.+ ++++|+ |+ |+. +..+.. +.. +.+.|+.+|..
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~-~~~-~~~~Y~~sK~~ 149 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETW-PPR-PKSPYAASKAA 149 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTS-CCC-CCSHHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCC-CCC-CCChHHHHHHH
Confidence 998532 566889999999988 899887 44 343 111222 222 36789999999
Q ss_pred HHHHHHH----cCCCEEEEecceeccccccc---------cCCCCCCCCCCCeEEEe-----cCCCceeEeeccchHHHH
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFLPN---------LLQPGAAAPPRDKVVIL-----GDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~ 199 (310)
+|++++. .+++++++||+.+++..... +.... ..+....++ ++++..++|++++|+|++
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 226 (311)
T 2p5y_A 150 FEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERV---LKGLPVTLYARKTPGDEGCVRDYVYVGDVAEA 226 (311)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHH---HHTCCEEEECSSSTTSCCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHH---HcCCCcEEEecccCCCCCeEEeeEEHHHHHHH
Confidence 9998864 58999999999888754221 11100 123445556 777888999999999999
Q ss_pred HHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 200 TIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 200 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++.+++.+ ++.||+.++ +.+|+.|+++.+.+.+|.+.++...|
T Consensus 227 ~~~~~~~~---~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 269 (311)
T 2p5y_A 227 HALALFSL---EGIYNVGTG-EGHTTREVLMAVAEAAGKAPEVQPAP 269 (311)
T ss_dssp HHHHHHHC---CEEEEESCS-CCEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHhCC---CCEEEeCCC-CCccHHHHHHHHHHHhCCCCCceeCC
Confidence 99999764 678888754 48999999999999999887665554
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-31 Score=230.74 Aligned_cols=232 Identities=19% Similarity=0.222 Sum_probs=174.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|+.||+|+|||||||||+++++.|+++ |++|++++|+.... ....+..+...+++++.+|+.|.+++.++++++|
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 77 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG---NKANLEAILGDRVELVVGDIADAELVDKLAAKAD 77 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC---CGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC---ChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCC
Confidence 777899999999999999999999998 89999999975322 1112233334678999999999999999999999
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---------------ccCCCC
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---------------RAHGAV 124 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---------------~~~~~~ 124 (310)
+|||+|+... +.++.+++++|.+.+ + +||+ |+ ||.... .++ ..
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-~~ 154 (348)
T 1oc2_A 78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-TN 154 (348)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-SC
T ss_pred EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCC-CC
Confidence 9999998642 566899999999998 7 8777 43 443210 111 12
Q ss_pred CCcchhhHHHHHHHHHHHHH----cCCCEEEEecceecccccc--ccCCCCC-CCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLP--NLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.++.+.|+.+|..+|++++. .+++++++||+.+++.... .+..... ....+....++++++..+++++++|+|
T Consensus 155 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 234 (348)
T 1oc2_A 155 YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS 234 (348)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence 23467899999999998865 4899999999998876432 1100000 002234456678888899999999999
Q ss_pred HHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 198 TYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
++++.+++.+. .+++|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 235 ~~~~~~~~~~~-~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 235 TGVWAILTKGR-MGETYLIGAD-GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp HHHHHHHHHCC-TTCEEEECCS-CEEEHHHHHHHHHHHTTCCT
T ss_pred HHHHHHhhCCC-CCCeEEeCCC-CCCCHHHHHHHHHHHhCCCc
Confidence 99999997553 5778998754 48999999999999999864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-31 Score=227.25 Aligned_cols=225 Identities=12% Similarity=0.141 Sum_probs=174.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi 81 (310)
+|+|||||||||||+++++.|+++|++|++++|+.... . + +++++.+|+.|.+++.+++++ +|+||
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--------~-l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK--------L-P---NVEMISLDIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC--------C-T---TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc--------c-c---eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 68999999999999999999999999999999984321 1 1 788999999999999999985 99999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC--cc---ccCCCCCCcchhhHHHHHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND--VD---RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~--~~---~~~~~~~~~~~~y~~~K~~ 137 (310)
|+|+... +.++.+++++|++.+.+++||+ |+ |+.. .. .++ ...++.+.|+.+|..
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-~~~~~~~~Y~~sK~~ 158 (321)
T 2pk3_A 80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-NQLRPMSPYGVSKAS 158 (321)
T ss_dssp ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-SCCBCCSHHHHHHHH
T ss_pred EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-CCCCCCCccHHHHHH
Confidence 9998642 5668899999987622789887 43 4432 11 112 122346789999999
Q ss_pred HHHHHHHc----CCCEEEEecceeccccccc------cCCCCCCCCC---C--CeEEEecCCCceeEeeccchHHHHHHH
Q 021596 138 IRRAVEAE----GIPYTYVESYCFDGYFLPN------LLQPGAAAPP---R--DKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 138 ~e~~l~~~----~~~~~i~rp~~~~~~~~~~------~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+|++++.. +++++++||+.+++..... +.... .. + .....+++++..+++++++|+|++++.
T Consensus 159 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 235 (321)
T 2pk3_A 159 VGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQI---VDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL 235 (321)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHH---HHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHH---HHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence 99998764 8999999999888764321 11100 11 2 345677788889999999999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+++.+. .+++|++.++ +.+|+.|+++.+.+.+|.+.++...|
T Consensus 236 ~~~~~~-~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p 277 (321)
T 2pk3_A 236 LSQYGK-TGDVYNVCSG-IGTRIQDVLDLLLAMANVKIDTELNP 277 (321)
T ss_dssp HHHHCC-TTCEEEESCS-CEEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred HHhCCC-CCCeEEeCCC-CCeeHHHHHHHHHHHhCCCCceeecc
Confidence 997663 5678888754 48999999999999999987766554
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-32 Score=237.23 Aligned_cols=231 Identities=14% Similarity=0.093 Sum_probs=173.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
||+|+|||||||||+++++.|+++| ++|++++|+.... . +.+. ..+++++.+|+.|++++.++++++|+||
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~------~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE-K------INVPDHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC-G------GGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc-h------hhccCCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 5789999999999999999999999 9999999985432 1 1121 4578999999999999999999999999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHc-CCccEEcc-CC---CCCCcc---c--cCCC---CC-CcchhhH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEA-GNVTRFFP-SE---FGNDVD---R--AHGA---VE-PAKSVYY 132 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~-~~v~~~v~-s~---~~~~~~---~--~~~~---~~-~~~~~y~ 132 (310)
|+|+... +.++.+++++|++. + +++||+ |+ |+.... . ++ . .. .+.+.|+
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~-~~~~~~~~~~~~Y~ 182 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATEE-TDIVSLHNNDSPYS 182 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------CC-CCCCCSSCCCSHHH
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCcccc-cccccccCCCCchH
Confidence 9998642 56789999999998 7 899988 33 443211 0 11 1 11 3367899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEecceeccccc---------c------ccCCCCC-CCCCCCeEEEecCCCceeEeec
Q 021596 133 DVKARIRRAVEA----EGIPYTYVESYCFDGYFL---------P------NLLQPGA-AAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~---------~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
.+|..+|++++. .+++++++||+.+++... . .+..... ....+..+.++++++..+++++
T Consensus 183 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 262 (377)
T 2q1s_A 183 MSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF 262 (377)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEE
Confidence 999999998865 489999999999887643 1 1000000 0023344556677788999999
Q ss_pred cchHHHH-HHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 193 EDDIATY-TIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 193 ~~D~a~~-~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++|+|++ ++.+++.+. .+ +|++.++ +.+|+.|+++.+.+.+|.+.++...|
T Consensus 263 v~Dva~a~i~~~~~~~~-~g-~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p 314 (377)
T 2q1s_A 263 VEDVANGLIACAADGTP-GG-VYNIASG-KETSIADLATKINEITGNNTELDRLP 314 (377)
T ss_dssp HHHHHHHHHHHHHHCCT-TE-EEECCCC-CCEEHHHHHHHHHHHHTCCSCCCCCC
T ss_pred HHHHHHHHHHHHHhcCC-CC-eEEecCC-CceeHHHHHHHHHHHhCCCCCceeCC
Confidence 9999999 999998765 44 7888754 58999999999999999887655544
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-31 Score=229.58 Aligned_cols=232 Identities=14% Similarity=0.166 Sum_probs=172.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcC--CCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQ--VDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~--~d~V 80 (310)
+|+|+|||||||||+++++.|+++|++|++++|+.... .... ..+ ...+++++.+|+.|++++.+++++ +|+|
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLF---ETARVADGMQSEIGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHH---HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCccc-chhh---HhhccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence 47999999999999999999999999999999985443 1111 111 135789999999999999999986 8999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~~~~~~~~y~~~K~~ 137 (310)
||+|+... +.++.+++++|++.+.+++||+ |+ |+.... .++ ...++.+.|+.+|..
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-~~~~~~~~Y~~sK~~ 163 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-EAMGGYDPYSNSKGC 163 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-SCBCCSSHHHHHHHH
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-CCCCCCCccHHHHHH
Confidence 99998421 5678899999998754788887 44 443211 111 122246789999999
Q ss_pred HHHHHHHc-------------CCCEEEEecceecccccc-------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 138 IRRAVEAE-------------GIPYTYVESYCFDGYFLP-------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 138 ~e~~l~~~-------------~~~~~i~rp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
+|++++.. +++++++||+.+++.... .+.... ..+..+ .++.++..++|++++|+|
T Consensus 164 ~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 164 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAF---EQSQPV-IIRNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHH---HTTCCE-ECSCTTCEECCEETHHHH
T ss_pred HHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHH---hcCCCE-EECCCCCeeccEeHHHHH
Confidence 99988653 899999999998875321 111110 123333 344567889999999999
Q ss_pred HHHHHHhcC----CccCCceEEEcCC-CCccCHHHHHHHHHHHhCCCceeee
Q 021596 198 TYTIKAVDD----PRTLNKNLYIQPP-GNIYSFNDLVSLWERKIGKTLEREY 244 (310)
Q Consensus 198 ~~~~~~l~~----~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~ 244 (310)
++++.+++. +...+++||++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 291 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL 291 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc
Confidence 999998863 2345788888753 3589999999999999998866543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=231.71 Aligned_cols=229 Identities=15% Similarity=0.135 Sum_probs=177.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|+|||||||||+++++.|+++|++|++++|+.... ......+++++.+|+.|.+++.++++++|+|||+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~ 100 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH--------MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL 100 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS--------SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc--------hhhccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence 68999999999999999999999999999999985432 1122457899999999999999999999999999
Q ss_pred ccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc---------cccCCCCCCcchhhHHH
Q 021596 84 VGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV---------DRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 84 a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~---------~~~~~~~~~~~~~y~~~ 134 (310)
|+... +.++.+++++|++.+ +++||+ |+ |+... .+.+.....+.+.|+.+
T Consensus 101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s 179 (379)
T 2c5a_A 101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE 179 (379)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence 98531 456789999999988 899887 43 44211 11110022235789999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceeccccccc----------cCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHH
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPN----------LLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
|..+|++++. .+++++++||+.+++..... +.... ..+.. +.++++++..+++++++|+|++
T Consensus 180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (379)
T 2c5a_A 180 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKA---QTSTDRFEMWGDGLQTRSFTFIDECVEG 256 (379)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHH---HHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHH---HhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence 9999998854 58999999999988764321 11100 12333 6777888889999999999999
Q ss_pred HHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 200 TIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 200 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
++.+++.+ .++.||+.++ +.+|+.|+++.+.+.+|.+.++..+|.
T Consensus 257 i~~~l~~~--~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~ 301 (379)
T 2c5a_A 257 VLRLTKSD--FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPG 301 (379)
T ss_dssp HHHHHHSS--CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECC
T ss_pred HHHHhhcc--CCCeEEeCCC-CccCHHHHHHHHHHHhCCCCceeeCCC
Confidence 99999876 4678999865 489999999999999998877666553
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=224.30 Aligned_cols=225 Identities=17% Similarity=0.221 Sum_probs=173.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhC---C---CCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA---G---HPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~---g---~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+|+|||||||||+++++.|+++ | ++|++++|+.......+. ..+. ..+++++.+|+.|.+++.+++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL---APVDADPRLRFVHGDIRDAGLLARELRGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG---GGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh---hhcccCCCeEEEEcCCCCHHHHHHHhcCC
Confidence 58999999999999999999997 8 999999997532211111 2221 357899999999999999999999
Q ss_pred CEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHH
Q 021596 78 DVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 78 d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~ 134 (310)
|+|||+|+... +.++.+++++|++.+ +++||+ |+ |+... .+.. +. ++.+.|+.+
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~-~~-~~~~~Y~~s 154 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESS-PL-EPNSPYAAS 154 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTS-CC-CCCSHHHHH
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCC-CC-CCCCchHHH
Confidence 99999998642 567899999999998 889887 43 54321 1222 22 236789999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceecccccc------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLP------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
|..+|++++. .+++++++||+.+++.... .+.... ..+..+.++++++..+++++++|+|++++.++
T Consensus 155 K~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 231 (337)
T 1r6d_A 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNL---LDGGTLPLYGDGANVREWVHTDDHCRGIALVL 231 (337)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHH---HTTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHH---hcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHH
Confidence 9999998864 5899999999988875421 111110 23445677788888999999999999999999
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+.+. .+++|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 232 ~~~~-~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 232 AGGR-AGEIYHIGGG-LELTNRELTGILLDSLGADW 265 (337)
T ss_dssp HHCC-TTCEEEECCC-CEEEHHHHHHHHHHHHTCCG
T ss_pred hCCC-CCCEEEeCCC-CCccHHHHHHHHHHHhCCCc
Confidence 7653 5678898754 48999999999999999874
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-31 Score=214.91 Aligned_cols=202 Identities=18% Similarity=0.268 Sum_probs=167.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.|+|+||||||+||+++++.|+++|++|++++|+ +++. ..+...++ +++.+|++ +++.+++.++|+|||
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~-----~~~~---~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN-----EEQG---PELRERGASDIVVANLE--EDFSHAFASIDAVVF 90 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGH---HHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC-----hHHH---HHHHhCCCceEEEcccH--HHHHHHHcCCCEEEE
Confidence 5799999999999999999999999999999998 4333 34445688 99999998 778888999999999
Q ss_pred cccchh-----------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEE
Q 021596 83 TVGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYT 150 (310)
Q Consensus 83 ~a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~ 150 (310)
+++... +.++.+++++|++.+ +++||+ |+++....... + ++...|+.+|..+|++++..+++++
T Consensus 91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~-~--~~~~~Y~~sK~~~e~~~~~~gi~~~ 166 (236)
T 3e8x_A 91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQG-P--MNMRHYLVAKRLADDELKRSSLDYT 166 (236)
T ss_dssp CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGS-C--GGGHHHHHHHHHHHHHHHHSSSEEE
T ss_pred CCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCC-h--hhhhhHHHHHHHHHHHHHHCCCCEE
Confidence 999753 667899999999998 999998 88876544322 2 3578899999999999999999999
Q ss_pred EEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHH
Q 021596 151 YVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVS 230 (310)
Q Consensus 151 i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~ 230 (310)
++||+.++++.. .+.......++...++++++|+|++++.+++++...++.|++.++ ..++.|+++
T Consensus 167 ~lrpg~v~~~~~------------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~--~~~~~e~~~ 232 (236)
T 3e8x_A 167 IVRPGPLSNEES------------TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG--DTPIAKVVE 232 (236)
T ss_dssp EEEECSEECSCC------------CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC--SEEHHHHHH
T ss_pred EEeCCcccCCCC------------CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC--CcCHHHHHH
Confidence 999999988632 223344445555689999999999999999988777889999754 589999998
Q ss_pred HHH
Q 021596 231 LWE 233 (310)
Q Consensus 231 ~~~ 233 (310)
.++
T Consensus 233 ~i~ 235 (236)
T 3e8x_A 233 QLG 235 (236)
T ss_dssp TC-
T ss_pred Hhc
Confidence 765
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=230.43 Aligned_cols=239 Identities=20% Similarity=0.290 Sum_probs=172.6
Q ss_pred CceEEEEccCcchhHHHHHHHH-hCCCCEEEEEcCCCCCC----Cc-hhhH---hHhhh----cCC---cEEEEccCCCH
Q 021596 4 KSKILSIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSA----PS-KSQL---LDHFK----NLG---VNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~----~~-~~~~---~~~l~----~~~---~~~v~~D~~d~ 67 (310)
.|+|||||||||||+++++.|+ ++|++|++++|+..... .. .... ++.+. ..+ ++++.+|+.|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 99999999999743210 00 1111 11111 124 89999999999
Q ss_pred HHHHHHhc--C-CCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc--------
Q 021596 68 ESLVNAIK--Q-VDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV-------- 117 (310)
Q Consensus 68 ~~~~~~~~--~-~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~-------- 117 (310)
+++.++++ + +|+|||+|+... +.++.+++++|++.+ +++||+ |+ |+...
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccc
Confidence 99999998 6 999999998642 567889999999988 899887 33 43322
Q ss_pred ---cccCCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceecccccc-----------ccCCCCC-----CCCC
Q 021596 118 ---DRAHGAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLP-----------NLLQPGA-----AAPP 174 (310)
Q Consensus 118 ---~~~~~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-----------~~~~~~~-----~~~~ 174 (310)
.+.. +. .+.+.|+.+|+.+|++++. .+++++++||+.+++.... .+..... ....
T Consensus 161 ~~~~E~~-~~-~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 161 EPIDINA-KK-SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCBCTTS-CC-BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cCcCccC-CC-CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 1111 22 2357899999999998865 4899999999988875321 1100000 0011
Q ss_pred C------------CeEEEec------CCCceeEeeccchHHHHHHHHhcCCccCC--------ceEEEcCCCCccCHHHH
Q 021596 175 R------------DKVVILG------DGNPKAVYNKEDDIATYTIKAVDDPRTLN--------KNLYIQPPGNIYSFNDL 228 (310)
Q Consensus 175 ~------------~~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~~~~~--------~~~~~~~~~~~~s~~e~ 228 (310)
+ ..+.+++ +++..++|+|++|+|++++.+++.+...+ ++||+++ ++.+|+.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~ 317 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-SRGYSVREV 317 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-SCCEEHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC-CCcccHHHH
Confidence 2 2355665 67888999999999999999997643222 6888875 458999999
Q ss_pred HHHHHHHhCCCceeeecC
Q 021596 229 VSLWERKIGKTLEREYVS 246 (310)
Q Consensus 229 ~~~~~~~~g~~~~~~~~~ 246 (310)
++.+.+.+|.+.++...+
T Consensus 318 ~~~i~~~~g~~~~~~~~~ 335 (397)
T 1gy8_A 318 IEVARKTTGHPIPVRECG 335 (397)
T ss_dssp HHHHHHHHCCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeeeCC
Confidence 999999999887665544
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=223.96 Aligned_cols=232 Identities=19% Similarity=0.199 Sum_probs=170.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+ +|+|||||||||||+++++.|+++| ++|++++|+....... .+..+. ..+++++.+|+.|.+++.+++.++
T Consensus 1 M~-~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 76 (336)
T 2hun_A 1 MH-SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPA---NLKDLEDDPRYTFVKGDVADYELVKELVRKV 76 (336)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG---GGTTTTTCTTEEEEECCTTCHHHHHHHHHTC
T ss_pred CC-CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchh---HHhhhccCCceEEEEcCCCCHHHHHHHhhCC
Confidence 55 3689999999999999999999997 8999999974321111 112221 357899999999999999999999
Q ss_pred CEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHHH
Q 021596 78 DVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 78 d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~ 134 (310)
|+|||+|+... +.++.+++++|.+.+..++||+ |+ ||.. .++.. +. ++.+.|+.+
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~-~~-~~~~~Y~~s 154 (336)
T 2hun_A 77 DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEND-RL-MPSSPYSAT 154 (336)
T ss_dssp SEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTB-CC-CCCSHHHHH
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCC-CC-CCCCccHHH
Confidence 99999998642 5678899999999872368887 43 4432 11122 22 346789999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceeccccccc--cCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPN--LLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|..+|++++. .+++++++||+.+++..... +..... ....+..+.++++++..+++++++|+|++++.+++.+
T Consensus 155 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 234 (336)
T 2hun_A 155 KAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG 234 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 9999998865 58999999999988764311 000000 0023445677788888899999999999999998765
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
. .+++|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 235 ~-~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 265 (336)
T 2hun_A 235 E-SREIYNISAG-EEKTNLEVVKIILRLMGKGE 265 (336)
T ss_dssp C-TTCEEEECCS-CEECHHHHHHHHHHHTTCCS
T ss_pred C-CCCEEEeCCC-CcccHHHHHHHHHHHhCCCc
Confidence 3 5678888754 48999999999999999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=230.28 Aligned_cols=223 Identities=17% Similarity=0.219 Sum_probs=167.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-hhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|+|||||||||+++++.|+++|++|++++|+.+.. ......+. .....+++++.+|+. ++|+|||
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPP-MIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCC-SSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-ccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 68999999999999999999999999999999986521 00110001 111234566666654 8999999
Q ss_pred cccchh--------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC----ccccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND----VDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~----~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|+... +.++.+++++|++.+ +++||+ |+ |+.. ..+.. +.. +.+.|+.+|..+|+
T Consensus 76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~-~~~-p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDS-PLS-PRSPYAASKVGLEM 152 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTS-CCC-CCSHHHHHHHHHHH
T ss_pred CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCC-CCC-CCChhHHHHHHHHH
Confidence 998643 456789999999999 999998 43 4432 12222 333 36789999999999
Q ss_pred HHHH----cCC-CEEEEecceecccccc------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCcc
Q 021596 141 AVEA----EGI-PYTYVESYCFDGYFLP------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRT 209 (310)
Q Consensus 141 ~l~~----~~~-~~~i~rp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 209 (310)
+++. .++ +++++||+.+++.... .+.... ..+..+.++++++..++|++++|+|++++.+++++..
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~ 229 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANL---LTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP 229 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHH---HHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHH---HcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC
Confidence 9876 588 9999999998876422 111110 2345677888899999999999999999999988764
Q ss_pred CCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 210 LNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 210 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
| +||++++ +.+|+.|+++.+. .+|.+.++...|.
T Consensus 230 -g-~~~i~~~-~~~s~~e~~~~i~-~~g~~~~~~~~~~ 263 (321)
T 3vps_A 230 -S-VVNFGSG-QSLSVNDVIRILQ-ATSPAAEVARKQP 263 (321)
T ss_dssp -S-EEEESCS-CCEEHHHHHHHHH-TTCTTCEEEEECC
T ss_pred -C-eEEecCC-CcccHHHHHHHHH-HhCCCCccccCCC
Confidence 5 8888755 4899999999999 9999988776554
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=223.49 Aligned_cols=220 Identities=16% Similarity=0.145 Sum_probs=168.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
|+|+|||||||||+++++.|+++ |++|++++|+.+.. . + ..+++++.+|+.|.+++.++++ ++|+|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~v 72 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT--------D-V-VNSGPFEVVNALDFNQIEHLVEVHKITDI 72 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC--------H-H-HHSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc--------c-c-cCCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence 79999999999999999999999 89999999985421 1 1 1367899999999999999998 89999
Q ss_pred EEcccchh--------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCCCCCcchhhHHHHHHH
Q 021596 81 ISTVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 81 i~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~~~~~~~~y~~~K~~~ 138 (310)
||+|+... +.++.+++++|++.+ +++||+ |+ |+.... .++.+.. +.+.|+.+|..+
T Consensus 73 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~-~~~~Y~~sK~~~ 150 (312)
T 2yy7_A 73 YLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIME-PSTVYGISKQAG 150 (312)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCC-CCSHHHHHHHHH
T ss_pred EECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCC-CCchhHHHHHHH
Confidence 99998642 467889999999988 899988 33 443211 1221222 367899999999
Q ss_pred HHHHHH----cCCCEEEEecceeccccc-ccc------CCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 139 RRAVEA----EGIPYTYVESYCFDGYFL-PNL------LQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 139 e~~l~~----~~~~~~i~rp~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|++++. .+++++++||+.+++... +.. .........++....+++++..++|++++|+|++++.+++.+
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 230 (312)
T 2yy7_A 151 ERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230 (312)
T ss_dssp HHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 998864 489999999998887432 110 000000023455667778888999999999999999999876
Q ss_pred cc---CCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 208 RT---LNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 208 ~~---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
.. .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus 231 ~~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 231 VEKIKIHSSYNLAA--MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp GGGCCCSSCEECCS--EEECHHHHHHHHHTTCTT
T ss_pred ccccccCceEEeCC--CccCHHHHHHHHHHHCCC
Confidence 53 247888863 589999999999999983
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-31 Score=225.06 Aligned_cols=221 Identities=17% Similarity=0.213 Sum_probs=168.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d 78 (310)
|+ +|+|+|||||||||+++++.|+++|++|+++.|+. .+|+.|.+++.++++ ++|
T Consensus 1 M~-~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d 57 (321)
T 1e6u_A 1 MA-KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERID 57 (321)
T ss_dssp -C-CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCS
T ss_pred CC-CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCC
Confidence 44 47999999999999999999999999999988761 379999999999999 999
Q ss_pred EEEEcccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCC---CCCCcchhh
Q 021596 79 VVISTVGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHG---AVEPAKSVY 131 (310)
Q Consensus 79 ~Vi~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~---~~~~~~~~y 131 (310)
+|||+|+... +.++.+++++|++.+ +++||+ |+ |+... .+... +..|..+.|
T Consensus 58 ~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y 136 (321)
T 1e6u_A 58 QVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 136 (321)
T ss_dssp EEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred EEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCcc
Confidence 9999998642 567889999999998 899888 44 44321 11110 122323689
Q ss_pred HHHHHHHHHHHHH----cCCCEEEEecceeccccccc------cCCCCCCCC-----CC-CeEEEecCCCceeEeeccch
Q 021596 132 YDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPN------LLQPGAAAP-----PR-DKVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 132 ~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~------~~~~~~~~~-----~~-~~~~~~~~~~~~~~~i~~~D 195 (310)
+.+|..+|++++. .+++++++||+.++|..... +........ .+ ..+.++++++..++|++++|
T Consensus 137 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~D 216 (321)
T 1e6u_A 137 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD 216 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHH
Confidence 9999999999876 48999999999988754321 100000001 11 35667788899999999999
Q ss_pred HHHHHHHHhcCCccC--------CceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 196 IATYTIKAVDDPRTL--------NKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~--------~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+|++++.+++.+... +++||++++ +.+|+.|+++.+.+.+|.+.++...+
T Consensus 217 va~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 274 (321)
T 1e6u_A 217 MAAASIHVMELAHEVWLENTQPMLSHINVGTG-VDCTIRELAQTIAKVVGYKGRVVFDA 274 (321)
T ss_dssp HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS-CCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred HHHHHHHHHhCcccccccccccCCceEEeCCC-CCccHHHHHHHHHHHhCCCCceEeCC
Confidence 999999999876542 578998754 48999999999999999987766554
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=224.33 Aligned_cols=223 Identities=17% Similarity=0.142 Sum_probs=167.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi 81 (310)
||+|||||||||||+++++.|+++|+ +... ...+++.+.+|+.|.+++.+++++ +|+||
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi 66 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDTAQTRALFEKVQPTHVI 66 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence 68999999999999999999999998 2100 122455568999999999999986 99999
Q ss_pred Ecccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccC---CCCCCcchhhHHH
Q 021596 82 STVGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAH---GAVEPAKSVYYDV 134 (310)
Q Consensus 82 ~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~---~~~~~~~~~y~~~ 134 (310)
|+|+... +.++.+++++|++.+ +++||+ |+ |+... .+.. .+..|....|+.+
T Consensus 67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s 145 (319)
T 4b8w_A 67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYA 145 (319)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHH
T ss_pred ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHH
Confidence 9998632 667889999999998 999988 54 44321 1111 0223323369999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceeccccccc----------cCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPN----------LLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
|..+|++++. .+++++++||+.++|..... +..... ....+..+.++++++..++|++++|+|++
T Consensus 146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 225 (319)
T 4b8w_A 146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL 225 (319)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHH
Confidence 9999998865 68999999999988764321 111000 00235567888889999999999999999
Q ss_pred HHHHhcCCc-cCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 200 TIKAVDDPR-TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 200 ~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
++.+++.+. ..+++||+++ ++.+|+.|+++.+.+.+|.+.++...+.
T Consensus 226 ~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 273 (319)
T 4b8w_A 226 FIWVLREYNEVEPIILSVGE-EDEVSIKEAAEAVVEAMDFHGEVTFDTT 273 (319)
T ss_dssp HHHHHHHCCCSSCEEECCCG-GGCEEHHHHHHHHHHHTTCCSCEEEETT
T ss_pred HHHHHhccccCCceEEEecC-CCceeHHHHHHHHHHHhCCCCcEEeCCC
Confidence 999997643 3456777764 4589999999999999999877665543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=217.81 Aligned_cols=238 Identities=20% Similarity=0.312 Sum_probs=169.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++|++|+++.|..... +.....+..+...+++++.+|+.|.+++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcc-hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 5899999999999999999999999999998764332 222222222223568899999999999999987 5999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+... +.++.+++++|++.+ ++++|+ |+ |+... .+.. +..|..+.|+.+|..+|
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~-~~~~~~~~Y~~sK~~~e 157 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESF-PTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTS-CCCCCSSHHHHHHHHHH
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCccc-CCCCCCChHHHHHHHHH
Confidence 998532 567889999999988 889888 43 44321 1112 22233678999999999
Q ss_pred HHHHH----c-CCCEEEEecceeccccccccCC-C------CCC-------CCCCCeEEEec------CCCceeEeeccc
Q 021596 140 RAVEA----E-GIPYTYVESYCFDGYFLPNLLQ-P------GAA-------APPRDKVVILG------DGNPKAVYNKED 194 (310)
Q Consensus 140 ~~l~~----~-~~~~~i~rp~~~~~~~~~~~~~-~------~~~-------~~~~~~~~~~~------~~~~~~~~i~~~ 194 (310)
++++. . +++++++||+.++|........ . .+. ......+.+++ +++..++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 98865 3 7899999987766542110000 0 000 00122344443 466789999999
Q ss_pred hHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 195 DIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 195 D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
|+|++++.+++.+ ...+++||+++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 238 Dva~a~~~~l~~~~~~~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T 1udb_A 238 DLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHHhhhhccCCCcEEEecC-CCceeHHHHHHHHHHHhCCCCcceeCC
Confidence 9999999988653 22236788875 458999999999999999887665544
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-30 Score=222.47 Aligned_cols=229 Identities=15% Similarity=0.164 Sum_probs=170.0
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcC--CCE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQ--VDV 79 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~--~d~ 79 (310)
++|+|||||||||||+++++.|+++|++|++++|+.+.... ..+..+ ...+++++.+|+.|.+++.+++++ +|+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR---WRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC---HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc---cchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 36899999999999999999999999999999998553211 111222 234689999999999999999985 799
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcCCc-cEEcc-CC---CCCCc----cccCCCCCCcchhhHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAGNV-TRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v-~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K 135 (310)
|||+|+... +.++.+++++|++.+ + ++||+ |+ |+... .+.. +..| .+.|+.+|
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~-~~~p-~~~Y~~sK 166 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENT-PFYP-RSPYGVAK 166 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTS-CCCC-CSHHHHHH
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCccc-CCCC-CChhHHHH
Confidence 999998632 456889999999987 6 88887 43 44321 2222 3333 67899999
Q ss_pred HHHHHHHHH----cCCCEEEEecceecccccc-cc----CCCCCC-CCCCC-eEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDGYFLP-NL----LQPGAA-APPRD-KVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-~~----~~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
..+|++++. .+++++++||+.+++.... .+ ....+. ...+. ....+++++..++|++++|+|++++.++
T Consensus 167 ~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 246 (335)
T 1rpn_A 167 LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML 246 (335)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence 999998865 4899999998777664221 11 000000 01222 3345688889999999999999999999
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+.+. +++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 247 ~~~~--~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~ 279 (335)
T 1rpn_A 247 QQDK--ADDYVVATG-VTTTVRDMCQIAFEHVGLDY 279 (335)
T ss_dssp HSSS--CCCEEECCS-CEEEHHHHHHHHHHTTTCCG
T ss_pred hcCC--CCEEEEeCC-CCccHHHHHHHHHHHhCCCc
Confidence 8764 478888754 48999999999999999864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=220.34 Aligned_cols=249 Identities=17% Similarity=0.151 Sum_probs=182.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
.|+|||||||||||+++++.|+++|++|++++|+ .+|+.|.+++.++++ ++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 4799999999999999999999999999999986 379999999999998 799999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~ 138 (310)
|+|+... +.++.+++++|++.+ + ++|+ |+ |+... .+.. +.. +.+.|+.+|..+
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~-~~~-~~~~Y~~sK~~~ 144 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFD-EVN-PQSAYGKTKLEG 144 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTS-CCC-CCSHHHHHHHHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCC-CCC-CccHHHHHHHHH
Confidence 9998642 556889999999998 7 8777 43 44321 1222 333 357899999999
Q ss_pred HHHHHHcCCCEEEEecceeccccccccCCCCCC-CCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEc
Q 021596 139 RRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAA-APPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 139 e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~ 217 (310)
|++++..+.+++++||+.++|. -..+...... ...+..+...+ +..+++++++|+|++++.+++++ .+++|++.
T Consensus 145 E~~~~~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~ 219 (292)
T 1vl0_A 145 ENFVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCT 219 (292)
T ss_dssp HHHHHHHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECC
T ss_pred HHHHHhhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEec
Confidence 9999998889999999998865 2211110000 01233444444 57789999999999999999765 57888887
Q ss_pred CCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCC
Q 021596 218 PPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297 (310)
Q Consensus 218 ~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 297 (310)
++ +.+|+.|+++.+.+.+|.+.++..+|...+ +.+. +.......+. .++.+.+ |+
T Consensus 220 ~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~-------------~~~~~~~~d~---~k~~~~l-G~ 274 (292)
T 1vl0_A 220 CK-GICSWYDFAVEIFRLTGIDVKVTPCTTEEF-------PRPA-------------KRPKYSVLRN---YMLELTT-GD 274 (292)
T ss_dssp CB-SCEEHHHHHHHHHHHHCCCCEEEEECSTTS-------CCSS-------------CCCSBCCBCC---HHHHHTT-CC
T ss_pred CC-CCccHHHHHHHHHHHhCCCCceeecccccc-------Cccc-------------CCCccccccH---HHHHHHc-CC
Confidence 54 489999999999999999877766664321 1000 0001122222 2344545 88
Q ss_pred cccCHHHHHHhh
Q 021596 298 KYTTVDEYLNQF 309 (310)
Q Consensus 298 ~~~~~~e~l~~~ 309 (310)
+|++++|+|+++
T Consensus 275 ~p~~~~~~l~~~ 286 (292)
T 1vl0_A 275 ITREWKESLKEY 286 (292)
T ss_dssp CCCBHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 888999999875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=217.42 Aligned_cols=214 Identities=14% Similarity=0.168 Sum_probs=170.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++|++|++++|. ++|+.|.+++.++++ ++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 499999999999999999999999999999995 379999999999998 7999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+... +.++.+++++|++.+ + ++|+ |+ |+... .+.+ +.. +.+.|+.+|..+|
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~-~~~-p~~~Y~~sK~~~E 138 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFH-NPA-PINIYGASKYAGE 138 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTS-CCC-CCSHHHHHHHHHH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCC-CCC-CCCHHHHHHHHHH
Confidence 998653 556889999999998 7 5776 43 44321 1222 333 3678999999999
Q ss_pred HHHHHcCCCEEEEecceeccccccccCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcC
Q 021596 140 RAVEAEGIPYTYVESYCFDGYFLPNLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 140 ~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~ 218 (310)
++++..+.+++++||+.+++.....+..... ....+..+...+ +..+++++++|+|++++.+++++. +++||+++
T Consensus 139 ~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~ 214 (287)
T 3sc6_A 139 QFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSN 214 (287)
T ss_dssp HHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCC
T ss_pred HHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcC
Confidence 9999988899999999988753222111100 002345556554 478999999999999999998875 67888876
Q ss_pred CCCccCHHHHHHHHHHHhCCCceeeecCHHHH
Q 021596 219 PGNIYSFNDLVSLWERKIGKTLEREYVSEEQL 250 (310)
Q Consensus 219 ~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 250 (310)
+. .+|+.|+++.+.+.+|++.++..+|..++
T Consensus 215 ~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 245 (287)
T 3sc6_A 215 TG-SCSWFEFAKKIFSYANMKVNVLPVSTEEF 245 (287)
T ss_dssp BS-CEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred CC-cccHHHHHHHHHHHcCCCcceeeeehhhc
Confidence 54 89999999999999999998888888654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=224.43 Aligned_cols=240 Identities=19% Similarity=0.214 Sum_probs=173.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCC------------chhhHhH---hhhcCCcEEEEccCCCHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP------------SKSQLLD---HFKNLGVNFVVGDVLNHE 68 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~---~l~~~~~~~v~~D~~d~~ 68 (310)
+++|||||||||||+++++.|+++|++|++++|....... ...+.+. .+...+++++.+|+.|.+
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~ 90 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 90 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence 6899999999999999999999999999999986221000 0000111 122457899999999999
Q ss_pred HHHHHhcC--CCEEEEcccchh------------------hhhHHHHHHHHHHcCCc-cEEcc-CC---CCCCccccCC-
Q 021596 69 SLVNAIKQ--VDVVISTVGHAL------------------LADQVKIIAAIKEAGNV-TRFFP-SE---FGNDVDRAHG- 122 (310)
Q Consensus 69 ~~~~~~~~--~d~Vi~~a~~~~------------------~~~~~~~~~aa~~~~~v-~~~v~-s~---~~~~~~~~~~- 122 (310)
++.+++++ +|+|||+|+... +.++.+++++|++.+ + ++||+ |+ |+......+.
T Consensus 91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E~ 169 (404)
T 1i24_A 91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEG 169 (404)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCcc
Confidence 99999987 999999998532 456789999999988 6 58887 44 4432110000
Q ss_pred --------------CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceecccccccc-------------------
Q 021596 123 --------------AVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNL------------------- 165 (310)
Q Consensus 123 --------------~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~------------------- 165 (310)
...++.+.|+.+|..+|++++. .+++++++||+.++|......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~ 249 (404)
T 1i24_A 170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249 (404)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence 0122367899999999998765 489999999999887643110
Q ss_pred CCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC--ceEEEcCCCCccCHHHHHHHHHHH---hCCC
Q 021596 166 LQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN--KNLYIQPPGNIYSFNDLVSLWERK---IGKT 239 (310)
Q Consensus 166 ~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~---~g~~ 239 (310)
..... ....+..+.++++++..++|++++|+|++++.+++.+...+ ++||+++ +.+|+.|+++.+.+. +|.+
T Consensus 250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--EEEEHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--CCCcHHHHHHHHHHHHHhhCCC
Confidence 00000 00223456677888899999999999999999998765445 6888864 489999999999998 7887
Q ss_pred ceeeecC
Q 021596 240 LEREYVS 246 (310)
Q Consensus 240 ~~~~~~~ 246 (310)
.++...|
T Consensus 328 ~~~~~~p 334 (404)
T 1i24_A 328 VKKMTVP 334 (404)
T ss_dssp CCEEEEC
T ss_pred ccccccC
Confidence 6655444
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=205.52 Aligned_cols=198 Identities=20% Similarity=0.202 Sum_probs=157.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC-HHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN-HESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~~~~~~~~~d~Vi~~ 83 (310)
|+|+||||||+||+++++.|+++|++|++++|+.+.. .. ..+++++.+|+.| .+++.++++++|+|||+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------~~--~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV--------PQ--YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS--------CC--CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch--------hh--cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 5899999999999999999999999999999994322 11 1689999999999 99999999999999999
Q ss_pred ccchh-------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccc-cCCCCCCcchhhHHHHHHHHHHH-HHcCCCEEEEe
Q 021596 84 VGHAL-------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDR-AHGAVEPAKSVYYDVKARIRRAV-EAEGIPYTYVE 153 (310)
Q Consensus 84 a~~~~-------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~-~~~~~~~~~~~y~~~K~~~e~~l-~~~~~~~~i~r 153 (310)
++... +.++.+++++|++.+ ++++|+ |+.+..... .......+...|+.+|..+|+++ +..+++++++|
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr 149 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ 149 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence 99764 677999999999998 999988 553332111 10000112578999999999999 77899999999
Q ss_pred cceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHH
Q 021596 154 SYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVS 230 (310)
Q Consensus 154 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~ 230 (310)
|+.++++... +... . ++...++++++|+|++++.+++++...+++|++.+ + ..++.|++.
T Consensus 150 p~~v~g~~~~------------~~~~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~-g-~~~~~e~~~ 209 (219)
T 3dqp_A 150 PGALTEEEAT------------GLID-I--NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHN-G-KTAIKEALE 209 (219)
T ss_dssp ECSEECSCCC------------SEEE-E--SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEE-C-SEEHHHHHH
T ss_pred CceEecCCCC------------Cccc-c--CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCC-C-CccHHHHHH
Confidence 9999886321 1122 2 26678999999999999999998877788999964 3 488888876
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-30 Score=220.64 Aligned_cols=227 Identities=16% Similarity=0.264 Sum_probs=168.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|||||||||||+++++.|+++|++|++++|+.... .... .......+++++.+|+.|. ++.++|+|||+
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~ 98 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNV--EHWIGHENFELINHDVVEP-----LYIEVDQIYHL 98 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGT--GGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhh--hhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence 68999999999999999999999999999999975432 1111 1111235789999999875 36789999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccC----CCCCCcchhhHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAH----GAVEPAKSVYYDVKA 136 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~----~~~~~~~~~y~~~K~ 136 (310)
|+... +.++.+++++|++.+ + ++|+ |+ |+... .+.. .+. .+.+.|+.+|.
T Consensus 99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~-~~~~~Y~~sK~ 175 (343)
T 2b69_A 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPI-GPRACYDEGKR 175 (343)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSS-STTHHHHHHHH
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCC-CCCCchHHHHH
Confidence 98542 556889999999988 6 6666 43 43321 1110 022 23578999999
Q ss_pred HHHHHHHH----cCCCEEEEecceeccccccc--------cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 137 RIRRAVEA----EGIPYTYVESYCFDGYFLPN--------LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~rp~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|++++. .+++++++||+.+++..... +... ...+..+.++++++..+++++++|+|++++.++
T Consensus 176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~ 252 (343)
T 2b69_A 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQ---ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 252 (343)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHH---HHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHH---HHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHH
Confidence 99998754 58999999999888764211 1110 023455677888888999999999999999999
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
+.+ .++.||++++. .+|+.|+++.+.+.+|.+.++...|.
T Consensus 253 ~~~--~~~~~~i~~~~-~~s~~e~~~~i~~~~g~~~~~~~~p~ 292 (343)
T 2b69_A 253 NSN--VSSPVNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 292 (343)
T ss_dssp TSS--CCSCEEESCCC-EEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred hcC--CCCeEEecCCC-CCcHHHHHHHHHHHhCCCCCceeCCC
Confidence 765 36789997554 89999999999999999877666553
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=233.24 Aligned_cols=244 Identities=16% Similarity=0.154 Sum_probs=177.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-----------hhhcCCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-----------HFKNLGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-----------~l~~~~~~~v~~D~~d~~~~~~ 72 (310)
+|+||||||||+||+++++.|++.|++|++++|+.... .......+ .....+++++.+|+.|++++.
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE-IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHH-HHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChH-HHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 67999999999999999999999999999999984311 00000101 112468999999999988888
Q ss_pred HhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCC-----------ccccCCC--CCC
Q 021596 73 AIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGND-----------VDRAHGA--VEP 126 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~-----------~~~~~~~--~~~ 126 (310)
++.++|+|||+|+... +.++.+++++|.+ + +++||+ |+.+.. ..+.+ + ..+
T Consensus 147 ~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~-~~~~~~ 223 (427)
T 4f6c_A 147 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD-VYKGQL 223 (427)
T ss_dssp CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTC-SCSSCC
T ss_pred CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccc-cccCCC
Confidence 7779999999998753 6778999999999 6 789887 443320 11111 1 022
Q ss_pred cchhhHHHHHHHHHHHHH---cCCCEEEEecceeccccccccCCCC---------CCC-CCCCeEEEecCCCceeEeecc
Q 021596 127 AKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGYFLPNLLQPG---------AAA-PPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~i~~ 193 (310)
+.+.|+.+|+.+|+++++ .|++++++||+.+++.......... ... ...+.+. .+.++..++|+++
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v 302 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFV 302 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEH
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeH
Confidence 468899999999999987 7999999999999886543221100 000 1122222 2345788999999
Q ss_pred chHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHhcCCC
Q 021596 194 DDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPP 260 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 260 (310)
+|+|++++.++..+. .+++||+.++. .+++.|+++.+.+ +| +..++.++|...+...+++
T Consensus 303 ~DvA~ai~~~~~~~~-~g~~~~l~~~~-~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~~~~~~ 362 (427)
T 4f6c_A 303 DTTARQIVALAQVNT-PQIIYHVLSPN-KMPVKSLLECVKR-KE----IELVSDESFNEILQKQDMY 362 (427)
T ss_dssp HHHHHHHHHHTTSCC-CCSEEEESCSC-CEEHHHHHHHHHS-SC----CEEECHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHcCCC-CCCEEEecCCC-CCcHHHHHHHHHH-cC----CcccCHHHHHHHHHhcCch
Confidence 999999999998876 78899998655 8999999999998 66 6678888888888776543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=217.62 Aligned_cols=229 Identities=21% Similarity=0.282 Sum_probs=169.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC-HHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN-HESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~~~~~~~~~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++ |++|++++|+.. +.. ......+++++.+|+.| .+.+.++++++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~-----~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih 73 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD-----AIS--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG-----GGG--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcc-----hHH--HhhcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence 58999999999999999999998 899999999843 221 11234578999999998 4678889999999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCC-----CCCCcchhhHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHG-----AVEPAKSVYYDV 134 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~-----~~~~~~~~y~~~ 134 (310)
+|+... +.++.+++++|++.+ ++||+ |+ |+... .+... +...+.+.|+.+
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s 151 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHH
Confidence 998532 446789999999886 67777 54 43321 11110 111234589999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceeccccccccCC----------CCC-CCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQ----------PGA-AAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
|..+|++++. .+++++++||+.++|........ ... ....+..+.++++++..+++++++|+|++
T Consensus 152 K~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 231 (345)
T 2bll_A 152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 231 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHH
Confidence 9999998854 58999999999988764321100 000 00234456677888889999999999999
Q ss_pred HHHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHHhCCCcee
Q 021596 200 TIKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 242 (310)
++.+++.+. ..+++||+.+++..+|+.|+++.+.+.+|.+...
T Consensus 232 ~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~ 276 (345)
T 2bll_A 232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 276 (345)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG
T ss_pred HHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCccc
Confidence 999998764 3577888875433799999999999999876543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-30 Score=217.76 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=150.3
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC-----CCE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ-----VDV 79 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~-----~d~ 79 (310)
+|+|||||||||+++++.|+++| ++|+++.|+.+.. +. ..+. +++ +.+|+.|.+.+.+++++ +|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF---VNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG---GG---HHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCc---hh---hhcC--cce-eccccccHHHHHHHHhccccCCCcE
Confidence 58999999999999999999999 9999999984321 11 1221 333 78999999999999985 999
Q ss_pred EEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHH
Q 021596 80 VISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 80 Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~ 138 (310)
|||+++... +.++.+++++|++.+ + ++|+ |+ |+... ++.. +..| .+.|+.+|..+
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~-~~~p-~~~Y~~sK~~~ 147 (310)
T 1eq2_A 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESRE-YEKP-LNVYGYSKFLF 147 (310)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGG-GCCC-SSHHHHHHHHH
T ss_pred EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCC-CCCC-CChhHHHHHHH
Confidence 999998642 556899999999998 8 8877 43 44322 1122 2333 57899999999
Q ss_pred HHHHHH----cCCCEEEEecceecccccc------ccCCCCC-CCCCCCeEEEecCCCc-eeEeeccchHHHHHHHHhcC
Q 021596 139 RRAVEA----EGIPYTYVESYCFDGYFLP------NLLQPGA-AAPPRDKVVILGDGNP-KAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 139 e~~l~~----~~~~~~i~rp~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~~ 206 (310)
|++++. .+++++++||+.+++.... .+..... ....+..+.++++++. .+++++++|+|++++.++++
T Consensus 148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~ 227 (310)
T 1eq2_A 148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 227 (310)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence 999875 3799999999998876432 1100000 0022344556677778 89999999999999999987
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+. +++||+.++ +.+|+.|+++.+.+.+|.+
T Consensus 228 ~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 228 GV--SGIFNLGTG-RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp CC--CEEEEESCS-CCBCHHHHHHHC-------
T ss_pred CC--CCeEEEeCC-CccCHHHHHHHHHHHcCCC
Confidence 65 788888754 4899999999999999987
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=212.81 Aligned_cols=217 Identities=15% Similarity=0.164 Sum_probs=153.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|||||||||||||++|++.|+++||+|++++|++... -+..| +...+.++++|+|+|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------------~~~~~----~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------------RITWD----ELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------EEEHH----HHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------------eeecc----hhhHhhccCCCEEEEec
Confidence 7899999999999999999999999999999984321 01222 23345678999999999
Q ss_pred cchh-------------------hhhHHHHHHHHHHcCCccE--Ecc-C---CCCCCccc---cCCCCCCcchhhHHHHH
Q 021596 85 GHAL-------------------LADQVKIIAAIKEAGNVTR--FFP-S---EFGNDVDR---AHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 85 ~~~~-------------------~~~~~~~~~aa~~~~~v~~--~v~-s---~~~~~~~~---~~~~~~~~~~~y~~~K~ 136 (310)
+... +.++.++++++++.+ +++ +|+ | .||..... ++.+. ++.+.|+..+.
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~-~~~~~~~~~~~ 137 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPG-GDFDFFSNLVT 137 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCC-SCSSHHHHHHH
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCc-cccchhHHHHH
Confidence 7321 566788999999886 444 665 3 35543221 22122 23456666666
Q ss_pred HHHHHH--HHcCCCEEEEecceeccccc---cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC
Q 021596 137 RIRRAV--EAEGIPYTYVESYCFDGYFL---PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN 211 (310)
Q Consensus 137 ~~e~~l--~~~~~~~~i~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 211 (310)
..|... ...+++++++||+.+++..- ..+... ...+....++++++.++|||++|+++++..+++++. .+
T Consensus 138 ~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~----~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~-~~ 212 (298)
T 4b4o_A 138 KWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLP----FRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH-VH 212 (298)
T ss_dssp HHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHH----HHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT-CC
T ss_pred HHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHH----HhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC-CC
Confidence 665543 34678999999998887532 111111 112233456888999999999999999999998876 45
Q ss_pred ceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHH
Q 021596 212 KNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLL 251 (310)
Q Consensus 212 ~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 251 (310)
++||+++++ ++|+.|+++.+++.+|++.. .++|...++
T Consensus 213 g~yn~~~~~-~~t~~e~~~~ia~~lgrp~~-~pvP~~~~~ 250 (298)
T 4b4o_A 213 GVLNGVAPS-SATNAEFAQTFGAALGRRAF-IPLPSAVVQ 250 (298)
T ss_dssp EEEEESCSC-CCBHHHHHHHHHHHHTCCCC-CCBCHHHHH
T ss_pred CeEEEECCC-ccCHHHHHHHHHHHhCcCCc-ccCCHHHHH
Confidence 689998665 89999999999999998753 457765443
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=217.80 Aligned_cols=208 Identities=17% Similarity=0.159 Sum_probs=159.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+ +|++|++++|+. +.+.+|+.|.+++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 589999999999999999999 899999999972 1347899999999999986 999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e 139 (310)
+++... +.++.+++++|++.+ + +||+ |+ |+... .+.. +..| .+.|+.+|..+|
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~-~~~p-~~~Y~~sK~~~E 136 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETD-ATSP-LNVYGKTKLAGE 136 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTS-CCCC-SSHHHHHHHHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCC-CCCC-ccHHHHHHHHHH
Confidence 998642 566899999999988 7 6776 43 44322 2222 3333 678999999999
Q ss_pred HHHHHcCCCEEEEecceeccccccccCCCCCC-CCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--c-CCceEE
Q 021596 140 RAVEAEGIPYTYVESYCFDGYFLPNLLQPGAA-APPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--T-LNKNLY 215 (310)
Q Consensus 140 ~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~-~~~~~~ 215 (310)
++++....+++++||+.+++.....+...... ...+..+...+ +..+++++++|+|++++.+++++. . .++.||
T Consensus 137 ~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~ 214 (299)
T 1n2s_A 137 KALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH 214 (299)
T ss_dssp HHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred HHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEE
Confidence 99999888999999999887532211110000 01234444554 478999999999999999997652 2 378888
Q ss_pred EcCCCCccCHHHHHHHHHHHhCCC
Q 021596 216 IQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 216 ~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+.++ +.+|+.|+++.+.+.+|.+
T Consensus 215 i~~~-~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 215 LVAG-GTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp CCCB-SCEEHHHHHHHHHHHHHHH
T ss_pred EeCC-CCCCHHHHHHHHHHHhCCC
Confidence 8754 4899999999999999876
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-29 Score=213.36 Aligned_cols=222 Identities=19% Similarity=0.192 Sum_probs=167.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcC--CCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQ--VDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~--~d~V 80 (310)
||+|+|||||||||+++++.|+++|++|++++|+.... . +.+.. .+++++.+|+.|.+++.+++++ +|+|
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~---~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR----R---EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC----G---GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc----h---hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence 68999999999999999999999999999999984322 1 11111 4789999999999999999997 9999
Q ss_pred EEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CC----CCccccCCCCCCcc-hhhHHHHHHHH
Q 021596 81 ISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FG----NDVDRAHGAVEPAK-SVYYDVKARIR 139 (310)
Q Consensus 81 i~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~----~~~~~~~~~~~~~~-~~y~~~K~~~e 139 (310)
||+|+... +.++.+++++|.+.+ +++||+ |+ |+ ......+....| . +.|+.+|..+|
T Consensus 94 ih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p-~~~~Y~~sK~~~E 171 (333)
T 2q1w_A 94 VHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPRNP-ANSSYAISKSANE 171 (333)
T ss_dssp EECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCCCC-TTCHHHHHHHHHH
T ss_pred EECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCCCC-CCCchHHHHHHHH
Confidence 99998642 456889999999988 889887 43 44 211000000023 4 78999999999
Q ss_pred HHHHH-cCCCEEEEecceecccc-----ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 140 RAVEA-EGIPYTYVESYCFDGYF-----LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 140 ~~l~~-~~~~~~i~rp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
++++. .. +++++||+.+++.. .+.+.... ..+. .+++ ++..+++++++|+|++++.+++.+. +++
T Consensus 172 ~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~---~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~ 242 (333)
T 2q1w_A 172 DYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRL---SEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGA 242 (333)
T ss_dssp HHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHH---HTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEE
T ss_pred HHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHH---HcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCE
Confidence 99998 77 99999998777643 11111110 1122 2334 5677899999999999999998765 788
Q ss_pred EEEcCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 214 LYIQPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 214 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
|++.++ +.+|+.|+++.+.+.+|.+ ++...
T Consensus 243 ~~v~~~-~~~s~~e~~~~i~~~~g~~-~~~~~ 272 (333)
T 2q1w_A 243 YHFSSG-TDVAIKELYDAVVEAMALP-SYPEP 272 (333)
T ss_dssp EECSCS-CCEEHHHHHHHHHHHTTCS-SCCCC
T ss_pred EEeCCC-CCccHHHHHHHHHHHhCCC-CceeC
Confidence 888754 4899999999999999987 44333
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=217.29 Aligned_cols=226 Identities=14% Similarity=0.124 Sum_probs=167.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-----QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-----~~d 78 (310)
|+|+|||||||||+++++.|+++| ++|+++.|+.... +. ..+ .++. +.+|+.|.+.+..+++ ++|
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d 117 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF---VNL--VDLN-IADYMDKEDFLIQIMAGEEFGDVE 117 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGG---GG---GGT--TTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcc---hh---hcc--cCce-EeeecCcHHHHHHHHhhcccCCCC
Confidence 789999999999999999999999 9999999974321 11 111 2333 7789999999999987 599
Q ss_pred EEEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHH
Q 021596 79 VVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 79 ~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~ 137 (310)
+|||+|+... +.++.+++++|++.+ + +||+ |+ |+... ++.. +..| .+.|+.+|..
T Consensus 118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~-~~~p-~~~Y~~sK~~ 193 (357)
T 2x6t_A 118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESRE-YEKP-LNVFGYSKFL 193 (357)
T ss_dssp EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGG-GCCC-SSHHHHHHHH
T ss_pred EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcC-CCCC-CChhHHHHHH
Confidence 9999998642 567899999999998 7 8777 43 44321 1122 2233 5789999999
Q ss_pred HHHHHHH----cCCCEEEEecceecccccc------ccCCCCC-CCCCCCeEEEecCCCc-eeEeeccchHHHHHHHHhc
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFLP------NLLQPGA-AAPPRDKVVILGDGNP-KAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~ 205 (310)
+|++++. .+++++++||+.+++.... .+..... ....+..+.++++++. .++|++++|+|++++.+++
T Consensus 194 ~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~ 273 (357)
T 2x6t_A 194 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 273 (357)
T ss_dssp HHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh
Confidence 9999875 3789999999998875422 1100000 0023444566777788 8999999999999999998
Q ss_pred CCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC-ceeeecC
Q 021596 206 DPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT-LEREYVS 246 (310)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~ 246 (310)
.+. +++|++.++ +.+|+.|+++.+.+.+|.+ +++...+
T Consensus 274 ~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 312 (357)
T 2x6t_A 274 NGV--SGIFNLGTG-RAESFQAVADATLAYHKKGQIEYIPFP 312 (357)
T ss_dssp HCC--CEEEEESCS-CCEEHHHHHHHHHHHHTCCCCEEECCC
T ss_pred cCC--CCeEEecCC-CcccHHHHHHHHHHHcCCCCceecCCC
Confidence 765 788888754 4899999999999999987 4444333
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=228.02 Aligned_cols=235 Identities=20% Similarity=0.271 Sum_probs=170.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|+|+|||||||||+++++.|+++|++|++++|+.... ......+..+...+++++.+|+.|.+++.++++ ++|+||
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 47999999999999999999999999999999985432 111212223335678999999999999999998 899999
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc--------cccCCCCCCcchhhHHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV--------DRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~--------~~~~~~~~~~~~~y~~~ 134 (310)
|+|+... +.++.+++++|++.+ ++++|+ |+ |+... .+.. +.. +.+.|+.+
T Consensus 90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~-~~~-p~~~Y~~s 166 (699)
T 1z45_A 90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEEC-PLG-PTNPYGHT 166 (699)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTS-CCC-CCSHHHHH
T ss_pred ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccC-CCC-CCChHHHH
Confidence 9998642 466789999999988 899887 43 43221 1111 222 35789999
Q ss_pred HHHHHHHHHH------cCCCEEEEecceeccccccccC------------CCCCCCC--CCCeEEEec------CCCcee
Q 021596 135 KARIRRAVEA------EGIPYTYVESYCFDGYFLPNLL------------QPGAAAP--PRDKVVILG------DGNPKA 188 (310)
Q Consensus 135 K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~------------~~~~~~~--~~~~~~~~~------~~~~~~ 188 (310)
|+.+|++++. .+++++++||+.+++.....+. ....... .+..+.+++ +++..+
T Consensus 167 K~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 246 (699)
T 1z45_A 167 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 246 (699)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeE
Confidence 9999998865 5899999998888764211100 0000000 112344444 577889
Q ss_pred EeeccchHHHHHHHHhcCC------ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 189 VYNKEDDIATYTIKAVDDP------RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~------~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+|++++|+|++++.+++.+ ...+++||++++ +.+|+.|+++.+++.+|++.++.
T Consensus 247 ~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~ 306 (699)
T 1z45_A 247 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKASGIDLPYK 306 (699)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTCCCCC-
T ss_pred eeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-CCCcHHHHHHHHHHHhCCCCCce
Confidence 9999999999999988642 223568888755 48999999999999999886654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=213.86 Aligned_cols=229 Identities=18% Similarity=0.199 Sum_probs=172.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
|+|||||||||||+++++.|+++ |++|++++|+.... +...+..+ ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG---NLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAV 77 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC---CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCC---chhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 57999999999999999999998 79999999975321 11111222 13478999999999999999998 89999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHc--CCcc-------EEcc-CC---CCCCc-------------cc
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEA--GNVT-------RFFP-SE---FGNDV-------------DR 119 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~--~~v~-------~~v~-s~---~~~~~-------------~~ 119 (310)
||+|+... +.++.+++++|.+. + ++ +||+ |+ ||... -.
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~ 156 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence 99998642 56789999999998 7 77 8887 43 54321 11
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccc--cCCCCC-CCCCCCeEEEecCCCceeEeec
Q 021596 120 AHGAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPN--LLQPGA-AAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 120 ~~~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
++ ...++.+.|+.+|..+|++++. .+++++++||+.+++..... +..... ....+..+.++++++..+++++
T Consensus 157 E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 235 (361)
T 1kew_A 157 ET-TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY 235 (361)
T ss_dssp TT-SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred CC-CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEE
Confidence 11 1223467899999999998865 48999999999988764321 000000 0023445677788888999999
Q ss_pred cchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 193 EDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
++|+|++++.+++.+. .+++|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 236 v~Dva~a~~~~~~~~~-~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 236 VEDHARALHMVVTEGK-AGETYNIGGH-NEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHHHHHHHHHHHHHCC-TTCEEEECCC-CEEEHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCC-CCCEEEecCC-CeeeHHHHHHHHHHHhCCcC
Confidence 9999999999997653 5778888754 48999999999999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=7e-29 Score=201.67 Aligned_cols=202 Identities=16% Similarity=0.225 Sum_probs=139.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+||||||+||+++++.|+++|++|++++|+ +.+. ..+. .+++++.+|+.|.++ +++.++|+|||++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~---~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKI---TQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----SHHH---HHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC-----chhh---hhcc-CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence 689999999999999999999999999999998 4343 2232 789999999999888 7889999999999
Q ss_pred cchh------hhhHHHHHHHHHHcCCccEEcc-CCCCCC----c---cccCCCCCCcchhhHHHHHHHHHH--HH--HcC
Q 021596 85 GHAL------LADQVKIIAAIKEAGNVTRFFP-SEFGND----V---DRAHGAVEPAKSVYYDVKARIRRA--VE--AEG 146 (310)
Q Consensus 85 ~~~~------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~----~---~~~~~~~~~~~~~y~~~K~~~e~~--l~--~~~ 146 (310)
+... ...+.+++++|++.+ ++++|+ |+.+.. . ..++.+.. +...|+.+|...|.+ ++ ..+
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~-~~~~y~~~k~~~e~~~~~~~~~~g 147 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLR-EAPYYPTARAQAKQLEHLKSHQAE 147 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC--------------------CCCSCCHHHHHHHHHHHHTTTTT
T ss_pred cCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCC-CHHHHHHHHHHHHHHHHHHhhccC
Confidence 8753 678899999999998 888877 553321 1 01110222 245688899988876 66 679
Q ss_pred CCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHH
Q 021596 147 IPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFN 226 (310)
Q Consensus 147 ~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ 226 (310)
++++++||+.++++.. ..... ......+...+.+ .++++++|+|++++.+++++...++.|+++++. ..+..
T Consensus 148 i~~~ivrp~~v~g~~~-~~~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~-~~~~~ 219 (221)
T 3ew7_A 148 FSWTYISPSAMFEPGE-RTGDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKL-EHHHH 219 (221)
T ss_dssp SCEEEEECSSCCCCC----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred ccEEEEeCcceecCCC-ccCce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCC-ccccc
Confidence 9999999999987611 11101 0222233333333 379999999999999999998889999998766 55544
Q ss_pred H
Q 021596 227 D 227 (310)
Q Consensus 227 e 227 (310)
|
T Consensus 220 ~ 220 (221)
T 3ew7_A 220 H 220 (221)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=215.19 Aligned_cols=227 Identities=15% Similarity=0.156 Sum_probs=163.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-----CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC---
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-----HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--- 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--- 76 (310)
|+|+|||||||||+++++.|+++| ++|++++|+.+... +...+++++.+|+.|.+++.+++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 789999999999999999999999 99999999854321 1245789999999999999999998
Q ss_pred CCEEEEcccchh----------hhhHHHHHHHHHHc--CCccEEc-------c-CC---CCCC------ccccCCCCCCc
Q 021596 77 VDVVISTVGHAL----------LADQVKIIAAIKEA--GNVTRFF-------P-SE---FGND------VDRAHGAVEPA 127 (310)
Q Consensus 77 ~d~Vi~~a~~~~----------~~~~~~~~~aa~~~--~~v~~~v-------~-s~---~~~~------~~~~~~~~~~~ 127 (310)
+|+|||+|+... +.++.+++++|++. + ++++| + |+ ||.. ..+.. +..|.
T Consensus 73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~-~~~~~ 150 (364)
T 2v6g_A 73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL-PRLKY 150 (364)
T ss_dssp CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS-CCCSS
T ss_pred CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccc-cCCcc
Confidence 999999998642 67789999999987 6 88986 4 44 4432 11222 23333
Q ss_pred chhhHHHHHHHHHHHHHcC-CCEEEEecceeccccccccCCC-----CCCCC---CCCeEEEecCCC---ceeEeeccch
Q 021596 128 KSVYYDVKARIRRAVEAEG-IPYTYVESYCFDGYFLPNLLQP-----GAAAP---PRDKVVILGDGN---PKAVYNKEDD 195 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~~~-~~~~i~rp~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~---~~~~~i~~~D 195 (310)
.+.|......++++.+..+ ++++++||+.++|......... ..... .+..+.++++++ ...++++++|
T Consensus 151 ~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~D 230 (364)
T 2v6g_A 151 MNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230 (364)
T ss_dssp CCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHH
T ss_pred chhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHH
Confidence 4456333333333333355 9999999999988643321110 00001 233344556553 3467788899
Q ss_pred HHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 196 IATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+|++++.+++++...+++||++++ +.+|+.|+++.+++.+|.+....
T Consensus 231 va~a~~~~~~~~~~~g~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~ 277 (364)
T 2v6g_A 231 IAEHHIWAAVDPYAKNEAFNVSNG-DVFKWKHFWKVLAEQFGVECGEY 277 (364)
T ss_dssp HHHHHHHHHHCGGGTTEEEEECCS-CCBCHHHHHHHHHHHHTCCBCCC
T ss_pred HHHHHHHHHhCCCCCCceEEecCC-CcCCHHHHHHHHHHHhCCCCCCC
Confidence 999999999887656778999755 48999999999999999876543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=208.26 Aligned_cols=216 Identities=17% Similarity=0.151 Sum_probs=163.2
Q ss_pred eEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|||||||||||+++++.|+++ |++|++++|+.... .+++++.+|+.|.+++.++++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 67 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF 67 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence 5899999999999999999998 79999999984321 157789999999999999998 899999
Q ss_pred Ecccchh--------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccCCCCCCcchhhHHHHHHHH
Q 021596 82 STVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 82 ~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~~~~~~~~~~y~~~K~~~e 139 (310)
|+|+... +.++.+++++|++.+ +++||+ |+ |+... ..++.+.. +.+.|+.+|..+|
T Consensus 68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~-p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITR-PRTMFGVTKIAAE 145 (317)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCC-CCSHHHHHHHHHH
T ss_pred ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCC-CCchHHHHHHHHH
Confidence 9998642 456889999999988 889887 43 44321 11221222 3678999999999
Q ss_pred HHHHH----cCCCEEEEecceeccccc-cccC------CCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 140 RAVEA----EGIPYTYVESYCFDGYFL-PNLL------QPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 140 ~~l~~----~~~~~~i~rp~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
++++. .+++++++||+.+++... +... ........++....++.++..+++++++|+|++++.+++.+.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~ 225 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADR 225 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence 88754 589999999666655321 1100 000000234456667778888999999999999999998764
Q ss_pred c---CCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 209 T---LNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 209 ~---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
. .+++||+.+ +.+|+.|+++.+.+.+|.
T Consensus 226 ~~~~~g~~~~i~~--~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 226 DKLVLRNGYNVTA--YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp GGCSSCSCEECCS--EEECHHHHHHHHHTTCCS
T ss_pred cccccCceEecCC--ccccHHHHHHHHHHHCCc
Confidence 3 247888864 479999999999999983
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=229.14 Aligned_cols=246 Identities=16% Similarity=0.154 Sum_probs=180.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-----------HhhhcCCcEEEEccCCCHHHHH
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-----------DHFKNLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-----------~~l~~~~~~~v~~D~~d~~~~~ 71 (310)
.||+|||||||||||+++++.|++.|++|++++|+.... ....... ......+++++.+|+.|++++.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE-IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHH-HHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChH-HHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 368999999999999999999999999999999984321 0000010 1122468999999999988777
Q ss_pred HHhcCCCEEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCC--C---------ccccCCCC--C
Q 021596 72 NAIKQVDVVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGN--D---------VDRAHGAV--E 125 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~--~---------~~~~~~~~--~ 125 (310)
++.++|+|||+|+... +.++.+++++|++ + +++||+ |+.+. . ..+.+ +. .
T Consensus 228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~-~~~~~ 303 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD-VYKGQ 303 (508)
T ss_dssp -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTC-SCSSB
T ss_pred -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccc-ccccc
Confidence 7779999999998643 7788999999998 5 788887 44332 1 11111 11 1
Q ss_pred CcchhhHHHHHHHHHHHHH---cCCCEEEEecceeccccccccCCCC---------C-CCCCCCeEEEecCCCceeEeec
Q 021596 126 PAKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGYFLPNLLQPG---------A-AAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
.+.+.|+.+|+.+|+++++ .|++++++||+.++|.......... . .....+.++ .+.++..++|++
T Consensus 304 ~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~ 382 (508)
T 4f6l_B 304 LLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSF 382 (508)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEE
T ss_pred cCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEc
Confidence 1467899999999999976 6999999999999886443221100 0 001222222 234688899999
Q ss_pred cchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHhcCCCc
Q 021596 193 EDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQ 261 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (310)
++|+|++++.++..+. .+++||++++. .+++.|+++.+.+.. +..++.++|...+...++++
T Consensus 383 v~DvA~ai~~~~~~~~-~~~~~nl~~~~-~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~~~~~~ 444 (508)
T 4f6l_B 383 VDTTARQIVALAQVNT-PQIIYHVLSPN-KMPVKSLLECVKRKE-----IELVSDESFNEILQKQDMYE 444 (508)
T ss_dssp HHHHHHHHHHHTTBCC-SCSEEEESCSC-EEEHHHHHHHHHSSC-----CEEECHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhCCC-CCCEEEeCCCC-CCCHHHHHHHHHHcC-----CcccCHHHHHHHHHhcCCcc
Confidence 9999999999998776 78899998655 899999999999864 66788888888887765443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=191.90 Aligned_cols=194 Identities=23% Similarity=0.262 Sum_probs=150.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+. |+|+||||||+||+++++.|+++|++|++++|+.+.. ..+...+++++.+|+.|++++.++++++|+|
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 71 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL--------PSEGPRPAHVVVGDVLQAADVDKTVAGQDAV 71 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS--------CSSSCCCSEEEESCTTSHHHHHHHHTTCSEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc--------ccccCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 553 7999999999999999999999999999999984322 1112457999999999999999999999999
Q ss_pred EEcccchh--------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 021596 81 ISTVGHAL--------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTY 151 (310)
Q Consensus 81 i~~a~~~~--------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i 151 (310)
||+++... ..++.+++++|++.+ ++++|+ |+.+....... . ..+...|+.+|..+|+++++.++++++
T Consensus 72 i~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~-~-~~~~~~y~~~K~~~e~~~~~~~i~~~~ 148 (206)
T 1hdo_A 72 IVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK-V-PPRLQAVTDDHIRMHKVLRESGLKYVA 148 (206)
T ss_dssp EECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC-S-CGGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccc-c-cccchhHHHHHHHHHHHHHhCCCCEEE
Confidence 99998653 467899999999998 899987 65433221111 1 114678999999999999999999999
Q ss_pred EecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccchHHHHHHHHhcCCccCCceEEEcCC
Q 021596 152 VESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDDIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 152 ~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
+||+.++++...... ..... +.+ .++++++|+|++++.+++++...++.|++.++
T Consensus 149 lrp~~~~~~~~~~~~-----------~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g 204 (206)
T 1hdo_A 149 VMPPHIGDQPLTGAY-----------TVTLD--GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204 (206)
T ss_dssp ECCSEEECCCCCSCC-----------EEESS--SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred EeCCcccCCCCCcce-----------Eeccc--CCCCCCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence 999998554221100 01111 111 48999999999999999988767889999754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=210.93 Aligned_cols=226 Identities=15% Similarity=0.185 Sum_probs=167.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
.|+|||||||||||+++++.|+++|++|++++|+.... ......+ .+++++.+|+.|.+++.++++ ++|+||
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK----REVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC----GGGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc----hhhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 47999999999999999999999999999999974322 1011111 478999999999999999999 999999
Q ss_pred Ecccchh------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc-----ccCCCCCCcchhhHHHHHHHHH
Q 021596 82 STVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD-----RAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 82 ~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~-----~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
|+|+... +.++.+++++|.+.+ +++||+ |+ |+.... .++ . .+...|+.+|..+|+
T Consensus 94 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~-~--~~~~~Y~~sK~~~e~ 169 (330)
T 2pzm_A 94 HSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSP-T--APFTSYGISKTAGEA 169 (330)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCC-C--CCCSHHHHHHHHHHH
T ss_pred ECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCC-C--CCCChHHHHHHHHHH
Confidence 9998532 466889999999988 889887 43 332210 011 1 136789999999999
Q ss_pred HHHHcCCCEEEEecceecccccc-ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH-HHHHHhcCCccCCceEEEcC
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLP-NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT-YTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~l~~~~~~~~~~~~~~ 218 (310)
+++..+++++++||+.+++.... .+..........+. ..++++. .+++++++|+|+ +++.+++.+. +++|++.+
T Consensus 170 ~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~ 245 (330)
T 2pzm_A 170 FLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVST 245 (330)
T ss_dssp HHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESC
T ss_pred HHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCC
Confidence 99998999999997776654321 11100000001111 3344455 789999999999 9999998764 78888875
Q ss_pred CCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 219 PGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 219 ~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
+ +.+|+.|+++.+.+.+|.+ ++...
T Consensus 246 ~-~~~s~~e~~~~i~~~~g~~-~~~~~ 270 (330)
T 2pzm_A 246 G-EGHSIKEVFDVVLDYVGAT-LAEPV 270 (330)
T ss_dssp S-CCEEHHHHHHHHHHHHTCC-CSSCC
T ss_pred C-CCCCHHHHHHHHHHHhCCC-CceeC
Confidence 4 4899999999999999987 44333
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=210.79 Aligned_cols=219 Identities=9% Similarity=0.074 Sum_probs=150.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi~ 82 (310)
|+|+|||||||||+++++.|+++|++|++++|+.+ + .+ ++.+|+.|.+++.+++++ +|+|||
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~---------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih 66 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA-----R---------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH 66 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC-----C---------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 79999999999999999999999999999998732 1 12 778999999999999985 999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCC---ccccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGND---VDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~---~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|+... +.++.+++++|.+.+ + ++|+ |+ |+.. ..+.. +.. +.+.|+.+|..+|+
T Consensus 67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~-~~~-~~~~Y~~sK~~~e~ 142 (315)
T 2ydy_A 67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREED-IPA-PLNLYGKTKLDGEK 142 (315)
T ss_dssp CC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTS-CCC-CCSHHHHHHHHHHH
T ss_pred CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCC-CCC-CcCHHHHHHHHHHH
Confidence 998642 567899999999988 6 7776 43 4331 11222 233 36789999999999
Q ss_pred HHHHcCCCEEEEecceecccccc---ccCCCCCCC-C-CCCeEEEecCCCceeEeeccchHHHHHHHHhcCC---ccCCc
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLP---NLLQPGAAA-P-PRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP---RTLNK 212 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~---~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~---~~~~~ 212 (310)
+++..+++++++||+.++|.... .+....... . .+..+... ++..+++++++|+|++++.+++++ ...++
T Consensus 143 ~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ 220 (315)
T 2ydy_A 143 AVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKG 220 (315)
T ss_dssp HHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE
T ss_pred HHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCC
Confidence 99999999999999988875432 121111000 1 23334443 467789999999999999998753 23578
Q ss_pred eEEEcCCCCccCHHHHHHHHHHHhCCCce-eeecC
Q 021596 213 NLYIQPPGNIYSFNDLVSLWERKIGKTLE-REYVS 246 (310)
Q Consensus 213 ~~~~~~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~ 246 (310)
+||+.++ +.+|+.|+++.+.+.+|.+.+ +..++
T Consensus 221 ~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 254 (315)
T 2ydy_A 221 TFHWSGN-EQMTKYEMACAIADAFNLPSSHLRPIT 254 (315)
T ss_dssp EEECCCS-CCBCHHHHHHHHHHHTTCCCTTEEEEC
T ss_pred eEEEcCC-CcccHHHHHHHHHHHhCCChhheeccc
Confidence 8888754 489999999999999998754 33443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-28 Score=200.06 Aligned_cols=217 Identities=17% Similarity=0.195 Sum_probs=163.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+||+|+||||+|+||+++++.|+++ |++|++++|+ +.+. ..+ ..+++++.+|+.|.+++.++++++|+|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~-----~~~~---~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~v 73 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGK---EKI-GGEADVFIGDITDADSINPAFQGIDAL 73 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC-----HHHH---HHT-TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC-----CCch---hhc-CCCeeEEEecCCCHHHHHHHHcCCCEE
Confidence 3689999999999999999999999 8999999998 3332 222 457889999999999999999999999
Q ss_pred EEcccchh----------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC-cchh
Q 021596 81 ISTVGHAL----------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP-AKSV 130 (310)
Q Consensus 81 i~~a~~~~----------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~-~~~~ 130 (310)
||+++... +.++.+++++|++.+ ++++|+ |+.+... ... +..+ ....
T Consensus 74 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~-~~~-~~~~~~~~~ 150 (253)
T 1xq6_A 74 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTN-PDH-PLNKLGNGN 150 (253)
T ss_dssp EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTC-TTC-GGGGGGGCC
T ss_pred EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCC-CCC-ccccccchh
Confidence 99998531 356789999999998 899988 5443221 111 1111 1134
Q ss_pred hHHHHHHHHHHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC
Q 021596 131 YYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210 (310)
Q Consensus 131 y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 210 (310)
|+.+|..+|+++++.+++++++||+.++++..... .. .. ..... +++ ...++++++|+|++++.+++++...
T Consensus 151 y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-~~-~~-~~~~~--~~~---~~~~~~~~~Dva~~~~~~~~~~~~~ 222 (253)
T 1xq6_A 151 ILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-EL-LV-GKDDE--LLQ---TDTKTVPRADVAEVCIQALLFEEAK 222 (253)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-CE-EE-ESTTG--GGG---SSCCEEEHHHHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-hh-hc-cCCcC--CcC---CCCcEEcHHHHHHHHHHHHcCcccc
Confidence 77799999999999999999999999988642210 00 00 00000 111 1246999999999999999887666
Q ss_pred CceEEEcCCC--CccCHHHHHHHHHHHhCCC
Q 021596 211 NKNLYIQPPG--NIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 211 ~~~~~~~~~~--~~~s~~e~~~~~~~~~g~~ 239 (310)
+++|++.+++ +.+|+.|+++.+++.+|++
T Consensus 223 g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp TEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred CCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 7899998653 4699999999999998863
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-27 Score=204.75 Aligned_cols=229 Identities=17% Similarity=0.204 Sum_probs=168.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-------hcCCcEEEEccCCCHHHHHHHhcC-
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-------KNLGVNFVVGDVLNHESLVNAIKQ- 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-------~~~~~~~v~~D~~d~~~~~~~~~~- 76 (310)
|+|+|||||||||+++++.|+++|++|++++|+.+.....+. +.+ ...+++++.+|+.|.+++.+++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTT---GGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhH---HHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 689999999999999999999999999999998543211111 222 235789999999999999999985
Q ss_pred -CCEEEEcccchh---------------hhhHHHHHHHHHHcCCc---cEEcc-CC---CCCCc----cccCCCCCCcch
Q 021596 77 -VDVVISTVGHAL---------------LADQVKIIAAIKEAGNV---TRFFP-SE---FGNDV----DRAHGAVEPAKS 129 (310)
Q Consensus 77 -~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v---~~~v~-s~---~~~~~----~~~~~~~~~~~~ 129 (310)
+|+|||+|+... +.++.+++++|++.+ + ++||+ |+ |+... ++.. +.. +.+
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~-~~~-~~~ 178 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETT-PFY-PRS 178 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTS-CCC-CCS
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccC-CCC-CCC
Confidence 799999998632 456789999999988 7 78887 33 44321 2222 333 367
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceecccccc-ccC----CCCCC-CCCCC-eEEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLP-NLL----QPGAA-APPRD-KVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-~~~----~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|..+|++++. .+++++++||..+++.... .+. ...+. ...+. ....+++++..++|++++|+|+
T Consensus 179 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 258 (375)
T 1t2a_A 179 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 258 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence 899999999998865 4899999997665553211 110 00000 01122 2345678888999999999999
Q ss_pred HHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCcee
Q 021596 199 YTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLER 242 (310)
Q Consensus 199 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 242 (310)
+++.+++.+. ++.||++++ +.+|+.|+++.+.+.+|.+.++
T Consensus 259 a~~~~~~~~~--~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~ 299 (375)
T 1t2a_A 259 AMWLMLQNDE--PEDFVIATG-EVHSVREFVEKSFLHIGKTIVW 299 (375)
T ss_dssp HHHHHHHSSS--CCCEEECCS-CCEEHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHhcCC--CceEEEeCC-CcccHHHHHHHHHHHhCCCccc
Confidence 9999998764 478888754 4899999999999999988654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=207.69 Aligned_cols=225 Identities=13% Similarity=0.055 Sum_probs=164.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-------CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-------HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
+|+|+|||||||||+++++.|+++| ++|++++|+.+... .....+++++.+|+.|.+++.++++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 85 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP--------AGFSGAVDARAADLSAPGEAEKLVEA 85 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC--------TTCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc--------cccCCceeEEEcCCCCHHHHHHHHhc
Confidence 5799999999999999999999999 89999999854321 0123468899999999999999995
Q ss_pred CCCEEEEcccchh--------------hhhHHHHHHHHHHcC----CccEEcc-CC---CCCC----ccccCCCCCCcch
Q 021596 76 QVDVVISTVGHAL--------------LADQVKIIAAIKEAG----NVTRFFP-SE---FGND----VDRAHGAVEPAKS 129 (310)
Q Consensus 76 ~~d~Vi~~a~~~~--------------~~~~~~~~~aa~~~~----~v~~~v~-s~---~~~~----~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +.++.+++++|++.+ .+++||+ |+ |+.. .++.. +.. +.+
T Consensus 86 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~-~~~-~~~ 163 (342)
T 2hrz_A 86 RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEF-HTT-PLT 163 (342)
T ss_dssp CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTC-CCC-CSS
T ss_pred CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCC-CCC-Ccc
Confidence 8999999998642 566889999998864 3678887 43 4432 11222 222 367
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceecc-ccccc-----cCCCCC-CCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDG-YFLPN-----LLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~-~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|..+|+++++ .+++++++|++.+++ ..... +..... ....+....++..++...++++++|+|+
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~ 243 (342)
T 2hrz_A 164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVG 243 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHH
Confidence 899999999998865 368899999776664 22110 000000 0023344455555667788999999999
Q ss_pred HHHHHhcCCcc---CCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 199 YTIKAVDDPRT---LNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 199 ~~~~~l~~~~~---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+++.+++.+.. .+++||+. + +.+|+.|+++.+.+.+|.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~ni~-g-~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 244 FLIHGAMIDVEKVGPRRNLSMP-G-LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp HHHHHHHSCHHHHCSCCEEECC-C-EEEEHHHHHHHHHHHHCHHH
T ss_pred HHHHHHhccccccCCccEEEcC-C-CCCCHHHHHHHHHHHcCccc
Confidence 99999987643 46788884 3 47999999999999999764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=207.56 Aligned_cols=230 Identities=13% Similarity=0.135 Sum_probs=164.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhh--hcC-CcEEEEccCCCHHHHHHHhcC--CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF--KNL-GVNFVVGDVLNHESLVNAIKQ--VD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l--~~~-~~~~v~~D~~d~~~~~~~~~~--~d 78 (310)
|+|||||||||||+++++.|+++|++|++++|+.+.....+...+ ... ... +++++.+|+.|.+++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999999999998653111111000 000 012 788999999999999999985 79
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCcc-----EEcc-CC---CCCC---ccccCCCCCCcchhh
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVT-----RFFP-SE---FGND---VDRAHGAVEPAKSVY 131 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~-----~~v~-s~---~~~~---~~~~~~~~~~~~~~y 131 (310)
+|||+|+... +.++.+++++|++.+ ++ +||+ |+ |+.. ..+.. +.. +.+.|
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~-~~~-~~~~Y 185 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETT-PFH-PRSPY 185 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTS-CCC-CCSHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCC-CCC-CCCch
Confidence 9999998642 456889999999987 76 8887 33 4432 12222 333 36789
Q ss_pred HHHHHHHHHHHHH----cCCCEEEEecceeccccc-cccC----CCCCC-CCCCC-eEEEecCCCceeEeeccchHHHHH
Q 021596 132 YDVKARIRRAVEA----EGIPYTYVESYCFDGYFL-PNLL----QPGAA-APPRD-KVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 132 ~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~-~~~~----~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
+.+|..+|++++. .+++++++|+..+++... ..+. ..... ...+. ....+++++..++|++++|+|+++
T Consensus 186 ~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~ 265 (381)
T 1n7h_A 186 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHH
Confidence 9999999998865 488899998655444321 1110 00000 01122 234567788899999999999999
Q ss_pred HHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 201 IKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
+.+++.+. +++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 266 ~~~~~~~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~ 302 (381)
T 1n7h_A 266 WLMLQQEK--PDDYVVATE-EGHTVEEFLDVSFGYLGLNW 302 (381)
T ss_dssp HHHHTSSS--CCEEEECCS-CEEEHHHHHHHHHHHTTCCG
T ss_pred HHHHhCCC--CCeEEeeCC-CCCcHHHHHHHHHHHcCCCc
Confidence 99998764 478888754 48999999999999999863
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=200.64 Aligned_cols=232 Identities=15% Similarity=0.154 Sum_probs=168.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcC--CCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQ--VDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~--~d~V 80 (310)
.|+|+|||||||||+++++.|+++|++|++++|+.+.... ..+..+ ...+++++.+|+.|.+++.+++++ +|+|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 79 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS---WRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEV 79 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT---HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc---ccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 4799999999999999999999999999999998543211 111222 124689999999999999999985 6999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCc-cEEcc-CC---CCCCcc---ccCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNV-TRFFP-SE---FGNDVD---RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v-~~~v~-s~---~~~~~~---~~~~~~~~~~~~y~~~K~~ 137 (310)
||+|+... +.++.+++++|.+.+ + ++||+ |+ ||.... .++.+. ++.+.|+.+|..
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~-~~~~~Y~~sK~~ 157 (345)
T 2z1m_A 80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPF-YPRSPYAVAKLF 157 (345)
T ss_dssp EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHH
T ss_pred EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCC-CCCChhHHHHHH
Confidence 99998632 566899999999887 7 78887 43 443221 111122 346789999999
Q ss_pred HHHHHHH----cCCCEEEEecceeccc-cccccCCC----CCC-CCCCC-eEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGY-FLPNLLQP----GAA-APPRD-KVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~-~~~~~~~~----~~~-~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|++++. .+++++++|+..+++. ........ ... ...+. ....+++++..+++++++|+|++++.+++.
T Consensus 158 ~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~ 237 (345)
T 2z1m_A 158 GHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ 237 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 9998865 4889888885444432 22111000 000 01122 233567778889999999999999999987
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+. ++.||++++ +.+|+.|+++.+.+.+|.+.++.
T Consensus 238 ~~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~ 271 (345)
T 2z1m_A 238 PE--PDDYVIATG-ETHTVREFVEKAAKIAGFDIEWV 271 (345)
T ss_dssp SS--CCCEEECCS-CCEEHHHHHHHHHHHTTCCEEEE
T ss_pred CC--CceEEEeCC-CCccHHHHHHHHHHHhCCCcccc
Confidence 64 478888754 58999999999999999986543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=207.26 Aligned_cols=211 Identities=18% Similarity=0.203 Sum_probs=163.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CC-CEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GH-PTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~-~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+|+|+||||||+||+++++.|+++ |+ +|++++|+ +.+... ...+...+++++.+|++|.+++.++++++|+|
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~-----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD-----ELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC-----HHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC-----hhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 579999999999999999999999 97 99999998 333321 22333468999999999999999999999999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA 144 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~ 144 (310)
||+|+... +.++.+++++|.+.+ ++++|+ |+... .. +.+.|+.+|+.+|++++.
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~--------~~-p~~~Y~~sK~~~E~~~~~ 165 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKA--------AN-PINLYGATKLCSDKLFVS 165 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGG--------SS-CCSHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCcc--------CC-CccHHHHHHHHHHHHHHH
Confidence 99998642 567789999999998 999998 55321 12 257899999999999976
Q ss_pred -------cCCCEEEEecceeccccc---cccCCCCCCCCCCC-eEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 145 -------EGIPYTYVESYCFDGYFL---PNLLQPGAAAPPRD-KVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 145 -------~~~~~~i~rp~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
.+++++++||+.+++... +.+.... ..+. .+.+ .+++..++|++++|+|++++.+++++. .+++
T Consensus 166 ~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~---~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~ 240 (344)
T 2gn4_A 166 ANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLV---QNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRMH-GGEI 240 (344)
T ss_dssp GGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHH---HHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHCC-SSCE
T ss_pred HHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHH---HcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCE
Confidence 368999999999987531 2111110 1233 3444 367778899999999999999998654 4667
Q ss_pred EEEcCCCCccCHHHHHHHHHHHh
Q 021596 214 LYIQPPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 214 ~~~~~~~~~~s~~e~~~~~~~~~ 236 (310)
|++.+ + .+|+.|+++.+.+.+
T Consensus 241 ~~~~~-~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 241 FVPKI-P-SMKMTDLAKALAPNT 261 (344)
T ss_dssp EEECC-C-EEEHHHHHHHHCTTC
T ss_pred EecCC-C-cEEHHHHHHHHHHhC
Confidence 77653 3 699999999998754
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=213.58 Aligned_cols=248 Identities=12% Similarity=0.065 Sum_probs=172.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhC---CCCEEEEEcCCCCCCCchhhHh--------------HhhhcCCcEEEEccCC-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA---GHPTFVLVRESTLSAPSKSQLL--------------DHFKNLGVNFVVGDVL- 65 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~---g~~V~~~~R~~~~~~~~~~~~~--------------~~l~~~~~~~v~~D~~- 65 (310)
+|+|+|||||||||++++++|+++ |++|++++|+.+.. ....... ......+++++.+|+.
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 789999999999999999999999 89999999984321 0000000 1112368999999998
Q ss_pred -----CHHHHHHHhcCCCEEEEcccchh-----------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc---cCC
Q 021596 66 -----NHESLVNAIKQVDVVISTVGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR---AHG 122 (310)
Q Consensus 66 -----d~~~~~~~~~~~d~Vi~~a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~---~~~ 122 (310)
|.+++.++++++|+|||+|+... +.++.+++++|++.+ +++||+ |+ |+..... ++.
T Consensus 152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp GGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred cccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCcc
Confidence 77899999999999999998742 778999999999988 889887 44 3321111 110
Q ss_pred CCC----------CcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccc-cccCCCC-CC------CCCCCeEEE
Q 021596 123 AVE----------PAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFL-PNLLQPG-AA------APPRDKVVI 180 (310)
Q Consensus 123 ~~~----------~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~-~~~~~~~-~~------~~~~~~~~~ 180 (310)
+.. +..+.|+.+|+.+|+++++ .+++++++||+.++|... ....... +. ....+..+.
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~ 310 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence 100 0124499999999999976 489999999999987521 1100000 00 000111111
Q ss_pred e--c---C---CCceeEeeccchHHHHHHHHhcC----CccCCceEEEcCCCCc--cCHHHHHHHHHHHhCCCceeeecC
Q 021596 181 L--G---D---GNPKAVYNKEDDIATYTIKAVDD----PRTLNKNLYIQPPGNI--YSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 181 ~--~---~---~~~~~~~i~~~D~a~~~~~~l~~----~~~~~~~~~~~~~~~~--~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
. . + ++..+++++++|+|++++.++.. +...+++||++++. . +|+.|+++.+.+. |.+.+. ..+
T Consensus 311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~-~~~~s~~el~~~l~~~-g~~~~~-i~~ 387 (478)
T 4dqv_A 311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH-DDGIGLDEYVDWLIEA-GYPIRR-IDD 387 (478)
T ss_dssp CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC-CSSCSHHHHHHHHHHT-TCSCEE-ESS
T ss_pred cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC-CCCcCHHHHHHHHHHc-CCCccc-CCC
Confidence 1 1 1 25678999999999999999875 45567899998665 5 9999999999995 776543 236
Q ss_pred HHHHHHHHHh
Q 021596 247 EEQLLKNIQE 256 (310)
Q Consensus 247 ~~~~~~~~~~ 256 (310)
..+|...+..
T Consensus 388 ~~~w~~~l~~ 397 (478)
T 4dqv_A 388 FAEWLQRFEA 397 (478)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6667665543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=206.46 Aligned_cols=231 Identities=17% Similarity=0.226 Sum_probs=164.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh------cCCcEEEEccCCCHHHHHHHhcC-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK------NLGVNFVVGDVLNHESLVNAIKQ- 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~------~~~~~~v~~D~~d~~~~~~~~~~- 76 (310)
||+|+|||||||||+++++.|+++|++|++++|+.+.....+ +..+. ..+++++.+|+.|.+++.+++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTER---VDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHH---HHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc
Confidence 579999999999999999999999999999999854210011 11111 25788999999999999999985
Q ss_pred -CCEEEEcccchh---------------hhhHHHHHHHHHHcCCc---cEEcc-CC---CCCCc----cccCCCCCCcch
Q 021596 77 -VDVVISTVGHAL---------------LADQVKIIAAIKEAGNV---TRFFP-SE---FGNDV----DRAHGAVEPAKS 129 (310)
Q Consensus 77 -~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v---~~~v~-s~---~~~~~----~~~~~~~~~~~~ 129 (310)
+|+|||+|+... +.++.+++++|++.+ + ++||+ |+ |+... .+.. +.. +.+
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~-~~~-~~~ 154 (372)
T 1db3_A 78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETT-PFY-PRS 154 (372)
T ss_dssp CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTS-CCC-CCS
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccC-CCC-CCC
Confidence 799999998632 457889999999988 7 78887 33 44321 2222 333 367
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceeccccc-ccc----CCCCCC-CCCCC-eEEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFL-PNL----LQPGAA-APPRD-KVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~-~~~----~~~~~~-~~~~~-~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|..+|++++. .+++++++|+..+++... ..+ ...... ...+. ....+++++..++|++++|+|+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 234 (372)
T 1db3_A 155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence 899999999998864 489999999655544321 110 000000 01222 2445678889999999999999
Q ss_pred HHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 199 YTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 199 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+++.+++.+. ++.||+++ ++.+|+.|+++.+.+.+|.+.++.
T Consensus 235 a~~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 276 (372)
T 1db3_A 235 MQWMMLQQEQ--PEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFE 276 (372)
T ss_dssp HHHHTTSSSS--CCCEEECC-CCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHhcCC--CceEEEcC-CCceeHHHHHHHHHHHhCCCcccc
Confidence 9999998764 47888875 458999999999999999876543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=222.12 Aligned_cols=229 Identities=21% Similarity=0.312 Sum_probs=169.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHH-HHHHhcCCCEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHES-LVNAIKQVDVV 80 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~-~~~~~~~~d~V 80 (310)
++|+|+|||||||||+++++.|+++ |++|++++|+.... . ......+++++.+|+.|.++ +.++++++|+|
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~-----~--~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V 386 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-----S--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVV 386 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT-----G--GGTTCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh-----h--hhccCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence 3689999999999999999999998 89999999985432 1 11234578999999999765 78888999999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc----cccC-----CCCCCcchhhH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV----DRAH-----GAVEPAKSVYY 132 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~----~~~~-----~~~~~~~~~y~ 132 (310)
||+|+... +.++.+++++|++.+ ++||+ |+ |+... .+.+ .+..++.+.|+
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~ 464 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS 464 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHH
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcH
Confidence 99998532 457889999999986 68777 54 33221 1111 01112356899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEecceecccccccc----------CCCCC-CCCCCCeEEEecCCCceeEeeccchHH
Q 021596 133 DVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNL----------LQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.+|..+|++++. .+++++++||+.++|...... ..... ....+..+.++++++..++|++++|+|
T Consensus 465 ~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva 544 (660)
T 1z7e_A 465 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 544 (660)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHH
Confidence 999999998853 589999999999887643210 00000 002344566777788899999999999
Q ss_pred HHHHHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
++++.+++.+. ..+++|++.+++..+|+.|+++.+.+.+|.+.
T Consensus 545 ~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 545 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp HHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence 99999998764 35678888643237999999999999998653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=206.11 Aligned_cols=227 Identities=16% Similarity=0.135 Sum_probs=162.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-h---hcCCcEEE-EccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F---KNLGVNFV-VGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l---~~~~~~~v-~~D~~d~~~~~~~~~~~d 78 (310)
+|+|||||||||||+++++.|+++|++|++++|+ +.+...+.. + ...+++++ .+|+.|.+++.++++++|
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 4799999999999999999999999999999998 333221111 1 12568888 899999999999999999
Q ss_pred EEEEcccchh------------hhhHHHHHHHHHH-cCCccEEcc-CC---CCCCcc-------ccCC------------
Q 021596 79 VVISTVGHAL------------LADQVKIIAAIKE-AGNVTRFFP-SE---FGNDVD-------RAHG------------ 122 (310)
Q Consensus 79 ~Vi~~a~~~~------------~~~~~~~~~aa~~-~~~v~~~v~-s~---~~~~~~-------~~~~------------ 122 (310)
+|||+|+... +.++.+++++|.+ .+ ++++|+ |+ |+.... .++.
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 164 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence 9999998642 6778999999985 45 889887 44 322110 0110
Q ss_pred -C--CCCcchhhHHHHHHHHHHHHHc------CCCEEEEecceeccccccccCCC-----CC-CCCCCCeEEEecCCCce
Q 021596 123 -A--VEPAKSVYYDVKARIRRAVEAE------GIPYTYVESYCFDGYFLPNLLQP-----GA-AAPPRDKVVILGDGNPK 187 (310)
Q Consensus 123 -~--~~~~~~~y~~~K~~~e~~l~~~------~~~~~i~rp~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~ 187 (310)
+ ...+.+.|+.+|..+|++++.. +++++++||+.+++......... .. ....+....+.+.+ ..
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (342)
T 1y1p_A 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP 243 (342)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc
Confidence 0 1123578999999999988652 68899999999888643211000 00 00122222333433 56
Q ss_pred eEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 188 AVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+++++++|+|++++.+++.+...++.++.. +..+|+.|+++.+.+.+|.+
T Consensus 244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~--g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGT--AGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp EEEEEHHHHHHHHHHHHHCTTCCSCEEEEC--CEEECHHHHHHHHHHHCTTS
T ss_pred CCEeEHHHHHHHHHHHHcCcccCCceEEEe--CCCCCHHHHHHHHHHHCCCc
Confidence 799999999999999998765445545443 34799999999999999975
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-28 Score=219.49 Aligned_cols=218 Identities=16% Similarity=0.195 Sum_probs=152.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|||||||||||+++++.|+++|++|++++|+.++. +.+.+|+.+. +.++++++|+|||+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCCCCEEEEC
Confidence 68999999999999999999999999999999984421 1257787653 45677899999999
Q ss_pred ccchh----------------hhhHHHHHHH-HHHcCCccEEcc-CC---CC-CCccc-cCCCCCCcchhhHHHHHHHHH
Q 021596 84 VGHAL----------------LADQVKIIAA-IKEAGNVTRFFP-SE---FG-NDVDR-AHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 84 a~~~~----------------~~~~~~~~~a-a~~~~~v~~~v~-s~---~~-~~~~~-~~~~~~~~~~~y~~~K~~~e~ 140 (310)
|+... +.++.+++++ +++.+ +++||+ |+ || ..... .+....++.+.|+.+|...|+
T Consensus 209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~ 287 (516)
T 3oh8_A 209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEH 287 (516)
T ss_dssp CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHH
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHH
Confidence 98641 5668999999 55555 899988 43 55 21111 010111246778888988876
Q ss_pred HH---HHcCCCEEEEecceecccc---ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceE
Q 021596 141 AV---EAEGIPYTYVESYCFDGYF---LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNL 214 (310)
Q Consensus 141 ~l---~~~~~~~~i~rp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 214 (310)
.+ +..|++++++||+.+++.. ++.+... ...+....++++++.++|++++|+|++++.+++++. .++.|
T Consensus 288 ~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~----~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ 362 (516)
T 3oh8_A 288 ATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTL----FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-ISGPI 362 (516)
T ss_dssp TTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHT----TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT-CCEEE
T ss_pred HHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHH----HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc-cCCcE
Confidence 54 4579999999999998853 2222221 122223356788899999999999999999998775 45688
Q ss_pred EEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 215 YIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 215 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
|++++. .+|+.|+++.+++.+|++. ...+|.
T Consensus 363 ni~~~~-~~s~~el~~~i~~~~g~~~-~~~~p~ 393 (516)
T 3oh8_A 363 NAVAPN-PVSNADMTKILATSMHRPA-FIQIPS 393 (516)
T ss_dssp EESCSC-CEEHHHHHHHTTC-------------
T ss_pred EEECCC-CCCHHHHHHHHHHHhCCCC-CCCCCH
Confidence 998654 8999999999999999875 333444
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.9e-27 Score=190.74 Aligned_cols=196 Identities=14% Similarity=0.168 Sum_probs=145.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+||||||+||+++++.|+++|++|++++|+ +.+. ..+...+++++.+|+.|.++ +++.++|+|||++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~---~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKA---ADRLGATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec-----cccc---ccccCCCceEEecccccccH--hhcccCCEEEECC
Confidence 579999999999999999999999999999998 3333 34445789999999999888 7889999999999
Q ss_pred cch--------hhhhHHHHHHHHHHcCCccEEcc-CCCCC----Ccc---ccCCC-CCCcchhhHHHHHHHHHHH---HH
Q 021596 85 GHA--------LLADQVKIIAAIKEAGNVTRFFP-SEFGN----DVD---RAHGA-VEPAKSVYYDVKARIRRAV---EA 144 (310)
Q Consensus 85 ~~~--------~~~~~~~~~~aa~~~~~v~~~v~-s~~~~----~~~---~~~~~-~~~~~~~y~~~K~~~e~~l---~~ 144 (310)
+.. .+.++.+++++|++.+ +++|+ |+.+. ... ..+.+ ...+...|+.+|...|.+. ++
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~ 148 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMN 148 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTC
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhc
Confidence 874 2778899999999987 56665 54322 110 01101 1112578999999998652 24
Q ss_pred cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCC
Q 021596 145 EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPG 220 (310)
Q Consensus 145 ~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~ 220 (310)
.+++++++||+.++++....... .....+. .++...++++++|+|++++.+++++...+++|++.+..
T Consensus 149 ~~i~~~ivrp~~v~g~~~~~~~~-----~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~ 216 (224)
T 3h2s_A 149 ANVNWIGISPSEAFPSGPATSYV-----AGKDTLL---VGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD 216 (224)
T ss_dssp TTSCEEEEEECSBCCCCCCCCEE-----EESSBCC---CCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred CCCcEEEEcCccccCCCcccCce-----ecccccc---cCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence 68999999999998762111000 0111111 12345689999999999999999998889999998665
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=182.79 Aligned_cols=194 Identities=13% Similarity=0.135 Sum_probs=144.4
Q ss_pred ceEEEEccCcchhHHHHHHHH-hCCCCEEEEEcCCCCCCCc-hhhHhHhh--hcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSAPS-KSQLLDHF--KNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~-~~~~~~~l--~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
++|+||||||+||+++++.|+ ++|++|++++|+ ++ +. +.+ ...+++++.+|+.|.+++.++++++|+|
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~-----~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRI---PPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHS---CHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC-----ccccc---hhhccCCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 459999999999999999999 899999999998 33 22 222 3568999999999999999999999999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc-CCCCCCccccC---CCCCCcch-hhHHHHHHHHHHHHHcCCCEEEEecc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAH---GAVEPAKS-VYYDVKARIRRAVEAEGIPYTYVESY 155 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~---~~~~~~~~-~y~~~K~~~e~~l~~~~~~~~i~rp~ 155 (310)
||+++...+. +.++++++++.+ ++++|+ |+.+....... ....+... .|+.+|..+|+++++.+++++++||+
T Consensus 78 v~~ag~~n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg 155 (221)
T 3r6d_A 78 FVGAMESGSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLT 155 (221)
T ss_dssp EESCCCCHHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEEC
T ss_pred EEcCCCCChh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 9999976555 999999999998 899887 54432211000 00000111 79999999999999999999999999
Q ss_pred eeccccccccCCCCCCCCCCCeEEEecCCC-ceeEeeccchHHHHHHHHh--cCCc-cCCceEEEcCCC
Q 021596 156 CFDGYFLPNLLQPGAAAPPRDKVVILGDGN-PKAVYNKEDDIATYTIKAV--DDPR-TLNKNLYIQPPG 220 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l--~~~~-~~~~~~~~~~~~ 220 (310)
++++..... .......+. ....+++.+|+|++++.++ .++. ..++.+.+.++.
T Consensus 156 ~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 156 WLYNDPEXT------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp EEECCTTCC------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred hhcCCCCCc------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 998752111 011111111 1124899999999999999 7765 567777776543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-27 Score=209.11 Aligned_cols=196 Identities=15% Similarity=0.179 Sum_probs=155.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|+|+|||||||||+++++.|+++|+ +|+.++|+ .|.+++.++++++|+|||+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~ 53 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL 53 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence 6899999999999999999999998 77766552 5788999999999999999
Q ss_pred ccchh-----------hhhHHHHHHHHHHcCCcc-EEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH----cC
Q 021596 84 VGHAL-----------LADQVKIIAAIKEAGNVT-RFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA----EG 146 (310)
Q Consensus 84 a~~~~-----------~~~~~~~~~aa~~~~~v~-~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~----~~ 146 (310)
|+... +.++.+++++|++.+ ++ ++|+ |+.+... .+.|+.+|..+|+++++ .+
T Consensus 54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~----------~~~Y~~sK~~~E~~~~~~~~~~g 122 (369)
T 3st7_A 54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ----------DNPYGESKLQGEQLLREYAEEYG 122 (369)
T ss_dssp CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS----------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC----------CCCchHHHHHHHHHHHHHHHHhC
Confidence 98643 677899999999998 77 8888 4433211 46899999999999976 78
Q ss_pred CCEEEEecceeccccccc--------cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC-CceEEEc
Q 021596 147 IPYTYVESYCFDGYFLPN--------LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL-NKNLYIQ 217 (310)
Q Consensus 147 ~~~~i~rp~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~-~~~~~~~ 217 (310)
++++++||+.+++..... +.... ..+..+. .++++..+++++++|+|++++.+++.+... ++.|++.
T Consensus 123 ~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~ 198 (369)
T 3st7_A 123 NTVYIYRWPNLFGKWCKPNYNSVIATFCYKI---ARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP 198 (369)
T ss_dssp CCEEEEEECEEECTTCCTTSSCHHHHHHHHH---HTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred CCEEEEECCceeCCCCCCCcchHHHHHHHHH---HcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence 999999999888764321 11110 1222223 356788899999999999999999887654 7888886
Q ss_pred CCCCccCHHHHHHHHHHHhCCCceee
Q 021596 218 PPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 218 ~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+ ++.+|+.|+++.+++.+|.+.++.
T Consensus 199 ~-~~~~s~~e~~~~~~~~~g~~~~~~ 223 (369)
T 3st7_A 199 N-VFKVTLGEIVDLLYKFKQSRLDRT 223 (369)
T ss_dssp C-CEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred C-CCceeHHHHHHHHHHHhCCCcccc
Confidence 5 459999999999999999874444
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=200.19 Aligned_cols=229 Identities=17% Similarity=0.205 Sum_probs=154.0
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCC
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+. +++||||||+||||+++++.|+++|++|++++|+.... .+...+..+. ..+++++.+|+.|.+++.++++++
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV--KKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC 78 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCH--HHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchh--HHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC
Confidence 554 57999999999999999999999999999999984311 0111111111 125789999999999999999999
Q ss_pred CEEEEcccchh--------------hhhHHHHHHHHHHcCCccEEcc-CCCC----CCcc----ccCCCCC---------
Q 021596 78 DVVISTVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEFG----NDVD----RAHGAVE--------- 125 (310)
Q Consensus 78 d~Vi~~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~----~~~~----~~~~~~~--------- 125 (310)
|+|||+|+... +.++.+++++|++.+++++||+ ||.+ .... .++ ...
T Consensus 79 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~-~~~~~~~~~~~~ 157 (337)
T 2c29_D 79 TGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDES-CWSDMEFCRAKK 157 (337)
T ss_dssp SEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTT-CCCCHHHHHHHC
T ss_pred CEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcc-cCCchhhhcccC
Confidence 99999997531 5667899999998765789888 5422 1110 111 111
Q ss_pred CcchhhHHHHHHHHHHHH----HcCCCEEEEecceeccccccccCCCCCCC----CCCCeEEEecCCCceeEeeccchHH
Q 021596 126 PAKSVYYDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPNLLQPGAAA----PPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
++...|+.+|..+|+++. ..+++++++||+.+++............. ..+... .+..+ ....|++++|+|
T Consensus 158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva 235 (337)
T 2c29_D 158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLC 235 (337)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHH
Confidence 124579999999998774 35899999999998886432110000000 001110 11111 234699999999
Q ss_pred HHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 198 TYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
++++.+++.+.. ++.|++ +++ .+|+.|+++.+.+.++
T Consensus 236 ~a~~~~~~~~~~-~~~~~~-~~~-~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 236 NAHIYLFENPKA-EGRYIC-SSH-DCIILDLAKMLREKYP 272 (337)
T ss_dssp HHHHHHHHCTTC-CEEEEE-CCE-EEEHHHHHHHHHHHCT
T ss_pred HHHHHHhcCccc-CceEEE-eCC-CCCHHHHHHHHHHHCC
Confidence 999999977543 445544 344 6899999999999874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=190.35 Aligned_cols=216 Identities=13% Similarity=0.088 Sum_probs=164.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+ ||+|+||||+|+||+++++.|+++|++|++++|+.... ...+++++.+|+.|.+++.++++++|+|
T Consensus 1 m~-~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 68 (267)
T 3rft_A 1 MA-MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQCDLADANAVNAMVAGCDGI 68 (267)
T ss_dssp CC-EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC-----------CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CC-CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc-----------cCCCCEEEEcCCCCHHHHHHHHcCCCEE
Confidence 44 57899999999999999999999999999999995432 1457899999999999999999999999
Q ss_pred EEcccchh-----------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc----cCCCCCCcchhhHHHHHHHHHH
Q 021596 81 ISTVGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR----AHGAVEPAKSVYYDVKARIRRA 141 (310)
Q Consensus 81 i~~a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~----~~~~~~~~~~~y~~~K~~~e~~ 141 (310)
||+|+... +.++.+++++|++.+ ++++|+ || ++..... ++ ...++...|+.+|...|.+
T Consensus 69 i~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~-~~~~~~~~Y~~sK~~~e~~ 146 (267)
T 3rft_A 69 VHLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPD-VPARPDGLYGVSKCFGENL 146 (267)
T ss_dssp EECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTT-SCCCCCSHHHHHHHHHHHH
T ss_pred EECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCC-CCCCCCChHHHHHHHHHHH
Confidence 99998743 777899999999998 899988 43 4321111 11 2223467899999999988
Q ss_pred HH----HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEc
Q 021596 142 VE----AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 142 l~----~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~ 217 (310)
++ +.+++++++||+.+++.. .+++...+|++++|+++++..+++.+...+.++|++
T Consensus 147 ~~~~a~~~g~~~~~vr~~~v~~~~--------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~ 206 (267)
T 3rft_A 147 ARMYFDKFGQETALVRIGSCTPEP--------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA 206 (267)
T ss_dssp HHHHHHHHCCCEEEEEECBCSSSC--------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEEC
T ss_pred HHHHHHHhCCeEEEEEeecccCCC--------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEe
Confidence 85 468999999999887651 223445689999999999999998877666788888
Q ss_pred CCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHh
Q 021596 218 PPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQE 256 (310)
Q Consensus 218 ~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 256 (310)
+++ +.++.++... +.+|...+ ...+.|.+.+..
T Consensus 207 s~~-~~~~~~~~~~--~~~g~~p~---~~~~~~~~~l~~ 239 (267)
T 3rft_A 207 SAN-DAGWWDNSHL--GFLGWKPK---DNAEAFRRHITE 239 (267)
T ss_dssp CCC-TTCCBCCGGG--GGGCCCCC---CCGGGGHHHHHT
T ss_pred CCC-CCCcccChhH--HHCCCCCC---CCHHHHHHHHHh
Confidence 655 6676665433 55665432 223555555543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=194.32 Aligned_cols=213 Identities=16% Similarity=0.091 Sum_probs=164.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|+||||||+||+++++.|+++|++|++++|+.... + ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 70 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----------A-EAHEEIVACDLADAQAVHDLVKDCDGIIHL 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----------C-CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----------c-CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence 47999999999999999999999999999999985421 0 246789999999999999999999999999
Q ss_pred ccchh-----------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc-----cccCCCCCCcchhhHHHHHHHHHHHH
Q 021596 84 VGHAL-----------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV-----DRAHGAVEPAKSVYYDVKARIRRAVE 143 (310)
Q Consensus 84 a~~~~-----------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~-----~~~~~~~~~~~~~y~~~K~~~e~~l~ 143 (310)
++... +.++.+++++|++.+ +++||+ |+ |+... .+.. +.. +...|+.+|..+|++++
T Consensus 71 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~-~~~-~~~~Y~~sK~~~e~~~~ 147 (267)
T 3ay3_A 71 GGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEV-PRR-PDSLYGLSKCFGEDLAS 147 (267)
T ss_dssp CSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTS-CCC-CCSHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCC-CCC-CCChHHHHHHHHHHHHH
Confidence 98642 566789999999988 899887 43 33211 1122 333 35789999999999886
Q ss_pred H----cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCC
Q 021596 144 A----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 144 ~----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
. .+++++++||+.+++.. ..++...++++++|+|+++..+++.+...++.+++.++
T Consensus 148 ~~~~~~gi~~~~lrp~~v~~~~--------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~ 207 (267)
T 3ay3_A 148 LYYHKFDIETLNIRIGSCFPKP--------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASA 207 (267)
T ss_dssp HHHHTTCCCEEEEEECBCSSSC--------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCS
T ss_pred HHHHHcCCCEEEEeceeecCCC--------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCC
Confidence 4 58999999999876421 01234568999999999999999877544567888755
Q ss_pred CCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHh
Q 021596 220 GNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQE 256 (310)
Q Consensus 220 ~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 256 (310)
. ..++.|+.+. +.+|.+.. .+.+++.+.+..
T Consensus 208 ~-~~~~~d~~~~--~~lg~~p~---~~~~~~~~~~~~ 238 (267)
T 3ay3_A 208 N-TESWWDNDKS--AFLGWVPQ---DSSEIWREEIEQ 238 (267)
T ss_dssp C-SSCCBCCGGG--GGGCCCCC---CCGGGGHHHHHH
T ss_pred c-cccccCHHHH--HHcCCCCC---CCHHHHHHHHHh
Confidence 4 7888888887 88887754 356665555543
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-27 Score=202.46 Aligned_cols=228 Identities=16% Similarity=0.183 Sum_probs=156.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|+|||||||||||+++++.|+++|++|+++.|+.... .+...+..+. ..+++++.+|+.|.+++.++++++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ--KKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCT--TTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchh--hhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 47899999999999999999999999999999985432 1111112222 34688999999999999999999999999
Q ss_pred cccchh--------------hhhHHHHHHHHHHcCCccEEcc-CCCC----C-------CccccCC-------CCCCcch
Q 021596 83 TVGHAL--------------LADQVKIIAAIKEAGNVTRFFP-SEFG----N-------DVDRAHG-------AVEPAKS 129 (310)
Q Consensus 83 ~a~~~~--------------~~~~~~~~~aa~~~~~v~~~v~-s~~~----~-------~~~~~~~-------~~~~~~~ 129 (310)
+|+... +.++.+++++|++.+++++||+ ||.+ . ..++... +..|...
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 166 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW 166 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence 997531 5678899999999844889988 5422 0 1111110 0011112
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCCCC----CCCCeEEEecC------CCceeEeeccch
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGAAA----PPRDKVVILGD------GNPKAVYNKEDD 195 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~i~~~D 195 (310)
.|+.+|..+|+++.. .+++++++||+.+++............. ..+... .++. ++..++|++++|
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~D 245 (338)
T 2rh8_A 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVED 245 (338)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHH
Confidence 599999999987753 5899999999999886432211000000 011111 1110 112348999999
Q ss_pred HHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 196 IATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
+|++++.+++.+.. ++.|++. ++ .+|+.|+++.+.+.++
T Consensus 246 va~a~~~~~~~~~~-~~~~~~~-~~-~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 246 VCRAHIFVAEKESA-SGRYICC-AA-NTSVPELAKFLSKRYP 284 (338)
T ss_dssp HHHHHHHHHHCTTC-CEEEEEC-SE-EECHHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCCc-CCcEEEe-cC-CCCHHHHHHHHHHhCC
Confidence 99999999976543 4566654 44 6899999999998875
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-25 Score=181.39 Aligned_cols=195 Identities=19% Similarity=0.252 Sum_probs=142.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|+||||||+||+++++.|+++| ++|++++|+.+.. ..+...+++++.+|+.|++++.++++++|+|||
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~--------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI--------HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS--------CSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh--------cccccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 6789999999999999999999999 8999999984332 223345799999999999999999999999999
Q ss_pred cccchh-hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccC----CCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecce
Q 021596 83 TVGHAL-LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAH----GAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYC 156 (310)
Q Consensus 83 ~a~~~~-~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~----~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~ 156 (310)
+++... ...+.++++++++.+ +++||+ |+.+....... .........+ ..+...|+.++..+++++++||+.
T Consensus 95 ~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~vrPg~ 172 (236)
T 3qvo_A 95 NLTGEDLDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPL-KPFRRAADAIEASGLEYTILRPAW 172 (236)
T ss_dssp ECCSTTHHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGG-HHHHHHHHHHHTSCSEEEEEEECE
T ss_pred cCCCCchhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchH-HHHHHHHHHHHHCCCCEEEEeCCc
Confidence 998755 456788999999998 899988 55332111100 0000011223 556677888889999999999999
Q ss_pred eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-cCCceEEEcCCC
Q 021596 157 FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR-TLNKNLYIQPPG 220 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~~~~~ 220 (310)
+.+...... ............+++++|+|++++.++.++. ..++.+++.++.
T Consensus 173 i~~~~~~~~------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~ 225 (236)
T 3qvo_A 173 LTDEDIIDY------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG 225 (236)
T ss_dssp EECCSCCCC------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred ccCCCCcce------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence 987532211 0111111112368999999999999998876 678899998665
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-27 Score=188.28 Aligned_cols=183 Identities=15% Similarity=0.201 Sum_probs=142.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+|+|+||||||+||+++++.|+++|+ +|++++|+... ...+++++.+|+.|.+++.+++ +|+||
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~vi 70 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTAF 70 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEEE
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEEE
Confidence 47999999999999999999999998 99999998432 1357888999999999888887 99999
Q ss_pred Ecccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCC
Q 021596 82 STVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGI 147 (310)
Q Consensus 82 ~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~ 147 (310)
|+++... ..++.+++++|++.+ ++++|+ |+.+... ++...|+.+|..+|++++..++
T Consensus 71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~--------~~~~~y~~sK~~~e~~~~~~~~ 141 (215)
T 2a35_A 71 CCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA--------KSSIFYNRVKGELEQALQEQGW 141 (215)
T ss_dssp ECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT--------TCSSHHHHHHHHHHHHHTTSCC
T ss_pred ECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC--------CCccHHHHHHHHHHHHHHHcCC
Confidence 9998643 557889999999998 899888 6544321 1246899999999999999999
Q ss_pred C-EEEEecceecccccc-ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcC
Q 021596 148 P-YTYVESYCFDGYFLP-NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 148 ~-~~i~rp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~ 218 (310)
+ ++++||+.++++... .+... ........ .+ ..+++++++|+|++++.+++++. ++.|++.+
T Consensus 142 ~~~~~vrp~~v~g~~~~~~~~~~----~~~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~ 205 (215)
T 2a35_A 142 PQLTIARPSLLFGPREEFRLAEI----LAAPIARI-LP--GKYHGIEACDLARALWRLALEEG--KGVRFVES 205 (215)
T ss_dssp SEEEEEECCSEESTTSCEEGGGG----TTCCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEH
T ss_pred CeEEEEeCceeeCCCCcchHHHH----HHHhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcH
Confidence 9 999999999886432 12211 11111121 22 25789999999999999998874 67888864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=194.69 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=151.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEc-CCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
++|||||||||||+++++.|+++|++|+++.| +.... .+...+..+. ..+++++.+|+.|.+++.++++++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERK--RDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccch--hHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 68999999999999999999999999999998 53211 1111111111 1247888999999999999999999999
Q ss_pred Ecccchh--------------hhhHHHHHHHHHHc-CCccEEcc-CCC----CCCcc----ccCCCC--------CCcch
Q 021596 82 STVGHAL--------------LADQVKIIAAIKEA-GNVTRFFP-SEF----GNDVD----RAHGAV--------EPAKS 129 (310)
Q Consensus 82 ~~a~~~~--------------~~~~~~~~~aa~~~-~~v~~~v~-s~~----~~~~~----~~~~~~--------~~~~~ 129 (310)
|+|+... +.++.+++++|++. + +++||+ |+. +.... .++... .|...
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~ 158 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGW 158 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccc
Confidence 9996421 56788999999987 6 889988 432 21110 011000 11112
Q ss_pred hhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCC---C-CCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 130 VYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA---A-APPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|+.+|..+|+++.+ .+++++++||+.+++........... . ...+.... ++ ....++++++|+|++++
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~i~v~Dva~a~~ 235 (322)
T 2p4h_X 159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IG--VTRFHMVHVDDVARAHI 235 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CC--EEEEEEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-Cc--CCCcCEEEHHHHHHHHH
Confidence 699999999987753 68999999999998865321100000 0 00111111 11 12348999999999999
Q ss_pred HHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 202 KAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
.+++.+... +.|+ ++ ++.+|+.|+++.+.+.++
T Consensus 236 ~~~~~~~~~-g~~~-~~-~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 236 YLLENSVPG-GRYN-CS-PFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HHHHSCCCC-EEEE-CC-CEEEEHHHHHHHHHHHCT
T ss_pred HHhhCcCCC-CCEE-Ec-CCCCCHHHHHHHHHHhCC
Confidence 999765533 4466 44 458999999999998764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=186.71 Aligned_cols=206 Identities=13% Similarity=0.042 Sum_probs=155.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC--CCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ--VDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi~ 82 (310)
|+|+||||||+||+++++.|++ |++|++++|+... . .+ +.+|+.|++++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~---------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI---------Q----GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC---------T----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC---------C----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 5799999999999999999995 8999999998421 0 12 88999999999999986 999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCc---cccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDV---DRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~---~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+|+... +.++.+++++|++.+ + ++|+ |+ |+... .+.. +.. +.+.|+.+|..+|+
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~-~~~-~~~~Y~~sK~~~e~ 139 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEED-IPN-PINYYGLSKLLGET 139 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTS-CCC-CSSHHHHHHHHHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCC-CCC-CCCHHHHHHHHHHH
Confidence 998642 456889999999987 6 7776 43 33221 1122 222 35789999999999
Q ss_pred HHHHcCCCEEEEecceeccc--cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcC
Q 021596 141 AVEAEGIPYTYVESYCFDGY--FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~ 218 (310)
+++. ++++++||+.++|. +...+.... ..+......++ ..++++++|+|++++.+++++. ++.|++.+
T Consensus 140 ~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~ 209 (273)
T 2ggs_A 140 FALQ--DDSLIIRTSGIFRNKGFPIYVYKTL---KEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG 209 (273)
T ss_dssp HHCC--TTCEEEEECCCBSSSSHHHHHHHHH---HTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC
T ss_pred HHhC--CCeEEEeccccccccHHHHHHHHHH---HcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC
Confidence 9987 88999999988852 111111100 12334444443 7899999999999999997653 56888875
Q ss_pred CCCccCHHHHHHHHHHHhCCCceee
Q 021596 219 PGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 219 ~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+.+|+.|+++.+.+.+|.+.++.
T Consensus 210 --~~~s~~e~~~~~~~~~g~~~~~~ 232 (273)
T 2ggs_A 210 --ERISRFELALKIKEKFNLPGEVK 232 (273)
T ss_dssp --CCEEHHHHHHHHHHHTTCCSCEE
T ss_pred --CcccHHHHHHHHHHHhCCChhhc
Confidence 58999999999999999886654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=177.31 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=138.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+|+|+||||+|+||+++++.|+++|+ +|++++|+..... .....+++++.+|+.|.+++.++++++|+||
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~--------~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 89 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--------EEAYKNVNQEVVDFEKLDDYASAFQGHDVGF 89 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC--------SGGGGGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc--------ccccCCceEEecCcCCHHHHHHHhcCCCEEE
Confidence 36899999999999999999999999 9999999854331 1112468899999999999999999999999
Q ss_pred Ecccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 021596 82 STVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIP 148 (310)
Q Consensus 82 ~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~ 148 (310)
|+++... ..++.+++++|++.+ ++++|+ |+.+... ++...|+.+|..+|++++..+++
T Consensus 90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~--------~~~~~Y~~sK~~~e~~~~~~~~~ 160 (242)
T 2bka_A 90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK--------SSNFLYLQVKGEVEAKVEELKFD 160 (242)
T ss_dssp ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT--------TCSSHHHHHHHHHHHHHHTTCCS
T ss_pred ECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC--------CCcchHHHHHHHHHHHHHhcCCC
Confidence 9998643 456789999999988 889887 6544321 12457999999999999999995
Q ss_pred -EEEEecceeccccccc-cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccC
Q 021596 149 -YTYVESYCFDGYFLPN-LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTL 210 (310)
Q Consensus 149 -~~i~rp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 210 (310)
++++||+.++++.... ............ . +. ......+++++|+|++++.++.++...
T Consensus 161 ~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~dva~~~~~~~~~~~~~ 220 (242)
T 2bka_A 161 RYSVFRPGVLLCDRQESRPGEWLVRKFFGS-L--PD-SWASGHSVPVVTVVRAMLNNVVRPRDK 220 (242)
T ss_dssp EEEEEECCEEECTTGGGSHHHHHHHHHHCS-C--CT-TGGGGTEEEHHHHHHHHHHHHTSCCCS
T ss_pred CeEEEcCceecCCCCCCcHHHHHHHHhhcc-c--Cc-cccCCcccCHHHHHHHHHHHHhCcccc
Confidence 9999999998864221 000000000000 0 00 001135899999999999999877543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=170.02 Aligned_cols=223 Identities=18% Similarity=0.162 Sum_probs=148.2
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
|+. +++|+||||+|+||+++++.|+++|++|+++.|+. .+...+.......++++.+|++|.+++.++++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT-----EALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 553 57899999999999999999999999999999983 33322222223578999999999999988876
Q ss_pred ---CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+||... +.+ ++.+++.+++.+ ..++|+ ||.... ...++.
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~------~~~~~~ 148 (281)
T 3m1a_A 76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ------LSFAGF 148 (281)
T ss_dssp HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------CCCTTC
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc------CCCCCc
Confidence 7899999998642 333 566667777777 778887 554322 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCC-----eEEEecCCCceeEeeccchH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD-----KVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~D~ 196 (310)
..|+.+|...+.+.+. .++++.+++||.+.++...............- .............+.+++|+
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 228 (281)
T 3m1a_A 149 SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKA 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHH
Confidence 8899999999888753 58999999999987765432111000000000 00001111223468899999
Q ss_pred HHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
|++++.+++++. .+..|++.++ ......+....+.+.++
T Consensus 229 a~a~~~~~~~~~-~~~~~~l~s~-~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 229 AAAIRLALDTEK-TPLRLALGGD-AVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHSSS-CCSEEEESHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCeEEecCch-HHHHHHHHHHHHHHHHH
Confidence 999999998875 4567777643 35566666666655443
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=164.63 Aligned_cols=216 Identities=17% Similarity=0.190 Sum_probs=148.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ ..+.. ..+.+.. .++.++.+|++|.+++.++++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----hhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999997 22221 2222322 268999999999999998886
Q ss_pred -CCCEEEEcccchh---------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL---------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+++... +.++.++++++.. .+ ..++|+ |+..... +.....
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~~~~~~ 164 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFT-----AGEGVS 164 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTC-----CCTTSC
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccC-----CCCCCC
Confidence 7999999998531 4445566666655 35 568877 5433221 111135
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCC-eEEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD-KVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|...+.+.+. .+++++++|||.+.+......... .... .......+.....+++++|+|+++
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (278)
T 2bgk_A 165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV----DSSRVEELAHQAANLKGTLLRAEDVADAV 240 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC----CHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc----chhHHHHhhhcccccccccCCHHHHHHHH
Confidence 7899999999888754 489999999999988654322110 0000 000000111224589999999999
Q ss_pred HHHhcCCc--cCCceEEEcCCCCccCHHHHHHHHHHH
Q 021596 201 IKAVDDPR--TLNKNLYIQPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~ 235 (310)
+.++.++. ..|+.+++.+ +..+++.|+++.+.+.
T Consensus 241 ~~l~~~~~~~~~G~~~~v~g-g~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 241 AYLAGDESKYVSGLNLVIDG-GYTRTNPAFPTALKHG 276 (278)
T ss_dssp HHHHSGGGTTCCSCEEEEST-TGGGCCTHHHHHSCSC
T ss_pred HHHcCcccccCCCCEEEECC-cccccCCccchhhhhh
Confidence 99996542 2467778865 4589999999887654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=167.32 Aligned_cols=200 Identities=12% Similarity=0.063 Sum_probs=135.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc----CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----~~d~ 79 (310)
||+|+||||+|+||+++++.|+++|++|++++|+.+.. .. .+.+|+.|.+++.++++ ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~---~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI------------EA---DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------EC---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc------------cc---cccCCcccHHHHHHHHHHcCCCccE
Confidence 56999999999999999999999999999999984321 01 15789999999998887 7999
Q ss_pred EEEcccchh------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccc-cCC-------------------
Q 021596 80 VISTVGHAL------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDR-AHG------------------- 122 (310)
Q Consensus 80 Vi~~a~~~~------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~-~~~------------------- 122 (310)
|||+|+... +.++.++++++.+. + .+++|+ |+....... ...
T Consensus 66 vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T 2dkn_A 66 LVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE 144 (255)
T ss_dssp EEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred EEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence 999998642 55667777776654 4 578777 442221100 000
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccch
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 195 (310)
...++...|+.+|...|.+++. .+++++++||+.+.+.......... .......... + ...++++++|
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~d 219 (255)
T 2dkn_A 145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP---RYGESTRRFV-A-PLGRGSEPRE 219 (255)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT---TTHHHHHSCC-C-TTSSCBCHHH
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch---hhHHHHHHHH-H-HhcCCCCHHH
Confidence 0013467899999999988764 5899999999999887543321110 1111000010 1 2347899999
Q ss_pred HHHHHHHHhcCC--ccCCceEEEcCCCCccCH
Q 021596 196 IATYTIKAVDDP--RTLNKNLYIQPPGNIYSF 225 (310)
Q Consensus 196 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~ 225 (310)
+|++++.++.++ ...|+.|++.+ +..+++
T Consensus 220 va~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~ 250 (255)
T 2dkn_A 220 VAEAIAFLLGPQASFIHGSVLFVDG-GMDALM 250 (255)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST-THHHHH
T ss_pred HHHHHHHHhCCCcccceeeEEEecC-CeEeee
Confidence 999999999765 23467787764 434444
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=158.81 Aligned_cols=217 Identities=16% Similarity=0.204 Sum_probs=133.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhh---h--cCCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---K--NLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l---~--~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+ +.+.+. .+.+ . ...+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 3689999999999999999999999999999998 333221 1222 1 2347889999999999998887
Q ss_pred -----CCCEEEEcccchh-----------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCC
Q 021596 76 -----QVDVVISTVGHAL-----------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|++||+||... +.++.++++++.. .+ .++|+ ||.....
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~----- 153 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGL----- 153 (278)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSS-----
T ss_pred HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccc-----
Confidence 7999999998531 2233445555543 34 57776 5543211
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe----EEEecCCCceeEee
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK----VVILGDGNPKAVYN 191 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i 191 (310)
...+....|+.+|...+.+.+. .|+++++++||.+.+++........ ..... ............+.
T Consensus 154 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~ 230 (278)
T 1spx_A 154 HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE---ETSKKFYSTMATMKECVPAGVMG 230 (278)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----------------HHHHHHHHHHCTTSSCB
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc---hhhhhhhHHHHHHHhcCCCcCCC
Confidence 1123467899999999888754 5899999999999876533211000 00000 00000000112478
Q ss_pred ccchHHHHHHHHhcCCc---cCCceEEEcCCCCccCHHHHHHHHHHHh
Q 021596 192 KEDDIATYTIKAVDDPR---TLNKNLYIQPPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~~~---~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 236 (310)
+++|+|++++.++.++. ..|+.+++.| +..++..|+++.+++++
T Consensus 231 ~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg-G~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 231 QPQDIAEVIAFLADRKTSSYIIGHQLVVDG-GSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGC------------
T ss_pred CHHHHHHHHHHHcCccccCcccCcEEEECC-CcccccCcccccHHHHh
Confidence 99999999999987543 2477777765 45899999999998765
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=154.46 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=137.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+. ...+.++.+|++|++++.++++
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINA-----DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999983 2221 222332 3468889999999999998886
Q ss_pred --CCCEEEEcccchh------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 --QVDVVISTVGHAL------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+|||+|+... +.++.++++++. +.+ ..++|+ |+.... ...++...
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~------~~~~~~~~ 158 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE------NKNINMTS 158 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------CCCTTCHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------CCCCCCcc
Confidence 8999999998532 344555666653 456 678877 553322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++++++|+.+.+......... ........+.....+.+++|+|+++..+
T Consensus 159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~~~l 231 (255)
T 1fmc_A 159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP-------EIEQKMLQHTPIRRLGQPQDIANAALFL 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH-------HHHHHHHHTCSSCSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh-------HHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 99999999887754 378999999999987643221100 0000000011123578899999999999
Q ss_pred hcCCc--cCCceEEEcCCCCccC
Q 021596 204 VDDPR--TLNKNLYIQPPGNIYS 224 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~~~~~s 224 (310)
+.++. ..|+.|++.++ ...|
T Consensus 232 ~~~~~~~~~G~~~~v~gg-~~~s 253 (255)
T 1fmc_A 232 CSPAASWVSGQILTVSGG-GVQE 253 (255)
T ss_dssp HSGGGTTCCSCEEEESTT-SCCC
T ss_pred hCCccccCCCcEEEECCc-eecc
Confidence 86542 24678888654 3555
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-19 Score=149.10 Aligned_cols=190 Identities=15% Similarity=0.137 Sum_probs=134.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+ +.+.+. .+.+ ...+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999998 333321 1222 2247889999999999998887
Q ss_pred CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.++ +.+++.+++.+ ..++|+ |+..... ..+....|
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y 153 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA------GTVACHGY 153 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCTTBHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcC------CCCCchhH
Confidence 7999999998532 2223 45566666666 678877 5533221 12346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .|+++++++||.+.+.... +.. .. .. . .....+.+++|+|++++.++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~-------~~-~~--~--~~~~~~~~~~dvA~~v~~l~ 220 (260)
T 1nff_A 154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP-------ED-IF--Q--TALGRAAEPVEVSNLVVYLA 220 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC-------TT-CS--C--CSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch-------hh-HH--h--CccCCCCCHHHHHHHHHHHh
Confidence 9999999887753 5899999999999876533 110 00 00 0 11124788999999999998
Q ss_pred cCCc--cCCceEEEcCC
Q 021596 205 DDPR--TLNKNLYIQPP 219 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~~ 219 (310)
.++. ..|+.+++.|.
T Consensus 221 s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 221 SDESSYSTGAEFVVDGG 237 (260)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CccccCCcCCEEEECCC
Confidence 6542 23677777643
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=147.86 Aligned_cols=169 Identities=17% Similarity=0.123 Sum_probs=124.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC---CCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ---VDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~---~d~V 80 (310)
+|+|+||||+|+||+++++.|+ +|++|++++|+.. .+.+|+.|++++.+++++ +|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 5689999999999999999999 9999999999821 468999999999998875 8999
Q ss_pred EEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e 139 (310)
||+++... ..++.++++++.+.- +-.++|+ |+.... ...+....|+.+|...|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~------~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMME------DPIVQGASAAMANGAVT 136 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGT------SCCTTCHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhc------CCCCccHHHHHHHHHHH
Confidence 99998532 445667888877651 0146666 443221 11234678999999999
Q ss_pred HHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 140 RAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 140 ~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
.+.+. .+++++++||+.+.+..... +......++++++|+|++++.++... ..|+.
T Consensus 137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~-----------------~~~~~~~~~~~~~dva~~~~~~~~~~-~~G~~ 198 (202)
T 3d7l_A 137 AFAKSAAIEMPRGIRINTVSPNVLEESWDKL-----------------EPFFEGFLPVPAAKVARAFEKSVFGA-QTGES 198 (202)
T ss_dssp HHHHHHTTSCSTTCEEEEEEECCBGGGHHHH-----------------GGGSTTCCCBCHHHHHHHHHHHHHSC-CCSCE
T ss_pred HHHHHHHHHccCCeEEEEEecCccCCchhhh-----------------hhhccccCCCCHHHHHHHHHHhhhcc-ccCce
Confidence 98875 37899999999988764211 00112346899999999999888533 34566
Q ss_pred EEE
Q 021596 214 LYI 216 (310)
Q Consensus 214 ~~~ 216 (310)
|++
T Consensus 199 ~~v 201 (202)
T 3d7l_A 199 YQV 201 (202)
T ss_dssp EEE
T ss_pred Eec
Confidence 665
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=151.76 Aligned_cols=169 Identities=16% Similarity=0.165 Sum_probs=126.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
|+|+||||+|+||+++++.|+++ +|++++|+ +.+.+.. +.+. . +++.+|+.|++++.++++ ++|+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~-----~~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRR-----AGALAELAREVG--A-RALPADLADELEAKALLEEAGPLDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSC-----HHHHHHHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECC-----HHHHHHHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence 58999999999999999999998 89999997 3333222 1221 2 888999999999999998 89999
Q ss_pred EEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
||+++... ..++.++++++++.+ ..++|+ |+..... + .++...|+.+|...+.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~-----~-~~~~~~Y~~sK~a~~~ 143 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYV-----Q-VPGFAAYAAAKGALEA 143 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHH-----S-STTBHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhcc-----C-CCCcchHHHHHHHHHH
Confidence 99998542 455677888886666 778887 5432211 1 2346789999999988
Q ss_pred HHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 141 AVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 141 ~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+++. .+++++++||+.+.+..... .+.....+++++|+|++++.+++++.
T Consensus 144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------------~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 144 YLEAARKELLREGVHLVLVRLPAVATGLWAP------------------LGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHhhhCCEEEEEecCcccCCCccc------------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 8754 58999999999987764221 01122478999999999999998764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-19 Score=150.92 Aligned_cols=205 Identities=15% Similarity=0.168 Sum_probs=137.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ .++...........+.++.+|++|.+++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADID-----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 333322222224568899999999999988887 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+|+... +.++.++++++... +.-.++|+ ||.... ...+....|+
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~ 156 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR------RGEALVAIYC 156 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCCTTBHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc------cCCCCChHHH
Confidence 999999999632 44455666665432 21246666 553322 1223467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCC---CCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQ---PGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.+|...+.+.+. .++++..++||.+.+........ ......................+.+++|+|++++.
T Consensus 157 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 236 (259)
T 4e6p_A 157 ATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIF 236 (259)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 999999988764 47999999999998764322100 00000011111111222233468999999999999
Q ss_pred HhcCCc--cCCceEEEcCC
Q 021596 203 AVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~~ 219 (310)
++.+.. ..|+.+++.|+
T Consensus 237 L~s~~~~~itG~~i~vdgG 255 (259)
T 4e6p_A 237 LASAESDYIVSQTYNVDGG 255 (259)
T ss_dssp TTSGGGTTCCSCEEEESTT
T ss_pred HhCCccCCCCCCEEEECcC
Confidence 886542 23778888653
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-19 Score=144.93 Aligned_cols=175 Identities=18% Similarity=0.202 Sum_probs=118.8
Q ss_pred CCCC-ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASK-SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~-~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|+.| ++|+||||+|+||+++++.|+++|++|+++.|+ +.+.+.+ +.+ .++.++.+|+.|.+++.++++
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARD-----EKRLQALAAEL--EGALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh--hhceEEEecCCCHHHHHHHHHHHH
Confidence 6554 679999999999999999999999999999998 3333211 122 278899999999999888775
Q ss_pred ----CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||+++... +.+ ...+++.+++.+ ..++|+ |+..... ..+.
T Consensus 74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~ 146 (234)
T 2ehd_A 74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN------PFKG 146 (234)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS------CCTT
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC------CCCC
Confidence 6899999998532 222 245666666666 788887 5543321 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++++++||.+...+.... .. . ..+++++|+|+++
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~~---------~--~~~~~~~dvA~~~ 207 (234)
T 2ehd_A 147 GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT--------PG---------Q--AWKLKPEDVAQAV 207 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------------CCHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc--------cc---------c--cCCCCHHHHHHHH
Confidence 67899999988877643 589999999998866532210 00 0 1257999999999
Q ss_pred HHHhcCCc
Q 021596 201 IKAVDDPR 208 (310)
Q Consensus 201 ~~~l~~~~ 208 (310)
+.++.++.
T Consensus 208 ~~l~~~~~ 215 (234)
T 2ehd_A 208 LFALEMPG 215 (234)
T ss_dssp HHHHHSCC
T ss_pred HHHhCCCc
Confidence 99997653
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-19 Score=147.83 Aligned_cols=189 Identities=14% Similarity=0.131 Sum_probs=134.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|++++|+.... ....+.++.+|++|++++.++++ +
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISKPETADRIVREGIERFGR 96 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence 46899999999999999999999999999999985432 13468899999999999988876 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++ ++.+ ..++|+ |+...... ...++...|+
T Consensus 97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~----~~~~~~~~Y~ 171 (260)
T 3un1_A 97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQP----MVGMPSALAS 171 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSC----BTTCCCHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccC----CCCCccHHHH
Confidence 999999998642 44455566665 5556 677776 44322211 1122357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .|+++..++||.+.+........ ...........+.+++|+|++++.+.+
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----------~~~~~~~p~~r~~~~~dva~av~~L~~ 240 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH-----------STLAGLHPVGRMGEIRDVVDAVLYLEH 240 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH-----------HHHHTTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH-----------HHHhccCCCCCCcCHHHHHHHHHHhcc
Confidence 999999888763 37899999999998764332100 001111222357789999999998855
Q ss_pred CCccCCceEEEcCC
Q 021596 206 DPRTLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~~~~~~~~~~~~ 219 (310)
.+...|+.+++.|+
T Consensus 241 ~~~itG~~i~vdGG 254 (260)
T 3un1_A 241 AGFITGEILHVDGG 254 (260)
T ss_dssp CTTCCSCEEEESTT
T ss_pred cCCCCCcEEEECCC
Confidence 55446778888643
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=149.80 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=133.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhh-h--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF-K--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l-~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++++||||+|+||+++++.|+++|++|++++|+. .+.+. .+.+ . ...+.++.+|++|.+++.++++
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSA-----ETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999983 22221 1222 1 2358899999999999998886
Q ss_pred --CCCEEEEcccchh----------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 --QVDVVISTVGHAL----------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 --~~d~Vi~~a~~~~----------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|+|||+|+... ..++ ..+++.+++.+ ..++|+ |+..... ..+
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~ 150 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLV------AFP 150 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCT
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc------CCC
Confidence 7999999997421 2222 34555555666 678887 5533221 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .+++++++||+.+.++........ ...............+.+++|+|++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~ 224 (250)
T 2cfc_A 151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ------PELRDQVLARIPQKEIGTAAQVADA 224 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS------HHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC------HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 467899999999888754 389999999999987654321000 0000000001112357899999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.++. ..|+.+++.|
T Consensus 225 ~~~l~~~~~~~~~G~~~~v~g 245 (250)
T 2cfc_A 225 VMFLAGEDATYVNGAALVMDG 245 (250)
T ss_dssp HHHHHSTTCTTCCSCEEEEST
T ss_pred HHHHcCchhhcccCCEEEECC
Confidence 999997653 2367777754
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=147.79 Aligned_cols=196 Identities=15% Similarity=0.198 Sum_probs=125.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHh------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAI------ 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~------ 74 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+.++.+|+.|.+++.+++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE-----YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999983 2221 222232 235788999999999988887
Q ss_pred --cCCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 75 --KQVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 75 --~~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
.++|+|||+|+... +.++.++++++ ++.+ ..++|+ |+..... ..+..
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~ 161 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV------SASVG 161 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------C
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcc------CCCCC
Confidence 46899999998632 44455666666 4556 678877 5533221 12235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .+++++++||+.+.+.......... ... . .........+.+++|+|+++.
T Consensus 162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~-~---~~~~~~~~~~~~~~dva~~~~ 234 (266)
T 1xq1_A 162 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---FKK-V---VISRKPLGRFGEPEEVSSLVA 234 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHH---HHH-H---HHhcCCCCCCcCHHHHHHHHH
Confidence 6899999999887754 4899999999999876543221100 000 0 000111135789999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.++. ..|+.+++.+
T Consensus 235 ~l~~~~~~~~~G~~~~v~g 253 (266)
T 1xq1_A 235 FLCMPAASYITGQTICVDG 253 (266)
T ss_dssp HHTSGGGTTCCSCEEECCC
T ss_pred HHcCccccCccCcEEEEcC
Confidence 9886532 2466777754
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8e-20 Score=150.59 Aligned_cols=200 Identities=17% Similarity=0.169 Sum_probs=137.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|.+.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+.. ..+.++.+|++|.+++.++++
T Consensus 1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 77 (246)
T 3osu_A 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKE---KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVV 77 (246)
T ss_dssp CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 5556899999999999999999999999999998886321 11122233332 457889999999999988876
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..|.
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~ 150 (246)
T 3osu_A 78 SQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAV------GNPG 150 (246)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH------CCTT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC------CCCC
Confidence 7999999998652 45556677776 5555 567776 5532211 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||.+.......+... .............+.+++|+|+++
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~~~dva~~v 222 (246)
T 3osu_A 151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--------LKEQMLTQIPLARFGQDTDIANTV 222 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH--------HHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHH
Confidence 67899999998887753 578999999999887643321110 000011112223577889999999
Q ss_pred HHHhcCCcc--CCceEEEcC
Q 021596 201 IKAVDDPRT--LNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~~--~~~~~~~~~ 218 (310)
+.++.++.. .|+.+++.|
T Consensus 223 ~~l~s~~~~~itG~~i~vdg 242 (246)
T 3osu_A 223 AFLASDKAKYITGQTIHVNG 242 (246)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHhCccccCCCCCEEEeCC
Confidence 998875432 377777754
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=149.36 Aligned_cols=197 Identities=15% Similarity=0.166 Sum_probs=133.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.|+|+||||+|+||+++++.|+++|++|++++|+ +.+.+.... ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDLL 80 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-hccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence 4789999999999999999999999999999998 323221111 12468888999999999999987 48999
Q ss_pred EEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+|+... +.++.++++++... +...++|+ |+.... ...+....|+.+|.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~~~~~~Y~~sK~ 154 (244)
T 1cyd_A 81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH------VTFPNLITYSSTKG 154 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SCCTTBHHHHHHHH
T ss_pred EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc------CCCCCcchhHHHHH
Confidence 99998432 44455566665543 31357776 553322 11234678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
..+.+.+. .++++.++||+.+.+......... .........+....++++++|+|++++.++.++.
T Consensus 155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 228 (244)
T 1cyd_A 155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD------PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 228 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC------HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC------HHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhh
Confidence 99988764 478999999999887643211000 0000000011122478999999999999997643
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
..|+.+++.+
T Consensus 229 ~~~G~~~~v~g 239 (244)
T 1cyd_A 229 STSGGGILVDA 239 (244)
T ss_dssp TCCSSEEEEST
T ss_pred cccCCEEEECC
Confidence 2466777754
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=146.22 Aligned_cols=197 Identities=16% Similarity=0.171 Sum_probs=133.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ +.+.+.+.. ...+.+++.+|+.|.+++.++++ ++|+|
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-HcCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence 3689999999999999999999999999999998 333321111 12367888999999999999987 58999
Q ss_pred EEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+|+... +.++.++++++.. .+...++|+ |+.... ...+....|+.+|.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~~~~~~Y~~sK~ 154 (244)
T 3d3w_A 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ------RAVTNHSVYCSTKG 154 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SCCTTBHHHHHHHH
T ss_pred EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc------cCCCCCchHHHHHH
Confidence 99998532 3344455555543 331367776 553321 11234678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
..+.+.+. .++++.+++|+.+.+......... ...............+++++|+|++++.++.++.
T Consensus 155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 228 (244)
T 3d3w_A 155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD------PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS------TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC------hHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 99988754 478999999999887643321110 0000000011122368899999999999997542
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
..|+.+++.+
T Consensus 229 ~~~G~~~~v~g 239 (244)
T 3d3w_A 229 MTTGSTLPVEG 239 (244)
T ss_dssp TCCSCEEEEST
T ss_pred CCCCCEEEECC
Confidence 2467777754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=150.15 Aligned_cols=196 Identities=15% Similarity=0.185 Sum_probs=133.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhc-CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKN-LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ +.+.+. .+.+.. .+++++.+|+.|.+++.++++
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 322221 122211 468999999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hh----hHHHHHHHHHHcCCc-cEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-------------------LA----DQVKIIAAIKEAGNV-TRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~----~~~~~~~aa~~~~~v-~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +. .+..+++.+++.+ . .++|+ |+..... ..+...
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~------~~~~~~ 153 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFV------GDPSLG 153 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTS------CCTTCH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhcc------CCCCCc
Confidence 4999999998532 12 3344556666666 6 78877 5533221 123467
Q ss_pred hhHHHHHHHHHHHH---------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 130 VYYDVKARIRRAVE---------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 130 ~y~~~K~~~e~~l~---------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.|+.+|...+.+.+ ..+++++++|||.+.++......... .............+++++|+|+++
T Consensus 154 ~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~ 226 (251)
T 1zk4_A 154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-------EAMSQRTKTPMGHIGEPNDIAYIC 226 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-------HHHTSTTTCTTSSCBCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchh-------hhHHHhhcCCCCCCcCHHHHHHHH
Confidence 89999999987764 34789999999999876543221000 000000011112478999999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.++. ..|+.+++.+
T Consensus 227 ~~l~~~~~~~~~G~~~~v~g 246 (251)
T 1zk4_A 227 VYLASNESKFATGSEFVVDG 246 (251)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHcCcccccccCcEEEECC
Confidence 99997542 2467777754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-21 Score=161.05 Aligned_cols=217 Identities=11% Similarity=0.082 Sum_probs=142.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.. ..+.+. ...+.++.+|++|.+++.++++
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM-----DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999983 2221 122222 3568999999999999988876
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+|+... +.++.++++++.. .....++|+ |+.... ...+..
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------~~~~~~ 174 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE------TGSGFV 174 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH------HCCTTC
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc------cCCCCc
Confidence 4699999998431 3344555555543 222467776 443211 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccc-cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGY-FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|...+.+.+. .+++++++|||.+.+. ....+... ...............+.+++|+|+++
T Consensus 175 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~~ 248 (302)
T 1w6u_A 175 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT------GTFEKEMIGRIPCGRLGTVEELANLA 248 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT------SHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccc------hhhHHHHHhcCCcCCCCCHHHHHHHH
Confidence 7899999999887753 5889999999998765 22211110 00000000111122578899999999
Q ss_pred HHHhcCCcc--CCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 201 IKAVDDPRT--LNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 201 ~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
+.++.++.. .|+.+++.+ +..++..|+++.+.+..|+
T Consensus 249 ~~l~~~~~~~~~G~~~~v~g-g~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 249 AFLCSDYASWINGAVIKFDG-GEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHTSGGGTTCCSCEEEEST-THHHHHHSTTGGGGGCCHH
T ss_pred HHHcCCcccccCCCEEEECC-CeeeccCCccccchhhccc
Confidence 999865432 467777764 4477777877766665443
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-18 Score=143.72 Aligned_cols=195 Identities=13% Similarity=0.114 Sum_probs=125.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... ..++.++.+|++|.+++.++++ +
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATEVMDVADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS------------CCSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------------cCCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999984311 2248889999999999988886 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+|+... +.++.++++++ ++.+ ..++|+ |+.... ...+....|+
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------~~~~~~~~Y~ 147 (250)
T 2fwm_X 75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH------TPRIGMSAYG 147 (250)
T ss_dssp CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------SCCTTCHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC------CCCCCCchHH
Confidence 999999998632 33445555555 5555 678777 553322 1123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE----ecCCCceeEeeccchHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI----LGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.+|...+.+.+. .++++++++||.+.+++........ ........- .........+.+++|+|++++
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~ 225 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHH
Confidence 999999887754 4899999999999876543211000 000000000 000111234789999999999
Q ss_pred HHhcCCc--cCCceEEEcCC
Q 021596 202 KAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~ 219 (310)
.++.++. ..|+.+.+.|+
T Consensus 226 ~l~s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 226 FLASDLASHITLQDIVVDGG 245 (250)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCccccCCCCCEEEECCC
Confidence 9987642 34677777643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=151.82 Aligned_cols=204 Identities=12% Similarity=0.145 Sum_probs=134.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ-----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 33322 222232 3468899999999999988876
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+..... ..+..
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~ 154 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQ------PLWYE 154 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCTTC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC------CCCCc
Confidence 7999999998532 23334444444 4556 678887 5533221 12345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCC--CCe-EEEecCC-CceeEeeccchHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPP--RDK-VVILGDG-NPKAVYNKEDDIA 197 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~i~~~D~a 197 (310)
..|+.+|...+.+.+. .++++++++||.+.++.............. ... ....... .....+.+++|+|
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 234 (263)
T 3ai3_A 155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELA 234 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHH
Confidence 7899999999887753 589999999999987643221000000000 000 0000000 1123578999999
Q ss_pred HHHHHHhcCCc--cCCceEEEcCC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
++++.++.++. ..|+.+++.|+
T Consensus 235 ~~~~~l~s~~~~~~~G~~~~vdgG 258 (263)
T 3ai3_A 235 NFFVFLCSERATYSVGSAYFVDGG 258 (263)
T ss_dssp HHHHHHTSTTCTTCCSCEEEESTT
T ss_pred HHHHHHcCccccCCCCcEEEECCC
Confidence 99999987543 24677777644
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-20 Score=157.99 Aligned_cols=208 Identities=13% Similarity=0.098 Sum_probs=137.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
++++||||+|+||+++++.|+++|++|++++|+. .+.. ..+.+. ..++.++.+|++|.+++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL-----EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999983 2221 122222 2357889999999999988776
Q ss_pred ---CCCEEEEcccchh---------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 ---QVDVVISTVGHAL---------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
++|++||+||... ...+..+++++++.+ ...++|+ |+..... ..+....|+.+
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~Y~~s 156 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM------PVAQQPVYCAS 156 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------CCTTCHHHHHH
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC------CCCCCchHHHH
Confidence 4799999998643 223455666665542 1467776 5432221 12335789999
Q ss_pred HHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCe--E-EEecCCCceeEeeccchHHHHHHH
Q 021596 135 KARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK--V-VILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 135 K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|...+.+.+. .++++..++||++.+.......... ..... . ...........+++++|+|++++.
T Consensus 157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~ 233 (267)
T 2gdz_A 157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEE---NMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT 233 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHH---HHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccccc---ccchhhhHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 9998876652 5789999999998776432211000 00000 0 000000112347899999999999
Q ss_pred HhcCCccCCceEEEcCCCCccCHHH
Q 021596 203 AVDDPRTLNKNLYIQPPGNIYSFND 227 (310)
Q Consensus 203 ~l~~~~~~~~~~~~~~~~~~~s~~e 227 (310)
++.++...|+++++.++. .+++.|
T Consensus 234 l~s~~~~~G~~~~v~gg~-~~~~~~ 257 (267)
T 2gdz_A 234 LIEDDALNGAIMKITTSK-GIHFQD 257 (267)
T ss_dssp HHHCTTCSSCEEEEETTT-EEEECC
T ss_pred HhcCcCCCCcEEEecCCC-cccccC
Confidence 998765668888887544 555443
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.8e-20 Score=156.38 Aligned_cols=218 Identities=13% Similarity=0.195 Sum_probs=149.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcC-----CcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNL-----GVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~-----~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. .+. ...+.+... .+.++.+|++|.+++.++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNP-----DKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 222 222333322 57889999999999888776
Q ss_pred -----CCCEEEEcccchh--------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 -----QVDVVISTVGHAL--------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+|+... +.++.++++++.. .+ -.++|+ ||.... ...
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~ 158 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAAS------NTH 158 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH------SCC
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHc------CCC
Confidence 6899999999621 4445556665544 33 347776 543221 112
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+....|+.+|...+.+.+. .++++..++||.+........... ...............+.+++|+|+
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~r~~~~~dva~ 232 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES------AELSSDYAMCTPLPRQGEVEDVAN 232 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC------HHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC------HHHHHHHHhcCCCCCCCCHHHHHH
Confidence 3357899999999988763 468999999999887654322110 000000000011235678999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCCCCccC-HHHHHHHHHHHhCCCc
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPPGNIYS-FNDLVSLWERKIGKTL 240 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~~~~~s-~~e~~~~~~~~~g~~~ 240 (310)
+++.++.+.. ..|+.+++.|+. .++ ..|+++.+.+.+|.+.
T Consensus 233 ~~~~l~s~~~~~itG~~~~vdgG~-~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 233 MAMFLLSDAASFVTGQVINVDGGQ-MLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG-GGSCCCCCHHHHHHHHCTTG
T ss_pred HHHHHhCcccCCCCCCEEEeCCCh-hcccCCcchhccccccCCcc
Confidence 9999987543 247788886544 555 7889999999998764
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.5e-19 Score=146.98 Aligned_cols=199 Identities=15% Similarity=0.148 Sum_probs=133.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.. +....+.+. . .++.+|++|.+++.++++ +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----GKEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-----HHHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 378999999999999999999999999999999842 322233332 4 889999999999888775 6
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++. +.+ ..++|+ ||..... ..|....|+
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 150 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF------AEQENAAYN 150 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS------BCTTBHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccC------CCCCChhHH
Confidence 899999998542 344455555553 445 678877 5543221 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+...+......... ........+........+.+++|+|++++.++.
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s 228 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP--DPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 228 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhcccccc--CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887753 47899999999987764332110000 000000001111222458899999999999987
Q ss_pred CCc--cCCceEEEcCC
Q 021596 206 DPR--TLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~--~~~~~~~~~~~ 219 (310)
++. ..|+.+++.++
T Consensus 229 ~~~~~~~G~~~~v~gG 244 (256)
T 2d1y_A 229 EKASFITGAILPVDGG 244 (256)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred chhcCCCCCEEEECCC
Confidence 642 24677777643
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=144.99 Aligned_cols=203 Identities=11% Similarity=0.096 Sum_probs=132.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+. ..++.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRN-----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 32222 222232 2268899999999999998887
Q ss_pred ---CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... ..+ ++.++..+++.+ ..++|+ ||.... ...+..
T Consensus 82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 154 (260)
T 2z1n_A 82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLL------RPWQDL 154 (260)
T ss_dssp HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCTTB
T ss_pred HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhc------CCCCCC
Confidence 6999999998532 222 245556666666 678887 553322 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC--CCCCCe-EEEecCCCceeEeeccchHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA--APPRDK-VVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~~~D~a~ 198 (310)
..|+.+|...+.+.+. .|+++..++||++.+++.......... ...... ...+........+.+++|+|+
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 234 (260)
T 2z1n_A 155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELAS 234 (260)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHH
Confidence 7899999998887753 489999999999987654311000000 000000 000101111124779999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.++. ..|+.+++.|
T Consensus 235 ~v~~l~s~~~~~~tG~~i~vdG 256 (260)
T 2z1n_A 235 VVAFLASEKASFITGAVIPVDG 256 (260)
T ss_dssp HHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHhCccccCCCCCEEEeCC
Confidence 9999987532 2466777753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-18 Score=146.53 Aligned_cols=219 Identities=17% Similarity=0.150 Sum_probs=136.2
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-h--hcCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-F--KNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l--~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|+. .++++||||+|+||+++++.|+++|++|+++.|+....+..+.+.+.. + ....+.++.+|++|.+++.++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 443 468999999999999999999999999999999854432333322221 1 13568999999999999998887
Q ss_pred ------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 ------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+||... +.++.++++++ ++.+ ..++|. ||..... ...
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~-----~~~ 154 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAG-----GTP 154 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-----CCC
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhcc-----CCC
Confidence 7999999999542 55566677776 6666 677776 5533221 112
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCC-eEE------EecCCCc---ee
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD-KVV------ILGDGNP---KA 188 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~---~~ 188 (310)
+....|+.+|...+.+.+. .|+++++++||.+.+.......... .... ... ..+.++. ..
T Consensus 155 ~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (324)
T 3u9l_A 155 PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGV---PDDHARQAEYEAGPNAGLGEEIKKAF 231 (324)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBC---CSCHHHHHHHHHTTTTTHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCC---chHHHHHHhhccccccCCHHHHHHHH
Confidence 3357899999999887753 5899999999998643211000000 0000 000 0000000 00
Q ss_pred -----EeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHH
Q 021596 189 -----VYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLV 229 (310)
Q Consensus 189 -----~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~ 229 (310)
+..+++|+|++++.++..+........+.++. ......+.
T Consensus 232 ~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~-~~~~~~~~ 276 (324)
T 3u9l_A 232 AAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPA-EDGADVGF 276 (324)
T ss_dssp HHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTT-CCSHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCc-chHHHHHH
Confidence 12578999999999998774323334455554 45544333
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=149.01 Aligned_cols=199 Identities=11% Similarity=0.111 Sum_probs=136.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.. ....+.+.. ..+.++.+|++|.+++.++++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP------APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC------HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch------HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999842 222233332 357888999999999998887
Q ss_pred -CCCEEEEcccchh-------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+|+... + ..++.++..+++.+ ..++|+ ||.... ...+....
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 150 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGL------VGSTGKAA 150 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------SCCTTBHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhc------cCCCCchh
Confidence 7999999998532 1 23455666667776 778887 553322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCC--CCCCCCCCCe---EEEe-cCCCceeEeeccchHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQ--PGAAAPPRDK---VVIL-GDGNPKAVYNKEDDIA 197 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~--~~~~~~~~~~---~~~~-~~~~~~~~~i~~~D~a 197 (310)
|+.+|...+.+.+. .+++++.++||.+.+++...... .. ..... ...+ ........+++++|+|
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 227 (255)
T 2q2v_A 151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAA---NGGDPLQAQHDLLAEKQPSLAFVTPEHLG 227 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHH---HTCCHHHHHHHHHTTTCTTCCCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccc---cccchHHHHHHHHhccCCCCCCcCHHHHH
Confidence 99999999887763 47899999999998765322110 00 00000 0000 1112224688999999
Q ss_pred HHHHHHhcCCc--cCCceEEEcC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
++++.++.++. ..|+.+++.|
T Consensus 228 ~~~~~l~s~~~~~~tG~~~~vdg 250 (255)
T 2q2v_A 228 ELVLFLCSEAGSQVRGAAWNVDG 250 (255)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCCccCCCCCCEEEECC
Confidence 99999987543 2367777754
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=147.37 Aligned_cols=196 Identities=17% Similarity=0.173 Sum_probs=127.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEE-cCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++. |+.. ......+.+. ...+.++.+|++|.+++.++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAST----SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDA 80 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCS----HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999984 5421 1112223332 3458899999999999988876
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +.++.++++++ ++.+ ..++|+ |+..... ..+...
T Consensus 81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~ 153 (247)
T 2hq1_A 81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGII------GNAGQA 153 (247)
T ss_dssp HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------CH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc------CCCCCc
Confidence 7999999998642 33334444444 4456 678887 5532211 112357
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++++++||.+.......+... .............+++++|+|++++.
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~ 225 (247)
T 2hq1_A 154 NYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDK--------VKEMYLNNIPLKRFGTPEEVANVVGF 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchH--------HHHHHHhhCCCCCCCCHHHHHHHHHH
Confidence 899999999887754 378999999998876543221100 00000111112357899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++..+. ..|+.+++.+
T Consensus 226 l~~~~~~~~~G~~~~v~g 243 (247)
T 2hq1_A 226 LASDDSNYITGQVINIDG 243 (247)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCcccccccCcEEEeCC
Confidence 886542 2467788854
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=143.76 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=134.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +++.+. .+.+ ...+.++.+|++|.+++.++++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 333221 1222 2357889999999999988876
Q ss_pred CCCEEEEcccchh-------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... + ..++.+++.+++.+ ..++|+ ||..... ..+....|
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y 151 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM------GLALTSSY 151 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCTTCHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc------CCCCchhH
Confidence 7999999998532 1 22346667777776 678887 5533221 12346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEee-ccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYN-KEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~~~ 203 (310)
+.+|...+.+.+. .+++++.++||.+.+.+........ . .. . . .......+. +++|+|++++.+
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~-~~-~--~-~~~p~~~~~~~~~dvA~~v~~l 223 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ---G-EG-N--Y-PNTPMGRVGNEPGEIAGAVVKL 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC---S-TT-S--C-TTSTTSSCB-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhH---H-HH-H--H-hcCCCCCCCCCHHHHHHHHHHH
Confidence 9999999887753 4789999999999876533221110 0 00 0 0 000112366 899999999999
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.++. ..|+.+++.|.
T Consensus 224 ~s~~~~~~tG~~~~vdgG 241 (254)
T 1hdc_A 224 LSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCchhcCCCCCEEEECCC
Confidence 87542 24677777543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-19 Score=147.09 Aligned_cols=204 Identities=15% Similarity=0.082 Sum_probs=130.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc---------CCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN---------LGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~---------~~~~~v~~D~~d~~~~~~~ 73 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+.. ..+.++.+|++|.+++.++
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR-----AAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 36899999999999999999999999999999983 2221 1122211 4588999999999998888
Q ss_pred hcC-------C-CEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccC
Q 021596 74 IKQ-------V-DVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 74 ~~~-------~-d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~ 121 (310)
++. + |+|||+|+... +.++.++++++... +...++|+ |+.....
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---- 157 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV---- 157 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----
T ss_pred HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc----
Confidence 764 4 99999998532 44556666666543 21357776 5532111
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKED 194 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 194 (310)
..+....|+.+|...+.+.+. .+++++++|||.+.+.......... . ...........+.+++
T Consensus 158 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~ 227 (264)
T 2pd6_A 158 --GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV---V-----DKITEMIPMGHLGDPE 227 (264)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------------CTGGGCTTCSCBCHH
T ss_pred --CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHH---H-----HHHHHhCCCCCCCCHH
Confidence 123467899999998877653 5899999999998876543221100 0 0000001112478899
Q ss_pred hHHHHHHHHhcCCc--cCCceEEEcCCCCccCHHH
Q 021596 195 DIATYTIKAVDDPR--TLNKNLYIQPPGNIYSFND 227 (310)
Q Consensus 195 D~a~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e 227 (310)
|+|+++..++.++. ..|+.+++.++ ..++...
T Consensus 228 dva~~~~~l~~~~~~~~~G~~~~v~gg-~~~~~~~ 261 (264)
T 2pd6_A 228 DVADVVAFLASEDSGYITGTSVEVTGG-LFMAENL 261 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTT-C------
T ss_pred HHHHHHHHHcCCcccCCCCCEEEECCC-ceecccc
Confidence 99999999986532 34677777643 3554443
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=148.50 Aligned_cols=197 Identities=15% Similarity=0.153 Sum_probs=131.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCc-EEEEccCCCHHHHHHHhc------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGV-NFVVGDVLNHESLVNAIK------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~-~~v~~D~~d~~~~~~~~~------~ 76 (310)
++|+||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+ ...+ .++.+|+.|.+++.++++ +
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDRE-----AAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence 689999999999999999999999999999998 333221 1222 2345 889999999999988873 7
Q ss_pred CCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+|+... +.+ +..+++.+++.+ ..++|+ |+....... +.. +...|+
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~-~~~~Y~ 160 (254)
T 2wsb_A 86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN---RPQ-FASSYM 160 (254)
T ss_dssp CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---SSS-CBHHHH
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC---CCC-cchHHH
Confidence 899999998632 223 334445555666 778887 553322111 111 237899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .+++++++||+.+.++........ ......+........+.+++|+|++++.++.
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 234 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER------PELFETWLDMTPMGRCGEPSEIAAAALFLAS 234 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC------HHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 999999888753 389999999999987643221100 0000000000111357899999999999986
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
++. ..|+.+++.|
T Consensus 235 ~~~~~~~G~~~~v~g 249 (254)
T 2wsb_A 235 PAASYVTGAILAVDG 249 (254)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred cccccccCCEEEECC
Confidence 532 2467777753
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=143.91 Aligned_cols=197 Identities=14% Similarity=0.155 Sum_probs=130.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+..... ...+.+ ...+.++.+|++|.+++.++++ +
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999854321 111222 3468899999999999988886 7
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHc---------CCccEEcc-CCCCCCccccCCC
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEA---------GNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~---------~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
+|++||+||... +.++.++++++... ++..++|+ ||.....
T Consensus 82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~------ 155 (257)
T 3tpc_A 82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD------ 155 (257)
T ss_dssp CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH------
T ss_pred CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc------
Confidence 999999998641 44556666666543 11456776 5433211
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccch
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDD 195 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D 195 (310)
..+....|+.+|...+.+.+. .|+++..++||.+............ .......... ..+..++|
T Consensus 156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~~r~~~~~d 227 (257)
T 3tpc_A 156 GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV--------QDALAASVPFPPRLGRAEE 227 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------------CCSSSSCSCBCHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH--------HHHHHhcCCCCCCCCCHHH
Confidence 123467899999999877643 5899999999999876543321110 0011111111 35788999
Q ss_pred HHHHHHHHhcCCccCCceEEEcCC
Q 021596 196 IATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 196 ~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
+|+++..++++....|+.+++.|.
T Consensus 228 va~~v~~l~s~~~itG~~i~vdGG 251 (257)
T 3tpc_A 228 YAALVKHICENTMLNGEVIRLDGA 251 (257)
T ss_dssp HHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHcccCCcCCcEEEECCC
Confidence 999999999875556778888653
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=149.41 Aligned_cols=199 Identities=18% Similarity=0.196 Sum_probs=135.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH-hhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD-HFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|++++||||+|+||+++++.|+++|++|+++.|+... ..+.+. .+. ...+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTT----AMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChH----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999887421 111111 111 2458899999999999998876
Q ss_pred --CCCEEEEcccc--hh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGH--AL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~--~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+|+. .. +.++.++++++ ++.+ ..++|+ |+.+.... ...+.
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~----~~~~~ 157 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSA----PGWIY 157 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGC----CCCTT
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhccc----CCCCC
Confidence 79999999993 11 44555666666 5666 677776 54422211 22334
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||.+.+........... ...........+.+++|+|+++
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~p~~r~~~~~dva~~v 229 (264)
T 3i4f_A 158 RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEAR--------QLKEHNTPIGRSGTGEDIARTI 229 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHH--------HC--------CCCCHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHH--------HHHhhcCCCCCCcCHHHHHHHH
Confidence 67899999999877753 57999999999998765432211100 0000111123577899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.++. ..|+.+++.|.
T Consensus 230 ~~l~s~~~~~itG~~i~vdGG 250 (264)
T 3i4f_A 230 SFLCEDDSDMITGTIIEVTGA 250 (264)
T ss_dssp HHHHSGGGTTCCSCEEEESCS
T ss_pred HHHcCcccCCCCCcEEEEcCc
Confidence 99997643 24788888654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=148.93 Aligned_cols=195 Identities=13% Similarity=0.135 Sum_probs=133.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ +.+.+. .+.+ ....+.++.+|+.|.+++.++++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS-----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 333221 1222 13468899999999999998886
Q ss_pred ---CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+|+... +.++ ..+++.+++.+ ..++|+ |+..... ..+..
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~ 154 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT------GNVGQ 154 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH------CCTTC
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC------CCCCC
Confidence 7999999998532 2333 34445555666 778887 5532111 11235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++++++|+.+.+.....+... .............+++++|+|++++
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~ 226 (248)
T 2pnf_A 155 VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE--------IKQKYKEQIPLGRFGSPEEVANVVL 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--------HHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHH--------HHHHHHhcCCCCCccCHHHHHHHHH
Confidence 7899999999887753 478999999999887654321100 0000000011135789999999999
Q ss_pred HHhcCC--ccCCceEEEcC
Q 021596 202 KAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~--~~~~~~~~~~~ 218 (310)
.++.+. ...|+.+++.+
T Consensus 227 ~l~~~~~~~~~G~~~~v~g 245 (248)
T 2pnf_A 227 FLCSELASYITGEVIHVNG 245 (248)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhhcCCCcEEEeCC
Confidence 998653 22467777753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=145.16 Aligned_cols=197 Identities=14% Similarity=0.133 Sum_probs=134.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|++++|+.... ....+.+ ...+.++.+|+.|.+++.++++ +
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----EAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH----HHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH----HHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 37899999999999999999999999999999984321 1122223 3568999999999999998887 7
Q ss_pred CCEEEEcccch--------------h-----------hhhHHHHHHHHHHc----------CCccEEcc-CCCCCCcccc
Q 021596 77 VDVVISTVGHA--------------L-----------LADQVKIIAAIKEA----------GNVTRFFP-SEFGNDVDRA 120 (310)
Q Consensus 77 ~d~Vi~~a~~~--------------~-----------~~~~~~~~~aa~~~----------~~v~~~v~-s~~~~~~~~~ 120 (310)
+|+|||+|+.. . +.++.++++++... + ..++|+ |+.....
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--- 162 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFE--- 162 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHH---
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcC---
Confidence 99999999853 1 44456677776654 4 567776 5432211
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeecc
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 193 (310)
..+....|+.+|...+.+.+. .++++.+++||++.+......... . ... +.........+.++
T Consensus 163 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~--~~~~~~~~~~~~~~ 232 (265)
T 2o23_A 163 ---GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----V-CNF--LASQVPFPSRLGDP 232 (265)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH--HHHTCSSSCSCBCH
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH----H-HHH--HHHcCCCcCCCCCH
Confidence 123357899999998877653 479999999999877644321110 0 000 00000001247889
Q ss_pred chHHHHHHHHhcCCccCCceEEEcCC
Q 021596 194 DDIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
+|+|++++.++..+...|+.+++.|.
T Consensus 233 ~dva~~~~~l~~~~~~~G~~i~vdgG 258 (265)
T 2o23_A 233 AEYAHLVQAIIENPFLNGEVIRLDGA 258 (265)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhhcCccCceEEEECCC
Confidence 99999999999766556778887643
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.7e-19 Score=146.86 Aligned_cols=205 Identities=15% Similarity=0.176 Sum_probs=133.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD---EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHH---HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChH---HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999995321 1112222232 3468889999999999988876
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...+...
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~ 174 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGL------VASPFKS 174 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCTTCH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccc------cCCCCch
Confidence 7999999999743 44455566655 5555 567776 543222 1123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC--CCCCe--EEEecCCCceeEeeccchHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA--PPRDK--VVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~i~~~D~a~ 198 (310)
.|+.+|...+.+.+. .|+++..++||.+............... ..... ...+..+.....+.+++|+|+
T Consensus 175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~ 254 (281)
T 3v2h_A 175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVAS 254 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHH
Confidence 899999999887753 4799999999999876543221110000 00000 011222334457899999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.++. ..|+.+++.|
T Consensus 255 ~v~~L~s~~a~~itG~~i~vdG 276 (281)
T 3v2h_A 255 LALYLAGDDAAQITGTHVSMDG 276 (281)
T ss_dssp HHHHHHSSGGGGCCSCEEEEST
T ss_pred HHHHHcCCCcCCCCCcEEEECC
Confidence 9999997653 2467777754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=143.74 Aligned_cols=206 Identities=14% Similarity=0.132 Sum_probs=127.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+.+.......+.++.+|++|.+++.++++ +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-----KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 334332222224568999999999999888876 6
Q ss_pred CCEEEEcccchh--------------------hhhHHHHHHHHH----HcC---CccEEcc-CCCCCCccccCCCCCCcc
Q 021596 77 VDVVISTVGHAL--------------------LADQVKIIAAIK----EAG---NVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 77 ~d~Vi~~a~~~~--------------------~~~~~~~~~aa~----~~~---~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
+|++||+|+... +.++.++++++. +.+ ...++|+ |+.... ...+..
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~------~~~~~~ 157 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG------RPRPNL 157 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT------SCCTTC
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc------CCCCCc
Confidence 899999998632 333444444443 221 1234665 543322 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|+..+.+.+. .++++..++||.+.......+.... .......+........+++++|+|+++.
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~ 233 (261)
T 3n74_A 158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED----SEEIRKKFRDSIPMGRLLKPDDLAEAAA 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC----cHHHHHHHhhcCCcCCCcCHHHHHHHHH
Confidence 7899999999887753 4789999999998876544332110 0111111111122246889999999999
Q ss_pred HHhcCCc--cCCceEEEcCCCCccCH
Q 021596 202 KAVDDPR--TLNKNLYIQPPGNIYSF 225 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~~~~~s~ 225 (310)
.++.+.. ..|+.+++.|.. .++.
T Consensus 234 ~l~s~~~~~itG~~i~vdgG~-~~~~ 258 (261)
T 3n74_A 234 FLCSPQASMITGVALDVDGGR-SIGG 258 (261)
T ss_dssp HHTSGGGTTCCSCEEEESTTT-TC--
T ss_pred HHcCCcccCcCCcEEEecCCc-ccCC
Confidence 9986432 357777776443 4443
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-19 Score=149.00 Aligned_cols=199 Identities=16% Similarity=0.102 Sum_probs=132.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
++++||||+|+||+++++.|+++|++|++++|+ +.+.+.. +.+ ..++.++.+|++|.+++.++++ +
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLD-----VMAAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999998 3333211 222 2268899999999999998887 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+|||+||... +.++.++++++.. .++..++|+ |+..... ..|....|+
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~Y~ 160 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV------GAPLLAHYS 160 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------CCTTCHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc------CCCCchhHH
Confidence 999999998532 3334455555543 231357776 5533221 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccC-----CCCCCCCC-CCeEEEecCCCceeEeeccchHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLL-----QPGAAAPP-RDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.+|...+.+.+. .++++++++||.+.+.+..... ... .. ......+........+++++|+|++
T Consensus 161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~dvA~~ 237 (263)
T 3ak4_A 161 ASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRG---MTPEAVRAEYVSLTPLGRIEEPEDVADV 237 (263)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHT---SCHHHHHHHHHHTCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccc---cCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 999999887753 4899999999999876432210 000 00 0000000001112358899999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.++. ..|+.+++.|
T Consensus 238 v~~l~s~~~~~~tG~~~~vdg 258 (263)
T 3ak4_A 238 VVFLASDAARFMTGQGINVTG 258 (263)
T ss_dssp HHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHhCccccCCCCCEEEECc
Confidence 999987542 2467777764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-19 Score=148.09 Aligned_cols=197 Identities=15% Similarity=0.118 Sum_probs=133.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|+||+++++.|+++|++|++++|+. ++. ...+.+. ...+..+.+|+.|.+++.++++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ-----ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999983 222 1223332 2357889999999999888776
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+|+... +.++.++++++ ++.+ ..++|+ |+.... ...+...
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~ 162 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAY------HPFPNLG 162 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------SCCTTBH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhc------CCCCCch
Confidence 7999999998521 33344444444 4556 678877 553322 1123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++..++||.+...+....... ...............+.+++|+|++++.
T Consensus 163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~v~~ 236 (260)
T 2zat_A 163 PYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD------KARKEYMKESLRIRRLGNPEDCAGIVSF 236 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS------HHHHHHHHHHHTCSSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC------hHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 899999999888764 389999999999877643221000 0000000001112357899999999999
Q ss_pred HhcCCc--cCCceEEEcCC
Q 021596 203 AVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~~ 219 (310)
++.++. ..|+.+++.|+
T Consensus 237 l~s~~~~~~tG~~~~vdgG 255 (260)
T 2zat_A 237 LCSEDASYITGETVVVGGG 255 (260)
T ss_dssp HTSGGGTTCCSCEEEESTT
T ss_pred HcCcccCCccCCEEEECCC
Confidence 987543 24677877654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.3e-19 Score=145.71 Aligned_cols=197 Identities=19% Similarity=0.268 Sum_probs=132.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDE-----AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 222 1222332 3458899999999999988876
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHHH----HcCCccEEcc-CC-CCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAIK----EAGNVTRFFP-SE-FGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~----~~~~v~~~v~-s~-~~~~~~~~~~~~~~~ 127 (310)
++|+|||+|+... +.++.++++++. +.+ ..++|+ |+ .+.... +.. +
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~-~ 161 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN----RPQ-Q 161 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----SSS-C
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC----CCC-C
Confidence 6999999998421 334455566654 345 567776 44 332111 111 1
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccc-ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLP-NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|...+.+.+. .+++++++||+.+.+.... ..... .....+........+++++|+|++
T Consensus 162 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~ 234 (260)
T 3awd_A 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKP-------ELYDAWIAGTPMGRVGQPDEVASV 234 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCH-------HHHHHHHHTCTTSSCBCHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCCh-------HHHHHHHhcCCcCCCCCHHHHHHH
Confidence 37899999999988754 5899999999999876543 11100 000000001111357899999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.++. ..|+.+++.+
T Consensus 235 ~~~l~~~~~~~~~G~~~~v~g 255 (260)
T 3awd_A 235 VQFLASDAASLMTGAIVNVDA 255 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCchhccCCCcEEEECC
Confidence 999986532 2466777754
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-18 Score=140.84 Aligned_cols=195 Identities=15% Similarity=0.097 Sum_probs=127.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.. .+.. +.+. ...+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAE--AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHH--HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch----hHHH--HHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999999831 2221 1222 3458889999999999888764
Q ss_pred -CCCEEEEcccchh-------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++. .++..+++.+ ..++|+ ||.... ...+....
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 153 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------LKIEAYTH 153 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------SCCSSCHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc------cCCCCchh
Confidence 7999999998642 23333 3444466666 678877 553322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceecccccc-ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLP-NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
|+.+|...+.+.+. .++++..++||.+..++.. ...... ...... . . .....+.+++|+|++++.
T Consensus 154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~-~--~---~~~~~~~~p~dva~~~~~ 226 (249)
T 2ew8_A 154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLPN-M--L---QAIPRLQVPLDLTGAAAF 226 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------C-T--T---SSSCSCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHHH-h--h---CccCCCCCHHHHHHHHHH
Confidence 99999999887754 4899999999998876543 211000 000000 0 0 111247899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.|
T Consensus 227 l~s~~~~~~tG~~~~vdG 244 (249)
T 2ew8_A 227 LASDDASFITGQTLAVDG 244 (249)
T ss_dssp HTSGGGTTCCSCEEEESS
T ss_pred HcCcccCCCCCcEEEECC
Confidence 986532 2466777754
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=146.11 Aligned_cols=201 Identities=14% Similarity=0.174 Sum_probs=134.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHh------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAI------ 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~------ 74 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. ++.+ ..+.+.. ..+.++.+|++|.+++.+++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ-----KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2221 2233322 34788999999999988887
Q ss_pred --cCCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 75 --KQVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 75 --~~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
.++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...+..
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 156 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA------LAVPYE 156 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT------SCCTTC
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------cCCCCc
Confidence 46999999998532 34445566665 4555 678877 553322 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++..++||.+..++........ .................+.+++|+|++++
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dvA~~v~ 233 (260)
T 2ae2_A 157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENLNKLIDRCALRRMGEPKELAAMVA 233 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccCh---hhHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 7899999999988764 3789999999998876533211100 00000000001111235789999999999
Q ss_pred HHhcCCc--cCCceEEEcCC
Q 021596 202 KAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~ 219 (310)
.++.++. ..|+.+++.|+
T Consensus 234 ~l~s~~~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 234 FLCFPAASYVTGQIIYVDGG 253 (260)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHcCccccCCCCCEEEECCC
Confidence 9886542 24677777543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=145.24 Aligned_cols=195 Identities=17% Similarity=0.161 Sum_probs=131.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ ..+.+.+.......+.++.+|+.|.+++.++++ ++|++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSN-----EEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 5799999999999999999999999999999998 334333222224578899999999999999887 68999
Q ss_pred EEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+||... +.++.++++++ ++.+ ..++|+ ||.... ...+....|+.+|.
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y~~sK~ 161 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGI------AGNPGQANYCASKA 161 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--------CCSCSHHHHHHHH
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhc------cCCCCCchhHHHHH
Confidence 99998643 33445555554 4445 567777 543322 11234678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
..+.+.+. .++++..++||.+...+...+... .............+.+++|+|+++..++.++.
T Consensus 162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 233 (249)
T 3f9i_A 162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK--------QREAIVQKIPLGTYGIPEDVAYAVAFLASNNAS 233 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH--------HHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccC
Confidence 98877753 478999999998876543321110 00000111122467889999999999997543
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
..|+.+++.|
T Consensus 234 ~~tG~~~~vdg 244 (249)
T 3f9i_A 234 YITGQTLHVNG 244 (249)
T ss_dssp TCCSCEEEEST
T ss_pred CccCcEEEECC
Confidence 2477777764
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=142.65 Aligned_cols=204 Identities=14% Similarity=0.147 Sum_probs=130.5
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCch-h-hHhHhhh---cCCcEEEEccCCCHHHHHHHhc--
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK-S-QLLDHFK---NLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~-~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
+.++|+||||+|+||+++++.|+++|++|+++.|+. .+ . ...+.+. ...+.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 77 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD-----AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA 77 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC-----HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc-----chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHH
Confidence 457999999999999999999999999999999983 22 2 1222232 3468889999999999888876
Q ss_pred -----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 -----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..+
T Consensus 78 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~ 150 (260)
T 1x1t_A 78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV------ASA 150 (260)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCT
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCc------CCC
Confidence 6999999998532 33334444444 4555 678877 5533221 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC--CCC-CCeEEEe-cCCCceeEeeccch
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA--APP-RDKVVIL-GDGNPKAVYNKEDD 195 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~i~~~D 195 (310)
....|+.+|...+.+.+. .++++..++||++..++.......... ... ....... ........+.+++|
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d 230 (260)
T 1x1t_A 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHH
Confidence 467899999999887753 478999999999987654322110000 000 0000000 00011235789999
Q ss_pred HHHHHHHHhcCCc--cCCceEEEcC
Q 021596 196 IATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 196 ~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+|++++.++.++. ..|+.+++.|
T Consensus 231 va~~~~~l~s~~~~~~tG~~~~vdg 255 (260)
T 1x1t_A 231 LGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhChhhcCCCCCEEEECC
Confidence 9999999986532 2466777753
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=144.10 Aligned_cols=197 Identities=16% Similarity=0.080 Sum_probs=136.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|++++|+.... ....+.+ ...+.++.+|++|.+++.++++ +
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL----AGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH----HHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH----HHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999984321 1222333 4578999999999999998887 7
Q ss_pred CCEEEEcccchh---------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 77 VDVVISTVGHAL---------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 77 ~d~Vi~~a~~~~---------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
+|++||+|+... +.++.++.+++ ++.+ ..++|+ ||..... ..+....
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~~~ 158 (271)
T 3tzq_B 86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHA------AYDMSTA 158 (271)
T ss_dssp CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS------BCSSCHH
T ss_pred CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcC------CCCCChH
Confidence 999999998641 34455666666 5666 678777 5433221 1234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||.+.+........ ......+........+.+++|+|++++.+
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~r~~~p~dvA~~v~~L 231 (271)
T 3tzq_B 159 YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP-------QPIVDIFATHHLAGRIGEPHEIAELVCFL 231 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C-------HHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC-------HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 58999999999988764321100 00000011111123467899999999999
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.+.. ..|+.+++.|.
T Consensus 232 ~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 232 ASDRAAFITGQVIAADSG 249 (271)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCcccCCcCCCEEEECCC
Confidence 86542 24777777644
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-18 Score=140.92 Aligned_cols=192 Identities=12% Similarity=0.064 Sum_probs=130.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|++++|+.. +. .+.+...++.++.+|++|.+++.++++ +
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-----AS--VTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-----HH--HHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HH--HHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999999999999843 22 233444568999999999999888876 6
Q ss_pred CCEEEEcccchh------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 77 VDVVISTVGHAL------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
+|++||+||... +.++.++.+++. +.+ ..++|+ |+.... ...+....|+.
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------~~~~~~~~Y~a 172 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTR------KGSSKHIAYCA 172 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG------TCCSSCHHHHH
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhc------CCCCCcHhHHH
Confidence 899999998642 344455555553 444 567776 543322 11234678999
Q ss_pred HHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 134 VKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 134 ~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
+|...+.+.+. .++++..++||.+......... ... ..........+..++|+|++++.+++.+
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~------~~~----~~~~~~p~~r~~~~edva~~v~~L~~~~ 242 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA------YRA----NALAKSALGIEPGAEVIYQSLRYLLDST 242 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------------CCSCCCCCTHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH------HHH----HHHhcCCCCCCCCHHHHHHHHHHHhhCC
Confidence 99999887753 2588899999988654221000 000 0000111124567899999999999665
Q ss_pred ccCCceEEEcCC
Q 021596 208 RTLNKNLYIQPP 219 (310)
Q Consensus 208 ~~~~~~~~~~~~ 219 (310)
...|+.+++.|+
T Consensus 243 ~itG~~i~vdGG 254 (260)
T 3gem_A 243 YVTGTTLTVNGG 254 (260)
T ss_dssp SCCSCEEEESTT
T ss_pred CCCCCEEEECCC
Confidence 556788888654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=148.70 Aligned_cols=206 Identities=15% Similarity=0.117 Sum_probs=136.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+. +.+. ...+.+. ...+.++.+|+.|.+++.++++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999942 2222 1223332 3457889999999999998887
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|+|||+|+... +.++.++++++...- +-.++|+ |+...... + .+....|+
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~----~-~~~~~~Y~ 171 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----G-IPNHALYA 171 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----S-CCSCHHHH
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccC----C-CCCCchHH
Confidence 7999999998532 455677777776641 0146766 55332200 1 12357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC----CCC-CCeEEEecCCCceeEeeccchHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA----APP-RDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.+|...+.+.+. .++++++++||.+.+............ ... ......+..+.....+++++|+|+++
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i 251 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAV 251 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence 999999988764 389999999999987643311100000 000 00000111122234689999999999
Q ss_pred HHHhcCCcc--CCceEEEcC
Q 021596 201 IKAVDDPRT--LNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~~--~~~~~~~~~ 218 (310)
+.++.++.. .|+.+++.+
T Consensus 252 ~~l~~~~~~~~~G~~~~v~g 271 (274)
T 1ja9_A 252 SALCQEESEWINGQVIKLTG 271 (274)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCcccccccCcEEEecC
Confidence 999976432 467787754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-19 Score=147.25 Aligned_cols=195 Identities=15% Similarity=0.205 Sum_probs=132.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchhh-HhHhhh--cCCcEE-EEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQ-LLDHFK--NLGVNF-VVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~-~~~~l~--~~~~~~-v~~D~~d~~~~~~~~~--- 75 (310)
|++|+||||+|+||+++++.|+++|++|+++ .|+ +.+.+ ..+.+. ...+.. +.+|+.|.+++.++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQN-----REKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAA 75 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC-----HHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHH
Confidence 4699999999999999999999999999998 676 22222 122232 234666 8999999999888765
Q ss_pred ----CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+|||+|+... +.+ +..+++++++.+ ..++|+ |+..... ..+.
T Consensus 76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~ 148 (245)
T 2ph3_A 76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGIL------GNPG 148 (245)
T ss_dssp HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCSS
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhcc------CCCC
Confidence 7999999998532 223 455666666677 788887 5532211 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .+++++++||+.+.++........ . ... .. .......+++++|+|+++
T Consensus 149 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~--~~-~~~~~~~~~~~~dva~~~ 220 (245)
T 2ph3_A 149 QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE----V-KEA--YL-KQIPAGRFGRPEEVAEAV 220 (245)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----H-HHH--HH-HTCTTCSCBCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH----H-HHH--HH-hcCCCCCCcCHHHHHHHH
Confidence 67899999998877753 389999999999877643321100 0 000 00 001113578999999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.++. ..|+.+++.+
T Consensus 221 ~~l~~~~~~~~~G~~~~v~g 240 (245)
T 2ph3_A 221 AFLVSEKAGYITGQTLCVDG 240 (245)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHhCcccccccCCEEEECC
Confidence 99987642 2367777754
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=143.19 Aligned_cols=196 Identities=19% Similarity=0.194 Sum_probs=132.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. +.+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999932 2222 1222332 2457889999999999988876
Q ss_pred --CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... ..+ ++.++..+++.+ ..++|+ ||..... ..|...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~ 152 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVT------GNPGQA 152 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCTTBH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcC------CCCCCc
Confidence 7999999998542 222 344555555566 678887 5532211 123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .+++++.++||.+..++...... ..... .........+.+++|+|++++.
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~-~~~~~p~~~~~~~~dvA~~~~~ 224 (246)
T 2uvd_A 153 NYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE-------NIKAE-MLKLIPAAQFGEAQDIANAVTF 224 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT-------THHHH-HHHTCTTCSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH-------HHHHH-HHhcCCCCCCcCHHHHHHHHHH
Confidence 899999998877643 58999999999987764332110 00000 0000111247899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.|
T Consensus 225 l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 225 FASDQSKYITGQTLNVDG 242 (246)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCchhcCCCCCEEEECc
Confidence 986542 2467777754
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.4e-19 Score=145.06 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=132.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+... .+.+ ...+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 333321 1222 3468899999999999888776
Q ss_pred CCCEEEEcccchh-------------------hh----hHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LA----DQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~----~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+|+... .. .++.++..+++.+ .++|+ |+.... ...+....|
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~------~~~~~~~~Y 151 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW------LPIEQYAGY 151 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT------SCCTTBHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhc------CCCCCCccH
Confidence 4799999998642 11 2334555555544 67776 553322 112346789
Q ss_pred HHHHHHHHHHHHH-------c--CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------E--GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~--~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+.+|...+.+.+. . ++++++++||.+.+.+........ .......-.........+.+++|+|++++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~ 228 (253)
T 1hxh_A 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh---hhHHHHhhhhccCccCCCCCHHHHHHHHHH
Confidence 9999999887754 3 899999999999876543211100 000000000001111357899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.|
T Consensus 229 l~s~~~~~~tG~~~~vdg 246 (253)
T 1hxh_A 229 LASDESSVMSGSELHADN 246 (253)
T ss_dssp HHSGGGTTCCSCEEEESS
T ss_pred HcCccccCCCCcEEEECC
Confidence 987642 2467777754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=145.47 Aligned_cols=199 Identities=15% Similarity=0.170 Sum_probs=135.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ .++...........+..+.+|++|.+++.++++ +
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN-----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998 333322222224568899999999999888876 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++.+++ ++.+ ..++|+ ||.... ...+....|+
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y~ 174 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTAT------SAIADRTAYV 174 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGT------SCCTTBHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhC------cCCCCChhHH
Confidence 999999999642 34444455555 4444 567776 553322 1223467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE---ecCCCceeEeeccchHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI---LGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.+|...+.+.+. .|+++..++||.+...+....... . ...... .........+.+++|+|++++.
T Consensus 175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----~-~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 249 (277)
T 4dqx_A 175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE----A-KDPAKLRSDFNARAVMDRMGTAEEIAEAMLF 249 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT----C-SCHHHHHHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc----c-cchhHHHHHHHhcCcccCCcCHHHHHHHHHH
Confidence 999999887753 478999999999877542211100 0 000000 1111222357789999999999
Q ss_pred HhcCCc--cCCceEEEcCC
Q 021596 203 AVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~~ 219 (310)
++.+.. ..|+.+++.|+
T Consensus 250 L~s~~~~~itG~~i~vdGG 268 (277)
T 4dqx_A 250 LASDRSRFATGSILTVDGG 268 (277)
T ss_dssp HHSGGGTTCCSCEEEESSS
T ss_pred HhCCccCCCcCCEEEECCc
Confidence 986543 24777777643
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-18 Score=143.25 Aligned_cols=202 Identities=14% Similarity=0.137 Sum_probs=127.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|+++++|+||||+|+||+++++.|+++|++|+++.++. ..+. ...+.+.. ..+.++.+|++|.+++.++++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN----REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV 98 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 44467899999999999999999999999998874442 2222 12222322 357889999999999888776
Q ss_pred -----CCCEEEEcccchh--------------------hhhHHHHHHHHHHc------CCccEEcc-CCCCCCccccCCC
Q 021596 76 -----QVDVVISTVGHAL--------------------LADQVKIIAAIKEA------GNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~------~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
++|+|||+||... +.++.++++++... ++..++|+ |+..... +
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~ 173 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL-----G 173 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH-----C
T ss_pred HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc-----C
Confidence 6899999998632 44455666666543 11356766 5532211 1
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..+....|+.+|...+.+.+. .++++..++||.+.+.+....... . .............+.+++|+
T Consensus 174 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~-~~~~~~~~~~~~~~~~~edv 246 (272)
T 4e3z_A 174 SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP------D-RAREMAPSVPMQRAGMPEEV 246 (272)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------------CCTTSSCBCHHHH
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh------H-HHHHHhhcCCcCCCcCHHHH
Confidence 112346799999999887653 489999999999987643321110 0 00111111122346779999
Q ss_pred HHHHHHHhcCCc--cCCceEEEcC
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
|++++.++.+.. ..|+.+++.|
T Consensus 247 A~~i~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 247 ADAILYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHhCCccccccCCEEeecC
Confidence 999999986542 2467777754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.79 E-value=6.6e-19 Score=145.23 Aligned_cols=194 Identities=16% Similarity=0.154 Sum_probs=132.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+ +.+.+............+.+|++|.++++++++ ++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATS-----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999998 333332222223457889999999999988876 79
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+||... +.++.++.+++ ++.+ ..++|+ ||.... ...+....|+.
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------~~~~~~~~Y~a 157 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGT------MGNAGQANYAA 157 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------HCCTTCHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhc------CCCCCChHHHH
Confidence 99999998643 34445555555 3355 567776 543221 11234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .|+++..++||.+.......... ..............+.+++|+|++++.++.+
T Consensus 158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 229 (248)
T 3op4_A 158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND--------EQRTATLAQVPAGRLGDPREIASAVAFLASP 229 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH--------HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 99998877753 47999999999887654322110 0000000111223578999999999998865
Q ss_pred Cc--cCCceEEEcC
Q 021596 207 PR--TLNKNLYIQP 218 (310)
Q Consensus 207 ~~--~~~~~~~~~~ 218 (310)
.. ..|+.+++.|
T Consensus 230 ~~~~itG~~i~vdg 243 (248)
T 3op4_A 230 EAAYITGETLHVNG 243 (248)
T ss_dssp GGTTCCSCEEEEST
T ss_pred ccCCccCcEEEECC
Confidence 42 2477777754
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=139.94 Aligned_cols=177 Identities=15% Similarity=0.098 Sum_probs=117.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++|+||||+|+||+++++.|+++| ++|+++.|+.. +.+.+..+....+.++.+|++|.+++.++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~-----~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE-----KATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGG-----GCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHH-----HHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999 99999999843 3222222223468999999999999988887
Q ss_pred ---CCCEEEEcccchh--------------------hhhHHHHHHHHHH----c------CC----ccEEcc-CCCCC-C
Q 021596 76 ---QVDVVISTVGHAL--------------------LADQVKIIAAIKE----A------GN----VTRFFP-SEFGN-D 116 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~----~------~~----v~~~v~-s~~~~-~ 116 (310)
++|+|||+|+... +.++.++++++.. . +. ..++|+ |+... .
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 7999999997531 3344555555443 2 20 356666 44322 1
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeE
Q 021596 117 VDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAV 189 (310)
Q Consensus 117 ~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
......+..++...|+.+|+..+.+.+. .++++..++||.+....... ..
T Consensus 158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------~~ 214 (250)
T 1yo6_A 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------------NA 214 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred CCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------------CC
Confidence 1100001113467899999999888753 37999999999876543210 14
Q ss_pred eeccchHHHHHHHHhcCCc
Q 021596 190 YNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 190 ~i~~~D~a~~~~~~l~~~~ 208 (310)
+++++|+|+.++.++..+.
T Consensus 215 ~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 215 ALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp ----HHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHhccc
Confidence 6789999999999997653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=139.43 Aligned_cols=176 Identities=18% Similarity=0.204 Sum_probs=122.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc----
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
|+ +++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ..++.++.+|++|.+++.++++
T Consensus 1 Ms-~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 1 MS-LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR-----YQRLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp ---CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHH
Confidence 54 5789999999999999999999999999999998 3333222 223 3368999999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++..+++++. +.+ .++|. ||.... ...+..
T Consensus 74 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~------~~~~~~ 145 (235)
T 3l6e_A 74 WGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQ------VGKANE 145 (235)
T ss_dssp HHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECC------SSCSSH
T ss_pred hcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhc------CCCCCC
Confidence 6899999999642 344445555553 333 26665 443222 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .|+++..++||.+...+...... .....+.+++|+|++++
T Consensus 146 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~pedvA~~v~ 208 (235)
T 3l6e_A 146 SLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------------VDPSGFMTPEDAAAYML 208 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------CBCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------------CCCcCCCCHHHHHHHHH
Confidence 7899999999887763 47889999999887654321110 01125789999999999
Q ss_pred HHhcCCc
Q 021596 202 KAVDDPR 208 (310)
Q Consensus 202 ~~l~~~~ 208 (310)
.++.++.
T Consensus 209 ~l~~~~~ 215 (235)
T 3l6e_A 209 DALEARS 215 (235)
T ss_dssp HHTCCCS
T ss_pred HHHhCCC
Confidence 9997653
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=145.85 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=134.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|.+.++++||||+|+||+++++.|+++|++|+++ .|+ ..+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS-----KKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 6667899999999999999999999999999987 666 2222 2223332 2358899999999999888776
Q ss_pred ------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 ------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------~~~ 148 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSI------RYL 148 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGT------SBC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhC------CCC
Confidence 5799999998532 34445555555 4445 567777 443322 112
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+....|+.+|+..+.+.+. .++++..++||.+...+....... ...............+.+++|+|+
T Consensus 149 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~~~dva~ 222 (258)
T 3oid_A 149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR------EDLLEDARQNTPAGRMVEIKDMVD 222 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH------HHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC------HHHHHHHHhcCCCCCCcCHHHHHH
Confidence 3467899999999888763 478999999999877654322110 000000000011235788999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
+++.++.+.. ..|+.+++.|.
T Consensus 223 ~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 223 TVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp HHHHHTSSTTTTCCSCEEEESTT
T ss_pred HHHHHhCcccCCccCCEEEECCC
Confidence 9999997643 34777777643
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-19 Score=146.33 Aligned_cols=198 Identities=16% Similarity=0.212 Sum_probs=131.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC-CCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE-STLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+ ... .....+.+. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN----IDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh----HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 322 122223332 2357889999999999998887
Q ss_pred --CCCEEEEcccc-hh-------------------hhhHHHHHHHHH----Hc----CCccEEcc-CCCCCCccccCCCC
Q 021596 76 --QVDVVISTVGH-AL-------------------LADQVKIIAAIK----EA----GNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 --~~d~Vi~~a~~-~~-------------------~~~~~~~~~aa~----~~----~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|+|||+|+. .. +.++.++++++. +. +...++|+ |+..... ..
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~ 157 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT-----GG 157 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH-----CC
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc-----CC
Confidence 79999999986 21 333444444432 21 11256766 4432111 01
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.+....|+.+|...+.+.+. .+++++++||+.+.+........ ........+.....+++++|+|
T Consensus 158 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva 229 (258)
T 3afn_B 158 GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQ--------DVRDRISNGIPMGRFGTAEEMA 229 (258)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCH--------HHHHHHHTTCTTCSCBCGGGTH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCH--------HHHHHHhccCCCCcCCCHHHHH
Confidence 23467899999999988753 38999999999998765332100 0000000111223688999999
Q ss_pred HHHHHHhcCCc---cCCceEEEcC
Q 021596 198 TYTIKAVDDPR---TLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~---~~~~~~~~~~ 218 (310)
++++.++.++. ..|+.+++.+
T Consensus 230 ~~~~~l~~~~~~~~~~G~~~~v~g 253 (258)
T 3afn_B 230 PAFLFFASHLASGYITGQVLDING 253 (258)
T ss_dssp HHHHHHHCHHHHTTCCSEEEEEST
T ss_pred HHHHHHhCcchhccccCCEEeECC
Confidence 99999987542 2467777754
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=144.12 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=130.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. +.+. ...+.+. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC----hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999931 2222 1222332 2347889999999999888876
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +.++.++++++. +.+...++|+ |+.... ...+...
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------~~~~~~~ 156 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------IPWPLFV 156 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------SCCTTCH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc------CCCCCcc
Confidence 7999999998532 333444454443 3321357776 554322 1123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .+++++++|||.+.+.+........ . .............+++++|+|++++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP-----E-QRADVESMIPMGYIGEPEEIAAVAAW 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH-----H-HHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccCh-----h-HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999998877653 4899999999999876543211000 0 00000000111247899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.+
T Consensus 231 l~~~~~~~~~G~~~~v~g 248 (261)
T 1gee_A 231 LASSEASYVTGITLFADG 248 (261)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCccccCCCCcEEEEcC
Confidence 986532 2466777754
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-18 Score=137.28 Aligned_cols=176 Identities=20% Similarity=0.220 Sum_probs=126.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
|++++||||+|+||+++++.|+++|++|+++.|+. ++.+ ..+.+ ....+.++.+|++|.+++.++++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSV-----DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999983 3322 12222 23568899999999999998887
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEccCC-CCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFPSE-FGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~s~-~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++++++.. .+ -..++.++ .+.. ..+..
T Consensus 77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~-------~~~~~ 148 (235)
T 3l77_A 77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTTSDVSAR-------LIPYG 148 (235)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS-------CCTTC
T ss_pred hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEecchhcc-------cCCCc
Confidence 7899999998643 4445556666543 33 23344443 3321 12335
Q ss_pred hhhHHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
..|+.+|+..+.+.+. .++++..++||.+...+....... .....+..++|+|+++..+
T Consensus 149 ~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~----------------~~~~~~~~p~dva~~v~~l 212 (235)
T 3l77_A 149 GGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGK----------------PKEKGYLKPDEIAEAVRCL 212 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCC----------------CGGGTCBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCc----------------ccccCCCCHHHHHHHHHHH
Confidence 7899999999888764 489999999998876543322110 0111568899999999999
Q ss_pred hcCCc
Q 021596 204 VDDPR 208 (310)
Q Consensus 204 l~~~~ 208 (310)
+.++.
T Consensus 213 ~~~~~ 217 (235)
T 3l77_A 213 LKLPK 217 (235)
T ss_dssp HTSCT
T ss_pred HcCCC
Confidence 98764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-18 Score=141.70 Aligned_cols=199 Identities=12% Similarity=0.016 Sum_probs=133.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.++++||||+|+||+++++.|+++|++|++++|+ ..+.+.........++++.+|++|.+++.++++ ++|++
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRD-----TRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 3689999999999999999999999999999998 333322211113468999999999999999988 57999
Q ss_pred EEcccchh-----------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCcc---c-----cCCCCCCcchhhHHH
Q 021596 81 ISTVGHAL-----------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVD---R-----AHGAVEPAKSVYYDV 134 (310)
Q Consensus 81 i~~a~~~~-----------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~---~-----~~~~~~~~~~~y~~~ 134 (310)
||+||... +.++.++++++.... .+++|+ ||...... . .. ...++...|+.+
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~s 168 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRS-RRYSPWLAYSQS 168 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSS-SCCCHHHHHHHH
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccc-cCCCCcchHHHH
Confidence 99999642 667788999998876 678887 44221111 0 11 112346789999
Q ss_pred HHHHHHHHHH-------cC--CCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 135 KARIRRAVEA-------EG--IPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 135 K~~~e~~l~~-------~~--~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
|...+.+.+. .+ +++..++||.+...+....... ....... .-..+-..+++|+|+.++.++.
T Consensus 169 K~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~A~~~~~l~~ 240 (291)
T 3rd5_A 169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK----LGDALMS----AATRVVATDADFGARQTLYAAS 240 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH----HHHHHHH----HHHHHHhCCHHHHHHHHHHHHc
Confidence 9998877653 35 8889999999877654432111 0000000 0111223458999999999998
Q ss_pred CCccCCceEEEc
Q 021596 206 DPRTLNKNLYIQ 217 (310)
Q Consensus 206 ~~~~~~~~~~~~ 217 (310)
++...|+.+.+.
T Consensus 241 ~~~~~G~~~~vd 252 (291)
T 3rd5_A 241 QDLPGDSFVGPR 252 (291)
T ss_dssp SCCCTTCEEEET
T ss_pred CCCCCCceeCCc
Confidence 765455655553
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=141.77 Aligned_cols=198 Identities=15% Similarity=0.178 Sum_probs=135.3
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|+. .++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQ-----ASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 443 57899999999999999999999999999999983 2322 222332 2458899999999999888776
Q ss_pred ------CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 ------QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+|+... ..++.++++++. +.+ ..++|+ |+.... ...
T Consensus 76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~ 148 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGS------AGN 148 (247)
T ss_dssp HHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHH------HCC
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc------cCC
Confidence 5899999998652 334445555543 344 457776 443221 112
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|...+.+.+. .++++..++||++.......+.. ..............+.+++|+|+
T Consensus 149 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~ 220 (247)
T 3lyl_A 149 PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD--------EQKSFIATKIPSGQIGEPKDIAA 220 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH--------HHHHHHHTTSTTCCCBCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH--------HHHHHHhhcCCCCCCcCHHHHHH
Confidence 3467899999988877753 47899999999887764332211 00011112223346889999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
++..++.+.. ..|+.+++.|
T Consensus 221 ~i~~l~s~~~~~~tG~~i~vdg 242 (247)
T 3lyl_A 221 AVAFLASEEAKYITGQTLHVNG 242 (247)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCCCcCCccCCEEEECC
Confidence 9999886543 2477777754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=144.31 Aligned_cols=199 Identities=12% Similarity=0.048 Sum_probs=133.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ ..+.+.........+.++.+|++|.+++.++++ +
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADID-----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 333322222224578999999999999888776 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++.+++ ++.+ ..++|+ ||.... ...+....|+
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~------~~~~~~~~Y~ 176 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQ------VAVGGTGAYG 176 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------SCCTTBHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------cCCCCchhHH
Confidence 899999998643 33444455554 3445 567776 553322 1223467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC---CCceeEeeccchHHHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD---GNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~ 202 (310)
.+|...+.+.+. .|+++..++||.+.+.......... .......... ......+.+++|+|++++.
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 252 (277)
T 3gvc_A 177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMF----DGALGAGGARSMIARLQGRMAAPEEMAGIVVF 252 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC----------CCHHHHHHHHHSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcc----hhhHHHHhhhhhhhccccCCCCHHHHHHHHHH
Confidence 999999887753 5899999999999876433221110 0000000000 0111357889999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. ..|+.+++.|
T Consensus 253 L~s~~a~~itG~~i~vdG 270 (277)
T 3gvc_A 253 LLSDDASMITGTTQIADG 270 (277)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCCccCCccCcEEEECC
Confidence 996542 2467777764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.3e-19 Score=145.29 Aligned_cols=187 Identities=18% Similarity=0.180 Sum_probs=132.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------~~d 78 (310)
++|+||||+|+||+++++.|+++|++|++++|+.. ...+.++.+|++|.+++.++++ ++|
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d 68 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF 68 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------------ccceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence 79999999999999999999999999999999843 1245889999999999999887 789
Q ss_pred EEEEcccchh-----------------------hhhHHHHHHHHHHcC---------CccEEcc-CCCCCCccccCCCCC
Q 021596 79 VVISTVGHAL-----------------------LADQVKIIAAIKEAG---------NVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 79 ~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~---------~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++||+++... +.++.++++++...- ...++|+ |+..... ..
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~ 142 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------GQ 142 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------CC
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc------CC
Confidence 9999998531 445566777776531 1127776 5432211 12
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccchHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDDIA 197 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a 197 (310)
+....|+.+|...+.+.+. .+++++++|||.+.+.......... .......... ..+++++|+|
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva 214 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKA--------KASLAAQVPFPPRLGRPEEYA 214 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHH--------HHHHHTTCCSSCSCCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhH--------HHHHHhhCCCcccCCCHHHHH
Confidence 2367899999998877653 3899999999999876533211100 0000000011 2478899999
Q ss_pred HHHHHHhcCCccCCceEEEcCC
Q 021596 198 TYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
++++.++.++...|+.+++.+.
T Consensus 215 ~~~~~l~~~~~~~G~~~~v~gG 236 (242)
T 1uay_A 215 ALVLHILENPMLNGEVVRLDGA 236 (242)
T ss_dssp HHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHhcCCCCCCcEEEEcCC
Confidence 9999999875556778888643
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=143.53 Aligned_cols=195 Identities=16% Similarity=0.152 Sum_probs=132.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ ..+.+.........+.++.+|++|.+++.++++ +
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 333322222224568999999999999988876 7
Q ss_pred CCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.+ ++.++..+++.+ ..++|+ ||..... ..+....|+
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~------~~~~~~~Y~ 174 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVV------GNPGQTNYC 174 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------------CHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcC------CCCCchhHH
Confidence 999999999643 333 344555555566 577777 5433221 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+...+....... .............+.+++|+|++++.++.
T Consensus 175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~~edvA~~v~~L~s 246 (266)
T 3grp_A 175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK--------QKEAIMAMIPMKRMGIGEEIAFATVYLAS 246 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999998877653 478999999999877543221100 00001111122356789999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. ..|+.+++.|
T Consensus 247 ~~~~~itG~~i~vdG 261 (266)
T 3grp_A 247 DEAAYLTGQTLHING 261 (266)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCccCCEEEECC
Confidence 542 2467777754
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.4e-18 Score=143.72 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=125.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQ-----PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999983 3322 223333 2458899999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++ ++.+...++|+ ||.... ...+....
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~ 180 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL------VPNAGLGT 180 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT------SCCTTBHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc------CCCCCchH
Confidence 7999999999642 44455566655 33332356766 553322 12234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC--CCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG--AAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
|+.+|...+.+.+. .|+++..++||.+...+........ ...........++.......+++++|+|++++
T Consensus 181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~ 260 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTA 260 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHH
Confidence 99999998877653 4789999999999876543211100 00000111111222223356899999999999
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
.+++.+
T Consensus 261 ~~l~~~ 266 (301)
T 3tjr_A 261 DAILAN 266 (301)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999865
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-18 Score=144.33 Aligned_cols=206 Identities=14% Similarity=0.151 Sum_probs=135.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|.+.++++||||+|+||+++++.|+++|++|+++.|+ ..+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD-----AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4445789999999999999999999999999999998 3332 2223333 2458899999999999888776
Q ss_pred -----CCCEEEEcccchh-------------------hhhHHHHHHHHHH------cCCccEEcc-CCCCCCccccCCCC
Q 021596 76 -----QVDVVISTVGHAL-------------------LADQVKIIAAIKE------AGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~------~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|++||+||... +.++.++++++.. .+ ..++|+ ||.... ..
T Consensus 96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~------~~ 168 (279)
T 3sju_A 96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGK------QG 168 (279)
T ss_dssp HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGT------SC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhc------cC
Confidence 6899999998643 4455666666544 45 567777 553322 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCC--CC-CeEEEecCCCceeEeeccc
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAP--PR-DKVVILGDGNPKAVYNKED 194 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~i~~~ 194 (310)
.+....|+.+|...+.+.+. .|+++..++||.+...+............ .. .....+........+.+++
T Consensus 169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 248 (279)
T 3sju_A 169 VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE 248 (279)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH
Confidence 23467899999998887753 57899999999987754332111000000 00 0000111112223578899
Q ss_pred hHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 195 DIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 195 D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
|+|++++.++.+.. ..|+.+++.|
T Consensus 249 dvA~~v~~L~s~~a~~itG~~i~vdG 274 (279)
T 3sju_A 249 EVAGLVGYLVTDAAASITAQALNVCG 274 (279)
T ss_dssp HHHHHHHHHTSSGGGGCCSCEEEEST
T ss_pred HHHHHHHHHhCccccCcCCcEEEECC
Confidence 99999999887643 3477777754
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.9e-18 Score=142.88 Aligned_cols=197 Identities=14% Similarity=0.183 Sum_probs=132.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+ ....+.++.+|++|.+++.++++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 33322 12222 13457889999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCC-CCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFG-NDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~-~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+.. .. ...+.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~ 168 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE------VTMPN 168 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC------CCSSS
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhc------cCCCC
Confidence 6999999998642 33444555554 4445 678877 5543 21 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .|+++.+++||++...+....... ...............+.+++|+|+++
T Consensus 169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~p~dvA~~v 242 (267)
T 1vl8_A 169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD------PEKLDYMLKRIPLGRTGVPEDLKGVA 242 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC------HHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC------hHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence 67899999999987754 489999999999877653321100 00000000000112478899999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.++. ..|+.+.+.|
T Consensus 243 ~~l~s~~~~~itG~~i~vdG 262 (267)
T 1vl8_A 243 VFLASEEAKYVTGQIIFVDG 262 (267)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHcCccccCCcCCeEEECC
Confidence 99986542 2466676653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=142.35 Aligned_cols=201 Identities=16% Similarity=0.134 Sum_probs=134.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS-----EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2222 122222 3458889999999999988876
Q ss_pred ----CCCEEEEcccchh--------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 ----QVDVVISTVGHAL--------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~--------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... + ..++.++..+++.+ ..++|+ |+..... ..+
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~ 160 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR------GIG 160 (267)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS------BCS
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcc------CCC
Confidence 6899999998531 1 22345566666666 678877 5533221 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc--C-CCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL--L-QPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
....|+.+|...+.+.+. .|+++..++||.+.+++.... . ... .................+.+++|+
T Consensus 161 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~~dv 237 (267)
T 1iy8_A 161 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE---NPRKAAEEFIQVNPSKRYGEAPEI 237 (267)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT---CHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh---hhhhHHHHHhccCCCCCCcCHHHH
Confidence 467899999999887753 489999999999887653221 0 000 000000000011111347899999
Q ss_pred HHHHHHHhcCCc--cCCceEEEcCC
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
|++++.++.++. ..|+.+.+.|+
T Consensus 238 A~~v~~l~s~~~~~~tG~~i~vdGG 262 (267)
T 1iy8_A 238 AAVVAFLLSDDASYVNATVVPIDGG 262 (267)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHcCccccCCCCCEEEECCC
Confidence 999999986542 24677777543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.5e-18 Score=138.14 Aligned_cols=177 Identities=15% Similarity=0.186 Sum_probs=119.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC----CE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV----DV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~----d~ 79 (310)
|++|+||||+|+||+++++.|+++|++|++++|+ +++.+.........+.++.+|+.|.+++.++++.+ |+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRS-----ESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 5689999999999999999999999999999998 33332222212356889999999999999998854 89
Q ss_pred EEEcccchh-------------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCCCcchhhHHHHHH
Q 021596 80 VISTVGHAL-------------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 80 Vi~~a~~~~-------------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
+||+|+... +.++.++++++...- +-.++|+ |+.... ...+....|+.+|..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~------~~~~~~~~Y~asKaa 149 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ------QPKAQESTYCAVKWA 149 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT------SCCTTCHHHHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC------CCCCCCchhHHHHHH
Confidence 999998542 444555666655431 0126665 443322 122346789999999
Q ss_pred HHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 138 IRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 138 ~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+.+.+. .++++..++||.+...+...... . .....+.+++|+|++++.++.++
T Consensus 150 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~-------~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 150 VKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---------S-------LDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp HHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---------C-------CCcccCCCHHHHHHHHHHHHhCc
Confidence 9887753 37899999999887654332111 0 11236789999999999998755
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.9e-18 Score=140.52 Aligned_cols=193 Identities=15% Similarity=0.091 Sum_probs=114.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA-----EAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 2322 2233322 357889999999999988876
Q ss_pred --CCCEEEEcccch---h-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 --QVDVVISTVGHA---L-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 --~~d~Vi~~a~~~---~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+|+.. . +.+ ++.++..+++.+ ..++|+ |+.... +
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---------~ 153 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---------L 153 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---------C
Confidence 799999999862 1 223 444555556666 577777 543321 1
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++..++||.+.+......... ..............+.+++|+|++
T Consensus 154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~ 226 (253)
T 3qiv_A 154 YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK-------EMVDDIVKGLPLSRMGTPDDLVGM 226 (253)
T ss_dssp ------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------CCHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH-------HHHHHHhccCCCCCCCCHHHHHHH
Confidence 245799999998887753 378899999999887643321110 000111111222356789999999
Q ss_pred HHHHhcCCcc--CCceEEEcC
Q 021596 200 TIKAVDDPRT--LNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~~--~~~~~~~~~ 218 (310)
++.++.+... .|+.+++.+
T Consensus 227 ~~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 227 CLFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp HHHHHSGGGTTCCSCEEEC--
T ss_pred HHHHcCccccCCCCCEEEECC
Confidence 9999865432 467777754
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.7e-19 Score=145.61 Aligned_cols=182 Identities=16% Similarity=0.210 Sum_probs=128.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+ .++. +.+....+.++.+|++|.+++.++++ ++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-----VERL---KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHH---HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 689999999999999999999999999999998 3232 33334578899999999999888876 78
Q ss_pred CEEEEcccchh-------------------hhhHHH----HHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVK----IIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~----~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+||... +.++.+ ++..+++.+ ..++|+ ||.... ...+....|+.
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~------~~~~~~~~Y~a 161 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK------KTFPDHAAYCG 161 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------SCCTTCHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC------CCCCCCchHHH
Confidence 99999999642 333444 444445566 678877 553322 11234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC-CCceeEeeccchHHHHHHHHhc
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD-GNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+|...+.+.+. .|+++..++||.+...+....... ........ ......+++++|+|++++.++.
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~r~~~pedvA~av~~l~~ 234 (266)
T 3p19_A 162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ-------QIKDGYDAWRVDMGGVLAADDVARAVLFAYQ 234 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH-------HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccch-------hhhHHHHhhcccccCCCCHHHHHHHHHHHHc
Confidence 99999877653 589999999999987654322110 00000000 0011247889999999999998
Q ss_pred CCc
Q 021596 206 DPR 208 (310)
Q Consensus 206 ~~~ 208 (310)
++.
T Consensus 235 ~~~ 237 (266)
T 3p19_A 235 QPQ 237 (266)
T ss_dssp SCT
T ss_pred CCC
Confidence 764
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-18 Score=138.27 Aligned_cols=175 Identities=16% Similarity=0.156 Sum_probs=126.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++|+||||+|+||+++++.|+++|+ +|+++.|+ +.+.+ ..+.+. ...+.++.+|+.|.+++.++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRL 76 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC-----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHH
Confidence 37899999999999999999999998 89999997 32322 222232 23478899999999999888
Q ss_pred hc-------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCC
Q 021596 74 IK-------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++ ++|+|||+||... +.++.++++++ ++.+ ..++|+ |+.....
T Consensus 77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----- 150 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK----- 150 (244)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-----
T ss_pred HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcC-----
Confidence 76 6999999998532 44455566665 3445 678877 5533221
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccch
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 195 (310)
..+....|+.+|...+.+.+. .+++++++|||.+.+........ . . ...+++++|
T Consensus 151 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~---------~-~~~~~~~~d 212 (244)
T 2bd0_A 151 -AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------E---------M-QALMMMPED 212 (244)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------T---------T-GGGSBCHHH
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------c---------c-cccCCCHHH
Confidence 123467899999999887642 57899999999988765332110 0 0 126789999
Q ss_pred HHHHHHHHhcCC
Q 021596 196 IATYTIKAVDDP 207 (310)
Q Consensus 196 ~a~~~~~~l~~~ 207 (310)
+|++++.++.++
T Consensus 213 va~~~~~l~~~~ 224 (244)
T 2bd0_A 213 IAAPVVQAYLQP 224 (244)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHhCC
Confidence 999999999765
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-18 Score=141.20 Aligned_cols=197 Identities=15% Similarity=0.104 Sum_probs=130.5
Q ss_pred CceEEEEccCc-chhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh---cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTG-YIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK---NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+| .||+++++.|+++|++|++++|+. .+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE-----RRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 46899999998 599999999999999999999983 222 2223332 2468999999999999888876
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+|+... +.++.++++++... +...++|+ |+.... ...+.
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~~~ 170 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW------RAQHS 170 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT------CCCTT
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc------CCCCC
Confidence 6899999999642 44455566665543 22466776 443222 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||.+...+....... ..............+.+++|+|+++
T Consensus 171 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~dva~~i 243 (266)
T 3o38_A 171 QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS-------ELLDRLASDEAFGRAAEPWEVAATI 243 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------CCTTSSCCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH-------HHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 67899999999887753 578999999998877654322111 1111111122234578999999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. ..|+.+++.|
T Consensus 244 ~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 244 AFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHcCccccCccCCEEEEcC
Confidence 99986532 3467777754
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=142.83 Aligned_cols=199 Identities=20% Similarity=0.169 Sum_probs=132.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+++++||||+|+||+++++.|+++|++|+++.|+... ........+. ...+.++.+|++|.+++.++++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERND---HVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHH---HHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchH---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999865321 1111122222 2458999999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+.... ...+....
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 174 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGS------RGAFGQAN 174 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------HCCTTBHH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhc------cCCCCcch
Confidence 7999999998642 33344455544 3455 567776 553221 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+...+........ ... ..........+.+++|+|++++.+
T Consensus 175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~---~~~~~~~~~~~~~p~dvA~~v~~L 247 (269)
T 3gk3_A 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV----LEA---KILPQIPVGRLGRPDEVAALIAFL 247 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------C---CSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH----HHH---HhhhcCCcCCccCHHHHHHHHHHH
Confidence 99999998877653 4789999999998776543321110 000 011111223567899999999999
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.++. ..|+.+++.|+
T Consensus 248 ~s~~~~~itG~~i~vdgG 265 (269)
T 3gk3_A 248 CSDDAGFVTGADLAINGG 265 (269)
T ss_dssp TSTTCTTCCSCEEEESTT
T ss_pred hCCCcCCeeCcEEEECCC
Confidence 87643 34777887643
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-17 Score=139.08 Aligned_cols=186 Identities=15% Similarity=0.097 Sum_probs=120.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ .++...........+.++.+|++|.+++.++++ +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 333322222123578999999999999988876 7
Q ss_pred CCEEEEcccchh--------------------hhhHHHHHHHH----HHcCC-ccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 77 VDVVISTVGHAL--------------------LADQVKIIAAI----KEAGN-VTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 77 ~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~-v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
+|++||+||... +.++.++.+++ ++.+. -.++|+ ||.... ...+....
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~------~~~~~~~~ 176 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT------SPRPYSAP 176 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT------SCCTTCHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc------CCCCCchH
Confidence 999999998632 33444444444 33320 246776 443322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+...+...+... ... . ........+.+++|+|++++.+
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~---~--~~~~~~~~~~~pedvA~~v~fL 247 (272)
T 4dyv_A 177 YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQ---A--DLSIKVEPVMDVAHVASAVVYM 247 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chh---h--hhcccccCCCCHHHHHHHHHHH
Confidence 99999999888753 478999999999887654332111 000 0 0011223578999999999999
Q ss_pred hcCCcc
Q 021596 204 VDDPRT 209 (310)
Q Consensus 204 l~~~~~ 209 (310)
+.++..
T Consensus 248 ~s~~~~ 253 (272)
T 4dyv_A 248 ASLPLD 253 (272)
T ss_dssp HHSCTT
T ss_pred hCCCCc
Confidence 987643
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=143.46 Aligned_cols=200 Identities=18% Similarity=0.170 Sum_probs=131.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+.+.. ..++.++.+|++|.+++.++++ ++|++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 78 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHh--ccCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999999999999999998 333322221 2368899999999999887754 78999
Q ss_pred EEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+|+... ..++.++++++ ++.+ ..++|+ |+..... +..+....|+.+|.
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV-----KGVVNRCVYSTTKA 152 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT-----BCCTTBHHHHHHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCc-----CCCCCCccHHHHHH
Confidence 99998532 33344455554 3455 678877 5533221 11114678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
..+.+.+. .++++++++||.+.+.+......... ........+........+.+++|+|++++.++.++.
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~ 230 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG--NPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA 230 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS--SHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhccc--CcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccc
Confidence 99888764 38999999999998764322100000 000000000000011246789999999999986543
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
..|+.+.+.|
T Consensus 231 ~~tG~~i~vdg 241 (246)
T 2ag5_A 231 YVTGNPVIIDG 241 (246)
T ss_dssp TCCSCEEEECT
T ss_pred CCCCCEEEECC
Confidence 2467777753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=143.28 Aligned_cols=197 Identities=16% Similarity=0.108 Sum_probs=134.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc---CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN---LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~---~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. ++.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRST-----ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 3322 2233332 468899999999999988876
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++++++.. .+ ..++|+ ||..... ...|..
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~~ 158 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPI-----TGYPGW 158 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTT-----BCCTTC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcc-----CCCCCC
Confidence 7999999998642 3444555555543 46 567776 5433211 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .|+++..++||.+.+......... .............+.+++|+|+++.
T Consensus 159 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 159 SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE--------YIASMARSIPAGALGTPEDIGHLAA 230 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH--------HHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 7899999999888764 589999999999877543211000 0000000111124678999999999
Q ss_pred HHhcCCc--cCCceEEEcCC
Q 021596 202 KAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~ 219 (310)
.++.+.. ..|+.+++.|.
T Consensus 231 ~L~s~~~~~itG~~i~vdGG 250 (262)
T 3pk0_A 231 FLATKEAGYITGQAIAVDGG 250 (262)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCccccCCcCCEEEECCC
Confidence 9886542 34777777643
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=146.90 Aligned_cols=220 Identities=11% Similarity=0.066 Sum_probs=144.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC------CCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST------LSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.. ..........+.+.. ..+.++.+|++|.+++.++++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 368999999999999999999999999999998721 000122233344433 347788999999999888876
Q ss_pred -------CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC----C-----ccEEcc-CCCCCCccc
Q 021596 76 -------QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG----N-----VTRFFP-SEFGNDVDR 119 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~----~-----v~~~v~-s~~~~~~~~ 119 (310)
++|++||+||... +.++.++++++...- . -.++|+ ||.....
T Consensus 107 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-- 184 (322)
T 3qlj_A 107 TAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ-- 184 (322)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH--
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc--
Confidence 7999999999643 444455666554321 0 036776 5432211
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeec
Q 021596 120 AHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 120 ~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
..+....|+.+|..++.+.+. .|+++..++|| +........... .. ........+..
T Consensus 185 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~--------~~---~~~~~~~~~~~ 248 (322)
T 3qlj_A 185 ----GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE--------MM---ATQDQDFDAMA 248 (322)
T ss_dssp ----CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------------CCTTC
T ss_pred ----CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh--------hh---hccccccCCCC
Confidence 112357899999999887753 57899999998 544332221110 00 01122235678
Q ss_pred cchHHHHHHHHhcCCc--cCCceEEEcCCC----------------CccCHHHHHHHHHHHhCCCce
Q 021596 193 EDDIATYTIKAVDDPR--TLNKNLYIQPPG----------------NIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~~--~~~~~~~~~~~~----------------~~~s~~e~~~~~~~~~g~~~~ 241 (310)
++|+|.+++.++.+.. ..|+.+++.|+. ...+..|+++.+.+.+|.+.+
T Consensus 249 pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 249 PENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp GGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 9999999999986542 246777765432 123779999999999986543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=143.23 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=130.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEE-EcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVL-VRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++|+||||+|+||+++++.|+++|++|+++ .|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS-----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999985 676 22221 112222 2457889999999999998886
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +.++.++++++.+ .+ ..++|+ |+..... ..+...
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~------~~~~~~ 149 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI------GNIGQA 149 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCTTCH
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC------CCCCCc
Confidence 6999999998532 3445555666544 45 678877 5532211 112357
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++++++||.+.+......... .. .. .........+++++|+|++++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~-~~---~~~~~~~~~~~~~~dva~~~~~ 221 (244)
T 1edo_A 150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED----ME-KK---ILGTIPLGRTGQPENVAGLVEF 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH----HH-HH---HHTSCTTCSCBCHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChH----HH-HH---HhhcCCCCCCCCHHHHHHHHHH
Confidence 899999998877653 478999999999887643221100 00 00 0000111247899999999999
Q ss_pred HhcCCc---cCCceEEEcC
Q 021596 203 AVDDPR---TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~---~~~~~~~~~~ 218 (310)
++..+. ..|+.+++.+
T Consensus 222 l~~~~~~~~~~G~~~~v~g 240 (244)
T 1edo_A 222 LALSPAASYITGQAFTIDG 240 (244)
T ss_dssp HHHCSGGGGCCSCEEEEST
T ss_pred HhCCCccCCcCCCEEEeCC
Confidence 985442 2467777754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=138.85 Aligned_cols=187 Identities=18% Similarity=0.247 Sum_probs=122.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|.+.++++||||+|+||+++++.|+++|++|++++|+. .+. ...+.+.. ..+.++.+|++|.+++.++++
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQ-----ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 55568999999999999999999999999999999983 332 22233333 347788999999999888776
Q ss_pred -----CCCEEEEcccchh-------------------hhhHHHHH----HHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 -----QVDVVISTVGHAL-------------------LADQVKII----AAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-------------------~~~~~~~~----~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... +.++..+. ..+++.+ ..++|+ ||.... ...+
T Consensus 76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------~~~~ 148 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGAL------SVVP 148 (264)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------CCCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHc------ccCC
Confidence 6999999998643 33333344 4444455 567776 553322 1123
Q ss_pred cchhhHHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
....|+.+|...+.+.+. .++++..++||++...+....... ....... .....+..++|+|++++
T Consensus 149 ~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~--~~~~~~~~pedvA~~v~ 219 (264)
T 3tfo_A 149 TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE-------ETMAAMD--TYRAIALQPADIARAVR 219 (264)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------------CCCHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch-------hHHHHHH--hhhccCCCHHHHHHHHH
Confidence 467899999998877653 378889999998876654322111 0000000 01112578999999999
Q ss_pred HHhcCCc
Q 021596 202 KAVDDPR 208 (310)
Q Consensus 202 ~~l~~~~ 208 (310)
.++.++.
T Consensus 220 ~l~s~~~ 226 (264)
T 3tfo_A 220 QVIEAPQ 226 (264)
T ss_dssp HHHHSCT
T ss_pred HHhcCCc
Confidence 9998764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-18 Score=141.10 Aligned_cols=201 Identities=17% Similarity=0.172 Sum_probs=130.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++++||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999998 32322 222332 2357889999999999988887
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHH----HHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIA----AIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~----aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++ .+++.+...++|+ ||..... ..+....
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~ 151 (256)
T 1geg_A 78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------GNPELAV 151 (256)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------CCTTBHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC------CCCCchh
Confidence 7999999998532 223333444 4444331357776 5433221 1234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccC----C-CCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLL----Q-PGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|+.+|...+.+.+. .++++..++||++.+.+..... . ... ........+........+.+++|+|+
T Consensus 152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~ 229 (256)
T 1geg_A 152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGK--PLGYGTAEFAKRITLGRLSEPEDVAA 229 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTC--CTTHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccC--ChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 99999999887753 4899999999999876432210 0 000 00000000000011124789999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.++. ..|+.+.+.|
T Consensus 230 ~v~~l~s~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 230 CVSYLASPDSDYMTGQSLLIDG 251 (256)
T ss_dssp HHHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHHhCccccCCCCCEEEeCC
Confidence 9999986542 2467777754
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=142.08 Aligned_cols=197 Identities=15% Similarity=0.159 Sum_probs=134.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +...+..+.+.. ..+.++.+|++|.+++.++.+
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999999999976 333334444433 347889999999998887754
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+.... ...+....|
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------~~~~~~~~Y 178 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSF------QGGRNVAAY 178 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCSSCHHH
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhc------CCCCCChhH
Confidence 7999999998643 34445555554 4555 567776 553322 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .|+++..++||.+........... ...............+.+++|+|++++.++
T Consensus 179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~v~~L~ 252 (273)
T 3uf0_A 179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD------DERAAEITARIPAGRWATPEDMVGPAVFLA 252 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS------HHHHHHHHHHSTTSSCBCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 9999999887753 579999999999877543322110 000000000011135788999999999998
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.+.. ..|+.+++.|
T Consensus 253 s~~a~~itG~~i~vdG 268 (273)
T 3uf0_A 253 SDAASYVHGQVLAVDG 268 (273)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CchhcCCcCCEEEECc
Confidence 7532 3477777754
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=141.09 Aligned_cols=201 Identities=16% Similarity=0.179 Sum_probs=136.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS-----EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2222 222332 2458889999999999888876
Q ss_pred --CCCEEEEcccchh------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 --QVDVVISTVGHAL------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...+....
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 159 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGE------NTNVRMAS 159 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGT------CCCTTCHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHc------CCCCCchH
Confidence 7999999998642 34455555555 4455 567776 543322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+........... ..............+.+++|+|++++.+
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~~~dva~~~~~L 232 (256)
T 3gaf_A 160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTP-------EIERAMLKHTPLGRLGEAQDIANAALFL 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCH-------HHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCH-------HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999888753 478999999999877643322110 0000011111223578899999999999
Q ss_pred hcCCc--cCCceEEEcCCCCccC
Q 021596 204 VDDPR--TLNKNLYIQPPGNIYS 224 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~~~~~s 224 (310)
+.+.. ..|+.+++.|.. ..+
T Consensus 233 ~s~~~~~itG~~i~vdgG~-~~~ 254 (256)
T 3gaf_A 233 CSPAAAWISGQVLTVSGGG-VQE 254 (256)
T ss_dssp HSGGGTTCCSCEEEESTTS-CCC
T ss_pred cCCcccCccCCEEEECCCc-ccc
Confidence 86532 247778876543 443
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=143.97 Aligned_cols=203 Identities=14% Similarity=0.161 Sum_probs=133.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+.... ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA----VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH----HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh----HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999974321 11222221 3568899999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccc-cCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDR-AHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~-~~~~~~~~~ 128 (310)
++|+|||+|+... +.++.++++++.. .+...++|+ |+....... .......+.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 169 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ 169 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccc
Confidence 4899999998632 3445566666543 232367777 543221110 000011125
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++++++||.+.+......... .............+++++|+|++++
T Consensus 170 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~ 241 (265)
T 1h5q_A 170 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK--------IRDHQASNIPLNRFAQPEEMTGQAI 241 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH--------HHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh--------HHHHHHhcCcccCCCCHHHHHHHHH
Confidence 7899999999888754 489999999999987654322100 0000000011124789999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.++. ..|+.+++.+
T Consensus 242 ~l~~~~~~~~~G~~~~v~g 260 (265)
T 1h5q_A 242 LLLSDHATYMTGGEYFIDG 260 (265)
T ss_dssp HHHSGGGTTCCSCEEEECT
T ss_pred hhccCchhcCcCcEEEecC
Confidence 9987542 3567777764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-19 Score=147.42 Aligned_cols=202 Identities=16% Similarity=0.154 Sum_probs=133.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGE-----EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999983 2221 223332 2357889999999999888876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH------cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE------AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~------~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+||... +.++.++++++.. .+ ..++|+ |+..... ..+..
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~ 170 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQ------GVVHA 170 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTS------CCTTC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECcccccc------CCCCC
Confidence 6999999998532 4445556666544 35 578877 5543221 12346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCC--CCCCCC-CCeEEEecCCCceeEeeccchHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQP--GAAAPP-RDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
..|+.+|...+.+.+. .++++++++||.+.+++....... ...... ...............+++++|+|+
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~ 250 (277)
T 2rhc_B 171 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 7899999999887754 478999999999887643221000 000000 000000000011135789999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.++. ..|+.+++.|
T Consensus 251 ~v~~l~s~~~~~~tG~~~~vdG 272 (277)
T 2rhc_B 251 MVAYLIGPGAAAVTAQALNVCG 272 (277)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCCCCcEEEECC
Confidence 9999987542 2467777754
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=142.87 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=136.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-------Cch-hhHhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-------PSK-SQLLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~-~~~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++++||||+|+||+++++.|+++|++|++++|+..... ... ....+.+. ...+.++.+|++|.+++.++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 378999999999999999999999999999999743210 111 11112222 24588899999999998888
Q ss_pred hc-------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCC
Q 021596 74 IK-------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++ ++|++||+||... +.++.++++++ ++.+ ..++|+ ||....
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------ 162 (281)
T 3s55_A 90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH------ 162 (281)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc------
Confidence 76 7999999998643 44455555554 4455 567777 553322
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccC--CCCCCCCCCCeE-----EEecCCCcee
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLL--QPGAAAPPRDKV-----VILGDGNPKA 188 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~ 188 (310)
...+....|+.+|...+.+.+. .|+++..++||.+.+....... ............ ........+.
T Consensus 163 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (281)
T 3s55_A 163 SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYA 242 (281)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSC
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCc
Confidence 1223467899999999887753 4799999999999876543100 000000000000 0001112225
Q ss_pred EeeccchHHHHHHHHhcCCcc--CCceEEEcCC
Q 021596 189 VYNKEDDIATYTIKAVDDPRT--LNKNLYIQPP 219 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~~--~~~~~~~~~~ 219 (310)
.+.+++|+|++++.++.++.. .|+.+++.|+
T Consensus 243 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 275 (281)
T 3s55_A 243 PFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 788999999999999976432 3777887643
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.3e-18 Score=139.63 Aligned_cols=192 Identities=18% Similarity=0.184 Sum_probs=127.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+ +++ ..+.+ ++..+.+|++| +++.++++ ++
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~--~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~i 71 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRN-----PEE--AAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGL 71 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----CHH--HHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHH--HHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence 789999999999999999999999999999998 323 22333 48889999998 76665543 79
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+|+... +.++.++.+++ ++.+ ..++|+ |+...... ...+....|+.
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~~~Y~~ 146 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTA----GGPVPIPAYTT 146 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----CTTSCCHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccC----CCCCCCccHHH
Confidence 99999998532 23334444444 5556 678887 54332211 11134678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .|++++.++||.+.+++....... ...............+.+++|+|++++.++.+
T Consensus 147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 220 (239)
T 2ekp_A 147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN------PELYEPITARIPMGRWARPEEIARVAAVLCGD 220 (239)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC------HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999887753 489999999999987654321100 00000000001112478899999999999865
Q ss_pred Cc--cCCceEEEcC
Q 021596 207 PR--TLNKNLYIQP 218 (310)
Q Consensus 207 ~~--~~~~~~~~~~ 218 (310)
+. ..|+.+.+.|
T Consensus 221 ~~~~~tG~~~~vdg 234 (239)
T 2ekp_A 221 EAEYLTGQAVAVDG 234 (239)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCCCCEEEECC
Confidence 32 2466676653
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.9e-18 Score=140.53 Aligned_cols=201 Identities=15% Similarity=0.078 Sum_probs=134.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. .+. +..+.+. ...+.++.+|++|.+++.++++
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG-----NALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR 82 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCH-----HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 332 2223332 2457888999999999888876
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++.+++ ++.+ ..++|+ |+..... ...+..
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~ 156 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHT-----AGFAGV 156 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTT-----BCCTTC
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCc-----CCCCCc
Confidence 7999999998541 33444555554 3444 457776 4433210 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++..++||.+........... .................+.+++|+|++++
T Consensus 157 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 232 (280)
T 3tox_A 157 APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG----AAPETRGFVEGLHALKRIARPEEIAEAAL 232 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT----CCTHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc----cCHHHHHHHhccCccCCCcCHHHHHHHHH
Confidence 7899999999887753 478999999999877643321110 00000001111112235788999999999
Q ss_pred HHhcCCc--cCCceEEEcCC
Q 021596 202 KAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~ 219 (310)
.++.++. ..|+++++.|+
T Consensus 233 ~L~s~~a~~itG~~i~vdGG 252 (280)
T 3tox_A 233 YLASDGASFVTGAALLADGG 252 (280)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCccccCCcCcEEEECCC
Confidence 9997642 24777777643
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-17 Score=136.42 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=131.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRT-----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 33332 2223322 358889999999999888876
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH-----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI-----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa-----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++.+++ ++.+ ..++|+ |+.... ...+..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 153 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAW------DAGPGV 153 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGG------SCCTTC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhc------cCCCCc
Confidence 6899999998532 44455566665 3333 467776 443221 112346
Q ss_pred hhhHHHHHHHHHHHH--------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVE--------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~--------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|...+.+.+ ..|+++..++||.+............ .... ...........+.+++|+|+++
T Consensus 154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~---~~~~--~~~~~~~p~~r~~~pedvA~~v 228 (257)
T 3imf_A 154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS---EEMA--KRTIQSVPLGRLGTPEEIAGLA 228 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----------CCS--HHHHTTSTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC---HHHH--HHHHhcCCCCCCcCHHHHHHHH
Confidence 789999999877664 34899999999988765322110000 0000 0000111123578899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.++. ..|+.+++.|.
T Consensus 229 ~~L~s~~~~~itG~~i~vdGG 249 (257)
T 3imf_A 229 YYLCSDEAAYINGTCMTMDGG 249 (257)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHcCchhcCccCCEEEECCC
Confidence 99986543 24677777643
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=137.36 Aligned_cols=185 Identities=14% Similarity=0.115 Sum_probs=117.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... ....+.+.. ..+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG----HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 47899999999999999999999999999999984321 122233332 357889999999999998887
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.++.++.++ +++.+ ..++|+ ||.... ...+....|
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y 155 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASL------RGGSGFAAF 155 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT------CCCTTCHHH
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHc------CCCCCCccH
Confidence 6799999999642 3334444444 45555 567776 443221 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCE-EEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPY-TYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~-~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
+.+|...+.+.+. .|+++ ..+.||.+...+........ ........ +..+.+++|+|++++.+
T Consensus 156 ~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~--------~~~~~~~~-~~~~~~pedvA~~~~~l 226 (252)
T 3h7a_A 156 ASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM--------FGKDALAN-PDLLMPPAAVAGAYWQL 226 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh--------hhhhhhcC-CccCCCHHHHHHHHHHH
Confidence 9999999887753 47888 78999988776543321110 00011111 12388999999999999
Q ss_pred hcCCc
Q 021596 204 VDDPR 208 (310)
Q Consensus 204 l~~~~ 208 (310)
+.++.
T Consensus 227 ~s~~~ 231 (252)
T 3h7a_A 227 YQQPK 231 (252)
T ss_dssp HHCCG
T ss_pred HhCch
Confidence 98653
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-18 Score=140.59 Aligned_cols=197 Identities=12% Similarity=0.136 Sum_probs=130.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ...+.++.+|++|.+++.++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEV---ADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999999999963211 111222232 2468899999999999888876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++ +..+++.+ ..++|+ |+.... ...+....
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~ 178 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGE------RGNMGQTN 178 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------HCCTTCHH
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhc------CCCCCchH
Confidence 7999999999643 2333334 44444555 567776 543221 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+.......+... .............+.+++|+|+++..+
T Consensus 179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--------LKADYVKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--------HHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 99999999887753 578899999998877654332111 001111111223578899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.++. ..|+.+++.|
T Consensus 251 ~s~~~~~itG~~i~vdG 267 (271)
T 4iin_A 251 LSDHSSYITGETLKVNG 267 (271)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCCcCCCcCCEEEeCC
Confidence 97542 3467777754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7.8e-18 Score=140.81 Aligned_cols=200 Identities=15% Similarity=0.186 Sum_probs=129.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHh------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAI------ 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~------ 74 (310)
.++++||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+. ...+.++.+|+.|.+++.+++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999998 32221 223332 245788999999999988877
Q ss_pred --cCCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 75 --KQVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 75 --~~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
.++|++||+||... +.++.++++++ ++.+ ..++|+ |+..... ..|..
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~ 168 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS------ALPSV 168 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS------CCTTC
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcC------CCCCc
Confidence 46899999998642 33445555555 4455 678777 5533221 12346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|...+.+.+. .++++..++||.+.+.+........ ..... ............+.+++|+|+++
T Consensus 169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 245 (273)
T 1ae1_A 169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSALI 245 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc---cCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 7899999999887753 4899999999998876533211100 00000 00000000112478899999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.++. ..|+.+++.|
T Consensus 246 ~~l~s~~~~~~tG~~i~vdG 265 (273)
T 1ae1_A 246 AFLCFPAASYITGQIIWADG 265 (273)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCccccCcCCCEEEECC
Confidence 99886532 2467777754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-18 Score=143.37 Aligned_cols=195 Identities=15% Similarity=0.171 Sum_probs=129.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999998887 32222 223332 2357889999999999988874
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+|+... +.++.+++++ +++.+ ..++|+ |+..... ..+...
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~ 191 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT------GNVGQA 191 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCTTCH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc------CCCCCc
Confidence 6899999998642 3333344444 44556 678877 5532211 122357
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .++++++++||.+.+......... .. .. .........+++++|+|++++.
T Consensus 192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~-~~---~~~~~~~~~~~~~~dvA~~~~~ 263 (285)
T 2c07_A 192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----IK-KN---IISNIPAGRMGTPEEVANLACF 263 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----HH-HH---HHTTCTTSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH----HH-HH---HHhhCCCCCCCCHHHHHHHHHH
Confidence 899999998877653 489999999999877643321100 00 00 0000111247899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.|
T Consensus 264 l~~~~~~~~~G~~i~v~g 281 (285)
T 2c07_A 264 LSSDKSGYINGRVFVIDG 281 (285)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCCCcCCCCCCEEEeCC
Confidence 987542 2466777753
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-17 Score=138.78 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=124.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+++++.|+++|++|++++|+... ......+.+.. ..+.++++|++|.+++.++++
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAE---GVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHH---HHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999975321 11222233332 458899999999998888776
Q ss_pred CCCEEEEcccch--h-------------------hhhHHHHHHHHHH----cCC--ccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 QVDVVISTVGHA--L-------------------LADQVKIIAAIKE----AGN--VTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ~~d~Vi~~a~~~--~-------------------~~~~~~~~~aa~~----~~~--v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||.. . +.++.++++++.. .+. ..++|+ ||..... ..+.
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------~~~~ 180 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM------TSPE 180 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------C
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc------CCCC
Confidence 799999999872 1 3444455555433 220 246666 5433221 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC-CCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD-GNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|...+.+.+. .++++..++||.+...+........ . ..... ......+.+++|+|++
T Consensus 181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~----~~~~~~~~p~~r~~~pedvA~~ 252 (280)
T 4da9_A 181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----D----GLIESGLVPMRRWGEPEDIGNI 252 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----H----HHHhhcCCCcCCcCCHHHHHHH
Confidence 57899999999887753 5789999999998776543321110 0 00001 1122357889999999
Q ss_pred HHHHhcCCc--cCCceEEEcCC
Q 021596 200 TIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~~ 219 (310)
++.++.+.. ..|+.+++.|.
T Consensus 253 v~~L~s~~~~~itG~~i~vdGG 274 (280)
T 4da9_A 253 VAGLAGGQFGFATGSVIQADGG 274 (280)
T ss_dssp HHHHHTSTTGGGTTCEEEESTT
T ss_pred HHHHhCccccCCCCCEEEECCC
Confidence 999987643 34777777643
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=137.99 Aligned_cols=202 Identities=16% Similarity=0.134 Sum_probs=132.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCch--h-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK--S-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
++++||||+|+||+++++.|+++|++|+++.|+. .+ . ...+.+. ...+.++.+|++|.+++.++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQ-----QEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAE 77 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGG-----GHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-----chHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999983 33 2 2223332 2457889999999999888876
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCc-cEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNV-TRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v-~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++. +.+ . .++|+ |+..... ..+.
T Consensus 78 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------~~~~ 150 (258)
T 3a28_C 78 KLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQ------GFPI 150 (258)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTS------CCTT
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhcc------CCCC
Confidence 7999999998642 333444555544 345 5 68877 5543221 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC--CCCCC-CCeEEEecCCCceeEeeccchHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG--AAAPP-RDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
...|+.+|...+.+.+. .++++..++||.+..++........ ..... ......+........+.+++|+|
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 230 (258)
T 3a28_C 151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVA 230 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHH
Confidence 67899999999887753 4899999999998776432211000 00000 00000000001112478899999
Q ss_pred HHHHHHhcCCc--cCCceEEEcC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
++++.++.++. ..|+.+.+.|
T Consensus 231 ~~v~~l~s~~~~~~tG~~i~vdG 253 (258)
T 3a28_C 231 GLVSFLASENSNYVTGQVMLVDG 253 (258)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHHHhCcccCCCCCCEEEECC
Confidence 99999986542 3466777754
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-18 Score=141.94 Aligned_cols=194 Identities=17% Similarity=0.156 Sum_probs=132.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAG---AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999985321 1112222332 2457889999999999888876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..+....
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 177 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEM------GNPGQAN 177 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHH------CCTTCHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC------CCCCchh
Confidence 7999999998753 34445555554 4445 567776 5532211 1234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||.+........... ..........+.+++|+|++++.+
T Consensus 178 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----------~~~~~~p~~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 178 YSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAE-----------KLLEVIPLGRYGEAAEVAGVVRFL 246 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHH-----------HHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHH-----------HHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999998877653 589999999999877643321110 000001112467889999999999
Q ss_pred hcCCc---cCCceEEEcC
Q 021596 204 VDDPR---TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~---~~~~~~~~~~ 218 (310)
+.++. ..|+.+++.|
T Consensus 247 ~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 247 AADPAAAYITGQVINIDG 264 (269)
T ss_dssp HHCGGGGGCCSCEEEEST
T ss_pred hCCcccCCCcCCEEEECC
Confidence 98743 2377777764
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=137.79 Aligned_cols=193 Identities=16% Similarity=0.144 Sum_probs=131.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+.. ....++.++.+|++|.+++.++++ +
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREA--AEAVGAHPVVMDVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHH--HHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH--HHHcCCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 3333211 112258899999999999888776 4
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... ..++.++.+++.. .+ ..++|+ |+.. .. ..+....|+
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~------~~~~~~~Y~ 149 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YL------GNLGQANYA 149 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GG------CCTTCHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hc------CCCCchhHH
Confidence 899999998532 3344455555543 35 677877 5544 21 123357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .|++++.++||++...+...+... . ... ... ......+.+++|+|++++.++.
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~-~~~--~~~-~~p~~~~~~~~dvA~~v~~l~s 221 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK----V-REK--AIA-ATPLGRAGKPLEVAYAALFLLS 221 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH----H-HHH--HHH-TCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHH----H-HHH--HHh-hCCCCCCcCHHHHHHHHHHHhC
Confidence 999998877653 489999999999877643221000 0 000 000 0011247889999999999987
Q ss_pred CCc--cCCceEEEcCC
Q 021596 206 DPR--TLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~--~~~~~~~~~~~ 219 (310)
++. ..|+.+.+.|.
T Consensus 222 ~~~~~~tG~~~~vdgG 237 (245)
T 1uls_A 222 DESSFITGQVLFVDGG 237 (245)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred chhcCCcCCEEEECCC
Confidence 542 24677777543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=136.31 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=120.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV-----EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999983 3322 2223322 357889999999999888776
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+||... +.++.++++++ ++.+ ..++|+ |+.... ...+..
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 176 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGK------NPVADG 176 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSS------CCCTTC
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhc------CCCCCC
Confidence 5899999999721 33444555554 4455 567777 554332 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++..++||.+...+...... ......++.++|+|+++.
T Consensus 177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~p~dvA~~v~ 240 (262)
T 3rkr_A 177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------------KKSALGAIEPDDIADVVA 240 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------CCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------------ccccccCCCHHHHHHHHH
Confidence 7899999998887653 58999999999887654322110 011235678999999999
Q ss_pred HHhcCC
Q 021596 202 KAVDDP 207 (310)
Q Consensus 202 ~~l~~~ 207 (310)
.++.++
T Consensus 241 ~l~s~~ 246 (262)
T 3rkr_A 241 LLATQA 246 (262)
T ss_dssp HHHTCC
T ss_pred HHhcCc
Confidence 999765
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-17 Score=133.53 Aligned_cols=192 Identities=17% Similarity=0.155 Sum_probs=126.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
|+++||||+|+||+++++.|+++|++|+++.|+ +.+.+.+ +.+ ...+.++.+|++|.+++.++++ +
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 74 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCN 74 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999999998 3333222 222 2468899999999999998876 6
Q ss_pred CCEEEEcccchh--------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 77 VDVVISTVGHAL--------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 77 ~d~Vi~~a~~~~--------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
+|++||+||... +.++.++.+++. +.+ ..++|+ ||.... ...+....|
T Consensus 75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~------~~~~~~~~Y 147 (248)
T 3asu_A 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGS------WPYAGGNVY 147 (248)
T ss_dssp CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------SCCTTCHHH
T ss_pred CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhc------cCCCCCchH
Confidence 899999998531 333344444443 455 578777 553322 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceec-cccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFD-GYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
+.+|...+.+.+. .++++..++||.+. ..+....... ......... ....+.+++|+|++++.+
T Consensus 148 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~----~~~~~~~~~----~~~~~~~p~dvA~~v~~l 219 (248)
T 3asu_A 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG----DDGKAEKTY----QNTVALTPEDVSEAVWWV 219 (248)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------CCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC----chHHHHHHH----hccCCCCHHHHHHHHHHH
Confidence 9999999988753 47999999999987 4432211000 000000000 012346899999999999
Q ss_pred hcCCc-cCCceEEEc
Q 021596 204 VDDPR-TLNKNLYIQ 217 (310)
Q Consensus 204 l~~~~-~~~~~~~~~ 217 (310)
+.++. ..+..+.+.
T Consensus 220 ~s~~~~~~g~~i~v~ 234 (248)
T 3asu_A 220 STLPAHVNINTLEMM 234 (248)
T ss_dssp HHSCTTCCCCEEEEC
T ss_pred hcCCccceeeEEEEc
Confidence 97653 345566665
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=141.64 Aligned_cols=194 Identities=14% Similarity=0.144 Sum_probs=130.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|++++|+... ..++.++.+|++|.+++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999999998431 2468899999999999988876 6
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++. +.+ ..++|+ ||.... ...+....|+
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y~ 147 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQAS------IITKNASAYV 147 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGT------SCCTTBHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhc------cCCCCchhHH
Confidence 999999998532 344445555554 344 568777 554322 1123467899
Q ss_pred HHHHHHHHHHHH----cC--CCEEEEecceeccccccccCCCCCCCCCC----CeEEEecCCCceeEeeccchHHHHHHH
Q 021596 133 DVKARIRRAVEA----EG--IPYTYVESYCFDGYFLPNLLQPGAAAPPR----DKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~--~~~~i~rp~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.+|...+.+.+. .+ +++..++||.+...+.......... ... .....+........+++++|+|++++.
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 226 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVG-SDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHC-SCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccc-cCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 999999887754 12 8899999999876543221100000 000 000000000111357899999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.++. ..|+.+++.|
T Consensus 227 l~s~~~~~~tG~~i~vdG 244 (264)
T 2dtx_A 227 LASREASFITGTCLYVDG 244 (264)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCCCCcEEEECC
Confidence 987542 2466777754
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=141.59 Aligned_cols=186 Identities=19% Similarity=0.184 Sum_probs=127.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc----CCcEEEEccCCCHHHHHHHhc----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN----LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~----~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
++|+||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+.. ..+.++.+|+.|.+++.++++
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999998 33322 2222322 236788999999999888876
Q ss_pred ---CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCc--cEEcc-CCCCCCccccCCCCCC
Q 021596 76 ---QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNV--TRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v--~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|+|||+|+... +.+ +.++++++++.+ + .++|+ |+...... ...+
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~----~~~~ 182 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRV----LPLS 182 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSC----CSCG
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhccc----CCCC
Confidence 7999999998532 222 667788888776 5 67777 55332210 1123
Q ss_pred cchhhHHHHHHHHHHHH---------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 127 AKSVYYDVKARIRRAVE---------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~---------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
....|+.+|...+.+.+ ..++++..++||++...+...... ....... .......+++++|+|
T Consensus 183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~dvA 254 (279)
T 1xg5_A 183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD-------KDPEKAA-ATYEQMKCLKPEDVA 254 (279)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT-------TCHHHHH-HHHC---CBCHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcc-------cChhHHh-hhcccccCCCHHHHH
Confidence 46789999999887664 247899999999987765321111 0000000 001123578999999
Q ss_pred HHHHHHhcCCc
Q 021596 198 TYTIKAVDDPR 208 (310)
Q Consensus 198 ~~~~~~l~~~~ 208 (310)
++++.++..+.
T Consensus 255 ~~i~~l~~~~~ 265 (279)
T 1xg5_A 255 EAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHSCT
T ss_pred HHHHHHhcCCc
Confidence 99999998654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-17 Score=135.75 Aligned_cols=204 Identities=17% Similarity=0.131 Sum_probs=134.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+. ...+.+.. ..+.++.+|++|.+++.++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTR-----TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 222 22233332 357889999999999888776
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+...... ...+..
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~----~~~~~~ 177 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRT----FTTPGA 177 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTB----CCSTTC
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccC----CCCCCc
Confidence 6999999998631 44455566665 5555 567777 55432211 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce--eEeeccchHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK--AVYNKEDDIATY 199 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~ 199 (310)
..|+.+|...+.+.+. .++++..++||.+...+.......... ............... ..+..++|+|++
T Consensus 178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~r~~~pedvA~~ 256 (283)
T 3v8b_A 178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-ETAIPVEWPKGQVPITDGQPGRSEDVAEL 256 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-HHSCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-hhhhhhhhhhhcCccccCCCCCHHHHHHH
Confidence 7899999999888763 478899999999877654322110000 000000000000011 246788999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.+.. ..|+.+++.|
T Consensus 257 v~fL~s~~a~~itG~~i~vdG 277 (283)
T 3v8b_A 257 IRFLVSERARHVTGSPVWIDG 277 (283)
T ss_dssp HHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHcCccccCCcCCEEEECc
Confidence 999986542 2467777753
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=141.15 Aligned_cols=198 Identities=14% Similarity=0.126 Sum_probs=132.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh-------cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~-------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.. ..+.+. ...+.++.+|++|.+++.++++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKL-----ERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 36899999999999999999999999999999983 2221 222222 3468899999999999988876
Q ss_pred -------CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCC
Q 021596 76 -------QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|+|||+||... +.++.++++++.. .+ ..++|+ |+.. . ..
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~------~~ 164 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-K------AG 164 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-T------TC
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-c------cC
Confidence 4999999998421 5556677777654 22 356776 5543 1 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc-cccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL-PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
.|....|+.+|...+.+.+. .+++++++|||.+.+... ....... ....... . .......+.+++|+
T Consensus 165 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~---~-~~~p~~~~~~~~dv 239 (303)
T 1yxm_A 165 FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGS---F-QKIPAKRIGVPEEV 239 (303)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG-GGGGTTG---G-GGSTTSSCBCTHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccc-hHHHHHH---H-hcCcccCCCCHHHH
Confidence 23457899999998877653 389999999999987631 1111000 0000000 0 00011247899999
Q ss_pred HHHHHHHhcCCc--cCCceEEEcCC
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
|++++.++.+.. ..|+.+++.++
T Consensus 240 A~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 240 SSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhCcccccCCCcEEEECCC
Confidence 999999986542 24677777643
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=141.65 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=121.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--C--CcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--L--GVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~--~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+.. . .+.++.+|++|.+++.++++
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ-----DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35899999999999999999999999999999983 3322 2222221 2 58899999999999988876
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC---------CccEEcc-CCCCCCccccCC
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG---------NVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~---------~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|+|||+||... +.++.++++++.... +-.++|+ ||.....
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~----- 157 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL----- 157 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC-----
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc-----
Confidence 5799999999532 445566666655432 1245776 5543321
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEE----ecC-CCceeEe
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVI----LGD-GNPKAVY 190 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~ 190 (310)
..+....|+.+|..++.+.+. .|++++.++||.+.+.+......... ......... ... .......
T Consensus 158 -~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (319)
T 3ioy_A 158 -AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPD-ALKGEVKPVDKTAVERLAGVHEFG 235 (319)
T ss_dssp -CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSS
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCch-hhcccccchhHHHHHHHHHhhhcC
Confidence 123457899999977665542 48999999999997765432111000 000000000 000 0111122
Q ss_pred eccchHHHHHHHHhcCC
Q 021596 191 NKEDDIATYTIKAVDDP 207 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~~ 207 (310)
++++|+|+.++.+++.+
T Consensus 236 ~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 236 MEPDVIGARVIEAMKAN 252 (319)
T ss_dssp BCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 78999999999999875
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.4e-18 Score=141.75 Aligned_cols=200 Identities=15% Similarity=0.087 Sum_probs=134.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ...+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEE---EDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGH---HHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcch---hHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999887321 1111 112222 2457889999999998887775
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHHHHcCCcc--EEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAIKEAGNVT--RFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~~v~--~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+|+... +.++.++++++...- .+ ++|+ |+.... ...+....
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~------~~~~~~~~ 198 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAY------QPSPHLLD 198 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGT------SCCTTCHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhc------cCCCCchH
Confidence 6999999998632 555667788877653 22 6776 543322 11234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .|+++..++||.+........... ...............+..++|+|++++.+
T Consensus 199 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dvA~~v~~L 272 (294)
T 3r3s_A 199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT------QDKIPQFGQQTPMKRAGQPAELAPVYVYL 272 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC------GGGSTTTTTTSTTSSCBCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 489999999999987541110000 00000011111223577899999999998
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.+.. ..|+++++.|+
T Consensus 273 ~s~~~~~itG~~i~vdGG 290 (294)
T 3r3s_A 273 ASQESSYVTAEVHGVCGG 290 (294)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCccccCCCCCEEEECCC
Confidence 86542 24677777643
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=143.16 Aligned_cols=198 Identities=20% Similarity=0.140 Sum_probs=134.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc---CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN---LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~---~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.... ....+.+.. ..+.++.+|++|.+++.++++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL----SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----HHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999984321 222233332 358899999999998887765
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ...+...
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~-----~~~~~~~ 190 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV-----TGYPGWS 190 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT-----BBCTTCH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc-----CCCCCCH
Confidence 6899999998643 44555666665 4555 577777 5433211 1123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..++||.+.+.......... ............+..++|+|++++.
T Consensus 191 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~r~~~p~dvA~~v~f 262 (293)
T 3rih_A 191 HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEY--------ISGMARSIPMGMLGSPVDIGHLAAF 262 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHH--------HHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHH--------HHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 899999999887753 5899999999999875432211000 0000000111235678999999999
Q ss_pred HhcCCc--cCCceEEEcCC
Q 021596 203 AVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~~ 219 (310)
++.+.. ..|+.+++.|+
T Consensus 263 L~s~~a~~itG~~i~vdGG 281 (293)
T 3rih_A 263 LATDEAGYITGQAIVVDGG 281 (293)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCccccCCCCCEEEECCC
Confidence 886542 24777777643
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=140.79 Aligned_cols=199 Identities=14% Similarity=0.061 Sum_probs=130.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCH-HHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNH-ESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~-~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++ |+++.|+... ...+.+... ....+.++.+|++|. +++.++++
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP---TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH---HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH---HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 478999999999999999999999997 9999998421 122111111 123578899999998 88877765
Q ss_pred --CCCEEEEcccchh-----------hhhHHHHHHHHHHcC------CccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 76 --QVDVVISTVGHAL-----------LADQVKIIAAIKEAG------NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------~~~~~~~~~aa~~~~------~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
++|+|||+||... ..++.++++++...- ...++|+ ||.... ...+....|+.+|
T Consensus 82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~~sK 155 (254)
T 1sby_A 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------NAIHQVPVYSASK 155 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------SCCTTSHHHHHHH
T ss_pred cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc------cCCCCchHHHHHH
Confidence 7999999998643 555666777765431 0245766 553322 1123457899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
...+.+.+. .+++++.++||.+.+.+........ .......... ...++.+++|+|++++.+++..
T Consensus 156 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~dvA~~i~~~~~~~- 228 (254)
T 1sby_A 156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELL----LSHPTQTSEQCGQNFVKAIEAN- 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHH----TTSCCEEHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhh--hhhHHHHHHH----hcCCCCCHHHHHHHHHHHHHcC-
Confidence 999887753 5899999999999876543211100 0000000000 0113458999999999988643
Q ss_pred cCCceEEEcC
Q 021596 209 TLNKNLYIQP 218 (310)
Q Consensus 209 ~~~~~~~~~~ 218 (310)
..|+.+++.+
T Consensus 229 ~~G~~~~v~g 238 (254)
T 1sby_A 229 KNGAIWKLDL 238 (254)
T ss_dssp CTTCEEEEET
T ss_pred CCCCEEEEeC
Confidence 3467777764
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=143.20 Aligned_cols=199 Identities=12% Similarity=0.129 Sum_probs=135.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ...+.++.+|++|.+++.++++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGD---ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999984211 111112222 2457889999999999888776
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+|+... +.++.++++++...- +..++|+ ||..... ..+....|+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~Y~ 197 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE------GNETLIDYS 197 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH------CCTTCHHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC------CCCCChhHH
Confidence 6899999998532 555677888887642 1246766 4432211 122357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+...+...... ......+........+.+++|+|++++.++.
T Consensus 198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s 270 (291)
T 3ijr_A 198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-------EKKVSQFGSNVPMQRPGQPYELAPAYVYLAS 270 (291)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-------HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-------HHHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887753 48999999999998765322111 0000111111222357789999999999986
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. ..|+.+++.|
T Consensus 271 ~~~~~itG~~i~vdG 285 (291)
T 3ijr_A 271 SDSSYVTGQMIHVNG 285 (291)
T ss_dssp GGGTTCCSCEEEESS
T ss_pred CccCCCcCCEEEECC
Confidence 542 3467777754
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=139.10 Aligned_cols=175 Identities=13% Similarity=0.135 Sum_probs=124.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+. ...+.++.+|+.|.+++.++++
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK-----HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH-----HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 2221 222332 2468899999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+||... +.++ ..+++.+++.+ ..++|+ |+..... ..+...
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------~~~~~~ 178 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV------SVPFLL 178 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC------CHHHHH
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcC------CCCCch
Confidence 6899999998532 2233 33444445566 678877 5433221 123457
Q ss_pred hhHHHHHHHHHHHHH----------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 130 VYYDVKARIRRAVEA----------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.|+.+|...+.+.+. .++++++++||.+.+.+.. .. ......+++++|+|++
T Consensus 179 ~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~-------~~~~~~~~~~~dva~~ 240 (272)
T 1yb1_A 179 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-----------NP-------STSLGPTLEPEEVVNR 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-----------CT-------HHHHCCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-----------cc-------cccccCCCCHHHHHHH
Confidence 899999999877753 2788999999988765421 00 0112357899999999
Q ss_pred HHHHhcCCc
Q 021596 200 TIKAVDDPR 208 (310)
Q Consensus 200 ~~~~l~~~~ 208 (310)
++.++.+++
T Consensus 241 i~~~~~~~~ 249 (272)
T 1yb1_A 241 LMHGILTEQ 249 (272)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 999998653
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=139.09 Aligned_cols=197 Identities=14% Similarity=0.116 Sum_probs=133.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+.... ....+.+. ...+.++.+|+.|.+++.++++
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD----EKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH----HHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999984321 11112222 3468899999999999988876
Q ss_pred -CCCEEEEcccchh---------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL---------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~---------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+|||+|+... +.+ +.++++++++.+ ..++|+ |+...... ...+..
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~----~~~~~~ 184 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIV----NIPQLQ 184 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC-------CCH
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccC----CCCCCc
Confidence 3999999998531 111 467788888777 788887 55332211 012346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .+ ++..++||++...+..... ......+........+++++|+|++++
T Consensus 185 ~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~p~~~~~~~~dvA~~~~ 255 (279)
T 3ctm_A 185 APYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS--------KDMKAKWWQLTPLGREGLTQELVGGYL 255 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC--------HHHHHHHHHHSTTCSCBCGGGTHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC--------hHHHHHHHHhCCccCCcCHHHHHHHHH
Confidence 7899999999988864 35 7889999998776432100 000000000001124789999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.++. ..|+.+++.|
T Consensus 256 ~l~s~~~~~~tG~~i~vdg 274 (279)
T 3ctm_A 256 YLASNASTFTTGSDVVIDG 274 (279)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCccccCccCCEEEECC
Confidence 9987542 3467777764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-17 Score=135.10 Aligned_cols=193 Identities=17% Similarity=0.148 Sum_probs=125.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhc-CCcEEEEccCCCHHHHHHHhcC------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKN-LGVNFVVGDVLNHESLVNAIKQ------ 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~~~~~~~~------ 76 (310)
++++||||+|+||+++++.|+++|++|+++.|+ +.+.+. .+.+.. ..+.++.+|++|.+++.++++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRR-----EERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999998 333322 222222 3688999999999999998874
Q ss_pred -CCEEEEcccchh--------------------hhh----HHHHHHHHHHcCCcc-EEcc-CCCCCCccccCCCCCCcch
Q 021596 77 -VDVVISTVGHAL--------------------LAD----QVKIIAAIKEAGNVT-RFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 -~d~Vi~~a~~~~--------------------~~~----~~~~~~aa~~~~~v~-~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
+|++||+||... +.+ ++.++..+++.+ .. ++|+ |+.... ...+...
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~------~~~~~~~ 169 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGK------WPYPGSH 169 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGT------SCCTTCH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhc------cCCCCCc
Confidence 599999998531 223 334455555656 56 8777 553322 1123457
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..++||.+...+....... .......... ...++.++|+|++++.
T Consensus 170 ~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~----~~~~~~pedvA~~v~~ 241 (272)
T 2nwq_A 170 VYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG----DQARYDKTYA----GAHPIQPEDIAETIFW 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------------CCCCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc----chHHHHHhhc----cCCCCCHHHHHHHHHH
Confidence 899999999988764 478999999999877643211000 0000000000 1124789999999999
Q ss_pred HhcCCcc-CCceEEEc
Q 021596 203 AVDDPRT-LNKNLYIQ 217 (310)
Q Consensus 203 ~l~~~~~-~~~~~~~~ 217 (310)
++.++.. .++.+.+.
T Consensus 242 l~s~~~~~~g~~i~v~ 257 (272)
T 2nwq_A 242 IMNQPAHLNINSLEIM 257 (272)
T ss_dssp HHTSCTTEEEEEEEEE
T ss_pred HhCCCccCccceEEEe
Confidence 9976532 34455554
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=138.85 Aligned_cols=194 Identities=12% Similarity=0.092 Sum_probs=122.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC----CCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ----VDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~----~d~ 79 (310)
|++|+||||+|+||+++++.|+++|++|+++.|+.... . . . +.+|++|.+++.++++. +|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----~------~---~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----I------A---D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----E------C---C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh-----c------c---c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 56899999999999999999999999999999984321 0 1 1 57899999999998864 599
Q ss_pred EEEcccchh------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCcc-c---------------------c
Q 021596 80 VISTVGHAL------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVD-R---------------------A 120 (310)
Q Consensus 80 Vi~~a~~~~------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~-~---------------------~ 120 (310)
+||+||... +.++.++++++. +.+ ..++|+ ||...... . .
T Consensus 66 lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (257)
T 1fjh_A 66 LVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE 144 (257)
T ss_dssp EEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred EEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence 999998643 445555666654 445 578877 54322200 0 0
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeecc
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 193 (310)
.....+....|+.+|...+.+.+. .++++..++||.+.+.+........ .......... .....+.++
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~ 219 (257)
T 1fjh_A 145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGESIAKFV--PPMGRRAEP 219 (257)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CC--CSTTSCCCT
T ss_pred cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch---hHHHHHHhcc--cccCCCCCH
Confidence 001123467899999999887753 5899999999998876543321100 0000000000 111247899
Q ss_pred chHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 194 DDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+|+|++++.++.++. ..|+.+++.|
T Consensus 220 ~dvA~~~~~l~~~~~~~~tG~~~~vdg 246 (257)
T 1fjh_A 220 SEMASVIAFLMSPAASYVHGAQIVIDG 246 (257)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 999999999997652 2466666653
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-18 Score=141.49 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=132.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++.+ ..+.+ ....+.++.+|++|.+++.++++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDV-----SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 3322 22222 23568999999999998887776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++.+++. +.+.-.++|. |+.... ...+..
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~ 168 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL------APLPDH 168 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCCTTC
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc------cCCCCC
Confidence 7999999998643 334445555543 3331246766 543322 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .++++..++||++........... ...............+..++|+|++++
T Consensus 169 ~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dva~~v~ 242 (266)
T 4egf_A 169 YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD------EAKSAPMIARIPLGRFAVPHEVSDAVV 242 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS------HHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC------hHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 7899999999887753 479999999999877543221110 000000001111224678999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.+.. ..|+.+++.|
T Consensus 243 ~L~s~~~~~itG~~i~vdG 261 (266)
T 4egf_A 243 WLASDAASMINGVDIPVDG 261 (266)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhcCccCcEEEECC
Confidence 9886542 2467777754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=134.96 Aligned_cols=188 Identities=19% Similarity=0.201 Sum_probs=127.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... ..+.++.+|++|++++.++++ +
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999984321 137889999999999888776 4
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... ..++.++++++ ++.+ ..++|+ |+..... ..+....|+
T Consensus 88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 160 (253)
T 2nm0_A 88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLL------GSAGQANYA 160 (253)
T ss_dssp CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCC------CHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC------CCCCcHHHH
Confidence 799999998632 33344455544 3445 678777 5543221 122357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||++...+...+.. ... ...........+++++|+|++++.++.
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~p~~~~~~p~dvA~~i~~l~s 232 (253)
T 2nm0_A 161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD-------EQR-ANIVSQVPLGRYARPEEIAATVRFLAS 232 (253)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------------CH-HHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH-------HHH-HHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887754 47899999999887654322110 000 000000111247899999999999987
Q ss_pred CCc--cCCceEEEcCC
Q 021596 206 DPR--TLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~--~~~~~~~~~~~ 219 (310)
++. ..|+.+.+.|+
T Consensus 233 ~~~~~~tG~~i~vdGG 248 (253)
T 2nm0_A 233 DDASYITGAVIPVDGG 248 (253)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred ccccCCcCcEEEECCc
Confidence 542 24677777543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=136.32 Aligned_cols=191 Identities=14% Similarity=0.160 Sum_probs=127.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC-CHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL-NHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+||||+|+||+++++.|+++|++|++++|+ ++.. +.+ ..+.++ +|+. +.+.+.+.+.++|+|||
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~---~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~ 87 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL---KRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVL 87 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHH---Hhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence 5789999999999999999999999999999998 3221 222 246667 9983 34455455558999999
Q ss_pred cccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHH
Q 021596 83 TVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 83 ~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
+||... ...++.+++.+++.+ ..++|+ |+..... ..+....|+.+|...
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~~sK~a~ 160 (249)
T 1o5i_A 88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS------PIENLYTSNSARMAL 160 (249)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCTTBHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcC------CCCCCchHHHHHHHH
Confidence 998532 122345667777777 788887 5533221 123467899999999
Q ss_pred HHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--c
Q 021596 139 RRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--T 209 (310)
Q Consensus 139 e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~ 209 (310)
+.+.+. .+++++.++||.+.+.+....... .... ..........+.+++|+|++++.++.++. .
T Consensus 161 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~---~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~ 233 (249)
T 1o5i_A 161 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKK---QVESQIPMRRMAKPEEIASVVAFLCSEKASYL 233 (249)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHH---HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh----hHHH---HHHhcCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 877653 589999999999987654321110 0000 00001111357899999999999886542 2
Q ss_pred CCceEEEcCC
Q 021596 210 LNKNLYIQPP 219 (310)
Q Consensus 210 ~~~~~~~~~~ 219 (310)
.|+.+++.|.
T Consensus 234 tG~~~~vdgG 243 (249)
T 1o5i_A 234 TGQTIVVDGG 243 (249)
T ss_dssp CSCEEEESTT
T ss_pred CCCEEEECCC
Confidence 3677777643
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.75 E-value=5e-17 Score=135.99 Aligned_cols=198 Identities=14% Similarity=0.145 Sum_probs=132.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.... ....+++.. ..+.++.+|++|.+++.++++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL----QVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG----HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999984321 122233332 368899999999999988887
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++. +.+.-.++|+ |+...... ...+....
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~----~~~~~~~~ 183 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII----NIPQQVSH 183 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----CCSSCCHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc----CCCCCcch
Confidence 7999999998643 334444555543 3331256666 44322111 11123578
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+........... ...+........+..++|+|++++.+
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~~~~~~~p~~r~~~pedvA~~v~fL 254 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY---------HALWEPKIPLGRMGRPEELTGLYLYL 254 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG---------HHHHGGGSTTSSCBCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH---------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 578999999999887654322110 00000011112477899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. ..|+.+++.|
T Consensus 255 ~s~~~~~itG~~i~vdG 271 (276)
T 3r1i_A 255 ASAASSYMTGSDIVIDG 271 (276)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred cCccccCccCcEEEECc
Confidence 87542 2467777754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-17 Score=135.59 Aligned_cols=197 Identities=16% Similarity=0.168 Sum_probs=133.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAE---RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999776321 1112223333 2457889999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEEcc-CC-CCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRFFP-SE-FGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~v~-s~-~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+||... +.++.++++++... .+..++|. |+ .+.. ...+....|+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~------~~~~~~~~Y~ 181 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL------VPWPGISLYS 181 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC------CCSTTCHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc------CCCCCchHHH
Confidence 7999999998643 45566777777654 11346665 44 3321 1123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .|+++..++||.+.......... ... ..........+..++|+|++++.++.
T Consensus 182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-------~~~--~~~~~~~~~r~~~pedvA~~v~fL~s 252 (271)
T 3v2g_A 182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-------HAE--AQRERIATGSYGEPQDIAGLVAWLAG 252 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-------SHH--HHHHTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-------hHH--HHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 999999887753 48999999999987764332110 000 00000111246789999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. ..|+.+++.|
T Consensus 253 ~~~~~itG~~i~vdG 267 (271)
T 3v2g_A 253 PQGKFVTGASLTIDG 267 (271)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred cccCCccCCEEEeCc
Confidence 432 3467777754
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=135.27 Aligned_cols=200 Identities=12% Similarity=0.084 Sum_probs=128.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAE---GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCH---HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999998665321 1122223333 2458899999999999988876
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcCCcc--EEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAGNVT--RFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~~v~--~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.++.++.+++...- .+ ++|+ ||..... ...+....|
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~-----~~~~~~~~Y 158 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRD-----GGGPGALAY 158 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHH-----CCSTTCHHH
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhcc-----CCCCCcHHH
Confidence 6899999998541 555667777777653 22 5665 4422110 112346789
Q ss_pred HHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 132 YDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 132 ~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
+.+|...+.+.+. ..+++..+.||.+...+...+... ..............+.+++|+|++++.++.
T Consensus 159 ~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~pedva~~v~~L~s 231 (259)
T 3edm_A 159 ATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKP-------EVRERVAGATSLKREGSSEDVAGLVAFLAS 231 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------CCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccCh-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999887753 237888899998877654332211 000111111222357789999999999886
Q ss_pred CCc--cCCceEEEcCC
Q 021596 206 DPR--TLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~--~~~~~~~~~~~ 219 (310)
+.. ..|+.+++.|.
T Consensus 232 ~~~~~itG~~i~vdGg 247 (259)
T 3edm_A 232 DDAAYVTGACYDINGG 247 (259)
T ss_dssp GGGTTCCSCEEEESBC
T ss_pred ccccCccCCEEEECCC
Confidence 542 24777777643
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=141.36 Aligned_cols=206 Identities=16% Similarity=0.106 Sum_probs=135.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +++.+.+.......+.++.+|++|.+++.++++ +
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3789999999999999999999999999999998 333322222224568999999999998887765 6
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+|++||+||... ..++.++.+++...- +-.++|+ ||.... ...|....|+.+|
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~asK 156 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE------GGHPGMSVYSASK 156 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS------SBCTTBHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc------CCCCCchHHHHHH
Confidence 899999998643 455566777776531 0235666 543322 1123467899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
...+.+.+. .|+++..++||.+............ ..... ............+.+++|+|++++.++.+.
T Consensus 157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 233 (255)
T 4eso_A 157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE---AERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEA 233 (255)
T ss_dssp HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCH---HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCCh---hhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcC
Confidence 999887753 4899999999998775432110000 00000 000000011124678999999999988753
Q ss_pred c-cCCceEEEcCCCCccC
Q 021596 208 R-TLNKNLYIQPPGNIYS 224 (310)
Q Consensus 208 ~-~~~~~~~~~~~~~~~s 224 (310)
. ..|+.+++.| +...+
T Consensus 234 ~~itG~~i~vdG-G~~~~ 250 (255)
T 4eso_A 234 TFTTGAKLAVDG-GLGQK 250 (255)
T ss_dssp TTCCSCEEEEST-TTTTT
T ss_pred cCccCCEEEECC-Ccccc
Confidence 2 2467777764 33444
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=6.5e-18 Score=140.37 Aligned_cols=199 Identities=13% Similarity=0.104 Sum_probs=132.3
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+ |+||+++++.|+++|++|+++.|+. ......+.+.. ..+.++.+|++|.+++.++++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG-----GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 3689999999 9999999999999999999999983 21112233322 347899999999999988876
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+|+... +.++.++++++...- +-.++|+ |+..... ..+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~~~ 156 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------VVPK 156 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS------BCTT
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC------CCCC
Confidence 6899999998521 445667777776541 0136766 5433221 1233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||.+.+......... ...............+.+++|+|+++
T Consensus 157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~v 230 (261)
T 2wyu_A 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF------TKMYDRVAQTAPLRRNITQEEVGNLG 230 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 57899999999887753 389999999999877643221100 00000000000112467899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.+.. ..|+.+++.+.
T Consensus 231 ~~l~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 231 LFLLSPLASGITGEVVYVDAG 251 (261)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHcChhhcCCCCCEEEECCC
Confidence 99986532 24677777643
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=139.16 Aligned_cols=196 Identities=13% Similarity=0.223 Sum_probs=129.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARD-----AEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999999999999998 32222 2223322 257888999999999888776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCc----cEEcc-CCCCCCccccCCCCCCc
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNV----TRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v----~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++ +..+++.+ . .++|+ |+..... + .+.
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~-----~-~~~ 177 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGIS-----A-MGE 177 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTC-----C-CCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcC-----C-CCC
Confidence 6999999998532 3333333 44444444 3 67877 5533221 1 122
Q ss_pred ch-hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 128 KS-VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~-~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.. .|+.+|...+.+.+. .++++..++||.+...+....... . ..... .........+.+++|+|++
T Consensus 178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~-~~~~~-~~~~~p~~r~~~p~dvA~~ 251 (276)
T 2b4q_A 178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----P-QALEA-DSASIPMGRWGRPEEMAAL 251 (276)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----H-HHHHH-HHHTSTTSSCCCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----H-HHHHH-hhcCCCCCCcCCHHHHHHH
Confidence 34 899999999887753 489999999999887653321100 0 00000 0000011247889999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.++. ..|+.+.+.|
T Consensus 252 v~~l~s~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 252 AISLAGTAGAYMTGNVIPIDG 272 (276)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCccccCCCCCEEEeCC
Confidence 999987542 2467777754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-18 Score=138.68 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=132.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +++.+.........+.++.+|++|.+++.++++ +
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDIN-----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 4789999999999999999999999999999998 333322221124568899999999999988876 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++.++ +++.+...++|+ |+.... ...|....|+
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~ 154 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF------AGTPNMAAYV 154 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH------HTCTTCHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc------cCCCCchhhH
Confidence 999999999643 3344445554 555442467776 443221 1123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+........... ..............+..++|+|+++..++.
T Consensus 155 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~pedva~~v~~L~s 227 (247)
T 3rwb_A 155 AAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-------EAFGFVEMLQAMKGKGQPEHIADVVSFLAS 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-------GGHHHHHHHSSSCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-------HHHHHHhcccccCCCcCHHHHHHHHHHHhC
Confidence 999998877753 589999999999876543221110 000000000111245778999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. ..|+.+++.|
T Consensus 228 ~~~~~itG~~i~vdG 242 (247)
T 3rwb_A 228 DDARWITGQTLNVDA 242 (247)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCCCCEEEECC
Confidence 542 2467777754
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-17 Score=134.91 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=130.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhh---hcCCcEEEEccC--CCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHF---KNLGVNFVVGDV--LNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l---~~~~~~~v~~D~--~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++.. ..+.+ ....+.++.+|+ .|.+++.++++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNE-----EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 3322 12222 123688999999 89988887776
Q ss_pred -----CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 -----QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------~~~ 159 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGR------QGR 159 (252)
T ss_dssp HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGT------SCC
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhc------cCC
Confidence 6999999998631 44455566665 4455 567776 543322 112
Q ss_pred CcchhhHHHHHHHHHHHHH----c--CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA----E--GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~----~--~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
+....|+.+|...+.+.+. . .+++..+.||++...+....... .....+..++|+|.+
T Consensus 160 ~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~----------------~~~~~~~~p~dva~~ 223 (252)
T 3f1l_A 160 ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPT----------------EDPQKLKTPADIMPL 223 (252)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTT----------------CCGGGSBCTGGGHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCc----------------cchhccCCHHHHHHH
Confidence 3467899999999887753 2 37788889998876543322111 011236788999999
Q ss_pred HHHHhcCCc--cCCceEEEcCCCCccCHH
Q 021596 200 TIKAVDDPR--TLNKNLYIQPPGNIYSFN 226 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~~~~~~s~~ 226 (310)
++.++.+.. ..|+.+++.| +...++.
T Consensus 224 ~~~L~s~~~~~itG~~i~vdg-G~~~~~~ 251 (252)
T 3f1l_A 224 YLWLMGDDSRRKTGMTFDAQP-GRKPGIS 251 (252)
T ss_dssp HHHHHSGGGTTCCSCEEESSC-C------
T ss_pred HHHHcCccccCCCCCEEEeCC-CcCCCCC
Confidence 999986542 2466676654 4344443
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-18 Score=139.93 Aligned_cols=198 Identities=17% Similarity=0.168 Sum_probs=133.1
Q ss_pred CCCceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.+|++++||||+|+||+++++.|++ .|+.|+++.|+.... ...+.++.+|++|.+++.++++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 69 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKNV 69 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHhC
Confidence 3478999999999999999999999 788999999884321 2356899999999999998887
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCc--cEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNV--TRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v--~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++||+||... +.++.++++++...- . .++|+ |+.... ...|....|+.
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~------~~~~~~~~Y~a 142 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCF------IAKPNSFAYTL 142 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGT------CCCTTBHHHHH
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHc------cCCCCCchhHH
Confidence 6899999999742 455667777776542 1 25665 443322 12234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC--CCC-CCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA--APP-RDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
+|...+.+.+. .|+++..++||.+...+.......... ... ...............+.+++|+|++++.+
T Consensus 143 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 143 SKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 99999888753 589999999999977643221100000 000 00000001111223578899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.++. ..|+.+++.|
T Consensus 223 ~s~~~~~itG~~i~vdG 239 (244)
T 4e4y_A 223 LSDKSKFMTGGLIPIDG 239 (244)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hcCccccccCCeEeECC
Confidence 97543 2467777754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=138.33 Aligned_cols=195 Identities=19% Similarity=0.160 Sum_probs=131.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... .....+.+|+.|.+++.++++ +
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 94 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGLGR 94 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence 36899999999999999999999999999999984432 112345789999988877665 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++ ++.+ ..++|+ ||.... ...+....|+
T Consensus 95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~------~~~~~~~~Y~ 167 (266)
T 3uxy_A 95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGL------RPGPGHALYC 167 (266)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTT------BCCTTBHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhC------CCCCCChHHH
Confidence 999999999643 44455666665 5555 577777 543322 1123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .|+++..++||.+.+............ .................+.+++|+|++++.++.
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s 246 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGF-DPDRAVAELGRTVPLGRIAEPEDIADVVLFLAS 246 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTC-CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887753 479999999999987643221110000 000000011111222357889999999999997
Q ss_pred CCc--cCCceEEEcCC
Q 021596 206 DPR--TLNKNLYIQPP 219 (310)
Q Consensus 206 ~~~--~~~~~~~~~~~ 219 (310)
++. ..|+.+++.|+
T Consensus 247 ~~~~~itG~~i~vdGG 262 (266)
T 3uxy_A 247 DAARYLCGSLVEVNGG 262 (266)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred chhcCCcCCEEEECcC
Confidence 643 24777777643
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=138.32 Aligned_cols=194 Identities=14% Similarity=0.216 Sum_probs=132.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------CC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------QV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------~~ 77 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++ ..+.+ ...+.++.+|++|.+++.++++ ++
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~--~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~i 80 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG-----ED--VVADL-GDRARFAAADVTDEAAVASALDLAETMGTL 80 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC-----HH--HHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch-----HH--HHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999962 21 11222 4568999999999999988886 79
Q ss_pred CEEEEcccchh-----------------------hhhHHHHHHHHHHc-----------CCccEEcc-CCCCCCccccCC
Q 021596 78 DVVISTVGHAL-----------------------LADQVKIIAAIKEA-----------GNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 78 d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-----------~~v~~~v~-s~~~~~~~~~~~ 122 (310)
|++||+||... +.++.++++++... ..-.++|+ ||.....
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----- 155 (257)
T 3tl3_A 81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD----- 155 (257)
T ss_dssp EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C-----
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC-----
Confidence 99999998531 34445566666542 11346766 4433221
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccc
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKED 194 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~ 194 (310)
..+....|+.+|...+.+.+. .++++..++||.+...+...+... ........... ..+.+++
T Consensus 156 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~r~~~p~ 226 (257)
T 3tl3_A 156 -GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE--------ARASLGKQVPHPSRLGNPD 226 (257)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH--------HHHHHHHTSSSSCSCBCHH
T ss_pred -CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH--------HHHHHHhcCCCCCCccCHH
Confidence 122457899999998877653 478999999999877644321110 00000000111 3578899
Q ss_pred hHHHHHHHHhcCCccCCceEEEcCC
Q 021596 195 DIATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 195 D~a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
|+|++++.+++++...|+.+++.|.
T Consensus 227 dva~~v~~l~s~~~itG~~i~vdGG 251 (257)
T 3tl3_A 227 EYGALAVHIIENPMLNGEVIRLDGA 251 (257)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHHhcCCCCCCCEEEECCC
Confidence 9999999999876556788887643
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-18 Score=141.22 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=133.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++. ...+++.. ..+.++.+|++|.+++.++++
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP-----SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH-----HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 222 22233332 458889999999999988887
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... +.++.++.+++ ++.+ ..++|+ |+..... ..+...
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~------~~~~~~ 173 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSEL------ARATVA 173 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------BCTTCH
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCC------CCCCch
Confidence 6999999999642 33444554444 4445 567776 5533221 123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..++||.+...+....... ...............+..++|+|++++.
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~v~~ 247 (271)
T 4ibo_A 174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN------PEFDAWVKARTPAKRWGKPQELVGTAVF 247 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC------HHHHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999999887753 579999999999887643322110 0000000000112346789999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. ..|+.+++.|
T Consensus 248 L~s~~~~~itG~~i~vdG 265 (271)
T 4ibo_A 248 LSASASDYVNGQIIYVDG 265 (271)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCccccCCCCcEEEECC
Confidence 886542 2467777754
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-17 Score=135.27 Aligned_cols=178 Identities=12% Similarity=0.052 Sum_probs=129.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++|+||||+|+||+++++.|+++|++|++++|+.... ....+.+|+.|.+++.++++ ++
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~i 88 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSIKV 88 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999995432 22457889999999888876 46
Q ss_pred CEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 78 DVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 78 d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
|+|||+||... +.++.++++++...- +-.++|+ |+.... ...+....|+.+|
T Consensus 89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~~sK 162 (251)
T 3orf_A 89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL------NRTSGMIAYGATK 162 (251)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------SCCTTBHHHHHHH
T ss_pred CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc------cCCCCCchhHHHH
Confidence 99999998521 455667778777642 0135666 543322 1123467899999
Q ss_pred HHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 136 ARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 136 ~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
...+.+.+. .++++..++||++...+....... .....+++++|+|++++.++.+
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~----------------~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD----------------ANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT----------------SCGGGSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc----------------ccccccCCHHHHHHHHHHHhcC
Confidence 999988863 367889999998877644322111 1123578899999999999987
Q ss_pred ---CccCCceEEEcC
Q 021596 207 ---PRTLNKNLYIQP 218 (310)
Q Consensus 207 ---~~~~~~~~~~~~ 218 (310)
....|+.+++.+
T Consensus 227 ~~~~~~tG~~i~v~~ 241 (251)
T 3orf_A 227 SDSRPTNGSLVKFET 241 (251)
T ss_dssp GGGCCCTTCEEEEEE
T ss_pred ccccCCcceEEEEec
Confidence 233577777753
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.74 E-value=6e-18 Score=141.12 Aligned_cols=196 Identities=13% Similarity=0.137 Sum_probs=130.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... ...+..+.+|++|.+++.++++ +
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999984322 2357789999999999988876 7
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..+....|+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 154 (269)
T 3vtz_A 82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYA------ATKNAAAYV 154 (269)
T ss_dssp CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------BCTTCHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc------CCCCChhHH
Confidence 999999998643 33344455544 4455 567776 4432221 123467899
Q ss_pred HHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCC---CCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPP---RDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|...+.+.+. .++++..++||.+...+............. ......+........+.+++|+|++++.+
T Consensus 155 asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 234 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFL 234 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999888763 268889999999877543211100000000 00000001111123577899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. ..|+.+++.|
T Consensus 235 ~s~~~~~itG~~i~vdG 251 (269)
T 3vtz_A 235 ASDRSSFITGACLTVDG 251 (269)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCccCCCcCcEEEECC
Confidence 86542 3467777764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=138.59 Aligned_cols=197 Identities=16% Similarity=0.201 Sum_probs=132.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+... ........+. ...+.++.+|++|.+++.++++
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSP---RRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCS---SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 5799999999999999999999999999998854332 1222233332 2458899999999999888876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHH----HHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVK----IIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~----~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.+ ++..+++.+ ..++|+ |+..... ..+....
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 162 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK------GQFGQTN 162 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG------SCSCCHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc------CCCCCcc
Confidence 6899999998643 333333 444445666 577777 5543221 1234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+........... .............+.+++|+|++++.+
T Consensus 163 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l 234 (256)
T 3ezl_A 163 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD--------VLEKIVATIPVRRLGSPDEIGSIVAWL 234 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999998877653 478999999999877643321100 000000001112467899999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. ..|+.+++.|
T Consensus 235 ~s~~~~~~tG~~i~vdg 251 (256)
T 3ezl_A 235 ASEESGFSTGADFSLNG 251 (256)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCcccCCcCcEEEECC
Confidence 86432 3467777754
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-17 Score=138.44 Aligned_cols=219 Identities=15% Similarity=0.174 Sum_probs=140.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--C---CcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--L---GVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~---~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+.. . .+.++.+|++|.+++.++++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 3689999999999999999999999999999998 33322 2223322 2 57889999999999888876
Q ss_pred -----CCCEEEEcccchh---------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCC
Q 021596 76 -----QVDVVISTVGHAL---------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~---------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|++||+||... +.++.++++++.. .+ .++|+ |+..... +.
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~-----~~ 173 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGP-----QA 173 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSS-----SC
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhcc-----CC
Confidence 7999999998531 2334455555543 33 57776 5533221 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCC-CCeEEEecCCCceeEeeccchH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPP-RDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
.+....|+.+|...+.+.+. .|+++..++||.+...+............. ...............+.+++|+
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 253 (297)
T 1xhl_A 174 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 253 (297)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHH
Confidence 13467899999999887753 589999999999987653321000000000 0000000000111247889999
Q ss_pred HHHHHHHhcCC---ccCCceEEEcCCCCccCHHHHHHHHHHH
Q 021596 197 ATYTIKAVDDP---RTLNKNLYIQPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 197 a~~~~~~l~~~---~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 235 (310)
|++++.++.++ ...|+.+.+.| +..+...+.+..+.++
T Consensus 254 A~~v~~l~s~~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 254 ANIIVFLADRNLSSYIIGQSIVADG-GSTLVMGMQTHDLMSV 294 (297)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEEST-TGGGCCGGGGSCHHHH
T ss_pred HHHHHHHhCCcccCCccCcEEEECC-Cccccccccccchhhh
Confidence 99999998654 23467777764 4466666655555544
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=137.63 Aligned_cols=199 Identities=13% Similarity=0.069 Sum_probs=128.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.++... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAA---AAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999988665321 1112222332 2457889999999999988876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++||+||... +.++.++++++...- .-.++|+ |+.... ...|....|+.
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~a 177 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVG------LLHPSYGIYAA 177 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHH------HCCTTCHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhc------cCCCCchHHHH
Confidence 6899999998643 445566777766541 0236666 443221 11234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .|+++..+.||.+...+...... ......+........+..++|+|++++.++.+
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 250 (267)
T 3u5t_A 178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKS-------DEVRDRFAKLAPLERLGTPQDIAGAVAFLAGP 250 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCC-------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999888764 47899999999887654322110 00000111111223577899999999999865
Q ss_pred Cc--cCCceEEEcC
Q 021596 207 PR--TLNKNLYIQP 218 (310)
Q Consensus 207 ~~--~~~~~~~~~~ 218 (310)
.. ..|+.+++.|
T Consensus 251 ~~~~itG~~i~vdG 264 (267)
T 3u5t_A 251 DGAWVNGQVLRANG 264 (267)
T ss_dssp TTTTCCSEEEEESS
T ss_pred cccCccCCEEEeCC
Confidence 42 2466666643
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=139.11 Aligned_cols=197 Identities=13% Similarity=0.137 Sum_probs=132.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------~~d 78 (310)
++++||||+|+||+++++.|+++|++|++++|+ .++.+.+.......+.++.+|++|.+++.++++ ++|
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id 105 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLA-----AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR 105 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999999999999998 333322222224568999999999999998876 589
Q ss_pred EEEEc-ccchh------------------------hhhHHHHHHHHHHc---------CCccEEcc-CCCCCCccccCCC
Q 021596 79 VVIST-VGHAL------------------------LADQVKIIAAIKEA---------GNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 79 ~Vi~~-a~~~~------------------------~~~~~~~~~aa~~~---------~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
++||+ ++... ..++.++++++... +.-.++|+ |+.... .
T Consensus 106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~ 179 (281)
T 3ppi_A 106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY------E 179 (281)
T ss_dssp EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT------S
T ss_pred eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc------C
Confidence 99999 43211 33445555555421 11346666 443322 1
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..+....|+.+|...+.+.+. .++++..++||.+...+...+.... .............+.+++|+
T Consensus 180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~~~~~~~~pedv 252 (281)
T 3ppi_A 180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA-------LAKFAANIPFPKRLGTPDEF 252 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH-------HHHHHHTCCSSSSCBCHHHH
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH-------HHHHHhcCCCCCCCCCHHHH
Confidence 123467899999998877653 4789999999998775433211100 00000000011357889999
Q ss_pred HHHHHHHhcCCccCCceEEEcCC
Q 021596 197 ATYTIKAVDDPRTLNKNLYIQPP 219 (310)
Q Consensus 197 a~~~~~~l~~~~~~~~~~~~~~~ 219 (310)
|++++.++.++...|+.+++.|+
T Consensus 253 A~~v~~l~s~~~~tG~~i~vdGG 275 (281)
T 3ppi_A 253 ADAAAFLLTNGYINGEVMRLDGA 275 (281)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTT
T ss_pred HHHHHHHHcCCCcCCcEEEECCC
Confidence 99999999876556777777654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=134.27 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=133.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC--------CCchhh-HhHhhh--cCCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS--------APSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~ 72 (310)
.++++||||+|+||+++++.|+++|++|++++|+.+.. +.++.+ ..+.+. ...+.++.+|++|.+++.+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 36899999999999999999999999999999853211 011221 122222 2457889999999999988
Q ss_pred Hhc-------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccC
Q 021596 73 AIK-------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 73 ~~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~ 121 (310)
+++ ++|++||+||... +.++.++++++ ++.+...++|+ ||....
T Consensus 95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----- 169 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL----- 169 (280)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT-----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc-----
Confidence 876 7999999998643 34445555555 34332356766 543322
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc------CCCCCCCCCCCeEEEecCCCcee
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL------LQPGAAAPPRDKVVILGDGNPKA 188 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 188 (310)
...+....|+.+|...+.+.+. .|+++..++||.+........ .... .......... ..+.
T Consensus 170 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~ 243 (280)
T 3pgx_A 170 -KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHP---SFVHSFPPMP--VQPN 243 (280)
T ss_dssp -SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCG---GGGGGSCCBT--TBCS
T ss_pred -cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCc---hhhhhhhhcc--cCCC
Confidence 1223467899999999887753 589999999999987643220 0000 0000000111 1112
Q ss_pred EeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 189 VYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.+.+++|+|++++.++.+.. ..|+.+++.|
T Consensus 244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 275 (280)
T 3pgx_A 244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDK 275 (280)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 48899999999999986543 2467777754
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=132.66 Aligned_cols=173 Identities=12% Similarity=0.108 Sum_probs=122.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
+++|+||||+|+||+++++.|+++| ++|+++.|+.... +.+..+. ...+.++.+|++|.+++.++++
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~-----~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-----KELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC-----HHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh-----HHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 5799999999999999999999999 9999999985432 1223332 3468999999999999888877
Q ss_pred ------CCCEEEEcccchh--------------------hhhHHHHHHHHHHc----------CC----ccEEcc-CCCC
Q 021596 76 ------QVDVVISTVGHAL--------------------LADQVKIIAAIKEA----------GN----VTRFFP-SEFG 114 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~----------~~----v~~~v~-s~~~ 114 (310)
++|+|||+|+... +.++.++++++... +. ..++|+ |+..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 6999999998531 34455566665432 10 246666 5432
Q ss_pred CCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce
Q 021596 115 NDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK 187 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (310)
..... +..++...|+.+|...+.+.+. .++++++++||.+...+...
T Consensus 176 ~~~~~---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------- 229 (267)
T 1sny_A 176 GSIQG---NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------------- 229 (267)
T ss_dssp GCSTT---CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred ccccC---CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence 22111 1112356799999999887753 48999999999886543210
Q ss_pred eEeeccchHHHHHHHHhcCC
Q 021596 188 AVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~ 207 (310)
..+.+++|+|+.++.++...
T Consensus 230 ~~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 230 SAPLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp TCSBCHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 02467899999999998643
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=138.25 Aligned_cols=198 Identities=12% Similarity=0.092 Sum_probs=132.2
Q ss_pred CceEEEEccCcc--hhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh----hcCCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGY--IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----KNLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+ ||+++++.|+++|++|+++.|+.. ..+.+..+ ....+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER-----LEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-----GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH-----HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 478999999988 999999999999999999999832 22222222 22368999999999999888776
Q ss_pred -----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCC
Q 021596 76 -----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+|+... ..++.++++++...- +-.++|+ |+.... ...
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~------~~~ 155 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE------LVM 155 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT------SCC
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc------ccC
Confidence 6899999998531 344556777776542 0236665 443322 112
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|...+.+.+. .|+++..++||.+........... ...............+.+++|+|+
T Consensus 156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~p~dva~ 229 (266)
T 3oig_A 156 PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF------NSILKDIEERAPLRRTTTPEEVGD 229 (266)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH------HHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch------HHHHHHHHhcCCCCCCCCHHHHHH
Confidence 3467899999999887753 478999999998877543321110 000000000011124678999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.++. ..|+.+++.|
T Consensus 230 ~v~~l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 230 TAAFLFSDMSRGITGENLHVDS 251 (266)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHcCCchhcCcCCEEEECC
Confidence 9999997542 3467777754
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=134.73 Aligned_cols=182 Identities=10% Similarity=-0.008 Sum_probs=127.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------- 75 (310)
+++|+||||+|+||+++++.|+++|++|++++|+.... .....++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc------------cCCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999985322 1135677899999999888775
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+||... +.++.++++++...- +-.++|+ ||.... ...+....|+
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~ 148 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL------DGTPGMIGYG 148 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------SCCTTBHHHH
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHc------cCCCCchHHH
Confidence 6899999998521 335566777776541 0136666 553322 1123467899
Q ss_pred HHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|...+.+.+. .++++..++||++...+...... .. ....+++++|+|++++.+
T Consensus 149 asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~---------~~~~~~~~~~vA~~v~~l 212 (241)
T 1dhr_A 149 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-------EA---------DFSSWTPLEFLVETFHDW 212 (241)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-------TS---------CGGGSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc-------ch---------hhccCCCHHHHHHHHHHH
Confidence 999999988763 35889999999887654332111 00 011346679999999999
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.... ..|+.+.+.+.
T Consensus 213 ~~~~~~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 213 ITGNKRPNSGSLIQVVTT 230 (241)
T ss_dssp HTTTTCCCTTCEEEEEEE
T ss_pred hcCCCcCccceEEEEeCC
Confidence 86542 24666666543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.9e-18 Score=140.66 Aligned_cols=204 Identities=13% Similarity=0.070 Sum_probs=133.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++. +..+++. ...+..+.+|+.|.+++.++++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRRE-----ENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 36899999999999999999999999999999983 222 2223332 2346788999999999988887
Q ss_pred CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.+ ++.++..+++.+ ..++|+ ||.... ...+....|
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~~Y 157 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAI------MPSQEMAHY 157 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGT------SCCTTCHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhc------cCCCcchHH
Confidence 7999999998643 233 334455555555 677777 543322 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC--CCCCe----E-EEecCCCceeEeeccchHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA--PPRDK----V-VILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~--~~~~~----~-~~~~~~~~~~~~i~~~D~a 197 (310)
+.+|...+.+.+. .++++..++||.+.......+....... ..... . ...........+.+++|+|
T Consensus 158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 237 (267)
T 3t4x_A 158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA 237 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHH
Confidence 9999999888764 3688889999988765332211100000 00000 0 0000001124688999999
Q ss_pred HHHHHHhcCCc--cCCceEEEcCC
Q 021596 198 TYTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 198 ~~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
++++.++.+.. ..|+.+++.|+
T Consensus 238 ~~v~fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 238 HLVTFLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHcCccccCccCCeEEECCC
Confidence 99999886532 24777777643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=136.38 Aligned_cols=195 Identities=13% Similarity=0.088 Sum_probs=132.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +++.+.. +.+ ...+.++.+|++|.+++.++++
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 3333211 222 2468889999999999888776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
++|++||+||... +.++.++++++...- +..++|+ ||.... . .+....|+.+
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~------~~~~~~Y~as 152 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-G------AFGLAHYAAG 152 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-C------HHHHHHHHHC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-C------CCCcHHHHHH
Confidence 5799999998642 445566777776541 0246766 443322 1 1235789999
Q ss_pred HHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|...+.+.+. .|+++..++||.+.+.+...+.. ..............+.+++|+|++++.++.++
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 224 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP--------WAWEQEVGASPLGRAGRPEEVAQAALFLLSEE 224 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH--------HHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9988777653 48999999999998765432100 00000000011124788999999999998754
Q ss_pred c--cCCceEEEcCC
Q 021596 208 R--TLNKNLYIQPP 219 (310)
Q Consensus 208 ~--~~~~~~~~~~~ 219 (310)
. ..|+.+++.|.
T Consensus 225 ~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 225 SAYITGQALYVDGG 238 (263)
T ss_dssp GTTCCSCEEEESTT
T ss_pred ccCCcCCEEEECCC
Confidence 2 34677777643
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-17 Score=136.97 Aligned_cols=178 Identities=14% Similarity=0.091 Sum_probs=126.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCCCCCchh-hHhHhhh--cCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|..+++|+||||+|+||+++++.|++ +|++|+++.|+. .+. ...+.+. ...+.++.+|++|.+++.++++
T Consensus 1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV-----TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH-----HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCCh-----HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 44578999999999999999999999 999999999983 222 1223332 2458899999999999988887
Q ss_pred ------CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCcc----------
Q 021596 76 ------QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVD---------- 118 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~---------- 118 (310)
++|+|||+|+... +.++.++++++...- +..++|+ |+......
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~ 155 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ 155 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred HHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHh
Confidence 7999999998541 455677888887652 0236776 54211100
Q ss_pred --------c------------------cCCCCCCcchhhHHHHHHHHHHHHH-----------cCCCEEEEecceecccc
Q 021596 119 --------R------------------AHGAVEPAKSVYYDVKARIRRAVEA-----------EGIPYTYVESYCFDGYF 161 (310)
Q Consensus 119 --------~------------------~~~~~~~~~~~y~~~K~~~e~~l~~-----------~~~~~~i~rp~~~~~~~ 161 (310)
+ ...+..| ...|+.+|...+.+.+. .++++..++||++....
T Consensus 156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~ 234 (276)
T 1wma_A 156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234 (276)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred hccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence 0 0001112 37899999998877642 47999999999886643
Q ss_pred ccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 162 LPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
... ..+.+++|+|+.++.++..+
T Consensus 235 ~~~-----------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 235 AGP-----------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp TCT-----------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred CCc-----------------------cccCChhHhhhhHhhhhcCc
Confidence 210 13678999999999999755
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=134.55 Aligned_cols=182 Identities=14% Similarity=0.068 Sum_probs=126.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+.... .....++.+|++|.+++.++++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc------------ccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999985432 1135677899999998887775
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|+|||+||... +.++.++++++...- +-.++|+ ||.... ...+....|+
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------~~~~~~~~Y~ 144 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM------GPTPSMIGYG 144 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------SCCTTBHHHH
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc------cCCCCcHHHH
Confidence 6899999998421 344556677776541 0236666 553322 1123467899
Q ss_pred HHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|...+.+.+. .++++..++||++.+.+....... . ....+++++|+|++++..
T Consensus 145 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~----------~~~~~~~~~dvA~~i~~~ 208 (236)
T 1ooe_A 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN------A----------DHSSWTPLSFISEHLLKW 208 (236)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT------C----------CGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC------c----------cccccCCHHHHHHHHHHH
Confidence 999999888753 248899999998877643322110 0 012356789999999977
Q ss_pred hcCCc---cCCceEEEcCC
Q 021596 204 VDDPR---TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~---~~~~~~~~~~~ 219 (310)
+..+. ..|+.+.+.+.
T Consensus 209 l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 209 TTETSSRPSSGALLKITTE 227 (236)
T ss_dssp HHCGGGCCCTTCEEEEEEE
T ss_pred HcCCCcccccccEEEEecC
Confidence 74432 23677776543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=138.00 Aligned_cols=197 Identities=13% Similarity=0.051 Sum_probs=130.8
Q ss_pred ceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++|+||||+ |+||+++++.|+++|++|+++.|+. .....++.+.. .++.++.+|++|.+++.++++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-----KLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 689999999 9999999999999999999999983 21122233321 347889999999999888876
Q ss_pred --CCCEEEEcccch----------h-------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHA----------L-------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~----------~-------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||.. . +.++.++++++...- +-.++|+ |+.+... ..+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------~~~~ 170 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK------VVPH 170 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS------BCTT
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc------CCCC
Confidence 689999999853 1 445667777776542 0257776 5433221 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .|+++..++||.+.+......... ...............+.+++|+|+++
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~~ 244 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF------HLLMEHTTKVNPFGKPITIEDVGDTA 244 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch------HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 56899999999887753 489999999999877543211000 00000000000112367899999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. ..|+.+++.+
T Consensus 245 ~~l~s~~~~~~tG~~~~vdg 264 (285)
T 2p91_A 245 VFLCSDWARAITGEVVHVDN 264 (285)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHcCCcccCCCCCEEEECC
Confidence 99986532 2466777754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.8e-17 Score=136.28 Aligned_cols=193 Identities=17% Similarity=0.108 Sum_probs=129.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEc-CCCCCCCchhh-HhHhhh---cCCcEEEEccCCCH----HHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVR-ESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNH----ESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~----~~~~~~~~ 75 (310)
++++||||+|+||+++++.|+++|++|++++| + +.+.+ ..+.+. ...+.++.+|++|. +++.++++
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS-----EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 68999999999999999999999999999999 5 22221 222232 34688999999999 88888776
Q ss_pred -------CCCEEEEcccchh------------------------------hhhHHHHHHHHHHc---CCc------cEEc
Q 021596 76 -------QVDVVISTVGHAL------------------------------LADQVKIIAAIKEA---GNV------TRFF 109 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~------------------------------~~~~~~~~~aa~~~---~~v------~~~v 109 (310)
++|++||+||... +.++.++++++... + . .++|
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~g~iv 165 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG-GAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCCCCCcEEE
Confidence 7999999998531 33445677777663 3 3 6777
Q ss_pred c-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe
Q 021596 110 P-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL 181 (310)
Q Consensus 110 ~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (310)
+ ||.... ...+....|+.+|...+.+.+. .|+++..++||.+.+. ..+.. .......
T Consensus 166 ~isS~~~~------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~-------~~~~~~~ 230 (276)
T 1mxh_A 166 NLCDAMTD------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQ-------ETQEEYR 230 (276)
T ss_dssp EECCGGGG------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCH-------HHHHHHH
T ss_pred EECchhhc------CCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCH-------HHHHHHH
Confidence 6 543322 1123467899999999887753 4899999999998775 11100 0000000
Q ss_pred cCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 182 GDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 182 ~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
......+++.+++|+|++++.++.++. ..|+.+++.|
T Consensus 231 ~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 269 (276)
T 1mxh_A 231 RKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG 269 (276)
T ss_dssp TTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 000001127899999999999986542 2466777754
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-17 Score=134.56 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=126.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... + .+..+.+|++|.+++.++++ +
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 81 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------K-----GLFGVEVDVTDSDAVDRAFTAVEEHQGP 81 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------T-----TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH--------H-----HhcCeeccCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999984322 1 11238899999999888776 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.++.++++++ ++.+ ..++|+ |+..... ..+....|+
T Consensus 82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 154 (247)
T 1uzm_A 82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW------GIGNQANYA 154 (247)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----------CCHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhcc------CCCCChhHH
Confidence 899999998632 33344555554 4455 678877 5543221 122357899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+..++...+... . ... .........+.+++|+|++++.++.
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~-~~~---~~~~~p~~~~~~~~dvA~~~~~l~s 226 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER----I-QQG---ALQFIPAKRVGTPAEVAGVVSFLAS 226 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH----H-HHH---HGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHH----H-HHH---HHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 999998877753 489999999999877643221100 0 000 0000011247899999999999986
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
++. ..|+.+++.|
T Consensus 227 ~~~~~~~G~~i~vdg 241 (247)
T 1uzm_A 227 EDASYISGAVIPVDG 241 (247)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCcCCEEEECC
Confidence 532 2467777754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.7e-17 Score=135.19 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=121.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP-----DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2221 222221 1225899999999999888776
Q ss_pred ---CCCEEEEcccchh--------------------hhhHHHHHH----HHHHcC-CccEEcc-CCCCCCccccCCCCCC
Q 021596 76 ---QVDVVISTVGHAL--------------------LADQVKIIA----AIKEAG-NVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~--------------------~~~~~~~~~----aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... +.++.++.+ .+++.+ ...++|+ ||.... ...+
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~------~~~~ 181 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ------TPRP 181 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT------CCCT
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC------CCCC
Confidence 6899999998632 233333444 444432 1246776 554322 1223
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++..++||.+...+...+... ............+..++|+|++
T Consensus 182 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~~~~~pedvA~~ 252 (281)
T 4dry_A 182 NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG---------VLQANGEVAAEPTIPIEHIAEA 252 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE---------EECTTSCEEECCCBCHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch---------hhhhhhcccccCCCCHHHHHHH
Confidence 467899999999887753 578999999998877644322111 0000000111247789999999
Q ss_pred HHHHhcCCc
Q 021596 200 TIKAVDDPR 208 (310)
Q Consensus 200 ~~~~l~~~~ 208 (310)
++.++.++.
T Consensus 253 v~fL~s~~~ 261 (281)
T 4dry_A 253 VVYMASLPL 261 (281)
T ss_dssp HHHHHHSCT
T ss_pred HHHHhCCCc
Confidence 999998774
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-17 Score=133.67 Aligned_cols=184 Identities=18% Similarity=0.183 Sum_probs=125.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARR-----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 33322 223332 2357889999999999888775
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... +.++.++++++.. .+ .++|+ ||..... ..+...
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~------~~~~~~ 153 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRV------NVRNAA 153 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTC------CCTTCH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcC------CCCCCc
Confidence 7999999998532 3444555555543 33 47776 5533221 123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..++||.+..++....... .......... .+..+.+++|+|++++.
T Consensus 154 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~---~~~~~~~pedvA~~v~~ 226 (247)
T 2jah_A 154 VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT----ATKEMYEQRI---SQIRKLQAQDIAEAVRY 226 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH----HHHHHHHHHT---TTSCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch----hhHHHHHhcc---cccCCCCHHHHHHHHHH
Confidence 899999998877653 589999999999877653321100 0000000000 11125899999999999
Q ss_pred HhcCC
Q 021596 203 AVDDP 207 (310)
Q Consensus 203 ~l~~~ 207 (310)
++.++
T Consensus 227 l~s~~ 231 (247)
T 2jah_A 227 AVTAP 231 (247)
T ss_dssp HHHSC
T ss_pred HhCCC
Confidence 99765
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=137.08 Aligned_cols=196 Identities=18% Similarity=0.174 Sum_probs=133.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+. ...+..+.+|++|.+++.++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTE-----AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH-----HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999983 2222 222222 2468899999999999888876
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+||... +.++.++++++. +.+ -.++|+ ||.... ...+...
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~ 175 (270)
T 3ftp_A 103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGS------AGNPGQV 175 (270)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------HCCTTBH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhC------CCCCCch
Confidence 7999999998643 444555565553 344 457776 543221 1123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..++||++.......+... .............+.+++|+|++++.
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~p~~r~~~pedvA~~v~~ 247 (270)
T 3ftp_A 176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE--------QQTALKTQIPLGRLGSPEDIAHAVAF 247 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 899999998877653 478999999999876543221100 00001111122357889999999999
Q ss_pred HhcCCc--cCCceEEEcCC
Q 021596 203 AVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~~ 219 (310)
++.+.. ..|+.+++.|.
T Consensus 248 L~s~~~~~itG~~i~vdGG 266 (270)
T 3ftp_A 248 LASPQAGYITGTTLHVNGG 266 (270)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCCCcCCccCcEEEECCC
Confidence 886432 24777777643
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-17 Score=136.63 Aligned_cols=206 Identities=17% Similarity=0.104 Sum_probs=135.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ...+.++.+|++|.+++.++++
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES---AEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999999983210 111223333 2357889999999998887765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+||... +.++.++++++... + ..++|+ ||..... +..+....|+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~~Y~ 179 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQA-----KAVPKHAVYS 179 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTC-----SSCSSCHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhcc-----CCCCCCcchH
Confidence 6899999998642 55667788888775 4 467776 5432211 1111257899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCC---CCCeEEEecC--CCceeEeeccchHHHHH
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAP---PRDKVVILGD--GNPKAVYNKEDDIATYT 200 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~i~~~D~a~~~ 200 (310)
.+|...+.+.+. .|+++..++||.+.+.+............ .......+.. ......+.+++|+|+++
T Consensus 180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 259 (283)
T 1g0o_A 180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 259 (283)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence 999999887753 48999999999998764332110000000 0000000000 01112477899999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. ..|+.+.+.|
T Consensus 260 ~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 260 CFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCccccCcCCCEEEeCC
Confidence 99997542 2466777754
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.6e-17 Score=135.32 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=128.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+++++.|+++| +.|+++.|+ ..+.+.+.......+.++.+|++|.+++.++++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS-----EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC-----HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC-----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 799999999999999999999986 678888887 333322222223568899999999999988876
Q ss_pred CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++ ++.+ .++|+ ||..... ..+....
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~------~~~~~~~ 149 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNM------YFSSWGA 149 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCC------SSCCSHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhcc------CCCCcch
Confidence 6899999998632 34455566655 4444 46666 5433221 1234678
Q ss_pred hHHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCCCC-CCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 131 YYDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 131 y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
|+.+|...+.+.+. .++++..++||.+...+........... ........+........+.+++|+|++++.++
T Consensus 150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~ 229 (254)
T 3kzv_A 150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence 99999999887764 4789999999998876544322110000 00000000000111235788999999999998
Q ss_pred cCC--c-cCCceEEEc
Q 021596 205 DDP--R-TLNKNLYIQ 217 (310)
Q Consensus 205 ~~~--~-~~~~~~~~~ 217 (310)
.++ . ..|+.+++.
T Consensus 230 s~~~~~~itG~~i~vd 245 (254)
T 3kzv_A 230 LHGIPDGVNGQYLSYN 245 (254)
T ss_dssp HHCCCGGGTTCEEETT
T ss_pred hhcccCCCCccEEEec
Confidence 654 2 346666554
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=136.58 Aligned_cols=203 Identities=14% Similarity=0.138 Sum_probs=132.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. ++.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTV-----ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH-----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999983 3322 223332 2458899999999999888876
Q ss_pred --CCCEEEEcccchh--------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL--------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+|+... +.++.++++++. +.+ .++|+ ||.... ...+..
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~------~~~~~~ 157 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVR------HSQAKY 157 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGG------CCCTTC
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhc------cCCCcc
Confidence 6899999997631 344455555543 323 46666 553322 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCC--CCCC-CCeEEEecCCCceeEeeccchHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGA--AAPP-RDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
..|+.+|...+.+.+. .++++..++||++.+........... .... ...............+.+++|+|+
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~ 237 (264)
T 3ucx_A 158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVAS 237 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHH
Confidence 7899999999887753 58999999999987654322110000 0000 000001111122235788999999
Q ss_pred HHHHHhcCCc--cCCceEEEcCC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
+++.++.+.. ..|+.+++.|.
T Consensus 238 ~v~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 238 AILFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHcCccccCCCCCEEEECCC
Confidence 9999886532 24777777643
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.7e-18 Score=140.79 Aligned_cols=197 Identities=12% Similarity=0.078 Sum_probs=131.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+. ...+.+ ....+.++.+|++|.+++.++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL-----PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH-----HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 222 122222 23568899999999999888776
Q ss_pred ---CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.++.++.+++. +.+ ..++|+ |+..... ..+..
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~ 174 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNR------GQALQ 174 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHH------TCTTC
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC------CCCCc
Confidence 6999999998432 445566666653 333 457776 5432211 12235
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc-cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL-PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|...+.+.+. .|+++..++||++.+... ..+... ...............+..++|+|+++
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dvA~~v 248 (277)
T 4fc7_A 175 VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP------QASLSTKVTASPLQRLGNKTEIAHSV 248 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC------HHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC------HHHHHHHhccCCCCCCcCHHHHHHHH
Confidence 7899999999887753 478999999999876421 111000 00000000011123467899999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. ..|+.+++.|
T Consensus 249 ~fL~s~~~~~itG~~i~vdG 268 (277)
T 4fc7_A 249 LYLASPLASYVTGAVLVADG 268 (277)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHcCCccCCcCCCEEEECC
Confidence 99997532 3467777754
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.7e-17 Score=132.62 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=124.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhh----c-CCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK----N-LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~----~-~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. ++.+. .+.+. . ..+.++.+|++|.+++.++++
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSK-----QNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCH-----HHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 33221 12221 1 568899999999999888776
Q ss_pred -----CCCEEEEcccchh------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 -----QVDVVISTVGHAL------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... ..++..+++++ ++.+ ..++|. ||..... +.. +
T Consensus 82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~-~ 154 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKY-----GFA-D 154 (250)
T ss_dssp HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC------------C-C
T ss_pred HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcC-----CCC-C
Confidence 6899999998642 33344455554 4455 567776 5433221 112 2
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .|+++..++||++...+....... .....+++++|+|+++
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~~p~dva~~v 218 (250)
T 3nyw_A 155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP----------------FKDEEMIQPDDLLNTI 218 (250)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC----------------SCGGGSBCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC----------------cccccCCCHHHHHHHH
Confidence 57899999998877753 478999999999876543322110 0112478899999999
Q ss_pred HHHhcCCc
Q 021596 201 IKAVDDPR 208 (310)
Q Consensus 201 ~~~l~~~~ 208 (310)
+.++.++.
T Consensus 219 ~~l~s~~~ 226 (250)
T 3nyw_A 219 RCLLNLSE 226 (250)
T ss_dssp HHHHTSCT
T ss_pred HHHHcCCC
Confidence 99998653
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=133.52 Aligned_cols=203 Identities=17% Similarity=0.202 Sum_probs=131.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--C---CcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--L---GVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~---~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+.. . .+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 33322 2222322 1 57889999999999888776
Q ss_pred -----CCCEEEEcccchh-----------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCC
Q 021596 76 -----QVDVVISTVGHAL-----------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|++||+||... +.++.++++++.. .+ .++|+ |+.....
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~----- 153 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGP----- 153 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSS-----
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccC-----
Confidence 6999999998421 3344555555543 23 57776 5533221
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCC-CCeEEEecCCCceeEeeccc
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPP-RDKVVILGDGNPKAVYNKED 194 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~ 194 (310)
+..+....|+.+|...+.+.+. .|+++..++||.+.+.+............. ...............+.+++
T Consensus 154 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe 233 (280)
T 1xkq_A 154 QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 233 (280)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH
Confidence 1113467899999999887753 589999999999987653321000000000 00000000001112478999
Q ss_pred hHHHHHHHHhcCC---ccCCceEEEcC
Q 021596 195 DIATYTIKAVDDP---RTLNKNLYIQP 218 (310)
Q Consensus 195 D~a~~~~~~l~~~---~~~~~~~~~~~ 218 (310)
|+|++++.++.++ ...|+.+++.|
T Consensus 234 dvA~~v~~l~s~~~~~~~tG~~i~vdg 260 (280)
T 1xkq_A 234 HIANIILFLADRNLSFYILGQSIVADG 260 (280)
T ss_dssp HHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHHHHHhcCcccccCccCCeEEECC
Confidence 9999999988654 23467777754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=136.80 Aligned_cols=195 Identities=16% Similarity=0.108 Sum_probs=130.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++|+||||+|+||+++++.|+++|++|+++.++... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAA---GAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999999999999887655221 1112223332 2468999999999999888876
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHH-----HcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIK-----EAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~-----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.++.++++++. +.+ ..++|+ |+..... ..+....
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~ 176 (267)
T 4iiu_A 104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVM------GNRGQVN 176 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHH------CCTTCHH
T ss_pred CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhcc------CCCCCch
Confidence 7999999998643 444556666653 344 567776 5432211 1234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|...+.+.+. .++++..++||.+........... ............+.+++|+|+++..+
T Consensus 177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~~~~~~~edva~~~~~L 247 (267)
T 4iiu_A 177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA---------LKEAMSMIPMKRMGQAEEVAGLASYL 247 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH---------HHHHHHTCTTCSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH---------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999988776643 478999999999877643211000 00000011113467899999999999
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. ..|+.+++.|
T Consensus 248 ~s~~~~~itG~~i~vdG 264 (267)
T 4iiu_A 248 MSDIAGYVTRQVISING 264 (267)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCcccCccCCEEEeCC
Confidence 86532 3467777753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=136.93 Aligned_cols=198 Identities=15% Similarity=0.089 Sum_probs=130.6
Q ss_pred ceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
++|+||||+ |+||+++++.|+++|++|+++.|+. . ..+.++.+.. ....++.+|++|.+++.++++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~----~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-K----LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-T----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-H----HHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 679999999 9999999999999999999999984 1 1112233321 345789999999999988876
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+|+... +.++.++++++...- +-.++|+ |+..... + .+.
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~-~~~ 158 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----A-IPN 158 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----B-CTT
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-----C-CCC
Confidence 6899999998421 345566777776642 0136766 4432211 1 223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||.+.+......... ...............+.+++|+|+++
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~v 232 (265)
T 1qsg_A 159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGNSA 232 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 56899999999888753 378999999999877643221100 00000000000112467899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.++. ..|+.+++.+.
T Consensus 233 ~~l~s~~~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 233 AFLCSDLSAGISGEVVHVDGG 253 (265)
T ss_dssp HHHTSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhcCccCCEEEECCC
Confidence 99986532 24667777643
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=138.34 Aligned_cols=205 Identities=15% Similarity=0.191 Sum_probs=133.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
++++||||+|+||+++++.|+++|++|+++.|+ +.+.+.+.. ...++.++.+|++|.+++.++++ ++
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQ-ELPGAVFILCDVTQEDDVKTLVSETIRRFGRL 83 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-HhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999999998 333322111 11358899999999999988876 68
Q ss_pred CEEEEcccchh--------------------hhhHHHHHHHHHHc---CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL--------------------LADQVKIIAAIKEA---GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~---~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+||... +.++.++++++... + ..++|+ |+..... ..+....|+.
T Consensus 84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~a 156 (270)
T 1yde_A 84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI------GQAQAVPYVA 156 (270)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH------CCTTCHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC------CCCCCcccHH
Confidence 99999998531 34445566665431 2 357766 5532111 1123578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEe--cCCCceeEeeccchHHHHHHHHh
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL--GDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+|...+.+.+. .++++.+++||.+.+.+....... ......... ........+..++|+|++++.++
T Consensus 157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~ 232 (270)
T 1yde_A 157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAAL----MPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA 232 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTT----SSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhc----ccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999887754 589999999999987653321110 000000000 00001123678999999999888
Q ss_pred cCCc-cCCceEEEcCCCCccCHHH
Q 021596 205 DDPR-TLNKNLYIQPPGNIYSFND 227 (310)
Q Consensus 205 ~~~~-~~~~~~~~~~~~~~~s~~e 227 (310)
.+.. ..|+.+.+.|+. .+.+.+
T Consensus 233 s~~~~itG~~i~vdGG~-~~~~~~ 255 (270)
T 1yde_A 233 SEANFCTGIELLVTGGA-ELGYGC 255 (270)
T ss_dssp HHCTTCCSCEEEESTTT-TSCC--
T ss_pred ccCCCcCCCEEEECCCe-ecccCc
Confidence 6533 246778876543 555433
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.8e-17 Score=135.74 Aligned_cols=200 Identities=16% Similarity=0.134 Sum_probs=127.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc-------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
++++||||+|+||+++++.|+++|++|+++.|..... .......+.+.. ..+.++.+|++|.+++.++++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 90 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDS-DTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFG 90 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGH-HHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999999998863221 111122233333 347889999999999988876
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++||+||... ..++.++++++... + ..++|+ |+...... .+....|+.
T Consensus 91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~------~~~~~~Y~a 163 (262)
T 3ksu_A 91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAY------TGFYSTYAG 163 (262)
T ss_dssp SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHH------HCCCCC---
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccC------CCCCchhHH
Confidence 6899999999643 44556677777653 2 345665 44321111 122467999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .++++..+.||.+...+....... ..............+..++|+|++++.++.+
T Consensus 164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~ 236 (262)
T 3ksu_A 164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK-------ESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236 (262)
T ss_dssp --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch-------HHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence 99999887753 478999999999876543321111 0111111111223578899999999999876
Q ss_pred Cc-cCCceEEEcCC
Q 021596 207 PR-TLNKNLYIQPP 219 (310)
Q Consensus 207 ~~-~~~~~~~~~~~ 219 (310)
.. ..|+.+++-|.
T Consensus 237 ~~~itG~~i~vdGg 250 (262)
T 3ksu_A 237 GWWINGQTIFANGG 250 (262)
T ss_dssp TTTCCSCEEEESTT
T ss_pred CCCccCCEEEECCC
Confidence 33 24677777543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-17 Score=136.81 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=135.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTK---DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999998876321 1112223333 2458899999999999888876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++||+||... +.++.++.+++...- +-.++|+ |+..... ...+....|+.
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~~Y~a 169 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD-----FSVPKHSLYSG 169 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-----CCCTTCHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-----CCCCCCchhHH
Confidence 6899999998643 555667777777653 0126766 4433111 12234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC---CC-CCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA---PP-RDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
+|...+.+.+. .|+++..++||.+...+........... .. ...............+.+++|+|++++.
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 249 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF 249 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 99999887753 5899999999998876543211100000 00 0000000001112346789999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. ..|+.+++.|
T Consensus 250 L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 250 LVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp HTSGGGTTCCSCEEEEST
T ss_pred HcCCccCCccCcEEEeCC
Confidence 986542 2467777754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.1e-17 Score=133.62 Aligned_cols=199 Identities=12% Similarity=0.052 Sum_probs=132.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhcC-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIKQ----- 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~~----- 76 (310)
.++++||||+|+||+++++.|+++|++|+++.++.. ....+....+.. ..+.++.+|+.|.+++.++++.
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK---EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS---HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999988755532 112222333333 3477889999999988877652
Q ss_pred --------CCEEEEcccchh-------------------hhhHHHHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCC
Q 021596 77 --------VDVVISTVGHAL-------------------LADQVKIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 77 --------~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
+|++||+||... ..++.++++++... + ..++|+ |+.... ...|
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~isS~~~~------~~~~ 156 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATR------ISLP 156 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGT------SCCT
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCEEEEeCChhhc------cCCC
Confidence 899999998643 44556677776653 2 246666 543322 1223
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .++++..++||.+...+....... ...............+.+++|+|++
T Consensus 157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~ 230 (255)
T 3icc_A 157 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD------PMMKQYATTISAFNRLGEVEDIADT 230 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS------HHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc------HHHHHhhhccCCcCCCCCHHHHHHH
Confidence 467899999999887653 489999999999877654332111 0000000111112356789999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
+..++.... ..|+.+++.|
T Consensus 231 ~~~l~s~~~~~~tG~~i~vdg 251 (255)
T 3icc_A 231 AAFLASPDSRWVTGQLIDVSG 251 (255)
T ss_dssp HHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHhCcccCCccCCEEEecC
Confidence 999886432 3467777754
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=6.6e-17 Score=134.36 Aligned_cols=201 Identities=14% Similarity=0.145 Sum_probs=129.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 32322 2233322 357889999999998887776
Q ss_pred --CCCEEEEcccch-h-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHA-L-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~-~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||.. . +.++.++++++. +.+ ..++|+ ||.... ...+..
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~ 154 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------KGPPNM 154 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------SCCTTB
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhc------cCCCCC
Confidence 799999999864 1 333444555543 345 567777 553211 112345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccC--------CCCCCCCCCC-eEEEecCCCceeEeec
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLL--------QPGAAAPPRD-KVVILGDGNPKAVYNK 192 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~i~ 192 (310)
..|+.+|...+.+.+. .++++..++||++...+..... ..... .... ....+........+..
T Consensus 155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~r~~~ 233 (262)
T 1zem_A 155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFS-TDPKVVAQQMIGSVPMRRYGD 233 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSC-SSHHHHHHHHHHTSTTSSCBC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccc-cCHHHHHHHHHhcCCCCCCcC
Confidence 7899999998877653 4899999999998776432210 00000 0000 0000000001124678
Q ss_pred cchHHHHHHHHhcCCc--cCCceEEEc
Q 021596 193 EDDIATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
++|+|++++.++.+.. ..|+.+.+.
T Consensus 234 p~dvA~~v~~l~s~~~~~itG~~i~vd 260 (262)
T 1zem_A 234 INEIPGVVAFLLGDDSSFMTGVNLPIA 260 (262)
T ss_dssp GGGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHHcCchhcCcCCcEEecC
Confidence 9999999999886532 235565553
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3e-16 Score=132.11 Aligned_cols=205 Identities=17% Similarity=0.129 Sum_probs=132.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC-----------CCchh-hHhHhhh--cCCcEEEEccCCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-----------APSKS-QLLDHFK--NLGVNFVVGDVLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----------~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~ 69 (310)
.++++||||+|+||+++++.|+++|++|++++|+.+.. ..++. ...+.+. ...+.++.+|++|.++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 90 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA 90 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence 47899999999999999999999999999999973211 01111 1112222 2458889999999999
Q ss_pred HHHHhc-------CCCEEEEcccchh--------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCc
Q 021596 70 LVNAIK-------QVDVVISTVGHAL--------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDV 117 (310)
Q Consensus 70 ~~~~~~-------~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~ 117 (310)
+.++++ ++|++||+||... +.++.++++++. +.++-.++|+ |+....
T Consensus 91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~- 169 (286)
T 3uve_A 91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL- 169 (286)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc-
Confidence 988876 7999999998632 334455555543 3331346766 553322
Q ss_pred cccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc-----CCCCCCCCCCCeE----E--
Q 021596 118 DRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL-----LQPGAAAPPRDKV----V-- 179 (310)
Q Consensus 118 ~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~-----~~~~~~~~~~~~~----~-- 179 (310)
...+....|+.+|...+.+.+. .++++..++||.+...+.... .... ...... .
T Consensus 170 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 241 (286)
T 3uve_A 170 -----KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPD---LENPGPDDMAPIC 241 (286)
T ss_dssp -----SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTT---SSSCCHHHHHHHH
T ss_pred -----cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccc---ccccchhhHHHHH
Confidence 1123467899999999887753 578999999999987654310 0000 000000 0
Q ss_pred EecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 180 ILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 180 ~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.... ..+..+.+++|+|.+++.++.+.. ..|+.+++.|
T Consensus 242 ~~~~-~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 281 (286)
T 3uve_A 242 QMFH-TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA 281 (286)
T ss_dssp HTTC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred Hhhh-ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence 0111 111467899999999999986542 2467777754
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-16 Score=132.76 Aligned_cols=212 Identities=15% Similarity=0.147 Sum_probs=134.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-------Cchh-hHhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-------PSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++++||||+|+||+++++.|+++|++|+++.|+..... ..+. ...+.+. ...+.++.+|++|.+++.++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 92 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 478999999999999999999999999999998732110 1111 1111221 34688999999999999888
Q ss_pred hc-------CCCEEEEcccchh---------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 74 IK-------QVDVVISTVGHAL---------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~---------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++ ++|++||+||... +.++.++++++. +.+...++|+ |+........ ...|
T Consensus 93 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~ 170 (278)
T 3sx2_A 93 LQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--SADP 170 (278)
T ss_dssp HHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--CSSH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--cCCC
Confidence 86 7999999999653 444555666553 3332356666 4432211110 1224
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCC---CCCCCeEEEecCCCceeEeeccchH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAA---APPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
....|+.+|...+.+.+. .++++..++||.+...+.......... ............... ..+.+++|+
T Consensus 171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dv 249 (278)
T 3sx2_A 171 GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDV 249 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHH
T ss_pred CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHH
Confidence 467899999999887753 479999999999987643311000000 000000001111112 467899999
Q ss_pred HHHHHHHhcCCc--cCCceEEEcC
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
|++++.++.+.. ..|+.+++.|
T Consensus 250 A~~v~~l~s~~~~~itG~~i~vdG 273 (278)
T 3sx2_A 250 ANAVAWLVSDQARYITGVTLPVDA 273 (278)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHhCcccccccCCEEeECC
Confidence 999999986542 3467777754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.9e-16 Score=130.38 Aligned_cols=202 Identities=13% Similarity=0.043 Sum_probs=129.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ .++...+.......+.++.+|++|.+++.++++ +
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKS-----AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 333333222234578999999999998887765 6
Q ss_pred CCEEEEcccchh------------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 77 VDVVISTVGHAL------------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
+|++||+||... +.++.++++++.. .+ .++|+ ||.... ...+.
T Consensus 80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~------~~~~~ 151 (281)
T 3zv4_A 80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR--GSVVFTISNAGF------YPNGG 151 (281)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGT------SSSSS
T ss_pred CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--CeEEEEecchhc------cCCCC
Confidence 899999998631 3334455555533 22 36665 443222 11234
Q ss_pred chhhHHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCC-CCCCCe-EEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAA-APPRDK-VVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|...+.+.+. ..+++..+.||.+...+.......... ...... ............+..++|+|.+
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 231 (281)
T 3zv4_A 152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGA 231 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHH
Confidence 57899999999887754 238888999998877643221110000 000000 0000011112357789999999
Q ss_pred HHHHhcCCc---cCCceEEEcC
Q 021596 200 TIKAVDDPR---TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~---~~~~~~~~~~ 218 (310)
++.++.++. ..|+.+++.|
T Consensus 232 v~fL~s~~~~~~itG~~i~vdG 253 (281)
T 3zv4_A 232 YVFFATRGDSLPATGALLNYDG 253 (281)
T ss_dssp HHHHHSTTTSTTCSSCEEEESS
T ss_pred HHHhhcccccccccCcEEEECC
Confidence 999997332 3567777754
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-17 Score=138.64 Aligned_cols=208 Identities=12% Similarity=0.057 Sum_probs=134.3
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+ |+||+++++.|+++|++|+++.|+.. ..+.++.+. ...+.++.+|++|.+++.++++
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-----FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-----GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-----hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 5799999999 99999999999999999999999832 222233331 2358899999999999988876
Q ss_pred ---CCCEEEEcccchh------------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCC
Q 021596 76 ---QVDVVISTVGHAL------------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... ..++.++++++...- +-.++|+ |+..... ..+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~~ 162 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------AIP 162 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS------BCT
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc------CCC
Confidence 5799999998531 344566777776541 0135665 4433221 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|+..+.+.+. .++++..++||.+...+....... ...............+.+++|+|++
T Consensus 163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~pedva~~ 236 (271)
T 3ek2_A 163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF------GKILDFVESNSPLKRNVTIEQVGNA 236 (271)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH------HHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch------HHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 467899999999887753 489999999998877543221100 0000000000111246789999999
Q ss_pred HHHHhcCC--ccCCceEEEcCCCCccCHHHHH
Q 021596 200 TIKAVDDP--RTLNKNLYIQPPGNIYSFNDLV 229 (310)
Q Consensus 200 ~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~ 229 (310)
++.++.+. ...|+.+++.| +..++..+++
T Consensus 237 i~~l~s~~~~~~tG~~i~vdg-G~~~~~~~~~ 267 (271)
T 3ek2_A 237 GAFLLSDLASGVTAEVMHVDS-GFNAVVGGMA 267 (271)
T ss_dssp HHHHHSGGGTTCCSEEEEEST-TGGGBCCCC-
T ss_pred HHHHcCcccCCeeeeEEEECC-Ceeeehhhhh
Confidence 99999753 23467777764 4456555543
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-16 Score=129.77 Aligned_cols=184 Identities=13% Similarity=0.097 Sum_probs=126.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCC---chhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP---SKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+...... ......+.+. ...+.++.+|++|.+++.++++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 88 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTV 88 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999653211 1112222332 2458889999999999888876
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++... + ..++|+ |+..... +..+.
T Consensus 89 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~ 162 (285)
T 3sc4_A 89 EQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLE-----PKWLR 162 (285)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCS-----GGGSC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhcc-----CCCCC
Confidence 7999999999643 44455666666543 3 457776 4432221 11123
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecce-eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYC-FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|+..+.+.+. .|+++..++||. +........... . .....+..++|+|++
T Consensus 163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~------~---------~~~~r~~~pedvA~~ 227 (285)
T 3sc4_A 163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG------D---------EAMARSRKPEVYADA 227 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS------C---------CCCTTCBCTHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc------c---------ccccCCCCHHHHHHH
Confidence 57899999999887753 589999999994 544332221110 0 011245688999999
Q ss_pred HHHHhcCCc
Q 021596 200 TIKAVDDPR 208 (310)
Q Consensus 200 ~~~~l~~~~ 208 (310)
++.++.++.
T Consensus 228 ~~~l~s~~~ 236 (285)
T 3sc4_A 228 AYVVLNKPS 236 (285)
T ss_dssp HHHHHTSCT
T ss_pred HHHHhCCcc
Confidence 999997653
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-16 Score=131.40 Aligned_cols=202 Identities=13% Similarity=0.087 Sum_probs=131.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC--------CCchh-hHhHhhh--cCCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS--------APSKS-QLLDHFK--NLGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--------~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~ 72 (310)
.++++||||+|+||+++++.|+++|++|++++|+.... +..+. ...+.+. ...+.++.+|++|.+++.+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 36899999999999999999999999999999853210 01111 1122222 2458889999999999888
Q ss_pred Hhc-------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccC
Q 021596 73 AIK-------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 73 ~~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~ 121 (310)
+++ ++|++||+||... +.++.++++++ ++.++-.++|+ ||....
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----- 165 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM----- 165 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC-----
Confidence 776 5999999998643 33444455553 44332346776 553322
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc-----C----CCCCCCCCCCeEEEecCCC
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL-----L----QPGAAAPPRDKVVILGDGN 185 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~ 185 (310)
...+....|+.+|...+.+.+. .++++..++||.+...+.... . .... .... ... .
T Consensus 166 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~----~~~-~ 237 (277)
T 3tsc_A 166 -KMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ--LSHV----LTP-F 237 (277)
T ss_dssp -SCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG--GTTT----TCC-S
T ss_pred -CCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH--HHHH----hhh-c
Confidence 1223467899999999887763 479999999999977643210 0 0000 0000 000 1
Q ss_pred ceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 186 PKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 186 ~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.+..+.+++|+|++++.++.++. ..|+.+++.|
T Consensus 238 ~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 272 (277)
T 3tsc_A 238 LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQ 272 (277)
T ss_dssp SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence 11247889999999999997543 2467777754
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=134.06 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=131.0
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+ |+||+++++.|+++|++|+++.|+.. .....+.+.. ..+.++.+|++|.+++.++++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-----LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999 99999999999999999999999843 1112233321 347899999999999888876
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++...- +-.++|+ |+..... ..+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~~~ 154 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------YMAH 154 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------BCTT
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC------CCCC
Confidence 6899999998531 445667777776641 0136666 5433221 1233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .|+++..++||.+...+....... ...............+.+++|+|+++
T Consensus 155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~p~dva~~~ 228 (275)
T 2pd4_A 155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF------RMILKWNEINAPLRKNVSLEEVGNAG 228 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc------HHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 57899999999887753 489999999999877643221100 00000000000012357889999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. ..|+.+++.+
T Consensus 229 ~~l~s~~~~~~tG~~~~vdg 248 (275)
T 2pd4_A 229 MYLLSSLSSGVSGEVHFVDA 248 (275)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCccccCCCCCEEEECC
Confidence 99986532 2456666653
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=134.95 Aligned_cols=208 Identities=14% Similarity=0.108 Sum_probs=132.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-------Cchh-hHhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-------PSKS-QLLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~~-~~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++++||||+|+||+++++.|+++|++|++++|+..... ..+. +..+.+. ...+.++.+|++|.+++.++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 368999999999999999999999999999988733210 1111 1112222 24578899999999998888
Q ss_pred hc-------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCC
Q 021596 74 IK-------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++ ++|++||+||... +.++.++++++ ++.+.-.++|+ ||....
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~------ 199 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL------ 199 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS------
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc------
Confidence 76 6999999998643 34445555555 33332345666 543322
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccc------cCCCCCCCCCCCe-EEEe-cCCCce
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPN------LLQPGAAAPPRDK-VVIL-GDGNPK 187 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~------~~~~~~~~~~~~~-~~~~-~~~~~~ 187 (310)
...+....|+.+|...+.+.+. .|+++..++||.+....... +.... ....... .... .....+
T Consensus 200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p 278 (317)
T 3oec_A 200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL-ENPTREDAAELFSQLTLLP 278 (317)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTC-SSCCHHHHHHHHTTTCSSS
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhc-cccchhHHHHHHhhhccCC
Confidence 1223467899999999887753 48999999999997753211 11100 0000000 0000 011112
Q ss_pred eEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 188 AVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
..+.+++|+|++++.++.+.. ..|+.+++.|
T Consensus 279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG 311 (317)
T 3oec_A 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG 311 (317)
T ss_dssp SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence 468899999999999886542 2467777754
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.70 E-value=7.3e-17 Score=134.92 Aligned_cols=200 Identities=11% Similarity=0.112 Sum_probs=131.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+.... ....+.+. ...+.++.+|++|.+++.++++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST----AAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT----HHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999985432 12223332 3458899999999998888776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..+....|
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~------~~~~~~~Y 181 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR------PKSVVTAY 181 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------CCTTBHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC------CCCCchhh
Confidence 6899999999632 33444555554 4455 567776 5533221 12235679
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .++++..++||.+............ . ...............+..++|+|++++.++
T Consensus 182 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~-~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 257 (275)
T 4imr_A 182 AATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD---P-EGWDEYVRTLNWMGRAGRPEEMVGAALFLA 257 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC---H-HHHHHHHHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC---h-HHHHHHHhhcCccCCCcCHHHHHHHHHHHc
Confidence 9999999887753 4789999999998765432111000 0 000000000001123567899999999988
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.+.. ..|+.+++.|
T Consensus 258 s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 258 SEACSFMTGETIFLTG 273 (275)
T ss_dssp SGGGTTCCSCEEEESS
T ss_pred CcccCCCCCCEEEeCC
Confidence 7542 2466776643
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-16 Score=131.43 Aligned_cols=198 Identities=11% Similarity=0.061 Sum_probs=132.5
Q ss_pred CceEEEEccCcc--hhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGY--IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+ ||+++++.|+++|++|++++|+.. .+. ++.+. ...+.++.+|++|.+++.++++
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---~~~---~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF---KDR---VEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC---HHH---HHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH---HHH---HHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence 378999999966 999999999999999999999841 122 23331 2458999999999999888876
Q ss_pred ---CCCEEEEcccchh------------------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCC
Q 021596 76 ---QVDVVISTVGHAL------------------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+||... +.++.++++++...- +..++|+ |+.... ...
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~------~~~ 173 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE------KAM 173 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT------SCC
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc------cCC
Confidence 5799999998631 344556666665431 1346666 443222 122
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+....|+.+|...+.+.+. .++++..++||.+...+....... ...............+.+++|+|+
T Consensus 174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~pedvA~ 247 (280)
T 3nrc_A 174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF------KKMLDYNAMVSPLKKNVDIMEVGN 247 (280)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH------HHHHHHHHHHSTTCSCCCHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch------HHHHHHHHhcCCCCCCCCHHHHHH
Confidence 3467899999999887753 579999999999887654322110 000000000011124678899999
Q ss_pred HHHHHhcCCc--cCCceEEEcCC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~~ 219 (310)
+++.++.+.. ..|+.+++.|.
T Consensus 248 ~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 248 TVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp HHHHTTSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCcccCCcCCcEEEECCC
Confidence 9999887532 35777777643
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=1.1e-16 Score=134.70 Aligned_cols=176 Identities=14% Similarity=0.106 Sum_probs=121.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhh---cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK---NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++|+||||+|+||+++++.|+++|++|++++|+ +.+.+. .+.+. ...+.++.+|++|.+++.++++
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 333221 12221 1257889999999998888775
Q ss_pred ---CCCEEEEc-ccchh------------------hhhHHHHHHHHHHc---CCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 ---QVDVVIST-VGHAL------------------LADQVKIIAAIKEA---GNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 ---~~d~Vi~~-a~~~~------------------~~~~~~~~~aa~~~---~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+|||+ ++... +.++.++++++... + ..++|+ ||.... ...|...
T Consensus 103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~~~ 175 (286)
T 1xu9_A 103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGK------VAYPMVA 175 (286)
T ss_dssp HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGT------SCCTTCH
T ss_pred HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccc------cCCCCcc
Confidence 79999999 45421 33455555555432 2 247766 443221 1123467
Q ss_pred hhHHHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 130 VYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
.|+.+|...+.+.+. .++++++++||.+.......... + .....+++++|+|+.+
T Consensus 176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~-------~---------~~~~~~~~~~~vA~~i 239 (286)
T 1xu9_A 176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS-------G---------IVHMQAAPKEECALEI 239 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC-------G---------GGGGGCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc-------c---------cccCCCCCHHHHHHHH
Confidence 899999998876642 37889999999887654321110 0 1123568899999999
Q ss_pred HHHhcCC
Q 021596 201 IKAVDDP 207 (310)
Q Consensus 201 ~~~l~~~ 207 (310)
+..++.+
T Consensus 240 ~~~~~~~ 246 (286)
T 1xu9_A 240 IKGGALR 246 (286)
T ss_dssp HHHHHTT
T ss_pred HHHHhcC
Confidence 9998765
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-15 Score=124.08 Aligned_cols=190 Identities=15% Similarity=0.174 Sum_probs=126.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|+ |+|+||||++.||+++++.|+++|++|.+++|+ .++...+.. +..++..+++|++|+++++++++
T Consensus 1 Mn--K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 1 MN--RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID-----EKRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp -C--CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CC--CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 56 899999999999999999999999999999998 333321111 23468889999999999888765
Q ss_pred --CCCEEEEcccchh-------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+++|+||... +.++. .++..+++.+ .++|. ||.... ...|...
T Consensus 73 ~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~------~~~~~~~ 144 (247)
T 3ged_A 73 LQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAF------QSEPDSE 144 (247)
T ss_dssp HSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGT------SCCTTCH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccc------cCCCCCH
Confidence 6999999998654 23333 3444444443 35555 443222 1223467
Q ss_pred hhHHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.|+.+|..+..+.+. .++++..|.||++.......+... ... .-....+..++|+|.+++.+
T Consensus 145 ~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~--------~~~----~~Pl~R~g~pediA~~v~fL 212 (247)
T 3ged_A 145 AYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQE--------DCA----AIPAGKVGTPKDISNMVLFL 212 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHH--------HHH----TSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHH--------HHh----cCCCCCCcCHHHHHHHHHHH
Confidence 899999998877653 378888899988754322211110 000 00112356789999999999
Q ss_pred hcCCccCCceEEEcC
Q 021596 204 VDDPRTLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~~~~~~~~~~~ 218 (310)
+.+.---|+.+.+-|
T Consensus 213 ~s~~~iTG~~i~VDG 227 (247)
T 3ged_A 213 CQQDFITGETIIVDG 227 (247)
T ss_dssp HHCSSCCSCEEEEST
T ss_pred HhCCCCCCCeEEECc
Confidence 975544567777753
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-16 Score=130.11 Aligned_cols=176 Identities=11% Similarity=0.035 Sum_probs=122.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccC--CCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDV--LNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~--~d~~~~~~~~~-- 75 (310)
.++++||||+|+||+++++.|+++|++|++++|+. .+.+ ..+.+. .....++.+|+ .|.+++.++++
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTE-----ASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCH-----HHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 46899999999999999999999999999999983 2322 222222 24577888877 88888877765
Q ss_pred -----CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCC
Q 021596 76 -----QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
++|++||+|+... +.++.++++++ ++.+ ..++|+ |+.... ...
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~------~~~ 161 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGR------KGR 161 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGT------SCC
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhc------CCC
Confidence 7999999998631 44455566666 4444 567776 443222 112
Q ss_pred CcchhhHHHHHHHHHHHHH--------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 126 PAKSVYYDVKARIRRAVEA--------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~--------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
+....|+.+|...+.+.+. .++++..+.||++...+....... .....+..++|+|
T Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------------~~~~~~~~p~dva 225 (247)
T 3i1j_A 162 ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------------ENPLNNPAPEDIM 225 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------------SCGGGSCCGGGGT
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------------cCccCCCCHHHHH
Confidence 3467899999999887753 367788899998877643322111 0112356789999
Q ss_pred HHHHHHhcCC
Q 021596 198 TYTIKAVDDP 207 (310)
Q Consensus 198 ~~~~~~l~~~ 207 (310)
++++.++.+.
T Consensus 226 ~~~~~l~s~~ 235 (247)
T 3i1j_A 226 PVYLYLMGPD 235 (247)
T ss_dssp HHHHHHHSGG
T ss_pred HHHHHHhCch
Confidence 9999988643
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-16 Score=133.44 Aligned_cols=199 Identities=12% Similarity=0.061 Sum_probs=130.8
Q ss_pred CceEEEEccCcc--hhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGY--IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|+ ||+++++.|+++|++|+++.|+ ....+.++.+. ...+.++.+|++|.+++.++++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG-----DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 368999999988 9999999999999999999998 22222222221 2468899999999999988876
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++...- +-.++|+ |+..... ..+.
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------~~~~ 179 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK------VMPN 179 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS------BCTT
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc------CCCc
Confidence 6899999998641 445566777776542 1246666 4433221 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|+..+.+.+. .|+++..++||.+........... ...............+..++|+|+++
T Consensus 180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedvA~~v 253 (293)
T 3grk_A 180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF------RYILKWNEYNAPLRRTVTIDEVGDVG 253 (293)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 57899999999887753 478999999998877543221100 00000000001112467899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.+.. ..|+.+++.|.
T Consensus 254 ~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 254 LYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHcCccccCCcceEEEECCC
Confidence 99986532 34677777643
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.7e-16 Score=132.90 Aligned_cols=199 Identities=17% Similarity=0.076 Sum_probs=132.3
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh--hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF--KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+| +||+++++.|+++|++|+++.|+. ...+.+..+ ....+.++.+|++|.+++.++++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE-----TFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 36899999997 999999999999999999999983 222222222 12457899999999999988876
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++...- +-.++|+ |+.... ...+.
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~------~~~~~ 178 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE------KVVPH 178 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT------SCCTT
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc------cCCCC
Confidence 6899999998641 445566777776542 1236666 443322 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..++||++........... ...............+..++|+|+++
T Consensus 179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedvA~~v 252 (296)
T 3k31_A 179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF------HYILTWNKYNSPLRRNTTLDDVGGAA 252 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch------HHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 67899999999887753 478999999998877543211100 00000000000112467889999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.+.. ..|+.+++.|.
T Consensus 253 ~fL~s~~a~~itG~~i~vdGG 273 (296)
T 3k31_A 253 LYLLSDLGRGTTGETVHVDCG 273 (296)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHcCCccCCccCCEEEECCC
Confidence 99997532 34677777643
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-16 Score=140.21 Aligned_cols=203 Identities=16% Similarity=0.210 Sum_probs=138.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhcCC---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIKQV--- 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~~~--- 77 (310)
.++|+||||+|+||.+++++|+++|++ |++++|+.... +...+..+.+... .+.++.+|+.|.+++.++++.+
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 478999999999999999999999986 89999985422 1222333444433 4788999999999999999865
Q ss_pred ---CEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 78 ---DVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 78 ---d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
|+|||++|... +.++.++.++++..+ ..+||+ ||..... ..+....|+.+
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~------g~~g~~~Yaaa 377 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAF------GAPGLGGYAPG 377 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHT------CCTTCTTTHHH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcC------CCCCCHHHHHH
Confidence 99999998642 566788999998877 788876 5422110 11235689999
Q ss_pred HHHHHHHHH---HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC
Q 021596 135 KARIRRAVE---AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN 211 (310)
Q Consensus 135 K~~~e~~l~---~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 211 (310)
|...+.+.+ ..|+++++++||.+.+..+. .. ....... .....+++++|+++++..++..+..
T Consensus 378 ka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~---~~-------~~~~~~~--~~g~~~i~~e~~a~~l~~~l~~~~~-- 443 (486)
T 2fr1_A 378 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA---EG-------PVADRFR--RHGVIEMPPETACRALQNALDRAEV-- 443 (486)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTCS--
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCeeCCCccc---ch-------hHHHHHH--hcCCCCCCHHHHHHHHHHHHhCCCC--
Confidence 999886654 47999999999988664211 00 0000011 1235789999999999999986532
Q ss_pred ceEEEcCCCCccCHHHHHHHHH
Q 021596 212 KNLYIQPPGNIYSFNDLVSLWE 233 (310)
Q Consensus 212 ~~~~~~~~~~~~s~~e~~~~~~ 233 (310)
.+.+. .+.+..+...+.
T Consensus 444 -~~~v~----~~d~~~~~~~~~ 460 (486)
T 2fr1_A 444 -CPIVI----DVRWDRFLLAYT 460 (486)
T ss_dssp -SCEEC----EECHHHHHHHHT
T ss_pred -eEEEE----eCCHHHHhhhhc
Confidence 22332 356666655443
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=131.53 Aligned_cols=201 Identities=12% Similarity=0.055 Sum_probs=120.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHH----hcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNA----IKQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~----~~~~ 77 (310)
|++++||||+|+||+++++.|+++|++|++++|+.. +.+....+.. ..+..+ |..+.+.+.+. +.++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-----QKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG-----SHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCC
Confidence 568999999999999999999999999999999833 3222222322 233333 66555443332 2379
Q ss_pred CEEEEcccch-h-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 78 DVVISTVGHA-L-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 78 d~Vi~~a~~~-~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
|++||+||.. . +.++.++++++ ++.+ ..++|+ ||..... ..+....|+
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------~~~~~~~Y~ 146 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG------PWKELSTYT 146 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS------CCTTCHHHH
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCccccc------CCCCchHHH
Confidence 9999999865 1 33344444444 4555 567777 5533221 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .++++..++||.+.+.....+........................+.+++|+|++++.++.
T Consensus 147 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s 226 (254)
T 1zmt_A 147 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 999999877753 4899999999998543221111000000000000000000011236789999999999987
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
++. ..|+.+++.|
T Consensus 227 ~~~~~~tG~~~~vdg 241 (254)
T 1zmt_A 227 GSCDYLTGQVFWLAG 241 (254)
T ss_dssp TSCGGGTTCEEEEST
T ss_pred cccCCccCCEEEECC
Confidence 542 2467777754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=130.24 Aligned_cols=205 Identities=14% Similarity=0.093 Sum_probs=133.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC-------CCch-hhHhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-------APSK-SQLLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~-~~~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++++||||+|+||.++++.|+++|++|++++|+.... .+.+ ....+.+. ...+.++.+|++|.+++.++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 36899999999999999999999999999999973211 0111 11222232 24588899999999998888
Q ss_pred hc-------CCCEEEEcccchh--------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccC
Q 021596 74 IK-------QVDVVISTVGHAL--------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~ 121 (310)
++ ++|++||+||... +.++.++++++.. .++..++|+ ||....
T Consensus 108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~----- 182 (299)
T 3t7c_A 108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL----- 182 (299)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT-----
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc-----
Confidence 76 6999999998532 3444555555533 222457776 553322
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc-----CCCCCCCCCCCeEEE------ecC
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL-----LQPGAAAPPRDKVVI------LGD 183 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~~~ 183 (310)
...+....|+.+|..++.+.+. .|+++..++||.+........ .... ........ ...
T Consensus 183 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 258 (299)
T 3t7c_A 183 -RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPD---LENPTVEDFQVASRQMH 258 (299)
T ss_dssp -SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTT---SSSCCHHHHHHHHHHHS
T ss_pred -cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhh---hccchhhHHHHHhhhhc
Confidence 1123467899999999887753 479999999999987654211 0000 00000000 000
Q ss_pred CCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 184 GNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 184 ~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
..+..+..++|+|++++.++.+.. ..|+.+++.|
T Consensus 259 -~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 259 -VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDG 294 (299)
T ss_dssp -SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence 111357889999999999996542 2467777754
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-16 Score=132.32 Aligned_cols=214 Identities=12% Similarity=0.120 Sum_probs=135.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-------Cch-hhHhHhhh--cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-------PSK-SQLLDHFK--NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~~~-~~~~~~l~--~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++++||||+|+||+++++.|+++|++|++++|+..... ..+ ......+. ...+.++.+|++|.+++.++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 368999999999999999999999999999999733210 001 11111222 24588999999999998887
Q ss_pred hc-------CCCEEEEcccchh-----------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCc------cccC
Q 021596 74 IK-------QVDVVISTVGHAL-----------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDV------DRAH 121 (310)
Q Consensus 74 ~~-------~~d~Vi~~a~~~~-----------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~------~~~~ 121 (310)
++ ++|++||+||... +.++.++++++...- +-.++|+ |+..... ....
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~ 169 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGG 169 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccc
Confidence 76 7999999998642 556677778776642 1246666 4421110 0011
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccC-----CCCCCCCCC-C-eEEEecCCCce
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLL-----QPGAAAPPR-D-KVVILGDGNPK 187 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~-----~~~~~~~~~-~-~~~~~~~~~~~ 187 (310)
...+....|+.+|...+.+.+. .++++..++||.+...+..... ......... . ..........+
T Consensus 170 -~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T 3pxx_A 170 -PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP 248 (287)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSS
T ss_pred -cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccC
Confidence 1124467899999999887753 4899999999999876543210 000000000 0 00000111122
Q ss_pred eEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 188 AVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
..+.+++|+|++++.++.+.. ..|+.+++.|
T Consensus 249 ~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG 281 (287)
T 3pxx_A 249 TPYVEASDISNAVCFLASDESRYVTGLQFKVDA 281 (287)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence 468899999999999986542 2467777754
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.6e-16 Score=130.30 Aligned_cols=199 Identities=13% Similarity=0.111 Sum_probs=132.5
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+ |+||.++++.|+++|++|+++.|+.... ..+..+.+. ...+.++.+|++|.+++.++++
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQG---AEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSH---HHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchh---HHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 4689999999 8999999999999999999999885421 122333332 3568889999999999888776
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ |+...... ...+.
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~ 171 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIA----NFPQE 171 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC----CSSSC
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEcccccccc----CCCCC
Confidence 5799999998643 34445555555 5555 557766 44322111 11124
Q ss_pred chhhHHHHHHHHHHHHH----c--CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA----E--GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~----~--~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
...|+.+|...+.+.+. . .+++..+.||++...+...... .....+........+.+++|+|++++
T Consensus 172 ~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~r~~~~~dva~~~~ 243 (267)
T 3gdg_A 172 QTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPK--------ETQQLWHSMIPMGRDGLAKELKGAYV 243 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCH--------HHHHHHHTTSTTSSCEETHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCH--------HHHHHHHhcCCCCCCcCHHHHHhHhh
Confidence 67899999999888764 2 2677888899887654322110 00011111122235678999999999
Q ss_pred HHhcCC--ccCCceEEEcC
Q 021596 202 KAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~--~~~~~~~~~~~ 218 (310)
.++.+. ...|+.+++.|
T Consensus 244 ~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 244 YFASDASTYTTGADLLIDG 262 (267)
T ss_dssp HHHSTTCTTCCSCEEEEST
T ss_pred eeecCccccccCCEEEECC
Confidence 998653 23467777753
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.2e-17 Score=132.26 Aligned_cols=183 Identities=14% Similarity=0.041 Sum_probs=125.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ . . +|++|+++++++++ ++|++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~-----------~------~D~~~~~~v~~~~~~~g~id~l 63 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQ-----T-----------G------LDISDEKSVYHYFETIGAFDHL 63 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGG-----G-----------T------CCTTCHHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCC-----c-----------c------cCCCCHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999999999999999997 1 0 89999999998886 68999
Q ss_pred EEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHH
Q 021596 81 ISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 81 i~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
||+|+... +.++.++++++...- +-.++|+ |+.... ...+....|+.+|...
T Consensus 64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~------~~~~~~~~Y~asK~a~ 137 (223)
T 3uce_A 64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR------KVVANTYVKAAINAAI 137 (223)
T ss_dssp EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT------SCCTTCHHHHHHHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc------cCCCCchHHHHHHHHH
Confidence 99999651 445566777776542 0125665 543322 1223467899999999
Q ss_pred HHHHHH----c-CCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 139 RRAVEA----E-GIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 139 e~~l~~----~-~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
+.+.+. . .+++..++||.+............ ................+.+++|+|++++.++..+...|+.
T Consensus 138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~ 213 (223)
T 3uce_A 138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADD----RDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTV 213 (223)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHH----HHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhh----HHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcE
Confidence 887753 2 388889999988776433221100 0000000000111235778999999999999865556777
Q ss_pred EEEcC
Q 021596 214 LYIQP 218 (310)
Q Consensus 214 ~~~~~ 218 (310)
+++.|
T Consensus 214 i~vdg 218 (223)
T 3uce_A 214 IDVDG 218 (223)
T ss_dssp EEEST
T ss_pred EEecC
Confidence 77764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.7e-16 Score=128.10 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=131.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc----CCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN----LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~----~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+. .+.+ ..+.+.. ..+.++.+|++|.+++.++++
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDG-----ERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 2321 2222321 248889999999999888775
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++++++.. .+ ..++|+ ||.... ...+.
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------~~~~~ 155 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLAS------QPEPH 155 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGT------SCCTT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccC------CCCCC
Confidence 6899999998643 4445556666543 33 456776 443221 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCC-CCCCeEE-Eec--CCCceeEeeccchH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDKVV-ILG--DGNPKAVYNKEDDI 196 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~i~~~D~ 196 (310)
...|+.+|...+.+.+. .|+++..++||.+............... ....... ... .......+..++|+
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 235 (265)
T 3lf2_A 156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEA 235 (265)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHH
Confidence 68899999999887753 4799999999998776433222110000 0000000 000 00111346789999
Q ss_pred HHHHHHHhcCCc--cCCceEEEcC
Q 021596 197 ATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 197 a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
|++++.++.+.. ..|+.+++.|
T Consensus 236 A~~v~fL~s~~~~~itG~~i~vdG 259 (265)
T 3lf2_A 236 ARAILFLASPLSAYTTGSHIDVSG 259 (265)
T ss_dssp HHHHHHHHSGGGTTCCSEEEEESS
T ss_pred HHHHHHHhCchhcCcCCCEEEECC
Confidence 999999886532 2466777754
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-16 Score=132.05 Aligned_cols=195 Identities=16% Similarity=0.220 Sum_probs=130.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++++||||+|+||+++++.|+++|+ +|+++.|+ .++.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-----LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 36899999999999999999999987 89999998 33322 222222 2357889999999999998886
Q ss_pred -------CCCEEEEcccchh--------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCC
Q 021596 76 -------QVDVVISTVGHAL--------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~--------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
++|++||+||... +.++.++++++ ++.+ ..++|+ ||.... .
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~------~ 180 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGR------D 180 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------S
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhc------C
Confidence 5899999998531 34455555555 4555 567776 543322 1
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..+....|+.+|...+.+.+. .|+++..++||++...+....... .......... . ..++.++|+
T Consensus 181 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~-~---~~p~~pedv 252 (287)
T 3rku_A 181 AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG----NEEQAKNVYK-D---TTPLMADDV 252 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT----CHHHHHHHHT-T---SCCEEHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC----cHHHHHHhhc-c---cCCCCHHHH
Confidence 223467899999999887753 589999999999977543211100 0000000000 0 123478999
Q ss_pred HHHHHHHhcCCcc--CCceEEEcC
Q 021596 197 ATYTIKAVDDPRT--LNKNLYIQP 218 (310)
Q Consensus 197 a~~~~~~l~~~~~--~~~~~~~~~ 218 (310)
|++++.++.++.. .++.+.+.+
T Consensus 253 A~~v~~l~s~~~~~i~g~~i~v~~ 276 (287)
T 3rku_A 253 ADLIVYATSRKQNTVIADTLIFPT 276 (287)
T ss_dssp HHHHHHHHTSCTTEEEEEEEEEET
T ss_pred HHHHHHHhCCCCCeEecceEEeeC
Confidence 9999999976532 355666643
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=129.71 Aligned_cols=184 Identities=18% Similarity=0.224 Sum_probs=112.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHH---HHh---cCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLV---NAI---KQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~---~~~---~~~ 77 (310)
.++++||||+|+||+++++.|++ |+.|+++.|+ +.+...+.. ..++.++.+|+.+.++.. +.+ .++
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN-----PEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999987 8999999998 333332222 356889999998875522 122 268
Q ss_pred CEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+||... +.++.++.+++ ++.+ .++|+ ||..... ..+....|+.
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~------~~~~~~~Y~a 148 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNG------PHPGNTIYAA 148 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------------CHHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCccccc------CCCCchHHHH
Confidence 99999998753 23333334443 4443 46665 4432221 1234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|...+.+.+. .++++..++||.+............ . .......+++++|+|++++.+++.
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----~-------~~~~~~~~~~p~dvA~~i~~l~~~ 216 (245)
T 3e9n_A 149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ-----G-------TNFRPEIYIEPKEIANAIRFVIDA 216 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCGGGSCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh-----h-------cccccccCCCHHHHHHHHHHHHcC
Confidence 99999888753 5799999999998876543322210 0 001113578899999999999987
Q ss_pred CccCCceEEE
Q 021596 207 PRTLNKNLYI 216 (310)
Q Consensus 207 ~~~~~~~~~~ 216 (310)
+. .+.++++
T Consensus 217 ~~-~~~~~~i 225 (245)
T 3e9n_A 217 GE-TTQITNV 225 (245)
T ss_dssp CT-TEEEEEE
T ss_pred CC-ccceeee
Confidence 65 3455554
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-15 Score=125.90 Aligned_cols=182 Identities=10% Similarity=0.050 Sum_probs=121.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCC---chhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP---SKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|.||+++++.|+++|++|++++|+...... ........+. ...+.++.+|++|.+++.++++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999653211 0111222222 3457889999999999888776
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHHH----HcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAIK----EAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~----~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++..+.+++. +.+ ..++|+ |+....... ..+.
T Consensus 86 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----~~~~ 160 (274)
T 3e03_A 86 DTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPA----WWGA 160 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHH----HHHH
T ss_pred HHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC----CCCC
Confidence 6899999998642 334445555553 344 467776 443322110 0123
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecce-eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYC-FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|...+.+.+. .|+++..+.||. +...+.... .. .....+..++|+|++
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~--------~~---------~~~~~~~~pedvA~~ 223 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML--------PG---------VDAAACRRPEIMADA 223 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------C---------CCGGGSBCTHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc--------cc---------ccccccCCHHHHHHH
Confidence 56799999999887753 479999999984 444322110 00 111236789999999
Q ss_pred HHHHhcCC
Q 021596 200 TIKAVDDP 207 (310)
Q Consensus 200 ~~~~l~~~ 207 (310)
++.++.+.
T Consensus 224 v~~l~s~~ 231 (274)
T 3e03_A 224 AHAVLTRE 231 (274)
T ss_dssp HHHHHTSC
T ss_pred HHHHhCcc
Confidence 99999754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-15 Score=128.17 Aligned_cols=192 Identities=15% Similarity=0.112 Sum_probs=128.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCC---chhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP---SKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|.||.++++.|+++|++|+++.|+...... ......+.+.. ..+.++.+|++|.+++.++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999999998654211 01122233333 347888999999999888876
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+|+... +.++.++++++ ++.+ ..++|+ |+...... ...+.
T Consensus 125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~----~~~~~ 199 (346)
T 3kvo_A 125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNP----VWFKQ 199 (346)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCG----GGTSS
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCC----CCCCC
Confidence 7999999999632 44555666666 3444 567777 54332211 01234
Q ss_pred chhhHHHHHHHHHHHHH------cCCCEEEEecce-eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA------EGIPYTYVESYC-FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~------~~~~~~i~rp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..+.||. +.......+... .....+..++|+|+++
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~~----------------~~~~r~~~pedvA~~v 263 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGGP----------------GIESQCRKVDIIADAA 263 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC------------------CGGGCBCTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhccc----------------cccccCCCHHHHHHHH
Confidence 67899999998877753 478889999985 444332211110 0112466889999999
Q ss_pred HHHhcCCccCCceEEE
Q 021596 201 IKAVDDPRTLNKNLYI 216 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~ 216 (310)
+.++.+.....+.+.+
T Consensus 264 ~~L~s~~~~itG~~iv 279 (346)
T 3kvo_A 264 YSIFQKPKSFTGNFVI 279 (346)
T ss_dssp HHHHTSCTTCCSCEEE
T ss_pred HHHHhcCCCCCceEEE
Confidence 9999764333333333
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-15 Score=123.20 Aligned_cols=192 Identities=14% Similarity=0.141 Sum_probs=127.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
-|+++||||++.||+++++.|.++|.+|.++.|+.... +......+..+.+|++|+++++++++ ++|++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV--------HAPRHPRIRREELDITDSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST--------TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--------hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 47999999999999999999999999999999985432 22234578899999999999998887 69999
Q ss_pred EEcccchh-----------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHH
Q 021596 81 ISTVGHAL-----------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 81 i~~a~~~~-----------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
+|+||... +.+ ++.++..+++.+ .++|. ||.... ...|....|+.+|..+
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~------~~~~~~~~Y~asKaav 154 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYST------FGSADRPAYSASKGAI 154 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGT------SCCSSCHHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeecccc------CCCCCCHHHHHHHHHH
Confidence 99998654 222 233444444443 46666 443222 1223467899999999
Q ss_pred HHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--c
Q 021596 139 RRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--T 209 (310)
Q Consensus 139 e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~ 209 (310)
..+.+. .|+++..|.||++...+...+... .+... . +........+..++|+|.+++.++.+.. -
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~----~~~~~-~-~~~~~PlgR~g~peeiA~~v~fLaSd~a~~i 228 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD----VEATR-R-IMQRTPLARWGEAPEVASAAAFLCGPGASFV 228 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC----HHHHH-H-HHHTCTTCSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC----HHHHH-H-HHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence 877753 589999999998876543222110 00000 0 0000111246778999999999886532 2
Q ss_pred CCceEEEc
Q 021596 210 LNKNLYIQ 217 (310)
Q Consensus 210 ~~~~~~~~ 217 (310)
-|+.+.+-
T Consensus 229 TG~~l~VD 236 (242)
T 4b79_A 229 TGAVLAVD 236 (242)
T ss_dssp CSCEEEES
T ss_pred cCceEEEC
Confidence 46666664
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-15 Score=128.55 Aligned_cols=185 Identities=14% Similarity=0.122 Sum_probs=123.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc---CCcEEEEccCCCH-HHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN---LGVNFVVGDVLNH-ESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~---~~~~~v~~D~~d~-~~~~~~~~--- 75 (310)
.++|+||||+|+||.++++.|+++|++|++++|+. .+. +..+.+.. ..+.++.+|++|. +++..+++
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV-----TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 46899999999999999999999999999999983 222 22233322 3588999999998 77776655
Q ss_pred ----CCCEEEEcccchh-------------------------------------------------hhhHHHHHHHH---
Q 021596 76 ----QVDVVISTVGHAL-------------------------------------------------LADQVKIIAAI--- 99 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------------------------------------~~~~~~~~~aa--- 99 (310)
++|++||+||... +.++..+++++
T Consensus 87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 7999999999630 33444455554
Q ss_pred -HHcCCccEEcc-CCCCCCccc-------------------------------------cCCCCCCcchhhHHHHHHHHH
Q 021596 100 -KEAGNVTRFFP-SEFGNDVDR-------------------------------------AHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 100 -~~~~~v~~~v~-s~~~~~~~~-------------------------------------~~~~~~~~~~~y~~~K~~~e~ 140 (310)
++.+ ..++|+ ||....... ......+....|+.+|+..+.
T Consensus 167 l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 167 LQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp HTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred hccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 3344 567776 443221100 000112345789999999988
Q ss_pred HHHH-----cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCcc-CCceE
Q 021596 141 AVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRT-LNKNL 214 (310)
Q Consensus 141 ~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~ 214 (310)
+.+. .++++..+.||++...+.... .....++.++.++.++..+.. .++.+
T Consensus 246 ~~~~la~e~~~i~v~~v~PG~v~T~~~~~~-----------------------~~~~~~~~a~~~~~~~~~~~~~~~g~~ 302 (311)
T 3o26_A 246 YTRVLANKIPKFQVNCVCPGLVKTEMNYGI-----------------------GNYTAEEGAEHVVRIALFPDDGPSGFF 302 (311)
T ss_dssp HHHHHHHHCTTSEEEEECCCSBCSGGGTTC-----------------------CSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred HHHHHHhhcCCceEEEecCCceecCCcCCC-----------------------CCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence 8754 357888888988866532211 124678899999998876532 34444
Q ss_pred EEc
Q 021596 215 YIQ 217 (310)
Q Consensus 215 ~~~ 217 (310)
+.+
T Consensus 303 ~~~ 305 (311)
T 3o26_A 303 YDC 305 (311)
T ss_dssp ETC
T ss_pred ecc
Confidence 443
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-15 Score=125.32 Aligned_cols=187 Identities=14% Similarity=0.067 Sum_probs=118.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh--cCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK--NLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+ +.+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRH-----LDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 32221 222232 2357889999999998877654
Q ss_pred ---CCCEEEEccc--ch-------h-----------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccC
Q 021596 76 ---QVDVVISTVG--HA-------L-----------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAH 121 (310)
Q Consensus 76 ---~~d~Vi~~a~--~~-------~-----------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~ 121 (310)
++|++||+|| .. . +.++..+ +..+++.+ ..++|+ ||.....
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~---- 154 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ---- 154 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS----
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC----
Confidence 4799999993 22 0 1223333 33344455 567776 5543221
Q ss_pred CCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecC-CCceeEeecc
Q 021596 122 GAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGD-GNPKAVYNKE 193 (310)
Q Consensus 122 ~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 193 (310)
.++...|+.+|...+.+.+. .++++..++||++...+....... ........... ......+..+
T Consensus 155 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p 227 (260)
T 2qq5_A 155 ---YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAK----EEVLQDPVLKQFKSAFSSAETT 227 (260)
T ss_dssp ---CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHHH
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcc----ccccchhHHHHHHhhhccCCCH
Confidence 11246899999999888753 489999999999877653321110 00000000000 0000123578
Q ss_pred chHHHHHHHHhcCC
Q 021596 194 DDIATYTIKAVDDP 207 (310)
Q Consensus 194 ~D~a~~~~~~l~~~ 207 (310)
+|+|++++.++.++
T Consensus 228 e~va~~v~~l~s~~ 241 (260)
T 2qq5_A 228 ELSGKCVVALATDP 241 (260)
T ss_dssp HHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHhcCc
Confidence 99999999998765
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=128.30 Aligned_cols=198 Identities=14% Similarity=0.151 Sum_probs=130.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcC--CcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNL--GVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+++++.|.++|.+|.+..|+. ++. +..+++... .+..+.+|++|+++++++++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~-----~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRA-----TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH-----HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999983 222 233444433 47788999999999888776
Q ss_pred --CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+++|+||... +.+ ++.++..+.+.++-.++|. ||.... ...|...
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~------~~~~~~~ 157 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ------AARPTVA 157 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SBCTTCH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc------CCCCCch
Confidence 5899999998754 223 3344444444322457776 443322 1223467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|..+..+.+. .|+++..|.||++........... ...... ....-....+..++|+|.+++.
T Consensus 158 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~----~~~~~~--~~~~~Pl~R~g~pediA~~v~f 231 (255)
T 4g81_D 158 PYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED----KQFDSW--VKSSTPSQRWGRPEELIGTAIF 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC----HHHHHH--HHHHSTTCSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC----HHHHHH--HHhCCCCCCCcCHHHHHHHHHH
Confidence 899999999877753 589999999999876644322111 000000 0000011236678999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. --|+.+.+-|
T Consensus 232 L~S~~a~~iTG~~i~VDG 249 (255)
T 4g81_D 232 LSSKASDYINGQIIYVDG 249 (255)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhCCCcCCEEEECC
Confidence 885432 2466666643
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=124.41 Aligned_cols=198 Identities=13% Similarity=0.092 Sum_probs=132.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+.+++.|.++|.+|.++.|+ .++. +..+++.. ..+..+.+|++|+++++++++
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~-----~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL-----EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 3333 23344443 347889999999999888775
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|+++|+||... ...++.++..+++++ -.++|. ||.... ...|..
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~------~~~~~~ 154 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGI------RGGFAG 154 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------CSSSSC
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhc------CCCCCC
Confidence 6999999998532 333455566666666 467776 443322 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEE-EecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV-ILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|..+..+.+. .|+++..|.||++...+....... ...... ..........+..++|+|.++
T Consensus 155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~~~~R~g~pediA~~v 229 (254)
T 4fn4_A 155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-----SELGMRTLTKLMSLSSRLAEPEDIANVI 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-----CHHHHHHHHHHHTTCCCCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-----cHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 7899999999877753 589999999998876543221111 000000 000000012466789999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. --|+.+.+-|
T Consensus 230 ~fLaSd~a~~iTG~~i~VDG 249 (254)
T 4fn4_A 230 VFLASDEASFVNGDAVVVDG 249 (254)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhcCCcCCEEEeCC
Confidence 99886532 2466666643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.6e-15 Score=121.06 Aligned_cols=200 Identities=15% Similarity=0.155 Sum_probs=129.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||++.||+++++.|.++|.+|.++.|+.+. ....+.+. ...+..+.+|++|.++++++++
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD-----GAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCC-----HHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCccc-----HHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998442 22223332 3568999999999998887765
Q ss_pred -CCCEEEEcccchh------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+++|+||... +.+ .+.++..+++.+ .++|. ||.... ...|....|
T Consensus 82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~------~~~~~~~~Y 153 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAV------TGQGNTSGY 153 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHH------HCCSSCHHH
T ss_pred CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhc------cCCCCchHH
Confidence 6999999998643 222 333444444443 35665 443221 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCce-eEeeccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPK-AVYNKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~ 203 (310)
+.+|..+..+.+. .|+++..|.||.+............. .......-....-.. ..+..++|+|.+++.+
T Consensus 154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~plg~R~g~peeiA~~v~fL 231 (258)
T 4gkb_A 154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFE--DPEAKLAEIAAKVPLGRRFTTPDEIADTAVFL 231 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhccc--ChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 9999999887753 58999999999987765433222100 000000000000000 2467789999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. --|+.+.+-|
T Consensus 232 aS~~a~~iTG~~i~VDG 248 (258)
T 4gkb_A 232 LSPRASHTTGEWLFVDG 248 (258)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhcCccCCeEEECC
Confidence 86532 2467777754
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=127.85 Aligned_cols=151 Identities=19% Similarity=0.265 Sum_probs=107.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhcC--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIKQ-- 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~~-- 76 (310)
.++|+||||+|+||+++++.|+++|++|+++.|+.... .......+... ...+.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH-HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 46899999999999999999999999999988874332 11111112211 24688999999999999999874
Q ss_pred ---CCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 77 ---VDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 77 ---~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
+|++||+||... +.++.++++++ ++.+ ..++|+ ||..... ..+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~------~~~~~~ 153 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM------GLPFND 153 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS------CCTTCH
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccc------CCCCCh
Confidence 899999998532 34455566554 4555 678877 4433221 123457
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL 162 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~ 162 (310)
.|+.+|..++.+.+. .+++++.++||.+..++.
T Consensus 154 ~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 899999999887753 589999999999877653
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-15 Score=128.00 Aligned_cols=193 Identities=11% Similarity=0.009 Sum_probs=127.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEE-cCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHH-----------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHE----------- 68 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~----------- 68 (310)
++++||||+|+||+++++.|+++|++|++++ |+ +.+.. ..+.+. ...+.++.+|+.|.+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 121 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence 6899999999999999999999999999999 87 32222 222332 345889999999998
Q ss_pred ------HHHHHhc-------CCCEEEEcccchh---------------------------------hhhHHHHHHHHH--
Q 021596 69 ------SLVNAIK-------QVDVVISTVGHAL---------------------------------LADQVKIIAAIK-- 100 (310)
Q Consensus 69 ------~~~~~~~-------~~d~Vi~~a~~~~---------------------------------~~~~~~~~~aa~-- 100 (310)
++.++++ ++|++||+||... +.++..+++++.
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 201 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 201 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 7999999998531 222334444443
Q ss_pred --HcCC-----ccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccccccc
Q 021596 101 --EAGN-----VTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNL 165 (310)
Q Consensus 101 --~~~~-----v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~ 165 (310)
+.+. ..++|+ |+..... ..+....|+.+|..++.+.+. .++++..++||++.... ..+
T Consensus 202 m~~~~~~~~~~~g~IV~isS~~~~~------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~ 274 (328)
T 2qhx_A 202 VAGTPAKHRGTNYSIINMVDAMTNQ------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP 274 (328)
T ss_dssp HHHSCGGGSCSCEEEEEECCTTTTS------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC
T ss_pred HHhcCCcCCCCCcEEEEECchhhcc------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc
Confidence 3220 356776 4433221 123467899999999887753 48999999999987654 211
Q ss_pred CCCCCCCCCCCeEEEecCCCcee-EeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 166 LQPGAAAPPRDKVVILGDGNPKA-VYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.. ............ .+..++|+|++++.++.+.. ..|+.+++.|
T Consensus 275 ~~---------~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 321 (328)
T 2qhx_A 275 PA---------VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 321 (328)
T ss_dssp HH---------HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HH---------HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 00 000000000011 36789999999999996432 2466777754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.63 E-value=5.9e-15 Score=124.27 Aligned_cols=195 Identities=15% Similarity=0.085 Sum_probs=127.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh---cCCcEEEEccCCC----HHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLN----HESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d----~~~~~~~~~ 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|+.. .+.. ..+.+. ...+.++.+|++| .+++.++++
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~----~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSA----EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCH----HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCch----HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 368999999999999999999999999999999831 2221 222232 3458899999999 888887775
Q ss_pred -------CCCEEEEcccchh-----------------------------hhhHHHHHHHHHHcC---C------ccEEcc
Q 021596 76 -------QVDVVISTVGHAL-----------------------------LADQVKIIAAIKEAG---N------VTRFFP 110 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-----------------------------~~~~~~~~~aa~~~~---~------v~~~v~ 110 (310)
++|++||+||... +.++..+++++...- . ..++|+
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 178 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN 178 (288)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence 7999999998531 222444555554321 0 246666
Q ss_pred -CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEec
Q 021596 111 -SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182 (310)
Q Consensus 111 -s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (310)
|+.... ...+....|+.+|+..+.+.+. .|+++..++||.+.+.+ . .... . .... ..
T Consensus 179 isS~~~~------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~~----~-~~~~--~~ 243 (288)
T 2x9g_A 179 LCDAMVD------QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGEE----E-KDKW--RR 243 (288)
T ss_dssp ECCTTTT------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCHH----H-HHHH--HH
T ss_pred Eeccccc------CCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cChH----H-HHHH--Hh
Confidence 443322 1123467899999998877653 48999999999887764 2 1000 0 0000 00
Q ss_pred CCCceeEe-eccchHHHHHHHHhcCC--ccCCceEEEcC
Q 021596 183 DGNPKAVY-NKEDDIATYTIKAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 183 ~~~~~~~~-i~~~D~a~~~~~~l~~~--~~~~~~~~~~~ 218 (310)
......+ ..++|+|++++.++.+. ...|+.+.+.|
T Consensus 244 -~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 281 (288)
T 2x9g_A 244 -KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDG 281 (288)
T ss_dssp -TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence 0001124 68899999999999653 22466666653
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=133.82 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=131.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.++++||||+|.||.++++.|.++|++|+++.|+. ......+.....++.++.+|++|.+++.++++ +
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~-----~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~ 287 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGG 287 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG-----GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc-----cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999872 22222233334577899999999999888775 4
Q ss_pred -CCEEEEcccchh-------------------hhhHHHHHHHHHHc----CCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 77 -VDVVISTVGHAL-------------------LADQVKIIAAIKEA----GNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 77 -~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~----~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
+|+|||+||... +.++.++.+++... + ..+||+ ||..... ..+....|
T Consensus 288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~------g~~g~~~Y 360 (454)
T 3u0b_A 288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIA------GNRGQTNY 360 (454)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHH------CCTTCHHH
T ss_pred CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCC------CCCCCHHH
Confidence 999999998753 56677888888765 3 457776 5532211 12346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|...+.+.+. .|+++..+.||++...+....... .... .........+..++|+|+++..++
T Consensus 361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~--~~~~~~l~r~g~pedvA~~v~fL~ 432 (454)
T 3u0b_A 361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA------TREV--GRRLNSLFQGGQPVDVAELIAYFA 432 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHH--HHHSBTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh------hHHH--HHhhccccCCCCHHHHHHHHHHHh
Confidence 9999987776643 589999999999877643322110 0000 000011123467899999999988
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.... ..|+++++.|
T Consensus 433 s~~a~~itG~~i~vdG 448 (454)
T 3u0b_A 433 SPASNAVTGNTIRVCG 448 (454)
T ss_dssp CGGGTTCCSCEEEESS
T ss_pred CCccCCCCCcEEEECC
Confidence 6432 3467777754
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-15 Score=134.38 Aligned_cols=204 Identities=16% Similarity=0.196 Sum_probs=139.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhcC--CC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIKQ--VD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~~--~d 78 (310)
.++|+||||+|+||.+++++|.++|++ |+++.|+.... +...+..+.+...+ +.++.+|+.|.+++.+++++ +|
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA-PGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 579999999999999999999999984 88889985332 22233334454444 77889999999999999975 99
Q ss_pred EEEEcccchh-------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHH
Q 021596 79 VVISTVGHAL-------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 79 ~Vi~~a~~~~-------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~ 137 (310)
+|||++|... +.++.++.+++... + ..+||+ ||..... ..+....|+.+|..
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~------g~~g~~~YaaaKa~ 410 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTW------GNAGQGAYAAANAA 410 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTT------CCTTBHHHHHHHHH
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcC------CCCCCHHHHHHHHH
Confidence 9999998643 45567778877665 5 677776 5432211 12346789999999
Q ss_pred HHHHHH---HcCCCEEEEecceecc-ccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCce
Q 021596 138 IRRAVE---AEGIPYTYVESYCFDG-YFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKN 213 (310)
Q Consensus 138 ~e~~l~---~~~~~~~i~rp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 213 (310)
.+.+.+ ..|+++++++||.+.+ .+..... .... . .....+++++|+++++..++..+. ..
T Consensus 411 ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~--------~~~~--~---~~g~~~l~~e~~a~~l~~al~~~~---~~ 474 (511)
T 2z5l_A 411 LDALAERRRAAGLPATSVAWGLWGGGGMAAGAG--------EESL--S---RRGLRAMDPDAAVDALLGAMGRND---VC 474 (511)
T ss_dssp HHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH--------HHHH--H---HHTBCCBCHHHHHHHHHHHHHHTC---SE
T ss_pred HHHHHHHHHHcCCcEEEEECCcccCCccccccc--------HHHH--H---hcCCCCCCHHHHHHHHHHHHhCCC---CE
Confidence 988775 4689999999988732 2111100 0000 0 112457899999999999997653 22
Q ss_pred EEEcCCCCccCHHHHHHHHHHH
Q 021596 214 LYIQPPGNIYSFNDLVSLWERK 235 (310)
Q Consensus 214 ~~~~~~~~~~s~~e~~~~~~~~ 235 (310)
+.+. .+.+..+...+...
T Consensus 475 v~v~----~~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 475 VTVV----DVDWERFAPATNAI 492 (511)
T ss_dssp EEEC----CBCHHHHHHHHHHH
T ss_pred EEEE----eCCHHHHHhhhccc
Confidence 3332 35666666655443
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=124.76 Aligned_cols=202 Identities=11% Similarity=0.089 Sum_probs=125.4
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||+| .||.++++.|.++|++|.+..|+.... .+..+.++.+....+..+++|++|++++.++++
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR-KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 47899999887 899999999999999999999984321 111112222233468899999999999887765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+++|+++... ......+..++... .+-.++|. ||.... ...|...
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~------~~~~~~~ 158 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE------FAVQNYN 158 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT------SCCTTTH
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc------cCcccch
Confidence 6999999998532 11112222333221 11235665 443222 1233467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|..+..+.+. .|+++..|.||++........... ......+........+..++|+|.+++.
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~------~~~~~~~~~~~Pl~R~g~peevA~~v~f 232 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF------NTILKEIKERAPLKRNVDQVEVGKTAAY 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC------HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999999877653 589999999998876543222110 0000000000001135678999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. --|+.+.+-|
T Consensus 233 L~Sd~a~~iTG~~i~VDG 250 (256)
T 4fs3_A 233 LLSDLSSGVTGENIHVDS 250 (256)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCccCCEEEECc
Confidence 886532 2466666643
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-16 Score=135.08 Aligned_cols=156 Identities=11% Similarity=0.043 Sum_probs=105.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~ 72 (310)
|+.+|+|+||||+||||++++..|+++|+ +|+++++... ..+.. ....+.+..+.++ +|+.+.+++.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~---~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~ 76 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLL-AGLEATDDPKV 76 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc---hhhccchhhhhhccccccc-CCeEeccChHH
Confidence 77778999999999999999999999986 7999887621 01111 1122333223333 57766667788
Q ss_pred HhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcC--CccEEccCCCCC---CccccCCCCCCcchhhHHH
Q 021596 73 AIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAG--NVTRFFPSEFGN---DVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~--~v~~~v~s~~~~---~~~~~~~~~~~~~~~y~~~ 134 (310)
+++++|+|||+|+... +.++.++++++++.+ +++.+++|+-.. .......+..++...|+.+
T Consensus 77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~t 156 (327)
T 1y7t_A 77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMT 156 (327)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECC
T ss_pred HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccc
Confidence 8999999999998653 677899999999874 123344443210 1111221123346789999
Q ss_pred HHHHHHHHH----HcCCCEEEEecceeccc
Q 021596 135 KARIRRAVE----AEGIPYTYVESYCFDGY 160 (310)
Q Consensus 135 K~~~e~~l~----~~~~~~~i~rp~~~~~~ 160 (310)
|...|++.. ..+++.+++|+..++|+
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~ 186 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGN 186 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBC
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcC
Confidence 999888654 46899999998765554
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-14 Score=122.98 Aligned_cols=194 Identities=11% Similarity=0.036 Sum_probs=127.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEE-cCCCCCCCchhh-HhHhhh---cCCcEEEEccCCCHH----------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQ-LLDHFK---NLGVNFVVGDVLNHE---------- 68 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~---------- 68 (310)
.++++||||+|+||+++++.|+++|++|++++ |+ +.+.. ..+.+. ...+.++.+|++|.+
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC-----HHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 36899999999999999999999999999999 87 32221 223332 346889999999998
Q ss_pred -------HHHHHhc-------CCCEEEEcccchh---------------------------------hhhHHHHHHHHH-
Q 021596 69 -------SLVNAIK-------QVDVVISTVGHAL---------------------------------LADQVKIIAAIK- 100 (310)
Q Consensus 69 -------~~~~~~~-------~~d~Vi~~a~~~~---------------------------------~~~~~~~~~aa~- 100 (310)
++.++++ ++|++||+||... +.++..+++++.
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8887776 7999999998531 222334445543
Q ss_pred ---HcCC-----ccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccc
Q 021596 101 ---EAGN-----VTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPN 164 (310)
Q Consensus 101 ---~~~~-----v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~ 164 (310)
+.+. ..++|+ |+.... ...+....|+.+|...+.+.+. .++++..++||++...+ .
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~- 235 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTN------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D- 235 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTT------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-
T ss_pred HHHhcCCCCCCCCcEEEEEechhhc------CCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-
Confidence 3220 256776 443322 1123467899999999877753 47899999999887654 2
Q ss_pred cCCCCCCCCCCCeEEEecCCCcee-EeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 165 LLQPGAAAPPRDKVVILGDGNPKA-VYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+... . ... ........ .+..++|+|++++.++.+.. ..|+.+++.|
T Consensus 236 ~~~~----~-~~~---~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 284 (291)
T 1e7w_A 236 MPPA----V-WEG---HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 284 (291)
T ss_dssp SCHH----H-HHH---HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCHH----H-HHH---HHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence 1000 0 000 00000111 36789999999999996532 2466666653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.4e-14 Score=121.14 Aligned_cols=187 Identities=13% Similarity=0.118 Sum_probs=119.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC----CCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|+||+++++.|+++|++|+++.|.... .+..+. ...+.+...+.. +.+|+.|.+++.++++
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999998664210 002222 222334333333 3579999876665543
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... ..++.++.+++ ++.+ ..++|+ ||..... ..+.
T Consensus 88 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~------~~~~ 160 (319)
T 1gz6_A 88 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY------GNFG 160 (319)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH------CCTT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc------CCCC
Confidence 6999999998532 33334444444 5556 678877 5532211 0123
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .|+++..++||.+ .++.... . +.....+++++|+|.++
T Consensus 161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~-------~----------~~~~~~~~~p~dvA~~~ 222 (319)
T 1gz6_A 161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV-------M----------PEDLVEALKPEYVAPLV 222 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG-------S----------CHHHHHHSCGGGTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc-------C----------ChhhhccCCHHHHHHHH
Confidence 57899999999877753 4789999999876 3221110 0 01112457899999999
Q ss_pred HHHhcCCcc-CCceEEE
Q 021596 201 IKAVDDPRT-LNKNLYI 216 (310)
Q Consensus 201 ~~~l~~~~~-~~~~~~~ 216 (310)
+.++..+.. .|+.+++
T Consensus 223 ~~l~s~~~~~tG~~~~v 239 (319)
T 1gz6_A 223 LWLCHESCEENGGLFEV 239 (319)
T ss_dssp HHHTSTTCCCCSCEEEE
T ss_pred HHHhCchhhcCCCEEEE
Confidence 999876532 3455544
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=117.53 Aligned_cols=196 Identities=14% Similarity=0.142 Sum_probs=129.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~--~~d~ 79 (310)
.|+++||||++.||+.+++.|.++|.+|.+..|+.. + +..+.+.. ..+..+.+|++|+++++++++ ++|+
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~-----~-~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP-----D-ETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC-----H-HHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH-----H-HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 478999999999999999999999999999999732 1 12233333 357889999999998888876 6999
Q ss_pred EEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 80 VISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 80 Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
++|+||... +.++ +.++..+.+.++-.++|. ||.... ...|....|+.+|
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------~g~~~~~~Y~asK 156 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------QGGIRVPSYTAAK 156 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SCCSSCHHHHHHH
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------CCCCCChHHHHHH
Confidence 999998754 3333 344444444442357776 443222 1223467899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
..+..+.+. .|+++..|.||++.......+.... .... .+...-....+-.++|+|.+++.++.+..
T Consensus 157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~----~~~~--~~~~~~PlgR~g~peeiA~~v~fLaSd~a 230 (247)
T 4hp8_A 157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA----ARNK--AILERIPAGRWGHSEDIAGAAVFLSSAAA 230 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH----HHHH--HHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH----HHHH--HHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence 999877753 5899999999998765433221100 0000 00000111246678999999999886532
Q ss_pred --cCCceEEEc
Q 021596 209 --TLNKNLYIQ 217 (310)
Q Consensus 209 --~~~~~~~~~ 217 (310)
--|+.+.+-
T Consensus 231 ~~iTG~~i~VD 241 (247)
T 4hp8_A 231 DYVHGAILNVD 241 (247)
T ss_dssp TTCCSCEEEES
T ss_pred cCCcCCeEEEC
Confidence 236666664
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=119.81 Aligned_cols=200 Identities=16% Similarity=0.147 Sum_probs=125.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
|.++||||++.||+.+++.|+++|.+|.++.|+ .++.+ ..+++ ...+..+++|++|.++++++++ +
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~-----~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRR-----KDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999998 33332 22333 4568889999999999888775 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+|+++++||... +.++..+.+++...= +-.++|. ||.... ...|....|+.+|
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~------~~~~~~~~Y~asK 177 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS------TGTPAFSVYAASK 177 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG------SCCTTCHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc------cCCCCchHHHHHH
Confidence 899999998654 444455555554320 0123554 332221 1233467899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
..+..+.+. .|+++..|.||.+.......+..... ..... ...+...-....+..++|+|.+++.++.+.
T Consensus 178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~ 255 (273)
T 4fgs_A 178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDP--VQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDD 255 (273)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CH--HHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCc--hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999887764 57889999999886654322211000 00000 000000000123667899999999988653
Q ss_pred c--cCCceEEEcC
Q 021596 208 R--TLNKNLYIQP 218 (310)
Q Consensus 208 ~--~~~~~~~~~~ 218 (310)
. --|+.+.+-|
T Consensus 256 a~~iTG~~i~VDG 268 (273)
T 4fgs_A 256 SSFVTGAELFVDG 268 (273)
T ss_dssp GTTCCSCEEEEST
T ss_pred hcCccCCeEeECc
Confidence 2 2466676654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6e-15 Score=122.31 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=121.6
Q ss_pred CceEEEEccCcchhHHHHHHHHh---CCCCEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK---AGHPTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++++||||+|+||+++++.|++ +|++|++++|+. .+.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE-----SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH-----HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCH-----HHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHH
Confidence 47899999999999999999999 899999999983 2222 222332 2347889999999998887764
Q ss_pred ---------CCC--EEEEcccch----------h------------hhhHHHHHHHHHHcC-----CccEEcc-CCCCCC
Q 021596 76 ---------QVD--VVISTVGHA----------L------------LADQVKIIAAIKEAG-----NVTRFFP-SEFGND 116 (310)
Q Consensus 76 ---------~~d--~Vi~~a~~~----------~------------~~~~~~~~~aa~~~~-----~v~~~v~-s~~~~~ 116 (310)
++| ++||+||.. . +.++.++++++...- ...++|+ ||....
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 358 999999852 1 344556677765431 1346776 543322
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEee
Q 021596 117 VDRAHGAVEPAKSVYYDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYN 191 (310)
Q Consensus 117 ~~~~~~~~~~~~~~y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 191 (310)
...+....|+.+|...+.+.+. .++++..+.||++...+........ ........+........+.
T Consensus 161 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~ 231 (259)
T 1oaa_A 161 ------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS---KDPELRSKLQKLKSDGALV 231 (259)
T ss_dssp ------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC---SCHHHHHHHHHHHHTTCSB
T ss_pred ------CCCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhcc---CChhHHHHHHHhhhcCCcC
Confidence 1123467899999999888764 2467778888887665432211000 0000000000000012467
Q ss_pred ccchHHHHHHHHhcCC
Q 021596 192 KEDDIATYTIKAVDDP 207 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~~ 207 (310)
+++|+|++++.++.+.
T Consensus 232 ~p~dvA~~v~~l~~~~ 247 (259)
T 1oaa_A 232 DCGTSAQKLLGLLQKD 247 (259)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhhc
Confidence 8999999999988643
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.3e-14 Score=126.10 Aligned_cols=184 Identities=15% Similarity=0.177 Sum_probs=129.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~------ 75 (310)
++++||||+|.||.+++++|.++|+ .|+++.|+.... +...+..+.+... .+.++.+|++|.+++.++++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA-PGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh-HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 7899999999999999999999998 678888874432 2233344455444 47889999999999999987
Q ss_pred CCCEEEEcccch-h-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 QVDVVISTVGHA-L-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 ~~d~Vi~~a~~~-~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
++|+|||+||.. . +.++.++.+++...+ ..+||+ ||.... -..+....|+.+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~------~g~~g~~~YaAa 391 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAV------WGSGGQPGYAAA 391 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHH------TTCTTCHHHHHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhc------CCCCCcHHHHHH
Confidence 479999999975 2 566788888888877 778776 442211 112346789999
Q ss_pred HHHHHHHHH---HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 135 KARIRRAVE---AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 135 K~~~e~~l~---~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
|...+.+.+ ..|++++.|.||.+.+.....-.. . ... +. ......+..++.+.++..++..+
T Consensus 392 Ka~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~-----~-~~~--l~---~~g~~~l~pe~~~~~l~~~l~~~ 456 (496)
T 3mje_A 392 NAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPE-----V-HDR--LV---RQGVLAMEPEHALGALDQMLEND 456 (496)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECEESSSCC------------CHH--HH---HTTEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCeEEEEECCcccCCccccChH-----H-HHH--HH---hcCCCCCCHHHHHHHHHHHHcCC
Confidence 999887765 479999999999886543211000 0 000 00 11235678889999999888755
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-13 Score=112.17 Aligned_cols=193 Identities=13% Similarity=0.117 Sum_probs=117.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEE-E--cCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHH-Hh---c
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVL-V--RESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVN-AI---K 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~-~--R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~-~~---~ 75 (310)
+++++||||+|+||+++++.|+++|++|+++ . |+ +++.+.. +.+ .+..+. |..+.+.+.+ +. .
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~-----~~~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD-----AAERQRFESEN--PGTIAL--AEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS-----HHHHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC-----HHHHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999 5 87 3333211 222 233332 5555443333 22 2
Q ss_pred CCCEEEEcccch-----h-----------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 QVDVVISTVGHA-----L-----------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ~~d~Vi~~a~~~-----~-----------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||.. . +.++.++++++ ++.+ ..++|+ ||..... ..+..
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------~~~~~ 144 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKK------PLAYN 144 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS------CCTTC
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCC------CCCCc
Confidence 689999999842 1 33344455544 3555 577777 5533221 12345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccc---cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFL---PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
..|+.+|...+.+.+. .++++..++||++...+. ....... . .... .........+..++|+|+
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~---~-~~~~--~~~~~p~~r~~~pe~vA~ 218 (244)
T 1zmo_A 145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNP---E-LRER--VDRDVPLGRLGRPDEMGA 218 (244)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCH---H-HHHH--HHHHCTTCSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchH---H-HHHH--HhcCCCCCCCcCHHHHHH
Confidence 7899999999887753 478999999998876643 2110000 0 0000 000000124678999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.+.. ..|+.+.+.|
T Consensus 219 ~v~~l~s~~~~~~tG~~i~vdg 240 (244)
T 1zmo_A 219 LITFLASRRAAPIVGQFFAFTG 240 (244)
T ss_dssp HHHHHHTTTTGGGTTCEEEEST
T ss_pred HHHHHcCccccCccCCEEEeCC
Confidence 9999987542 2466666653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-13 Score=113.82 Aligned_cols=199 Identities=13% Similarity=0.074 Sum_probs=128.3
Q ss_pred CceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCch--hhHhHhhhcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK--SQLLDHFKNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++|||| +|+||+++++.|+++|++|+++.|+. .+ ....+.+ ...+.++.+|++|.+++.++++
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-----LRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC-----HHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh-----HHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 368999999 99999999999999999999999983 22 1111222 3357889999999999988876
Q ss_pred ------CCCEEEEcccchh------------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCC
Q 021596 76 ------QVDVVISTVGHAL------------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~ 123 (310)
++|++||+|+... +.++.++++++...- +-.++|+ |+.+..
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~------- 153 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR------- 153 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-------
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-------
Confidence 7899999998421 344456667765431 0136666 443321
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCC------e-EEEecCCCcee-
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRD------K-VVILGDGNPKA- 188 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~- 188 (310)
..+....|+.+|...+.+.+. .++++..++||.+............ .... . ...+.......
T Consensus 154 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~r 230 (269)
T 2h7i_A 154 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGA---LGEEAGAQIQLLEEGWDQRAPIGW 230 (269)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTT---TCHHHHHHHHHHHHHHHHHCTTCC
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccccc---chhhHHHHHHHHHHhhhccCCccc
Confidence 123467899999999877653 4899999999998765432211000 0000 0 00000000011
Q ss_pred EeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 189 VYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.+..++|+|++++.++.+.. ..|+.+.+.|
T Consensus 231 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 231 NMKDATPVAKTVCALLSDWLPATTGDIIYADG 262 (269)
T ss_dssp CTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred CCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence 36778999999999996532 2456666643
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.6e-13 Score=111.06 Aligned_cols=196 Identities=15% Similarity=0.147 Sum_probs=125.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~ 77 (310)
|+++||||++.||+++++.|+++|++|.++.|+.... ......+++|++|.++++++++ ++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 79 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQRLGGV 79 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999999984321 1234578999999998887765 68
Q ss_pred CEEEEcccchh-------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 78 DVVISTVGHAL-------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
|+++|+||... ...++.++..+++.+ -.++|. ||..... +.......|
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~-----~~~~~~~~Y 153 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVL-----PLPESTTAY 153 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-----CCTTTCHHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhcc-----CCCCccHHH
Confidence 99999998532 223345555556666 467776 4432211 112235789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCC----CCCCCCCC-Ce-EEEecCCCceeEeeccchHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQ----PGAAAPPR-DK-VVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~----~~~~~~~~-~~-~~~~~~~~~~~~~i~~~D~a~ 198 (310)
+.+|..++.+.+. .|+++..|.||++.......+.. ........ .. .......-....+..++|+|.
T Consensus 154 ~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~ 233 (261)
T 4h15_A 154 AAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVAN 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 9999999877653 58999999999987653221110 00000000 00 000000001124677899999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.+.. --|+.+.+-|
T Consensus 234 ~v~fLaS~~a~~itG~~i~VDG 255 (261)
T 4h15_A 234 LIAFLASDRAASITGAEYTIDG 255 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCccCcEEEECC
Confidence 9999886432 2466777754
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.50 E-value=3e-13 Score=97.85 Aligned_cols=95 Identities=23% Similarity=0.225 Sum_probs=81.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|+|+|+|+ |++|+.+++.|.+.| ++|+++.|+ +.+. +.+...++..+.+|+.+.+++.++++++|+||+
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~-----~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHD-----LAAL---AVLNRMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESC-----HHHH---HHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-----HHHH---HHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 579999999 999999999999999 999999998 4444 333456889999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
+++.. ...+++++|.+.| ++++..+
T Consensus 76 ~~~~~---~~~~~~~~~~~~g-~~~~~~~ 100 (118)
T 3ic5_A 76 AAPFF---LTPIIAKAAKAAG-AHYFDLT 100 (118)
T ss_dssp CSCGG---GHHHHHHHHHHTT-CEEECCC
T ss_pred CCCch---hhHHHHHHHHHhC-CCEEEec
Confidence 99754 4688999999998 8877654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-12 Score=118.85 Aligned_cols=185 Identities=10% Similarity=0.034 Sum_probs=124.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEE-EcCCCC----------CCCchhhHhHhhhc--CCcEEEEccCCCHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVL-VRESTL----------SAPSKSQLLDHFKN--LGVNFVVGDVLNHES 69 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~-~R~~~~----------~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~ 69 (310)
.++++||||+|.||.+++++|.++|++ |+++ .|+... . +...+..+.+.. ..+.++.+|++|.++
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAED-SGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC----------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccC-HHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 478999999999999999999999988 5555 677432 1 122233344433 347889999999999
Q ss_pred HHHHhcC------CCEEEEcccchh-------------------hhhHHHHHHHHHHcCC----ccEEcc-CCCCCCccc
Q 021596 70 LVNAIKQ------VDVVISTVGHAL-------------------LADQVKIIAAIKEAGN----VTRFFP-SEFGNDVDR 119 (310)
Q Consensus 70 ~~~~~~~------~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~----v~~~v~-s~~~~~~~~ 119 (310)
+.++++. +|+|||+||... +.++.++.+++..... ..+||+ ||.....
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~-- 407 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW-- 407 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT--
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC--
Confidence 9999874 699999999643 5667788888876531 346665 5433221
Q ss_pred cCCCCCCcchhhHHHHHHHHHHHHH---cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 120 AHGAVEPAKSVYYDVKARIRRAVEA---EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 120 ~~~~~~~~~~~y~~~K~~~e~~l~~---~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..+....|+.+|...+.+.+. .|++++.|.||.+...+... . .....+- ......+.++++
T Consensus 408 ----g~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~---~------~~~~~~~---~~g~~~l~pee~ 471 (525)
T 3qp9_A 408 ----GGAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTE---G------ATGERLR---RLGLRPLAPATA 471 (525)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGS---S------HHHHHHH---HTTBCCBCHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccc---h------hhHHHHH---hcCCCCCCHHHH
Confidence 123467899999999888754 57899999999884432210 0 0000000 111345788999
Q ss_pred HHHHHHHhcCC
Q 021596 197 ATYTIKAVDDP 207 (310)
Q Consensus 197 a~~~~~~l~~~ 207 (310)
++++..++..+
T Consensus 472 a~~l~~~l~~~ 482 (525)
T 3qp9_A 472 LTALDTALGHG 482 (525)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhCC
Confidence 99999988755
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.35 E-value=2e-12 Score=119.62 Aligned_cols=217 Identities=12% Similarity=0.056 Sum_probs=131.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC-----CCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL-----SAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.++++||||+|.||+++++.|+++|++|++++|+... .........+++...+.. +.+|+.|.+++.++++
T Consensus 19 gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC---
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999883210 001122233444444433 3479999888777766
Q ss_pred ----CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +.++.++.+++ ++.+ ..++|. ||..... ..+.
T Consensus 98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~------~~~~ 170 (613)
T 3oml_A 98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIY------GNFG 170 (613)
T ss_dssp -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHH------CCTT
T ss_pred HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC------CCCC
Confidence 5899999999653 34445555555 5555 567776 5432211 1223
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|...+.+.+. .++++..+.|+..... . .. .. +........++|+|.++
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~-~----~~----~~---------~~~~~~~~~pedvA~~v 232 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRM-T----EG----IL---------PDILFNELKPKLIAPVV 232 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------CC----CC---------CHHHHTTCCGGGTHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChh-h----hh----cc---------chhhhhcCCHHHHHHHH
Confidence 57899999999877753 4788889999854211 1 10 00 01112345889999999
Q ss_pred HHHhcCCcc-CCceEEEcCC-------------------CCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 201 IKAVDDPRT-LNKNLYIQPP-------------------GNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 201 ~~~l~~~~~-~~~~~~~~~~-------------------~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+.++.+... .|+.+++.|+ +...+..++.+.+.++.+.......-.
T Consensus 233 ~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~~~~~~~ 298 (613)
T 3oml_A 233 AYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAKHLGA 298 (613)
T ss_dssp HHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTTCBCCSS
T ss_pred HHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccccCcCCCC
Confidence 998865421 2344433211 224688888888888887765333333
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=105.71 Aligned_cols=203 Identities=10% Similarity=0.037 Sum_probs=115.0
Q ss_pred CceEEEEccC--cchhHHHHHHHHhCCCCEEEEEcCCCC------CCCchhhHhHhhhcCC----cEEEEcc--------
Q 021596 4 KSKILSIGGT--GYIGKFIVEASVKAGHPTFVLVRESTL------SAPSKSQLLDHFKNLG----VNFVVGD-------- 63 (310)
Q Consensus 4 ~~~IlI~Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~~~~~~~l~~~~----~~~v~~D-------- 63 (310)
.++++||||+ |+||+++++.|+++|++|+++.|+... .+..+.+..+.+...+ ...+.+|
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhh
Confidence 3689999999 999999999999999999999864100 0000111111221111 2333333
Q ss_pred CC----C--------HHHHHHHhc-------CCCEEEEcccch----h-----------------hhhHHHHHHHHHHcC
Q 021596 64 VL----N--------HESLVNAIK-------QVDVVISTVGHA----L-----------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 64 ~~----d--------~~~~~~~~~-------~~d~Vi~~a~~~----~-----------------~~~~~~~~~aa~~~~ 103 (310)
+. | .+++.++++ ++|++||+||.. . +.++.++++++...=
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 167 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 22 1 233443332 689999999742 1 445667777776541
Q ss_pred -CccEEcc-CCCCCCccccCCCCCCcc-hhhHHHHHHHHHHHH--------HcCCCEEEEecceeccccccccCCCCCCC
Q 021596 104 -NVTRFFP-SEFGNDVDRAHGAVEPAK-SVYYDVKARIRRAVE--------AEGIPYTYVESYCFDGYFLPNLLQPGAAA 172 (310)
Q Consensus 104 -~v~~~v~-s~~~~~~~~~~~~~~~~~-~~y~~~K~~~e~~l~--------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~ 172 (310)
+-.++|+ |+..... + .|.. ..|+.+|...+.+.+ ..|+++..++||.+...........
T Consensus 168 ~~~g~iv~isS~~~~~-----~-~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~---- 237 (297)
T 1d7o_A 168 NPGGASISLTYIASER-----I-IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI---- 237 (297)
T ss_dssp EEEEEEEEEECGGGTS-----C-CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH----
T ss_pred ccCceEEEEecccccc-----C-CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc----
Confidence 0136665 4432211 1 1223 579999999887654 1589999999998877643221000
Q ss_pred CCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 173 PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
...............+.+++|+|++++.++.+.. ..|+.+++.|
T Consensus 238 --~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg 283 (297)
T 1d7o_A 238 --DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283 (297)
T ss_dssp --HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred --HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 0000000000011245789999999999886432 2466677753
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=105.15 Aligned_cols=207 Identities=11% Similarity=0.068 Sum_probs=98.4
Q ss_pred ceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCC-------CCCCCchh------------hHhHhhhcCC-----cE
Q 021596 5 SKILSIGG--TGYIGKFIVEASVKAGHPTFVLVRES-------TLSAPSKS------------QLLDHFKNLG-----VN 58 (310)
Q Consensus 5 ~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~-------~~~~~~~~------------~~~~~l~~~~-----~~ 58 (310)
++++|||| +|+||+++++.|+++|++|+++.|+. ... ..+. ...+++...+ ..
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLE-SSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK 88 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------CCSE
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhh-hhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence 68999999 89999999999999999999998742 000 0010 0111121111 34
Q ss_pred EEEccC------------CC--------HHHHHHHhc-------CCCEEEEcccch----h-----------------hh
Q 021596 59 FVVGDV------------LN--------HESLVNAIK-------QVDVVISTVGHA----L-----------------LA 90 (310)
Q Consensus 59 ~v~~D~------------~d--------~~~~~~~~~-------~~d~Vi~~a~~~----~-----------------~~ 90 (310)
++.+|+ +| .+++.++++ ++|++||+||.. . +.
T Consensus 89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~ 168 (319)
T 2ptg_A 89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY 168 (319)
T ss_dssp EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence 555443 11 223443333 689999999742 1 44
Q ss_pred hHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcc-hhhHHHHHHHHHHHH-------H-cCCCEEEEecceecc
Q 021596 91 DQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAK-SVYYDVKARIRRAVE-------A-EGIPYTYVESYCFDG 159 (310)
Q Consensus 91 ~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~-~~y~~~K~~~e~~l~-------~-~~~~~~i~rp~~~~~ 159 (310)
++.++++++...= +-.++|+ |+..... ..|.. ..|+.+|..++.+.+ . .|+++..++||++..
T Consensus 169 g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T 242 (319)
T 2ptg_A 169 SFVSLLQHFLPLMKEGGSALALSYIASEK------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS 242 (319)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred HHHHHHHHHHHHHhcCceEEEEecccccc------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence 4556777766531 0135665 3332211 11223 479999998876653 1 589999999999877
Q ss_pred ccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC--ccCCceEEEcC
Q 021596 160 YFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~~~~ 218 (310)
.+............................+..++|+|++++.++.+. ...|+.+.+.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG 303 (319)
T 2ptg_A 243 RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN 303 (319)
T ss_dssp ------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence 543321100000000000000000011124678999999999988653 22466666654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.9e-10 Score=103.92 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=128.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccC-CCHHHHHH-H---hcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDV-LNHESLVN-A---IKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~-~d~~~~~~-~---~~~~ 77 (310)
+.++||||++.||..+++.|.++|++|++..|+. . ....+++...+ +..+.+|+ .+.+.+.+ + +.++
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~----~--~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i 396 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD----A--TKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI 396 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC----C--HHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc----H--HHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999887641 1 12233443333 45566787 55544322 2 3369
Q ss_pred CEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 78 DVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 78 d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
|++||+||... +.+ ++.++..+++.+ -.++|. ||.... ...+....|+.
T Consensus 397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~------~~~~~~~~Y~a 469 (604)
T 2et6_A 397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGI------YGNFGQANYSS 469 (604)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHH------SCCTTBHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc------cCCCCChhHHH
Confidence 99999999643 223 344445555554 457776 442211 11234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|..+..+.+. .|+++..|.||. ...+.... . . +.......++|+|.+++.++.+
T Consensus 470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~-------~-~---------~~~~~~~~pe~vA~~v~~L~s~ 531 (604)
T 2et6_A 470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI-------M-R---------EQDKNLYHADQVAPLLVYLGTD 531 (604)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------------CCSSCGGGTHHHHHHTTST
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc-------C-c---------hhhccCCCHHHHHHHHHHHhCC
Confidence 99998877653 588899999984 22211100 0 0 0011345789999999988854
Q ss_pred Cc-cCCceEEEcCC----------------CCccCHHHHHHHHHHHhCCCc
Q 021596 207 PR-TLNKNLYIQPP----------------GNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 207 ~~-~~~~~~~~~~~----------------~~~~s~~e~~~~~~~~~g~~~ 240 (310)
.. ..|+.+.+.|. ...++..++.+.+.+....+.
T Consensus 532 ~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 582 (604)
T 2et6_A 532 DVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT 582 (604)
T ss_dssp TCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred ccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence 32 24455554432 235788999999988887653
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=9.5e-12 Score=105.96 Aligned_cols=205 Identities=10% Similarity=0.046 Sum_probs=114.1
Q ss_pred ceEEEEcc--CcchhHHHHHHHHhCCCCEEEEEcCCC------CCCCchhhHhHhhhcCC----cEEEEccC--------
Q 021596 5 SKILSIGG--TGYIGKFIVEASVKAGHPTFVLVREST------LSAPSKSQLLDHFKNLG----VNFVVGDV-------- 64 (310)
Q Consensus 5 ~~IlI~Ga--tG~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~~~~~~l~~~~----~~~v~~D~-------- 64 (310)
++++|||| +|+||+++++.|+++|++|+++.|+.. ..+..+......+...+ +.++.+|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV 89 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence 68999999 899999999999999999999987520 00000111112221111 24554443
Q ss_pred ----CC--------HHHHHHHhc-------CCCEEEEcccch----h-----------------hhhHHHHHHHHHHcC-
Q 021596 65 ----LN--------HESLVNAIK-------QVDVVISTVGHA----L-----------------LADQVKIIAAIKEAG- 103 (310)
Q Consensus 65 ----~d--------~~~~~~~~~-------~~d~Vi~~a~~~----~-----------------~~~~~~~~~aa~~~~- 103 (310)
+| .+++.++++ ++|++||+||.. . +.++.++++++...=
T Consensus 90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 169 (315)
T 2o2s_A 90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN 169 (315)
T ss_dssp CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 21 334444333 689999999843 1 344556666665430
Q ss_pred CccEEcc-CCCCCCccccCCCCCCcc-hhhHHHHHHHHHHHH--------HcCCCEEEEecceeccccccccCCCCCCCC
Q 021596 104 NVTRFFP-SEFGNDVDRAHGAVEPAK-SVYYDVKARIRRAVE--------AEGIPYTYVESYCFDGYFLPNLLQPGAAAP 173 (310)
Q Consensus 104 ~v~~~v~-s~~~~~~~~~~~~~~~~~-~~y~~~K~~~e~~l~--------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~ 173 (310)
+-.++|+ |+..... + .|.. ..|+.+|...+.+.+ ..|+++..++||++...+........ .
T Consensus 170 ~~g~Iv~isS~~~~~-----~-~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~---~ 240 (315)
T 2o2s_A 170 EGGSAVTLSYLAAER-----V-VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG---E 240 (315)
T ss_dssp EEEEEEEEEEGGGTS-----C-CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS---S
T ss_pred cCCEEEEEecccccc-----c-CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc---c
Confidence 0135665 3322111 1 1223 479999999877663 25899999999998765432211100 0
Q ss_pred CC--CeE-EEecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 174 PR--DKV-VILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 174 ~~--~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
.. ... ...........+..++|+|++++.++.+.. ..|+.+.+.|
T Consensus 241 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 290 (315)
T 2o2s_A 241 KSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN 290 (315)
T ss_dssp SCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred chhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence 00 000 000000011235688999999999886432 2456666643
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.21 E-value=4.3e-11 Score=102.51 Aligned_cols=154 Identities=8% Similarity=0.027 Sum_probs=96.9
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCC----CCCchhhHhHhh------hcCCcEEEEccCCCH--H-
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTL----SAPSKSQLLDHF------KNLGVNFVVGDVLNH--E- 68 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~~~l------~~~~~~~v~~D~~d~--~- 68 (310)
.++++||||++ .||.++++.|+++|++|++.+|+... .+.++....... ....+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 47899999875 99999999999999999977765200 000000000110 012257788888776 5
Q ss_pred -----------------HHHHHhc-------CCCEEEEcccch---h------------------hhhHHHHHHHHHHcC
Q 021596 69 -----------------SLVNAIK-------QVDVVISTVGHA---L------------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 69 -----------------~~~~~~~-------~~d~Vi~~a~~~---~------------------~~~~~~~~~aa~~~~ 103 (310)
++.++++ ++|++||+||.. . +.++..+.+++...=
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5555544 589999999852 1 444555666665431
Q ss_pred -CccEEcc-CCCCCCccccCCCCCCcch-hhHHHHHHHHHHHH-------H-cCCCEEEEecceecccccc
Q 021596 104 -NVTRFFP-SEFGNDVDRAHGAVEPAKS-VYYDVKARIRRAVE-------A-EGIPYTYVESYCFDGYFLP 163 (310)
Q Consensus 104 -~v~~~v~-s~~~~~~~~~~~~~~~~~~-~y~~~K~~~e~~l~-------~-~~~~~~i~rp~~~~~~~~~ 163 (310)
.-.++|+ ||.... ...|... .|+.+|+..+.+.+ . .++++..+.||++...+..
T Consensus 162 ~~~g~Iv~isS~~~~------~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~ 226 (329)
T 3lt0_A 162 KPQSSIISLTYHASQ------KVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT 226 (329)
T ss_dssp EEEEEEEEEECGGGT------SCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_pred hhCCeEEEEeCcccc------CCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHh
Confidence 0125665 443221 1122343 89999999877654 3 5899999999999876543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-10 Score=111.08 Aligned_cols=147 Identities=16% Similarity=0.274 Sum_probs=108.4
Q ss_pred CceEEEEccCcchhHHHHHHHH-hCCCC-EEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASV-KAGHP-TFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~-~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||+|.||..++++|. ++|.+ |++++|+.... +...+..+++...+ +.++.+|++|.+++.++++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA-SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 4789999999999999999999 79985 88899985433 33334455565544 6788999999999999887
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+|||+|+... +.++.++.+++. .. . +||. ||..... ..+....|+.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~-l-~iV~~SS~ag~~------g~~g~~~YaA 679 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PD-V-ALVLFSSVSGVL------GSGGQGNYAA 679 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TT-S-EEEEEEETHHHH------TCSSCHHHHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hC-C-EEEEEccHHhcC------CCCCCHHHHH
Confidence 3699999998753 566777877772 22 5 5655 5432211 1234678999
Q ss_pred HHHHHHHHHH---HcCCCEEEEecceeccc
Q 021596 134 VKARIRRAVE---AEGIPYTYVESYCFDGY 160 (310)
Q Consensus 134 ~K~~~e~~l~---~~~~~~~i~rp~~~~~~ 160 (310)
+|...+.+.+ ..|++++.+.||.+.+.
T Consensus 680 aka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 680 ANSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 9987766554 47999999999987654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.8e-10 Score=104.83 Aligned_cols=209 Identities=13% Similarity=0.103 Sum_probs=124.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC----CCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHH-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL----SAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNA----- 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~----- 73 (310)
.+.++||||++.||+.+++.|.++|++|++..|+... .+..+. ...+++...+.+. .+|+.|.++++++
T Consensus 8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999998876410 001222 2234444334332 2466555332222
Q ss_pred --hcCCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 74 --IKQVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 74 --~~~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
+.++|++||+||... +.+ ++.++..+++.+ -.++|. ||..... ..+.
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~------~~~~ 159 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLY------GNFG 159 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH------CCTT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC------CCCC
Confidence 336999999999642 223 344555555555 457776 4422111 1234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|..+..+.+. .|+++..|.|+. ...+.... . . ........++|+|.++
T Consensus 160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T~m~~~~-------~-~---------~~~~~~~~pe~vA~~v 221 (604)
T 2et6_A 160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMTESI-------M-P---------PPMLEKLGPEKVAPLV 221 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCHHHHTT-------S-C---------HHHHTTCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cCcccccc-------C-C---------hhhhccCCHHHHHHHH
Confidence 57899999998877653 578888999963 22111100 0 0 0001235789999999
Q ss_pred HHHhcCCcc-CCceEEEcC-----------------CCCccCHHHHHHHHHHHhCC
Q 021596 201 IKAVDDPRT-LNKNLYIQP-----------------PGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 201 ~~~l~~~~~-~~~~~~~~~-----------------~~~~~s~~e~~~~~~~~~g~ 238 (310)
+.++..... .|+.+.+.| .++..+..++.+.+.+....
T Consensus 222 ~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 277 (604)
T 2et6_A 222 LYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY 277 (604)
T ss_dssp HHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred HHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence 998865422 244444432 22357889999988887643
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.7e-10 Score=83.21 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=76.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
|++|+|+|+ |.+|+++++.|.++|++|+++.++ +++. +.+...++.++.+|..|++.+.++ ++++|+|+.
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~-----~~~~---~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKS-----KEKI---ELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESC-----HHHH---HHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHH---HHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 678999996 999999999999999999999998 4443 444456889999999999998876 458999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++.. .....+...+++.+ ..+++.
T Consensus 77 ~~~~~--~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 77 TGSDD--EFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CCSCH--HHHHHHHHHHHHHC-CCCEEE
T ss_pred ecCCH--HHHHHHHHHHHHhC-CceEEE
Confidence 98843 44556777788877 666655
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=9e-10 Score=107.47 Aligned_cols=180 Identities=11% Similarity=0.064 Sum_probs=110.3
Q ss_pred ceEEEEccCcc-hhHHHHHHHHhCCCCEEEEE-cCCCCCCCchhhHhHhh----h--cCCcEEEEccCCCHHHHHHHhc-
Q 021596 5 SKILSIGGTGY-IGKFIVEASVKAGHPTFVLV-RESTLSAPSKSQLLDHF----K--NLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 5 ~~IlI~GatG~-iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~~~~l----~--~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
++++||||+|. ||.++++.|+++|++|++++ |+.... . ...+.+ . ...+.++.+|++|.+++.++++
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l-e---e~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-T---DYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT-T---THHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH-H---HHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 68999999998 99999999999999999884 543222 1 112222 1 1246789999999999888764
Q ss_pred ------------CCCEEEEcccchh----------------------hhhHHHHHHHHHHcCC-----ccEEcc-CCCCC
Q 021596 76 ------------QVDVVISTVGHAL----------------------LADQVKIIAAIKEAGN-----VTRFFP-SEFGN 115 (310)
Q Consensus 76 ------------~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~~~-----v~~~v~-s~~~~ 115 (310)
++|++||+||... +.+...++++++.... -.++|+ ||...
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 4899999998531 2233455566532110 146666 44322
Q ss_pred CccccCCCCCCcchhhHHHHHHHHHHHHH-----cC--CCEEEEecceec-cccccccCCCCCCCCCCCeEEEecCCCce
Q 021596 116 DVDRAHGAVEPAKSVYYDVKARIRRAVEA-----EG--IPYTYVESYCFD-GYFLPNLLQPGAAAPPRDKVVILGDGNPK 187 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-----~~--~~~~i~rp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (310)
.. + ....|+.+|+..+.++.. .+ +++..+.||++. ..+.... .. .... . ....
T Consensus 633 ~~-----G---g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~----~~~~-l-----~~ip 693 (1688)
T 2pff_A 633 TF-----G---GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI----IAEG-I-----EKMG 693 (1688)
T ss_dssp TS-----S---CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TT----CSTT-T-----SSSS
T ss_pred cc-----C---CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hH----HHHH-H-----HhCC
Confidence 11 1 246899999999998432 12 444555677665 2322110 00 0000 0 0011
Q ss_pred eEeeccchHHHHHHHHhcCC
Q 021596 188 AVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 188 ~~~i~~~D~a~~~~~~l~~~ 207 (310)
..+..++|+|.+++.++...
T Consensus 694 lR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 694 VRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp CCCCCCCTTHHHHHHHTSTT
T ss_pred CCCCCHHHHHHHHHHHhCCC
Confidence 13457899999999988765
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4e-09 Score=90.83 Aligned_cols=189 Identities=15% Similarity=0.068 Sum_probs=117.3
Q ss_pred CceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCCCCCc--------hhhHhHhhhc--CCcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPS--------KSQLLDHFKN--LGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~--------~~~~~~~l~~--~~~~~v~~D~~d~~~~~~ 72 (310)
.++++||||++.||.++++.|.+ .|.+|.++.|+....... .....+.+.. ..+..+.+|++|.+++.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 126 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL 126 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 57899999999999999999999 999999999875432111 0111122222 346788999999998887
Q ss_pred Hhc-------CCCEEEEcccch---------------------------------------h------------hhh--H
Q 021596 73 AIK-------QVDVVISTVGHA---------------------------------------L------------LAD--Q 92 (310)
Q Consensus 73 ~~~-------~~d~Vi~~a~~~---------------------------------------~------------~~~--~ 92 (310)
+++ ++|+++|+||.. . +.+ .
T Consensus 127 ~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~ 206 (405)
T 3zu3_A 127 TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED 206 (405)
T ss_dssp HHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence 765 589999998752 1 111 1
Q ss_pred H-HHHHHHHHcCC---ccEEcc-CCCCCCccccCCCCCCcc--hhhHHHHHHHHHHHHH-------c-CCCEEEEeccee
Q 021596 93 V-KIIAAIKEAGN---VTRFFP-SEFGNDVDRAHGAVEPAK--SVYYDVKARIRRAVEA-------E-GIPYTYVESYCF 157 (310)
Q Consensus 93 ~-~~~~aa~~~~~---v~~~v~-s~~~~~~~~~~~~~~~~~--~~y~~~K~~~e~~l~~-------~-~~~~~i~rp~~~ 157 (310)
. .+++++...+- -.++|. ||.+.... .|.. ..|+.+|..++.+.+. . |+++..+.||.+
T Consensus 207 ~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i 280 (405)
T 3zu3_A 207 WQMWIDALLDAGVLAEGAQTTAFTYLGEKIT------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV 280 (405)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHhhhhCCcEEEEEeCchhhCc------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCC
Confidence 1 33444433220 124554 55443211 1223 7899999999877653 5 889999999988
Q ss_pred ccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 158 DGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
............. . ..... .....+-..+|+++++..++.+
T Consensus 281 ~T~~s~~ip~~p~----y--~~~l~--~~mkr~G~~Ed~a~~i~~L~sd 321 (405)
T 3zu3_A 281 VSQASSAIPMMPL----Y--LSLLF--KVMKEKGTHEGCIEQVYSLYKD 321 (405)
T ss_dssp CCHHHHTSTTHHH----H--HHHHH--HHHHHHTCCCCHHHHHHHHHHH
T ss_pred cCchhhcCCCCcH----H--HHHHH--HHHhcCCCcHHHHHHHHHHHhc
Confidence 7653221110000 0 00000 0122455678999999999865
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=81.55 Aligned_cols=96 Identities=18% Similarity=0.330 Sum_probs=75.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
|++|+|+|+ |.+|+.+++.|.+.|++|+++.|+ +.+. +.+...+...+.+|..+.+.+.++ +.++|+|++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~-----~~~~---~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKV---NAYASYATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHH---HTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 568999997 999999999999999999999997 3333 333344677888999999888876 778999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++... .....+...+++.+ +++++.
T Consensus 77 ~~~~~~-~~~~~~~~~~~~~~-~~~ii~ 102 (144)
T 2hmt_A 77 AIGANI-QASTLTTLLLKELD-IPNIWV 102 (144)
T ss_dssp CCCSCH-HHHHHHHHHHHHTT-CSEEEE
T ss_pred CCCCch-HHHHHHHHHHHHcC-CCeEEE
Confidence 998641 23446777888887 677665
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.00 E-value=6.8e-09 Score=78.46 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=75.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
.++|+|+|+ |.+|+.+++.|.+.|++|+++.|+. +++.+.+......++.++.+|..|++.+.++ ++++|+|+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 468999995 9999999999999999999999972 1222223333356799999999999999887 889999999
Q ss_pred cccchhhhhHHHHHHHHHHc-CCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEA-GNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~-~~v~~~v~ 110 (310)
+.+.. .....+...+++. + ..+++.
T Consensus 78 ~~~~d--~~n~~~~~~a~~~~~-~~~ii~ 103 (153)
T 1id1_A 78 LSDND--ADNAFVVLSAKDMSS-DVKTVL 103 (153)
T ss_dssp CSSCH--HHHHHHHHHHHHHTS-SSCEEE
T ss_pred ecCCh--HHHHHHHHHHHHHCC-CCEEEE
Confidence 98865 3445566677776 4 555554
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=7.4e-09 Score=90.56 Aligned_cols=190 Identities=12% Similarity=0.021 Sum_probs=116.4
Q ss_pred CceEEEEccCcchhHH--HHHHHHhCCCCEEEEEcCCCCCCCc--------hhhHhHhhh--cCCcEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKF--IVEASVKAGHPTFVLVRESTLSAPS--------KSQLLDHFK--NLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~--l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~l~--~~~~~~v~~D~~d~~~~~ 71 (310)
.++++||||++.||.+ ++..|.++|++|+++.|+....... .....+... ...+..+.+|+.|.++++
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~ 139 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD 139 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence 5789999999999999 9999999999999999986543110 111112222 234788999999999888
Q ss_pred HHhc-------CCCEEEEcccch------------------------------------------h---------hhh--
Q 021596 72 NAIK-------QVDVVISTVGHA------------------------------------------L---------LAD-- 91 (310)
Q Consensus 72 ~~~~-------~~d~Vi~~a~~~------------------------------------------~---------~~~-- 91 (310)
++++ ++|++||+||.. . +..
T Consensus 140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~ 219 (418)
T 4eue_A 140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE 219 (418)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence 7765 589999998863 0 000
Q ss_pred H-HHHHHHHHHcCC---ccEEcc-CCCCCCccccCCCCCCcc--hhhHHHHHHHHHHHH-------H-cCCCEEEEecce
Q 021596 92 Q-VKIIAAIKEAGN---VTRFFP-SEFGNDVDRAHGAVEPAK--SVYYDVKARIRRAVE-------A-EGIPYTYVESYC 156 (310)
Q Consensus 92 ~-~~~~~aa~~~~~---v~~~v~-s~~~~~~~~~~~~~~~~~--~~y~~~K~~~e~~l~-------~-~~~~~~i~rp~~ 156 (310)
. ..+++++...+- -.++|. |+.+.... .|.. ..|+.+|..++.+.+ . .|+++..+.||.
T Consensus 220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~ 293 (418)
T 4eue_A 220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPRT------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKA 293 (418)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred HHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC------CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCc
Confidence 1 133444443320 123444 55443211 2223 789999999887654 3 589999999998
Q ss_pred eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 157 FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
+.......+..... . ..... ......-..+|+++++..++.+.
T Consensus 294 v~T~~s~~ip~~p~----y--~~~~~--~~mk~~G~~E~v~e~~~~L~sd~ 336 (418)
T 4eue_A 294 LVTKASAYIPTFPL----Y--AAILY--KVMKEKNIHENCIMQIERMFSEK 336 (418)
T ss_dssp CCCHHHHTSTTHHH----H--HHHHH--HHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CcChhhhcCCCCcH----H--HHHHH--HHHhhcCChHHHHHHHHHHhhcc
Confidence 87653222110000 0 00000 00112344689999999988654
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.99 E-value=9.6e-09 Score=89.27 Aligned_cols=189 Identities=16% Similarity=0.111 Sum_probs=116.5
Q ss_pred CceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCCCCCch---------hhHhHhhhc--CCcEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSK---------SQLLDHFKN--LGVNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~---------~~~~~~l~~--~~~~~v~~D~~d~~~~~ 71 (310)
.+++|||||++.||.++++.|.+ .|.+|.++.|+.... ..+ ....+.+.. ..+..+.+|++|.++++
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~-~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGT-ASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCC-SSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhh-hhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 47899999999999999999999 999999999986543 111 011122233 34778899999998877
Q ss_pred HHhc--------CCCEEEEcccch----------------------------------------h-----------hhh-
Q 021596 72 NAIK--------QVDVVISTVGHA----------------------------------------L-----------LAD- 91 (310)
Q Consensus 72 ~~~~--------~~d~Vi~~a~~~----------------------------------------~-----------~~~- 91 (310)
++++ ++|+++|+||.. . +..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 6653 479999998751 0 011
Q ss_pred -H-HHHHHHHHHcCC---ccEEcc-CCCCCCccccCCCCCCcc--hhhHHHHHHHHHHHHH-------cCCCEEEEecce
Q 021596 92 -Q-VKIIAAIKEAGN---VTRFFP-SEFGNDVDRAHGAVEPAK--SVYYDVKARIRRAVEA-------EGIPYTYVESYC 156 (310)
Q Consensus 92 -~-~~~~~aa~~~~~---v~~~v~-s~~~~~~~~~~~~~~~~~--~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~ 156 (310)
. ..+++++....- -.++|. ||.+.... .|.. ..|+.+|..++.+.+. .|+++..+.||.
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~ 293 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEIT------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKS 293 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc------CCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCC
Confidence 1 134444443320 124554 44433211 1223 6899999999887653 589999999998
Q ss_pred eccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 157 FDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
+.......+.... . ...... ......-..+|+++++..++.+.
T Consensus 294 i~T~~~~~ip~~~-----~-~~~~~~--~~m~r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 294 VVTQASAAIPVMP-----L-YISMVY--KIMKEKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp CCCTTGGGSTHHH-----H-HHHHHH--HHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CcChhhhcCCCCh-----H-HHHHHH--hhhcCCcChHHHHHHHHHHhcch
Confidence 8765432211000 0 000000 01123344689999999988653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.7e-09 Score=93.72 Aligned_cols=100 Identities=21% Similarity=0.272 Sum_probs=78.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHh-Hhhhc---CCcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLL-DHFKN---LGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|++|+|+|| |++|+.+++.|+++|. +|.+.+|+ .++.+.+ +.+.. ..+..+.+|+.|.+++.+++++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~-----~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRT-----LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESC-----HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECC-----HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 569999998 9999999999999983 89999998 4444322 23332 3588999999999999999986
Q ss_pred --CCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCCC
Q 021596 77 --VDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEF 113 (310)
Q Consensus 77 --~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~ 113 (310)
+|+|||++++. ....++++|.+.| +..+..+.+
T Consensus 75 ~~~DvVin~ag~~---~~~~v~~a~l~~g-~~vvD~a~~ 109 (405)
T 4ina_A 75 VKPQIVLNIALPY---QDLTIMEACLRTG-VPYLDTANY 109 (405)
T ss_dssp HCCSEEEECSCGG---GHHHHHHHHHHHT-CCEEESSCC
T ss_pred hCCCEEEECCCcc---cChHHHHHHHHhC-CCEEEecCC
Confidence 99999999865 3578899999998 655534444
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.8e-09 Score=94.70 Aligned_cols=97 Identities=22% Similarity=0.285 Sum_probs=72.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+ +++|+|+| +|++|+++++.|++.|++|+++.|+ +++...+... ..++..+.+|+.|.+++.++++++|+|
T Consensus 1 M~-~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~-----~~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l~~~DvV 72 (450)
T 1ff9_A 1 MA-TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLV 72 (450)
T ss_dssp -C-CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESS-----HHHHHHTTTT-CTTEEEEECCTTCHHHHHHHHTTSSEE
T ss_pred CC-CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECC-----HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHcCCcEE
Confidence 54 57899998 8999999999999999999999998 3333211110 124778899999999999999999999
Q ss_pred EEcccchh---------------------hhhHHHHHHHHHHcCCcc
Q 021596 81 ISTVGHAL---------------------LADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 81 i~~a~~~~---------------------~~~~~~~~~aa~~~~~v~ 106 (310)
||+++... .....+++++|+++| ++
T Consensus 73 In~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~ 118 (450)
T 1ff9_A 73 ISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT 118 (450)
T ss_dssp EECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE
T ss_pred EECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce
Confidence 99998642 123566777777777 54
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.1e-09 Score=91.43 Aligned_cols=93 Identities=18% Similarity=0.185 Sum_probs=75.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|||+|+|| |++|+.+++.|.+ .++|.+.+|+ ..+. +.+ ...+..+..|+.|.+++.++++++|+||++
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~-----~~~~---~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVN-----NENL---EKV-KEFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESC-----HHHH---HHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcC-----HHHH---HHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 589999997 9999999998865 5889999988 3333 222 346778899999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+++. ....++++|.++| .+++-.+
T Consensus 85 ~p~~---~~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 85 LPGF---LGFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp CCGG---GHHHHHHHHHHHT--CEEEECC
T ss_pred cCCc---ccchHHHHHHhcC--cceEeee
Confidence 9976 3678999999998 4666533
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.6e-09 Score=77.10 Aligned_cols=95 Identities=17% Similarity=0.249 Sum_probs=73.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHH-hcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNA-IKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi 81 (310)
.|+|+|+|+ |++|+.+++.|.+.|++|+++.|+ +++. +.+. ..++.++.+|..+.+.+.++ ++++|+|+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~-----~~~~---~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDIC---KKASAEIDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHH---HHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 479999985 999999999999999999999997 4333 2232 23778889999998888765 67899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++++... ....+.+.++..+ ..++|.
T Consensus 75 ~~~~~~~--~~~~~~~~~~~~~-~~~ii~ 100 (140)
T 1lss_A 75 AVTGKEE--VNLMSSLLAKSYG-INKTIA 100 (140)
T ss_dssp ECCSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred EeeCCch--HHHHHHHHHHHcC-CCEEEE
Confidence 9987652 3345667777777 666665
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-08 Score=102.30 Aligned_cols=189 Identities=10% Similarity=0.046 Sum_probs=115.4
Q ss_pred CceEEEEccCcc-hhHHHHHHHHhCCCCEEEEE-cCCCCCCCchh-hHhHhh----h--cCCcEEEEccCCCHHHHHHHh
Q 021596 4 KSKILSIGGTGY-IGKFIVEASVKAGHPTFVLV-RESTLSAPSKS-QLLDHF----K--NLGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 4 ~~~IlI~GatG~-iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~-~~~~~l----~--~~~~~~v~~D~~d~~~~~~~~ 74 (310)
.++++||||+|. ||.++++.|+++|++|++++ |+ ..+. ...+.+ . ...+.++.+|++|.+++.+++
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~-----~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF-----SKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 368999999998 99999999999999999885 54 2222 112222 1 234788999999999988876
Q ss_pred c-------------CCCEEEEcccchh----------------------hhhHHHHHHHHHHcCC-----ccEEcc-CCC
Q 021596 75 K-------------QVDVVISTVGHAL----------------------LADQVKIIAAIKEAGN-----VTRFFP-SEF 113 (310)
Q Consensus 75 ~-------------~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~~~-----v~~~v~-s~~ 113 (310)
+ ++|++||+||... +.+...++++++.... -.++|. |+.
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ 829 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 829 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence 4 4899999998531 2223345555533221 146665 443
Q ss_pred CCCccccCCCCCCcchhhHHHHHHHHHH-HHH----c--CCCEEEEecceec-cccccccCCCCCCCCCCCeEEEecCCC
Q 021596 114 GNDVDRAHGAVEPAKSVYYDVKARIRRA-VEA----E--GIPYTYVESYCFD-GYFLPNLLQPGAAAPPRDKVVILGDGN 185 (310)
Q Consensus 114 ~~~~~~~~~~~~~~~~~y~~~K~~~e~~-l~~----~--~~~~~i~rp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (310)
.... + ....|+.+|...+.+ .+. . .+++..+.||++. ..+.... . ..... .. .
T Consensus 830 ag~~-----g---g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~-----~~~~~---~~--~ 890 (1887)
T 2uv8_A 830 HGTF-----G---GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-N-----IIAEG---IE--K 890 (1887)
T ss_dssp TTCS-----S---CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-C-----TTHHH---HH--T
T ss_pred Hhcc-----C---CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-h-----hHHHH---HH--h
Confidence 2211 1 246899999999887 221 2 2677788898886 3332210 0 00000 00 0
Q ss_pred ceeEeeccchHHHHHHHHhcCC-c--cCCceEEE
Q 021596 186 PKAVYNKEDDIATYTIKAVDDP-R--TLNKNLYI 216 (310)
Q Consensus 186 ~~~~~i~~~D~a~~~~~~l~~~-~--~~~~~~~~ 216 (310)
....+..++|+|.+++.++... . ..|..+.+
T Consensus 891 ~plr~~sPEEVA~avlfLaSd~~as~iTGq~I~V 924 (1887)
T 2uv8_A 891 MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 924 (1887)
T ss_dssp TSCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred cCCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 1113457899999999888654 1 13455665
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=106.92 Aligned_cols=149 Identities=14% Similarity=0.143 Sum_probs=104.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~----- 75 (310)
.++++||||+|.||..++++|+++|.+ |++++|+.... +......+.+...+ +.++.+|++|.+++.++++
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT-GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS-HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch-HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 478999999999999999999999987 77788885432 11122334444334 6678899999999888765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+|||+|+... +.++.++.+++...- ...+||. ||.... ...+....|+.
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~------~g~~g~~~Y~a 2036 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCG------RGNAGQANYGF 2036 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHH------TTCTTCHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhc------CCCCCcHHHHH
Confidence 5899999998643 566777777776531 1356766 553221 11234678999
Q ss_pred HHHHHHHHHH---HcCCCEEEEecceecc
Q 021596 134 VKARIRRAVE---AEGIPYTYVESYCFDG 159 (310)
Q Consensus 134 ~K~~~e~~l~---~~~~~~~i~rp~~~~~ 159 (310)
+|...+.+.+ ..|++...+..+.+.+
T Consensus 2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2037 ANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 9999988776 4688888887766654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-08 Score=100.82 Aligned_cols=206 Identities=9% Similarity=0.052 Sum_probs=121.5
Q ss_pred CceEEEEccCcc-hhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHh----Hhhh--cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGY-IGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLL----DHFK--NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~-iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~----~~l~--~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++++||||+|. ||.++++.|+++|++|++++++. ..+. ... ..+. ...+.++.+|++|.+++.++++
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~----~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF----SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC----hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 368999999999 99999999999999999886542 2221 111 2222 2347889999999999988764
Q ss_pred -----------CCCEEEEcccchh----------------------hhhHHHHHHHHHHcCC-----ccEEcc-CCCCCC
Q 021596 76 -----------QVDVVISTVGHAL----------------------LADQVKIIAAIKEAGN-----VTRFFP-SEFGND 116 (310)
Q Consensus 76 -----------~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~~~-----v~~~v~-s~~~~~ 116 (310)
++|++||+||... +.+..+++++++.... -.+||+ |+....
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence 4899999998531 1222344444221110 246665 443221
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceec-cccccccCCCCCCCCCCCeEEEecCCCcee
Q 021596 117 VDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFD-GYFLPNLLQPGAAAPPRDKVVILGDGNPKA 188 (310)
Q Consensus 117 ~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (310)
. + ....|+.+|...+.+.+. ..+++..+.||++. ..+.... .. . .. ... ....
T Consensus 808 ~-----g---g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~----~-~~---~~~--~~pl 868 (1878)
T 2uv9_A 808 F-----G---NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NL----V-AE---GVE--KLGV 868 (1878)
T ss_dssp S-----S---CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HH----T-HH---HHH--TTTC
T ss_pred c-----C---CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hh----h-HH---HHH--hcCC
Confidence 1 1 245799999999877542 13677788888876 4322110 00 0 00 000 0011
Q ss_pred EeeccchHHHHHHHHhcCCc---cCCceEEEc--CC-CCccCHHHHHHHH
Q 021596 189 VYNKEDDIATYTIKAVDDPR---TLNKNLYIQ--PP-GNIYSFNDLVSLW 232 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~---~~~~~~~~~--~~-~~~~s~~e~~~~~ 232 (310)
.+..++|+|.+++.++.... ..|..+.+. |. .....+.++...+
T Consensus 869 r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 869 RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 34488999999988885432 135666652 22 1123455555444
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.88 E-value=9.3e-09 Score=87.52 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=70.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+|+|+|+||+|++|+.++..|+++| ++|++++++. .+. ....+...... .+.+ +.+.+++.++++++|+|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~-----~~~-~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN-----APG-VTADISHMDTGAVVRG-FLGQQQLEAALTGMDLI 80 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS-----HHH-HHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC-----cHh-HHHHhhcccccceEEE-EeCCCCHHHHcCCCCEE
Confidence 5799999999999999999999998 7899988773 211 11223222211 1222 33456788899999999
Q ss_pred EEcccchh-------------hhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
||+++... ...++++++++.+.+ .+.+|+
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~vi 122 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVN 122 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEE
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99998543 467888999999987 555444
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.7e-08 Score=75.29 Aligned_cols=95 Identities=19% Similarity=0.294 Sum_probs=73.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHH-hcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNA-IKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi 81 (310)
.++|+|+| .|.+|+.+++.|.+.|++|+++.|+ +++. +.+. ..+..++.+|..+.+.+.++ ++++|+||
T Consensus 19 ~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~-----~~~~---~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 19 SKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKN-----EYAF---HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----GGGG---GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHH---HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 47899999 5999999999999999999999998 4333 3333 45778888999998888766 67899999
Q ss_pred EcccchhhhhHHHHHHHHHH-cCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKE-AGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~-~~~v~~~v~ 110 (310)
.+++... ....+.+.++. .+ ..+++.
T Consensus 90 ~~~~~~~--~~~~~~~~~~~~~~-~~~iv~ 116 (155)
T 2g1u_A 90 AFTNDDS--TNFFISMNARYMFN-VENVIA 116 (155)
T ss_dssp ECSSCHH--HHHHHHHHHHHTSC-CSEEEE
T ss_pred EEeCCcH--HHHHHHHHHHHHCC-CCeEEE
Confidence 9998643 44556667776 45 566665
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=4.5e-09 Score=88.07 Aligned_cols=79 Identities=20% Similarity=0.249 Sum_probs=64.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++++||||+|.+|++++..|++.|++|+++.|+ .++.+ ..+.+.. .++.++.+|+.|.+++.++++++|+||
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~-----~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 3789999999999999999999999999999998 33332 2222222 357788899999999999999999999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
|+++..
T Consensus 194 n~ag~g 199 (287)
T 1lu9_A 194 TAGAIG 199 (287)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999753
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.7e-08 Score=89.79 Aligned_cols=89 Identities=18% Similarity=0.292 Sum_probs=68.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+++|+|+|+ |++|+.+++.|++. |++|++++|+ +++.+.+.. ..++..+.+|+.|.+++.++++++|+||+
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~-----~~ka~~la~--~~~~~~~~~D~~d~~~l~~~l~~~DvVIn 94 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT-----LANAQALAK--PSGSKAISLDVTDDSALDKVLADNDVVIS 94 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS-----HHHHHHHHG--GGTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC-----HHHHHHHHH--hcCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence 578999997 99999999999998 6899999998 444432221 13677889999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++... ...+.++|.+.+
T Consensus 95 ~tp~~~---~~~v~~a~l~~g 112 (467)
T 2axq_A 95 LIPYTF---HPNVVKSAIRTK 112 (467)
T ss_dssp CSCGGG---HHHHHHHHHHHT
T ss_pred CCchhh---hHHHHHHHHhcC
Confidence 998753 223455555554
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-07 Score=69.90 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=72.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
+++|+|+| .|.+|+.+++.|.+.|++|+++.++ +++. +.+...++.++.+|..+++.+.++ ++++|+|+.
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~-----~~~~---~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETS-----RTRV---DELRERGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESC-----HHHH---HHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECC-----HHHH---HHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 46899999 5999999999999999999999998 4444 444557899999999999998876 568999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+.+... ....++..+++.....++|
T Consensus 78 ~~~~~~--~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 78 TIPNGY--EAGEIVASARAKNPDIEII 102 (140)
T ss_dssp CCSCHH--HHHHHHHHHHHHCSSSEEE
T ss_pred ECCChH--HHHHHHHHHHHHCCCCeEE
Confidence 988653 3334555566553133444
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.73 E-value=9.5e-09 Score=87.64 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=69.1
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHH
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~ 71 (310)
|++ +|||+||||+|++|++++..|+..|. +|++++++.... ..+. .....+.+....+ ..|+...+++.
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~-~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~ 78 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKA-QKALQGVMMEIDDCAFPL-LAGMTAHADPM 78 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHH-HHHHHHHHHHHHTTTCTT-EEEEEEESSHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccc-cccchhhHHHHhhhcccc-cCcEEEecCcH
Confidence 544 57999999999999999999999885 688877651000 0011 1112233321111 23554445677
Q ss_pred HHhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcCCcc-EEcc
Q 021596 72 NAIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
++++++|+|||+++... ...++++++++.+.++.+ +++.
T Consensus 79 ~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~ 131 (329)
T 1b8p_A 79 TAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLV 131 (329)
T ss_dssp HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 88999999999998543 456788999999873133 5554
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.2e-07 Score=76.08 Aligned_cols=95 Identities=19% Similarity=0.281 Sum_probs=74.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
|+|+|+|+ |.+|+++++.|.+.|++|+++.++ +++.+.+. ...++.++.+|.+|.+.+.++ ++++|+|+.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~l~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKD-----RELCEEFA--KKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHH--HHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHH--HHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 68999995 999999999999999999999998 44442211 235789999999999999887 6789999998
Q ss_pred ccchhhhhHHHHHHHHHH-cCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKE-AGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~-~~~v~~~v~ 110 (310)
.+... ....+...+++ .+ ..++|.
T Consensus 73 ~~~d~--~n~~~~~~a~~~~~-~~~iia 97 (218)
T 3l4b_C 73 TPRDE--VNLFIAQLVMKDFG-VKRVVS 97 (218)
T ss_dssp CSCHH--HHHHHHHHHHHTSC-CCEEEE
T ss_pred cCCcH--HHHHHHHHHHHHcC-CCeEEE
Confidence 88653 34445566665 46 677765
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.69 E-value=9.9e-08 Score=74.27 Aligned_cols=95 Identities=14% Similarity=0.230 Sum_probs=74.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH--hcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA--IKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~--~~~~d~Vi 81 (310)
++|+|+| .|.+|+.+++.|.+. |++|+++.|+ +++. +.+...++.++.+|..+.+.+.++ ++++|+|+
T Consensus 40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~-----~~~~---~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIR-----EEAA---QQHRSEGRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESC-----HHHH---HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECC-----HHHH---HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 5899998 699999999999999 9999999998 4444 334456888999999999988887 77999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.+.. .....++..++..+...+++.
T Consensus 111 ~~~~~~--~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 111 LAMPHH--QGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp ECCSSH--HHHHHHHHHHHHTTCCSEEEE
T ss_pred EeCCCh--HHHHHHHHHHHHHCCCCEEEE
Confidence 988764 344556677777663445544
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=75.80 Aligned_cols=93 Identities=16% Similarity=0.204 Sum_probs=73.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++.|+ +++. +.+. .++.++.+|.+|++.+.++ ++++|.|+.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~-----~~~~---~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRK---KVLR-SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCG-----GGHH---HHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECC-----HHHH---HHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 478999996 9999999999999999 9999988 4443 3344 6899999999999999887 789999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCcc-EEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
+.+.. .....+...|++.+ .+ ++|.
T Consensus 78 ~~~~d--~~n~~~~~~a~~~~-~~~~iia 103 (234)
T 2aef_A 78 DLESD--SETIHCILGIRKID-ESVRIIA 103 (234)
T ss_dssp CCSCH--HHHHHHHHHHHHHC-SSSEEEE
T ss_pred cCCCc--HHHHHHHHHHHHHC-CCCeEEE
Confidence 88764 34455667777776 54 5554
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.4e-07 Score=78.40 Aligned_cols=97 Identities=23% Similarity=0.193 Sum_probs=64.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC--CEEEEEc--CCCCCCCchhhH-hHhhhc------CCcEEEEccCCCHHHHHHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH--PTFVLVR--ESTLSAPSKSQL-LDHFKN------LGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~~~~~ 73 (310)
|||+||||+|++|++++..|+..|. +++++++ + ..+.+. ...+.+ ..+.+...+ +++.++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a 71 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS-----INKLEGLREDIYDALAGTRSDANIYVES----DENLRI 71 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG-----HHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCc-----hhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence 5899999999999999999999884 4777776 4 221211 111111 122332221 235567
Q ss_pred hcCCCEEEEcccchh-------------hhhHHHHHHHHHHcCCccEEccC
Q 021596 74 IKQVDVVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 74 ~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
++++|+|||+|+... ...++++++++++.+ -..++.+
T Consensus 72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~ 121 (313)
T 1hye_A 72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI 121 (313)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEe
Confidence 899999999998543 667789999999986 3344433
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.44 E-value=5e-07 Score=72.04 Aligned_cols=74 Identities=24% Similarity=0.398 Sum_probs=54.9
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.|+|+|||| ||.+|.++++.|+++|++|+++.|..+.. + ..+.++.++ |+.+.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~--------~~~~~~~~~--~v~s~ 71 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P--------EPHPNLSIR--EITNT 71 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C--------CCCTTEEEE--ECCSH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c--------cCCCCeEEE--EHhHH
Confidence 589999999 99999999999999999999999985322 1 002355554 44555
Q ss_pred HHHHH----HhcCCCEEEEcccchh
Q 021596 68 ESLVN----AIKQVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~~----~~~~~d~Vi~~a~~~~ 88 (310)
+++.+ .+.++|++|++|+...
T Consensus 72 ~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 72 KDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHHHhcCCCCEEEEcCcccc
Confidence 44443 4457999999998654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.42 E-value=9.5e-07 Score=74.30 Aligned_cols=93 Identities=13% Similarity=0.064 Sum_probs=63.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC--CEEEEEc--CCCCCCCchhhH-hHhhhc-----CCcEEEEccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH--PTFVLVR--ESTLSAPSKSQL-LDHFKN-----LGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~~~~~~ 74 (310)
|||+||||+|++|++++..|+..|. +++++++ + +.+.+. ...+.+ ..+.+... + .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-----EDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-----HHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCC-----hhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHh
Confidence 6899999999999999999998885 5777776 4 222211 112211 23343332 2 3458
Q ss_pred cCCCEEEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc
Q 021596 75 KQVDVVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++|+|||+++... ...++++++++++.+ .+.+++
T Consensus 69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~vi 116 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISL 116 (303)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEE
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEE
Confidence 89999999998653 457888999999987 555544
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.3e-06 Score=74.57 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=59.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
|+++|+|+|.||||.+|+.+++.|++++| +++++....+ ..+. +.-.+..+...|. +++ .++++
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~---~g~~-----~~~~g~~i~~~~~-~~~----~~~~~ 69 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES---AGQR-----MGFAESSLRVGDV-DSF----DFSSV 69 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT---TTCE-----EEETTEEEECEEG-GGC----CGGGC
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCC---CCCc-----cccCCcceEEecC-CHH----HhcCC
Confidence 55457999999999999999999997765 4565543211 1010 0011222211222 222 25689
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
|+||.++|.. .+..++.++.+.| ++.+..|+
T Consensus 70 DvV~~a~g~~---~s~~~a~~~~~aG-~kvId~Sa 100 (340)
T 2hjs_A 70 GLAFFAAAAE---VSRAHAERARAAG-CSVIDLSG 100 (340)
T ss_dssp SEEEECSCHH---HHHHHHHHHHHTT-CEEEETTC
T ss_pred CEEEEcCCcH---HHHHHHHHHHHCC-CEEEEeCC
Confidence 9999999854 4677888888888 77665553
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.7e-06 Score=74.61 Aligned_cols=89 Identities=18% Similarity=0.365 Sum_probs=74.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
.++|+|+| .|.+|+.+++.|.+.|++|+++.++ +++. +.+...++.++.+|.++++.+.++ ++++|+||.
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d-----~~~v---~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHD-----PDHI---ETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECC-----HHHH---HHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHH---HHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 47899999 5999999999999999999999998 5444 445567899999999999999988 778999999
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+.+.. .....++..+++.+
T Consensus 75 ~~~~~--~~n~~i~~~ar~~~ 93 (413)
T 3l9w_A 75 AIDDP--QTNLQLTEMVKEHF 93 (413)
T ss_dssp CCSSH--HHHHHHHHHHHHHC
T ss_pred CCCCh--HHHHHHHHHHHHhC
Confidence 98864 45666777777766
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=6.4e-06 Score=87.29 Aligned_cols=83 Identities=8% Similarity=0.092 Sum_probs=61.8
Q ss_pred CceEEEEccCcc-hhHHHHHHHHhCCCCEEEEEcCCCCCCCc-hhhHhHhhhcCC--cEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGY-IGKFIVEASVKAGHPTFVLVRESTLSAPS-KSQLLDHFKNLG--VNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~-iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~---- 75 (310)
.++++||||++. ||.++++.|++.|.+|++++|+....... .....+.+...+ +..+.+|++|.++++++++
T Consensus 2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~ 2215 (3089)
T 3zen_D 2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGT 2215 (3089)
T ss_dssp CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTS
T ss_pred CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence 478999999999 99999999999999999999984320000 111223333333 5678999999999887743
Q ss_pred -------CCCEEEEcccc
Q 021596 76 -------QVDVVISTVGH 86 (310)
Q Consensus 76 -------~~d~Vi~~a~~ 86 (310)
++|++||+||.
T Consensus 2216 ~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2216 EQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp CCEEEESSSEEEECCCCC
T ss_pred hhhhhcCCCCEEEECCCc
Confidence 47999999996
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=3.5e-06 Score=66.99 Aligned_cols=72 Identities=21% Similarity=0.234 Sum_probs=54.8
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++|+|||| ||.+|.++++.|.++|++|+++.|+.... . +.++. ..|+.+.
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----------~-~~g~~--~~dv~~~ 74 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFVK--RVDVMTA 74 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTEE--EEECCSH
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----------c-CCCCe--EEccCcH
Confidence 478999999 69999999999999999999998874211 0 22343 4678887
Q ss_pred HHHHHH----hcCCCEEEEcccchh
Q 021596 68 ESLVNA----IKQVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~~~----~~~~d~Vi~~a~~~~ 88 (310)
+++.++ +.++|++|++|+...
T Consensus 75 ~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 75 LEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHHhcCCCCEEEECCcccC
Confidence 666554 347999999999754
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.3e-06 Score=73.18 Aligned_cols=95 Identities=13% Similarity=0.101 Sum_probs=59.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-----C-CEEEEEcCCCCCCCchhhH-hHhhhc-CCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-----H-PTFVLVRESTLSAPSKSQL-LDHFKN-LGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-----~-~V~~~~R~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|++|+|+||||.+|+.+++.|++++ + +++.+.++.+.. .+... ...+.. ..+.+ .|+ +.+ .+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~ag--k~~~~~~~~l~~~~~~~~--~~~-~~~----~~~ 79 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAG--STLGEHHPHLTPLAHRVV--EPT-EAA----VLG 79 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTT--SBGGGTCTTCGGGTTCBC--EEC-CHH----HHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCC--Cchhhhcccccccceeee--ccC-CHH----Hhc
Confidence 5799999999999999999999987 3 677776542211 11100 000111 12222 222 333 356
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
++|+||.+++.. .+..+++++ +.| ++.+..|+
T Consensus 80 ~~DvVf~alg~~---~s~~~~~~~-~~G-~~vIDlSa 111 (352)
T 2nqt_A 80 GHDAVFLALPHG---HSAVLAQQL-SPE-TLIIDCGA 111 (352)
T ss_dssp TCSEEEECCTTS---CCHHHHHHS-CTT-SEEEECSS
T ss_pred CCCEEEECCCCc---chHHHHHHH-hCC-CEEEEECC
Confidence 899999999865 366777788 777 65554443
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=98.21 E-value=3.1e-06 Score=72.39 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=73.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
++|+|+|+ |.+|+.+++.|.++|+ |+++.++ +++. + +...++.++.+|.+|++.++++ ++++|.|+.+
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~-----~~~~---~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRK---K-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCG-----GGHH---H-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCC-----hhhh---h-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 58999995 9999999999999999 9999888 5454 3 4457899999999999999988 7799999998
Q ss_pred ccchhhhhHHHHHHHHHHcCCcc-EEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
.+.. .....+...+++.+ .+ +++.
T Consensus 185 ~~~d--~~n~~~~~~ar~~~-~~~~iia 209 (336)
T 1lnq_A 185 LESD--SETIHCILGIRKID-ESVRIIA 209 (336)
T ss_dssp CSSH--HHHHHHHHHHHTTC-TTSEEEE
T ss_pred CCcc--HHHHHHHHHHHHHC-CCCeEEE
Confidence 8754 44556667777776 43 4443
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=5.3e-06 Score=70.07 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=62.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC---HHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN---HESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~~~~~~~~~d~ 79 (310)
|||+|+||+|++|+.++..|+..| ++|++++++. .......+.+.... +++.. .++++++++++|+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~------~~~~a~dL~~~~~~---~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH------TPGVAADLSHIETR---ATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS------HHHHHHHHTTSSSS---CEEEEEESGGGHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc------cHHHHHHHhccCcC---ceEEEecCCCCHHHHhCCCCE
Confidence 589999999999999999999988 6899999983 11122233322111 11211 2456778999999
Q ss_pred EEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 80 VISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
||++++... ....+.+++++.+..
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 108 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC 108 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999998653 244666777777764
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.17 E-value=6.6e-06 Score=70.32 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=59.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|++|++|+|.||||.+|+.+++.|.++.. +++++.+..+.. .+.. ....+. +.. ...+.+.+ + +.++|
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g--~~~~~~~~~~~--g~~--~~~~~~~~---~-~~~vD 70 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG--EPVHFVHPNLR--GRT--NLKFVPPE---K-LEPAD 70 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT--SBGGGTCGGGT--TTC--CCBCBCGG---G-CCCCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC--chhHHhCchhc--Ccc--cccccchh---H-hcCCC
Confidence 66678999999999999999999998764 787777643221 1110 000011 110 11122333 2 47899
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+||.+++.. .+..++.++.+.| ++.+-.|+
T Consensus 71 vV~~a~g~~---~s~~~a~~~~~aG-~~VId~Sa 100 (345)
T 2ozp_A 71 ILVLALPHG---VFAREFDRYSALA-PVLVDLSA 100 (345)
T ss_dssp EEEECCCTT---HHHHTHHHHHTTC-SEEEECSS
T ss_pred EEEEcCCcH---HHHHHHHHHHHCC-CEEEEcCc
Confidence 999999865 4667777778888 65444454
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=2.2e-06 Score=72.85 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=62.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--C-----EEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--P-----TFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~-----V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.++|+||||+|+||++++..|+..|. + +++++++... .+. .....+.+....+. .++...+...++++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~---~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMM---GVLDGVLMELQDCALPLL-KDVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGH---HHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCcc---ccchhhHhhhHhhhhccc-CCEEEcCCcHHHhC
Confidence 57999999999999999999998874 5 8888886210 011 11122333221111 12211223456688
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|+||+++|... ....+++++++++.+
T Consensus 79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~ 119 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA 119 (333)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999998642 556788899998886
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-05 Score=69.08 Aligned_cols=83 Identities=18% Similarity=0.186 Sum_probs=62.9
Q ss_pred CceEEEEccCcchhHHHHHHHH-hCCCCEEEEEcCCCCCCCch---------hhHhHhhh--cCCcEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASV-KAGHPTFVLVRESTLSAPSK---------SQLLDHFK--NLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~---------~~~~~~l~--~~~~~~v~~D~~d~~~~~ 71 (310)
.|++|||||++.+|.+.+..|. ..|..|.++.|..... ..+ ....+..+ ...+..+.+|+.|.++++
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~-~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGS-ETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCC-SSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCccc-ccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 5899999999999999999887 6788999998876543 111 01112222 234788999999999888
Q ss_pred HHhc-------CCCEEEEcccch
Q 021596 72 NAIK-------QVDVVISTVGHA 87 (310)
Q Consensus 72 ~~~~-------~~d~Vi~~a~~~ 87 (310)
++++ ++|+++|.++..
T Consensus 129 ~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHhcCCCCEEEEecccc
Confidence 8776 689999999864
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=8.9e-07 Score=70.51 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=51.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|+|+||+|++|+.+++.|++.|++|+++.|+ +++.+.+.......+. ..|+. .+++.++++++|+||+++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 589999999999999999999999999999998 3333222111000000 01121 124556677899999999
Q ss_pred cchh
Q 021596 85 GHAL 88 (310)
Q Consensus 85 ~~~~ 88 (310)
+...
T Consensus 73 ~~~~ 76 (212)
T 1jay_A 73 PWEH 76 (212)
T ss_dssp CHHH
T ss_pred Chhh
Confidence 8653
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=71.69 Aligned_cols=95 Identities=13% Similarity=0.234 Sum_probs=72.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-cCCcEEEEccCCCHHHHHHH-hcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-NLGVNFVVGDVLNHESLVNA-IKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi 81 (310)
.|+|+|.| .|.+|+++++.|.++||+|+++.++ +++. +.+. ..++.++.||.++++.|+++ ++++|.++
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d-----~~~~---~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKD-----GDRL---RELQDKYDLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESC-----HHHH---HHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHH---HHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 58999999 5999999999999999999999998 4444 3332 35889999999999999988 45899999
Q ss_pred EcccchhhhhHHHHHHHHHHc-CCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEA-GNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~-~~v~~~v~ 110 (310)
-+++.. ....-....|++. + +++.+.
T Consensus 74 a~t~~D--e~Nl~~~~~Ak~~~~-~~~~ia 100 (461)
T 4g65_A 74 AVTNTD--ETNMAACQVAFTLFN-TPNRIA 100 (461)
T ss_dssp ECCSCH--HHHHHHHHHHHHHHC-CSSEEE
T ss_pred EEcCCh--HHHHHHHHHHHHhcC-Ccccee
Confidence 877653 2233344455554 4 566554
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.01 E-value=6.5e-06 Score=64.71 Aligned_cols=88 Identities=22% Similarity=0.377 Sum_probs=58.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~--~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+ ..+...+ .|..+.+ .+.+... ++|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~---~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLS---RLGVEYV-GDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHH---TTCCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHH---HcCCCEE-eeCCcHHHHHHHHHHhCCCCCe
Confidence 4689999999999999999999999999999987 44443332 2343322 3555543 3333332 589
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+||++++.. .....++.++..|
T Consensus 110 ~vi~~~g~~---~~~~~~~~l~~~G 131 (198)
T 1pqw_A 110 VVLNSLAGE---AIQRGVQILAPGG 131 (198)
T ss_dssp EEEECCCTH---HHHHHHHTEEEEE
T ss_pred EEEECCchH---HHHHHHHHhccCC
Confidence 999999742 2334444444333
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=69.53 Aligned_cols=75 Identities=19% Similarity=0.344 Sum_probs=58.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+ |.+|+.+++.|...|++|++++|+ +.+.+.+... .+.. +.+|..+.+++.++++++|+||++
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~-----~~~~~~~~~~--~g~~-~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVN-----HKRLQYLDDV--FGGR-VITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH--TTTS-EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh--cCce-EEEecCCHHHHHHHHhCCCEEEEC
Confidence 479999998 999999999999999999999998 4444333221 2332 456777888999999999999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 237 ~g~~ 240 (369)
T 2eez_A 237 VLVP 240 (369)
T ss_dssp CC--
T ss_pred CCCC
Confidence 9854
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=3.8e-05 Score=62.09 Aligned_cols=97 Identities=12% Similarity=0.184 Sum_probs=63.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-----CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-----QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-----~~d 78 (310)
|+|+|+|++|.+|+.+++.+.+. ++++.+......+. +.+...+.. +..|+++++...+.+. +.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl--------~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPL--------SLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCT--------HHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCH--------HHHhccCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence 58999999999999999999876 79988776553211 111112333 5677877766554432 789
Q ss_pred EEEEcccchhhhhHHHHHHHHHHc-CCccEEccCC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEA-GNVTRFFPSE 112 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~-~~v~~~v~s~ 112 (310)
+|+-+.|... .....+.++|++. + ++.++.+.
T Consensus 72 ~VigTTG~~~-e~~~~l~~aa~~~~~-~~vv~a~N 104 (245)
T 1p9l_A 72 AVVGTTGFTA-ERFQQVESWLVAKPN-TSVLIAPN 104 (245)
T ss_dssp EEECCCCCCH-HHHHHHHHHHHTSTT-CEEEECSC
T ss_pred EEEcCCCCCH-HHHHHHHHHHHhCCC-CCEEEECC
Confidence 9999888653 3344555666655 4 66666543
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=2.8e-06 Score=70.11 Aligned_cols=37 Identities=16% Similarity=0.334 Sum_probs=29.1
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcC
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRE 37 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~ 37 (310)
|++ +|+|+|+|++|.+|+.+++.+.+ .+++++++.+.
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 664 58999999999999999998875 46888755444
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.3e-06 Score=67.08 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=56.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|+ |+||+|+|++|.+|+.+++.+.+.. +++.+. +|+.+....... ..+. +... ++.-.+++.++++++|
T Consensus 5 M~-mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~---gel~--g~~~---gv~v~~dl~~ll~~~D 75 (272)
T 4f3y_A 5 MS-SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDA---GAFL--GKQT---GVALTDDIERVCAEAD 75 (272)
T ss_dssp -C-CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBT---TTTT--TCCC---SCBCBCCHHHHHHHCS
T ss_pred cc-ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccH---HHHh--CCCC---CceecCCHHHHhcCCC
Confidence 44 6899999999999999999998764 677764 565321100000 1110 1100 1111123445556789
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+||+++.+ ......++.|.++| +..++
T Consensus 76 VVIDfT~p---~a~~~~~~~al~~G-~~vVi 102 (272)
T 4f3y_A 76 YLIDFTLP---EGTLVHLDAALRHD-VKLVI 102 (272)
T ss_dssp EEEECSCH---HHHHHHHHHHHHHT-CEEEE
T ss_pred EEEEcCCH---HHHHHHHHHHHHcC-CCEEE
Confidence 99988764 34556677777777 44333
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=2.2e-05 Score=62.54 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=51.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|+|+| +|.+|+.+++.|.+.|++|++++|+ +++. +.+...++... ++.++++++|+|+.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~-----~~~~---~~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN-----PKRT---ARLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS-----HHHH---HHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 57899999 8999999999999999999999998 3333 33333455542 244567899999999
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++...
T Consensus 91 v~~~~ 95 (215)
T 2vns_A 91 VFREH 95 (215)
T ss_dssp SCGGG
T ss_pred CChHH
Confidence 98654
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.90 E-value=6.6e-05 Score=63.66 Aligned_cols=101 Identities=20% Similarity=0.172 Sum_probs=61.6
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCC-CCCchhh-HhHhhhcC-CcEEEEccCCCHHHHHHHhcCCC
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTL-SAPSKSQ-LLDHFKNL-GVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-~~~~~~~-~~~~l~~~-~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
.|++|+|+||||++|+.+++.|.++. +++..+.++.+. +...+.. ....+... ...+... .+.++ +++++|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~~---~~~~~D 77 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDISE---FSPGVD 77 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGGG---TCTTCS
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHHH---HhcCCC
Confidence 37899999999999999999999854 678877655411 1111111 00112111 2222222 02222 226899
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+||.+++.. .+..++..+.+.| ++.+-.|+
T Consensus 78 vvf~a~p~~---~s~~~~~~~~~~g-~~vIDlSa 107 (337)
T 3dr3_A 78 VVFLATAHE---VSHDLAPQFLEAG-CVVFDLSG 107 (337)
T ss_dssp EEEECSCHH---HHHHHHHHHHHTT-CEEEECSS
T ss_pred EEEECCChH---HHHHHHHHHHHCC-CEEEEcCC
Confidence 999998854 4667777777888 76665543
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.89 E-value=3e-05 Score=64.03 Aligned_cols=98 Identities=10% Similarity=0.138 Sum_probs=54.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|.+|++|+|.|++|.+|+.+++.+.+. +.++.+. +|+.+....... .++. +.. ..++.-.+++++++.++|
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~---gel~--G~~--~~gv~v~~dl~~ll~~aD 90 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDA---SILI--GSD--FLGVRITDDPESAFSNTE 90 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBG---GGGT--TCS--CCSCBCBSCHHHHTTSCS
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccch---HHhh--ccC--cCCceeeCCHHHHhcCCC
Confidence 455679999999999999999998865 4677665 554321101011 1111 110 011111123445666788
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+||.++.+ ......++.|.++| +..++
T Consensus 91 VvIDFT~p---~a~~~~~~~~l~~G-v~vVi 117 (288)
T 3ijp_A 91 GILDFSQP---QASVLYANYAAQKS-LIHII 117 (288)
T ss_dssp EEEECSCH---HHHHHHHHHHHHHT-CEEEE
T ss_pred EEEEcCCH---HHHHHHHHHHHHcC-CCEEE
Confidence 88887754 34555666677776 44443
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=5.4e-05 Score=63.63 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=59.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+.+. .++.+ ..+.+.. .+..+...++.+.+++.+.+.++|+|
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~--~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDF--YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCch--HHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 478999996 8999999999999997 89999998321 11221 2222221 24455566788888888888899999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|++++..
T Consensus 231 INaTp~G 237 (315)
T 3tnl_A 231 TNATGVG 237 (315)
T ss_dssp EECSSTT
T ss_pred EECccCC
Confidence 9998754
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-05 Score=66.65 Aligned_cols=97 Identities=24% Similarity=0.236 Sum_probs=58.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcEEEEccCCCHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVNFVVGDVLNHESLV 71 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~~v~~D~~d~~~~~ 71 (310)
|++|++|.|.||+|.+|+.+++.|.++. .+++++..+.+.. ..+. ....... +......|+ |++.
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-g~~~--~~~~~~~~~~~~~~~~~~~~~~~~-d~~~-- 74 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-GKKY--KDAVKWIEQGDIPEEVQDLPIVST-NYED-- 74 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-TSBH--HHHCCCCSSSSCCHHHHTCBEECS-SGGG--
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-CCCH--HHhcCcccccccccCCceeEEeeC-CHHH--
Confidence 6667899999999999999999998765 4777775221111 1111 0100000 011111232 3332
Q ss_pred HHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 72 NAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++++|+||.+++.. .+..++.++.+.| ++ +|-
T Consensus 75 --~~~vDvVf~atp~~---~s~~~a~~~~~aG-~~-VId 106 (350)
T 2ep5_A 75 --HKDVDVVLSALPNE---LAESIELELVKNG-KI-VVS 106 (350)
T ss_dssp --GTTCSEEEECCCHH---HHHHHHHHHHHTT-CE-EEE
T ss_pred --hcCCCEEEECCChH---HHHHHHHHHHHCC-CE-EEE
Confidence 36899999998854 4677888888888 65 443
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.6e-05 Score=66.88 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=58.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhh----------cCCcEEEEccCCCHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFK----------NLGVNFVVGDVLNHES 69 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~----------~~~~~~v~~D~~d~~~ 69 (310)
|+++++|.|+||||++|+.+++.|.++. .++..+..+.+.. .+.. +... .....+... +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG--k~~~--~~~p~~~~~~~~~~~~~~~v~~~---~~~- 75 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG--KPYG--EVVRWQTVGQVPKEIADMEIKPT---DPK- 75 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT--SBHH--HHCCCCSSSCCCHHHHTCBCEEC---CGG-
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC--CChh--HhcccccccccccccccceEEeC---CHH-
Confidence 4445789999999999999999887765 3666664432211 1111 1000 001222222 222
Q ss_pred HHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 70 LVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.++++|+||.+++.. .+..+...+.+.| ++.+-.|+
T Consensus 76 ---~~~~vDvvf~a~p~~---~s~~~a~~~~~~G-~~vIDlSa 111 (359)
T 4dpk_A 76 ---LMDDVDIIFSPLPQG---AAGPVEEQFAKEG-FPVISNSP 111 (359)
T ss_dssp ---GCTTCCEEEECCCTT---THHHHHHHHHHTT-CEEEECSS
T ss_pred ---HhcCCCEEEECCChH---HHHHHHHHHHHCC-CEEEEcCC
Confidence 246899999999865 4667777777888 76666653
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.6e-05 Score=66.88 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=58.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhh----------cCCcEEEEccCCCHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFK----------NLGVNFVVGDVLNHES 69 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~----------~~~~~~v~~D~~d~~~ 69 (310)
|+++++|.|+||||++|+.+++.|.++. .++..+..+.+.. .+.. +... .....+... +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saG--k~~~--~~~p~~~~~~~~~~~~~~~v~~~---~~~- 75 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVG--KPYG--EVVRWQTVGQVPKEIADMEIKPT---DPK- 75 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTT--SBHH--HHCCCCSSSCCCHHHHTCBCEEC---CGG-
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcC--CChh--HhcccccccccccccccceEEeC---CHH-
Confidence 4445789999999999999999887765 3666664432211 1111 1000 001222222 222
Q ss_pred HHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 70 LVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.++++|+||.+++.. .+..+...+.+.| ++.+-.|+
T Consensus 76 ---~~~~vDvvf~a~p~~---~s~~~a~~~~~~G-~~vIDlSa 111 (359)
T 4dpl_A 76 ---LMDDVDIIFSPLPQG---AAGPVEEQFAKEG-FPVISNSP 111 (359)
T ss_dssp ---GCTTCCEEEECCCTT---THHHHHHHHHHTT-CEEEECSS
T ss_pred ---HhcCCCEEEECCChH---HHHHHHHHHHHCC-CEEEEcCC
Confidence 246899999999865 4667777777888 76666653
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.4e-05 Score=65.62 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+++|+|.|+| .|.+|..+++.|.+.|++|++++|+.. +. +.+...++.. .+++.++++ +|+|
T Consensus 12 M~~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~-----~~---~~~~~~g~~~-------~~~~~~~~~-aDvv 74 (296)
T 3qha_A 12 TTEQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIE-----AM---TPLAEAGATL-------ADSVADVAA-ADLI 74 (296)
T ss_dssp ---CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTT-----TS---HHHHHTTCEE-------CSSHHHHTT-SSEE
T ss_pred ccCCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHH-----HH---HHHHHCCCEE-------cCCHHHHHh-CCEE
Confidence 34457899998 799999999999999999999999843 33 3333345432 123456677 9999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|.+.+..
T Consensus 75 i~~vp~~ 81 (296)
T 3qha_A 75 HITVLDD 81 (296)
T ss_dssp EECCSSH
T ss_pred EEECCCh
Confidence 9998854
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.86 E-value=5.7e-05 Score=64.73 Aligned_cols=92 Identities=18% Similarity=0.265 Sum_probs=57.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+++|.|+||||++|+.+++.|.+++|+ ++.+....+ ..+. +.-.+.....-++. .+ .++++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s---aG~~-----~~~~~~~~~~~~~~-~~----~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS---AGKS-----LKFKDQDITIEETT-ET----AFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT---TTCE-----EEETTEEEEEEECC-TT----TTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc---CCCc-----ceecCCCceEeeCC-HH----HhcCCCEE
Confidence 379999999999999999999998764 444433211 1111 00112222222222 11 25789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
|.++|.. .+...+..+.+.| ++.+-.|+
T Consensus 69 f~a~~~~---~s~~~a~~~~~~G-~~vIDlSa 96 (366)
T 3pwk_A 69 LFSAGSS---TSAKYAPYAVKAG-VVVVDNTS 96 (366)
T ss_dssp EECSCHH---HHHHHHHHHHHTT-CEEEECSS
T ss_pred EECCChH---hHHHHHHHHHHCC-CEEEEcCC
Confidence 9999854 4667777777888 65554443
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.2e-05 Score=64.77 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=28.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL 40 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 40 (310)
+||.++| .|..|..+++.|++.||+|++..|+.+.
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 6899998 8999999999999999999999998543
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=6.9e-05 Score=62.75 Aligned_cols=90 Identities=22% Similarity=0.196 Sum_probs=60.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC-------------cEEEEccCCCHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-------------VNFVVGDVLNHESL 70 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~-------------~~~v~~D~~d~~~~ 70 (310)
|++|.++| .|..|..+++.|++.||+|++..|+ +++.+ .+...+ ..++..-+.|.+.+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~-----~~~~~---~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v 73 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVD---GLVAAGASAARSARDAVQGADVVISMLPASQHV 73 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHH---HHHHTTCEECSSHHHHHTTCSEEEECCSCHHHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCC-----HHHHH---HHHHcCCEEcCCHHHHHhcCCceeecCCchHHH
Confidence 67999999 8999999999999999999999998 44443 222222 33444445566666
Q ss_pred HHHhcC----------CCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 71 VNAIKQ----------VDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 71 ~~~~~~----------~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++++.+ -++||++.... ...++.+.+.+++.|
T Consensus 74 ~~V~~~~~g~~~~~~~g~iiId~sT~~-p~~~~~~a~~~~~~G 115 (300)
T 3obb_A 74 EGLYLDDDGLLAHIAPGTLVLECSTIA-PTSARKIHAAARERG 115 (300)
T ss_dssp HHHHHSSSSSTTSCCC-CEEEECSCCC-HHHHHHHHHHHHTTT
T ss_pred HHHHhchhhhhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcC
Confidence 655432 13455554443 456677777777766
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.9e-05 Score=65.81 Aligned_cols=78 Identities=17% Similarity=0.257 Sum_probs=55.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|.|+|+||.+|+.+++.|.+.|++|+++.|+ +++.+. +...++. ..+ ..++++++|+||.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~-----~~~~~~---~~~~g~~-----~~~---~~~~~~~aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA-----PEGRDR---LQGMGIP-----LTD---GDGWIDEADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS-----HHHHHH---HHHTTCC-----CCC---SSGGGGTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHH---HHhcCCC-----cCC---HHHHhcCCCEEEEc
Confidence 4799999988999999999999999999999987 444322 2223432 122 23456789999999
Q ss_pred ccchhhhhHHHHHHHHH
Q 021596 84 VGHALLADQVKIIAAIK 100 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~ 100 (310)
++... ...+++.+.
T Consensus 75 v~~~~---~~~v~~~l~ 88 (286)
T 3c24_A 75 LPDNI---IEKVAEDIV 88 (286)
T ss_dssp SCHHH---HHHHHHHHG
T ss_pred CCchH---HHHHHHHHH
Confidence 98653 445555443
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.81 E-value=5e-05 Score=64.61 Aligned_cols=91 Identities=22% Similarity=0.286 Sum_probs=58.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|++|+|.||+|.+|+.+++.|.+++ .+++++....+.. .+. .+. +..+...|+ +++ .++++|+|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G--~~~----~~~--~~~i~~~~~-~~~----~~~~vDvV 69 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEG--KTY----RFN--GKTVRVQNV-EEF----DWSQVHIA 69 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTT--CEE----EET--TEEEEEEEG-GGC----CGGGCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCC--Cce----eec--CceeEEecC-ChH----HhcCCCEE
Confidence 6899999999999999999999984 4677766321110 000 011 212222222 122 34689999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
|.++|.. .+...+.++.+.| ++.+..|
T Consensus 70 f~a~g~~---~s~~~a~~~~~~G-~~vId~s 96 (336)
T 2r00_A 70 LFSAGGE---LSAKWAPIAAEAG-VVVIDNT 96 (336)
T ss_dssp EECSCHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred EECCCch---HHHHHHHHHHHcC-CEEEEcC
Confidence 9999865 4677778888888 6555444
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.80 E-value=7.2e-05 Score=65.75 Aligned_cols=92 Identities=15% Similarity=0.289 Sum_probs=65.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-C---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC--CCHHH-HHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-H---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV--LNHES-LVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~--~d~~~-~~~~~~~ 76 (310)
+++|+|+| .|.||+.+++.|.++. + +|++.+...... ...+. .++.+...++ .|.++ +.+++++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-----~~~~~---~g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-----DVAQQ---YGVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-----CHHHH---HTCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-----hHHhh---cCCceeEEeccchhHHHHHHHHhcC
Confidence 47899999 7999999999999875 4 577776653221 11222 2556665555 45544 5567777
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
.|+|++++.+. ....++++|.++| + +++
T Consensus 84 ~DvVIN~s~~~---~~l~Im~acleaG-v-~Yl 111 (480)
T 2ph5_A 84 NDFLIDVSIGI---SSLALIILCNQKG-A-LYI 111 (480)
T ss_dssp TCEEEECCSSS---CHHHHHHHHHHHT-C-EEE
T ss_pred CCEEEECCccc---cCHHHHHHHHHcC-C-CEE
Confidence 79999977654 6889999999999 5 444
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.7e-05 Score=65.41 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=50.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+.+|+|.|+| .|.+|+.++..|.+.|++|+++.|+ +++. +.+...++.. ..+ ..++++++|+|
T Consensus 1 M~~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~---~~~~~~g~~~----~~~---~~~~~~~~D~v 64 (301)
T 3cky_A 1 MEKSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLM-----EANV---AAVVAQGAQA----CEN---NQKVAAASDII 64 (301)
T ss_dssp ---CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSS-----HHHH---HHHHTTTCEE----CSS---HHHHHHHCSEE
T ss_pred CCCCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHH---HHHHHCCCee----cCC---HHHHHhCCCEE
Confidence 77789999999 7999999999999999999999887 4333 2333335432 123 34456679999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
+.+.+..
T Consensus 65 i~~vp~~ 71 (301)
T 3cky_A 65 FTSLPNA 71 (301)
T ss_dssp EECCSSH
T ss_pred EEECCCH
Confidence 9998643
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00012 Score=62.91 Aligned_cols=72 Identities=22% Similarity=0.204 Sum_probs=48.8
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.+|+|.|+| .|.+|..++..|.+.|++|+++.|+ +++. +.+...++.. ..+.+++.+..+.+|+||.
T Consensus 21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~-----~~~~---~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLN-----VNAV---QALEREGIAG----ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHTTTCBC----CSSHHHHHHHSCSSCEEEE
T ss_pred cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHH---HHHHHCCCEE----eCCHHHHHhcCCCCCEEEE
Confidence 358999998 8999999999999999999999998 4443 2333333321 2344433333334488888
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+.+..
T Consensus 88 ~vp~~ 92 (358)
T 4e21_A 88 MVPAA 92 (358)
T ss_dssp CSCGG
T ss_pred eCCHH
Confidence 77654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.5e-05 Score=66.12 Aligned_cols=74 Identities=16% Similarity=0.189 Sum_probs=52.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHH----HHHhc-CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESL----VNAIK-QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~----~~~~~-~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|+++.|+ +++.+.++.+ +...+ .|+.+.+++ .++.. ++|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~-----~~~~~~~~~~---g~~~~-~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG-----EGKEELFRSI---GGEVF-IDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS-----TTHHHHHHHT---TCCEE-EETTTCSCHHHHHHHHHTSCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC-----HHHHHHHHHc---CCceE-EecCccHhHHHHHHHHhCCCCC
Confidence 3689999999999999999999999999999998 4455444433 44322 365533333 33222 699
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
+||++++.
T Consensus 241 ~vi~~~g~ 248 (347)
T 2hcy_A 241 GVINVSVS 248 (347)
T ss_dssp EEEECSSC
T ss_pred EEEECCCc
Confidence 99999985
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.6e-05 Score=67.64 Aligned_cols=93 Identities=12% Similarity=0.132 Sum_probs=58.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
++||.|+|++|++|+.++..++..| .+|++++++ ..+.+- ...+.+.... ..++.-..++.++++++|+|
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-----~~k~~g~a~DL~~~~~~--~~~i~~t~d~~~al~dADvV 80 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-----AVGLEGVAEEIRHCGFE--GLNLTFTSDIKEALTDAKYI 80 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-----HHHHHHHHHHHHHHCCT--TCCCEEESCHHHHHTTEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-----chhHHHHHHhhhhCcCC--CCceEEcCCHHHHhCCCCEE
Confidence 5799999999999999999999998 589999987 333221 1112221100 01111112455678899999
Q ss_pred EEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 81 ISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
|.++|... ....+.+++++.+..
T Consensus 81 vitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~ 116 (343)
T 3fi9_A 81 VSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC 116 (343)
T ss_dssp EECCC-------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998643 334456677776664
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.79 E-value=4e-05 Score=64.70 Aligned_cols=69 Identities=25% Similarity=0.305 Sum_probs=52.0
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.||+|.|+| .|.+|..++..|.+.|++|++..|+ +++. +.+...++.. .+++.++++++|+||.
T Consensus 20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~---~~l~~~g~~~-------~~~~~~~~~~aDvvi~ 83 (310)
T 3doj_A 20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRT-----LSKC---DELVEHGASV-------CESPAEVIKKCKYTIA 83 (310)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGG---HHHHHTTCEE-------CSSHHHHHHHCSEEEE
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHH---HHHHHCCCeE-------cCCHHHHHHhCCEEEE
Confidence 478999998 7999999999999999999999998 4444 3333345432 1234456678999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+.+..
T Consensus 84 ~vp~~ 88 (310)
T 3doj_A 84 MLSDP 88 (310)
T ss_dssp CCSSH
T ss_pred EcCCH
Confidence 98753
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.77 E-value=7.7e-05 Score=64.07 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=57.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHh-Hhh-------hcCCcEEEEccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DHF-------KNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~-~~l-------~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
++|+|.||+|.+|+.+++.|.+++ .+|+++.++.+.. ..+.... ..+ ......+... |++. +++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~ 81 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSA-GKKYKDACYWFQDRDIPENIKDMVVIPT---DPKH---EEF 81 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-TSBHHHHSCCCCSSCCCHHHHTCBCEES---CTTS---GGG
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccc-cccHHHhcccccccccccCceeeEEEeC---CHHH---Hhc
Confidence 689999999999999999998875 5788887643221 1111000 000 0001111112 2222 335
Q ss_pred -CCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 76 -QVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 76 -~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++|+||.+++.. .+..++..+.+.| ++ +|-
T Consensus 82 ~~~DvV~~atp~~---~~~~~a~~~~~aG-~~-VId 112 (354)
T 1ys4_A 82 EDVDIVFSALPSD---LAKKFEPEFAKEG-KL-IFS 112 (354)
T ss_dssp TTCCEEEECCCHH---HHHHHHHHHHHTT-CE-EEE
T ss_pred CCCCEEEECCCch---HHHHHHHHHHHCC-CE-EEE
Confidence 899999999864 4566777777878 55 554
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.75 E-value=6e-05 Score=64.71 Aligned_cols=95 Identities=16% Similarity=0.242 Sum_probs=58.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
++|+|.||+|.+|+.+++.|.++. .+++++.+..+.. .+... ...+. +.. ..|+.-.+ .+.++++|+||.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g--~~~~~~~~~~~--~~v--~~dl~~~~--~~~~~~vDvVf~ 88 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG--QSMESVFPHLR--AQK--LPTLVSVK--DADFSTVDAVFC 88 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT--SCHHHHCGGGT--TSC--CCCCBCGG--GCCGGGCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC--CCHHHhCchhc--Ccc--cccceecc--hhHhcCCCEEEE
Confidence 589999999999999999999886 4788877653211 11110 00111 110 12332222 335568999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+++.. .+...+..+ +.| ++.+-.|+
T Consensus 89 atp~~---~s~~~a~~~-~aG-~~VId~sa 113 (359)
T 1xyg_A 89 CLPHG---TTQEIIKEL-PTA-LKIVDLSA 113 (359)
T ss_dssp CCCTT---THHHHHHTS-CTT-CEEEECSS
T ss_pred cCCch---hHHHHHHHH-hCC-CEEEECCc
Confidence 99864 356677777 777 65333343
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.1e-05 Score=65.27 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=52.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH----HHHHHhc-CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE----SLVNAIK-QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~----~~~~~~~-~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +... ..|..+.+ .+.++.. ++|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI---GFDA-AFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCcE-EEecCCHHHHHHHHHHHhCCCCe
Confidence 3689999999999999999999999999999987 4454443333 4322 23655422 2333222 589
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
+||+++|.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1v3u_A 217 CYFDNVGG 224 (333)
T ss_dssp EEEESSCH
T ss_pred EEEECCCh
Confidence 99999985
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=5.6e-05 Score=65.00 Aligned_cols=91 Identities=15% Similarity=0.310 Sum_probs=57.2
Q ss_pred CceEEEEccCcchhHHHHH-HHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVE-ASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~-~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|++|.|.||+|++|+.+++ .|.+++++ ++.+..+.. ..+. ..+. +..+...|..+++. ++++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~---G~~v---~~~~--g~~i~~~~~~~~~~----~~~~Dv 68 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL---GQAA---PSFG--GTTGTLQDAFDLEA----LKALDI 68 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST---TSBC---CGGG--TCCCBCEETTCHHH----HHTCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCC---CCCc---cccC--CCceEEEecCChHH----hcCCCE
Confidence 5799999999999999999 55555543 455554411 1111 1111 12223334445554 358999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
||.++|.. .+......+.+.| ++.+|.
T Consensus 69 Vf~a~g~~---~s~~~a~~~~~~G-~k~vVI 95 (367)
T 1t4b_A 69 IVTCQGGD---YTNEIYPKLRESG-WQGYWI 95 (367)
T ss_dssp EEECSCHH---HHHHHHHHHHHTT-CCCEEE
T ss_pred EEECCCch---hHHHHHHHHHHCC-CCEEEE
Confidence 99999854 5677777888888 764444
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.68 E-value=1.4e-05 Score=59.33 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=50.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+| +|.+|+.+++.|.+.|++|+++.|+ +++.+. .+.+ +.... +.. ++.++++++|+|+.
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~-----~~~~~~~a~~~---~~~~~--~~~---~~~~~~~~~Divi~ 86 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRN-----IDHVRAFAEKY---EYEYV--LIN---DIDSLIKNNDVIIT 86 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESC-----HHHHHHHHHHH---TCEEE--ECS---CHHHHHHTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHHh---CCceE--eec---CHHHHhcCCCEEEE
Confidence 37999999 5999999999999999889999998 444422 1222 33322 222 34556779999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
+++...
T Consensus 87 at~~~~ 92 (144)
T 3oj0_A 87 ATSSKT 92 (144)
T ss_dssp CSCCSS
T ss_pred eCCCCC
Confidence 988653
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.68 E-value=5.6e-05 Score=64.44 Aligned_cols=88 Identities=18% Similarity=0.262 Sum_probs=59.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d 78 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +... ..|..+. +.+.+... ++|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST-----EEKAETARKL---GCHH-TINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEECCCHHHHHHHHHHhCCCCCe
Confidence 3689999999999999999999999999999998 4455444443 3322 2355443 33444443 689
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+||+++|. ......++.++..|
T Consensus 217 ~vi~~~g~---~~~~~~~~~l~~~G 238 (333)
T 1wly_A 217 VVYDSIGK---DTLQKSLDCLRPRG 238 (333)
T ss_dssp EEEECSCT---TTHHHHHHTEEEEE
T ss_pred EEEECCcH---HHHHHHHHhhccCC
Confidence 99999986 23344444444433
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=5e-05 Score=64.59 Aligned_cols=88 Identities=18% Similarity=0.180 Sum_probs=59.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~--~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +...+ .|..+.+ .+.+... ++|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQV-INYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCEE-EECCCccHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 5555444443 33222 3554433 3333332 589
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+||+++|. ......++.++..|
T Consensus 212 ~vi~~~g~---~~~~~~~~~l~~~G 233 (327)
T 1qor_A 212 VVYDSVGR---DTWERSLDCLQRRG 233 (327)
T ss_dssp EEEECSCG---GGHHHHHHTEEEEE
T ss_pred EEEECCch---HHHHHHHHHhcCCC
Confidence 99999992 23444455554433
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.66 E-value=3.1e-05 Score=65.42 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=56.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE--------ccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV--------GDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~--------~D~~d~~~~~~~~~ 75 (310)
||+|+|+| .|.+|+.++..|.+.|++|+++.|+ +++. +.+...++.... .+..+.+++.++++
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~-----~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQW-----PAHI---EAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNE 73 (316)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHHHCEEEEETTEEEEECCCEECGGGCCTTSC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHH---HHHHhCCEEEEeCCCeeEecceeecchhhcccCC
Confidence 68999999 5999999999999999999999998 4343 233333443322 12223333333445
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHH
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
++|+||.+.+... ...+++....
T Consensus 74 ~~d~vi~~v~~~~---~~~v~~~l~~ 96 (316)
T 2ew2_A 74 QVDLIIALTKAQQ---LDAMFKAIQP 96 (316)
T ss_dssp CCSEEEECSCHHH---HHHHHHHHGG
T ss_pred CCCEEEEEecccc---HHHHHHHHHH
Confidence 8999999998543 3445544443
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.65 E-value=7.5e-05 Score=64.15 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=53.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~--~~d 78 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +...+ .|..+.+ .+.+... ++|
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~-~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAHEV-FNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEE-EETTSTTHHHHHHHHHCTTCEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHc---CCCEE-EeCCCchHHHHHHHHcCCCCcE
Confidence 3689999999999999999999999999999998 5555444333 43322 3544433 3444443 699
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
+||+++|.
T Consensus 242 ~vi~~~G~ 249 (351)
T 1yb5_A 242 IIIEMLAN 249 (351)
T ss_dssp EEEESCHH
T ss_pred EEEECCCh
Confidence 99999984
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.65 E-value=4.7e-05 Score=63.51 Aligned_cols=68 Identities=22% Similarity=0.310 Sum_probs=50.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|.|+| .|.+|..+++.|.+.|++|++..|+ +++.+ .+...++.. . ++..++++++|+||.+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~---~~~~~g~~~----~---~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRN-----PAKCA---PLVALGARQ----A---SSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSS-----GGGGH---HHHHHTCEE----C---SCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHH---HHHHCCCee----c---CCHHHHHHcCCEEEEE
Confidence 57999998 8999999999999999999999998 44442 222234332 1 2344566789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 65 v~~~ 68 (287)
T 3pdu_A 65 LADP 68 (287)
T ss_dssp CSSH
T ss_pred cCCH
Confidence 8864
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.64 E-value=8.9e-05 Score=62.69 Aligned_cols=74 Identities=24% Similarity=0.110 Sum_probs=49.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+|+|.|+| .|.+|..++..|.+.| ++|++..|+.... ++. ...+.+...++ .. . +..++++++|+||
T Consensus 24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~--~~~~~~~~~~~~~g~---~~-~----s~~e~~~~aDvVi 92 (317)
T 4ezb_A 24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDP--AASGALRARAAELGV---EP-L----DDVAGIACADVVL 92 (317)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCT--TTHHHHHHHHHHTTC---EE-E----SSGGGGGGCSEEE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccc--cchHHHHHHHHHCCC---CC-C----CHHHHHhcCCEEE
Confidence 47999999 7999999999999999 9999999984211 111 12233333444 11 0 2234566788888
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
.+.+...
T Consensus 93 ~avp~~~ 99 (317)
T 4ezb_A 93 SLVVGAA 99 (317)
T ss_dssp ECCCGGG
T ss_pred EecCCHH
Confidence 8877653
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.62 E-value=6.7e-05 Score=64.62 Aligned_cols=89 Identities=15% Similarity=0.090 Sum_probs=55.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEc------cCC-CHHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG------DVL-NHESLVNA 73 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~------D~~-d~~~~~~~ 73 (310)
|.++|+|+|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+... .+..+... .+. ..+++.++
T Consensus 1 mm~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (359)
T 1bg6_A 1 MIESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDR--GAIIAEGPGLAGTAHPDLLTSDIGLA 72 (359)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHH--TSEEEESSSCCEEECCSEEESCHHHH
T ss_pred CCCcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHhc--CCeEEeccccccccccceecCCHHHH
Confidence 44468999999 5999999999999999999999997 4343222211 12221111 010 11234456
Q ss_pred hcCCCEEEEcccchhhhhHHHHHHHHH
Q 021596 74 IKQVDVVISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 74 ~~~~d~Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
++++|+||.+++... ...+++.+.
T Consensus 73 ~~~~D~vi~~v~~~~---~~~~~~~l~ 96 (359)
T 1bg6_A 73 VKDADVILIVVPAIH---HASIAANIA 96 (359)
T ss_dssp HTTCSEEEECSCGGG---HHHHHHHHG
T ss_pred HhcCCEEEEeCCchH---HHHHHHHHH
Confidence 778999999998654 344554443
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=8e-05 Score=64.05 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=59.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d 78 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +... ..|..+. +.+.+... ++|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS-----QKKLQMAEKL---GAAA-GFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCcE-EEecCChHHHHHHHHHhcCCCce
Confidence 3689999999999999999999999999999998 5555444443 3322 2344443 33444443 689
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+||+++|.. .....++.++..|
T Consensus 234 ~vi~~~G~~---~~~~~~~~l~~~G 255 (354)
T 2j8z_A 234 LILDCIGGS---YWEKNVNCLALDG 255 (354)
T ss_dssp EEEESSCGG---GHHHHHHHEEEEE
T ss_pred EEEECCCch---HHHHHHHhccCCC
Confidence 999999863 2334445544433
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00031 Score=57.17 Aligned_cols=101 Identities=20% Similarity=0.147 Sum_probs=67.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC--------------CCchhhHh-Hhhh--cCCc--EEEEccC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLL-DHFK--NLGV--NFVVGDV 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~--------------~~~~~~~~-~~l~--~~~~--~~v~~D~ 64 (310)
++|+|+| .|.+|+.+++.|...|. ++++++++.-.. ...|.+.+ +.+. .+.+ +.+..++
T Consensus 32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 6899999 59999999999999996 788888874100 00333322 2222 2344 3444555
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
. .+.+.+.++++|+||.+.... .....+.++|++.+ ++.+..
T Consensus 111 ~-~~~~~~~~~~~DvVi~~~d~~--~~~~~l~~~~~~~~-~p~i~~ 152 (249)
T 1jw9_B 111 D-DAELAALIAEHDLVLDCTDNV--AVRNQLNAGCFAAK-VPLVSG 152 (249)
T ss_dssp C-HHHHHHHHHTSSEEEECCSSH--HHHHHHHHHHHHHT-CCEEEE
T ss_pred C-HhHHHHHHhCCCEEEEeCCCH--HHHHHHHHHHHHcC-CCEEEe
Confidence 4 466777888999999998754 34455677788877 554443
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00057 Score=58.69 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=30.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRE 37 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~ 37 (310)
|+.|++|.|+|+||.||+.+++.+.++. ++|++++-+
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag 39 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 39 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC
Confidence 7778899999999999999999998864 677766433
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.58 E-value=6.8e-05 Score=63.12 Aligned_cols=68 Identities=21% Similarity=0.329 Sum_probs=51.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|.|+| .|.+|..+++.|.+.|++|++..|+ +++.+ .+...++.. . +++.++++++|+||.+
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~---~~~~~g~~~----~---~~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRS-----PGKAA---ALVAAGAHL----C---ESVKAALSASPATIFV 72 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHH---HHHHHTCEE----C---SSHHHHHHHSSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHHCCCee----c---CCHHHHHhcCCEEEEE
Confidence 57999998 7999999999999999999999998 44443 222234432 1 2345566789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 73 vp~~ 76 (306)
T 3l6d_A 73 LLDN 76 (306)
T ss_dssp CSSH
T ss_pred eCCH
Confidence 8865
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00023 Score=61.29 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=56.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+ |.+|+.+++.+...|.+|+++.|+ +.+.+.+..+....+..+ ..+.+++.+.+.++|+||++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~-----~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEEC
Confidence 368999997 999999999999999999999998 555544443322222222 23456777788899999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 238 ~~~~ 241 (361)
T 1pjc_A 238 VLVP 241 (361)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 9754
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00015 Score=61.38 Aligned_cols=68 Identities=26% Similarity=0.392 Sum_probs=52.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|.|+| .|.+|..+++.|.+.|++|++..|+ +++. +.+...++... +++.++++++|+||.+
T Consensus 31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~---~~l~~~g~~~~-------~~~~e~~~~aDvVi~~ 94 (320)
T 4dll_A 31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRT-----PARA---ASLAALGATIH-------EQARAAARDADIVVSM 94 (320)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHTTTCEEE-------SSHHHHHTTCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCC-----HHHH---HHHHHCCCEee-------CCHHHHHhcCCEEEEE
Confidence 57999998 7999999999999999999999998 4444 33334454332 2445677899999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 95 vp~~ 98 (320)
T 4dll_A 95 LENG 98 (320)
T ss_dssp CSSH
T ss_pred CCCH
Confidence 8854
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=61.03 Aligned_cols=67 Identities=22% Similarity=0.375 Sum_probs=50.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|..+++.|.+.|++|++.+|+ +++. +.+...++... +++.++++++|+||.+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~---~~~~~~g~~~~-------~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRS-----PEKA---EELAALGAERA-------ATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGG---HHHHHTTCEEC-------SSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHH---HHHHHCCCeec-------CCHHHHHhcCCEEEEEc
Confidence 7999999 7999999999999999999999998 4444 33333344321 23455667899999998
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 66 p~~ 68 (287)
T 3pef_A 66 ADP 68 (287)
T ss_dssp SSH
T ss_pred CCH
Confidence 843
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=5.7e-05 Score=64.72 Aligned_cols=75 Identities=15% Similarity=0.226 Sum_probs=52.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH----HHHHHHhc-CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH----ESLVNAIK-QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~----~~~~~~~~-~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.+.. ..+...+ .|..+. +.+.++.. ++|
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~--~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS-----KEKVDLLKT--KFGFDDA-FNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH--TSCCSEE-EETTSCSCSHHHHHHHCTTCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HcCCceE-EecCCHHHHHHHHHHHhCCCCc
Confidence 3689999999999999999999999999999998 445433331 2344322 254432 23333322 699
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
+||++++.
T Consensus 228 ~vi~~~g~ 235 (345)
T 2j3h_A 228 IYFENVGG 235 (345)
T ss_dssp EEEESSCH
T ss_pred EEEECCCH
Confidence 99999984
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00027 Score=60.87 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=57.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHh-Hhhh-------cCCcEEEEccCCCHHHHHHHh
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DHFK-------NLGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~-~~l~-------~~~~~~v~~D~~d~~~~~~~~ 74 (310)
|++|.|.||||++|+.+++.|.++. .++..+.-+.++. ..+.... ..+. .....+...|..+ .+
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~sa-Gk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~------~~ 91 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSA-GKKYKDAASWKQTETLPETEQDIVVQECKPEG------NF 91 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-TSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT------TG
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeecccccc-CCCHHHhcccccccccccccccceEEeCchhh------hc
Confidence 4689999999999999999887765 3665553221111 1111100 0000 0112222222210 25
Q ss_pred cCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 75 KQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+++|+||.+++.. .+..+...+.+.| ++.+-.|+
T Consensus 92 ~~~Dvvf~alp~~---~s~~~~~~~~~~G-~~VIDlSa 125 (381)
T 3hsk_A 92 LECDVVFSGLDAD---VAGDIEKSFVEAG-LAVVSNAK 125 (381)
T ss_dssp GGCSEEEECCCHH---HHHHHHHHHHHTT-CEEEECCS
T ss_pred ccCCEEEECCChh---HHHHHHHHHHhCC-CEEEEcCC
Confidence 6899999998854 4667777777888 66555544
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0011 Score=57.40 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=54.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+++|+|+| .|.+|+.+++.+.+.|++|++++.+.... . . ...-+.+..|..|.+.+.++.+.+|+|..
T Consensus 12 ~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p-~------~---~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 12 GATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCP-C------R---YVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCT-T------G---GGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCCh-h------h---hhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 57899999 69999999999999999999998764322 0 1 11235677999999999999999998744
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00038 Score=58.80 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=59.5
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhH-hHhhhc------CCcEEEEccCCCHHHH
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL-LDHFKN------LGVNFVVGDVLNHESL 70 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~~ 70 (310)
|++ +++|.|+|+ |.+|+.++..|+..|. +|++++++ +.+.+- ...+.+ .++.+...|.
T Consensus 1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~-----~~k~~g~a~DL~~~~~~~~~~v~i~~~~~------ 68 (326)
T 3pqe_A 1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVN-----KEKAMGDVMDLNHGKAFAPQPVKTSYGTY------ 68 (326)
T ss_dssp -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGSSSCCEEEEECG------
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc-----hHHHHHHHHHHHhccccccCCeEEEeCcH------
Confidence 544 689999995 9999999999999986 89999987 333321 111221 2445443332
Q ss_pred HHHhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 71 VNAIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 71 ~~~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++++++|+||.++|... ....+.+++++.+..
T Consensus 69 -~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~ 113 (326)
T 3pqe_A 69 -EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG 113 (326)
T ss_dssp -GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35789999999998643 233455666666654
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00017 Score=60.29 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=52.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+|+ |.+|+.++..|.+.|. +|+++.|+ +++.+.+ +.+.. ... +..+.+++.+++.++|+||
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~-----~~ka~~la~~~~~-~~~----~~~~~~~~~~~~~~aDivI 209 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRT-----VEKAERLVREGDE-RRS----AYFSLAEAETRLAEYDIII 209 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSS-----HHHHHHHHHHSCS-SSC----CEECHHHHHHTGGGCSEEE
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhhh-ccC----ceeeHHHHHhhhccCCEEE
Confidence 478999996 8899999999999997 89999998 4444322 22211 100 2223456777888999999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
++++..
T Consensus 210 n~t~~~ 215 (297)
T 2egg_A 210 NTTSVG 215 (297)
T ss_dssp ECSCTT
T ss_pred ECCCCC
Confidence 998854
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00011 Score=62.67 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=52.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc-CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK-QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~-~~d~ 79 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.+. +..++..+ .|..+.+ .+.++.. ++|+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~--~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG-----AEKCRFLV--EELGFDGA-IDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH--HTTCCSEE-EETTTSCHHHHHHHHCTTCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH--HHcCCCEE-EECCCHHHHHHHHHhcCCCceE
Confidence 4689999999999999999999999999999998 54554330 23344322 2444433 3333322 6999
Q ss_pred EEEcccc
Q 021596 80 VISTVGH 86 (310)
Q Consensus 80 Vi~~a~~ 86 (310)
||++++.
T Consensus 222 vi~~~g~ 228 (336)
T 4b7c_A 222 FFDNVGG 228 (336)
T ss_dssp EEESSCH
T ss_pred EEECCCc
Confidence 9999984
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0017 Score=56.22 Aligned_cols=87 Identities=23% Similarity=0.341 Sum_probs=62.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|++|+|+|+ |..|+.+++.|.+.|++|+++..+.... . ..+ .-..+..|..|.+.+.++.+++|+|+..
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~-~------~~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSP-A------GQV---ADEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT-T------GGG---SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc-h------hhh---CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 569999995 8999999999999999999988763321 0 111 1245678999999999888899999864
Q ss_pred ccchhhhhHHHHHHHHHHcCCcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
.... ...+++.+.+.| ++
T Consensus 70 ~e~~----~~~~~~~l~~~g-i~ 87 (380)
T 3ax6_A 70 LEHI----DVQTLKKLYNEG-YK 87 (380)
T ss_dssp CSCS----CHHHHHHHHHTT-CE
T ss_pred ccCC----CHHHHHHHHHCC-Ce
Confidence 4322 134455666667 64
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00022 Score=59.94 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=51.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|.|+| .|.+|..++..|.+.|++|++..|+ +++. +.+...+...+..|+ .++++++|+||.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~---~~~~~~g~~~~~~~~------~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLN-----PQAC---ANLLAEGACGAAASA------REFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHHTTCSEEESSS------TTTTTTCSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECC-----HHHH---HHHHHcCCccccCCH------HHHHhcCCEEEEE
Confidence 57899998 7999999999999999999999998 4444 333334544323333 3456789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 72 vp~~ 75 (303)
T 3g0o_A 72 VVNA 75 (303)
T ss_dssp CSSH
T ss_pred CCCH
Confidence 8864
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00012 Score=63.04 Aligned_cols=74 Identities=20% Similarity=0.236 Sum_probs=52.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc-CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK-QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~-~~d~ 79 (310)
.+|+|+||+|.+|..+++.+...|. +|++++|+ +++.+.+.. ..+... ..|..+.+ .+.+... ++|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~-----~~~~~~~~~--~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT-----HEKCILLTS--ELGFDA-AINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHH--TSCCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHH--HcCCce-EEecCchHHHHHHHHhcCCCCCE
Confidence 7899999999999999999999998 99999997 444433322 134332 23554432 3333333 5999
Q ss_pred EEEcccc
Q 021596 80 VISTVGH 86 (310)
Q Consensus 80 Vi~~a~~ 86 (310)
||+++|.
T Consensus 234 vi~~~G~ 240 (357)
T 2zb4_A 234 YFDNVGG 240 (357)
T ss_dssp EEESCCH
T ss_pred EEECCCH
Confidence 9999984
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0002 Score=59.95 Aligned_cols=66 Identities=29% Similarity=0.398 Sum_probs=50.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|++|.|+||.|.+|..++..|.+.|++|+++.|+. . .+..++++++|+||.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~-----~-----------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED-----W-----------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC-----G-----------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc-----c-----------------------cCHHHHhcCCCEEEEe
Confidence 36899999999999999999999999999998872 1 0234567789999999
Q ss_pred ccchhhhhHHHHHHHHH
Q 021596 84 VGHALLADQVKIIAAIK 100 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~ 100 (310)
++... ...+++...
T Consensus 73 vp~~~---~~~vl~~l~ 86 (298)
T 2pv7_A 73 VPINL---TLETIERLK 86 (298)
T ss_dssp SCGGG---HHHHHHHHG
T ss_pred CCHHH---HHHHHHHHH
Confidence 88653 445554443
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0007 Score=60.33 Aligned_cols=76 Identities=18% Similarity=0.186 Sum_probs=48.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|.|+| .|.+|..++..|.+.|++|++..|+ +++.+.+......+..+.. ..+.+++.+.++++|+|+.+
T Consensus 4 ~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 4 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEEEC
T ss_pred CCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEEEe
Confidence 68999999 7999999999999999999999998 4444322211111221111 12444444444456777766
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 76 Vp~~ 79 (484)
T 4gwg_A 76 VKAG 79 (484)
T ss_dssp SCSS
T ss_pred cCCh
Confidence 6553
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00016 Score=61.80 Aligned_cols=92 Identities=13% Similarity=0.121 Sum_probs=62.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d 78 (310)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +...+ .|..+. +.+.++.. ++|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---ga~~~-~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS-----EDKLRRAKAL---GADET-VNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTSTTHHHHHHHHTTTTCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EcCCcccHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 5555444443 33222 355443 33444443 689
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+||++++ . ......++.++..| +++.
T Consensus 238 ~vi~~~g-~--~~~~~~~~~l~~~G---~~v~ 263 (343)
T 2eih_A 238 KVVDHTG-A--LYFEGVIKATANGG---RIAI 263 (343)
T ss_dssp EEEESSC-S--SSHHHHHHHEEEEE---EEEE
T ss_pred EEEECCC-H--HHHHHHHHhhccCC---EEEE
Confidence 9999999 3 23445555555544 5554
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00016 Score=60.72 Aligned_cols=87 Identities=18% Similarity=0.234 Sum_probs=58.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++. .++..+ .|..+.+++.+.+.++|+||+
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~---~ga~~~-~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLA---LGAEEA-ATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHH---TTCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHh---cCCCEE-EECCcchhHHHHhcCceEEEE-
Confidence 3689999999999999999999999999999998 444444433 344322 354441344444578999999
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
++.. .....++.++..|
T Consensus 196 ~g~~---~~~~~~~~l~~~G 212 (302)
T 1iz0_A 196 VRGK---EVEESLGLLAHGG 212 (302)
T ss_dssp CSCT---THHHHHTTEEEEE
T ss_pred CCHH---HHHHHHHhhccCC
Confidence 8752 3334444444433
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00013 Score=61.14 Aligned_cols=67 Identities=25% Similarity=0.303 Sum_probs=49.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|..++..|.+.|++|++++|+ +++. +.+...++.. ..+ +.++++++|+||.+.
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~---~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v 69 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN-----PEAI---ADVIAAGAET----AST---AKAIAEQCDVIITML 69 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHHTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHH---HHHHHCCCee----cCC---HHHHHhCCCEEEEEC
Confidence 7999999 7999999999999999999999887 4443 2333335432 123 344567899999999
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 70 ~~~ 72 (299)
T 1vpd_A 70 PNS 72 (299)
T ss_dssp SSH
T ss_pred CCH
Confidence 843
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=58.05 Aligned_cols=69 Identities=25% Similarity=0.313 Sum_probs=48.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEE-EEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFV-LVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|.|+| +|.+|..+++.|.+.|++|++ ..|+ +++.+.+.. ..++.... .+. +.++++|+||.
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~-----~~~~~~l~~--~~g~~~~~---~~~----~~~~~aDvVil 87 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRG-----PASLSSVTD--RFGASVKA---VEL----KDALQADVVIL 87 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTC-----GGGGHHHHH--HHTTTEEE---CCH----HHHTTSSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCC-----HHHHHHHHH--HhCCCccc---ChH----HHHhcCCEEEE
Confidence 68999999 899999999999999999998 7777 334322211 11332222 122 23578999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+.+..
T Consensus 88 avp~~ 92 (220)
T 4huj_A 88 AVPYD 92 (220)
T ss_dssp ESCGG
T ss_pred eCChH
Confidence 98754
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00032 Score=56.60 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=55.7
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEE-EEcCCCCCCCch-hhHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFV-LVRESTLSAPSK-SQLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~-~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|+ ||+|+|+|+ |.+|+.+++.+.++++++.+ ++|+......-+ ...++.+. ...+ ..|++.++...+.++
T Consensus 1 M~-MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~--~~DV-vIDft~p~a~~~~~~l~~ 75 (243)
T 3qy9_A 1 MA-SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK--GADV-AIDFSNPNLLFPLLDEDF 75 (243)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT--TCSE-EEECSCHHHHHHHHTSCC
T ss_pred CC-ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh--CCCE-EEEeCChHHHHHHHHHhc
Confidence 54 789999998 99999999999998777665 455432100000 00001111 2222 357888877665543
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHH
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
+..+|+.++|... .....+.++|++
T Consensus 76 g~~vVigTTG~s~-e~~~~l~~aa~~ 100 (243)
T 3qy9_A 76 HLPLVVATTGEKE-KLLNKLDELSQN 100 (243)
T ss_dssp CCCEEECCCSSHH-HHHHHHHHHTTT
T ss_pred CCceEeCCCCCCH-HHHHHHHHHHhc
Confidence 6788888887642 333445555543
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00058 Score=57.27 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=56.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++++|+|+ |..|+.++..|.+.|. +|+++.|+.+.. ++.+ ..+.+. ..+..+...++.+.+.+.+.+.++|+|
T Consensus 148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~--~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFF--EKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHH--HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchH--HHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 478999995 9999999999999997 799999983211 1121 122222 124445555676765566677789999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|++++..
T Consensus 225 INaTp~G 231 (312)
T 3t4e_A 225 TNGTKVG 231 (312)
T ss_dssp EECSSTT
T ss_pred EECCcCC
Confidence 9998754
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0016 Score=54.78 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=49.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|.|+| .|.||+.+++.|...|++|++.+|+.... .++.... ..+++.++++.+|+|+.+
T Consensus 139 g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 139 EFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSW-------------PGVESYV----GREELRAFLNQTRVLINL 200 (315)
T ss_dssp TCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhh-------------hhhhhhc----ccCCHHHHHhhCCEEEEe
Confidence 47999999 79999999999999999999999985421 1222111 235777788888888887
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+.+
T Consensus 201 ~Plt 204 (315)
T 3pp8_A 201 LPNT 204 (315)
T ss_dssp CCCC
T ss_pred cCCc
Confidence 7654
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00044 Score=59.17 Aligned_cols=73 Identities=18% Similarity=0.120 Sum_probs=46.8
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC-CCCEEE-EEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--C
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA-GHPTFV-LVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--Q 76 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~ 76 (310)
|++|++|.|+| +|.+|+..++.|.+. +.+|++ .+|+ +++.... ....++... ++++++++ +
T Consensus 1 M~~~~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~--a~~~g~~~~-------~~~~~~l~~~~ 65 (344)
T 3euw_A 1 MSLTLRIALFG-AGRIGHVHAANIAANPDLELVVIADPF-----IEGAQRL--AEANGAEAV-------ASPDEVFARDD 65 (344)
T ss_dssp --CCEEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSS-----HHHHHHH--HHTTTCEEE-------SSHHHHTTCSC
T ss_pred CCCceEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCC-----HHHHHHH--HHHcCCcee-------CCHHHHhcCCC
Confidence 77788999999 599999999999886 567775 4555 3333211 112233322 23455666 7
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.+.+...
T Consensus 66 ~D~V~i~tp~~~ 77 (344)
T 3euw_A 66 IDGIVIGSPTST 77 (344)
T ss_dssp CCEEEECSCGGG
T ss_pred CCEEEEeCCchh
Confidence 899999887654
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0067 Score=50.29 Aligned_cols=85 Identities=20% Similarity=0.239 Sum_probs=57.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEE-EEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~-~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
.++|+|.|+||..|+.+++.+++.|++++ .+..+.... ...++.+. +++.++.+ ++|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~-----------~i~G~~vy-------~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM-----------EVLGVPVY-------DTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC-----------EETTEEEE-------SSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc-----------eECCEEee-------CCHHHHhhcCCCCEE
Confidence 57999999999999999999999998854 333321000 01122221 12344445 89999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+. ..+..+++.|.+.| ++.+|.
T Consensus 69 Ii~vp~---~~~~~~~~ea~~~G-i~~vVi 94 (288)
T 1oi7_A 69 IIFVPA---PAAADAALEAAHAG-IPLIVL 94 (288)
T ss_dssp EECCCH---HHHHHHHHHHHHTT-CSEEEE
T ss_pred EEecCH---HHHHHHHHHHHHCC-CCEEEE
Confidence 998885 45778888888888 885544
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0007 Score=57.51 Aligned_cols=90 Identities=21% Similarity=0.216 Sum_probs=56.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
++|.|.||||++|+.+++.|.++.|+ ++.++...+. ..+.. + .+.....-++.+ ..++++|+||
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a--G~~~~----~--~~~~~~~~~~~~-----~~~~~~Dvvf 68 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQ--GRKLA----F--RGQEIEVEDAET-----ADPSGLDIAL 68 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS--SCEEE----E--TTEEEEEEETTT-----SCCTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccC--CCcee----e--cCCceEEEeCCH-----HHhccCCEEE
Confidence 68999999999999999999988654 5555433211 11110 1 122222223322 2356899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
.+++.. .+......+.+.| ++.+-.|
T Consensus 69 ~a~~~~---~s~~~a~~~~~~G-~~vID~S 94 (344)
T 3tz6_A 69 FSAGSA---MSKVQAPRFAAAG-VTVIDNS 94 (344)
T ss_dssp ECSCHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred ECCChH---HHHHHHHHHHhCC-CEEEECC
Confidence 999854 4667777777878 6544444
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=3.7e-05 Score=63.98 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=33.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|..+++|.|+| +|.+|+.++..|.+.|++|++.+|+
T Consensus 1 Mm~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 1 MTGITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 55578999998 6999999999999999999999998
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00025 Score=59.95 Aligned_cols=67 Identities=25% Similarity=0.348 Sum_probs=49.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|+|.|+| .|.+|+.++..|.+.|++|+++.|+ +++.+ .+...++.. ..+ ..++++++|+||.+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~---~~~~~g~~~----~~~---~~~~~~~~DvVi~a 93 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRT-----AEKCD---LFIQEGARL----GRT---PAEVVSTCDITFAC 93 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----GGGGH---HHHHTTCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCC-----HHHHH---HHHHcCCEE----cCC---HHHHHhcCCEEEEe
Confidence 47899999 6999999999999999999999998 33332 232334432 123 33456789999999
Q ss_pred ccc
Q 021596 84 VGH 86 (310)
Q Consensus 84 a~~ 86 (310)
.+.
T Consensus 94 v~~ 96 (316)
T 2uyy_A 94 VSD 96 (316)
T ss_dssp CSS
T ss_pred CCC
Confidence 883
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00025 Score=60.44 Aligned_cols=89 Identities=17% Similarity=0.274 Sum_probs=60.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCC-HHHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLN-HESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d-~~~~~~~~~--~~d~ 79 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +.. ++..+-.+ .+.+.+... ++|+
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST-----DEKLKIAKEY---GAEYLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCcEEEeCCCchHHHHHHHHhCCCCceE
Confidence 3689999999999999999999999999999998 5555544443 432 33222122 334444443 6999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||++++. ......++.++..|
T Consensus 221 vid~~g~---~~~~~~~~~l~~~G 241 (334)
T 3qwb_A 221 SFDSVGK---DTFEISLAALKRKG 241 (334)
T ss_dssp EEECCGG---GGHHHHHHHEEEEE
T ss_pred EEECCCh---HHHHHHHHHhccCC
Confidence 9999985 23444555555444
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00018 Score=58.87 Aligned_cols=71 Identities=21% Similarity=0.304 Sum_probs=49.5
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
|.||+|.|+| +|.+|+.+++.|.+.|++|.+.+|+ +++.+.+.. ..++.. ..+ +.++++++|+||
T Consensus 1 ~~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~--~~g~~~----~~~---~~~~~~~~D~Vi 65 (259)
T 2ahr_A 1 SNAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAE--QLALPY----AMS---HQDLIDQVDLVI 65 (259)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHH--HHTCCB----CSS---HHHHHHTCSEEE
T ss_pred CCccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC-----HHHHHHHHH--HcCCEe----eCC---HHHHHhcCCEEE
Confidence 3478999999 7999999999999999999999888 444322211 113321 223 345567899999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
.+.+..
T Consensus 66 ~~v~~~ 71 (259)
T 2ahr_A 66 LGIKPQ 71 (259)
T ss_dssp ECSCGG
T ss_pred EEeCcH
Confidence 999843
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00024 Score=58.60 Aligned_cols=72 Identities=18% Similarity=0.274 Sum_probs=48.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++++|+|+ |.+|+.++..|.+.|.+|+++.|+ +++.+.+ +.+...+ .+...|+ +++.+ .++|+||+
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~-----~~~~~~la~~~~~~~-~~~~~~~---~~~~~--~~~DivVn 186 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTG-SIQALSM---DELEG--HEFDLIIN 186 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGS-SEEECCS---GGGTT--CCCSEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHhhccC-CeeEecH---HHhcc--CCCCEEEE
Confidence 478999997 789999999999999999999998 4443222 2222111 1222333 22222 57999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 187 ~t~~~ 191 (271)
T 1nyt_A 187 ATSSG 191 (271)
T ss_dssp CCSCG
T ss_pred CCCCC
Confidence 99865
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00035 Score=60.52 Aligned_cols=75 Identities=23% Similarity=0.184 Sum_probs=54.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|+ |.+|+.+++.+...|.+|++++|+ +.+.+.++.. .+..+ ..+..+.+++.+++.++|+||.+
T Consensus 168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~-----~~~l~~~~~~--~g~~~-~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDIN-----IDKLRQLDAE--FCGRI-HTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH--TTTSS-EEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHh--cCCee-EeccCCHHHHHHHHcCCCEEEEC
Confidence 468999997 999999999999999999999998 4444333321 12221 12334566788888899999998
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 239 ~~~p 242 (377)
T 2vhw_A 239 VLVP 242 (377)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 8643
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.41 E-value=7.1e-05 Score=66.38 Aligned_cols=77 Identities=18% Similarity=0.319 Sum_probs=49.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc----CCcE-EE-----EccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN----LGVN-FV-----VGDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~----~~~~-~v-----~~D~~d~~~~~~~~ 74 (310)
|+|.|+| +|++|..++..|.+.|++|++++|+ +++.+.+..-.. ++.+ .+ .+.+.-..++.+++
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~-----~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~ 76 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTD-----RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV 76 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHG
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECC-----HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHH
Confidence 7999998 6999999999999999999999998 444433222000 0000 00 01111112345567
Q ss_pred cCCCEEEEcccch
Q 021596 75 KQVDVVISTVGHA 87 (310)
Q Consensus 75 ~~~d~Vi~~a~~~ 87 (310)
+++|+||.+++..
T Consensus 77 ~~aDvViiaVptp 89 (450)
T 3gg2_A 77 PEADIIFIAVGTP 89 (450)
T ss_dssp GGCSEEEECCCCC
T ss_pred hcCCEEEEEcCCC
Confidence 8899999998754
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00088 Score=55.48 Aligned_cols=80 Identities=26% Similarity=0.269 Sum_probs=55.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|. +|+|.|+| .|.+|+.++..|.+.|+ +|++..|+ +++.+ .+.. .++... . +..+++++
T Consensus 1 M~-~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~-----~~~~~---~l~~~~gi~~~----~---~~~~~~~~ 63 (280)
T 3tri_A 1 MN-TSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRS-----LDKLD---FFKEKCGVHTT----Q---DNRQGALN 63 (280)
T ss_dssp -C-CSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSS-----SHHHH---HHHHTTCCEEE----S---CHHHHHSS
T ss_pred CC-CCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCC-----HHHHH---HHHHHcCCEEe----C---ChHHHHhc
Confidence 43 58999999 59999999999999998 89999998 44442 2322 255432 1 23456789
Q ss_pred CCEEEEcccchhhhhHHHHHHHHH
Q 021596 77 VDVVISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
+|+||.+..+.. ...+++..+
T Consensus 64 aDvVilav~p~~---~~~vl~~l~ 84 (280)
T 3tri_A 64 ADVVVLAVKPHQ---IKMVCEELK 84 (280)
T ss_dssp CSEEEECSCGGG---HHHHHHHHH
T ss_pred CCeEEEEeCHHH---HHHHHHHHH
Confidence 999999997543 344444444
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0005 Score=58.93 Aligned_cols=90 Identities=19% Similarity=0.288 Sum_probs=55.5
Q ss_pred ceEEEEccCcchhHHHHH-HHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVE-ASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~-~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+|.|.||||++|+.+++ .|.++.+ +++.++.+... .+. ..+...... .-+..+.+. ++++|+|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG---~~~---~~~~~~~~~--~~~~~~~~~----~~~~Dvv 68 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG---VPA---PNFGKDAGM--LHDAFDIES----LKQLDAV 68 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT---SBC---CCSSSCCCB--CEETTCHHH----HTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC---cCH---HHhCCCceE--EEecCChhH----hccCCEE
Confidence 689999999999999999 7777663 45555433211 111 011111111 123334443 5799999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCcc-EEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
|.++|.. .+...+..+.+.| ++ ++|-
T Consensus 69 f~a~~~~---~s~~~~~~~~~~G-~k~~VID 95 (370)
T 3pzr_A 69 ITCQGGS---YTEKVYPALRQAG-WKGYWID 95 (370)
T ss_dssp EECSCHH---HHHHHHHHHHHTT-CCCEEEE
T ss_pred EECCChH---HHHHHHHHHHHCC-CCEEEEe
Confidence 9999864 4667777777778 75 4444
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00049 Score=50.40 Aligned_cols=83 Identities=19% Similarity=0.263 Sum_probs=57.5
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++|+|+|+| |.+|..+++.|++.|++|+.+.++.. . -.|+... .++.++.+.+|+|
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~-----------~--i~G~~~~-------~s~~el~~~vDlv 73 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD-----------E--IEGLKCY-------RSVRELPKDVDVI 73 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----------E--ETTEECB-------SSGGGSCTTCCEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC-----------e--ECCeeec-------CCHHHhCCCCCEE
Confidence 5789999987 89999999999999998777665521 0 1132211 1222334579999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+. .....+++.|.+.| ++.++.
T Consensus 74 ii~vp~---~~v~~v~~~~~~~g-~~~i~~ 99 (138)
T 1y81_A 74 VFVVPP---KVGLQVAKEAVEAG-FKKLWF 99 (138)
T ss_dssp EECSCH---HHHHHHHHHHHHTT-CCEEEE
T ss_pred EEEeCH---HHHHHHHHHHHHcC-CCEEEE
Confidence 999884 45666777777778 877665
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00053 Score=58.59 Aligned_cols=88 Identities=16% Similarity=0.310 Sum_probs=58.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCH-HHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNH-ESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~-~~~~~~~~--~~d~ 79 (310)
..+|+|+||+|.+|..+++.+...|.+|++++++ +++.+.++.+ +. .++..+ .+. +.+.++.. ++|+
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR-----TAATEFVKSV---GADIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCcEEecCc-hhHHHHHHHHhCCCCceE
Confidence 3689999999999999999999999999999998 5565555544 33 333333 332 34444443 5999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||++++.. .....++.++..|
T Consensus 231 vid~~g~~---~~~~~~~~l~~~G 251 (342)
T 4eye_A 231 VVDPIGGP---AFDDAVRTLASEG 251 (342)
T ss_dssp EEESCC-----CHHHHHHTEEEEE
T ss_pred EEECCchh---HHHHHHHhhcCCC
Confidence 99999853 2334444444333
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00065 Score=57.34 Aligned_cols=87 Identities=20% Similarity=0.229 Sum_probs=57.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhH-hHhhhc-----CCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL-LDHFKN-----LGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~~~~~~~ 75 (310)
+++|.|+|+ |.+|+.++..|+..|. +|++++++ +.+.+- ...+.+ .++.+...|. ++++
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~-----~~k~~g~a~DL~~~~~~~~~~~i~~~~~-------~a~~ 75 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF-----KDKTKGDAIDLEDALPFTSPKKIYSAEY-------SDAK 75 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHTTGGGSCCCEEEECCG-------GGGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC-----hHHHHHHHhhHhhhhhhcCCcEEEECcH-------HHhc
Confidence 579999995 9999999999999885 79999887 333321 111211 2344443332 3578
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|+||.++|... ....+.+.+++.+..
T Consensus 76 ~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 116 (326)
T 3vku_A 76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG 116 (326)
T ss_dssp TCSEEEECCCCC----------------CHHHHHHHHHTTT
T ss_pred CCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998643 333456666766654
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00026 Score=60.08 Aligned_cols=89 Identities=16% Similarity=0.206 Sum_probs=59.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCC-HHHHHHHhc--CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLN-HESLVNAIK--QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d-~~~~~~~~~--~~d~ 79 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +. .++..+-.+ .+.+.+... ++|+
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS-----PEKAAHAKAL---GAWETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCEEEeCCCccHHHHHHHHhCCCCceE
Confidence 3689999999999999999999999999999998 5566555544 33 233222122 234444443 6999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||++++.. .....++.++..|
T Consensus 213 vid~~g~~---~~~~~~~~l~~~G 233 (325)
T 3jyn_A 213 VYDGVGQD---TWLTSLDSVAPRG 233 (325)
T ss_dssp EEESSCGG---GHHHHHTTEEEEE
T ss_pred EEECCChH---HHHHHHHHhcCCC
Confidence 99999852 2334444444433
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0018 Score=57.53 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=72.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
.++|+|.| .|.+|.++++.| +++++|.++-++ .++++.+... -++..++.||-+|++-|.++ ++.+|+++.
T Consensus 235 ~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d-----~~r~~~la~~-l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia 306 (461)
T 4g65_A 235 YRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERN-----LQRAEKLSEE-LENTIVFCGDAADQELLTEENIDQVDVFIA 306 (461)
T ss_dssp CCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESC-----HHHHHHHHHH-CTTSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred ccEEEEEc-chHHHHHHHHHh-hhcCceEEEecC-----HHHHHHHHHH-CCCceEEeccccchhhHhhcCchhhcEEEE
Confidence 36899999 599999999997 456899999988 5555443332 25788999999999988876 558999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++... ...-..-.|++.| +++.+.
T Consensus 307 ~T~~De--~Ni~~~llAk~~g-v~kvIa 331 (461)
T 4g65_A 307 LTNEDE--TNIMSAMLAKRMG-AKKVMV 331 (461)
T ss_dssp CCSCHH--HHHHHHHHHHHTT-CSEEEE
T ss_pred cccCcH--HHHHHHHHHHHcC-Cccccc
Confidence 988653 2233344567788 899875
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.35 E-value=7.3e-05 Score=66.78 Aligned_cols=36 Identities=25% Similarity=0.274 Sum_probs=33.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRE 37 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~ 37 (310)
|..||+|.|+| .|.+|..++..|.+. |++|++++|+
T Consensus 2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 66678999998 799999999999999 7999999998
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00015 Score=61.59 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=53.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEE---EEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTF---VLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~---~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
|+|+|.||+|.+|+.+++.|.+++|++. .+..... . . +.+.-.+..+...+. +++ . + ++|+||
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~-~-g------~~l~~~g~~i~v~~~-~~~---~-~-~~DvV~ 66 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRS-A-G------VRLAFRGEEIPVEPL-PEG---P-L-PVDLVL 66 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGG-S-S------CEEEETTEEEEEEEC-CSS---C-C-CCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeecccc-C-C------CEEEEcCceEEEEeC-Chh---h-c-CCCEEE
Confidence 5899999999999999999998776543 2221100 0 0 011111112212222 222 1 4 899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.++|.. .+........+.| ++.+-.|+
T Consensus 67 ~a~g~~---~s~~~a~~~~~~G-~~vId~s~ 93 (331)
T 2yv3_A 67 ASAGGG---ISRAKALVWAEGG-ALVVDNSS 93 (331)
T ss_dssp ECSHHH---HHHHHHHHHHHTT-CEEEECSS
T ss_pred ECCCcc---chHHHHHHHHHCC-CEEEECCC
Confidence 999854 4566666777778 65554443
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00078 Score=57.91 Aligned_cols=91 Identities=14% Similarity=0.288 Sum_probs=56.6
Q ss_pred CceEEEEccCcchhHHHHH-HHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVE-ASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~-~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.++|.|+||||++|+.+++ .|.++.+ +++.++.+.. ..+. ..+... ....-++.+.+. ++++|+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a---G~~~---~~~~~~--~~~v~~~~~~~~----~~~vDv 71 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNA---GGKA---PSFAKN--ETTLKDATSIDD----LKKCDV 71 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCT---TSBC---CTTCCS--CCBCEETTCHHH----HHTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhc---CCCH---HHcCCC--ceEEEeCCChhH----hcCCCE
Confidence 5799999999999999999 7777663 4555543311 1111 011111 111223444444 468999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCcc-EEcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVT-RFFP 110 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~-~~v~ 110 (310)
||.+++.. .+..++..+.+.| ++ ++|-
T Consensus 72 vf~a~~~~---~s~~~~~~~~~~G-~k~~VID 99 (377)
T 3uw3_A 72 IITCQGGD---YTNDVFPKLRAAG-WNGYWID 99 (377)
T ss_dssp EEECSCHH---HHHHHHHHHHHTT-CCSEEEE
T ss_pred EEECCChH---HHHHHHHHHHHCC-CCEEEEe
Confidence 99999864 4667777777888 75 4554
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00072 Score=57.53 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=56.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH-HHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE-SLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~-~~~~~~~~~d~Vi~ 82 (310)
+++|.|+| .|.+|..+++.|.+.|++|++.+|+ +++.+ .....++.. ..+.+ .+..+.+++|+||.
T Consensus 8 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~-----~~~~~---~a~~~G~~~----~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 8 SRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRS-----RSGAK---SAVDEGFDV----SADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSC-----HHHHH---HHHHTTCCE----ESCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHHcCCee----eCCHHHHHHhcccCCCEEEE
Confidence 57999998 7999999999999999999999998 43432 223345532 12433 34445567899999
Q ss_pred cccchhhhhHHHHHHHHHH
Q 021596 83 TVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~ 101 (310)
+++.. ....+++....
T Consensus 75 avP~~---~~~~vl~~l~~ 90 (341)
T 3ktd_A 75 AVPMT---AIDSLLDAVHT 90 (341)
T ss_dssp CSCHH---HHHHHHHHHHH
T ss_pred eCCHH---HHHHHHHHHHc
Confidence 99954 33444444433
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00039 Score=59.35 Aligned_cols=75 Identities=17% Similarity=0.260 Sum_probs=53.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC---HHHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN---HESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~~~~~~~--~~d 78 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +...+ .|..+ .+.+.+... ++|
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---ga~~~-~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN-----NKHTEELLRL---GAAYV-IDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhC---CCcEE-EeCCcccHHHHHHHHhCCCCCc
Confidence 3689999999999999999999999999999998 4455555544 33222 23333 233444443 699
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||+++|..
T Consensus 216 vvid~~g~~ 224 (340)
T 3gms_A 216 AAIDSIGGP 224 (340)
T ss_dssp EEEESSCHH
T ss_pred EEEECCCCh
Confidence 999999864
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00038 Score=59.80 Aligned_cols=88 Identities=18% Similarity=0.280 Sum_probs=58.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHh-cCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAI-KQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~-~~~d~ 79 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +...+ .|..+. +.+.++. .++|+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~~-~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS-----TGKCEACERL---GAKRG-INYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHHSSCEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EeCCchHHHHHHHHHhCCCceE
Confidence 3689999999999999999999999999999998 5566555544 33222 233332 2333333 26999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||++++.. .....++.++..|
T Consensus 239 vid~~g~~---~~~~~~~~l~~~G 259 (353)
T 4dup_A 239 ILDMIGAA---YFERNIASLAKDG 259 (353)
T ss_dssp EEESCCGG---GHHHHHHTEEEEE
T ss_pred EEECCCHH---HHHHHHHHhccCC
Confidence 99999853 2333444444333
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00017 Score=61.95 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=56.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
+|+|.|+| +|.+|..++..|.+.|++|++..|+ +++.+.+.... .+++.+ ...+.-..++.++++++|
T Consensus 29 ~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~-----~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aD 101 (356)
T 3k96_A 29 KHPIAILG-AGSWGTALALVLARKGQKVRLWSYE-----SDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVT 101 (356)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSC-----HHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCC
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCC
Confidence 57999999 6999999999999999999999998 44443332211 112211 000100123456778999
Q ss_pred EEEEcccchhhhhHHHHHHHHHH
Q 021596 79 VVISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
+||.+.+.. ....+++....
T Consensus 102 vVilaVp~~---~~~~vl~~i~~ 121 (356)
T 3k96_A 102 DILIVVPSF---AFHEVITRMKP 121 (356)
T ss_dssp EEEECCCHH---HHHHHHHHHGG
T ss_pred EEEECCCHH---HHHHHHHHHHH
Confidence 999998754 34444444443
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00049 Score=56.60 Aligned_cols=71 Identities=15% Similarity=0.245 Sum_probs=48.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+ +++.+.+ +.+...++..+ ++.+.+ . .++|+||
T Consensus 120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~--~~~~l~---~--~~~DivI 186 (272)
T 3pwz_A 120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRD-----MAKALALRNELDHSRLRIS--RYEALE---G--QSFDIVV 186 (272)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHCCTTEEEE--CSGGGT---T--CCCSEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhccCCeeEe--eHHHhc---c--cCCCEEE
Confidence 478999995 8999999999999995 89999998 4444322 22222123332 332221 1 5799999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
++++..
T Consensus 187 naTp~g 192 (272)
T 3pwz_A 187 NATSAS 192 (272)
T ss_dssp ECSSGG
T ss_pred ECCCCC
Confidence 988754
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00035 Score=58.38 Aligned_cols=67 Identities=19% Similarity=0.328 Sum_probs=49.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|+.++..|.+.|++|++..|+ +++. +.+...++.+. .+ ..++++++|+|+.+.
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~---~~~~~~g~~~~----~~---~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVF-----PDAC---KEFQDAGEQVV----SS---PADVAEKADRIITML 64 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSS-----THHH---HHHHTTTCEEC----SS---HHHHHHHCSEEEECC
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHcCCeec----CC---HHHHHhcCCEEEEeC
Confidence 5799998 7999999999999999999999998 4444 33333454321 23 344566799999998
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 65 p~~ 67 (296)
T 2gf2_A 65 PTS 67 (296)
T ss_dssp SSH
T ss_pred CCH
Confidence 643
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00028 Score=58.88 Aligned_cols=68 Identities=24% Similarity=0.292 Sum_probs=46.9
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.||+|.|+| .|.+|+.++..|.+.|++|+++. +.. +. +.+...++.. . +++.++++++|+|+.
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~-----~~---~~~~~~g~~~----~---~~~~~~~~~~D~vi~ 64 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGP-----VA---DELLSLGAVN----V---ETARQVTEFADIIFI 64 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSC-----CC---HHHHTTTCBC----C---SSHHHHHHTCSEEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHH-----HH---HHHHHcCCcc----c---CCHHHHHhcCCEEEE
Confidence 468999998 79999999999999999998877 532 22 2222223321 1 234456678999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 65 ~vp~~ 69 (295)
T 1yb4_A 65 MVPDT 69 (295)
T ss_dssp CCSSH
T ss_pred ECCCH
Confidence 98654
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00098 Score=56.22 Aligned_cols=90 Identities=17% Similarity=0.248 Sum_probs=58.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhH-hHhhhc-----CCcEEEEccCCCHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQL-LDHFKN-----LGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~~~~ 72 (310)
|.+.+||.|+|| |.+|..++..|+..+. +|++++++ +++.+. ...+.+ ..+.+.. | + .+
T Consensus 2 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~ 68 (318)
T 1ez4_A 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYS-G--E----YS 68 (318)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GG
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCeEEEE-C--C----HH
Confidence 444589999997 9999999999998875 79999987 333321 122222 2333332 2 2 34
Q ss_pred HhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 73 AIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
+++++|+|+.+++... ....+.+++.+.+..
T Consensus 69 a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~ 112 (318)
T 1ez4_A 69 DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG 112 (318)
T ss_dssp GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5889999999998654 233445666666653
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00076 Score=56.99 Aligned_cols=73 Identities=22% Similarity=0.259 Sum_probs=49.6
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhH-hHhhhc------CCcEEEE-ccCCCHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQL-LDHFKN------LGVNFVV-GDVLNHESLV 71 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~-~~~l~~------~~~~~v~-~D~~d~~~~~ 71 (310)
|+.+++|.|+|| |.+|..++..|...|+ +|++++++. ++.+- ...+.. ....+.. .| +
T Consensus 1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~-----~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~- 67 (322)
T 1t2d_A 1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK-----NMPHGKALDTSHTNVMAYSNCKVSGSNT------Y- 67 (322)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHTHHHHHTCCCCEEEECC------G-
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHHHHhhhhhcCCCcEEEECCC------H-
Confidence 777789999997 9999999999999997 888888873 33321 111111 1222222 23 2
Q ss_pred HHhcCCCEEEEcccc
Q 021596 72 NAIKQVDVVISTVGH 86 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~ 86 (310)
++++++|+||.+++.
T Consensus 68 ~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 68 DDLAGADVVIVTAGF 82 (322)
T ss_dssp GGGTTCSEEEECCSC
T ss_pred HHhCCCCEEEEeCCC
Confidence 458899999999854
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.30 E-value=7.2e-05 Score=62.02 Aligned_cols=75 Identities=23% Similarity=0.241 Sum_probs=53.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-Hhhhc--CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKN--LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~--~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+ +++.+.+ +.+.. +++.+...++.+ +.+.+.++|+
T Consensus 127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~~Di 197 (283)
T 3jyo_A 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVGVDARG---IEDVIAAADG 197 (283)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS-----HHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHHSSE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhcCCE
Confidence 478999996 8999999999999997 69999998 4444322 23321 234444445433 4556778999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||++++..
T Consensus 198 VInaTp~G 205 (283)
T 3jyo_A 198 VVNATPMG 205 (283)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998753
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00028 Score=59.55 Aligned_cols=71 Identities=24% Similarity=0.190 Sum_probs=50.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||+|.|+| .|.+|..+++.|.+.|+ +|++..|+.+ +.+. +.+...++... . +..++++++|+||.
T Consensus 24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~---~~~~---~~~~~~g~~~~----~---~~~e~~~~aDvVi~ 89 (312)
T 3qsg_A 24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASA---ESWR---PRAEELGVSCK----A---SVAEVAGECDVIFS 89 (312)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCH---HHHH---HHHHHTTCEEC----S---CHHHHHHHCSEEEE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCC---HHHH---HHHHHCCCEEe----C---CHHHHHhcCCEEEE
Confidence 68999998 79999999999999999 9999999620 1222 33334454431 2 33456678999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
+.+...
T Consensus 90 ~vp~~~ 95 (312)
T 3qsg_A 90 LVTAQA 95 (312)
T ss_dssp CSCTTT
T ss_pred ecCchh
Confidence 998764
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00044 Score=59.20 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=53.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~ 77 (310)
..+|+|+||+|.+|..+++.+... |.+|++++|+ +++.+.++.+ +...+ .|..+. +.+.++.. ++
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYV-INASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC-----HHHHHHHHHh---CCCEE-ecCCCccHHHHHHHHhcCCCc
Confidence 368999999989999999999999 9999999988 5555444443 33221 244333 33555553 69
Q ss_pred CEEEEcccch
Q 021596 78 DVVISTVGHA 87 (310)
Q Consensus 78 d~Vi~~a~~~ 87 (310)
|+||++++..
T Consensus 242 d~vi~~~g~~ 251 (347)
T 1jvb_A 242 DAVIDLNNSE 251 (347)
T ss_dssp EEEEESCCCH
T ss_pred eEEEECCCCH
Confidence 9999999854
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0012 Score=56.80 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=65.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh----c--C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI----K--Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~----~--~ 76 (310)
..+|||+|+ |.+|...++.+...|.+ |++++++ +++.+.++.+ ...+.....|-.+.+++.+.+ . +
T Consensus 180 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 180 GDPVLICGA-GPIGLITMLCAKAAGACPLVITDID-----EGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESC-----HHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCC
Confidence 358999997 99999999999999986 8888888 6677777777 444444445544444444333 2 6
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+|+||.+++... .....++.++..| +++.
T Consensus 253 ~Dvvid~~g~~~--~~~~~~~~l~~~G---~iv~ 281 (363)
T 3m6i_A 253 PAVALECTGVES--SIAAAIWAVKFGG---KVFV 281 (363)
T ss_dssp CSEEEECSCCHH--HHHHHHHHSCTTC---EEEE
T ss_pred CCEEEECCCChH--HHHHHHHHhcCCC---EEEE
Confidence 999999998542 2334455555444 5554
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0006 Score=57.11 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=52.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| .|.+|+.+++.|...|.+|++..|+ +.+.. .+...+++.+. .+++.++++++|+|+.+
T Consensus 157 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~-----~~~~~---~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 157 GSQVAVLG-LGRTGMTIARTFAALGANVKVGARS-----SAHLA---RITEMGLVPFH-----TDELKEHVKDIDICINT 222 (300)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHH---HHHHTTCEEEE-----GGGHHHHSTTCSEEEEC
T ss_pred CCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECC-----HHHHH---HHHHCCCeEEc-----hhhHHHHhhCCCEEEEC
Confidence 47999999 5999999999999999999999998 43332 22223554432 24567788899999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 223 ~p~~ 226 (300)
T 2rir_A 223 IPSM 226 (300)
T ss_dssp CSSC
T ss_pred CChh
Confidence 8864
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.023 Score=47.20 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=56.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
..+++|.|+||..|+.+++.|++.|++++ ..-++.... .+ -.++.++ . ++.++.+ ++|+++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~~V-~~VnP~~~g-------~~--i~G~~vy----~---sl~el~~~~~~Dv~i 75 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGTKIV-GGVTPGKGG-------QN--VHGVPVF----D---TVKEAVKETDANASV 75 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTCCEE-EEECTTCTT-------CE--ETTEEEE----S---SHHHHHHHHCCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCeEE-EEeCCCCCC-------ce--ECCEeee----C---CHHHHhhcCCCCEEE
Confidence 35788889999999999999999998843 333322100 00 1233221 2 3344445 899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.+.. .+..+++.|.+.| ++.+|.
T Consensus 76 i~vp~~---~~~~~v~ea~~~G-i~~vVi 100 (294)
T 2yv1_A 76 IFVPAP---FAKDAVFEAIDAG-IELIVV 100 (294)
T ss_dssp ECCCHH---HHHHHHHHHHHTT-CSEEEE
T ss_pred EccCHH---HHHHHHHHHHHCC-CCEEEE
Confidence 988854 5778888888888 885553
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00068 Score=58.50 Aligned_cols=92 Identities=23% Similarity=0.276 Sum_probs=63.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
.+|+|+|+ |.+|..+++.+...|.+|++++++ +.+.+.+. +..+...+ .|..+.+.+.++..++|+||+++
T Consensus 189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~--~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~ 259 (366)
T 1yqd_A 189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTS-----PSKKEEAL--KNFGADSF-LVSRDQEQMQAAAGTLDGIIDTV 259 (366)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGHHHHH--HTSCCSEE-EETTCHHHHHHTTTCEEEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH--HhcCCceE-EeccCHHHHHHhhCCCCEEEECC
Confidence 58999995 999999999999999999999988 44443222 13344322 36667777777777899999999
Q ss_pred cchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 85 GHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+... .....++.++..| +++.
T Consensus 260 g~~~--~~~~~~~~l~~~G---~iv~ 280 (366)
T 1yqd_A 260 SAVH--PLLPLFGLLKSHG---KLIL 280 (366)
T ss_dssp SSCC--CSHHHHHHEEEEE---EEEE
T ss_pred CcHH--HHHHHHHHHhcCC---EEEE
Confidence 8542 1234445554433 4544
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00067 Score=56.63 Aligned_cols=70 Identities=19% Similarity=0.266 Sum_probs=52.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| .|.+|+.+++.|...|.+|+++.|+ +.+.. .+...+++.+. .+++.++++++|+|+.+
T Consensus 155 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~-----~~~~~---~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 155 GANVAVLG-LGRVGMSVARKFAALGAKVKVGARE-----SDLLA---RIAEMGMEPFH-----ISKAAQELRDVDVCINT 220 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHH---HHHHTTSEEEE-----GGGHHHHTTTCSEEEEC
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECC-----HHHHH---HHHHCCCeecC-----hhhHHHHhcCCCEEEEC
Confidence 47999999 6999999999999999999999998 33332 22234555432 24567788899999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 221 ~p~~ 224 (293)
T 3d4o_A 221 IPAL 224 (293)
T ss_dssp CSSC
T ss_pred CChH
Confidence 8764
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00048 Score=50.98 Aligned_cols=85 Identities=11% Similarity=0.074 Sum_probs=57.5
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+++|+|+|++ |.+|..+++.|++.|++|+.+.++.... + -.|+... .++.+ +.+++|+|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~---~--------i~G~~~~-~sl~e------l~~~~Dlv 74 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK---T--------LLGQQGY-ATLAD------VPEKVDMV 74 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS---E--------ETTEECC-SSTTT------CSSCCSEE
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc---c--------cCCeecc-CCHHH------cCCCCCEE
Confidence 4689999998 8899999999999999977766552101 0 1132211 22322 33479999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+. .....+++.|.+.| ++.++.
T Consensus 75 ii~vp~---~~v~~v~~~~~~~g-~~~i~i 100 (145)
T 2duw_A 75 DVFRNS---EAAWGVAQEAIAIG-AKTLWL 100 (145)
T ss_dssp ECCSCS---THHHHHHHHHHHHT-CCEEEC
T ss_pred EEEeCH---HHHHHHHHHHHHcC-CCEEEE
Confidence 999884 35566677777778 888766
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00033 Score=57.77 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=49.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++++|+|+ |..|+.++..|.+.|. +|+++.|+. ++. +.+.. .+.. ...+++.+++.++|+||+
T Consensus 117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~-----~~a---~~la~-~~~~-----~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTM-----SRF---NNWSL-NINK-----INLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCG-----GGG---TTCCS-CCEE-----ECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH-----HHH---HHHHH-hccc-----ccHhhHHHHhcCCCEEEE
Confidence 368999995 8999999999999998 899999983 333 22211 2222 135567777889999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 182 aTp~G 186 (277)
T 3don_A 182 TTPAG 186 (277)
T ss_dssp CCC--
T ss_pred CccCC
Confidence 98753
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.012 Score=48.78 Aligned_cols=86 Identities=19% Similarity=0.196 Sum_probs=57.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
.++|+|.|+||.+|+.+++.|.+.|++++... ++... . . + ..++.. +.+ +.++.+ ++|+++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~-g--~---~---~~G~~v----y~s---l~el~~~~~~D~vi 69 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKG-G--T---T---HLGLPV----FNT---VREAVAATGATASV 69 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCT-T--C---E---ETTEEE----ESS---HHHHHHHHCCCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCcc-c--c---e---eCCeec----cCC---HHHHhhcCCCCEEE
Confidence 57999999999999999999999898854333 21110 0 0 0 123222 223 344444 899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.+.. .+..+++.|.+.| ++.+|-
T Consensus 70 I~tP~~---~~~~~~~ea~~~G-i~~iVi 94 (288)
T 2nu8_A 70 IYVPAP---FCKDSILEAIDAG-IKLIIT 94 (288)
T ss_dssp ECCCGG---GHHHHHHHHHHTT-CSEEEE
T ss_pred EecCHH---HHHHHHHHHHHCC-CCEEEE
Confidence 998864 5778888888888 876443
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00041 Score=58.77 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=53.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC----CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
+|+|.|+| .|.+|..++..|.+.| ++|++..|+... .+. +.+...++.+. . + ..++++++|+
T Consensus 22 ~mkI~iIG-~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~---~~~---~~l~~~G~~~~-~---~---~~e~~~~aDv 87 (322)
T 2izz_A 22 SMSVGFIG-AGQLAFALAKGFTAAGVLAAHKIMASSPDMDL---ATV---SALRKMGVKLT-P---H---NKETVQHSDV 87 (322)
T ss_dssp CCCEEEES-CSHHHHHHHHHHHHTTSSCGGGEEEECSCTTS---HHH---HHHHHHTCEEE-S---C---HHHHHHHCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCCCcceEEEECCCccH---HHH---HHHHHcCCEEe-C---C---hHHHhccCCE
Confidence 57899999 6999999999999999 899999988320 133 22223355432 1 2 2345568999
Q ss_pred EEEcccchhhhhHHHHHHHHH
Q 021596 80 VISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
||.+..+. ....+++...
T Consensus 88 Vilav~~~---~~~~vl~~l~ 105 (322)
T 2izz_A 88 LFLAVKPH---IIPFILDEIG 105 (322)
T ss_dssp EEECSCGG---GHHHHHHHHG
T ss_pred EEEEeCHH---HHHHHHHHHH
Confidence 99999854 3444444443
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0033 Score=54.62 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=60.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| +|.+|..+++.+.+.|++|++++.+.... . . ...-..+..|+.|.+.+.++++.+|+|...
T Consensus 14 ~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~-~------~---~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 14 GKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSP-C------A---QVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCT-T------T---TTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCc-h------H---HhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 36899999 68999999999999999999998764321 0 0 112245668999999999999999998443
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
... ....+++.+.+.+
T Consensus 83 ~e~----~~~~~~~~l~~~g 98 (389)
T 3q2o_A 83 FEN----IDYRCLQWLEKHA 98 (389)
T ss_dssp CCC----CCHHHHHHHHHHS
T ss_pred ccc----ccHHHHHHHHhhC
Confidence 221 2234555666655
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00024 Score=59.11 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=47.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|.|+| .|.+|+.++..|.+ |++|+++.|+ +++.+.+. ..++... + ..++++++|+||.+
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~-----~~~~~~~~---~~g~~~~--~------~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRT-----FEKALRHQ---EEFGSEA--V------PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSS-----THHHHHHH---HHHCCEE--C------CGGGGGGCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHH---HCCCccc--C------HHHHHhCCCEEEEe
Confidence 57899998 69999999999999 9999999998 44443222 2233322 1 23456789999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 63 v~~~ 66 (289)
T 2cvz_A 63 LPTT 66 (289)
T ss_dssp CSSH
T ss_pred CCCh
Confidence 8854
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.002 Score=54.15 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=47.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhH-hHhhhc------CCcEEEE-ccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQL-LDHFKN------LGVNFVV-GDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~-~~~l~~------~~~~~v~-~D~~d~~~~~~~~~ 75 (310)
|+|.|+|| |.+|..++..|...|+ +|++++++. ++.+. ...+.+ ...++.. .| + ++++
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~-----~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~ 69 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE-----GVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTA 69 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc-----cHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHC
Confidence 79999997 9999999999999996 888888873 23321 122221 1222222 23 2 3578
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+||.+++...
T Consensus 70 ~aD~Vi~a~g~p~ 82 (309)
T 1ur5_A 70 NSDVIVVTSGAPR 82 (309)
T ss_dssp TCSEEEECCCC--
T ss_pred CCCEEEEcCCCCC
Confidence 9999999997643
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00094 Score=56.03 Aligned_cols=91 Identities=14% Similarity=0.125 Sum_probs=56.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhC-C--CCEEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA-G--HPTFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~-g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|||.|+||+|.+|+.++..|..+ + .++++++++. .. ....-.+.+.. ..+... .. +...++++++|+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~----~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDi 72 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT----PGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADV 72 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH----HHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc----hhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCE
Confidence 68999999999999999998875 5 4788888873 11 11122333322 222211 00 012346789999
Q ss_pred EEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 80 VISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
|+.++|... ....+.+.+++.+..
T Consensus 73 vii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~ 109 (312)
T 3hhp_A 73 VLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC 109 (312)
T ss_dssp EEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999998643 333455666666654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00095 Score=57.48 Aligned_cols=93 Identities=26% Similarity=0.270 Sum_probs=60.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCCH-HHHHHHh-cCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLNH-ESLVNAI-KQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~-~~~~~~~-~~~d~V 80 (310)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++. .++. ++..+-.+. +.+.+.. .++|+|
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~---~Ga~~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS-----DEKSAFLKS---LGCDRPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH---TTCSEEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHH---cCCcEEEecCChhHHHHHHHhcCCCCCEE
Confidence 3689999999999999999999999999999998 555544443 3443 232221222 2233322 268999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|++++. ......+++++..| +++.
T Consensus 236 id~~g~---~~~~~~~~~l~~~G---~iv~ 259 (362)
T 2c0c_A 236 YESVGG---AMFDLAVDALATKG---RLIV 259 (362)
T ss_dssp EECSCT---HHHHHHHHHEEEEE---EEEE
T ss_pred EECCCH---HHHHHHHHHHhcCC---EEEE
Confidence 999985 23344455554444 5544
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0009 Score=49.40 Aligned_cols=83 Identities=12% Similarity=0.156 Sum_probs=56.6
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+.+|+|+|++ |.+|..+++.|++.|++|+.+..+ .. . -.|+... .+ +.++...+|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~--~~---------~--i~G~~~y-~s------l~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK--YE---------E--VLGRKCY-PS------VLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT--CS---------E--ETTEECB-SS------GGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCC--CC---------e--ECCeecc-CC------HHHcCCCCCEE
Confidence 4689999998 899999999999999986555332 11 0 1122211 11 22233479999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+. .....+++.|.+.| ++.++.
T Consensus 82 vi~vp~---~~~~~vv~~~~~~g-i~~i~~ 107 (144)
T 2d59_A 82 DLFVKP---KLTMEYVEQAIKKG-AKVVWF 107 (144)
T ss_dssp EECSCH---HHHHHHHHHHHHHT-CSEEEE
T ss_pred EEEeCH---HHHHHHHHHHHHcC-CCEEEE
Confidence 998875 45677788888888 887765
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00085 Score=57.47 Aligned_cols=88 Identities=19% Similarity=0.320 Sum_probs=59.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCC-HHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLN-HESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d-~~~~~~~~~--~~d~V 80 (310)
.+|+|+||+|.+|...++.+...|.+|++++++ +++.+.++.+ ++ .++..+-.+ .+.+.++.. ++|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRR-----DEQIALLKDI---GAAHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESC-----GGGHHHHHHH---TCSEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 589999999999999999999999999999988 5566555544 33 233222122 233444433 79999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|++++... ....+++++..|
T Consensus 238 id~~g~~~---~~~~~~~l~~~G 257 (349)
T 3pi7_A 238 LDAVTGPL---ASAIFNAMPKRA 257 (349)
T ss_dssp EESSCHHH---HHHHHHHSCTTC
T ss_pred EECCCChh---HHHHHhhhcCCC
Confidence 99998542 344555555544
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00016 Score=64.01 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=30.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| +|++|..++..|.+.|++|++++|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 5899998 7999999999999999999999998
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00021 Score=60.83 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=51.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEc--CCCCCCCchhhHhHhhhcCCc------EEEEccCCCHHHHHHHhcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVR--ESTLSAPSKSQLLDHFKNLGV------NFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R--~~~~~~~~~~~~~~~l~~~~~------~~v~~D~~d~~~~~~~~~~ 76 (310)
|+|.|+| .|.+|+.++..|.+.|++|+++.| + +++. +.+...+. ++......+.+++.+++++
T Consensus 1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~-----~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (335)
T 1txg_A 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD-----TEIL---KSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN 71 (335)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG-----HHHH---HHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCC-----HHHH---HHHHHhCcCcccCccccceEEecHHhHHHHHhc
Confidence 5899999 599999999999999999999999 6 3333 22322221 1000012222345566789
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+||.+.....
T Consensus 72 ~D~vi~~v~~~~ 83 (335)
T 1txg_A 72 AEVVLLGVSTDG 83 (335)
T ss_dssp CSEEEECSCGGG
T ss_pred CCEEEEcCChHH
Confidence 999999998753
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0015 Score=55.08 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=48.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhH-hHhhhc------CCcEEEEccCCCHHHHHHHh
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL-LDHFKN------LGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~~~~~~ 74 (310)
+|+|.|+|| |.+|..++..|+..| .+|.+++++ +.+.+- ...+.+ ..+++.. | + .+++
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLD-----TEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDC 72 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSC-----HHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHh
Confidence 469999998 999999999999888 478888887 322321 111111 2333332 2 2 3458
Q ss_pred cCCCEEEEcccchh
Q 021596 75 KQVDVVISTVGHAL 88 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~ 88 (310)
+++|+|+.+++...
T Consensus 73 ~~aDvVvi~ag~~~ 86 (317)
T 3d0o_A 73 HDADLVVICAGAAQ 86 (317)
T ss_dssp TTCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 89999999998653
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00078 Score=57.85 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=47.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh--cC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI--KQ 76 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~--~~ 76 (310)
|.++++|.|+| +|.+|+..++.|.+. +++|+++ +|+ +++...... ..++.. ..| +++++ .+
T Consensus 2 M~~~~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~-----~~~~~~~~~--~~g~~~----~~~---~~~~l~~~~ 66 (354)
T 3db2_A 2 MYNPVGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRT-----EDKREKFGK--RYNCAG----DAT---MEALLARED 66 (354)
T ss_dssp CCCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSS-----HHHHHHHHH--HHTCCC----CSS---HHHHHHCSS
T ss_pred CCCcceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCC-----HHHHHHHHH--HcCCCC----cCC---HHHHhcCCC
Confidence 66668999999 599999999999886 6777654 555 333322111 113321 334 44555 36
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.+.+...
T Consensus 67 ~D~V~i~tp~~~ 78 (354)
T 3db2_A 67 VEMVIITVPNDK 78 (354)
T ss_dssp CCEEEECSCTTS
T ss_pred CCEEEEeCChHH
Confidence 899999887653
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0011 Score=56.50 Aligned_cols=68 Identities=24% Similarity=0.360 Sum_probs=48.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.|+|.|+| .|.||+.+++.|...|++|.+..|+.. ..+... ..+++.+ +++.++++.+|+|+.+
T Consensus 164 gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~-----~~~~~~---~~g~~~~-------~~l~ell~~aDvV~l~ 227 (351)
T 3jtm_A 164 GKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQM-----APELEK---ETGAKFV-------EDLNEMLPKCDVIVIN 227 (351)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCC-----CHHHHH---HHCCEEC-------SCHHHHGGGCSEEEEC
T ss_pred CCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCcc-----CHHHHH---hCCCeEc-------CCHHHHHhcCCEEEEC
Confidence 47999999 899999999999999999999998742 111111 2233221 2456677788888877
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 228 ~Plt 231 (351)
T 3jtm_A 228 MPLT 231 (351)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7753
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0026 Score=53.63 Aligned_cols=71 Identities=25% Similarity=0.295 Sum_probs=49.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhhc------CCcEEE-EccCCCHHHHHHHh
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKN------LGVNFV-VGDVLNHESLVNAI 74 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~~------~~~~~v-~~D~~d~~~~~~~~ 74 (310)
+++|.|+|+ |.+|..++..|...|+ +|++++++. ++.+ ....+.+ ....+. ..|. +++
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~-----~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-------~a~ 73 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAE-----GTPQGKGLDIAESSPVDGFDAKFTGANDY-------AAI 73 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHHHHHHHTCCCCEEEESSG-------GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCc-----hhHHHHHHHHhchhhhcCCCCEEEEeCCH-------HHH
Confidence 579999997 9999999999999998 999999983 3331 1111211 233333 2332 468
Q ss_pred cCCCEEEEcccch
Q 021596 75 KQVDVVISTVGHA 87 (310)
Q Consensus 75 ~~~d~Vi~~a~~~ 87 (310)
+++|+||.++|..
T Consensus 74 ~~aDiVIiaag~p 86 (324)
T 3gvi_A 74 EGADVVIVTAGVP 86 (324)
T ss_dssp TTCSEEEECCSCC
T ss_pred CCCCEEEEccCcC
Confidence 8999999999854
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.001 Score=56.80 Aligned_cols=87 Identities=18% Similarity=0.280 Sum_probs=57.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC-HHHHHHHhc--CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN-HESLVNAIK--QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~~~~~~~--~~d~V 80 (310)
..+|+|+||+|.+|..+++.+...|.+|+++ ++ +++.+.++.+ ++..+. +-.+ .+.+.++.. ++|+|
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~-----~~~~~~~~~l---Ga~~i~-~~~~~~~~~~~~~~~~g~D~v 220 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR-----GSDLEYVRDL---GATPID-ASREPEDYAAEHTAGQGFDLV 220 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC-----HHHHHHHHHH---TSEEEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC-----HHHHHHHHHc---CCCEec-cCCCHHHHHHHHhcCCCceEE
Confidence 3689999999999999999999999999888 65 4455444443 555433 2222 233444443 69999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|++++.. .....++.++..|
T Consensus 221 id~~g~~---~~~~~~~~l~~~G 240 (343)
T 3gaz_A 221 YDTLGGP---VLDASFSAVKRFG 240 (343)
T ss_dssp EESSCTH---HHHHHHHHEEEEE
T ss_pred EECCCcH---HHHHHHHHHhcCC
Confidence 9999842 2334444444433
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00058 Score=59.93 Aligned_cols=74 Identities=19% Similarity=0.216 Sum_probs=49.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEcc-------------CCCHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD-------------VLNHESL 70 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D-------------~~d~~~~ 70 (310)
|.+|.|+| .|++|..++-.|.+.||+|++++.+ +.+.+ .++.....+.+-+ +.=..+.
T Consensus 21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did-----~~kV~---~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~ 91 (444)
T 3vtf_A 21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVN-----PSIVE---RLRAGRPHIYEPGLEEALGRALSSGRLSFAESA 91 (444)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHHHH---HHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHHH---HHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCH
Confidence 67999998 8999999999999999999999988 44442 2322111111111 1001123
Q ss_pred HHHhcCCCEEEEcccc
Q 021596 71 VNAIKQVDVVISTVGH 86 (310)
Q Consensus 71 ~~~~~~~d~Vi~~a~~ 86 (310)
.++++.+|++|.+.+.
T Consensus 92 ~~ai~~ad~~~I~VpT 107 (444)
T 3vtf_A 92 EEAVAATDATFIAVGT 107 (444)
T ss_dssp HHHHHTSSEEEECCCC
T ss_pred HHHHhcCCceEEEecC
Confidence 4556789999998864
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0035 Score=52.84 Aligned_cols=66 Identities=24% Similarity=0.366 Sum_probs=48.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|...|++|++..|+.... ....-. ...+++.++++.+|+|+.+
T Consensus 140 g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~----~~~~~l~ell~~aDvV~l~ 201 (324)
T 3hg7_A 140 GRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRER-------------AGFDQV----YQLPALNKMLAQADVIVSV 201 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC-------------TTCSEE----ECGGGHHHHHHTCSEEEEC
T ss_pred cceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHh-------------hhhhcc----cccCCHHHHHhhCCEEEEe
Confidence 47999999 89999999999999999999999985321 011001 1245677788888988887
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++.+
T Consensus 202 lPlt 205 (324)
T 3hg7_A 202 LPAT 205 (324)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
|
| >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0034 Score=52.83 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=53.8
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh-------c
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI-------K 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~-------~ 75 (310)
.|++|.|+|++|++|...++.|.+.+.+++++.-.. +++....+. .+++.+ +.|.+++.+.+ .
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~----~~~~~~~~~--~~~~~~----~~~~~~ll~~~~~l~~~~~ 71 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPA----TNVGLVDSF--FPEAEF----FTEPEAFEAYLEDLRDRGE 71 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSS----CCCGGGGGT--CTTCEE----ESCHHHHHHHHHHHHHTTC
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCC----HHHHHHHhh--CCCCce----eCCHHHHHHHhhhhcccCC
Confidence 378999999889999999999999888777665332 222111111 123332 23455554322 4
Q ss_pred CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++|+|+.+++... ...++.+|.++|
T Consensus 72 ~vD~V~I~tP~~~---H~~~~~~al~aG 96 (312)
T 3o9z_A 72 GVDYLSIASPNHL---HYPQIRMALRLG 96 (312)
T ss_dssp CCSEEEECSCGGG---HHHHHHHHHHTT
T ss_pred CCcEEEECCCchh---hHHHHHHHHHCC
Confidence 7999999888653 444445555555
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0011 Score=53.76 Aligned_cols=72 Identities=17% Similarity=0.273 Sum_probs=49.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCch--hhH---------hHhhh-cCCcEEEEccCCCHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK--SQL---------LDHFK-NLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~---------~~~l~-~~~~~~v~~D~~d~~~~~ 71 (310)
+|+|.|+| +|.+|+.+++.|.+.|++|++..|+. ++ ... ...+. ..+... ..+..
T Consensus 19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 85 (245)
T 3dtt_A 19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDP-----KATLARAEPDAMGAPPFSQWLPEHPHVH-------LAAFA 85 (245)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHTCC-------CCHHHHGGGSTTCE-------EEEHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCh-----hhhhhhhhhhhhcchhhhHHHhhcCcee-------ccCHH
Confidence 58999998 89999999999999999999999983 22 000 11111 112111 12344
Q ss_pred HHhcCCCEEEEcccchh
Q 021596 72 NAIKQVDVVISTVGHAL 88 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~ 88 (310)
++++++|+||.+.+...
T Consensus 86 e~~~~aDvVilavp~~~ 102 (245)
T 3dtt_A 86 DVAAGAELVVNATEGAS 102 (245)
T ss_dssp HHHHHCSEEEECSCGGG
T ss_pred HHHhcCCEEEEccCcHH
Confidence 56778999999998765
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0011 Score=54.88 Aligned_cols=63 Identities=19% Similarity=0.169 Sum_probs=45.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|...|++|++.+|+..... .++ ..+++.++++.+|+|+.+
T Consensus 122 g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~~~-------~~~~l~ell~~aDiV~l~ 180 (290)
T 3gvx_A 122 GKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-------------VDV-------ISESPADLFRQSDFVLIA 180 (290)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT-------------CSE-------ECSSHHHHHHHCSEEEEC
T ss_pred cchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc-------------ccc-------ccCChHHHhhccCeEEEE
Confidence 47999999 899999999999999999999999854320 011 112445566677777777
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+..
T Consensus 181 ~P~t 184 (290)
T 3gvx_A 181 IPLT 184 (290)
T ss_dssp CCCC
T ss_pred eecc
Confidence 6643
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0014 Score=55.29 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=47.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcC-----CcEEEEccCCCHHHHHHHhcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNL-----GVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~~~~~~~~ 76 (310)
+++|.|+|+ |++|..++..|+..|. +|++++.+.... .. ....+.+. .+++. . .+ .+++++
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~-~g---~~~dl~~~~~~~~~~~i~-~--~~----~~a~~~ 74 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKA-IG---EAMDINHGLPFMGQMSLY-A--GD----YSDVKD 74 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---C-CH---HHHHHTTSCCCTTCEEEC-----C----GGGGTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHH-HH---HHHHHHHhHHhcCCeEEE-E--CC----HHHhCC
Confidence 579999997 9999999999999986 899999984432 11 11222221 22222 2 22 345889
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.+++...
T Consensus 75 aDvVii~~g~p~ 86 (318)
T 1y6j_A 75 CDVIVVTAGANR 86 (318)
T ss_dssp CSEEEECCCC--
T ss_pred CCEEEEcCCCCC
Confidence 999999998643
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0029 Score=53.35 Aligned_cols=66 Identities=17% Similarity=0.294 Sum_probs=46.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|...|++|++..|+..... .+ ...+. .+++.++++.+|+|+.+
T Consensus 137 gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~--------~~----~~~~~-----~~~l~ell~~aDvV~l~ 198 (324)
T 3evt_A 137 GQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPAD--------HF----HETVA-----FTATADALATANFIVNA 198 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCT--------TC----SEEEE-----GGGCHHHHHHCSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhH--------hH----hhccc-----cCCHHHHHhhCCEEEEc
Confidence 47999998 899999999999999999999999854320 00 01111 23445566677777776
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
.+.+
T Consensus 199 lPlt 202 (324)
T 3evt_A 199 LPLT 202 (324)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 6643
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00078 Score=57.80 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=61.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC------------------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV------------------L 65 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~------------------~ 65 (310)
..+|+|+|+ |-+|..+++.+...|.+|++++|+ +.+.+.++ ..|.+++..|. .
T Consensus 184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~---~lGa~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVR-----PEVAEQVR---SVGAQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSS-----GGGHHHHH---HTTCEECCCC-------------CHHHHHH
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HcCCeEEeccccccccccchhhhhHHHHhh
Confidence 368999995 999999999999999999999998 54543333 34666554331 1
Q ss_pred CHHHHHHHhcCCCEEEEcccchh----hhhHHHHHHHHH
Q 021596 66 NHESLVNAIKQVDVVISTVGHAL----LADQVKIIAAIK 100 (310)
Q Consensus 66 d~~~~~~~~~~~d~Vi~~a~~~~----~~~~~~~~~aa~ 100 (310)
+.+.+.++++++|+||.++.... ...+..+++.++
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mk 293 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQ 293 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCC
Confidence 24577888889999998863322 123455565554
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0032 Score=53.07 Aligned_cols=88 Identities=16% Similarity=0.173 Sum_probs=57.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhh-HhHhhhc------CCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQ-LLDHFKN------LGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~-~~~~l~~------~~~~~v~~D~~d~~~~~~~~~ 75 (310)
+++|.|+| +|.+|..++..|+..|. +|++++++. .+.+ ....+.+ ....+...+ |. ++++
T Consensus 5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~-----~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~ 72 (321)
T 3p7m_A 5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQ-----GMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLE 72 (321)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGT
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCCh-----HHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHC
Confidence 57999999 59999999999999887 899999983 3331 1122222 133333211 22 4688
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|+||.+++... ....+.+++++.+..
T Consensus 73 ~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~ 113 (321)
T 3p7m_A 73 NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC 113 (321)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC
Confidence 9999999997643 233455666666654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0016 Score=56.98 Aligned_cols=69 Identities=22% Similarity=0.315 Sum_probs=53.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+++|+|+| +|.+|..+++.+.+.|++|++++ +.... . ..+ ......+.+|+.|.+.+.++.+.+|+|..
T Consensus 24 ~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p-~------~~~-ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 24 SRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSP-A------KQI-SAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCT-T------GGG-CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCc-H------HHh-ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 46999999 58999999999999999999998 53322 1 111 11224577899999999999999998864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00053 Score=59.16 Aligned_cols=75 Identities=19% Similarity=0.335 Sum_probs=52.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC--HHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN--HESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d--~~~~~~~~~~~d~Vi 81 (310)
..+|+|+|| |.+|..+++.+...|.+|++++|+... .++.+.++. .++..+ | .+ .+.+.+.-.++|+||
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~---~ga~~v--~-~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEE---TKTNYY--N-SSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHH---HTCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHH---hCCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence 468999999 999999999999999999999998310 045544443 355555 5 43 223333114799999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
++++..
T Consensus 252 d~~g~~ 257 (366)
T 2cdc_A 252 DATGAD 257 (366)
T ss_dssp ECCCCC
T ss_pred ECCCCh
Confidence 999864
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0029 Score=52.35 Aligned_cols=100 Identities=22% Similarity=0.265 Sum_probs=66.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCC-------------CCCchhhHh-Hhhh--cCCc--EEEEccCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL-------------SAPSKSQLL-DHFK--NLGV--NFVVGDVL 65 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------~~~~~~~~~-~~l~--~~~~--~~v~~D~~ 65 (310)
.+|+|+| .|.+|+.+++.|...|. ++++++++.=. -...|.+.+ +.+. .+.+ +.+..+++
T Consensus 37 ~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 37 FAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT 115 (292)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred CeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence 6899999 69999999999999994 67777766310 001233322 2222 2444 44556677
Q ss_pred CHHHHHHHh-----------cCCCEEEEcccchhhhhHHHHHHHHHHcCCccEE
Q 021596 66 NHESLVNAI-----------KQVDVVISTVGHALLADQVKIIAAIKEAGNVTRF 108 (310)
Q Consensus 66 d~~~~~~~~-----------~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~ 108 (310)
+.+.+...+ +++|+|+++..... .-..+-++|.+.+ ++.+
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~--~R~~in~~c~~~~-~Pli 166 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFE--ARMTINTACNELG-QTWM 166 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHH--HHHHHHHHHHHHT-CCEE
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCcchh--hhhHHHHHHHHhC-CCEE
Confidence 666666654 58999999987653 3345678888887 5554
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0018 Score=56.06 Aligned_cols=88 Identities=18% Similarity=0.257 Sum_probs=61.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC----------------CC-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV----------------LN- 66 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~----------------~d- 66 (310)
..+|+|+|+ |-+|...++.+...|.+|++++|+ +.+.+.++ ..+..++..++ ++
T Consensus 190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~---~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVR-----PAAKEQVA---SLGAKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----TTHHHHHH---HTTCEECCCCC-----------------CH
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHH---HcCCceeecccccccccccccchhhhcchh
Confidence 358999995 999999999999999999999998 44543333 33555544332 11
Q ss_pred -----HHHHHHHhcCCCEEEEcccchh----hhhHHHHHHHHH
Q 021596 67 -----HESLVNAIKQVDVVISTVGHAL----LADQVKIIAAIK 100 (310)
Q Consensus 67 -----~~~~~~~~~~~d~Vi~~a~~~~----~~~~~~~~~aa~ 100 (310)
.+.+.++++++|+||.++.... ...+..+++.++
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk 303 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMK 303 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSC
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCC
Confidence 3578888899999999864332 223456666554
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0021 Score=55.27 Aligned_cols=68 Identities=21% Similarity=0.243 Sum_probs=48.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|.|+| .|.||+.+++.|...|++ |++.+|+.. +.+ .....++..+ +++.++++.+|+|+.
T Consensus 164 g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~-----~~~---~~~~~g~~~~-------~~l~ell~~aDvV~l 227 (364)
T 2j6i_A 164 GKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQAL-----PKD---AEEKVGARRV-------ENIEELVAQADIVTV 227 (364)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCC-----CHH---HHHHTTEEEC-------SSHHHHHHTCSEEEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCcc-----chh---HHHhcCcEec-------CCHHHHHhcCCEEEE
Confidence 47899998 799999999999999998 999998732 221 1122344321 135567778899888
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 228 ~~P~t 232 (364)
T 2j6i_A 228 NAPLH 232 (364)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 88764
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00098 Score=59.58 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=50.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|+ +++|.|+| .|.+|+.++..|.+.|++|++..|+ +++.+.+..... .++.. ..+.+++.+.++++|+
T Consensus 13 ~~-~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~~r~-----~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 13 MS-KQQIGVVG-MAVMGRNLALNIESRGYTVSIFNRS-----REKTEEVIAENPGKKLVP----YYTVKEFVESLETPRR 81 (480)
T ss_dssp ---CBSEEEEC-CSHHHHHHHHHHHTTTCCEEEECSS-----HHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCE
T ss_pred cC-CCeEEEEc-cHHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCE
Confidence 44 57899999 7999999999999999999999998 444432222100 13321 1344443333335999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||.+.+..
T Consensus 82 Vil~Vp~~ 89 (480)
T 2zyd_A 82 ILLMVKAG 89 (480)
T ss_dssp EEECSCSS
T ss_pred EEEECCCH
Confidence 99998864
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0012 Score=56.92 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=54.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
.+|+|+|+ |.+|...++.+...|.+|++++++ +++.+.++.+ ++..+ .|..+.+.+.++..++|+||+++
T Consensus 196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~-----~~~~~~a~~l---Ga~~v-i~~~~~~~~~~~~~g~Dvvid~~ 265 (369)
T 1uuf_A 196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKAL---GADEV-VNSRNADEMAAHLKSFDFILNTV 265 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCcEE-eccccHHHHHHhhcCCCEEEECC
Confidence 58999997 789999999999999999999988 5565555443 43322 35556555555556899999999
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 266 g~~ 268 (369)
T 1uuf_A 266 AAP 268 (369)
T ss_dssp SSC
T ss_pred CCH
Confidence 853
|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0044 Score=52.25 Aligned_cols=93 Identities=17% Similarity=0.123 Sum_probs=54.4
Q ss_pred CCC-CceEEEEccCcchhHH-HHHHHHhC-CCCEE-EEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcC
Q 021596 1 MAS-KSKILSIGGTGYIGKF-IVEASVKA-GHPTF-VLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~-l~~~L~~~-g~~V~-~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
|++ +++|.|+| +|.+|+. +++.|.+. +.+++ +++|+ +++.+.... ..++. -..+.+.+ ..+
T Consensus 1 m~m~~~~vgiiG-~G~~g~~~~~~~l~~~~~~~lvav~d~~-----~~~~~~~~~--~~g~~----~~~~~~~l---~~~ 65 (319)
T 1tlt_A 1 MSLKKLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPT-----RAKALPICE--SWRIP----YADSLSSL---AAS 65 (319)
T ss_dssp ----CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSS-----CTTHHHHHH--HHTCC----BCSSHHHH---HTT
T ss_pred CCCCcceEEEEC-CCHHHHHHHHHHHHhCCCeEEEEEECCC-----HHHHHHHHH--HcCCC----ccCcHHHh---hcC
Confidence 554 47999999 5999996 88888764 56776 55665 223321111 11322 13455544 357
Q ss_pred CCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEc
Q 021596 77 VDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v 109 (310)
+|+|+.+++... ......++++|++.| +..++
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g-~~~~~ 121 (319)
T 1tlt_A 66 CDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK-LTLMV 121 (319)
T ss_dssp CSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT-CCEEE
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CeEEE
Confidence 899998887543 334556777777766 54433
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0008 Score=57.39 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=58.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~~~d~V 80 (310)
..+|+|+|| |.+|..+++.+...|.+|++++|+ +++.+.++. .++..+ .|..+. +.+.++..++|+|
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~---lGa~~~-~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKE---LGADLV-VNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCSEE-ECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---CCCCEE-ecCCCccHHHHHHHHhCCCCEE
Confidence 368999999 779999999999999999999988 555544443 344322 355432 2343433579999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|++++... .....+++++..|
T Consensus 235 id~~g~~~--~~~~~~~~l~~~G 255 (339)
T 1rjw_A 235 VVTAVSKP--AFQSAYNSIRRGG 255 (339)
T ss_dssp EESSCCHH--HHHHHHHHEEEEE
T ss_pred EECCCCHH--HHHHHHHHhhcCC
Confidence 99998532 2334444444433
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0013 Score=55.58 Aligned_cols=74 Identities=23% Similarity=0.149 Sum_probs=50.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHh-Hhhhc------CCcEEEEccCCCHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLL-DHFKN------LGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~-~~l~~------~~~~~v~~D~~d~~~~~~ 72 (310)
|..+|+|.|+|+ |.+|..++..|.+.|+ +|++++++. ++.+.. ..+.. ....+... .| + +
T Consensus 1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~-----~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~ 68 (317)
T 2ewd_A 1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE-----GIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-A 68 (317)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS-----SHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-G
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc-----hHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-H
Confidence 777789999996 9999999999999998 999999983 333221 11111 12222221 12 2 3
Q ss_pred HhcCCCEEEEcccc
Q 021596 73 AIKQVDVVISTVGH 86 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~ 86 (310)
+++++|+||.+++.
T Consensus 69 a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 69 DISGSDVVIITASI 82 (317)
T ss_dssp GGTTCSEEEECCCC
T ss_pred HhCCCCEEEEeCCC
Confidence 57899999999964
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00055 Score=55.59 Aligned_cols=69 Identities=13% Similarity=0.186 Sum_probs=49.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC----CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH----PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~----~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
||+|.|+| .|.+|+.+++.|.+.|+ +|++.+|+ +++.+.+.. ..++.. ..+ ..++++++|+
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~-----~~~~~~~~~--~~g~~~----~~~---~~e~~~~aDv 66 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLN-----TANLKNASE--KYGLTT----TTD---NNEVAKNADI 66 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSC-----HHHHHHHHH--HHCCEE----CSC---HHHHHHHCSE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCC-----HHHHHHHHH--HhCCEE----eCC---hHHHHHhCCE
Confidence 47999999 89999999999999998 99999998 444432211 124432 123 3345667999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||.+..+.
T Consensus 67 Vilav~~~ 74 (247)
T 3gt0_A 67 LILSIKPD 74 (247)
T ss_dssp EEECSCTT
T ss_pred EEEEeCHH
Confidence 99998543
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00043 Score=56.81 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=47.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|+|.|+| .|.+|+.++..|.+.|++|++.+|... +++. +.+...++. .+ ..++++++|+||.+.
T Consensus 1 M~I~iIG-~G~mG~~la~~l~~~g~~V~~~~~~~~---~~~~---~~~~~~g~~------~~---~~~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRS---PSTI---ERARTVGVT------ET---SEEDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCC---HHHH---HHHHHHTCE------EC---CHHHHHTSSEEEECS
T ss_pred CeEEEEe-chHHHHHHHHHHHHCCCeEEEeCCccC---HHHH---HHHHHCCCc------CC---HHHHHhcCCEEEEEC
Confidence 5899998 799999999999999999988655211 2222 233233543 22 234567899999999
Q ss_pred cchh
Q 021596 85 GHAL 88 (310)
Q Consensus 85 ~~~~ 88 (310)
+...
T Consensus 65 ~~~~ 68 (264)
T 1i36_A 65 TPGV 68 (264)
T ss_dssp CGGG
T ss_pred CCHH
Confidence 8753
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0008 Score=49.41 Aligned_cols=85 Identities=11% Similarity=0.115 Sum_probs=55.0
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+++|+|+|+| |..|..+++.|.+.|++|+.+..+ +.. +.+ .|+... .++.++-+.+|++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~-------~~~--~~i--~G~~~~-------~sl~el~~~vDla 74 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR-------FQG--EEL--FGEEAV-------ASLLDLKEPVDIL 74 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG-------GTT--SEE--TTEECB-------SSGGGCCSCCSEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC-------ccc--CcC--CCEEec-------CCHHHCCCCCCEE
Confidence 4689999998 889999999999999985554332 100 000 122211 1222233479999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+.. ....+++.|.+.| ++.++.
T Consensus 75 vi~vp~~---~~~~v~~~~~~~g-i~~i~~ 100 (140)
T 1iuk_A 75 DVFRPPS---ALMDHLPEVLALR-PGLVWL 100 (140)
T ss_dssp EECSCHH---HHTTTHHHHHHHC-CSCEEE
T ss_pred EEEeCHH---HHHHHHHHHHHcC-CCEEEE
Confidence 9988753 4555667777778 877665
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0012 Score=54.70 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=49.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEE-EEccCCCHHHHHHHhc-CCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNF-VVGDVLNHESLVNAIK-QVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~-v~~D~~d~~~~~~~~~-~~d~ 79 (310)
||+|.|+| .|.+|..++..|.+.|+ +|++..|+ +++.+. +...++.. ... + +.++++ ++|+
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~-----~~~~~~---~~~~g~~~~~~~---~---~~~~~~~~aDv 65 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISK---AVDLGIIDEGTT---S---IAKVEDFSPDF 65 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHH---HHHTTSCSEEES---C---GGGGGGTCCSE
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCC-----HHHHHH---HHHCCCcccccC---C---HHHHhcCCCCE
Confidence 57999999 79999999999999998 89998887 434322 22334321 111 2 234677 8999
Q ss_pred EEEcccchh
Q 021596 80 VISTVGHAL 88 (310)
Q Consensus 80 Vi~~a~~~~ 88 (310)
|+.+++...
T Consensus 66 Vilavp~~~ 74 (281)
T 2g5c_A 66 VMLSSPVRT 74 (281)
T ss_dssp EEECSCHHH
T ss_pred EEEcCCHHH
Confidence 999998653
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0023 Score=54.30 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=45.2
Q ss_pred CCC-CceEEEEccCcchhHHHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MAS-KSKILSIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~-~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|++ +++|.|+| +|.+|...++.|.+. +.+|+++ +|+ +++...... ..++.. -..| ++++++
T Consensus 1 M~m~~~~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~~~--~~~~~~---~~~~---~~~ll~~~ 66 (330)
T 3e9m_A 1 MSLDKIRYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRR-----LENAQKMAK--ELAIPV---AYGS---YEELCKDE 66 (330)
T ss_dssp --CCCEEEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSS-----SHHHHHHHH--HTTCCC---CBSS---HHHHHHCT
T ss_pred CCCCeEEEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCC-----HHHHHHHHH--HcCCCc---eeCC---HHHHhcCC
Confidence 653 57999999 599999999999985 5677754 555 333322111 122210 1233 444555
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|+.+++...
T Consensus 67 ~~D~V~i~tp~~~ 79 (330)
T 3e9m_A 67 TIDIIYIPTYNQG 79 (330)
T ss_dssp TCSEEEECCCGGG
T ss_pred CCCEEEEcCCCHH
Confidence 7899999887654
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0022 Score=54.59 Aligned_cols=72 Identities=22% Similarity=0.347 Sum_probs=49.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE--------ccC-CCHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV--------GDV-LNHESLV 71 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~--------~D~-~d~~~~~ 71 (310)
|+ +|+|+|+| .|.+|..++..|.+.|++|+++.|+ + .. +.+...+..+.. ... .|.+.
T Consensus 1 M~-~mkI~IiG-aG~~G~~~a~~L~~~g~~V~~~~r~-----~-~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 67 (335)
T 3ghy_A 1 MS-LTRICIVG-AGAVGGYLGARLALAGEAINVLARG-----A-TL---QALQTAGLRLTEDGATHTLPVRATHDAAA-- 67 (335)
T ss_dssp -C-CCCEEEES-CCHHHHHHHHHHHHTTCCEEEECCH-----H-HH---HHHHHTCEEEEETTEEEEECCEEESCHHH--
T ss_pred CC-CCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEECh-----H-HH---HHHHHCCCEEecCCCeEEEeeeEECCHHH--
Confidence 55 58999998 6999999999999999999999985 1 11 333344544321 111 24332
Q ss_pred HHhcCCCEEEEcccch
Q 021596 72 NAIKQVDVVISTVGHA 87 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~ 87 (310)
+.++|+||.++...
T Consensus 68 --~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 68 --LGEQDVVIVAVKAP 81 (335)
T ss_dssp --HCCCSEEEECCCHH
T ss_pred --cCCCCEEEEeCCch
Confidence 47899999998764
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00091 Score=57.26 Aligned_cols=91 Identities=20% Similarity=0.324 Sum_probs=59.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d 78 (310)
.+|+|+|+ |.+|..+++.+...|. +|++++|+ +++.+.++.+ ++..+ .|..+. +.+.++.. ++|
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~-----~~~~~~~~~~---Ga~~~-~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPS-----DFRRELAKKV---GADYV-INPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSC-----HHHHHHHHHH---TCSEE-ECTTTSCHHHHHHHHTTTSCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh---CCCEE-ECCCCcCHHHHHHHHcCCCCCC
Confidence 58999999 9999999999999998 99999998 5555444443 43322 244332 23444433 699
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+||++++... .....++.++..| +++.
T Consensus 239 ~vid~~g~~~--~~~~~~~~l~~~G---~iv~ 265 (348)
T 2d8a_A 239 VFLEFSGAPK--ALEQGLQAVTPAG---RVSL 265 (348)
T ss_dssp EEEECSCCHH--HHHHHHHHEEEEE---EEEE
T ss_pred EEEECCCCHH--HHHHHHHHHhcCC---EEEE
Confidence 9999998532 2334444444433 4544
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0033 Score=53.42 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=47.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| .|.||+.+++.|...|++|.+..|+... .. . ..+++.+ +++.++++.+|+|+.+
T Consensus 173 gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~---~--~~g~~~~-------~~l~ell~~sDvV~l~ 234 (345)
T 4g2n_A 173 GRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLS-----HA---L--EEGAIYH-------DTLDSLLGASDIFLIA 234 (345)
T ss_dssp TCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCC-----HH---H--HTTCEEC-------SSHHHHHHTCSEEEEC
T ss_pred CCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcc-----hh---h--hcCCeEe-------CCHHHHHhhCCEEEEe
Confidence 47999999 8999999999999999999999998421 10 0 1133221 2456677788888877
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 235 ~Plt 238 (345)
T 4g2n_A 235 APGR 238 (345)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 7654
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00036 Score=57.31 Aligned_cols=80 Identities=16% Similarity=0.286 Sum_probs=54.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|+|.|+| .|.+|+.+++.|.+.|++ |.+++|+ +++.+.+.. ..++... . + +.++++++|+||.
T Consensus 10 ~m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~~~-----~~~~~~~~~--~~g~~~~-~---~---~~~~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIG-AGNLATNLAKALYRKGFRIVQVYSRT-----EESARELAQ--KVEAEYT-T---D---LAEVNPYAKLYIV 74 (266)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS-----HHHHHHHHH--HTTCEEE-S---C---GGGSCSCCSEEEE
T ss_pred CCeEEEEc-CCHHHHHHHHHHHHCCCeEEEEEeCC-----HHHHHHHHH--HcCCcee-C---C---HHHHhcCCCEEEE
Confidence 47899999 599999999999999998 8888887 433322211 1244331 2 2 2335678999999
Q ss_pred cccchhhhhHHHHHHHHHH
Q 021596 83 TVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~ 101 (310)
+++... ...+++.+..
T Consensus 75 av~~~~---~~~v~~~l~~ 90 (266)
T 3d1l_A 75 SLKDSA---FAELLQGIVE 90 (266)
T ss_dssp CCCHHH---HHHHHHHHHT
T ss_pred ecCHHH---HHHHHHHHHh
Confidence 998653 3555555543
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0014 Score=58.61 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=51.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|+ +++|.|+| .|.+|+.++..|.+.|++|.+..|+ +++.+.+... ...++.. ..+.+++.+.++++|+
T Consensus 3 m~-~~~IgvIG-~G~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDv 71 (474)
T 2iz1_A 3 MA-QANFGVVG-MAVMGKNLALNVESRGYTVAIYNRT-----TSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRR 71 (474)
T ss_dssp CT-TBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCE
T ss_pred CC-CCcEEEEe-eHHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCE
Confidence 54 47899999 7999999999999999999999998 4444322221 0013321 2344444333345999
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
|+.+++..
T Consensus 72 Vilavp~~ 79 (474)
T 2iz1_A 72 IMLMVQAG 79 (474)
T ss_dssp EEECCCTT
T ss_pred EEEEccCc
Confidence 99998864
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0018 Score=55.38 Aligned_cols=90 Identities=16% Similarity=0.195 Sum_probs=58.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCCHHHHHHHh-cCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLNHESLVNAI-KQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~~~~~~-~~~d~Vi 81 (310)
..+|+|+||+|.+|...++.+...|.+|++++++ +++.+.++.+ ++. ++..+-...+.+.++- .++|+||
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASR-----NETIEWTKKM---GADIVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCS-----HHHHHHHHHH---TCSEEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCcEEEECCccHHHHHHHhCCCCccEEE
Confidence 3689999999999999999999999999999987 5566555544 433 2222211123344431 1699999
Q ss_pred EcccchhhhhHHHHHHHHHHcC
Q 021596 82 STVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++++... .....+++++..|
T Consensus 223 d~~g~~~--~~~~~~~~l~~~G 242 (346)
T 3fbg_A 223 CTFNTDM--YYDDMIQLVKPRG 242 (346)
T ss_dssp ESSCHHH--HHHHHHHHEEEEE
T ss_pred ECCCchH--HHHHHHHHhccCC
Confidence 9988532 1234444444444
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00078 Score=58.93 Aligned_cols=81 Identities=22% Similarity=0.343 Sum_probs=55.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+|+ |.+|+.+++.|...|. +|+++.|+ +.+. ...+.+ +... .++ +++.+++.++|+||
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~-----~~ra~~la~~~---g~~~--~~~---~~l~~~l~~aDvVi 232 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARDL---GGEA--VRF---DELVDHLARSDVVV 232 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHHH---TCEE--CCG---GGHHHHHHTCSEEE
T ss_pred CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc---CCce--ecH---HhHHHHhcCCCEEE
Confidence 478999996 9999999999999998 89999998 4443 222222 4432 222 34666778999999
Q ss_pred EcccchhhhhHHHHHHH
Q 021596 82 STVGHALLADQVKIIAA 98 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~a 98 (310)
.+++..........++.
T Consensus 233 ~at~~~~~~~~~~~l~~ 249 (404)
T 1gpj_A 233 SATAAPHPVIHVDDVRE 249 (404)
T ss_dssp ECCSSSSCCBCHHHHHH
T ss_pred EccCCCCceecHHHHHH
Confidence 99876542222334444
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00085 Score=56.55 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=54.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCCHHHHHH-HhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLNHESLVN-AIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~~~~-~~~~~d~ 79 (310)
+|+|.|+| .|.+|..+++.|.+.|+ +|++.+|+ +++.+ .....++. ....|+ .+ +++++|+
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~-----~~~~~---~a~~~G~~~~~~~~~------~~~~~~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESIS---KAVDLGIIDEGTTSI------AKVEDFSPDF 97 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHH---HHHHTTSCSEEESCT------TGGGGGCCSE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECC-----HHHHH---HHHHCCCcchhcCCH------HHHhhccCCE
Confidence 37999999 89999999999999998 89999998 43332 22233431 112222 34 5679999
Q ss_pred EEEcccchhhhhHHHHHHHHHH
Q 021596 80 VISTVGHALLADQVKIIAAIKE 101 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~ 101 (310)
||.+++... ...+++.+..
T Consensus 98 Vilavp~~~---~~~vl~~l~~ 116 (314)
T 3ggo_A 98 VMLSSPVRT---FREIAKKLSY 116 (314)
T ss_dssp EEECSCGGG---HHHHHHHHHH
T ss_pred EEEeCCHHH---HHHHHHHHhh
Confidence 999998653 3344444433
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0018 Score=58.12 Aligned_cols=73 Identities=15% Similarity=0.139 Sum_probs=50.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-hhc-CCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKN-LGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.+|.|+| .|.+|+.++..|.++|++|++..|+ +++.+.+.. ... .++.. ..+.+++.+.++++|+||.
T Consensus 11 ~~IgvIG-lG~MG~~lA~~La~~G~~V~v~dr~-----~~~~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 11 ADFGLIG-LAVMGQNLILNAADHGFTVCAYNRT-----QSKVDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----SHHHHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEEE
T ss_pred CCEEEEe-eHHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEEE
Confidence 7899999 7999999999999999999999998 545432222 100 23221 2344444333445999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+.+..
T Consensus 81 ~Vp~~ 85 (497)
T 2p4q_A 81 LVKAG 85 (497)
T ss_dssp CCCSS
T ss_pred EcCCh
Confidence 98864
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0023 Score=54.42 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=59.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEc-cCCC---------HHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG-DVLN---------HESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~-D~~d---------~~~~~~ 72 (310)
|.+|.|.|+ |.+|+.+++.|.++. .+|.++.-.. +.... ......++..... |..+ .+++++
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~----~~~~~--~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~ 73 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTS----PNYEA--FIAHRRGIRIYVPQQSIKKFEESGIPVAGTVED 73 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSS----CSHHH--HHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHH
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCC----hHHHH--HHHHhcCcceecCcCHHHHhcccccccccCHhH
Confidence 469999999 999999999998765 4666554321 22211 1122223333222 1110 001224
Q ss_pred HhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 73 AIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+++++|+|+.+++.. .+......+.+.| ++.+..|.
T Consensus 74 l~~~vDvV~~aTp~~---~s~~~a~~~~~aG-~kvV~~sa 109 (340)
T 1b7g_O 74 LIKTSDIVVDTTPNG---VGAQYKPIYLQLQ-RNAIFQGG 109 (340)
T ss_dssp HHHHCSEEEECCSTT---HHHHHHHHHHHTT-CEEEECTT
T ss_pred hhcCCCEEEECCCCc---hhHHHHHHHHHcC-CeEEEeCC
Confidence 456899999998864 3556667777888 77776654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 310 | ||||
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 4e-65 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-63 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 1e-23 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 2e-14 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 2e-08 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 5e-08 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-08 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 8e-08 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-07 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-07 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-07 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-07 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-06 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-06 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 3e-06 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 3e-06 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 6e-06 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 7e-06 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 8e-06 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 9e-06 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 1e-05 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-05 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 5e-05 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 0.001 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.002 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 0.003 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 0.003 |
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 205 bits (520), Expect = 4e-65
Identities = 191/309 (61%), Positives = 231/309 (74%), Gaps = 4/309 (1%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST-LSAPSKSQLLDHFKNLGVNFVV 61
S+S+IL IG TGYIG+ + +AS+ GHPTF+LVREST S K+QLL+ FK G N V
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61
Query: 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAH 121
G + +H SLV A+K VDVVISTVG + QV II AIKE G V RFFPSEFGNDVD H
Sbjct: 62 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 121
Query: 122 GAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVIL 181
++VKA++RRA+EAEGIPYTYV S CF GYFL +L Q G APPRDKVVIL
Sbjct: 122 --AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVIL 179
Query: 182 GDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241
GDGN + V+ KE+DI T+TIKAVDDPRTLNK LY++ P N S N+LV+LWE+KI KTLE
Sbjct: 180 GDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239
Query: 242 REYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTT 301
+ YV EE++LK I + P N+ ++I HS+F+ G QTNFEI P+ GVEASQL+PDVKYTT
Sbjct: 240 KAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPDVKYTT 298
Query: 302 VDEYLNQFV 310
VDEYL+ FV
Sbjct: 299 VDEYLSNFV 307
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 200 bits (509), Expect = 2e-63
Identities = 142/312 (45%), Positives = 206/312 (66%), Gaps = 7/312 (2%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
KS++L +GGTGYIGK IV AS+ GHPT+VL R +S K Q+L +FK LG +
Sbjct: 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 62
Query: 64 VLNHESLVNAIKQVDVVISTVGHALL----ADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+ +H+ LV+A+KQVDVVIS + +L +Q+K++ AIKEAGN+ RF PSEFG D D
Sbjct: 63 LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI 122
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQ-PGAAAPPRDKV 178
S+ + K ++RRA+EA IPYTYV S F GYF +L Q G PPRDKV
Sbjct: 123 -MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKV 181
Query: 179 VILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238
+I GDGN K ++ EDD+ TYTIK++DDP+TLNK +YI+PP NI S +++ +WER +
Sbjct: 182 LIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 241
Query: 239 TLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVK 298
L++ Y+S + L ++++ + + ++ + +F G NFEI P+ +EA++L+P+VK
Sbjct: 242 NLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYPEVK 300
Query: 299 YTTVDEYLNQFV 310
Y T+D YL ++V
Sbjct: 301 YVTMDSYLERYV 312
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 97.0 bits (240), Expect = 1e-23
Identities = 40/266 (15%), Positives = 79/266 (29%), Gaps = 17/266 (6%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
K I +G TG G ++ + GH V + V G
Sbjct: 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS-----LKGLIAEELQAIPNVTLFQGP 57
Query: 64 VLNHESLVNAIKQVD----VVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDR 119
+LN+ L++ + + + ++ +A + A K AG + + S +
Sbjct: 58 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117
Query: 120 AHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV 179
P + K + V G+P T+V + ++ F D
Sbjct: 118 GPWPAVP----MWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTF 173
Query: 180 IL----GDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERK 235
P + E D+ ++ D I S + + + R
Sbjct: 174 EWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRA 233
Query: 236 IGKTLEREYVSEEQLLKNIQEAAPPQ 261
+ + + V + ++ NI Q
Sbjct: 234 LNRRVTYVQVPKVEIKVNIPVGYREQ 259
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.5 bits (166), Expect = 2e-14
Identities = 46/224 (20%), Positives = 72/224 (32%), Gaps = 31/224 (13%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
MA K KI G TG G + +V+AG+ VLVR S L + V
Sbjct: 1 MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR--------DSSRLPSEGPRPAHVV 51
Query: 61 VGDVLNHESLVNAIKQVDVVISTVG--------HALLADQVKIIAAIKEAGNVTRFFPSE 112
VGDVL + + D VI +G + I+AA+K G +
Sbjct: 52 VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111
Query: 113 FGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAA 172
D V P D R+ + + G+ Y V +
Sbjct: 112 AFLLWDPTK--VPPRLQAVTDDHIRMHKVLRESGLKYVAV----MPPHIGDQ-------- 157
Query: 173 PPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216
P + DG + + D+ + ++ + + Y
Sbjct: 158 PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 52.1 bits (123), Expect = 2e-08
Identities = 31/258 (12%), Positives = 71/258 (27%), Gaps = 28/258 (10%)
Query: 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV 61
A+ +L G +G G+ + + + + + + + + +
Sbjct: 1 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKG---LVRSAQGKEKIGG----EADVFI 53
Query: 62 GDVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAH 121
GD+ + +S+ A + +D ++ + D
Sbjct: 54 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 113
Query: 122 GAVEPAK-------------SVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQP 168
++ AK + + E Y D +++
Sbjct: 114 NQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173
Query: 169 GAAAPPRDKVVILGDGNPKAVYNKE------DDIATYTIKAVDDPRTLNK--NLYIQPPG 220
G V L G + + D+A I+A+ NK +L +P G
Sbjct: 174 GGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEG 233
Query: 221 NIYSFNDLVSLWERKIGK 238
D +L+ + +
Sbjct: 234 TSTPTKDFKALFSQVTSR 251
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 51.4 bits (122), Expect = 4e-08
Identities = 44/275 (16%), Positives = 84/275 (30%), Gaps = 43/275 (15%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTF----VLVRESTLSAPSKSQLLDHFKNLGVNFVV 61
++L GG G+IG V + +P V+V +S A +++ L + + FV
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 62 GDVLNHESLVNAIKQVDVVISTVGHALLAD---------------QVKIIAAIKEAGNVT 106
GD+ + L ++ VD ++ + + ++ +AG
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121
Query: 107 RFFPSE---FGNDVDRAHGAVEPAK--SVYYDVKAR----IRRAVEAEGIPYTYVESYCF 157
S +G+ + P + S Y KA R G+ C
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT--RCC 179
Query: 158 DGY--------FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRT 209
+ Y +P + + + GDG + DD + R
Sbjct: 180 NNYGPYQHPEKLIPLFVT---NLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR- 235
Query: 210 LNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244
+Y G + +L + +G
Sbjct: 236 -AGEIYHIGGGLELTNRELTGILLDSLGADWSSVR 269
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 51.3 bits (122), Expect = 5e-08
Identities = 46/281 (16%), Positives = 89/281 (31%), Gaps = 43/281 (15%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL---DHFKNLGVNF 59
SK L G TG G ++ E ++ G+ + R ++ + + H N +
Sbjct: 1 SK-VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 59
Query: 60 VVGDVLNHESLVNAIK--QVDVVISTVGHALLADQVK---------------IIAAIKEA 102
GD+ + +L ++ Q D V + + +A + ++ AI+
Sbjct: 60 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119
Query: 103 G--NVTRFF----PSEFGNDVDRAHGAVEP--AKSVYYDVKARIRRAV----EAEGIP-- 148
G TRF+ +G + P +S Y K E+ G+
Sbjct: 120 GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC 179
Query: 149 ---YTYVESYCFDGYFLPNLLQPGA--AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203
ES F+ + A + + LG+ + + D
Sbjct: 180 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM 239
Query: 204 VDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREY 244
+ + + + G YS V + ++G L E
Sbjct: 240 LQQEQPEDFVI---ATGVQYSVRQFVEMAAAQLGIKLRFEG 277
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 50.7 bits (120), Expect = 7e-08
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
++L GG+GYIG ++ GH +L S S +++ FV GD+
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN-SKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 66 NHESLVNAIK--QVDVVI 81
N + + +D VI
Sbjct: 61 NEALMTEILHDHAIDTVI 78
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 50.5 bits (119), Expect = 8e-08
Identities = 40/296 (13%), Positives = 75/296 (25%), Gaps = 58/296 (19%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
K+L GG G++G + ++ G V S A L N FV GD+
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN--FEFVHGDIR 59
Query: 66 NHESLVNAIK--QVDVVISTVGHALLADQVK---------------IIAAIKEAGNVTRF 108
N + I D G + + ++ A+++ +
Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 119
Query: 109 F------------------PSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVE------- 143
VD+ +G E + ++ + A +
Sbjct: 120 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYA 179
Query: 144 -AEGIPYTYVESYCFDGYFLPNLLQPG-----------AAAPPRDKVVILGDGNPKAVYN 191
G+ G G I G+G
Sbjct: 180 RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 239
Query: 192 KEDDIATYTIKAVDDPRTLNKNLYIQ--PPGNIYSFNDLVSLWERKIGKTLEREYV 245
+D+ + A+ + + N + N S +L L E + +
Sbjct: 240 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL 295
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
KIL GG G+IG +V +K T V + + T A + L D ++ NF D+
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT-YAGNLESLSDISESNRYNFEHADIC 60
Query: 66 NHESLVNAIK--QVDVVI 81
+ + + Q D V+
Sbjct: 61 DSAEITRIFEQYQPDAVM 78
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 49.8 bits (117), Expect = 2e-07
Identities = 13/66 (19%), Positives = 27/66 (40%)
Query: 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV 64
S +L G G++ +VE ++ G+ R ++ A + + + VV D+
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 65 LNHESL 70
L +
Sbjct: 72 LKQGAY 77
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 49.6 bits (117), Expect = 2e-07
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
I+ GG G+IG V V V + L+ L+ V VVGD+
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK-LTYAGNKANLEAILGDRVELVVGDIA 62
Query: 66 NHESL 70
+ E +
Sbjct: 63 DAELV 67
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 2e-07
Identities = 38/281 (13%), Positives = 91/281 (32%), Gaps = 52/281 (18%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
+ +IL GG G++G + + + GH V+ T + + ++H+ + +
Sbjct: 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHW----IGHENFE 52
Query: 64 VLNHESLVNAIKQVDVVI-----STVGHAL----------LADQVKIIAAIKEAGNVTRF 108
++NH+ + +VD + ++ + + + ++ K G
Sbjct: 53 LINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLL 111
Query: 109 FPS--------EFGNDVDRAHGAVEPAK--SVYYDVKARIRRAVEA----EGIPYTYV-- 152
S E + G V P + Y + K A EG+
Sbjct: 112 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARI 171
Query: 153 ------ESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206
+ DG + N + + + + G G+ + D+ + ++
Sbjct: 172 FNTFGPRMHMNDGRVVSNFILQALQ---GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 228
Query: 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247
+ ++ + L + +G E +++SE
Sbjct: 229 N---VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE 266
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 47.3 bits (110), Expect = 1e-06
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
++L +G G+IG + E ++ H + + + + +FV GD+
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS------DAISRFLNHPHFHFVEGDIS 55
Query: 66 NHESLVNAIKQ 76
H + +
Sbjct: 56 IHSEWIEYHVK 66
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.6 bits (109), Expect = 2e-06
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 5 SK-ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD 63
SK +L GG GYIG V ++ G+ V S + S ++ L+ + F D
Sbjct: 1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVLTKHHIPFYEVD 59
Query: 64 VLNHESLVNAIKQVDV 79
+ + + L K+ +
Sbjct: 60 LCDRKGLEKVFKEYKI 75
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.7 bits (106), Expect = 3e-06
Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 15/86 (17%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVREST---------------LSAPSKSQLLD 50
+++ IGG GY G K + ++ S +
Sbjct: 3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62
Query: 51 HFKNLGVNFVVGDVLNHESLVNAIKQ 76
+ VGD+ + E L + K
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKS 88
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.7 bits (107), Expect = 3e-06
Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 8/80 (10%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
+ KI G G+I I GH + F
Sbjct: 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--------DMFCDEFH 63
Query: 61 VGDVLNHESLVNAIKQVDVV 80
+ D+ E+ + + VD V
Sbjct: 64 LVDLRVMENCLKVTEGVDHV 83
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.6 bits (104), Expect = 6e-06
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
L G TG G ++ + ++ G+ LV S+ ++ +L + + + GD+
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARR--SSDTRWRLRELGIEGDIQYEDGDMA 59
Query: 66 NHESLVN 72
+ S+
Sbjct: 60 DACSVQR 66
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 44.8 bits (104), Expect = 7e-06
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
++ G TG+ G ++ G + S G+ +GD+
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL---TAPTVPSLFETARVADGMQSEIGDIR 66
Query: 66 NHESLVNAIKQ 76
+ L+ +I++
Sbjct: 67 DQNKLLESIRE 77
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 44.5 bits (104), Expect = 8e-06
Identities = 41/277 (14%), Positives = 80/277 (28%), Gaps = 39/277 (14%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV-- 60
+K ++ G G +G I + G VL L+ + D F + ++ V
Sbjct: 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYL 60
Query: 61 ----VGDVLNHESLVNAIKQVDVVIST--VGHALLADQVKIIAA--IKEAGNVTRFFPSE 112
VG ++ + + +++I + + A D K++ + + +E
Sbjct: 61 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAE 120
Query: 113 FGNDVDRAHGAVEPAKSVY-----------------YDVKARIRRAVEAEGIPYTYVESY 155
+ G +EP Y Y R G P+
Sbjct: 121 ----SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG-PHDNFHPS 175
Query: 156 CFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLY 215
A A VV+ G G P + DD+A +I ++ +
Sbjct: 176 NSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENT 235
Query: 216 IQP-------PGNIYSFNDLVSLWERKIGKTLEREYV 245
G + +L + +G +
Sbjct: 236 QPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD 272
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.3 bits (103), Expect = 9e-06
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK----SQLLDHFKNLGVNF 59
+ L G TG G ++ E + G+ L+R S+ + + +
Sbjct: 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60
Query: 60 VVGDVLNHESLVNAIKQ 76
D+ + SL I
Sbjct: 61 HYADLTDASSLRRWIDV 77
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 43.8 bits (101), Expect = 1e-05
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 22/78 (28%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL 65
IL G TG +G + + G+ + V GD
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHS--------------------KEFCGDFS 41
Query: 66 NHESLVNAIKQV--DVVI 81
N + + ++++ DV++
Sbjct: 42 NPKGVAETVRKLRPDVIV 59
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.9 bits (102), Expect = 1e-05
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST-----LSAPSKSQLLDHFKNLGVN 58
K+L GG GYIG V ++AG+ V+ S P + + V
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61
Query: 59 FVVGDVLNH 67
F D+L+
Sbjct: 62 FEEMDILDQ 70
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.3 bits (95), Expect = 5e-05
Identities = 24/229 (10%), Positives = 57/229 (24%), Gaps = 21/229 (9%)
Query: 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVG 62
+ ++L G TG G+ +++ + V+ ++ L +H + +
Sbjct: 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP-------ARKALAEHPRLDNPVGPLA 53
Query: 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHG 122
++L + + + + A V A G
Sbjct: 54 ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG 113
Query: 123 AVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG 182
A + Y VK + +A + + A + +
Sbjct: 114 ADAKSSIFYNRVKGELE---QALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARIL 170
Query: 183 DGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSL 231
G + D+A + + ++L L
Sbjct: 171 PGKYHGIE--ACDLARALWRLALEEG---------KGVRFVESDELRKL 208
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.3 bits (93), Expect = 2e-04
Identities = 42/274 (15%), Positives = 74/274 (27%), Gaps = 35/274 (12%)
Query: 1 MASKSK-ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPS---KSQLLDHFKNLG 56
+ ++ K L G G+IG ++E +K L +T + L+ +
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71
Query: 57 VNFVVGDVLNHESLVNAIKQVDV------------------------VISTVGHALLADQ 92
F+ GD+ N + NA VD + + + A
Sbjct: 72 FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 93 VKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYT-- 150
K+ + A + T D + P Y + G
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191
Query: 151 ---YVESYCFDGYFLPNLLQPG--AAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205
V D + P ++ D V I GDG + ++ + A
Sbjct: 192 RYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAAT 251
Query: 206 DPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239
+Y G S N L + +
Sbjct: 252 AGLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN 285
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (87), Expect = 0.001
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 6 KI-LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSK----SQLLDHFKNLGVNFV 60
+ L G TG G ++ E ++ G+ +VR S+ + + +
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 61 VGDVLNHESLVNAIKQVD 78
GD+ + LV I +V
Sbjct: 62 YGDLTDSTCLVKIINEVK 79
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (83), Expect = 0.002
Identities = 7/35 (20%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLV 35
M +K + +G +G G+ +++ ++ G + V +
Sbjct: 12 MQNK-SVFILGASGETGRVLLKEILEQGLFSKVTL 45
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 36.3 bits (82), Expect = 0.003
Identities = 11/55 (20%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFV 60
KIL G G +G+ I + + L + + F N V
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-LDITNVLAVNKFFNEKKPNVV 56
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.1 bits (83), Expect = 0.003
Identities = 14/67 (20%), Positives = 27/67 (40%)
Query: 11 GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESL 70
G IG+ EA + G ++ K+ L + F+ F+ DV + + L
Sbjct: 10 GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 69
Query: 71 VNAIKQV 77
+ ++V
Sbjct: 70 RDTFRKV 76
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 310 | |||
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 100.0 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 100.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.97 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.95 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.94 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.93 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.9 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.87 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.87 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.75 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.72 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.72 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.7 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.7 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.7 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.7 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.69 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.69 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.68 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.68 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.68 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.68 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.67 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.67 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.67 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.66 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.66 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.66 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.66 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.66 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.65 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.64 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.64 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.63 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.63 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.63 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.63 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.63 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.62 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.62 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.61 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.61 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.6 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.6 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.6 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.59 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.59 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.59 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.59 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.58 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.58 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.57 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.57 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.56 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.54 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.53 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.53 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.51 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.51 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.51 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.45 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.42 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.41 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.41 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.37 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.37 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.34 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.33 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.31 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.29 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.25 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.18 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.16 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.96 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.91 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.69 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.62 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.53 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.47 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.27 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.21 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.15 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.08 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 98.06 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.04 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 98.01 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.01 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.01 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.0 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.99 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.99 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.95 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.95 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.94 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.94 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.94 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.84 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.82 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.82 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.82 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.81 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.79 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.78 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.75 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.74 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.73 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.73 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.71 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.67 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.65 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.64 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.63 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.62 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.61 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.61 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.61 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.61 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.6 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.6 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.56 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.55 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.55 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.54 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.52 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.52 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.5 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.49 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.46 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.43 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 97.42 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.41 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.39 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.37 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.37 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.36 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.36 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.35 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.34 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.32 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.31 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.31 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.3 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.29 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.29 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.25 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 97.24 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.22 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.21 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.18 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.17 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 97.15 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.11 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.09 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 97.04 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 97.01 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 97.0 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.98 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.94 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.9 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.9 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.9 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.9 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.9 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.83 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.82 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.78 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.75 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.69 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.62 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.59 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.59 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.55 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.54 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.54 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 96.52 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.51 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.49 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.41 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.37 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.35 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.32 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.31 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.3 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.3 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.28 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.27 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.26 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.07 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.06 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.99 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.93 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.93 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 95.92 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.91 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.85 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.76 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.67 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 95.65 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.62 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.62 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.62 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.59 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 95.49 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.47 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 95.45 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.44 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 95.38 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.27 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.27 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.22 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.19 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.17 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.15 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.04 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.01 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.0 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.93 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 94.89 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.79 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.76 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 94.72 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 94.71 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.67 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 94.66 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.61 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.56 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 94.47 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 94.41 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.35 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.32 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 94.28 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.27 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.11 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 94.04 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.99 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.93 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.89 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.89 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.79 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 93.78 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.72 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 93.6 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.59 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 93.53 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 93.51 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 93.41 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 93.39 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.33 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.28 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 93.09 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.03 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 92.9 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 92.86 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.85 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 92.55 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 92.51 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 92.5 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 92.38 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.27 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.23 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 92.04 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.83 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 91.72 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.62 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.53 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 91.5 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.36 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.28 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 90.8 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 90.58 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 90.51 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.41 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 90.38 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 90.38 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 90.25 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 90.22 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 90.05 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.93 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 89.84 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.71 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 89.67 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 89.44 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.39 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 89.35 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 88.82 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 88.46 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 88.29 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.09 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.02 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.64 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 87.02 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 86.96 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 86.73 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.56 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.43 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.37 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.3 | |
| d1wa3a1 | 202 | KDPG aldolase {Thermotoga maritima [TaxId: 2336]} | 86.29 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 86.25 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 86.19 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 86.16 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.05 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 85.96 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 85.35 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 85.34 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.25 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 84.04 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 83.29 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 83.14 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 82.95 | |
| d1wbha1 | 213 | KDPG aldolase {Escherichia coli [TaxId: 562]} | 82.76 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.39 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 82.38 | |
| d1vmea1 | 148 | ROO-like flavoprotein TM0755, C-terminal domain {T | 82.34 | |
| d1t0ia_ | 185 | Hypothetical protein Ylr011wp {Baker's yeast (Sacc | 82.25 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.75 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 81.73 | |
| d1mxsa_ | 216 | KDPG aldolase {Pseudomonas putida [TaxId: 303]} | 81.49 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 81.34 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 80.85 | |
| d1jzta_ | 243 | Hypothetical protein YNL200c (YNU0_YEAST) {Baker's | 80.53 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=100.00 E-value=6e-42 Score=291.06 Aligned_cols=306 Identities=46% Similarity=0.819 Sum_probs=249.0
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+++||||||||||||+++++.|+++||+|++++|+.......+......+...+++++++|+.|.+++.+++++++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 36789999999999999999999999999999998766545555666667778999999999999999999999999999
Q ss_pred cccchh----hhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceec
Q 021596 83 TVGHAL----LADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFD 158 (310)
Q Consensus 83 ~a~~~~----~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~ 158 (310)
+++... ...+.+++++|++.+..+++++|+++........+..+ ...|...|..++++.+..+++++++||+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~ 160 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQP-GSITFIDKRKVRRAIEAASIPYTYVSSNMFA 160 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSS-TTHHHHHHHHHHHHHHHTTCCBCEEECCEEH
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccch-hhhhhHHHHHHHHhhcccccceEEeccceee
Confidence 987654 66788899999988756777889888765544313333 5566699999999999999999999999999
Q ss_pred cccccccCCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 159 GYFLPNLLQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
++..+.+..... .....+...++++++..++|++++|+|++++.++.+++..++.+++.++++.+|+.|+++.+++.+|
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
T d1qyda_ 161 GYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240 (312)
T ss_dssp HHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred cCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence 876544433222 1235667788899999999999999999999999998888888888777778999999999999999
Q ss_pred CCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 238 KTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
++.++..+|.+++...+...++|........+..+..|...++..... ..+..+++|++++||++|||+++|
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ea~~l~Pd~~~tt~~e~l~~~v 312 (312)
T d1qyda_ 241 QNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYPEVKYVTMDSYLERYV 312 (312)
T ss_dssp CCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSS-EEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred CCCeEEECCHHHHHHHHHhcCCcHhHHHHHHHHHHhcCcccccccCcc-hhhHHHhCCCCCcCcHHHHHHhhC
Confidence 999999999998888887778887766555555555555444444332 245567899999999999999986
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=100.00 E-value=2.3e-41 Score=286.36 Aligned_cols=304 Identities=63% Similarity=1.000 Sum_probs=249.6
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC-CchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA-PSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
++|||||||||||||+++++.|+++||+|++++|+..... +.+......+...+++++.+|+.+.+.+.+.+++++.|+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 4789999999999999999999999999999999865531 233444555667789999999999999999999999999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceeccc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFDGY 160 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~~~ 160 (310)
|+++......+.+++++++..+ ++++++ |+++....... ...+ ...+...+...+.++++.+++++++||+.++++
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~ 158 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVH-AVEP-AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY 158 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCC-CCTT-HHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHH
T ss_pred ecccccccchhhHHHHHHHHhc-cccceeeecccccccccc-cccc-ccccccccccccchhhccCCCceecccceecCC
Confidence 9999888888899999999998 655554 77776654433 2222 445558888899999999999999999999987
Q ss_pred cccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 161 FLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
..+.+.........+.....++.++..++|++++|+|++++++++++...++.+++.++++.+|+.|+++.+++++|++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 159 FLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp HTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred CccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCC
Confidence 66555554444466777888899999999999999999999999998878888888777789999999999999999999
Q ss_pred eeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCCcccCHHHHHHhhC
Q 021596 241 EREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDVKYTTVDEYLNQFV 310 (310)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~e~l~~~~ 310 (310)
++..+|.+++.+.+...+.|........+.++..+...++..... ..+..+++|++++||+||+|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~P~~~~~t~ee~l~~~v 307 (307)
T d1qyca_ 239 EKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPDVKYTTVDEYLSNFV 307 (307)
T ss_dssp EEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred cEEECCHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccCcc-hhhHHHhCCCCCcCcHHHHHHHhC
Confidence 999999999999988888887776666666665555544444332 345678899999999999999986
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-32 Score=219.16 Aligned_cols=193 Identities=23% Similarity=0.271 Sum_probs=157.1
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+ |+||+||||||++|+++++.|+++||+|++++|++++. ......+++++.+|+.|.+++.++++++|+|
T Consensus 1 m~-~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~--------~~~~~~~~~~~~gD~~d~~~l~~al~~~d~v 71 (205)
T d1hdoa_ 1 MA-VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL--------PSEGPRPAHVVVGDVLQAADVDKTVAGQDAV 71 (205)
T ss_dssp CC-CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS--------CSSSCCCSEEEESCTTSHHHHHHHHTTCSEE
T ss_pred CC-CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc--------ccccccccccccccccchhhHHHHhcCCCEE
Confidence 55 78999999999999999999999999999999994432 2233578999999999999999999999999
Q ss_pred EEcccchh--------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEE
Q 021596 81 ISTVGHAL--------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTY 151 (310)
Q Consensus 81 i~~a~~~~--------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i 151 (310)
||+++... ..++.++++++++++ ++|||+ |+.+...+... ..+....|...|..+|+++++.+++|++
T Consensus 72 i~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~--~~~~~~~~~~~~~~~e~~l~~~~~~~ti 148 (205)
T d1hdoa_ 72 IVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK--VPPRLQAVTDDHIRMHKVLRESGLKYVA 148 (205)
T ss_dssp EECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC--SCGGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcc--ccccccccchHHHHHHHHHHhcCCceEE
Confidence 99998654 667889999999999 999998 55544322211 2223446668999999999999999999
Q ss_pred EecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEc
Q 021596 152 VESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 152 ~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~ 217 (310)
+||+.++++.. .+...+..++..+..+|+++|+|++++.+++++++.|+.+++.
T Consensus 149 irp~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 149 VMPPHIGDQPL------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp ECCSEEECCCC------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred EecceecCCCC------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 99999876421 2233455566777889999999999999999998888888875
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.1e-32 Score=236.93 Aligned_cols=234 Identities=16% Similarity=0.132 Sum_probs=179.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|+..|||||||||||||++|+++|+++||+|++++|...... .......++..+|+.+.+.+.++++++|+|
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~V 83 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHV 83 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--------hhhcccCcEEEeechhHHHHHHHhhcCCeE
Confidence 777799999999999999999999999999999988754431 112346788999999999999999999999
Q ss_pred EEcccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc----------cCCCCCCcchh
Q 021596 81 ISTVGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR----------AHGAVEPAKSV 130 (310)
Q Consensus 81 i~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~----------~~~~~~~~~~~ 130 (310)
+|+++... +.++.+++++|++.+ +++||+ |+ |+..... +..+.. +.+.
T Consensus 84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~-p~~~ 161 (363)
T d2c5aa1 84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAE-PQDA 161 (363)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBC-CSSH
T ss_pred eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCC-CCCH
Confidence 99996543 677899999999999 999997 43 3322110 111222 3678
Q ss_pred hHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCCC--------CCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 131 YYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA--------AAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 131 y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
||.+|..+|++++. .+++++++||+.++|..-........ ..........+++|.+.++|+|++|+++
T Consensus 162 Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~ 241 (363)
T d2c5aa1 162 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 241 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHH
Confidence 99999999998864 58999999977776642211100000 0023445678888999999999999999
Q ss_pred HHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 199 YTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 199 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
++..+++.+ .++.||++++ +.+|..|+++.+.+.+|++.++...+.
T Consensus 242 ~~~~~~~~~--~~~~~ni~~~-~~~s~~~l~~~i~~~~g~~~~i~~~~~ 287 (363)
T d2c5aa1 242 GVLRLTKSD--FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPG 287 (363)
T ss_dssp HHHHHHHSS--CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECC
T ss_pred HHHHHHhCC--CCCeEEEecC-CcccHHHHHHHHHHHhCCCCceEeCCC
Confidence 999998765 4678888754 589999999999999999887776654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-31 Score=228.69 Aligned_cols=239 Identities=20% Similarity=0.318 Sum_probs=177.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|||||||||||||++|++.|+++|++|++++|..... .......+.+...+++++++|+.|.+.+.++++ ++|+|||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH 79 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 6899999999999999999999999999998865443 333344455566789999999999999999998 8999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----ccCCCCCCcchhhHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+... +.++.+++++|++.+ ++++|+ |+ |+.... +.. +...+...|+.+|..+|
T Consensus 80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~-~~~~p~~~Y~~sK~~~e 157 (338)
T d1udca_ 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESF-PTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTS-CCCCCSSHHHHHHHHHH
T ss_pred CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEcccccccccccc-ccCCCcchHHHHHhhhh
Confidence 997532 778899999999998 999987 32 433221 122 23334788999999999
Q ss_pred HHHHH-----cCCCEEEEecceecccccc-ccCCCCC-------------CCCCCCeEEEecC------CCceeEeeccc
Q 021596 140 RAVEA-----EGIPYTYVESYCFDGYFLP-NLLQPGA-------------AAPPRDKVVILGD------GNPKAVYNKED 194 (310)
Q Consensus 140 ~~l~~-----~~~~~~i~rp~~~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~------~~~~~~~i~~~ 194 (310)
+++.+ .+++++++||+.+++.... ....... .......+.+.++ +.+.++|+++.
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~ 237 (338)
T d1udca_ 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence 98864 4789999998887764221 1100000 0012234555553 66778999999
Q ss_pred hHHHHHHHHhcC--CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 195 DIATYTIKAVDD--PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 195 D~a~~~~~~l~~--~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
|++.++..+... ....+++||+.+ .+.+|+.|+++.+.+.+|.+.++...+.
T Consensus 238 D~~~~~~~~~~~~~~~~~~~i~Ni~~-~~~~si~e~~~~i~~~~g~~~~~~~~~~ 291 (338)
T d1udca_ 238 DLADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFAPR 291 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESC-SSCEEHHHHHHHHHHHHTSCCCEEEECC
T ss_pred ehhhhccccccccccccCcceeeecC-CCCCcHHHHHHHHHHHHCCCCceEECCC
Confidence 999887776642 333457788875 4589999999999999998877776654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.7e-32 Score=233.63 Aligned_cols=228 Identities=19% Similarity=0.264 Sum_probs=174.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEE------EEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFV------LVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~------~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|||||||||||||+++++.|+++|++|++ +.+..... .+..........+++++.+|+.+.........++|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG--NRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC--CGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc--cHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence 68999999999999999999999986544 33322211 11111122234679999999999999999999999
Q ss_pred EEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCcc---ccCCCCCCcchhhHHHHH
Q 021596 79 VVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVD---RAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 79 ~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~---~~~~~~~~~~~~y~~~K~ 136 (310)
+|+|+|+... +.++.+++++|++.+ +++||+ | .||.... .++.+..| .+.||.+|.
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p-~~~Y~~sK~ 156 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEP-NSPYAASKA 156 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCC-CSHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCC-CCHHHHHHH
Confidence 9999997643 677899999999998 999998 3 3544321 12214444 678999999
Q ss_pred HHHHHHHH----cCCCEEEEecceeccccc------cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 137 RIRRAVEA----EGIPYTYVESYCFDGYFL------PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~rp~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
.+|.+++. .+++++++||+.++|... +.+... ...++++.++++|++.++|+|++|+|+++..++++
T Consensus 157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~---~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~ 233 (322)
T d1r6da_ 157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTN---LLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233 (322)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHH---HHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHH---HHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhC
Confidence 99998854 589999999888777432 111111 14566788899999999999999999999999987
Q ss_pred CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 207 PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 207 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
+. .+++||+.+ ++.++..|+++.+.+.+|.+.+
T Consensus 234 ~~-~~~~~ni~~-~~~~s~~e~~~~i~~~~~~~~~ 266 (322)
T d1r6da_ 234 GR-AGEIYHIGG-GLELTNRELTGILLDSLGADWS 266 (322)
T ss_dssp CC-TTCEEEECC-CCEEEHHHHHHHHHHHHTCCGG
T ss_pred CC-CCCeeEEee-cccchhHHHHHHHHHHhCCCcc
Confidence 65 467888874 5699999999999999998754
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.5e-32 Score=232.01 Aligned_cols=234 Identities=22% Similarity=0.329 Sum_probs=174.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHH-HhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVN-AIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~-~~~~~d~Vi~ 82 (310)
|||||||||||||++++++|+++|+ +|+++++..+.. . .....++++++++|+++.+.+.+ +++++|+|+|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~----~---~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih 73 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI----S---RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG----G---GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch----h---hhccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence 6899999999999999999999994 899998863221 1 23345789999999988766554 6678999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC---CCCCccc---------cCCCCCCcchhhHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE---FGNDVDR---------AHGAVEPAKSVYYDVK 135 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~~~~~---------~~~~~~~~~~~y~~~K 135 (310)
+|+... +.++.+++++|.+.+ ++.++.|+ |+..... ...+...+...|+.+|
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK 152 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 152 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred ccccccccccccCCcccccccccccccccccccccc-ccccccccccccccccccccccccccccccccCCCcchhhhcc
Confidence 998643 777999999999998 77666543 3332111 0012233467899999
Q ss_pred HHHHHHHHH----cCCCEEEEecceeccccccccCCCCC-----------CCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPGA-----------AAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..+|++++. .+++++++|++.+++........... ..+.++.+.++++|++.++|+|++|+++++
T Consensus 153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~ 232 (342)
T d2blla1 153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 232 (342)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred cchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence 999998864 58999999977776643222111100 002456788899999999999999999999
Q ss_pred HHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 201 IKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 201 ~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
..+++++ ...+++||+++++..+|+.|+++.+.+.+|.+......|
T Consensus 233 ~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~ 280 (342)
T d2blla1 233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFP 280 (342)
T ss_dssp HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSC
T ss_pred eeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccC
Confidence 9999875 345788999755556899999999999999876555544
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=5.6e-32 Score=232.75 Aligned_cols=232 Identities=18% Similarity=0.205 Sum_probs=173.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
||+|||||||||||++|++.|+++|++|.++.++.... .........+...+++++.+|+.|.+.+..++.+++.|+|+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-TCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc-cccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 89999999999999999999999999988877753322 22222334455678999999999999999999999999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEccC---CCCCCccc---------------cCCCCCCcchh
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFPS---EFGNDVDR---------------AHGAVEPAKSV 130 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s---~~~~~~~~---------------~~~~~~~~~~~ 130 (310)
|+... +.++.+++++|+..+ .+.++.| .||..... +..+.. +.+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~-p~s~ 158 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN-PSSP 158 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC-CCSH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCC-CCCH
Confidence 97643 678999999999998 5544442 35431000 111222 3678
Q ss_pred hHHHHHHHHHHHHH----cCCCEEEEecceecccccc--cc-CCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLP--NL-LQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
||.+|..+|++++. .+++++++||+.++|+... .. .........+....+++++++.++|+|++|+|+++..+
T Consensus 159 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~ 238 (346)
T d1oc2a_ 159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence 99999999988864 5899999998888774211 00 00000003455677889999999999999999999998
Q ss_pred hcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 204 VDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 204 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
++++. .++.+++++++ ..+..|+++.+.+.++.+.
T Consensus 239 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 239 LTKGR-MGETYLIGADG-EKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp HHHCC-TTCEEEECCSC-EEEHHHHHHHHHHHTTCCT
T ss_pred Hhhcc-cCccccccccc-cccchHHHHHHHHHhCCCC
Confidence 87665 56778887655 9999999999999998753
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1e-31 Score=232.17 Aligned_cols=229 Identities=20% Similarity=0.220 Sum_probs=169.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|+|||||||||||++|+++|+++|++|++..++.+.. .............+++++++|++|++.+.++++ ++|+|||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA-GNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT-CCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-ccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 6899999999999999999999999876665543322 111111122334679999999999999999988 5899999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcC--------CccEEcc-CC---CCCCccc-------------cCC
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAG--------NVTRFFP-SE---FGNDVDR-------------AHG 122 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~--------~v~~~v~-s~---~~~~~~~-------------~~~ 122 (310)
+|+... +.++.+++++|++.+ ++++||+ |+ ||..... ++
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~- 158 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET- 158 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT-
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC-
Confidence 998643 566889999998764 1447887 32 5432111 11
Q ss_pred CCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccc------cccCCCCCCCCCCCeEEEecCCCceeEeec
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFL------PNLLQPGAAAPPRDKVVILGDGNPKAVYNK 192 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 192 (310)
....+.+.||.+|..+|+++.. .+++++++||+.++|+.. +.+.... ..++++.++++|++.++|+|
T Consensus 159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~---~~g~~~~v~g~g~~~r~~i~ 235 (361)
T d1kewa_ 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNA---LEGKPLPIYGKGDQIRDWLY 235 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHH---HHTCCEEEETTSCCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHH---HcCCCcEEeCCCCeEEeCEE
Confidence 1122467899999999999865 689999999877776421 2222211 34667888899999999999
Q ss_pred cchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCc
Q 021596 193 EDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTL 240 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 240 (310)
++|+|+++..+++.+. .++.||+. .++..+..|+++.+.+.++...
T Consensus 236 v~D~a~ai~~~~~~~~-~~~~~Ni~-s~~~~s~~~~~~~i~~~~~~~~ 281 (361)
T d1kewa_ 236 VEDHARALHMVVTEGK-AGETYNIG-GHNEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHHHHHHHHHHHHHCC-TTCEEEEC-CCCEEEHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCC-CCCeEEEC-CCCCcchHHHHhHhhhhccccc
Confidence 9999999999998765 46788886 4558999999999999876543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.4e-32 Score=231.59 Aligned_cols=227 Identities=16% Similarity=0.261 Sum_probs=165.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+|||||||||||||+++++.|+++|++|++++|..+.. +...........+.+...|+. ..++.++|+|||+
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~---~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~Vihl 72 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR---KRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHL 72 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC---GGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCC---HHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEEC
Confidence 47999999999999999999999999999998754322 111111222334555555553 3456789999999
Q ss_pred ccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----c----cCCCCCCcchhhHHHHH
Q 021596 84 VGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----R----AHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 84 a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~----~~~~~~~~~~~y~~~K~ 136 (310)
|+... +.++.+++++|++.+ + ++|+ || |+.... + +..+.. +.++|+.+|.
T Consensus 73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~-p~~~Y~~sK~ 149 (312)
T d2b69a1 73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIG-PRACYDEGKR 149 (312)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS-TTHHHHHHHH
T ss_pred cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCCCCCCCCccccCCCCCCC-CccHHHHHHH
Confidence 98643 567899999999998 6 4555 43 543211 1 111223 3688999999
Q ss_pred HHHHHHHH----cCCCEEEEecceecccccc--------ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 137 RIRRAVEA----EGIPYTYVESYCFDGYFLP--------NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 137 ~~e~~l~~----~~~~~~i~rp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
.+|.+++. .+++++++||+.++|+... .+.... ..++++.+++++.+.++|+|++|+++++..++
T Consensus 150 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~---~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~ 226 (312)
T d2b69a1 150 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA---LQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 226 (312)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHH---HHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHH---HcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH
Confidence 99998854 5899999998887774321 111111 45667888899999999999999999999988
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
+.. .++.||+++ ++..++.|+++.+++.+|.+.++...+.
T Consensus 227 ~~~--~~~~~n~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 266 (312)
T d2b69a1 227 NSN--VSSPVNLGN-PEEHTILEFAQLIKNLVGSGSEIQFLSE 266 (312)
T ss_dssp TSS--CCSCEEESC-CCEEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred hhc--cCCceEecC-CcccchhhHHHHHHHHhCCCCceEECCC
Confidence 765 467788875 5599999999999999998877665543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2e-29 Score=216.67 Aligned_cols=243 Identities=21% Similarity=0.273 Sum_probs=175.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCC-----CCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLS-----APSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|+ +||||||||||||++|+++|+++|++|++++|..... .+........+...+++++++|++|.+.+.+++.
T Consensus 1 M~--kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 78 (346)
T d1ek6a_ 1 MA--EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK 78 (346)
T ss_dssp CC--SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CC--CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccc
Confidence 77 7999999999999999999999999999997532211 1223333445566789999999999999999887
Q ss_pred --CCCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc---cCCCCCCcchhh
Q 021596 76 --QVDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR---AHGAVEPAKSVY 131 (310)
Q Consensus 76 --~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~---~~~~~~~~~~~y 131 (310)
++++|+|+|+... +.++.+++++|++.+ +++|++ |+ |+..... ...+...+.++|
T Consensus 79 ~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y 157 (346)
T d1ek6a_ 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY 157 (346)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred ccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChH
Confidence 4668999998643 677899999999999 999887 22 4332211 111233346789
Q ss_pred HHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCC---C-----------CCCCCeEEEec------CCCc
Q 021596 132 YDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGA---A-----------APPRDKVVILG------DGNP 186 (310)
Q Consensus 132 ~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~------~~~~ 186 (310)
+.+|..+|+.+.+ .+++++++||+.++|...+....... . ...+..+.+.+ .+.+
T Consensus 158 ~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~ 237 (346)
T d1ek6a_ 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCe
Confidence 9999999988764 48899999988877743221110000 0 01233444443 3566
Q ss_pred eeEeeccchHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 187 KAVYNKEDDIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 187 ~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
.++|+|++|+|.++..++... ...+++||+++ ++..++.|+++.+.+.+|.+.++...|.
T Consensus 238 ~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~-~~~~s~~dl~~~i~~~~~~~~~~~~~~~ 299 (346)
T d1ek6a_ 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYKVVAR 299 (346)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEEEECC
T ss_pred eEeEEEEEeccchhhhhccccccccCceEEEeCC-CCcccHHHHHHHHHHHhCCCCCeEECCC
Confidence 789999999999988876432 33456788875 5589999999999999999887776654
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=8e-31 Score=226.28 Aligned_cols=235 Identities=18% Similarity=0.209 Sum_probs=168.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh---HhhhcCCcEEEEccCCCHHHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL---DHFKNLGVNFVVGDVLNHESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~ 79 (310)
|++||||||||||++|+++|+++|++|++++|..+.....+...+ .....++++++++|++|.+++.++++ ++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 788999999999999999999999999999997543222222111 11234579999999999999999998 5699
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcC--CccEEcc-C---CCCCCccc---cCCCCCCcchhhHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAG--NVTRFFP-S---EFGNDVDR---AHGAVEPAKSVYYDVK 135 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~--~v~~~v~-s---~~~~~~~~---~~~~~~~~~~~y~~~K 135 (310)
|+|+|+... +.++.+++++|++.+ ++++||+ | .||.+... ++.+..| .++|+.+|
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P-~~~Y~~sK 160 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP-RSPYAVAK 160 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC-CSHHHHHH
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCC-CChHHHHH
Confidence 999998643 677899999999876 2346887 3 36643221 2214444 68899999
Q ss_pred HHHHHHHHH----cCCCEEEEecceecccccc-cc----C-CCCCC-CCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 136 ARIRRAVEA----EGIPYTYVESYCFDGYFLP-NL----L-QPGAA-APPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 136 ~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-~~----~-~~~~~-~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
..+|++++. .+++++++||+.++|+... .. . ..... .........++++++.+++++++|+++++..++
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence 999988864 5899999998777664211 10 0 00000 012233556788999999999999999999998
Q ss_pred cCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceee
Q 021596 205 DDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLERE 243 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 243 (310)
+.+ .++.||+++ ++.+|+.|+++.+.+.+|...++.
T Consensus 241 ~~~--~~~~yni~s-g~~~s~~~~~~~~~~~~g~~~~~~ 276 (357)
T d1db3a_ 241 QQE--QPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFE 276 (357)
T ss_dssp SSS--SCCCEEECC-CCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred hCC--CCCeEEECC-CCceehHHHHHHHHHHhCCccccc
Confidence 765 467888875 458999999999999999765544
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.1e-29 Score=215.56 Aligned_cols=238 Identities=19% Similarity=0.277 Sum_probs=165.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|.|||||||||||++|++.|+++|++|++++|...+. .........+...+++++++|+.|.+.+..+++ ++|+|||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih 80 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcc-hhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 5799999999999999999999999999998754433 223333344556789999999999999999887 8999999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCcc-------ccCCCCCCcchhhHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVD-------RAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~-------~~~~~~~~~~~~y~~~K~ 136 (310)
+|+... +.++.+++++|++.+ ++++|+ | .||.... .++.+..| .+.|+.+|.
T Consensus 81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p-~~~Y~~sK~ 158 (347)
T d1z45a2 81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGP-TNPYGHTKY 158 (347)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC-CSHHHHHHH
T ss_pred ccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCC-CChhHhHHH
Confidence 998643 677899999999998 999887 3 3543221 11213333 678999999
Q ss_pred HHHHHHHH------cCCCEEEEecceeccccccccCCCCCC--------------CCCCCeEEEecCC------CceeEe
Q 021596 137 RIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAA--------------APPRDKVVILGDG------NPKAVY 190 (310)
Q Consensus 137 ~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~------~~~~~~ 190 (310)
.+|+++++ .+++++++||+.+++............ .....++.+++++ ....++
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 99998864 368899999776665321110000000 0112234444443 345567
Q ss_pred eccchHHHHHHHHhcC------CccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 191 NKEDDIATYTIKAVDD------PRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~------~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
+++.|.+.++..+++. ....+++||+.+ ++++|+.|+++.+.+.+|.+.++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~ 299 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCKASGIDLPYKVTG 299 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTCCCCC----
T ss_pred eeeecccccccccccccccccccccccccceecC-CCcccHHHHHHHHHHHHCCCCceEeCC
Confidence 7777777877776642 223467788864 569999999999999999987765443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=2.2e-29 Score=216.04 Aligned_cols=232 Identities=19% Similarity=0.184 Sum_probs=174.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhH----hhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLD----HFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~----~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
+|+|||||||||||++|+++|+++||+|++++|..... ........ ......++++.+|..|...+.....+++.
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 57999999999999999999999999999999854332 11111111 12345789999999999999999999999
Q ss_pred EEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc-C---CCCCCcc---ccCCCCCCcchhhHHHHHH
Q 021596 80 VISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-S---EFGNDVD---RAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 80 Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s---~~~~~~~---~~~~~~~~~~~~y~~~K~~ 137 (310)
|+|+++... +.++.+++++|++++ ++++|+ | .||.... .++.+..| .+.|+.+|..
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~ 172 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKP-LSPYAVTKYV 172 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCC-CSHHHHHHHH
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCC-CCcchHHHHH
Confidence 999987542 778999999999998 999988 3 3554321 12214444 7899999999
Q ss_pred HHHHHHH----cCCCEEEEecceeccccc-cccCCCCC------CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 138 IRRAVEA----EGIPYTYVESYCFDGYFL-PNLLQPGA------AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 138 ~e~~l~~----~~~~~~i~rp~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|++++. .+++++++||+.++|... +......+ ..+.++.+.++++|.+.++|+|++|++.++..++..
T Consensus 173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~ 252 (341)
T d1sb8a_ 173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 252 (341)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence 9998864 579999999886665422 11111000 013456688889999999999999999999998876
Q ss_pred Cc-cCCceEEEcCCCCccCHHHHHHHHHHHhCCC
Q 021596 207 PR-TLNKNLYIQPPGNIYSFNDLVSLWERKIGKT 239 (310)
Q Consensus 207 ~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 239 (310)
+. ..++.|++. .++..|+.|+++.+.+.++.+
T Consensus 253 ~~~~~~~~~~~~-~~~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 253 GLDARNQVYNIA-VGGRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp CGGGCSEEEEES-CSCCEEHHHHHHHHHHHHHHT
T ss_pred cccccceeeeec-ccccchHHHHHHHHHHHhccc
Confidence 53 356677776 455899999999999998865
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=1.1e-29 Score=216.02 Aligned_cols=230 Identities=15% Similarity=0.145 Sum_probs=171.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
|+|||||||||||++|++.|+++||+|++++|..+... ...++.+ ..++++++.+|+.|.+.+.+.+. ..++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~---~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 77 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT---RWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 77 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC---CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc---HHHHHHhcccCCcEEEEccccChHHhhhhhccccccccc
Confidence 68999999999999999999999999999999865431 1222333 24578999999999999998887 578888
Q ss_pred Ecccchh---------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCccc---cCCCCCCcchhhHHHHHHHH
Q 021596 82 STVGHAL---------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVDR---AHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 82 ~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~~---~~~~~~~~~~~y~~~K~~~e 139 (310)
|+++... +.++.+++++|++.+..++|++ |+ |+..... ++.+.. +.+.|+.+|..+|
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~-p~~~Y~~sK~~~E 156 (321)
T d1rpna_ 78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY-PRSPYGVAKLYGH 156 (321)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC-CCSHHHHHHHHHH
T ss_pred cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcc-ccChhHHHHHHHH
Confidence 8887543 6778999999999984456776 32 3332211 221333 4789999999999
Q ss_pred HHHHH----cCCCEEEEecceeccccc-ccc-----CCCCC-CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 140 RAVEA----EGIPYTYVESYCFDGYFL-PNL-----LQPGA-AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 140 ~~l~~----~~~~~~i~rp~~~~~~~~-~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
++++. .+++++++||+.++|+.. ... ..... ....+.....++++++.++|+|++|+|+++..+++++.
T Consensus 157 ~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~ 236 (321)
T d1rpna_ 157 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 236 (321)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC
Confidence 98864 689999999876666431 111 00000 00234455678899999999999999999999998774
Q ss_pred cCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 209 TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 209 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
++.||+.++ +..|..++++.+.+.+|.+.+
T Consensus 237 --~~~~ni~~~-~~~s~~~~~~~~~~~~~~~~~ 266 (321)
T d1rpna_ 237 --ADDYVVATG-VTTTVRDMCQIAFEHVGLDYR 266 (321)
T ss_dssp --CCCEEECCS-CEEEHHHHHHHHHHTTTCCGG
T ss_pred --cCCceeccc-ccceehhhhHHHHHHhCCCcc
Confidence 567888755 599999999999999998643
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.97 E-value=1.8e-28 Score=210.97 Aligned_cols=235 Identities=14% Similarity=0.134 Sum_probs=177.5
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH-HHHHHHhcCCCEEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH-ESLVNAIKQVDVVI 81 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~~~~~~~~~d~Vi 81 (310)
++|+|+|||||||||+++++.|+++||+|++++|+.++ .........++++++++|+.|. +.+..++.++|+++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~ 76 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-----LIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF 76 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS-----HHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch-----hhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence 36899999999999999999999999999999998543 2222223456899999999885 55778899999999
Q ss_pred Ecccchh---hhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEEEEecceec
Q 021596 82 STVGHAL---LADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYTYVESYCFD 158 (310)
Q Consensus 82 ~~a~~~~---~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~i~rp~~~~ 158 (310)
+...... ...+.+++++|.+.|..+++++|+.+...... ..+ ...|..+|...+.++++.+++++++||+.|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~---~~~-~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~ 152 (350)
T d1xgka_ 77 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG---PWP-AVPMWAPKFTVENYVRQLGLPSTFVYAGIYN 152 (350)
T ss_dssp ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS---SCC-CCTTTHHHHHHHHHHHTSSSCEEEEEECEEG
T ss_pred eecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC---ccc-chhhhhhHHHHHHHHHhhccCceeeeeceee
Confidence 8876543 67789999999999933445567765433221 122 2334489999999999999999999999999
Q ss_pred cccccccCCCCCCC-CCC--CeEEEecCCCceeEeecc-chHHHHHHHHhcCC--ccCCceEEEcCCCCccCHHHHHHHH
Q 021596 159 GYFLPNLLQPGAAA-PPR--DKVVILGDGNPKAVYNKE-DDIATYTIKAVDDP--RTLNKNLYIQPPGNIYSFNDLVSLW 232 (310)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~ 232 (310)
+++........... ... .....+..++..++++++ +|+++++..++.++ ...|+.|++.+ +.+|+.|+++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g--~~~T~~eia~~l 230 (350)
T d1xgka_ 153 NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--ETLSPVQVCAAF 230 (350)
T ss_dssp GGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--EEECHHHHHHHH
T ss_pred ccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC--CcCCHHHHHHHH
Confidence 98654322221100 112 234556677888999986 79999999999654 34577777763 479999999999
Q ss_pred HHHhCCCceeeecCHH
Q 021596 233 ERKIGKTLEREYVSEE 248 (310)
Q Consensus 233 ~~~~g~~~~~~~~~~~ 248 (310)
++++|+++++..+|.+
T Consensus 231 ~~~~G~~v~~~~vp~~ 246 (350)
T d1xgka_ 231 SRALNRRVTYVQVPKV 246 (350)
T ss_dssp HHHHTSCEEEEECSSC
T ss_pred HHHHCCcceEEECCHH
Confidence 9999999999999854
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=1.4e-28 Score=215.01 Aligned_cols=231 Identities=19% Similarity=0.210 Sum_probs=164.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEc-------------CCCCC--CCchhhHhHhhhcCCcEEEEccCCCHHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVR-------------ESTLS--APSKSQLLDHFKNLGVNFVVGDVLNHES 69 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R-------------~~~~~--~~~~~~~~~~l~~~~~~~v~~D~~d~~~ 69 (310)
|||||||||||||++|++.|+++||+|++++. +.... ..........+...+++++.+|++|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 79999999999999999999999999999851 11111 0111122233445789999999999999
Q ss_pred HHHHhc--CCCEEEEcccchh------------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc---c---
Q 021596 70 LVNAIK--QVDVVISTVGHAL------------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD---R--- 119 (310)
Q Consensus 70 ~~~~~~--~~d~Vi~~a~~~~------------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~---~--- 119 (310)
+.++++ ++|+|||+|+... +.++.+++++|++.+..+++++ |+ |+.... +
T Consensus 82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~ 161 (393)
T d1i24a_ 82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYI 161 (393)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEE
T ss_pred HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccccc
Confidence 999998 5799999997432 6778999999999883445655 32 221110 0
Q ss_pred ----------cCCCCCCcchhhHHHHHHHHHHHH----HcCCCEEEEecceeccccccc------cCCC----CC-----
Q 021596 120 ----------AHGAVEPAKSVYYDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPN------LLQP----GA----- 170 (310)
Q Consensus 120 ----------~~~~~~~~~~~y~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~------~~~~----~~----- 170 (310)
...+.. +.+.|+.+|..+|.++. +.+++++++||+.++|..... +... ..
T Consensus 162 ~~~~~~~~~~~~~~~~-p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 162 TITHNGRTDTLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEETTEEEEEECCCC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred cccccccccccccccc-cccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 000222 35789999999998875 468999999988877743211 0000 00
Q ss_pred -----CCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHh
Q 021596 171 -----AAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKI 236 (310)
Q Consensus 171 -----~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 236 (310)
....+.++.+++++.+.++|+|++|++.++..+++++...+..+.+.+.++.+|+.|+++.+.+..
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~ 311 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAG 311 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHH
Confidence 002355688889999999999999999999999987765555433333455899999999998875
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.96 E-value=3.5e-29 Score=208.82 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=181.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|||||||||||||++|+++|.++||+|++++|+ ..|+.|.+++.++++ ++|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~-----------------------~~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech-----------------------hccCCCHHHHHHHHHHcCCCEEEe
Confidence 789999999999999999999999999999987 258999999999998 6899999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC---CCCC----ccccCCCCCCcchhhHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE---FGND----VDRAHGAVEPAKSVYYDVKARIRR 140 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~~----~~~~~~~~~~~~~~y~~~K~~~e~ 140 (310)
+++... ......+.+++...+ ...++.|+ |+.. ..+.+ +.. +...|+.+|...|+
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~-~~~-~~~~~~~~k~~~e~ 135 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFD-EVN-PQSAYGKTKLEGEN 135 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTS-CCC-CCSHHHHHHHHHHH
T ss_pred eccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccc-ccc-chhhhhhhhhHHHH
Confidence 998654 344556777777766 44444432 2222 11222 233 46789999999999
Q ss_pred HHHHcCCCEEEEecceeccccccc---cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEEc
Q 021596 141 AVEAEGIPYTYVESYCFDGYFLPN---LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYIQ 217 (310)
Q Consensus 141 ~l~~~~~~~~i~rp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~~ 217 (310)
++++.+.+++++||+.++|..... +.... ..+....+.+ +..+++++++|+++++..+++.+. .+.+|+.
T Consensus 136 ~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~ 208 (281)
T d1vl0a_ 136 FVKALNPKYYIVRTAWLYGDGNNFVKTMINLG---KTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCT 208 (281)
T ss_dssp HHHHHCSSEEEEEECSEESSSSCHHHHHHHHH---HHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECC
T ss_pred HHHHhCCCccccceeEEeCCCcccccchhhhh---ccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEe
Confidence 999999999999999988753221 11110 2344455544 678999999999999999998764 4688887
Q ss_pred CCCCccCHHHHHHHHHHHhCCCceeeecCHHHHHHHHHhcCCCcchhHHhhhheeEecccccccCCCCccccccccCCCC
Q 021596 218 PPGNIYSFNDLVSLWERKIGKTLEREYVSEEQLLKNIQEAAPPQNVILSIYHSVFMNGVQTNFEIEPSFGVEASQLFPDV 297 (310)
Q Consensus 218 ~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 297 (310)
+++ .+|+.|+++.+.+.+|++.++.+++.+++ +.+.. ++ .+..++. .++.+.+ |+
T Consensus 209 ~~~-~~s~~e~~~~i~~~~g~~~~i~~i~~~~~-------~~~a~-----------rp--~~~~ld~---~k~~~~~-g~ 263 (281)
T d1vl0a_ 209 CKG-ICSWYDFAVEIFRLTGIDVKVTPCTTEEF-------PRPAK-----------RP--KYSVLRN---YMLELTT-GD 263 (281)
T ss_dssp CBS-CEEHHHHHHHHHHHHCCCCEEEEECSTTS-------CCSSC-----------CC--SBCCBCC---HHHHHTT-CC
T ss_pred CCC-ccchHHHHHHHHHHhCCCceEEeccHHHc-------CCcCC-----------Cc--cccccCH---HHHHHHh-CC
Confidence 654 89999999999999999998888775432 11100 00 0011222 4566777 88
Q ss_pred cccCHHHHHHhhC
Q 021596 298 KYTTVDEYLNQFV 310 (310)
Q Consensus 298 ~~~~~~e~l~~~~ 310 (310)
++.+++|.|++++
T Consensus 264 ~~~~~~~~l~~~l 276 (281)
T d1vl0a_ 264 ITREWKESLKEYI 276 (281)
T ss_dssp CCCBHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 8889999998864
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.3e-28 Score=211.71 Aligned_cols=238 Identities=18% Similarity=0.202 Sum_probs=172.4
Q ss_pred ceE-EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh----HhhhcCCcEEEEccCCCHHHHHHHhc--CC
Q 021596 5 SKI-LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL----DHFKNLGVNFVVGDVLNHESLVNAIK--QV 77 (310)
Q Consensus 5 ~~I-lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~l~~~~~~~v~~D~~d~~~~~~~~~--~~ 77 (310)
||| ||||||||||++|+++|+++||+|++++|..+..+..+.+.+ ......+++++.+|++|.+.+..++. ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 999999999999999999999999999998654322222111 11112468999999999999999997 68
Q ss_pred CEEEEcccchh---------------hhhHHHHHHHHHHcCCc---cEEcc-C---CCCCCccc---cCCCCCCcchhhH
Q 021596 78 DVVISTVGHAL---------------LADQVKIIAAIKEAGNV---TRFFP-S---EFGNDVDR---AHGAVEPAKSVYY 132 (310)
Q Consensus 78 d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v---~~~v~-s---~~~~~~~~---~~~~~~~~~~~y~ 132 (310)
++|+|+++... +.++.+++++|++++ + ++||+ | .||..... ++.+..| .++||
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P-~~~Yg 158 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYP-RSPYG 158 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC-CSHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchheecCCCCCCCCCCCCCCC-CCHHH
Confidence 89999887542 567899999999986 4 37777 3 36643211 2224444 78899
Q ss_pred HHHHHHHHHHHH----cCCCEEEEecceecccccc-ccC-----CCC-CCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 133 DVKARIRRAVEA----EGIPYTYVESYCFDGYFLP-NLL-----QPG-AAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 133 ~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~-~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.+|..+|+++.. .+++++++||+.++|+... ... ... ...........++++++.+++++++|++.++.
T Consensus 159 ~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~ 238 (347)
T d1t2aa_ 159 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW 238 (347)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHH
Confidence 999999998854 5899999997777664211 100 000 00023445777889999999999999999999
Q ss_pred HHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 202 KAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 202 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
.+++... .+.+++. .....+..+....+...+++.+.....+.
T Consensus 239 ~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (347)
T d1t2aa_ 239 LMLQNDE--PEDFVIA-TGEVHSVREFVEKSFLHIGKTIVWEGKNE 281 (347)
T ss_dssp HHHHSSS--CCCEEEC-CSCCEEHHHHHHHHHHHTTCCEEEESCGG
T ss_pred HHhhcCC--Cccceec-cccccccchhhhhhhhhhcceeeecccch
Confidence 9998764 3456665 45589999999999999998765554443
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=5.6e-27 Score=204.00 Aligned_cols=239 Identities=18% Similarity=0.260 Sum_probs=166.8
Q ss_pred ceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCC-----CCCchhhHhHhh----------hcCCcEEEEccCCCHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTL-----SAPSKSQLLDHF----------KNLGVNFVVGDVLNHE 68 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~-----~~~~~~~~~~~l----------~~~~~~~v~~D~~d~~ 68 (310)
|||||||||||||++|+++|++ .||+|+++++-... ....+......+ ....+.++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 6999999999999999999996 67999998742111 001112111111 1235889999999999
Q ss_pred HHHHHhc---CCCEEEEcccchh---------------hhhHHHHHHHHHHcCCccEEcc----CCCCCCccc-------
Q 021596 69 SLVNAIK---QVDVVISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFP----SEFGNDVDR------- 119 (310)
Q Consensus 69 ~~~~~~~---~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~----s~~~~~~~~------- 119 (310)
.+.++++ ++|+|||+|+... ..++.+++++|++.+ ++++++ +.|+.....
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccccc
Confidence 9999986 6799999998643 777899999999998 888776 123321110
Q ss_pred ---cCCCCCCcchhhHHHHHHHHHHHHH----cCCCEEEEecceeccccccccCCCC-----------------------
Q 021596 120 ---AHGAVEPAKSVYYDVKARIRRAVEA----EGIPYTYVESYCFDGYFLPNLLQPG----------------------- 169 (310)
Q Consensus 120 ---~~~~~~~~~~~y~~~K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~~~~~----------------------- 169 (310)
++ ....+.++|+.+|...|++++. .+++++++||+.++|..........
T Consensus 162 ~~~e~-~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 162 PIDIN-AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CBCTT-SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred ccccc-cCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence 11 2222478899999999998865 6899999998777764321110000
Q ss_pred -----CCCCCCCeEEEec------CCCceeEeeccchHHHHHHHHhcCC--------ccCCceEEEcCCCCccCHHHHHH
Q 021596 170 -----AAAPPRDKVVILG------DGNPKAVYNKEDDIATYTIKAVDDP--------RTLNKNLYIQPPGNIYSFNDLVS 230 (310)
Q Consensus 170 -----~~~~~~~~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~--------~~~~~~~~~~~~~~~~s~~e~~~ 230 (310)
.....+..+.+++ +|.+.++|+|++|+++++..+++.. ...+++||+. +++.+|+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~-s~~~~s~~el~~ 319 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLG-TSRGYSVREVIE 319 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEES-CSCCEEHHHHHH
T ss_pred cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeC-CCCceeHHHHHH
Confidence 0002233445544 3677789999999999999988532 2234677776 456899999999
Q ss_pred HHHHHhCCCceeeecC
Q 021596 231 LWERKIGKTLEREYVS 246 (310)
Q Consensus 231 ~~~~~~g~~~~~~~~~ 246 (310)
.+.+.+|.+.++...+
T Consensus 320 ~i~~~~~~~~~~~~~~ 335 (383)
T d1gy8a_ 320 VARKTTGHPIPVRECG 335 (383)
T ss_dssp HHHHHHCCCCCEEEEC
T ss_pred HHHHHhCCCCceEECC
Confidence 9999999987776654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=4.5e-28 Score=207.51 Aligned_cols=233 Identities=12% Similarity=0.161 Sum_probs=164.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh----HhhhcCCcEEEEccCCCHHHHHHHhc--CC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL----DHFKNLGVNFVVGDVLNHESLVNAIK--QV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~l~~~~~~~v~~D~~d~~~~~~~~~--~~ 77 (310)
+|++||||||||||++|++.|+++||+|++++|..+..+..+...+ .......++++.+|+.+.+.+...++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 4799999999999999999999999999999997653322222111 12234568899999999999999887 68
Q ss_pred CEEEEcccchh---------------hhhHHHHHHHHHHcC----CccEEcc-CC---CCCC---ccccCCCCCCcchhh
Q 021596 78 DVVISTVGHAL---------------LADQVKIIAAIKEAG----NVTRFFP-SE---FGND---VDRAHGAVEPAKSVY 131 (310)
Q Consensus 78 d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~----~v~~~v~-s~---~~~~---~~~~~~~~~~~~~~y 131 (310)
|+|+|+|+... ..++.+++++++... ...++++ |+ ++.. ..+.. +..| .+.|
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~-~~~p-~~~Y 158 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT-PFHP-RSPY 158 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS-CCCC-CSHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC-CCCC-cchh
Confidence 99999998643 555788888887643 1234554 22 2221 12222 4444 7899
Q ss_pred HHHHHHHHHHHH----HcCCCEEEEecceeccccccc-cCCCCC------CCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 132 YDVKARIRRAVE----AEGIPYTYVESYCFDGYFLPN-LLQPGA------AAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 132 ~~~K~~~e~~l~----~~~~~~~i~rp~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
+.+|..+|+++. ..+++++++||+.++|+..+. .....+ ...........+++.+.+++++++|++.++
T Consensus 159 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~ 238 (339)
T d1n7ha_ 159 AASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 238 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHH
Confidence 999999998874 368999999987777753211 100000 001233456678889999999999999999
Q ss_pred HHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhCCCce
Q 021596 201 IKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLE 241 (310)
Q Consensus 201 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 241 (310)
..+++.+. ...+++.. +...+..++++.+.+.+|...+
T Consensus 239 ~~~~~~~~--~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~ 276 (339)
T d1n7ha_ 239 WLMLQQEK--PDDYVVAT-EEGHTVEEFLDVSFGYLGLNWK 276 (339)
T ss_dssp HHHHTSSS--CCEEEECC-SCEEEHHHHHHHHHHHTTCCGG
T ss_pred HHHHhcCC--CCcccccc-ccccccchhhhhhhhhhhcccC
Confidence 99998875 34455553 4589999999999999997643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.96 E-value=1.4e-27 Score=204.14 Aligned_cols=237 Identities=16% Similarity=0.175 Sum_probs=170.5
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhcC--CCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIKQ--VDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~~--~d~Vi~ 82 (310)
||||||||||||++|++.|+++|++|+++++-.... +...+..+ ...+++++.+|+.|.+++.+++++ +|+|||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~---~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih 78 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKG---ATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH 78 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTT---HHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccc---chhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence 899999999999999999999999999987543221 22222222 346799999999999999999984 699999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccE-EccCCC----CCCccc-------------------cCCC
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTR-FFPSEF----GNDVDR-------------------AHGA 123 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~-~v~s~~----~~~~~~-------------------~~~~ 123 (310)
+|+... +.++.+++++|.+.+ +++ +++||. +..... .. .
T Consensus 79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 156 (338)
T d1orra_ 79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES-T 156 (338)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT-S
T ss_pred ecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccC-C
Confidence 998643 778899999999998 655 444331 111000 00 1
Q ss_pred CCCcchhhHHHHHHHHHHHH----HcCCCEEEEecc-eeccccccccCCCCC----------CCCCCCeEEEecCCCcee
Q 021596 124 VEPAKSVYYDVKARIRRAVE----AEGIPYTYVESY-CFDGYFLPNLLQPGA----------AAPPRDKVVILGDGNPKA 188 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~----~~~~~~~i~rp~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 188 (310)
...+.+.|+.+|...|.+.. ..+....++|+. .+++........... ....+..+.++++|.+.+
T Consensus 157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r 236 (338)
T d1orra_ 157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 236 (338)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence 11236789999999988764 467888888844 443432221110000 012356688899999999
Q ss_pred EeeccchHHHHHHHHhcCCc-cCCceEEEc-CCCCccCHHHHHHHHHHHhCCCceeeecCH
Q 021596 189 VYNKEDDIATYTIKAVDDPR-TLNKNLYIQ-PPGNIYSFNDLVSLWERKIGKTLEREYVSE 247 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~-~~~~~~~~~-~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 247 (310)
+|+|++|+++++..+++.+. ..++++++. +.+..+++.|+++.+.+.+|.+.++...+.
T Consensus 237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~ 297 (338)
T d1orra_ 237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV 297 (338)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC
T ss_pred eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC
Confidence 99999999999999997753 456778874 345578999999999999999877776653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=3.1e-28 Score=208.78 Aligned_cols=226 Identities=17% Similarity=0.133 Sum_probs=158.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh---h--cCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---K--NLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l---~--~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
.++|||||||||||++|++.|+++|++|++++|+ .++...+..+ . ......+.+|+.|.+++.+++.++|
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC-----chhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence 3799999999999999999999999999999998 3333322221 1 1224567899999999999999999
Q ss_pred EEEEcccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCC---Ccc--c--------------------c
Q 021596 79 VVISTVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGN---DVD--R--------------------A 120 (310)
Q Consensus 79 ~Vi~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~---~~~--~--------------------~ 120 (310)
+|+|+++... +.++.+++++|.+.+.+++||+ |+... ... . .
T Consensus 86 ~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 165 (342)
T d1y1pa1 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred hhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence 9999998754 6778999999999755999988 54211 000 0 0
Q ss_pred CCCCCCcchhhHHHHHHHHHHHH----Hc--CCCEEEEecceeccccccccCCCCC-----CC-CCCCeEEEecCCCcee
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVE----AE--GIPYTYVESYCFDGYFLPNLLQPGA-----AA-PPRDKVVILGDGNPKA 188 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~----~~--~~~~~i~rp~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~ 188 (310)
......+...|+.+|..+|+++. ++ +++++++||+.++|........... .. ..+.. .....++..+
T Consensus 166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~-~~~~~~~~~~ 244 (342)
T d1y1pa1 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEV-SPALALMPPQ 244 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCC-CHHHHTCCSE
T ss_pred ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCc-CcccCCccce
Confidence 00122245779999999998654 33 4667888988877753221111000 00 11222 2222345668
Q ss_pred EeeccchHHHHHHHHhcCCccCCceEEEcCCCCccCHHHHHHHHHHHhC
Q 021596 189 VYNKEDDIATYTIKAVDDPRTLNKNLYIQPPGNIYSFNDLVSLWERKIG 237 (310)
Q Consensus 189 ~~i~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 237 (310)
+|+|++|+|++++.+++++...+ .+|++.+ +.+|+.|+++.+.+.++
T Consensus 245 ~~v~v~Dva~~~i~~l~~~~~~g-~~~~~~~-~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 245 YYVSAVDIGLLHLGCLVLPQIER-RRVYGTA-GTFDWNTVLATFRKLYP 291 (342)
T ss_dssp EEEEHHHHHHHHHHHHHCTTCCS-CEEEECC-EEECHHHHHHHHHHHCT
T ss_pred eeeeHHHHHHHHHHhhcCccccc-eEEEEcC-CceEHHHHHHHHHHHcC
Confidence 99999999999999998877544 4666654 58999999999999874
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.1e-26 Score=196.90 Aligned_cols=219 Identities=18% Similarity=0.243 Sum_probs=164.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
+|||||||||||||++|+++|+++|+.|+++.+.. +.|+.|.+.+.++++ ++|.|+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d~v~ 59 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVY 59 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhcCCCEEE
Confidence 57999999999999999999999999887665431 258899999998887 689999
Q ss_pred Ecccchh----------------hhhHHHHHHHHHHcCCccEEcc-CC---CCCCcc----cc---CCCCCCcchhhHHH
Q 021596 82 STVGHAL----------------LADQVKIIAAIKEAGNVTRFFP-SE---FGNDVD----RA---HGAVEPAKSVYYDV 134 (310)
Q Consensus 82 ~~a~~~~----------------~~~~~~~~~aa~~~~~v~~~v~-s~---~~~~~~----~~---~~~~~~~~~~y~~~ 134 (310)
|+++... +.++.+++++|++.+ +++||+ |+ ||.... +. ..+..++.++|+.+
T Consensus 60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~s 138 (315)
T d1e6ua_ 60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIA 138 (315)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHH
Confidence 9986532 678899999999998 999988 43 553221 11 11233446789999
Q ss_pred HHHHHHHHHH----cCCCEEEEecceecccccccc-CCCC-----------CCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 135 KARIRRAVEA----EGIPYTYVESYCFDGYFLPNL-LQPG-----------AAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 135 K~~~e~~l~~----~~~~~~i~rp~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|.++|++++. .+++++++||+.++|...... .... .....+..+...+++...+++++++|++.
T Consensus 139 K~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~ 218 (315)
T d1e6ua_ 139 KIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218 (315)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHH
Confidence 9999998863 589999999888777421100 0000 00034566788888899999999999999
Q ss_pred HHHHHhcCCc--------cCCceEEEcCCCCccCHHHHHHHHHHHhCCCceeeecC
Q 021596 199 YTIKAVDDPR--------TLNKNLYIQPPGNIYSFNDLVSLWERKIGKTLEREYVS 246 (310)
Q Consensus 199 ~~~~~l~~~~--------~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 246 (310)
++..++.... .....+++.. +...+..++++.+.+.+|.+..+...+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~i~~~~~~~~~i~~~~ 273 (315)
T d1e6ua_ 219 ASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIAKVVGYKGRVVFDA 273 (315)
T ss_dssp HHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred HHHHhhhhccccccccccccccccccCC-CcchHHHHHHHHHHHHhCCCcceEECC
Confidence 9999886542 1345566654 458999999999999999988776554
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=5e-27 Score=191.60 Aligned_cols=216 Identities=15% Similarity=0.136 Sum_probs=155.3
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCC--EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHP--TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.|++|||||||||||+++++.|+++|++ |+.+.|+ +++. ..+ ..+++++.+|+.|.+++.++++++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~-----~~~~---~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGK---EKI-GGEADVFIGDITDADSINPAFQGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESC-----HHHH---HHT-TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCC-----HHHH---Hhc-cCCcEEEEeeeccccccccccccceee
Confidence 5789999999999999999999999976 5566776 3332 222 467999999999999999999999999
Q ss_pred EEcccchh----------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 81 ISTVGHAL----------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 81 i~~a~~~~----------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
+|+++... ..++.++++.+...+ .+++.+ |+.+....... ........|
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~-~~~~~~~~~ 150 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHP-LNKLGNGNI 150 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCG-GGGGGGCCH
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcc-cccccccch
Confidence 99997543 457888999998887 777665 43332211111 111123456
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCC
Q 021596 132 YDVKARIRRAVEAEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLN 211 (310)
Q Consensus 132 ~~~K~~~e~~l~~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 211 (310)
...+...+.+....+++++++||+.++++........ ..... .......++++++|+|++++.++++++..|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~-----~~~~~---~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g 222 (252)
T d2q46a1 151 LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELL-----VGKDD---ELLQTDTKTVPRADVAEVCIQALLFEEAKN 222 (252)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEE-----EESTT---GGGGSSCCEEEHHHHHHHHHHHTTCGGGTT
T ss_pred hhhhhhhhhhhhcccccceeecceEEECCCcchhhhh-----hccCc---ccccCCCCeEEHHHHHHHHHHHhCCccccC
Confidence 6778888888888999999999999988642211000 00000 011334579999999999999999988888
Q ss_pred ceEEEcCCC--CccCHHHHHHHHHHHhC
Q 021596 212 KNLYIQPPG--NIYSFNDLVSLWERKIG 237 (310)
Q Consensus 212 ~~~~~~~~~--~~~s~~e~~~~~~~~~g 237 (310)
++|+++++. ...+..|+.+++.++.+
T Consensus 223 ~~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 223 KAFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred cEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 999997543 24567778777766554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.1e-27 Score=192.27 Aligned_cols=191 Identities=17% Similarity=0.137 Sum_probs=142.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+++|+|||||||||++++++|+++| ++|++++|+...... .....++...+|+.+.+++.++++++|+||
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--------~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi 85 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--------EAYKNVNQEVVDFEKLDDYASAFQGHDVGF 85 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--------GGGGGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--------cccceeeeeeeccccccccccccccccccc
Confidence 4789999999999999999999999 489999998654311 123467888899999999999999999999
Q ss_pred Ecccchh------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCC
Q 021596 82 STVGHAL------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIP 148 (310)
Q Consensus 82 ~~a~~~~------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~ 148 (310)
|+++... ...+.+++++|++.+ +++||+ |+.+... .....|+.+|..+|+.+++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~--------~~~~~Y~~~K~~~E~~l~~~~~~ 156 (232)
T d2bkaa1 86 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK--------SSNFLYLQVKGEVEAKVEELKFD 156 (232)
T ss_dssp ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT--------TCSSHHHHHHHHHHHHHHTTCCS
T ss_pred ccccccccccchhhhhhhcccccceeeecccccC-ccccccCCcccccc--------CccchhHHHHHHhhhcccccccc
Confidence 9998643 667789999999999 999998 6665432 12467999999999999999986
Q ss_pred -EEEEecceeccccccc-cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCccCCceEEE
Q 021596 149 -YTYVESYCFDGYFLPN-LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPRTLNKNLYI 216 (310)
Q Consensus 149 -~~i~rp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 216 (310)
++|+||+.++|+.... +... +..........+......|+++|+|++++.++.++.. ++.+.+
T Consensus 157 ~~~IlRP~~i~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~ 221 (232)
T d2bkaa1 157 RYSVFRPGVLLCDRQESRPGEW----LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELL 221 (232)
T ss_dssp EEEEEECCEEECTTGGGSHHHH----HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEE
T ss_pred ceEEecCceeecCCCcCcHHHH----HHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEE
Confidence 8999999999863221 0000 0000011122233334578999999999999877753 344444
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.93 E-value=1.3e-25 Score=193.36 Aligned_cols=237 Identities=14% Similarity=0.134 Sum_probs=167.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hcCCcEEEEccCCCHHHHHHHhc--CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KNLGVNFVVGDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~~~~~~~--~~d~V 80 (310)
.|||||||||||||+++++.|+++|++|++++|+.++. +... +.. ..++++++.+|++|++.+.++++ .+|+|
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~-~~~~---~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v 83 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLF---ETARVADGMQSEIGDIRDQNKLLESIREFQPEIV 83 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHH---HHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc-HHHH---hhhhcccCCeEEEeeccChHhhhhhhhhchhhhh
Confidence 48999999999999999999999999999999986554 2111 111 23579999999999999999988 68999
Q ss_pred EEcccchh---------------hhhHHHHHHHHHHcCCccEEccCCCCC----C----ccccCCCCCCcchhhHHHHHH
Q 021596 81 ISTVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSEFGN----D----VDRAHGAVEPAKSVYYDVKAR 137 (310)
Q Consensus 81 i~~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~~~~----~----~~~~~~~~~~~~~~y~~~K~~ 137 (310)
+|+++... +.++.+++++|++.+..+.+++++.+. . ...++.+.. +.++|+.+|..
T Consensus 84 ~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-p~~~y~~~k~~ 162 (356)
T d1rkxa_ 84 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG-GYDPYSNSKGC 162 (356)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC-CSSHHHHHHHH
T ss_pred hhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccC-CCCcccccccc
Confidence 99998643 667899999999987455566532111 1 111221223 36789999999
Q ss_pred HHHHHHH-------------cCCCEEEEecceeccccc---cccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 138 IRRAVEA-------------EGIPYTYVESYCFDGYFL---PNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 138 ~e~~l~~-------------~~~~~~i~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
.|..++. .++.++++||+.++|+.- ..+.........++....++.+++.+++++++|++.++.
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~ 242 (356)
T d1rkxa_ 163 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYL 242 (356)
T ss_dssp HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHH
T ss_pred chhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhh
Confidence 9877652 367899999887665421 111100000123445567888889999999999999999
Q ss_pred HHhcCCccC----CceEEE-cCCCCccCHHHHHHHHHHHhCCCceeeec
Q 021596 202 KAVDDPRTL----NKNLYI-QPPGNIYSFNDLVSLWERKIGKTLEREYV 245 (310)
Q Consensus 202 ~~l~~~~~~----~~~~~~-~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 245 (310)
.++..+... +...+. .+..+..+..++++.+.+.++.+.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 291 (356)
T d1rkxa_ 243 LLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD 291 (356)
T ss_dssp HHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-
T ss_pred hhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEc
Confidence 888654321 222222 23355789999999999999988766543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=1.7e-23 Score=166.89 Aligned_cols=176 Identities=16% Similarity=0.191 Sum_probs=124.2
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDV 79 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~ 79 (310)
++|+|||||||||||++++++|+++|+ +|.+++|+.... .+. +..+..|..++...+. ++|+
T Consensus 1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~---~~~~~~d~~~~~~~~~~~~d~ 65 (212)
T d2a35a1 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPR---LDNPVGPLAELLPQLDGSIDT 65 (212)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTT---EECCBSCHHHHGGGCCSCCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------ccc---ccccccchhhhhhccccchhe
Confidence 368999999999999999999999997 566666663221 112 2445555555554444 6899
Q ss_pred EEEcccchh-------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHc
Q 021596 80 VISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAE 145 (310)
Q Consensus 80 Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~ 145 (310)
|||+++... ...+.+++++|++.+ ++++++ |+.+... ...+.|+.+|..+|+.+++.
T Consensus 66 vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~--------~~~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 66 AFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA--------KSSIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp EEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT--------TCSSHHHHHHHHHHHHHTTS
T ss_pred eeeeeeeeccccccccccccchhhhhhhccccccccc-cccccccccccccc--------ccccchhHHHHHHhhhcccc
Confidence 999987653 667789999999998 999988 7666432 12467989999999999998
Q ss_pred CCC-EEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 146 GIP-YTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 146 ~~~-~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
+++ ++|+||+.++|+......... .........+ ..+.+|+++|+|++++.+++++.
T Consensus 137 ~~~~~~I~Rp~~v~G~~~~~~~~~~---~~~~~~~~~~---~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 137 GWPQLTIARPSLLFGPREEFRLAEI---LAAPIARILP---GKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp CCSEEEEEECCSEESTTSCEEGGGG---TTCCCC-------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccccceeeCCcceeCCcccccHHHH---HHHHHhhccC---CCCcEEEHHHHHHHHHHHHcCCC
Confidence 875 999999999886432111110 1111111111 23467999999999999998764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.87 E-value=1.8e-22 Score=168.97 Aligned_cols=206 Identities=18% Similarity=0.200 Sum_probs=143.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
|||||||||||||++|++.|.++|+ ++++.++... +.+|+.|.+.+.++++ ++|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 7899999999999999999999987 4455555221 2479999999999998 5799999
Q ss_pred cccchh---------------hhhHHHHHHHHHHcCCccEEccCC---CCCCcc---ccCCCCCCcchhhHHHHHHHHHH
Q 021596 83 TVGHAL---------------LADQVKIIAAIKEAGNVTRFFPSE---FGNDVD---RAHGAVEPAKSVYYDVKARIRRA 141 (310)
Q Consensus 83 ~a~~~~---------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e~~ 141 (310)
+|+... ...+.+++++|++.+ ++.++.|+ |+.... .+..+.. +.+.|+.+|..+|++
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~-p~~~y~~~k~~~e~~ 138 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATS-PLNVYGKTKLAGEKA 138 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCC-CSSHHHHHHHHHHHH
T ss_pred ecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccC-CCchHhhhhhhhhhh
Confidence 998543 666788999999887 66555532 322211 1221333 367899999999999
Q ss_pred HHHcCCCEEEEecce-eccccccc---cCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC---CccCCceE
Q 021596 142 VEAEGIPYTYVESYC-FDGYFLPN---LLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD---PRTLNKNL 214 (310)
Q Consensus 142 l~~~~~~~~i~rp~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~~~~~ 214 (310)
++.......++|++. +++..... +.... .....+... ++...+++++.|+++++..++.. ....+++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~ 213 (298)
T d1n2sa_ 139 LQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLA---KERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLY 213 (298)
T ss_dssp HHHHCSSEEEEEECSEECSSSCCHHHHHHHHH---HHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred HHhhhcccccccccceeeccCCccchhhhhhh---cccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccc
Confidence 998777777776443 33321111 11110 122233333 35678899999999998887742 33356788
Q ss_pred EEcCCCCccCHHHHHHHHHHHhCC
Q 021596 215 YIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 215 ~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
|+++++ .++..|+++.+.+..+.
T Consensus 214 n~~~~~-~~~~~~~~~~i~~~~~~ 236 (298)
T d1n2sa_ 214 HLVAGG-TTTWHDYAALVFDEARK 236 (298)
T ss_dssp ECCCBS-CEEHHHHHHHHHHHHHH
T ss_pred cccCCC-ceecHHHHHHHHhhhhc
Confidence 887554 89999999999887643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.1e-21 Score=164.76 Aligned_cols=218 Identities=16% Similarity=0.175 Sum_probs=133.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHH-HHHH-----hcCCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHES-LVNA-----IKQVD 78 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~-~~~~-----~~~~d 78 (310)
.|||||||||||++|++.|+++|+ +|+++.+-... .+. ..+.... ..|..+.+. .... +..++
T Consensus 1 ~ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~---~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG---TKF---VNLVDLN----IADYMDKEDFLIQIMAGEEFGDVE 70 (307)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG---GGG---HHHHTSC----CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CEEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc---chh---hcccccc----hhhhccchHHHHHHhhhhcccchh
Confidence 389999999999999999999995 78887643221 111 1111111 122222222 2222 23689
Q ss_pred EEEEcccchh-------------hhhHHHHHHHHHHcCCccEEccCC---CCCCcc---ccCCCCCCcchhhHHHHHHHH
Q 021596 79 VVISTVGHAL-------------LADQVKIIAAIKEAGNVTRFFPSE---FGNDVD---RAHGAVEPAKSVYYDVKARIR 139 (310)
Q Consensus 79 ~Vi~~a~~~~-------------~~~~~~~~~aa~~~~~v~~~v~s~---~~~~~~---~~~~~~~~~~~~y~~~K~~~e 139 (310)
+|+|+|+... ...+.+++++++..+ ++.+++|+ ++.... ..+ ...++.+.|+.+|...|
T Consensus 71 ~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~-~~~~~~~~Y~~~K~~~e 148 (307)
T d1eq2a_ 71 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESR-EYEKPLNVYGYSKFLFD 148 (307)
T ss_dssp EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSG-GGCCCSSHHHHHHHHHH
T ss_pred hhhhhccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc-cccccccccccccchhh
Confidence 9999987543 667888999999988 88777632 211111 111 22334678999999999
Q ss_pred HHHHH----cCCCEEEEecceecccccc-ccCCCCC-----CC-CCCC-eEEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 140 RAVEA----EGIPYTYVESYCFDGYFLP-NLLQPGA-----AA-PPRD-KVVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 140 ~~l~~----~~~~~~i~rp~~~~~~~~~-~~~~~~~-----~~-~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
.+++. .+++++++||..++|.... ....... .. ..++ .....+++...++|+|++|++.++..++..+
T Consensus 149 ~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~ 228 (307)
T d1eq2a_ 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228 (307)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred hhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc
Confidence 98875 5899999998877764221 1000000 00 1222 2334567778899999999999999999765
Q ss_pred ccCCceEEEcCCCCccCHHHHHHHHHHHhCC
Q 021596 208 RTLNKNLYIQPPGNIYSFNDLVSLWERKIGK 238 (310)
Q Consensus 208 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 238 (310)
..+.|++.+ ++..|+.|+++.+.+..++
T Consensus 229 --~~~~~~~~~-~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 229 --VSGIFNLGT-GRAESFQAVADATLAYHKK 256 (307)
T ss_dssp --CCEEEEESC-SCCBCHHHHHHHC------
T ss_pred --ccccccccc-ccchhHHHHHHHHHHhcCC
Confidence 356788875 4589999999999877653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.75 E-value=1.2e-16 Score=128.61 Aligned_cols=190 Identities=14% Similarity=0.099 Sum_probs=133.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+++++.|+++|++|++++|+ +++.+.+..-....+.++.+|++|+++++++++ +
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 6 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999998 434432222223467889999999999888775 6
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+++|+||... ...++.++..+++.+ -.++|. ||.... ...+....|+
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~------~~~~~~~~Y~ 153 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGL------AGTVACHGYT 153 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCTTBHHHH
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccc------cccccccchh
Confidence 899999998754 222334555555655 456776 443322 1123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|+.++.+.+. .|+++..|.||.+...+....... ... .....+..++|+|++++.++.
T Consensus 154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----~~~---------~pl~R~~~p~diA~~v~fL~s 220 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----IFQ---------TALGRAAEPVEVSNLVVYLAS 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----CSC---------CSSSSCBCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----HHh---------ccccCCCCHHHHHHHHHHHhC
Confidence 999999887763 589999999998876654332221 110 011236789999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. --|+++.+-|
T Consensus 221 ~~s~~itG~~i~vDG 235 (244)
T d1nffa_ 221 DESSYSTGAEFVVDG 235 (244)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred hhhCCCcCCEEEECC
Confidence 432 2467777754
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.72 E-value=4.3e-17 Score=133.08 Aligned_cols=208 Identities=13% Similarity=0.158 Sum_probs=131.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh---hcCCcEEEEccCCCHHHHHHHhc--
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KNLGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
|-+.|+++||||++.||+++++.|+++|++|.+..|+.... ..+..+.+ ....+.++.+|++|.++++++++
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~---~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAE---IEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA 77 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHH---HHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 44568999999999999999999999999999999973211 11122222 23467889999999999988876
Q ss_pred -----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 -----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... ....+.++..+++.+ -.++|. ||.... ...|
T Consensus 78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~------~~~~ 150 (260)
T d1x1ta1 78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL------VASA 150 (260)
T ss_dssp HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCT
T ss_pred HHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccce------eccC
Confidence 6999999998754 333455666666666 467766 443322 1123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCC--CCC--eEEEecCCCceeEeeccch
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAP--PRD--KVVILGDGNPKAVYNKEDD 195 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~i~~~D 195 (310)
....|+.+|..++.+.+. .|+++..|.||++...+............ ... .............+..++|
T Consensus 151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped 230 (260)
T d1x1ta1 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHH
Confidence 467899999999887753 57889999999987665433322110000 000 0000000011124678999
Q ss_pred HHHHHHHHhcCCc--cCCceEEEcC
Q 021596 196 IATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 196 ~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+|.+++.++.+.. --|+.+.+-|
T Consensus 231 iA~~v~fL~S~~a~~itG~~i~vDG 255 (260)
T d1x1ta1 231 LGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhChhhCCCcCCEEEECc
Confidence 9999999886432 2466777753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.72 E-value=4.5e-16 Score=125.76 Aligned_cols=198 Identities=14% Similarity=0.042 Sum_probs=127.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|.++||||++.||+++++.|+++|++|.+..|+... .....++. ....+..+.+|++|+++++++++ +
T Consensus 5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~---~~~~~~~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 5 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH---HHHHHHHH-cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998431 11111122 23457889999999999888765 6
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... ...++.++..+++.+ -.++|. ||.... ...|....|+
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~------~~~~~~~~Y~ 153 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------LKIEAYTHYI 153 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------SCCSSCHHHH
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhc------ccCcccccch
Confidence 999999998754 333445556666666 467666 443221 1223467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|...+.+.+. .|+++..|.||++............ ..-...........+..++|+|.+++.++.
T Consensus 154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~~l~r~~~pedvA~~v~fL~S 227 (247)
T d2ew8a1 154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA------MFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CTTSSSCSCCCTHHHHHHHHHHTS
T ss_pred hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch------hHHHHHHHhccCCCCCCHHHHHHHHHHHhC
Confidence 999999877753 5789999999988765432221110 000011111111246678999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. --|+++.+-|
T Consensus 228 ~~s~~itG~~i~vDG 242 (247)
T d2ew8a1 228 DDASFITGQTLAVDG 242 (247)
T ss_dssp GGGTTCCSCEEEESS
T ss_pred chhcCCcCCeEEECC
Confidence 432 2467777753
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.70 E-value=2.2e-16 Score=127.89 Aligned_cols=194 Identities=15% Similarity=0.104 Sum_probs=131.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-HhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.|+++||||++.||+++++.|+++|++|++++|+ .++.... +++ ...+.++.+|++|.++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (254)
T d1hdca_ 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999999999999998 3333222 222 3458899999999999888775
Q ss_pred CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+|+... ....+.++..+++.+ -.++|. ||.... ...|....|
T Consensus 79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~------~~~~~~~~Y 151 (254)
T d1hdca_ 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGL------MGLALTSSY 151 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCTTCHHH
T ss_pred CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhc------ccccchhhH
Confidence 6999999998754 223344555555655 567776 543322 122346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEe-eccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVY-NKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~~~ 203 (310)
+.+|..++.+.+. .++++..|.||++...+............. ... +- ..+ +.++|+|.+++.+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~-~~~-----pl--~R~g~~PedvA~~v~fL 223 (254)
T d1hdca_ 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY-PNT-----PM--GRVGNEPGEIAGAVVKL 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSC-TTS-----TT--SSCB-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHH-hCC-----CC--CCCCCCHHHHHHHHHHH
Confidence 9999999887753 579999999999876544322211100000 000 00 112 3579999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. --|+.+.+-|
T Consensus 224 ~S~~a~~itG~~i~vDG 240 (254)
T d1hdca_ 224 LSDTSSYVTGAELAVDG 240 (254)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hchhhCCCCCceEEeCC
Confidence 85432 2467777754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.70 E-value=2.2e-16 Score=127.55 Aligned_cols=199 Identities=15% Similarity=0.150 Sum_probs=131.8
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
+.|+++||||++.||+++++.|+++|++|.++.|+ +++.+..+ ..+...+++|++|.++++++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~-----~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 75 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-----PEGKEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALG 75 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----TTHHHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 35899999999999999999999999999999998 33443333 3467889999999998888765
Q ss_pred CCCEEEEcccchh-------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... + ..++.++..+++.+ -.++|. ++.... ...|....|
T Consensus 76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~------~~~~~~~~Y 148 (248)
T d2d1ya1 76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGL------FAEQENAAY 148 (248)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGT------SBCTTBHHH
T ss_pred CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccc------ccccccchh
Confidence 6999999998754 2 23344555555555 457776 443222 112346889
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+.+|+.++.+.+. .|+++..|.||.+............. .................+..++|+|.++..++
T Consensus 149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~ 226 (248)
T d2d1ya1 149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP--DPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCC--CHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999887653 58999999999987654322111100 00000000011111124678999999999988
Q ss_pred cCC-c-cCCceEEEcC
Q 021596 205 DDP-R-TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~-~-~~~~~~~~~~ 218 (310)
.+. . --|+.+.+-|
T Consensus 227 S~~s~~itG~~i~vDG 242 (248)
T d2d1ya1 227 SEKASFITGAILPVDG 242 (248)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CchhcCCCCcEEEcCc
Confidence 543 2 2466777754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.7e-16 Score=126.90 Aligned_cols=197 Identities=16% Similarity=0.159 Sum_probs=130.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.|+++||||++.||+++++.|+++|++|.+++|+ .++.+.+.. +..++..+.+|++|.++++++++ ++|++
T Consensus 7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil 80 (244)
T d1pr9a_ 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence 4799999999999999999999999999999998 333322211 12578999999999999999887 68999
Q ss_pred EEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+|+... ..+ ++.++....+.++-.++|. |+.... ...|....|+.+|.
T Consensus 81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~------~~~~~~~~Y~asKa 154 (244)
T d1pr9a_ 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ------RAVTNHSVYCSTKG 154 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SCCTTBHHHHHHHH
T ss_pred EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc------ccccchhhhhhhHH
Confidence 99998754 222 3334443322221456665 443222 22334678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
.++.+.+. .++++..|.||.+........... .......-.......+..++|+|.++..++.+..
T Consensus 155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~ 228 (244)
T d1pr9a_ 155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD------PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS------HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC------hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 99887753 578999999999876543322110 0000000000111247789999999999885432
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
--|+.+.+-|
T Consensus 229 ~itG~~i~vDG 239 (244)
T d1pr9a_ 229 MTTGSTLPVEG 239 (244)
T ss_dssp TCCSCEEEEST
T ss_pred CcCCcEEEECc
Confidence 2466666643
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.70 E-value=6.2e-17 Score=131.17 Aligned_cols=197 Identities=14% Similarity=0.189 Sum_probs=130.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhh---cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFK---NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~---~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.|+++||||++.||+.+++.|+++|++|.+++|+. ++. +..+++. ...+..+.+|++|+++++++++
T Consensus 5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~-----~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL-----EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999983 232 2222221 3457889999999999888775
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCC-CCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEF-GNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~-~~~~~~~~~~~~~~ 127 (310)
++|++||+||... ...++.++..+++.+ -.++|. +|. +.. ...+.
T Consensus 80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~------~~~~~ 152 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEE------VTMPN 152 (251)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTC------CCSSS
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcc------ccCcc
Confidence 6999999998754 233344555555555 456665 443 222 12233
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|..++.+.+. .|+++..|.||++...+....... . . ........-....+..++|+|+++
T Consensus 153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~----~-~-~~~~~~~~~pl~R~~~pedvA~~v 226 (251)
T d1vl8a_ 153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD----P-E-KLDYMLKRIPLGRTGVPEDLKGVA 226 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC----H-H-HHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC----H-H-HHHHHHhcCCCCCCCCHHHHHHHH
Confidence 57899999999887753 589999999999876544322110 0 0 000000000112356789999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. --|+++.+-|
T Consensus 227 ~fL~S~~a~~itG~~i~vDG 246 (251)
T d1vl8a_ 227 VFLASEEAKYVTGQIIFVDG 246 (251)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhCCCcCcEEEeCc
Confidence 99886432 2466777753
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=6.7e-17 Score=130.31 Aligned_cols=195 Identities=14% Similarity=0.153 Sum_probs=133.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ +++.+.+..........+.+|++|.++++++++ +
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATS-----ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGE 78 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence 4789999999999999999999999999999998 444433322224567889999999999888776 6
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+|+... ....+.++..+++.+ -.++|. ||..... ..|....|+
T Consensus 79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~------~~~~~~~Y~ 151 (243)
T d1q7ba_ 79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTM------GNGGQANYA 151 (243)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH------CCTTCHHHH
T ss_pred cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcC------CCCCCHHHH
Confidence 999999998754 333445555556655 467776 5432211 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|..++.+.+. .|+++..+.||.+...+...+... .... .........+..++|+|.+++.++.
T Consensus 152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-------~~~~-~~~~~pl~R~~~pedvA~~v~fL~S 223 (243)
T d1q7ba_ 152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD-------QRAG-ILAQVPAGRLGGAQEIANAVAFLAS 223 (243)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-------HHHH-HHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh-------HHHH-HHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 999999887763 589999999998876543222110 0000 0000111246789999999999986
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. .-|+.+++-|
T Consensus 224 ~~s~~itGq~i~vdG 238 (243)
T d1q7ba_ 224 DEAAYITGETLHVNG 238 (243)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred chhcCCcCCeEEECC
Confidence 432 2567777754
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.69 E-value=3.3e-16 Score=126.13 Aligned_cols=192 Identities=15% Similarity=0.137 Sum_probs=129.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+.+++.|+++|++|.++.|+ .++.+ +..+..+++.+.+|++|+++++++++ +
T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~l~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLR--EAAEAVGAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHH--HHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHH--HHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 33332 22334578999999999999988775 6
Q ss_pred CCEEEEcccchh-------------------hhhHH----HHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------LADQV----KIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~----~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... +.+.. .++..+++.+ -..++. |+.+. ...|....|+
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~~-------~~~~~~~~Y~ 149 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVY-------LGNLGQANYA 149 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGG-------GCCTTCHHHH
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccccc-------cCCCCCcchH
Confidence 899999998754 22333 3444444444 344444 44221 1223467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|..++.+.+. .|+++..|.||.+........... ..-... .......+..++|+|.++..++.
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-------~~~~~~-~~~pl~R~~~pedia~~v~fL~S 221 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK-------VREKAI-AATPLGRAGKPLEVAYAALFLLS 221 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH-------HHHHHH-HTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHH-------HHHHHH-hcCCCCCCCCHHHHHHHHHHHhc
Confidence 999999887753 579999999998876543321110 000000 00111236678999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. --|+.+.+-|
T Consensus 222 ~~s~~itG~~i~vDG 236 (242)
T d1ulsa_ 222 DESSFITGQVLFVDG 236 (242)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred hhhCCCCCcEEEECC
Confidence 432 2466777754
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.68 E-value=2e-16 Score=126.89 Aligned_cols=187 Identities=16% Similarity=0.103 Sum_probs=129.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+++++.|+++|++|.++.|+... ...+..+++|++|+++++++++ +
T Consensus 7 gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 73 (237)
T d1uzma1 7 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGP 73 (237)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999998432 2356788999999999888765 6
Q ss_pred CCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|++||+||... ....+.++..+++.+ -.++|. ||..... ..+....|+
T Consensus 74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~------~~~~~~~Y~ 146 (237)
T d1uzma1 74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW------GIGNQANYA 146 (237)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----------CCHHHH
T ss_pred ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhcc------CCcccHHHH
Confidence 999999998754 333445566666766 567776 4433221 123467899
Q ss_pred HHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhc
Q 021596 133 DVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVD 205 (310)
Q Consensus 133 ~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 205 (310)
.+|..++.+.+. .|+++..|.||++...+...+.... ... .........+..++|+|.+++.++.
T Consensus 147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~----~~~----~~~~~pl~R~~~pedvA~~v~fL~S 218 (237)
T d1uzma1 147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERI----QQG----ALQFIPAKRVGTPAEVAGVVSFLAS 218 (237)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHH----HHH----HGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHH----HHH----HHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999887753 5789999999998765433221100 000 0000011246788999999999886
Q ss_pred CCc--cCCceEEEcC
Q 021596 206 DPR--TLNKNLYIQP 218 (310)
Q Consensus 206 ~~~--~~~~~~~~~~ 218 (310)
+.. --|+.+.+.|
T Consensus 219 ~~s~~itG~~i~vdG 233 (237)
T d1uzma1 219 EDASYISGAVIPVDG 233 (237)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred chhcCCcCCeEEECC
Confidence 432 2466777753
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.68 E-value=2.3e-16 Score=127.09 Aligned_cols=197 Identities=15% Similarity=0.163 Sum_probs=130.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ .++...+.. +..++..+.+|++|.++++++++ ++|++
T Consensus 5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDLL 78 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence 4899999999999999999999999999999998 333322211 23578999999999999999988 58999
Q ss_pred EEcccchh-------------------hhhHHHHHHHH----HHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHH
Q 021596 81 ISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKA 136 (310)
Q Consensus 81 i~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~ 136 (310)
||+||... ..+...+.+++ .+.+.-.++|. ++.... ...|....|+.+|.
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~------~~~~~~~~Y~asKa 152 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH------VTFPNLITYSSTKG 152 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SCCTTBHHHHHHHH
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc------ccCCccccccchHH
Confidence 99998654 23333333333 22221345655 443322 22344678999999
Q ss_pred HHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc-
Q 021596 137 RIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR- 208 (310)
Q Consensus 137 ~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 208 (310)
.++.+.+. .|+++..|.||++...+....... ...............+..++|+|.++..++.+..
T Consensus 153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~ 226 (242)
T d1cyda_ 153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD------PEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 226 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC------HHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 99888764 578999999998876543322110 0000000000011246788999999999885432
Q ss_pred -cCCceEEEcC
Q 021596 209 -TLNKNLYIQP 218 (310)
Q Consensus 209 -~~~~~~~~~~ 218 (310)
--|+.+.+-|
T Consensus 227 ~itG~~i~vDG 237 (242)
T d1cyda_ 227 STSGGGILVDA 237 (242)
T ss_dssp TCCSSEEEEST
T ss_pred CcCCceEEeCc
Confidence 2467777753
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.68 E-value=2.8e-16 Score=127.97 Aligned_cols=200 Identities=15% Similarity=0.165 Sum_probs=132.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||++.||+++++.|+++|++|.++.|+... ......+.++.. .+..+++|++|+++++++++
T Consensus 7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~---~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED---EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998321 112233444443 46788999999999888775
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... ...++.++..+.+.+.-.+++. |+.... ...|....
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~------~~~~~~~~ 157 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------IPWPLFVH 157 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------SCCTTCHH
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc------ccCccccc
Confidence 6899999998754 3334455555666552344654 543322 12334678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|..++.+.+. .|+++..|.||++...+....... . ... ...........+..++|+|.+++.+
T Consensus 158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~----~-~~~-~~~~~~~pl~R~~~pediA~~v~fL 231 (261)
T d1geea_ 158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD----P-EQR-ADVESMIPMGYIGEPEEIAAVAAWL 231 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS----H-HHH-HHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC----H-HHH-HHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 99999999887763 589999999999876543221100 0 000 0000000112366789999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. --|+.+.+-|
T Consensus 232 ~S~~s~~itG~~i~vDG 248 (261)
T d1geea_ 232 ASSEASYVTGITLFADG 248 (261)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhcCCcCCeEEECC
Confidence 85432 2467777754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.68 E-value=1.1e-15 Score=122.88 Aligned_cols=175 Identities=15% Similarity=0.134 Sum_probs=124.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCC-------EEEEEcCCCCCCCchh-hHhHhhhcC--CcEEEEccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHP-------TFVLVRESTLSAPSKS-QLLDHFKNL--GVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~-------V~~~~R~~~~~~~~~~-~~~~~l~~~--~~~~v~~D~~d~~~~~~~~ 74 (310)
+.|+||||++.||+++++.|.++|++ |....|+ .++. +..+++... .+..+.+|++|.+++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~ 76 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRLT 76 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence 45899999999999999999999987 8888888 3333 223344443 3678899999999988877
Q ss_pred c-------CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCC
Q 021596 75 K-------QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGA 123 (310)
Q Consensus 75 ~-------~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~ 123 (310)
+ ++|++||+|+... ...++.++..+++.+ -.++|. |+.... .
T Consensus 77 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~------~ 149 (240)
T d2bd0a1 77 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAAT------K 149 (240)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------S
T ss_pred HHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhc------C
Confidence 5 5899999998754 334455666666665 456666 443322 1
Q ss_pred CCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 124 VEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 124 ~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
..|....|+.+|..++.+.+. .|+++..+.||++...+....... ....+..++|+
T Consensus 150 ~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------------~~~~~~~Pedv 212 (240)
T d2bd0a1 150 AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------------MQALMMMPEDI 212 (240)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------------TGGGSBCHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------------hHhcCCCHHHH
Confidence 223467899999998877653 578899999998876544322111 11235678999
Q ss_pred HHHHHHHhcCCc
Q 021596 197 ATYTIKAVDDPR 208 (310)
Q Consensus 197 a~~~~~~l~~~~ 208 (310)
|++++.++.++.
T Consensus 213 A~~v~~l~s~~~ 224 (240)
T d2bd0a1 213 AAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHHcCCc
Confidence 999999997663
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=4.5e-18 Score=138.41 Aligned_cols=206 Identities=13% Similarity=0.079 Sum_probs=131.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh----cCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK----NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
-|+++||||++.||.++++.|+++|++|.+++|+. ++.+ ....+. ...+..+.+|++|.++++++++
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL-----EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999983 3322 222232 2357889999999999888775
Q ss_pred ----CCCEEEEcccchh---------------hhhHHHHHHHHHHcC--CccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 ----QVDVVISTVGHAL---------------LADQVKIIAAIKEAG--NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~---------------~~~~~~~~~aa~~~~--~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|+++|+|+... ...++.++..+++.+ +-.++|. ||.... ...|....|+.
T Consensus 78 ~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~------~~~~~~~~Y~a 151 (254)
T d2gdza1 78 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL------MPVAQQPVYCA 151 (254)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------SCCTTCHHHHH
T ss_pred HHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc------cCCCCccchHH
Confidence 6999999999865 223344444444432 1234666 443322 12234678999
Q ss_pred HHHHHHHHHH---------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHh
Q 021596 134 VKARIRRAVE---------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 134 ~K~~~e~~l~---------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+|+.++.+.+ ..|+++..|.||++...+...+...................-....+..++|+|++++.++
T Consensus 152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 9999877643 2578899999999876543322110000000000000000000123567899999999999
Q ss_pred cCCccCCceEEEcCCC
Q 021596 205 DDPRTLNKNLYIQPPG 220 (310)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (310)
.++.--|+.+.+.|..
T Consensus 232 s~~~itG~~i~VdGG~ 247 (254)
T d2gdza1 232 EDDALNGAIMKITTSK 247 (254)
T ss_dssp HCTTCSSCEEEEETTT
T ss_pred cCCCCCCCEEEECCCC
Confidence 8765567777776543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=1.5e-15 Score=123.40 Aligned_cols=196 Identities=15% Similarity=0.184 Sum_probs=120.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||..+++.|+++|++|.++.|+. ++. +..+++.. ..+..+.+|++|.++++++++
T Consensus 8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~-----~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE-----YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999983 332 22333333 357889999999988877654
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
.+|+++|+||... ...++.++..+++.+ -.++|. |+..... ..+..
T Consensus 83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~------~~~~~ 155 (259)
T d1xq1a_ 83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV------SASVG 155 (259)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------C
T ss_pred hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccc------ccccc
Confidence 3899999998754 222344555555555 457766 4432221 12335
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|..++.+.+. .|+++..|.||.+...+........ . ............+..++|+|.+++
T Consensus 156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~-----~--~~~~~~~~pl~R~~~pedvA~~v~ 228 (259)
T d1xq1a_ 156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE-----F--KKVVISRKPLGRFGEPEEVSSLVA 228 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHHH
T ss_pred ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH-----H--HHHHHhCCCCCCCcCHHHHHHHHH
Confidence 6899999999887753 5899999999988765443221110 0 000000111124678999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.+.. --|+.+.+-|
T Consensus 229 fL~S~~s~~iTG~~i~vDG 247 (259)
T d1xq1a_ 229 FLCMPAASYITGQTICVDG 247 (259)
T ss_dssp HHTSGGGTTCCSCEEECCC
T ss_pred HHhCchhcCCcCcEEEeCC
Confidence 9885432 2456666643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.67 E-value=1.8e-16 Score=128.92 Aligned_cols=204 Identities=15% Similarity=0.184 Sum_probs=131.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhhcCCcEEEEccCCCHHHHHHHhc-------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFKNLGVNFVVGDVLNHESLVNAIK------- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~~~~~~~------- 75 (310)
.|+++||||++.||+++++.|+++|++|.+..|+ .++.+. .+++ ...+..+.+|++|+++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 78 (256)
T d1k2wa_ 5 GKTALITGSARGIGRAFAEAYVREGARVAIADIN-----LEAARATAAEI-GPAACAIALDVTDQASIDRCVAELLDRWG 78 (256)
T ss_dssp TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC-----HHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999999999998 333322 2333 4568889999999999988776
Q ss_pred CCCEEEEcccchh-------------------hhhHHHHHHH----HHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 76 QVDVVISTVGHAL-------------------LADQVKIIAA----IKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------------~~~~~~~~~a----a~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||+||... +.+...+.++ ..+.++-.++|. |+.... ...|....|
T Consensus 79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~------~~~~~~~~Y 152 (256)
T d1k2wa_ 79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR------RGEALVGVY 152 (256)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCCTTCHHH
T ss_pred CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc------cccccccch
Confidence 6999999999754 3333333333 233332456776 443322 123346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCC--CCCCCC-eEEEecCCCceeEeeccchHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGA--AAPPRD-KVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
+.+|..++.+.+. .|+++..|.||++-............ ...... .............+..++|+|.+++
T Consensus 153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~ 232 (256)
T d1k2wa_ 153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAI 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 9999999887753 58999999999887654321111000 000000 0000000001124678899999999
Q ss_pred HHhcCCc--cCCceEEEcCC
Q 021596 202 KAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~~ 219 (310)
.++.+.. --|+.+.+-|.
T Consensus 233 fL~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 233 FLATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp HTTSGGGTTCCSCEEEESTT
T ss_pred HHhCchhCCccCceEEECcc
Confidence 9885432 24777777643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.66 E-value=5.2e-16 Score=127.10 Aligned_cols=201 Identities=17% Similarity=0.190 Sum_probs=130.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc-CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN-LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||++.||..+++.|+++|++|++++|+ .++. +..+++.. ..+.++.+|++|+++++++++
T Consensus 6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998 3333 23334433 347788999999999988875
Q ss_pred -CCCEEEEcccchh-------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL-------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... ...++.++..+.+.+ -.++|. |+..... ...+..
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~-----~~~~~~ 154 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFT-----AGEGVS 154 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTC-----CCTTSC
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccc-----cccccc
Confidence 6899999998542 222344445555555 345554 4322211 112224
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEec-CCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG-DGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|+.++.+.+. .|+++..|.||++...+........ ......... .......+..++|+|.++
T Consensus 155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~~~gr~~~pedvA~~v 230 (268)
T d2bgka1 155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD----SSRVEELAHQAANLKGTLLRAEDVADAV 230 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC----HHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC----HHHHHHHHHhccccCCCCcCHHHHHHHH
Confidence 5799999999887753 5899999999988776543322210 000000000 001112467899999999
Q ss_pred HHHhcCCc--cCCceEEEcCC
Q 021596 201 IKAVDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~~ 219 (310)
+.++.+.. --|+++.+-|.
T Consensus 231 ~fL~S~~s~~itGq~i~VDGG 251 (268)
T d2bgka1 231 AYLAGDESKYVSGLNLVIDGG 251 (268)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhChhhCCccCceEEECcC
Confidence 99986432 24677777543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.66 E-value=7.1e-16 Score=125.00 Aligned_cols=199 Identities=17% Similarity=0.108 Sum_probs=129.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||.++++.|+++|++|.+.+|+ +++.+.+..-......++.+|++|.++++++++ +
T Consensus 6 gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999998 333322222224567889999999998887765 6
Q ss_pred CCEEEEcccchh-------------------h----hhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 77 VDVVISTVGHAL-------------------L----ADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~----~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
+|+++|+||... + ...+.++..+++.+ .++|. ||.... ...|....|+
T Consensus 81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~------~~~~~~~~Y~ 152 (253)
T d1hxha_ 81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSW------LPIEQYAGYS 152 (253)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGT------SCCTTBHHHH
T ss_pred CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--Cceecccchhhh------cCcccccccc
Confidence 899999999754 2 22334444444433 46665 443322 1223467899
Q ss_pred HHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|+.++.+.+. +++++..|.||.+...+........ .......-...-.....+..++|+|.+++.+
T Consensus 153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL 229 (253)
T d1hxha_ 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEMVLHDPKLNRAGRAYMPERIAQLVLFL 229 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch---hhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence 999998776642 3488889999998765433221110 0000000000001112477889999999998
Q ss_pred hcCCc--cCCceEEEcC
Q 021596 204 VDDPR--TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~ 218 (310)
+.+.. --|+.+++-|
T Consensus 230 ~S~~s~~itG~~i~VDG 246 (253)
T d1hxha_ 230 ASDESSVMSGSELHADN 246 (253)
T ss_dssp HSGGGTTCCSCEEEESS
T ss_pred hChhhCCCcCcEEEECc
Confidence 86432 2466777743
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.66 E-value=1e-16 Score=130.34 Aligned_cols=201 Identities=15% Similarity=0.124 Sum_probs=130.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhh----hcCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF----KNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l----~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.|+++||||++.||+.+++.|+++|++|.++.|+ .++.+.. +.+ ....+..+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 78 (258)
T d1iy8a_ 4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 78 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998 3333221 222 12357788999999999888765
Q ss_pred ----CCCEEEEcccchh--------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCC
Q 021596 76 ----QVDVVISTVGHAL--------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~--------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~ 126 (310)
++|++||+||... +.+. +.++..+++.+ -.++|. ||..... ..|
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~------~~~ 151 (258)
T d1iy8a_ 79 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR------GIG 151 (258)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS------BCS
T ss_pred HHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhcc------CCC
Confidence 6999999998542 2233 33444445555 456666 4433221 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCC-Ce-EEEecCCCceeEeeccchHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPR-DK-VVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~~D~a 197 (310)
....|+.+|..+..+.+. .|+++..|.||.+...+......... ... .. ............+..++|+|
T Consensus 152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~pl~R~~~p~dvA 229 (258)
T d1iy8a_ 152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD--PENPRKAAEEFIQVNPSKRYGEAPEIA 229 (258)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHC--TTCHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcC--cccHHHHHHHHHhcCCCCCCcCHHHHH
Confidence 468999999999877653 58999999999987654322111000 000 00 00000011112467889999
Q ss_pred HHHHHHhcCC--ccCCceEEEcC
Q 021596 198 TYTIKAVDDP--RTLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~--~~~~~~~~~~~ 218 (310)
.+++.++.+. .--|+.+.+-|
T Consensus 230 ~~v~fL~S~~s~~itG~~i~VDG 252 (258)
T d1iy8a_ 230 AVVAFLLSDDASYVNATVVPIDG 252 (258)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCchhcCCcCceEEcCc
Confidence 9999988643 22466777754
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=4.5e-16 Score=126.30 Aligned_cols=197 Identities=14% Similarity=0.125 Sum_probs=131.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ .++. +..++++. ..+..+++|++|+++++++++
T Consensus 11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3799999999999999999999999999999998 3332 23344443 357889999999999887765
Q ss_pred --CCCEEEEcccchh----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 --QVDVVISTVGHAL----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 --~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+++|+||... ...++.++...++.+ -.++|. |+.... ...|....
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~------~~~~~~~~ 158 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE------NKNINMTS 158 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------CCCTTCHH
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchh------cccccccc
Confidence 6999999998754 222344555555555 445555 443322 12234678
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|..++.+.+. .|+++..|.||++........... . .............+..++|+|.+++.+
T Consensus 159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------e-~~~~~~~~~pl~R~g~pedvA~~v~fL 231 (255)
T d1fmca_ 159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP------E-IEQKMLQHTPIRRLGQPQDIANAALFL 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH------H-HHHHHHHTCSSCSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH------H-HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 578999999998866433221110 0 000000001112466789999999998
Q ss_pred hcCCc--cCCceEEEcCC
Q 021596 204 VDDPR--TLNKNLYIQPP 219 (310)
Q Consensus 204 l~~~~--~~~~~~~~~~~ 219 (310)
+.+.. --|+.+.+-|.
T Consensus 232 ~S~~s~~itG~~i~vDGG 249 (255)
T d1fmca_ 232 CSPAASWVSGQILTVSGG 249 (255)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCchhcCCcCCEEEECcC
Confidence 85432 25677777643
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.66 E-value=8.4e-16 Score=124.48 Aligned_cols=197 Identities=15% Similarity=0.162 Sum_probs=128.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhH-hHhhh-cCCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQL-LDHFK-NLGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~l~-~~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ .++.+. .+.+. ...+.++.+|++|+++++++++
T Consensus 6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999999999999998 333322 23332 2458899999999998887776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+|+... +.++..+ +..+++.+.-.++|. |+.... ...|....
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~------~~~~~~~~ 154 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF------VGDPSLGA 154 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT------SCCTTCHH
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee------ccCCCchh
Confidence 6899999998754 3333334 444444441235555 443322 11234678
Q ss_pred hHHHHHHHHHHHH---------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 131 YYDVKARIRRAVE---------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 131 y~~~K~~~e~~l~---------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
|+.+|..++.+.+ ..|+++..|.||++...+........ .............+..++|+|.+++
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~-------~~~~~~~~~pl~R~~~pedvA~~v~ 227 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE-------EAMSQRTKTPMGHIGEPNDIAYICV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH-------HHHTSTTTCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH-------HHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 9999999876543 24788999999998765432221100 0000000001124678999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.+.. --|+.+.+-|
T Consensus 228 fL~S~~s~~itG~~i~vDG 246 (251)
T d1zk4a1 228 YLASNESKFATGSEFVVDG 246 (251)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhCCCcCcEEEECc
Confidence 9885432 2466677753
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.65 E-value=5.8e-16 Score=125.41 Aligned_cols=195 Identities=14% Similarity=0.145 Sum_probs=130.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|.++||||++.||+++++.|+++|++|.++.|+ .++. +..++++. ..+..+.+|++|++++.++++
T Consensus 10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 84 (251)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 3333 22334433 347889999999999888776
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ....+.++..+++.+ -.++|. ||..... ..|...
T Consensus 85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~------~~~~~~ 157 (251)
T d2c07a1 85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT------GNVGQA 157 (251)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCTTCH
T ss_pred cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC------CCCCCH
Confidence 6999999998754 222344555556665 567776 4432211 123467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|..++.+.+. .|+++..|.||++...+....... .............+..++|+|.+++.
T Consensus 158 ~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~--------~~~~~~~~~pl~R~~~pedvA~~v~f 229 (251)
T d2c07a1 158 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ--------IKKNIISNIPAGRMGTPEEVANLACF 229 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH--------HHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 899999999887763 589999999998876543322110 00000000111236789999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. --|+++.+-|
T Consensus 230 L~S~~s~~itG~~i~vDG 247 (251)
T d2c07a1 230 LSSDKSGYINGRVFVIDG 247 (251)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhCCCcCcEEEECC
Confidence 886432 2466777753
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.64 E-value=8.8e-16 Score=124.75 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=129.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
|.++||||++.||+++++.|+++|++|.+..|+ +++.+ ..+++.. ..+..+.+|++|.+++.++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 76 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 456999999999999999999999999999998 33332 2333433 347888999999999888765
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|++||+||... +.+...+ +....+.++-.+++. |+.... ...|....
T Consensus 77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------~~~~~~~~ 150 (255)
T d1gega_ 77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH------VGNPELAV 150 (255)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCCTTBHH
T ss_pred CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc------ccCccccc
Confidence 6999999998654 3333344 443344443455665 443322 22345688
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCC---CCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGA---AAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
|+.+|...+.+.+. .|+++..|.||.+.......+..... ...................+..++|+|.++
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v 230 (255)
T d1gega_ 151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999887753 58999999999886543221110000 000000000000001112367789999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. --|+.+.+-|
T Consensus 231 ~fL~S~~a~~itG~~i~vDG 250 (255)
T d1gega_ 231 SYLASPDSDYMTGQSLLIDG 250 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHhCchhCCccCcEEEecC
Confidence 99886432 2466666653
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=3.3e-15 Score=123.78 Aligned_cols=199 Identities=13% Similarity=0.112 Sum_probs=128.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhh-------cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFK-------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~-------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.|+++||||++.||.++++.|+++|++|+++.|+ .++.+ ..+++. ...+..+.+|++|+++++++++
T Consensus 12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~-----~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 5899999999999999999999999999999998 33322 223332 2357889999999999888765
Q ss_pred -------CCCEEEEcccchh-------------------hhhHHHHHHHH----HHcCCccEEccCCCCCCccccCCCCC
Q 021596 76 -------QVDVVISTVGHAL-------------------LADQVKIIAAI----KEAGNVTRFFPSEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 -------~~d~Vi~~a~~~~-------------------~~~~~~~~~aa----~~~~~v~~~v~s~~~~~~~~~~~~~~ 125 (310)
++|++||+|+... +.++..+.+++ .+.+ -.++|.++.+.. ...
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~------~~~ 159 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTK------AGF 159 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCT------TCC
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-cccccccccccc------ccc
Confidence 6899999998644 33333444443 3444 345555222211 123
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|..++.+.+. .|+++..|.||++....................... .....+..++|+|.
T Consensus 160 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----~plgR~g~pedvA~ 235 (297)
T d1yxma1 160 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----IPAKRIGVPEEVSS 235 (297)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----STTSSCBCTHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc----CCCCCCcCHHHHHH
Confidence 3467899999999887764 578999999998865432211110000000000000 01124667899999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.+.. --|+++.+-|
T Consensus 236 ~v~fL~Sd~s~~iTG~~i~VDG 257 (297)
T d1yxma1 236 VVCFLLSPAASFITGQSVDVDG 257 (297)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCcCCcEEEeCc
Confidence 9999986432 2467777754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.63 E-value=2.4e-15 Score=122.23 Aligned_cols=200 Identities=15% Similarity=0.195 Sum_probs=127.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+++++.|+++|++|.+++|+ +.+. +..+.+.. ..+.++.+|++|.++++++++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999998 3332 23334443 346778999999998877664
Q ss_pred ---CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
..|+++|+++... ... ++.++....+.+ ..++|+ |+.... ...|..
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~------~~~~~~ 153 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGF------SALPSV 153 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGT------SCCTTC
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccc------cccccc
Confidence 3799999998765 222 333444455555 567766 443322 112346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
..|+.+|..++.+.+. .|+++..|.||++...+........ ..... ............+..++|+|.++
T Consensus 154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~plgR~~~pediA~~v 230 (258)
T d1ae1a_ 154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSALI 230 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh---hhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 7899999999888764 5789999999998765443322210 00000 00000000112377899999999
Q ss_pred HHHhcCC-c-cCCceEEEcC
Q 021596 201 IKAVDDP-R-TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~-~-~~~~~~~~~~ 218 (310)
+.++.+. . --|+.+.+-|
T Consensus 231 ~fL~S~~s~~itG~~i~vDG 250 (258)
T d1ae1a_ 231 AFLCFPAASYITGQIIWADG 250 (258)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhChhhCCCcCcEEEeCC
Confidence 9999543 2 2466677653
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.63 E-value=7.8e-16 Score=125.25 Aligned_cols=200 Identities=15% Similarity=0.175 Sum_probs=129.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcC--CcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNL--GVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+++++.|+++|++|++.+|+ .++. +..+++... .+..+.+|++|+++++++++
T Consensus 8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 3332 233444443 46788999999998887654
Q ss_pred ---CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
.+|+++|+||... +.+ ++.++..+++.+ -.++|. ||.... ...|..
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~------~~~~~~ 155 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGA------LAVPYE 155 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGT------SCCTTC
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccc------cccccc
Confidence 3899999998654 222 334444455555 456766 443222 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|..++.+.+. .++++..|.||.+...+........ .......-.........+..++|+|.+++
T Consensus 156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~pl~R~g~pedvA~~v~ 232 (259)
T d2ae2a_ 156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENLNKLIDRCALRRMGEPKELAAMVA 232 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhch---hhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 7899999999887763 5789999999988765432221110 00000000000011123677899999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.+.. --|+.+.+-|
T Consensus 233 fL~S~~s~~itG~~i~VDG 251 (259)
T d2ae2a_ 233 FLCFPAASYVTGQIIYVDG 251 (259)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhCCCcCcEEEECC
Confidence 9886432 2466666653
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=6.6e-16 Score=124.83 Aligned_cols=198 Identities=14% Similarity=0.176 Sum_probs=129.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+++++.|+++|++|.+++|+ .++.+.+.. +..++..+.+|++|.++++++++ +
T Consensus 6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQ-ELPGAVFILCDVTQEDDVKTLVSETIRRFGR 79 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH-hcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 434332222 13568899999999999888775 6
Q ss_pred CCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhh
Q 021596 77 VDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 77 ~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y 131 (310)
+|++||+||... ...++.++..+++.+ .++|. ||.... ...|....|
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~------~~~~~~~~Y 151 (250)
T d1ydea1 80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGA------IGQAQAVPY 151 (250)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHH------HCCTTCHHH
T ss_pred CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCccccccccc------ccccCcchh
Confidence 899999998543 222344444555543 35555 443221 112346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCC-CeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPR-DKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
+.+|..++.+.+. .++++..|.||++...+...+.... ... ....-.........+..++|+|.+++.+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL 228 (250)
T d1ydea1 152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 228 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC---CCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999887753 5899999999998765433222110 000 0000000001112467899999999998
Q ss_pred hcCCcc-CCceEEEcC
Q 021596 204 VDDPRT-LNKNLYIQP 218 (310)
Q Consensus 204 l~~~~~-~~~~~~~~~ 218 (310)
+.+... -|+++.+-|
T Consensus 229 ~Sda~~itG~~i~vDG 244 (250)
T d1ydea1 229 ASEANFCTGIELLVTG 244 (250)
T ss_dssp HHHCTTCCSCEEEEST
T ss_pred hCccCCCcCCeEEECC
Confidence 854332 466677754
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.63 E-value=3.5e-15 Score=119.56 Aligned_cols=191 Identities=16% Similarity=0.218 Sum_probs=129.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCC-HHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLN-HESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~~~~~~~~~d~Vi~ 82 (310)
.|+++||||++.||+++++.|+++|++|.+++|+ . +.++..+.+++.+|+.+ .+.+.+.+.++|+++|
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~-----~------~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVn 72 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----E------ELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVL 72 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----H------HHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----H------HHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEe
Confidence 4899999999999999999999999999999998 2 23345678889999975 4566666678999999
Q ss_pred cccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHH
Q 021596 83 TVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARI 138 (310)
Q Consensus 83 ~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~ 138 (310)
+||... ...++.++..+++.+ -.++|. ++.... ...+....|+.+|..+
T Consensus 73 nAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~------~~~~~~~~Y~asKaal 145 (234)
T d1o5ia_ 73 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVI------SPIENLYTSNSARMAL 145 (234)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------SCCTTBHHHHHHHHHH
T ss_pred cccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccc------ccccccccchhHHHHH
Confidence 998643 223445555566665 456665 443222 1223467898999998
Q ss_pred HHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--c
Q 021596 139 RRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--T 209 (310)
Q Consensus 139 e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~ 209 (310)
+.+.+. .|+++..|.||++........... ..............+..++|+|.++..++.+.. -
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~-------~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~i 218 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE-------EKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYL 218 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH-------HHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCC
Confidence 877653 588999999998876543322110 000000011111246789999999999886432 2
Q ss_pred CCceEEEcCC
Q 021596 210 LNKNLYIQPP 219 (310)
Q Consensus 210 ~~~~~~~~~~ 219 (310)
-|+++.+-|.
T Consensus 219 tG~~i~vDGG 228 (234)
T d1o5ia_ 219 TGQTIVVDGG 228 (234)
T ss_dssp CSCEEEESTT
T ss_pred cCcEEEECcc
Confidence 4677777543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.63 E-value=1.5e-15 Score=123.71 Aligned_cols=203 Identities=13% Similarity=0.153 Sum_probs=128.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh---hcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||.++++.|+++|++|+++.|+.... .+..+++ ....+..+.+|++|++++.++++
T Consensus 9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~----~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (260)
T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA----VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 84 (260)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH----HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999985432 2222332 23468889999999999888775
Q ss_pred --CCCEEEEcccchh-------------------hhhH----HHHHHHHHHcCCccEEcc-CCCCC-CccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL-------------------LADQ----VKIIAAIKEAGNVTRFFP-SEFGN-DVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~----~~~~~aa~~~~~v~~~v~-s~~~~-~~~~~~~~~~~~~ 128 (310)
++|++||+|+... ..+. +.++..+.+.+.-..++. ++... ..........+..
T Consensus 85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~ 164 (260)
T d1h5qa_ 85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ 164 (260)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccc
Confidence 6899999998653 2223 334444433332344443 33211 1111000112345
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTI 201 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 201 (310)
..|+.+|...+.+.+. .|+++..|.||++............ .. . ....-....+..++|+|.+++
T Consensus 165 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~----~~-~---~~~~~pl~R~g~pedvA~~v~ 236 (260)
T d1h5qa_ 165 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKI----RD-H---QASNIPLNRFAQPEEMTGQAI 236 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHH----HH-H---HHHTCTTSSCBCGGGGHHHHH
T ss_pred cchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHH----HH-H---HHhcCCCCCCcCHHHHHHHHH
Confidence 7899999999887653 5899999999988765433221100 00 0 000001123677999999999
Q ss_pred HHhcCCc--cCCceEEEcC
Q 021596 202 KAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 202 ~~l~~~~--~~~~~~~~~~ 218 (310)
.++.+.. --|+.+.+-|
T Consensus 237 fL~S~~s~~itG~~i~VDG 255 (260)
T d1h5qa_ 237 LLLSDHATYMTGGEYFIDG 255 (260)
T ss_dssp HHHSGGGTTCCSCEEEECT
T ss_pred HHhcchhCCCcCceEEECC
Confidence 9885432 2466777754
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.63 E-value=7e-16 Score=124.32 Aligned_cols=195 Identities=15% Similarity=0.102 Sum_probs=129.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
+.|+||||++.||+++++.|+++|++|.+..++. +.+.+ ..+.++. ..+..+.+|++|.++++++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 6799999999999999999999999998876652 22222 2233322 357789999999999888765
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchh
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSV 130 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~ 130 (310)
++|+++|+|+... ...++.++..+++.+ -.++|. ||..... ..|....
T Consensus 78 g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~------~~~~~~~ 150 (244)
T d1edoa_ 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI------GNIGQAN 150 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH------CCTTCHH
T ss_pred CCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcC------CCCCCHH
Confidence 6899999998754 333455666666665 467776 5533211 1234578
Q ss_pred hHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 131 YYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 131 y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
|+.+|..++.+.+. .|+++..|.||++...+...+... .............+..++|+|.++..+
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~pl~R~~~p~dvA~~v~fL 222 (244)
T d1edoa_ 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGED--------MEKKILGTIPLGRTGQPENVAGLVEFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH--------HHHHHHTSCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999887753 589999999998876543222110 000000001112467889999999988
Q ss_pred hcCCc---cCCceEEEcC
Q 021596 204 VDDPR---TLNKNLYIQP 218 (310)
Q Consensus 204 l~~~~---~~~~~~~~~~ 218 (310)
+..+. --|+.+.+-|
T Consensus 223 a~S~~a~~itG~~i~vdG 240 (244)
T d1edoa_ 223 ALSPAASYITGQAFTIDG 240 (244)
T ss_dssp HHCSGGGGCCSCEEEEST
T ss_pred HCCchhcCCcCCeEEeCC
Confidence 64332 2466666643
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.62 E-value=3.3e-15 Score=121.99 Aligned_cols=200 Identities=17% Similarity=0.178 Sum_probs=126.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc-----CCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN-----LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.|.++||||++.||+++++.|+++|++|.++.|+ .++. +..+++.. .++..+.+|++|.++++++++
T Consensus 5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 3333 22233322 247899999999999888775
Q ss_pred -----CCCEEEEcccchh---------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCC
Q 021596 76 -----QVDVVISTVGHAL---------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~---------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|++||+||... ...++.++..+++.+ -..++. |+.+..
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~------ 152 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGL------ 152 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSS------
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccc------
Confidence 6999999998531 222344455555544 344444 443322
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEE----EecCCCceeEee
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVV----ILGDGNPKAVYN 191 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i 191 (310)
...|....|+.+|..++.+.+. .|+++..|.||++...+........ ....... ..........+.
T Consensus 153 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~Pl~R~g 229 (264)
T d1spxa_ 153 HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE---ETSKKFYSTMATMKECVPAGVMG 229 (264)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----------------HHHHHHHHHHCTTSSCB
T ss_pred ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcH---HHHHHHHHHHHHHHhcCCCCCCc
Confidence 1233467899999999877753 5899999999988765433221110 0000000 000000112367
Q ss_pred ccchHHHHHHHHhcCC--c-cCCceEEEcC
Q 021596 192 KEDDIATYTIKAVDDP--R-TLNKNLYIQP 218 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~~--~-~~~~~~~~~~ 218 (310)
.++|+|++++.++.++ . --|+.+.+-|
T Consensus 230 ~pedvA~~v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 230 QPQDIAEVIAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence 7899999999988643 2 2566777754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=4.9e-15 Score=119.09 Aligned_cols=174 Identities=13% Similarity=0.128 Sum_probs=124.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc--CCcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN--LGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
-+.++||||++.||+.+++.|+++|++|++++|+ .++.+ ..+++.. ..+..+.+|++|.+++.++++
T Consensus 7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 33332 2233333 357889999999999888775
Q ss_pred --CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|++||+++... ...++.++..+++.+ -.++|. |+..... ..|...
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~------~~~~~~ 154 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHV------SVPFLL 154 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CC------CHHHHH
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcC------CCCCcH
Confidence 5999999999765 333445566666666 567776 5443321 223467
Q ss_pred hhHHHHHHHHHHHHH----------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 130 VYYDVKARIRRAVEA----------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~----------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
.|+.+|+....+.+. .|+.+..+.||++...+.... . .....++.++|+|+.
T Consensus 155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-----------~-------~~~~~~~~pe~va~~ 216 (244)
T d1yb1a_ 155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------S-------TSLGPTLEPEEVVNR 216 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------H-------HHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-----------C-------ccccCCCCHHHHHHH
Confidence 899999998777643 368899999998866543211 0 011234568899999
Q ss_pred HHHHhcCC
Q 021596 200 TIKAVDDP 207 (310)
Q Consensus 200 ~~~~l~~~ 207 (310)
+...+..+
T Consensus 217 i~~~~~~~ 224 (244)
T d1yb1a_ 217 LMHGILTE 224 (244)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 88877654
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.61 E-value=1.9e-15 Score=121.55 Aligned_cols=195 Identities=13% Similarity=0.070 Sum_probs=128.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||..+++.|+++|++|++..|+ .++......-....+.++++|++|+++++++++ +
T Consensus 5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~ 79 (241)
T d2a4ka1 5 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR 79 (241)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999998 333322211113457889999999999988766 5
Q ss_pred CCEEEEcccchh-------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhHHHH
Q 021596 77 VDVVISTVGHAL-------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+|++||+|+... ......+.+++...- +-+.++. |+.+.. ..|....|+.+|
T Consensus 80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-------~~~~~~~Y~~sK 152 (241)
T d2a4ka1 80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-------GAFGLAHYAAGK 152 (241)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-------CHHHHHHHHHCS
T ss_pred ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-------cccCccccchhh
Confidence 999999998754 333344444444331 1122333 443321 123467899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCC-
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDP- 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~- 207 (310)
...+.+.+. .|+++..+.||.+-..+...+... .............+..++|+|+++..++.+.
T Consensus 153 ~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--------~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 153 LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW--------AWEQEVGASPLGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH--------HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh--------HHHHHHhCCCCCCCcCHHHHHHHHHHHhcchh
Confidence 999988764 479999999998866543221110 0000000011124678999999999999643
Q ss_pred c-cCCceEEEcC
Q 021596 208 R-TLNKNLYIQP 218 (310)
Q Consensus 208 ~-~~~~~~~~~~ 218 (310)
. --|+++.+-|
T Consensus 225 ~~itG~~i~vDG 236 (241)
T d2a4ka1 225 AYITGQALYVDG 236 (241)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCcCceEEeCC
Confidence 2 2466777754
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.61 E-value=2.7e-15 Score=124.71 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=123.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhh---hcCCcEEEEccCCCHHHHHHHhc-----
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHF---KNLGVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~----- 75 (310)
|+++||||+|.||+++++.|+++|++|++++|+. .+. +..+++ ....+..+.+|+.|.+++.++++
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~-----~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM-----DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH-----HHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 7899999999999999999999999999999983 222 222233 23457889999999999887665
Q ss_pred --CCCEEEEcccchh-------------------hhhHHHH----HHHHHHcCCccEEcc-CCCCCCccccCCCCCCcch
Q 021596 76 --QVDVVISTVGHAL-------------------LADQVKI----IAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 --~~d~Vi~~a~~~~-------------------~~~~~~~----~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~ 129 (310)
++|+++|+++... ......+ +...........++. ++.... ...+...
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~------~~~~~~~ 174 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE------TGSGFVV 174 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH------HCCTTCH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh------hcccccc
Confidence 6999999998754 1111111 112222221233333 332211 1223457
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHH
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIK 202 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 202 (310)
.|+.+|...+.+.+. .|+++..|.||++........... ................+..++|+|.++..
T Consensus 175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~pl~R~~~pediA~~v~f 249 (294)
T d1w6ua_ 175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-----TGTFEKEMIGRIPCGRLGTVEELANLAAF 249 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-----TSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC-----cHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence 899999999888763 579999999999876543322211 00000000000111246788999999999
Q ss_pred HhcCCc--cCCceEEEcC
Q 021596 203 AVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 203 ~l~~~~--~~~~~~~~~~ 218 (310)
++.+.. --|+++.+-|
T Consensus 250 L~sd~s~~itG~~i~vDG 267 (294)
T d1w6ua_ 250 LCSDYASWINGAVIKFDG 267 (294)
T ss_dssp HTSGGGTTCCSCEEEEST
T ss_pred HhCchhcCCCCcEEEECC
Confidence 996532 3567777754
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.60 E-value=1.7e-14 Score=116.81 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=109.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
|+ +++|+||||++.||.++++.|+++|+ .|++..|+ .++.+.+.+....++.++.+|++|.++++++++
T Consensus 1 M~-~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~-----~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~ 74 (250)
T d1yo6a1 1 MS-PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD-----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVG 74 (250)
T ss_dssp CC-CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS-----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred Cc-CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHH
Confidence 55 58999999999999999999999995 57788888 444444444445678999999999998877654
Q ss_pred ------CCCEEEEcccchh--------------------hhhHH----HHHHHHHHcC--C--------ccEEcc-CC-C
Q 021596 76 ------QVDVVISTVGHAL--------------------LADQV----KIIAAIKEAG--N--------VTRFFP-SE-F 113 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~--------------------~~~~~----~~~~aa~~~~--~--------v~~~v~-s~-~ 113 (310)
++|++|++||... ..++. .++..+++.+ . ..+++. ++ .
T Consensus 75 ~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~ 154 (250)
T d1yo6a1 75 EIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL 154 (250)
T ss_dssp HHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred HHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence 3899999999643 22233 3333333321 0 012222 11 1
Q ss_pred CCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCc
Q 021596 114 GNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNP 186 (310)
Q Consensus 114 ~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (310)
+............+...|+.+|+....+.+. .|+++..+.||++-..+...
T Consensus 155 ~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~---------------------- 212 (250)
T d1yo6a1 155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------------------- 212 (250)
T ss_dssp GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------------
T ss_pred ccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC----------------------
Confidence 1111100001112345699999998777643 57899999999876542110
Q ss_pred eeEeeccchHHHHHHHHhcCC
Q 021596 187 KAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 187 ~~~~i~~~D~a~~~~~~l~~~ 207 (310)
...+++++.+..++..+...
T Consensus 213 -~~~~~~e~~a~~~~~~~~~~ 232 (250)
T d1yo6a1 213 -NAALTVEQSTAELISSFNKL 232 (250)
T ss_dssp -------HHHHHHHHHHHTTC
T ss_pred -CCCCCHHHHHHHHHHHHhcC
Confidence 02345678888888888653
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.60 E-value=1.8e-15 Score=123.34 Aligned_cols=205 Identities=16% Similarity=0.117 Sum_probs=128.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~------ 75 (310)
-|+++||||++.||.++++.|+++|++|++..|+..+. .....+.+... .+..+.+|++|.++++++++
T Consensus 6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~---~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA---AEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHH---HHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999887763211 12223444433 57889999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEccCCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFPSEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|++||++|... +.....+++++.. .+ --.++.|+.+.. ...|....|
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g-~~iii~s~~~~~------~~~~~~~~Y 155 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG-RIILTSSIAAVM------TGIPNHALY 155 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE-EEEEECCGGGTC------CSCCSCHHH
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC-cccccccccccc------cCCCCchhH
Confidence 6899999999764 3333444444443 23 112333443322 122346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCC----CCCCCCCe-EEEecCCCceeEeeccchHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPG----AAAPPRDK-VVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
+.+|...+.+.+. .|+++..|.||++...+........ ........ ............+..++|+|++
T Consensus 156 ~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~ 235 (259)
T d1ja9a_ 156 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRA 235 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 9999999877753 5899999999998764332111100 00000000 0000001111247789999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
+..++.+.. --|+.+.+-|
T Consensus 236 v~fL~S~~a~~itG~~i~vDG 256 (259)
T d1ja9a_ 236 VSALCQEESEWINGQVIKLTG 256 (259)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCchhcCCcCceEEeCC
Confidence 999886542 2466666643
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.60 E-value=1.6e-14 Score=118.60 Aligned_cols=202 Identities=16% Similarity=0.091 Sum_probs=127.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ +++...+..-....+..+.+|++|.++++++++ +
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (276)
T d1bdba_ 5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS-----AERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGK 79 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999998 444432222224568899999999998888765 6
Q ss_pred CCEEEEcccchh----------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 77 VDVVISTVGHAL----------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 77 ~d~Vi~~a~~~~----------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
+|+++|+||... ...++.++..+++.+ -..++. |+.+.. ..|.
T Consensus 80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~-------~~~~ 151 (276)
T d1bdba_ 80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY-------PNGG 151 (276)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS-------TTSS
T ss_pred cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc-------CCCC
Confidence 899999998532 222334455555554 233333 433321 1234
Q ss_pred chhhHHHHHHHHHHHHH------cCCCEEEEecceeccccccccCCCCCCC-CCCCe-EEEecCCCceeEeeccchHHHH
Q 021596 128 KSVYYDVKARIRRAVEA------EGIPYTYVESYCFDGYFLPNLLQPGAAA-PPRDK-VVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~------~~~~~~i~rp~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
...|+.+|+.++.+.+. .++++..|.||.+..++........... ..... .......-....+..++|+|.+
T Consensus 152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~ 231 (276)
T d1bdba_ 152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGA 231 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 67899999999877753 2478888899988765443221110000 00000 0000011111236678999999
Q ss_pred HHHHhcCC--c-cCCceEEEcC
Q 021596 200 TIKAVDDP--R-TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~--~-~~~~~~~~~~ 218 (310)
++.++..+ . --|+.+++-|
T Consensus 232 v~fL~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 232 YVFFATRGDAAPATGALLNYDG 253 (276)
T ss_dssp HHHHHCHHHHTTCSSCEEEESS
T ss_pred HHHHcCCcccCCeeCcEEEECc
Confidence 98887532 2 3467777754
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.59 E-value=5.3e-15 Score=121.37 Aligned_cols=205 Identities=17% Similarity=0.098 Sum_probs=130.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
.|+++||||++.||+++++.|+++|++|++++|+..+. .....+.+.. ..+.++.+|++|++++.+.++
T Consensus 18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~---~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES---AEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHH---HHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 37999999999999999999999999999998873211 1122233333 347888999999998888766
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH----cCCccEEccCCCCCCccccCCCCCCcchhh
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE----AGNVTRFFPSEFGNDVDRAHGAVEPAKSVY 131 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~----~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y 131 (310)
++|+++|+++... ..+...+.+++.. .+ -..++.|+.+.. ...+....|
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g-~~i~i~s~~~~~------~~~~~~~~Y 167 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGG-RLILMGSITGQA------KAVPKHAVY 167 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTC-EEEEECCGGGTC------SSCSSCHHH
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccc-cccccccccccc------ccccchhhH
Confidence 6899999998764 3334444444443 33 122333444332 122346789
Q ss_pred HHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-----EEecCCCceeEeeccchHHHH
Q 021596 132 YDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-----VILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 132 ~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~D~a~~ 199 (310)
+.+|+..+.+.+. .|+++..|.||++-..+...+............. ...........+..++|+|.+
T Consensus 168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~ 247 (272)
T d1g0oa_ 168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 9999999887753 5899999999999765433222111000000000 000000111247889999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
++.++.+.. --|..+.+-|
T Consensus 248 v~fL~s~~s~~itG~~i~vDG 268 (272)
T d1g0oa_ 248 VCFLASNDGGWVTGKVIGIDG 268 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCchhcCccCceEeECC
Confidence 999986432 2466666654
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.59 E-value=1.6e-14 Score=117.64 Aligned_cols=185 Identities=18% Similarity=0.226 Sum_probs=125.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D~~d~~~~~~~~~----- 75 (310)
..+|+||||+|.||..+++.|+++|++ |+++.|+..+. .......+++...+ +.++.+|++|.+++.++++
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH-HHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 368999999999999999999999985 77888874433 22333444554444 7888999999999998876
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHHH
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDV 134 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~ 134 (310)
+.|.|+|+++... +.+..++.++++..+ ..++|. ||.... -..+....|+.+
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~------~g~~~~~~YaAa 160 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASA------FGAPGLGGYAPG 160 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHH------TCCTTCTTTHHH
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhc------cCCcccHHHHHH
Confidence 4789999998754 455566777776665 667765 442221 112345689999
Q ss_pred HHHHHHHHH---HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc
Q 021596 135 KARIRRAVE---AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR 208 (310)
Q Consensus 135 K~~~e~~l~---~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 208 (310)
|...+.+.+ ..|++++.|.||.+.+..+..-.. . .... ......+.++++++++..++..+.
T Consensus 161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~-------~---~~~~--~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 161 NAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-------A---DRFR--RHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHhCCCCEEECCCCcccCCccccchH-------H---HHHH--hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 999887664 478999999999876542211000 0 0000 112356788999999999987664
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.59 E-value=6e-15 Score=119.92 Aligned_cols=202 Identities=16% Similarity=0.149 Sum_probs=129.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK------ 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~------ 75 (310)
|.++||||++.||+++++.|+++|++|.+..|+ +++. +..+++.. ..+..+++|++|+++++++++
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 567999999999999999999999999999998 3333 23344433 347889999999999888776
Q ss_pred -CCCEEEEcccchh-------------------hhhHHHHHHHHHH------cCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 -QVDVVISTVGHAL-------------------LADQVKIIAAIKE------AGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-------------------~~~~~~~~~aa~~------~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||+||... +.+...+.+++.. .+ -.++|. ++.... ...|..
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~------~~~~~~ 150 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGK------QGVVHA 150 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGT------SCCTTC
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Ccccccccccccc------cccccc
Confidence 5899999998754 4455556665532 33 345665 333222 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCC--CCCCCC-eEEEecCCCceeEeeccchHHH
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGA--AAPPRD-KVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
..|+.+|..+..+.+. .|+++..|.||++...+...+..... ...... ....+...-....+..++|+|.
T Consensus 151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~ 230 (257)
T d2rhca1 151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 230 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 7899999999888764 46888999999886543221100000 000000 0000000011124678999999
Q ss_pred HHHHHhcCCc--cCCceEEEcC
Q 021596 199 YTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~~--~~~~~~~~~~ 218 (310)
+++.++.+.. --|+.+.+-|
T Consensus 231 ~v~fL~S~~s~~itG~~i~vDG 252 (257)
T d2rhca1 231 MVAYLIGPGAAAVTAQALNVCG 252 (257)
T ss_dssp HHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCCcCceEEECc
Confidence 9999885432 2467777753
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=2.5e-15 Score=122.02 Aligned_cols=186 Identities=19% Similarity=0.199 Sum_probs=121.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhcC----CcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKNL----GVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~~----~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.|.++||||++.||.++++.|+++|++|++..|+ +.+.+ ..+++... .+..+.+|++|++++.++++
T Consensus 10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 10 DRLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 43332 23444432 46788999999998888765
Q ss_pred ----CCCEEEEcccchh-------------------hhh----HHHHHHHHHHcCC-ccEEcc-CC-CCCCccccCCCCC
Q 021596 76 ----QVDVVISTVGHAL-------------------LAD----QVKIIAAIKEAGN-VTRFFP-SE-FGNDVDRAHGAVE 125 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-------------------~~~----~~~~~~aa~~~~~-v~~~v~-s~-~~~~~~~~~~~~~ 125 (310)
++|++||+|+... ..+ ++.++...++.+. -.++|. |+ .+... .+.
T Consensus 85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----~p~ 159 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-----LPL 159 (257)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-----CSC
T ss_pred HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC-----CCC
Confidence 6999999998754 222 3334444444431 245665 44 33211 112
Q ss_pred CcchhhHHHHHHHHHHHH---------HcCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchH
Q 021596 126 PAKSVYYDVKARIRRAVE---------AEGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDI 196 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~---------~~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 196 (310)
+....|+.+|..++.+.+ ..++++..+.||.+-..+........ ... .........+..++|+
T Consensus 160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~-----~~~---~~~~~~~~r~~~pedv 231 (257)
T d1xg5a_ 160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-----PEK---AAATYEQMKCLKPEDV 231 (257)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-----HHH---HHHHHC---CBCHHHH
T ss_pred cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh-----HHH---HHhcCCCCCCcCHHHH
Confidence 235679999999887653 24688888999887665443322110 000 0000112357889999
Q ss_pred HHHHHHHhcCC
Q 021596 197 ATYTIKAVDDP 207 (310)
Q Consensus 197 a~~~~~~l~~~ 207 (310)
|+++..++.++
T Consensus 232 A~~v~fL~s~~ 242 (257)
T d1xg5a_ 232 AEAVIYVLSTP 242 (257)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHhCCh
Confidence 99999998765
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=3.4e-14 Score=117.76 Aligned_cols=219 Identities=11% Similarity=0.055 Sum_probs=140.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC----Cchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA----PSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
.|+++||||++.||+.+++.|+++|++|++.+|+..... ..+. +..+++.. ....+.+|+.|.++++++++
T Consensus 7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-cccccccccchHHHHHHHHHHHH
Confidence 478999999999999999999999999999988754211 1111 12223322 34456678877766555443
Q ss_pred ----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|++||+||... +..++.++..+++.+ -.++|. ||.... ...+.
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~------~~~~~ 158 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGI------YGNFG 158 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------HCCTT
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhc------CCCCC
Confidence 6999999999754 333455666666666 567776 543221 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|..+..+.+. .|+++..|.||.+.......+ ++....+..++|+|.++
T Consensus 159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------------------~~~~~~~~~PedvA~~v 220 (302)
T d1gz6a_ 159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------------------PEDLVEALKPEYVAPLV 220 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------------------CHHHHHHSCGGGTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------------------cHhhHhcCCHHHHHHHH
Confidence 67899999999887753 578899999986543211111 01122456689999999
Q ss_pred HHHhcCCc-cCCceEEEcC------------------CCCccCHHHHHHHHHHHhCCCceeeecCHH
Q 021596 201 IKAVDDPR-TLNKNLYIQP------------------PGNIYSFNDLVSLWERKIGKTLEREYVSEE 248 (310)
Q Consensus 201 ~~~l~~~~-~~~~~~~~~~------------------~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 248 (310)
+.++.+.. ..|+++.+.| .+.+.|..++++.+.++...+..-.+.+..
T Consensus 221 ~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~~~~p~~~~ 287 (302)
T d1gz6a_ 221 LWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNASKPKSIQ 287 (302)
T ss_dssp HHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTCBCCCCHH
T ss_pred HHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcccCcCCCCHH
Confidence 99885332 2234333321 134678889999998888765443344433
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.58 E-value=7.2e-15 Score=119.05 Aligned_cols=197 Identities=14% Similarity=0.103 Sum_probs=125.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh----hcCCcEEEEccCC-CHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF----KNLGVNFVVGDVL-NHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~-d~~~~~~~~~--- 75 (310)
.|+|+||||++.||..+++.|+++|.+|+++.|+..+ ...+.++ ...++.++.+|+. +.++++++++
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN-----PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC-----HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc-----HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence 4899999999999999999999999999999998543 2222222 2235788999997 5556665554
Q ss_pred ----CCCEEEEcccchh-----------hhhHH----HHHHHHHHc--CCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 76 ----QVDVVISTVGHAL-----------LADQV----KIIAAIKEA--GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-----------~~~~~----~~~~aa~~~--~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++|++|++||... ..++. .++..+.+. +...++|. |+.... ...+....|+.
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~------~~~~~~~~Y~a 153 (254)
T d1sbya1 80 DQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------NAIHQVPVYSA 153 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT------SCCTTSHHHHH
T ss_pred HHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc------cCCCCCHHHHH
Confidence 6999999999765 33333 344444332 11345665 443222 11234678999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcC
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDD 206 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 206 (310)
+|+.+..+.+. .++++..|.||++..++...+.... .........+ .......++++|++++.+++.
T Consensus 154 sKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~e~va~~~~~~~~~ 227 (254)
T d1sbya1 154 SKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELL----LSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHH----TTSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch--hHHHHHHhcc----ccCCCCCHHHHHHHHHHhhhC
Confidence 99998776653 5899999999999776443221110 0011100000 112345688999999888865
Q ss_pred CccCCceEEEcC
Q 021596 207 PRTLNKNLYIQP 218 (310)
Q Consensus 207 ~~~~~~~~~~~~ 218 (310)
.. .|.++.+-|
T Consensus 228 ~~-tG~vi~vdg 238 (254)
T d1sbya1 228 NK-NGAIWKLDL 238 (254)
T ss_dssp CC-TTCEEEEET
T ss_pred CC-CCCEEEECC
Confidence 43 456666543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1e-14 Score=117.53 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=129.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc---CCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK---QVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---~~d~V 80 (310)
.|+++||||++.||+++++.|+++|++|++++|+ +.+.+ +..+..+++...+|+.+.+.++...+ ++|++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~-----~~~l~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l 78 (245)
T d2ag5a1 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQ--ELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (245)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHG--GGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHH--HHHhccCCceeeeeccccccccccccccccceeE
Confidence 4789999999999999999999999999999998 33332 22234678899999998877776665 79999
Q ss_pred EEcccchh-------------------hhh----HHHHHHHHHHcCCccEEcc-CC-CCCCccccCCCCCCcchhhHHHH
Q 021596 81 ISTVGHAL-------------------LAD----QVKIIAAIKEAGNVTRFFP-SE-FGNDVDRAHGAVEPAKSVYYDVK 135 (310)
Q Consensus 81 i~~a~~~~-------------------~~~----~~~~~~aa~~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~~~y~~~K 135 (310)
+|+++... ..+ ++.++....+.+ -.++|. ++ .+.. ...+....|+.+|
T Consensus 79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~------~~~~~~~~Y~~sK 151 (245)
T d2ag5a1 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV------KGVVNRCVYSTTK 151 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT------BCCTTBHHHHHHH
T ss_pred EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-Cceeeeeechhhcc------CCccchhHHHHHH
Confidence 99998754 222 333444444544 456555 43 3422 1223467899999
Q ss_pred HHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEeeccchHHHHHHHHhcCC
Q 021596 136 ARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVYNKEDDIATYTIKAVDDP 207 (310)
Q Consensus 136 ~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 207 (310)
...+.+.+. .|+++..|.||.+...+........ ..... ............+..++|+|+++..++.+.
T Consensus 152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~ 228 (245)
T d2ag5a1 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR---GNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS---SSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh---hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence 999988764 5899999999988654332211110 00000 000000011124678899999999999653
Q ss_pred c--cCCceEEEcC
Q 021596 208 R--TLNKNLYIQP 218 (310)
Q Consensus 208 ~--~~~~~~~~~~ 218 (310)
. --|+.+.+-|
T Consensus 229 s~~iTG~~i~VDG 241 (245)
T d2ag5a1 229 SAYVTGNPVIIDG 241 (245)
T ss_dssp GTTCCSCEEEECT
T ss_pred hCCCcCceEEeCC
Confidence 2 2466677653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.57 E-value=3.9e-14 Score=114.49 Aligned_cols=148 Identities=16% Similarity=0.192 Sum_probs=100.6
Q ss_pred CceEEEEccCcchhHHHHHHHHh---CCCCEEEEEcCCCCCCCchhhHhHhh--hcCCcEEEEccCCCHHHHHHHhc---
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK---AGHPTFVLVRESTLSAPSKSQLLDHF--KNLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
||+|+||||++.||..+++.|++ +|++|++..|+.++. +.++.+ ...++.++.+|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~ 76 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-----KELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 76 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC-----HHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH-----HHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhH
Confidence 67999999999999999999984 689999999995432 222322 23578999999999988776543
Q ss_pred ------CCCEEEEcccchh--------------------hhh----HHHHHHHHHHc-----------CCccEEcc--CC
Q 021596 76 ------QVDVVISTVGHAL--------------------LAD----QVKIIAAIKEA-----------GNVTRFFP--SE 112 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~--------------------~~~----~~~~~~aa~~~-----------~~v~~~v~--s~ 112 (310)
++|+++++|+... ..+ ++.++..+++. + -.++|. |.
T Consensus 77 ~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~ 155 (248)
T d1snya_ 77 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSI 155 (248)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCG
T ss_pred HHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-cccccccccc
Confidence 4899999998643 222 22333333332 1 234444 33
Q ss_pred CCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceecccc
Q 021596 113 FGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYF 161 (310)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~ 161 (310)
.+.... ...+....|+.+|.....+.+. .++++..+.||++-..+
T Consensus 156 ~g~~~~----~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 156 LGSIQG----NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp GGCSTT----CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred ccccCC----CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 332211 2223456899999998776643 57999999999887654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.4e-14 Score=119.49 Aligned_cols=205 Identities=16% Similarity=0.176 Sum_probs=123.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC--CchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA--PSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
++.|+||||++.||+++++.|.++|.+|+.+.+...+.. ....+..+.+. ...+..+.+|++|.+++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 356789999999999999999999987665544322110 11111222222 2357889999999999998876
Q ss_pred -CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CC-CCCCccccCCCCCCcch
Q 021596 76 -QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SE-FGNDVDRAHGAVEPAKS 129 (310)
Q Consensus 76 -~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~-~~~~~~~~~~~~~~~~~ 129 (310)
.+|+++++++... +..++.++..+++.+ -.++|. || .+.. ..|...
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~-------~~~~~~ 153 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM-------GLPFND 153 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS-------CCTTCH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcC-------CCCCch
Confidence 5899999998654 333444555566666 467666 43 3321 233467
Q ss_pred hhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEec---------CCCceeEeecc
Q 021596 130 VYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG---------DGNPKAVYNKE 193 (310)
Q Consensus 130 ~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~ 193 (310)
.|+.+|+.++.+.+. .|+++..+.||++...+..................... ..-.......+
T Consensus 154 ~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 233 (285)
T d1jtva_ 154 VYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNP 233 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCH
Confidence 899999999877653 58999999999987665433221100000000000000 00000125578
Q ss_pred chHHHHHHHHhcCCccCCceEEEcC
Q 021596 194 DDIATYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~~~~ 218 (310)
+|+|++++.+++.++. +..|+.+
T Consensus 234 eeVA~~v~~~~~~~~p--~~ry~~g 256 (285)
T d1jtva_ 234 EEVAEVFLTALRAPKP--TLRYFTT 256 (285)
T ss_dssp HHHHHHHHHHHHCSSC--CSEEESC
T ss_pred HHHHHHHHHHHhCCCC--CeEEecH
Confidence 9999999999987642 3456654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.54 E-value=3.3e-15 Score=121.12 Aligned_cols=196 Identities=12% Similarity=0.050 Sum_probs=122.4
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------CCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------QVD 78 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~~d 78 (310)
+.+||||++.||+.+++.|+++|++|.+..|+. ++.+.++.. ......+|+.|.++++++++ ++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~-----~~~~~~~~~---~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF-----KQKDELEAF---AETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG-----GSHHHHHHH---HHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHhh---hCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999983 333222222 22334567766655555443 699
Q ss_pred EEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcchhhHH
Q 021596 79 VVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYD 133 (310)
Q Consensus 79 ~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~ 133 (310)
++||+|+... ...++.++..+++.+ -.++|. |+.... ...|....|+.
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~------~~~~~~~~Y~a 146 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPF------GPWKELSTYTS 146 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTT------SCCTTCHHHHH
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccc------ccccccccccc
Confidence 9999987532 222344555555555 456766 443322 12234578999
Q ss_pred HHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe--EEEecCCCceeEeeccchHHHHHHHHh
Q 021596 134 VKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK--VVILGDGNPKAVYNKEDDIATYTIKAV 204 (310)
Q Consensus 134 ~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~D~a~~~~~~l 204 (310)
+|..++.+.+. .|+++..|.||++.......+..... ..... ............+..++|+|.+++.++
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~ 224 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP--WKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA 224 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH--HTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccc--ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99999887753 58999999999987654332211000 00000 000000000123678999999999998
Q ss_pred cCCc--cCCceEEEcC
Q 021596 205 DDPR--TLNKNLYIQP 218 (310)
Q Consensus 205 ~~~~--~~~~~~~~~~ 218 (310)
.+.. --|+.+.+-|
T Consensus 225 S~~s~~iTG~~i~vdG 240 (252)
T d1zmta1 225 SGSCDYLTGQVFWLAG 240 (252)
T ss_dssp TTSCGGGTTCEEEEST
T ss_pred CchhcCCcCCeEEECC
Confidence 6542 2467777754
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.53 E-value=5.5e-14 Score=114.26 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=129.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcC--CcEEEEccCCCHHHHHHHhc-----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNL--GVNFVVGDVLNHESLVNAIK----- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~----- 75 (310)
.|+++||||++.||+++++.|+++|++|.+++|+ .++. +..+.+... .+..+.+|++|.++++++++
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 3333 223344433 47889999999998888775
Q ss_pred --CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 --QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 --~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
++|++||++|... ...++.++..+.+.+ -.++|. ||.... ...|..
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~------~~~~~~ 152 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGV------KGPPNM 152 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH------SCCTTB
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhc------cCCcch
Confidence 6999999998642 222344445555555 456766 442211 122346
Q ss_pred hhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCC-----CCCCCCCCCe---EEEecCCCceeEeecc
Q 021596 129 SVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQ-----PGAAAPPRDK---VVILGDGNPKAVYNKE 193 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~i~~ 193 (310)
..|+.+|..++.+.+. .|+++..|.||.+...+...... .......... ...+...-....+..+
T Consensus 153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 232 (260)
T d1zema1 153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence 7899999999887753 57899999999987653211000 0000000000 0000000011236778
Q ss_pred chHHHHHHHHhcCCc--cCCceEEEc
Q 021596 194 DDIATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
+|+|.+++.++.+.. --|+.+.+-
T Consensus 233 edvA~~v~fL~S~~s~~itG~~i~VD 258 (260)
T d1zema1 233 NEIPGVVAFLLGDDSSFMTGVNLPIA 258 (260)
T ss_dssp GGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHhCchhcCccCCeEEeC
Confidence 999999999886432 245666664
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=3.1e-14 Score=115.70 Aligned_cols=198 Identities=13% Similarity=0.108 Sum_probs=119.9
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-h-cCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-K-NLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~-~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.|+++||||+| .||.++++.|+++|++|.+..|+. ...+..+.. . ......+++|+.|.++++++++
T Consensus 8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcH-----HHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 47899999998 799999999999999998888873 222222222 1 2357889999999999888765
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPA 127 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~ 127 (310)
++|+++|+++... ......+.+++...- +-.++|. |+.... ...|.
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~------~~~~~ 156 (256)
T d1ulua_ 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------KVVPK 156 (256)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------SBCTT
T ss_pred hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc------CCCCC
Confidence 6899999998632 112223333332210 0123444 332221 11234
Q ss_pred chhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHH
Q 021596 128 KSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYT 200 (310)
Q Consensus 128 ~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 200 (310)
...|+.+|..++.+.+. .|+++..+.||.+........... ...............+..++|+|.++
T Consensus 157 ~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~------~~~~~~~~~~~pl~R~~~pedvA~~v 230 (256)
T d1ulua_ 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF------TKMYDRVAQTAPLRRNITQEEVGNLG 230 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C------HHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh------HHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 67899999999888763 589999999998765432211100 00000000000112367789999999
Q ss_pred HHHhcCCc--cCCceEEEcC
Q 021596 201 IKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 201 ~~~l~~~~--~~~~~~~~~~ 218 (310)
+.++.+.. --|+.+.+-|
T Consensus 231 ~fL~S~~s~~itG~~i~VDG 250 (256)
T d1ulua_ 231 LFLLSPLASGITGEVVYVDA 250 (256)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhCCccCCeEEECc
Confidence 99886432 2466777753
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.51 E-value=2.3e-13 Score=111.34 Aligned_cols=201 Identities=17% Similarity=0.175 Sum_probs=128.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-----CCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-----LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.|+++||||++.||+++++.|+++|++|.++.|+ .++.+ ..+++.. ..+..+.+|++|+++++++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 79 (272)
T d1xkqa_ 5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 79 (272)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence 4799999999999999999999999999999998 33332 2233332 247889999999999888775
Q ss_pred -----CCCEEEEcccchh-----------------------hhh----HHHHHHHHHHcCCccEEcc-CCCCCCccccCC
Q 021596 76 -----QVDVVISTVGHAL-----------------------LAD----QVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHG 122 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-----------------------~~~----~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~ 122 (310)
++|++||+||... +.+ ++.++..+++.+ -..++. |+.+..
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~------ 152 (272)
T d1xkqa_ 80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP------ 152 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS------
T ss_pred HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccchhccc------
Confidence 6899999998642 122 233444444443 344444 433322
Q ss_pred CCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCe----EEEecCCCceeEee
Q 021596 123 AVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK----VVILGDGNPKAVYN 191 (310)
Q Consensus 123 ~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i 191 (310)
...|....|+.+|..+..+.+. .|+++..|.||++...+........ ..... .......-....+.
T Consensus 153 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~PlgR~g 229 (272)
T d1xkqa_ 153 QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPD---QASQKFYNFMASHKECIPIGAAG 229 (272)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCH---HHHHHHHHHHHHCTTTCTTSSCB
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCch---HHHHHHHHHHHHHhcCCCCCCCc
Confidence 1233467899999999877753 5899999999988765433221100 00000 00000000112367
Q ss_pred ccchHHHHHHHHhcCC--c-cCCceEEEcCC
Q 021596 192 KEDDIATYTIKAVDDP--R-TLNKNLYIQPP 219 (310)
Q Consensus 192 ~~~D~a~~~~~~l~~~--~-~~~~~~~~~~~ 219 (310)
.++|+|.+++.++.++ . --|+++.+-|.
T Consensus 230 ~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 230 KPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 7899999999988543 2 24677777543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=3.1e-13 Score=109.19 Aligned_cols=193 Identities=15% Similarity=0.130 Sum_probs=120.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-------C
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-------Q 76 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-------~ 76 (310)
.|.++||||++.||.++++.|+++|++|++++|+.+.. ....+++ .........|+.+.+.++.... .
T Consensus 5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG----EAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH----HHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHHh-CCCccccccccccccccccccccccccccc
Confidence 47899999999999999999999999999999984321 1222333 4567888899998876665443 5
Q ss_pred CCEEEEcccchh-------------------------hhhHHHHHHHHHHc----------CCccEEcc-CCCCCCcccc
Q 021596 77 VDVVISTVGHAL-------------------------LADQVKIIAAIKEA----------GNVTRFFP-SEFGNDVDRA 120 (310)
Q Consensus 77 ~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~----------~~v~~~v~-s~~~~~~~~~ 120 (310)
.|.++++++... ..++.++.+++... + -.++|+ |+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~---- 154 (248)
T d2o23a1 80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAF---- 154 (248)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHH----
T ss_pred ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC-ceEEEEecchhhc----
Confidence 788887654322 33344555555332 1 235665 443321
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeecc
Q 021596 121 HGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKE 193 (310)
Q Consensus 121 ~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 193 (310)
...|....|+.+|...+.+.+. .|+++..|.||++...+...+.... ... ....-.....+..+
T Consensus 155 --~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~----~~~---~~~~~pl~~R~g~p 225 (248)
T d2o23a1 155 --EGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV----CNF---LASQVPFPSRLGDP 225 (248)
T ss_dssp --HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CH---HHHTCSSSCSCBCH
T ss_pred --cCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH----HHH---HHhcCCCCCCCcCH
Confidence 1123467899999999888764 5789999999988765543322110 000 00000001236688
Q ss_pred chHHHHHHHHhcCCccCCceEE
Q 021596 194 DDIATYTIKAVDDPRTLNKNLY 215 (310)
Q Consensus 194 ~D~a~~~~~~l~~~~~~~~~~~ 215 (310)
+|+|.+++.+++.+---|++++
T Consensus 226 eevA~~v~fL~s~~~itGq~I~ 247 (248)
T d2o23a1 226 AEYAHLVQAIIENPFLNGEVIR 247 (248)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEE
T ss_pred HHHHHHHHHHHhCCCCCceEeE
Confidence 9999999988875433455554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.51 E-value=2.1e-13 Score=111.58 Aligned_cols=201 Identities=15% Similarity=0.188 Sum_probs=129.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhh-HhHhhhc-----CCcEEEEccCCCHHHHHHHhc--
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQ-LLDHFKN-----LGVNFVVGDVLNHESLVNAIK-- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~-- 75 (310)
.|+++||||++.||+++++.|+++|++|.+..|+ .++.+ ..+++.. ..+..+.+|++|+++++++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (274)
T d1xhla_ 4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 78 (274)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence 4799999999999999999999999999999998 33332 2233332 246889999999998888775
Q ss_pred -----CCCEEEEcccchh-------------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCC
Q 021596 76 -----QVDVVISTVGHAL-------------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 76 -----~~d~Vi~~a~~~~-------------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
++|+++|+||... ...++.++..+++.+ -.+++. |+.... ..
T Consensus 79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~------~~ 151 (274)
T d1xhla_ 79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP------QA 151 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS------SC
T ss_pred HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcc------cc
Confidence 6899999998532 222334444455554 455555 433322 12
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeE-EEe---cCCCceeEeecc
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKV-VIL---GDGNPKAVYNKE 193 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~i~~ 193 (310)
.+....|+.+|..++.+.+. .|+++..|.||++...+........ ...... ... ...-....+..+
T Consensus 152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~~iPlgR~g~p 228 (274)
T d1xhla_ 152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPE---TASDKLYSFIGSRKECIPVGHCGKP 228 (274)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCH---HHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccc---hhhHHHHHHHHHHHcCCCCCCCcCH
Confidence 23467899999999887753 5899999999998765432221100 000000 000 000011235678
Q ss_pred chHHHHHHHHhcCC--c-cCCceEEEcCC
Q 021596 194 DDIATYTIKAVDDP--R-TLNKNLYIQPP 219 (310)
Q Consensus 194 ~D~a~~~~~~l~~~--~-~~~~~~~~~~~ 219 (310)
+|+|.+++.++..+ . --|+.+.+-|.
T Consensus 229 ediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 229 EEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 99999999888532 2 35677777543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.45 E-value=2.5e-13 Score=111.49 Aligned_cols=199 Identities=12% Similarity=0.035 Sum_probs=123.9
Q ss_pred CCceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc---
Q 021596 3 SKSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 3 ~~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
+.|++|||||+| .||.++++.|+++|++|+++.|+.. ..+.++++. .....+...|+.+.+++.++++
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-----~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-----LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK 78 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHH
Confidence 468999999887 6999999999999999999999832 222233332 2456788999999988777764
Q ss_pred ----CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc--CCCCCCccccCCCCCC
Q 021596 76 ----QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP--SEFGNDVDRAHGAVEP 126 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~--s~~~~~~~~~~~~~~~ 126 (310)
++|+++++++... ...............+-...|. |+.+... ..+
T Consensus 79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------~~~ 152 (274)
T d2pd4a1 79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------YMA 152 (274)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------BCT
T ss_pred HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc------ccc
Confidence 6899999998654 0011122222222111222232 4444321 123
Q ss_pred cchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 127 AKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 127 ~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
....|+.+|...+.+.+. .|+++..+.||.+........... ...............+..++|+|.+
T Consensus 153 ~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedIA~~ 226 (274)
T d2pd4a1 153 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF------RMILKWNEINAPLRKNVSLEEVGNA 226 (274)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch------HHHHHHHhhhhhccCCcCHHHHHHH
Confidence 357899999999887754 579999999998876543322110 0000000000111256789999999
Q ss_pred HHHHhcCCc--cCCceEEEcC
Q 021596 200 TIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 200 ~~~~l~~~~--~~~~~~~~~~ 218 (310)
+..++.+.. -.|+++.+-|
T Consensus 227 v~fL~S~~s~~itG~~i~vDG 247 (274)
T d2pd4a1 227 GMYLLSSLSSGVSGEVHFVDA 247 (274)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhChhhCCCcCceEEECC
Confidence 999886532 2466666653
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.42 E-value=5.9e-13 Score=106.58 Aligned_cols=180 Identities=10% Similarity=0.001 Sum_probs=114.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-------hc-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-------IK- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-------~~- 75 (310)
.|+|+||||+|.||+++++.|+++|++|.++.|+.... ......+..|..+.+..... +.
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999999999874332 12233445555555444332 22
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHc-CCccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEA-GNVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~-~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+||... +....++.+++... .+-.++|. |+.... ...|....|+
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------~~~~~~~~Y~ 143 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL------DGTPGMIGYG 143 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------SCCTTBHHHH
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc------CCccCCcccH
Confidence 4799999998432 22333344444332 11234555 443322 1223467899
Q ss_pred HHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|..++.+.+. .++++..+.||++...+....... ...-.|+.++++|+.+..+
T Consensus 144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~~pe~va~~~~~l 207 (236)
T d1dhra_ 144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------------ADFSSWTPLEFLVETFHDW 207 (236)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------------SCGGGSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------------chhhcCCCHHHHHHHHHHH
Confidence 999999988864 267888899998876543221110 0112467789999999998
Q ss_pred hcCCc--cCCceEEEc
Q 021596 204 VDDPR--TLNKNLYIQ 217 (310)
Q Consensus 204 l~~~~--~~~~~~~~~ 217 (310)
+.... ..|..+.+.
T Consensus 208 ~s~~~~~i~G~~i~v~ 223 (236)
T d1dhra_ 208 ITGNKRPNSGSLIQVV 223 (236)
T ss_dssp HTTTTCCCTTCEEEEE
T ss_pred hCCCccCCCCCeEEEE
Confidence 86542 245555543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=5.5e-13 Score=108.38 Aligned_cols=199 Identities=15% Similarity=0.096 Sum_probs=124.2
Q ss_pred CCceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-h-cCCcEEEEccCCCHHHHHHHhc---
Q 021596 3 SKSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-K-NLGVNFVVGDVLNHESLVNAIK--- 75 (310)
Q Consensus 3 ~~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~-~~~~~~v~~D~~d~~~~~~~~~--- 75 (310)
+.|+++||||+| .||+++++.|+++|++|++..|+.. .....+++ . ......+..|+.+..+....+.
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-----LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG 78 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-----THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence 358999999998 7999999999999999999999832 22222222 2 2357788899999887777664
Q ss_pred ----CCCEEEEcccchh------------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCC
Q 021596 76 ----QVDVVISTVGHAL------------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVE 125 (310)
Q Consensus 76 ----~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~ 125 (310)
..|+++|+++... ......+.+++...- +-+.++. |+.+... ..
T Consensus 79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~------~~ 152 (258)
T d1qsga_ 79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------AI 152 (258)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------BC
T ss_pred hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc------CC
Confidence 5799999987643 222223333333321 0122443 5554321 22
Q ss_pred CcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHH
Q 021596 126 PAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIAT 198 (310)
Q Consensus 126 ~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 198 (310)
|....|+.+|...+.+.+. .|+++..|+||.+...+....... ...............+..++|+|.
T Consensus 153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------~~~~~~~~~~~pl~R~~~peeia~ 226 (258)
T d1qsga_ 153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGN 226 (258)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh------hhHHHHHHhCCCCCCCcCHHHHHH
Confidence 3457899999999988764 578999999999876543322110 000000000000113678999999
Q ss_pred HHHHHhcCC-c-cCCceEEEcC
Q 021596 199 YTIKAVDDP-R-TLNKNLYIQP 218 (310)
Q Consensus 199 ~~~~~l~~~-~-~~~~~~~~~~ 218 (310)
++..++.+. . -.|+++.+-|
T Consensus 227 ~v~fL~s~~s~~itG~~i~vDG 248 (258)
T d1qsga_ 227 SAAFLCSDLSAGISGEVVHVDG 248 (258)
T ss_dssp HHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCccCceEEECc
Confidence 999988643 2 3466666654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.41 E-value=4.7e-13 Score=107.15 Aligned_cols=179 Identities=15% Similarity=0.075 Sum_probs=111.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHH-------Hhc-
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVN-------AIK- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~-------~~~- 75 (310)
..||+||||+|.||.++++.|+++|++|++++|+.... ......+.+|..+.+.... .++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG 69 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence 36899999999999999999999999999999985432 1123344566665444332 222
Q ss_pred -CCCEEEEcccchh--------------------hhhHHHHHHHHHHcC-CccEEcc-CCCCCCccccCCCCCCcchhhH
Q 021596 76 -QVDVVISTVGHAL--------------------LADQVKIIAAIKEAG-NVTRFFP-SEFGNDVDRAHGAVEPAKSVYY 132 (310)
Q Consensus 76 -~~d~Vi~~a~~~~--------------------~~~~~~~~~aa~~~~-~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~ 132 (310)
++|++||+||... +.++..+.+++...- +-.++|+ |+.... ...|....|+
T Consensus 70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~------~~~~~~~~Y~ 143 (235)
T d1ooea_ 70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM------GPTPSMIGYG 143 (235)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------SCCTTBHHHH
T ss_pred CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc------CCcccccchH
Confidence 4899999998532 223334444444321 0134555 443321 1234468999
Q ss_pred HHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHH
Q 021596 133 DVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKA 203 (310)
Q Consensus 133 ~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 203 (310)
.+|+.++.+.+. .++++..+.||++...+....... .....++.++|+++.++..
T Consensus 144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------------~~~~~~~~~~~va~~~~~~ 207 (235)
T d1ooea_ 144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------------ADHSSWTPLSFISEHLLKW 207 (235)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------------CCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------------CccccCCCHHHHHHHHHHH
Confidence 999999988764 245667778988766543322110 0112467889999998876
Q ss_pred hcCCc---cCCceEEE
Q 021596 204 VDDPR---TLNKNLYI 216 (310)
Q Consensus 204 l~~~~---~~~~~~~~ 216 (310)
+..+. ..|..+.+
T Consensus 208 l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 208 TTETSSRPSSGALLKI 223 (235)
T ss_dssp HHCGGGCCCTTCEEEE
T ss_pred hcCccccCCCceEEEE
Confidence 65542 23455555
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.37 E-value=1.2e-13 Score=112.32 Aligned_cols=189 Identities=10% Similarity=0.014 Sum_probs=119.0
Q ss_pred CceEEEEccCcchhHHHHHHHHh---CCCCEEEEEcCCCCCCCchhhH-hHhhhc--C--CcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK---AGHPTFVLVRESTLSAPSKSQL-LDHFKN--L--GVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~~-~~~l~~--~--~~~~v~~D~~d~~~~~~~~~ 75 (310)
.+.++||||++.||..+++.|.+ +|++|+++.|+ .++.+. .+++.. + .+..+.+|++|+++++++++
T Consensus 6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 46789999999999999999975 78999999998 333322 233321 2 46789999999999887763
Q ss_pred -----------CCCEEEEcccchh----------------------hhhHHHHHHHHHHc----C-CccEEcc-CCCCCC
Q 021596 76 -----------QVDVVISTVGHAL----------------------LADQVKIIAAIKEA----G-NVTRFFP-SEFGND 116 (310)
Q Consensus 76 -----------~~d~Vi~~a~~~~----------------------~~~~~~~~~aa~~~----~-~v~~~v~-s~~~~~ 116 (310)
+.|+++++++... +.+...+.+++... + .-.++|. ||....
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 3568899887532 33445555555432 1 1235555 443222
Q ss_pred ccccCCCCCCcchhhHHHHHHHHHHHHH-----cCCCEEEEecceeccccccccCCCCCCCCCCCe-EEEecCCCceeEe
Q 021596 117 VDRAHGAVEPAKSVYYDVKARIRRAVEA-----EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDK-VVILGDGNPKAVY 190 (310)
Q Consensus 117 ~~~~~~~~~~~~~~y~~~K~~~e~~l~~-----~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 190 (310)
...|....|+.+|+.++.+.+. .++++..+.||.+...+........ .... ...+........+
T Consensus 161 ------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~~~~r~ 230 (259)
T d1oaaa_ 161 ------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS----KDPELRSKLQKLKSDGAL 230 (259)
T ss_dssp ------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC----SCHHHHHHHHHHHHTTCS
T ss_pred ------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcC----CCHHHHHHHHhcCCCCCC
Confidence 1233468899999999877753 5788899999988765432211110 0000 0000000001135
Q ss_pred eccchHHHHHHHHhcCC
Q 021596 191 NKEDDIATYTIKAVDDP 207 (310)
Q Consensus 191 i~~~D~a~~~~~~l~~~ 207 (310)
..++|+|++++.++.+.
T Consensus 231 ~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 231 VDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp BCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhhhc
Confidence 67899999999988644
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=2.5e-12 Score=104.93 Aligned_cols=174 Identities=14% Similarity=0.113 Sum_probs=113.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhh---hcCCcEEEEccCCCHHHHHHHhc----
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF---KNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
.|+++||||++.||.++++.|+++|++|+++.|+ .++.+.+ +++ ....+..+.+|..+.+.....++
T Consensus 14 GK~alITGassGIG~aiA~~la~~G~~Vil~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (269)
T d1xu9a_ 14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 88 (269)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998 3333222 221 22346778899998877766544
Q ss_pred ---CCCEEEEcccchh-----------------------hhhHHHHHHHHHHcCCccEEcc-CCCCCCccccCCCCCCcc
Q 021596 76 ---QVDVVISTVGHAL-----------------------LADQVKIIAAIKEAGNVTRFFP-SEFGNDVDRAHGAVEPAK 128 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~~~v~~~v~-s~~~~~~~~~~~~~~~~~ 128 (310)
..|+++++++... ...++.++..+++.+ .++|. |+.... ...|..
T Consensus 89 ~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~------~~~p~~ 160 (269)
T d1xu9a_ 89 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGK------VAYPMV 160 (269)
T ss_dssp HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGT------SCCTTC
T ss_pred HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhc------CCCCCc
Confidence 6899999988654 233344555554433 34444 332221 223456
Q ss_pred hhhHHHHHHHHHHHHH---------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHH
Q 021596 129 SVYYDVKARIRRAVEA---------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATY 199 (310)
Q Consensus 129 ~~y~~~K~~~e~~l~~---------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 199 (310)
..|+.+|+.++.+.+. .++++..+.||.+-..+....... .......+.+++|+.
T Consensus 161 ~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~----------------~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 161 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----------------IVHMQAAPKEECALE 224 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----------------GGGGGCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC----------------CccccCCCHHHHHHH
Confidence 8999999998876642 357788899998876533211110 011134556788888
Q ss_pred HHHHhcC
Q 021596 200 TIKAVDD 206 (310)
Q Consensus 200 ~~~~l~~ 206 (310)
+...+..
T Consensus 225 i~~~~~~ 231 (269)
T d1xu9a_ 225 IIKGGAL 231 (269)
T ss_dssp HHHHHHT
T ss_pred HHHHhhc
Confidence 8776654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.34 E-value=2.3e-12 Score=103.45 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=115.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc------CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK------QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~------~~d 78 (310)
|+++||||++.||+++++.|+++|++|++++|+... .....+++|+.+......+.. ..+
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhhcccccc
Confidence 789999999999999999999999999999998432 245677899998877666544 334
Q ss_pred EEEEcccchh-----------------------hhhHHHHHHHHHHc----------CCccEEcc-CCCCCCccccCCCC
Q 021596 79 VVISTVGHAL-----------------------LADQVKIIAAIKEA----------GNVTRFFP-SEFGNDVDRAHGAV 124 (310)
Q Consensus 79 ~Vi~~a~~~~-----------------------~~~~~~~~~aa~~~----------~~v~~~v~-s~~~~~~~~~~~~~ 124 (310)
.++..++... ......+...+... + -.++|. ||.... ..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~------~~ 140 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAF------EG 140 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHH------HC
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhc------cC
Confidence 4444443221 11122222222211 1 235555 443221 11
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeEeeccchHH
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIA 197 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 197 (310)
.|....|+.+|+.++.+.+. .|+++..|.||.+................. ...+. ...+..++|+|
T Consensus 141 ~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~-~~~~~------~~R~g~pedvA 213 (241)
T d1uaya_ 141 QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLA-AQVPF------PPRLGRPEEYA 213 (241)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHH-TTCCS------SCSCCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHH-hcCCC------CCCCcCHHHHH
Confidence 23467899999999887764 589999999999876533221110000000 00010 01356789999
Q ss_pred HHHHHHhcCCccCCceEEEcC
Q 021596 198 TYTIKAVDDPRTLNKNLYIQP 218 (310)
Q Consensus 198 ~~~~~~l~~~~~~~~~~~~~~ 218 (310)
.+++.++.+..--|+++.+-|
T Consensus 214 ~~v~fL~s~~~iTG~~i~VDG 234 (241)
T d1uaya_ 214 ALVLHILENPMLNGEVVRLDG 234 (241)
T ss_dssp HHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHhCCCCCCCEEEECC
Confidence 999999876544567777754
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.33 E-value=3.5e-11 Score=97.42 Aligned_cols=189 Identities=17% Similarity=0.136 Sum_probs=104.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh--------c
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI--------K 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~--------~ 75 (310)
||.|+||||++.||+++++.|+++|++|++++|+..+ ...|+.+.+...... .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence 6789999999999999999999999999999998321 145666665444332 2
Q ss_pred CCCEEEEcccchh------------hhhHHH----HHHHHHHcCCccEE--ccCCCCCCc---cc---------------
Q 021596 76 QVDVVISTVGHAL------------LADQVK----IIAAIKEAGNVTRF--FPSEFGNDV---DR--------------- 119 (310)
Q Consensus 76 ~~d~Vi~~a~~~~------------~~~~~~----~~~aa~~~~~v~~~--v~s~~~~~~---~~--------------- 119 (310)
..|+++++++... ..+... ..+...+.. .... +.+.+.... ..
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~ 140 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence 4899999998643 111112 222222222 2221 111110000 00
Q ss_pred ---cCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCCCceeE
Q 021596 120 ---AHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDGNPKAV 189 (310)
Q Consensus 120 ---~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (310)
......+....|+.+|..++.+.+. .|+++..|.||.+............ ... ...........-
T Consensus 141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~-~~~~~~~~PlgR 215 (257)
T d1fjha_ 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP----RYG-ESIAKFVPPMGR 215 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------CCCSTTS
T ss_pred eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH----HHH-HHHHhcCCCCCC
Confidence 0001122345699999999888764 5899999999998765443221110 000 000110011124
Q ss_pred eeccchHHHHHHHHhcCCc--cCCceEEEc
Q 021596 190 YNKEDDIATYTIKAVDDPR--TLNKNLYIQ 217 (310)
Q Consensus 190 ~i~~~D~a~~~~~~l~~~~--~~~~~~~~~ 217 (310)
+..++|+|.++..++.+.. --|+.+.+-
T Consensus 216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vD 245 (257)
T d1fjha_ 216 RAEPSEMASVIAFLMSPAASYVHGAQIVID 245 (257)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEeC
Confidence 6789999999999885432 246667664
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.31 E-value=5.8e-12 Score=102.79 Aligned_cols=205 Identities=14% Similarity=0.093 Sum_probs=119.1
Q ss_pred CCceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhc----
Q 021596 3 SKSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 3 ~~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
+.|+++||||+| .||.++++.|.++|++|++..|+. .+. +.+.+........+++|+.+.+++.++++
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~-----~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR-----LRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSC-----HHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCCh-----HHHHHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence 358999999765 599999999999999999999883 222 22222224457889999999876665543
Q ss_pred ------CCCEEEEcccchh------------------------hhhHHHHHHHHHHcCCcc-EEccCCCCCCccccCCCC
Q 021596 76 ------QVDVVISTVGHAL------------------------LADQVKIIAAIKEAGNVT-RFFPSEFGNDVDRAHGAV 124 (310)
Q Consensus 76 ------~~d~Vi~~a~~~~------------------------~~~~~~~~~aa~~~~~v~-~~v~s~~~~~~~~~~~~~ 124 (310)
..|+++|+++... .........++.....-. .++.++.+.. ..
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~------~~ 153 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS------RA 153 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS------SC
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc------cc
Confidence 3699999998542 111111222222211011 1222221111 22
Q ss_pred CCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEec-----CCCceeEeec
Q 021596 125 EPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILG-----DGNPKAVYNK 192 (310)
Q Consensus 125 ~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~ 192 (310)
.|....|+.+|...+.+.+. .++++..|.||.+.......+................. ..-..+.+..
T Consensus 154 ~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~ 233 (268)
T d2h7ma1 154 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKD 233 (268)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTC
T ss_pred CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCC
Confidence 34467899999999888763 57999999999887654322221100000000000000 0000123677
Q ss_pred cchHHHHHHHHhcCC-c-cCCceEEEcC
Q 021596 193 EDDIATYTIKAVDDP-R-TLNKNLYIQP 218 (310)
Q Consensus 193 ~~D~a~~~~~~l~~~-~-~~~~~~~~~~ 218 (310)
++|+|+++..++.+. . --|+++.+-|
T Consensus 234 p~dva~~v~fL~Sd~a~~iTG~~i~vDG 261 (268)
T d2h7ma1 234 ATPVAKTVCALLSDWLPATTGDIIYADG 261 (268)
T ss_dssp CHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred HHHHHHHHHHHhCchhcCccCCEEEECc
Confidence 899999999988542 2 2456666643
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.29 E-value=1.4e-11 Score=101.33 Aligned_cols=196 Identities=12% Similarity=0.065 Sum_probs=114.8
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEE-----------------Ec
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFV-----------------VG 62 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v-----------------~~ 62 (310)
+|+.++||||++.||+++++.|+++|++|++..|+.... .....+.+. ......+ .+
T Consensus 1 ~~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 77 (284)
T d1e7wa_ 1 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 77 (284)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHH---HHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence 367889999999999999999999999999988873211 111112221 2223344 45
Q ss_pred cCCCHHHHHHHhc-------CCCEEEEcccchh---------------------------------hhhHHHHHHHHHH-
Q 021596 63 DVLNHESLVNAIK-------QVDVVISTVGHAL---------------------------------LADQVKIIAAIKE- 101 (310)
Q Consensus 63 D~~d~~~~~~~~~-------~~d~Vi~~a~~~~---------------------------------~~~~~~~~~aa~~- 101 (310)
|+++.++++++++ ++|++||++|... ..+...+.+++..
T Consensus 78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 157 (284)
T d1e7wa_ 78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 157 (284)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence 5888888877664 6999999998753 0111112222211
Q ss_pred --------cCCccEEcc-CCCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccc--ccc
Q 021596 102 --------AGNVTRFFP-SEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGY--FLP 163 (310)
Q Consensus 102 --------~~~v~~~v~-s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~--~~~ 163 (310)
.+....++. ++.... ...+....|+.+|..++.+.+. .|+++..|.||+.... ..+
T Consensus 158 ~~~~~~~~~~~~~~ii~~~s~~~~------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~ 231 (284)
T d1e7wa_ 158 VAGTPAKHRGTNYSIINMVDAMTN------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPP 231 (284)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTT------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCH
T ss_pred hhhhHHHhcCCCCccccccccccc------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCH
Confidence 111233444 222211 1223467899999999887763 5788999999853211 000
Q ss_pred ccCCCCCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 164 NLLQPGAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
..... .. ...+. ...+..++|+|++++.++.+.. --|+.+.+-|
T Consensus 232 ~~~~~----~~-~~~pl------~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG 277 (284)
T d1e7wa_ 232 AVWEG----HR-SKVPL------YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 277 (284)
T ss_dssp HHHHH----HH-TTCTT------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHH----HH-hcCCC------CCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence 00000 00 00000 0135678999999999886432 2466777754
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=2.3e-11 Score=99.52 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=63.2
Q ss_pred ceE-EEEccCcchhHHHHHHHHhC-CCCEEEEEcCCCCCCCchh-hHhHhhhc--CCcEEEEccCCCHHHHHHHhc----
Q 021596 5 SKI-LSIGGTGYIGKFIVEASVKA-GHPTFVLVRESTLSAPSKS-QLLDHFKN--LGVNFVVGDVLNHESLVNAIK---- 75 (310)
Q Consensus 5 ~~I-lI~GatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~~~~~~~---- 75 (310)
|+| +||||++.||..+++.|+++ |++|++..|+ .++. ...++++. ..+.++.+|++|.++++++++
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~ 77 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK 77 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHH
Confidence 455 89999999999999999986 8999999999 4343 23344433 458899999999999887665
Q ss_pred ---CCCEEEEcccchh
Q 021596 76 ---QVDVVISTVGHAL 88 (310)
Q Consensus 76 ---~~d~Vi~~a~~~~ 88 (310)
++|++||+||...
T Consensus 78 ~~g~iDiLVnNAGi~~ 93 (275)
T d1wmaa1 78 EYGGLDVLVNNAGIAF 93 (275)
T ss_dssp HHSSEEEEEECCCCCC
T ss_pred hcCCcEEEEEcCCcCC
Confidence 6899999999754
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.18 E-value=1.3e-10 Score=94.40 Aligned_cols=196 Identities=15% Similarity=0.053 Sum_probs=110.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh---cCCcEEEEccCCC----HHHHHHHh---
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK---NLGVNFVVGDVLN----HESLVNAI--- 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~---~~~~~~v~~D~~d----~~~~~~~~--- 74 (310)
+..+||||++.||.++++.|+++|++|+++.|+..+. .....+++. ......+..|..+ .+.+.+++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA---AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 78 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH---HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHH
Confidence 4679999999999999999999999999999984321 112223332 2345556655543 34443333
Q ss_pred ----cCCCEEEEcccchh------------------------------hhhHHHHHHHHHHcC--------CccEEcc-C
Q 021596 75 ----KQVDVVISTVGHAL------------------------------LADQVKIIAAIKEAG--------NVTRFFP-S 111 (310)
Q Consensus 75 ----~~~d~Vi~~a~~~~------------------------------~~~~~~~~~aa~~~~--------~v~~~v~-s 111 (310)
.++|+++|+||... ..............- ....++. +
T Consensus 79 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (266)
T d1mxha_ 79 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 158 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence 36999999998643 000011111111110 0111111 2
Q ss_pred CCCCCccccCCCCCCcchhhHHHHHHHHHHHHH-------cCCCEEEEecceeccccccccCCCCCCCCCCCeEEEecCC
Q 021596 112 EFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEA-------EGIPYTYVESYCFDGYFLPNLLQPGAAAPPRDKVVILGDG 184 (310)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~-------~~~~~~i~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (310)
+.... ...|....|+.+|..++.+.+. .|+++..|.||++....... ....-.+...-
T Consensus 159 ~~~~~------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---------~~~~~~~~~~~ 223 (266)
T d1mxha_ 159 DAMTD------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---------QETQEEYRRKV 223 (266)
T ss_dssp CGGGG------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---------HHHHHHHHTTC
T ss_pred hcccc------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---------HHHHHHHHhcC
Confidence 22111 2334578899999999887753 58999999999865321100 00000000000
Q ss_pred CceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 185 NPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 185 ~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
...+.+..++|+|.+++.++.+.. --|+.+.+-|
T Consensus 224 pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG 259 (266)
T d1mxha_ 224 PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG 259 (266)
T ss_dssp TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence 000234678999999999996542 2466677753
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.16 E-value=3.4e-11 Score=92.83 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=66.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHh-Hhh-hcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLL-DHF-KNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~l-~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+||||+|.||+.+++.|+++|.+|+++.|+ .++...+ +.+ ....+.+..+|+.|.+++++++.++|+||
T Consensus 23 gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili 97 (191)
T d1luaa1 23 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 97 (191)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhhccchhhcccc-----hHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence 5899999999999999999999999999999999 3333222 222 22456788899999999999999999999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
|+++..
T Consensus 98 n~Ag~g 103 (191)
T d1luaa1 98 TAGAIG 103 (191)
T ss_dssp ECCCTT
T ss_pred ecCccc
Confidence 999864
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.96 E-value=3.5e-10 Score=93.35 Aligned_cols=199 Identities=8% Similarity=0.037 Sum_probs=106.2
Q ss_pred CceEEEEccCc--chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--------------cCCc-EEEEcc--C
Q 021596 4 KSKILSIGGTG--YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--------------NLGV-NFVVGD--V 64 (310)
Q Consensus 4 ~~~IlI~GatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--------------~~~~-~~v~~D--~ 64 (310)
.|+++||||+| .||..+++.|+++|.+|++..|+.. .......+. .... .....| +
T Consensus 8 gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA-----LNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH-----HHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh-----hhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 47999999987 7999999999999999999988621 100000000 0011 111222 1
Q ss_pred ---------------------CCHHHH----HHHhcCCCEEEEcccchh---------------------hhhHHHHHHH
Q 021596 65 ---------------------LNHESL----VNAIKQVDVVISTVGHAL---------------------LADQVKIIAA 98 (310)
Q Consensus 65 ---------------------~d~~~~----~~~~~~~d~Vi~~a~~~~---------------------~~~~~~~~~a 98 (310)
.+.+.+ .+.+.++|+++|+|+... ......+.++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 122222 223347999999998632 2222333444
Q ss_pred HHHcCCc-cE-EccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHH--------HcCCCEEEEecceeccccccccCCC
Q 021596 99 IKEAGNV-TR-FFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVE--------AEGIPYTYVESYCFDGYFLPNLLQP 168 (310)
Q Consensus 99 a~~~~~v-~~-~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~--------~~~~~~~i~rp~~~~~~~~~~~~~~ 168 (310)
+.....- .. ++.++.+... ...+....|+.+|.....+.+ +.++++..|.||++...........
T Consensus 163 ~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~ 237 (297)
T d1d7oa_ 163 FLPIMNPGGASISLTYIASER-----IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI 237 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTS-----CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred HHHHhhcCCcceeeeehhhcc-----cccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC
Confidence 3332100 11 2222221111 112234678889988766553 3589999999998876543221100
Q ss_pred CCCCCCCCeEEEecCCCceeEeeccchHHHHHHHHhcCCc--cCCceEEEcC
Q 021596 169 GAAAPPRDKVVILGDGNPKAVYNKEDDIATYTIKAVDDPR--TLNKNLYIQP 218 (310)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 218 (310)
...............+..++|+|.+++.++.+.. --|+++++-|
T Consensus 238 ------~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDG 283 (297)
T d1d7oa_ 238 ------DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283 (297)
T ss_dssp ------HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ------HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence 0000000000011246789999999999986432 2466777753
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.91 E-value=5.6e-09 Score=75.01 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=73.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
|+|+|+|+ |.+|+.+++.|.+.|++|+++.++ +++.+.+. ...+..++.+|..|++.+.++ ++++|.++.+
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d-----~~~~~~~~--~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKAS--AEIDALVINGDCTKIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHH--HHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC-----hhhhhhhh--hhhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence 79999996 999999999999999999999998 54543222 124789999999999999988 4689999998
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
..... ...-+...++..+ .+++|.
T Consensus 73 t~~d~--~N~~~~~~~k~~~-~~~iI~ 96 (132)
T d1lssa_ 73 TGKEE--VNLMSSLLAKSYG-INKTIA 96 (132)
T ss_dssp CSCHH--HHHHHHHHHHHTT-CCCEEE
T ss_pred CCcHH--HHHHHHHHHHHcC-CceEEE
Confidence 77642 2233344566777 666654
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=9.3e-08 Score=68.60 Aligned_cols=95 Identities=18% Similarity=0.341 Sum_probs=72.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
|+++|+| .|.+|+++++.|.+.|++|+++..+ +++. +.+...+...+.+|.++++.+.++ ++++|.|+.+
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d-----~~~~---~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~ 71 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDIN-----EEKV---NAYASYATHAVIANATEENELLSLGIRNFEYVIVA 71 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESC-----HHHH---HHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCc-----HHHH---HHHHHhCCcceeeecccchhhhccCCccccEEEEE
Confidence 5789998 5999999999999999999999998 4444 555677888999999999999888 6789999988
Q ss_pred ccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+... .....+..+++..+ ..+++.
T Consensus 72 ~~~~~-~~~~~~~~~~~~~~-~~~iia 96 (134)
T d2hmva1 72 IGANI-QASTLTTLLLKELD-IPNIWV 96 (134)
T ss_dssp CCSCH-HHHHHHHHHHHHTT-CSEEEE
T ss_pred cCchH-HhHHHHHHHHHHcC-CCcEEe
Confidence 87542 22222333444455 566554
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.62 E-value=2e-07 Score=77.52 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=29.6
Q ss_pred ceEEEEc--cCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIG--GTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~G--atG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
+..|||| ++..||..+++.|.++|.+|.+..|+
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~ 37 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP 37 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence 6789999 55699999999999999999998876
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=2.4e-07 Score=66.88 Aligned_cols=91 Identities=15% Similarity=0.257 Sum_probs=58.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-C---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-H---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|++|.|+||||++|+.+++.|+++. + +++.+.++.+.. +. .....-.....++.+.+. ++++|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g---~~-----~~~~~~~~~~~~~~~~~~----~~~~Di 68 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ---AA-----PSFGGTTGTLQDAFDLEA----LKALDI 68 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS---BC-----CGGGTCCCBCEETTCHHH----HHTCSE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccc---cc-----ccccCCceeeecccchhh----hhcCcE
Confidence 6699999999999999999888764 3 466666554322 11 001111112223344333 578999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+|.+++. .....+...+.+.| .+-+|.
T Consensus 69 vF~a~~~---~~s~~~~~~~~~~g-~~~~VI 95 (146)
T d1t4ba1 69 IVTCQGG---DYTNEIYPKLRESG-WQGYWI 95 (146)
T ss_dssp EEECSCH---HHHHHHHHHHHHTT-CCCEEE
T ss_pred EEEecCc---hHHHHhhHHHHhcC-CCeecc
Confidence 9999985 45777888888888 654444
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.47 E-value=1.2e-06 Score=65.88 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=67.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|| |.+|+++++.|.++||+|+++.|+ ..+.+.+.. .-........+..+.......+...|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~-----~~~a~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSA-GVQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHT-TCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----hHHHHHHHh-cccccccccccccchhhhHhhhhccceeEee
Confidence 489999985 999999999999999999999999 444432222 1123445556777788888888899999988
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+.. ........+.+.+
T Consensus 75 ~~~~---~~~~~~~~~~~~~ 91 (182)
T d1e5qa1 75 IPYT---FHATVIKSAIRQK 91 (182)
T ss_dssp SCGG---GHHHHHHHHHHHT
T ss_pred ccch---hhhHHHHHHHhhc
Confidence 7654 3455666776665
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.27 E-value=2e-06 Score=61.78 Aligned_cols=90 Identities=19% Similarity=0.315 Sum_probs=56.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-C---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-H---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|||.|+||||++|+.+++.|+++. | ++..++.+.+.. +.. .+. +-.....+..+.+ .++++|+|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~g---k~~---~~~--~~~~~~~~~~~~~----~~~~~Dvv 68 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV---PAP---NFG--KDAGMLHDAFDIE----SLKQLDAV 68 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSS---BCC---CSS--SCCCBCEETTCHH----HHTTCSEE
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccc---ccc---ccC--Ccceeeecccchh----hhccccEE
Confidence 689999999999999999998754 4 455444442211 110 010 1111111223433 35789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|.+++.. .+..+...+.+.| .+-+|.
T Consensus 69 F~alp~~---~s~~~~~~l~~~g-~~~~VI 94 (147)
T d1mb4a1 69 ITCQGGS---YTEKVYPALRQAG-WKGYWI 94 (147)
T ss_dssp EECSCHH---HHHHHHHHHHHTT-CCSEEE
T ss_pred EEecCch---HHHHHhHHHHHcC-CceEEE
Confidence 9999854 5778888888888 654343
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.21 E-value=5.8e-06 Score=59.39 Aligned_cols=91 Identities=19% Similarity=0.168 Sum_probs=61.3
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCC-cEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
||.|+||+|.+|+.++..|..+|. +++.++.+ ..+.... .+.+.. ......- ....+..+.++++|+|+.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~-----~~~~~a~-Dl~~~~~~~~~~~~-~~~~~~~~~~~~aDivVi 74 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA-----HTPGVAA-DLSHIETRATVKGY-LGPEQLPDCLKGCDVVVI 74 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS-----SHHHHHH-HHTTSSSSCEEEEE-ESGGGHHHHHTTCSEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEecc-----ccchhhH-HHhhhhhhcCCCeE-EcCCChHHHhCCCCEEEE
Confidence 899999999999999999999883 68888876 3343332 333322 1111211 234555677899999999
Q ss_pred cccchh-------------hhhHHHHHHHHHHcC
Q 021596 83 TVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|... ....+.+++++.+.+
T Consensus 75 tag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~ 108 (144)
T d1mlda1 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC 108 (144)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence 998543 444566777777765
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.15 E-value=6.5e-06 Score=59.30 Aligned_cols=90 Identities=18% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHh-Hhh-----hcCCcEEEEccCCCHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLL-DHF-----KNLGVNFVVGDVLNHESLVN 72 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~-~~l-----~~~~~~~v~~D~~d~~~~~~ 72 (310)
|...|||.|+|+ |++|+.++..|+.+| .+|++++++. .+.+-. ..+ ......+..+|..
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~-----~~~~g~a~Dl~~a~~~~~~~~~~~~d~~------- 68 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK-----DRTKGDALDLEDAQAFTAPKKIYSGEYS------- 68 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH-----HHHHHHHHHHHGGGGGSCCCEEEECCGG-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeeccc-----chhHHHHHHHhccccccCCceEeeccHH-------
Confidence 566789999995 999999999999988 5899999883 222110 111 1223455556542
Q ss_pred HhcCCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 73 AIKQVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
.++++|+|+.+++... ....+.+++.+.+.+
T Consensus 69 ~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~ 112 (146)
T d1ez4a1 69 DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG 112 (146)
T ss_dssp GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT
T ss_pred HhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3679999999998654 223445666666654
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.08 E-value=5.8e-06 Score=60.89 Aligned_cols=32 Identities=34% Similarity=0.384 Sum_probs=30.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|.+|+.+++.|+++||+|++..|+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~ 32 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN 32 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6899998 8999999999999999999999998
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.06 E-value=9.2e-06 Score=58.39 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=55.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC---CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH---PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+|+|.|+||||++|+.+++.|.+++| ++..++.+.+.. +.+....-+...-++.+ ..+.++|++
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G--------k~i~~~~~~~~~~~~~~-----~~~~~~d~v 68 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG--------QRMGFAESSLRVGDVDS-----FDFSSVGLA 68 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT--------CEEEETTEEEECEEGGG-----CCGGGCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC--------cceeeccccchhccchh-----hhhccceEE
Confidence 58999999999999999999987654 576665543221 11111111222222211 125689999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|.+++.. .+..+...+.+.| . ++|-
T Consensus 69 f~a~p~~---~s~~~~~~~~~~g-~-~VID 93 (144)
T d2hjsa1 69 FFAAAAE---VSRAHAERARAAG-C-SVID 93 (144)
T ss_dssp EECSCHH---HHHHHHHHHHHTT-C-EEEE
T ss_pred EecCCcc---hhhhhccccccCC-c-eEEe
Confidence 9998753 4666677777777 4 4443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=8.1e-06 Score=58.65 Aligned_cols=90 Identities=11% Similarity=0.067 Sum_probs=55.5
Q ss_pred ceEEEEccCcchhHHHHHHHHh-CC--CCEEEEEcCCCCCCCchhhHhHhhhcCCc---EEEEccCCCHHHHHHHhcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVK-AG--HPTFVLVRESTLSAPSKSQLLDHFKNLGV---NFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~-~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~~~---~~v~~D~~d~~~~~~~~~~~d 78 (310)
|||.|+|++|.+|++++..|.. .+ .++..++... ........+.+... ......-.+. ++++++|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-----~~~g~a~Dl~h~~~~~~~~~~~~~~~~----~~~~~aD 71 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-----VTPGVAVDLSHIPTAVKIKGFSGEDAT----PALEGAD 71 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-----THHHHHHHHHTSCSSCEEEEECSSCCH----HHHTTCS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-----cchhHHHHHHCCccccCCcEEEcCCCc----cccCCCC
Confidence 7999999999999999988754 34 6788887652 12122223333221 1111222232 2577999
Q ss_pred EEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 79 VVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 79 ~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
+|+.++|... ....+.+.+.+.+.+
T Consensus 72 vvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~ 109 (145)
T d2cmda1 72 VVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC 109 (145)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC
Confidence 9999998653 333455666666664
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=5.2e-05 Score=55.02 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=71.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~ 82 (310)
-+|+|+| .|.+|..+++.|.+.|++|+++..+ +++. ...+.+...++.++.||.+|++.++++ ++.+++|+.
T Consensus 4 nHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d-----~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~ 77 (153)
T d1id1a_ 4 DHFIVCG-HSILAINTILQLNQRGQNVTVISNL-----PEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECC-----CHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecc-----chhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEE
Confidence 4689998 5999999999999999999999987 4322 233445567899999999999998776 347999999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+.+.. .....++..+++.+...++|
T Consensus 78 ~~~~d--~~n~~~~~~~r~~~~~~~ii 102 (153)
T d1id1a_ 78 LSDND--ADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp CSSCH--HHHHHHHHHHHHHTSSSCEE
T ss_pred ccccH--HHHHHHHHHHHHhCCCCceE
Confidence 88764 23444555566643233444
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.01 E-value=7e-06 Score=59.79 Aligned_cols=35 Identities=31% Similarity=0.492 Sum_probs=33.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|++|+|+||.|.+|+.+++.|.+.||+|++.+|+.
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~ 43 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 43 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence 68999999999999999999999999999999983
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.01 E-value=1.6e-05 Score=58.44 Aligned_cols=93 Identities=23% Similarity=0.154 Sum_probs=58.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh----------cCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK----------NLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~----------~~~~~~v~~D~~d~~~~~~~ 73 (310)
|++|.++| .|.+|+.+++.|+++||+|++..|+ +++.+.+.... -....++..-+.+.+..+.+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~-----~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v 74 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 74 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECc-----hhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHH
Confidence 67999998 8999999999999999999999998 33332221110 01123344444444444444
Q ss_pred hc----------CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 74 IK----------QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 74 ~~----------~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+. .=++|+++.... ...+..+.+.+++.|
T Consensus 75 ~~~~~~~~~~l~~g~iiid~st~~-p~~~~~~~~~~~~~g 113 (162)
T d3cuma2 75 YLDDDGLLAHIAPGTLVLECSTIA-PTSARKIHAAARERG 113 (162)
T ss_dssp HHSTTCHHHHSCTTCEEEECSCCC-HHHHHHHHHHHHHTT
T ss_pred HhccccccccCCCCCEEEECCCCC-HHHHHHHHHHHHHCC
Confidence 32 124555555444 355667777777766
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.00 E-value=1.5e-06 Score=63.54 Aligned_cols=81 Identities=11% Similarity=0.005 Sum_probs=48.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCC----C-E--EEEEcCCCCCCCchhhHhH-hhhc---CCcEEEEccCCCHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGH----P-T--FVLVRESTLSAPSKSQLLD-HFKN---LGVNFVVGDVLNHES 69 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~----~-V--~~~~R~~~~~~~~~~~~~~-~l~~---~~~~~v~~D~~d~~~ 69 (310)
|+.+|||.|+||+|++|++++..|...+. . + ..+.-... ..+..... .+.. .....+...-.
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 73 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLLAGLEATDD---- 73 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEESC----
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccc---hhhHcCchhhhhccccccccccccCCc----
Confidence 88889999999999999999999998762 1 1 11111100 11221111 1112 12333333322
Q ss_pred HHHHhcCCCEEEEcccchh
Q 021596 70 LVNAIKQVDVVISTVGHAL 88 (310)
Q Consensus 70 ~~~~~~~~d~Vi~~a~~~~ 88 (310)
..++++++|+|+.++|...
T Consensus 74 ~~~~~~~advViitaG~~~ 92 (154)
T d1y7ta1 74 PKVAFKDADYALLVGAAPR 92 (154)
T ss_dssp HHHHTTTCSEEEECCCCCC
T ss_pred hhhhcccccEEEeecCcCC
Confidence 2356889999999998754
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.99 E-value=2.6e-06 Score=64.98 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=31.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|||.|+||+|.+|+.+++.|+++||+|.+..|+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~ 33 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 789999999999999999999999999999998
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.99 E-value=1.6e-05 Score=59.43 Aligned_cols=99 Identities=19% Similarity=0.179 Sum_probs=56.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEc-CCCCCCCchhhHh-Hhhhc-CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVR-ESTLSAPSKSQLL-DHFKN-LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R-~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|++|.|+||||++|+.+++.|.++. +++..+.. ........+.... ..+.. ........+ +. ...+.++|+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~dv 75 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMS--DV---RDFSADVDV 75 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEES--CG---GGTCTTCCE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccch--hh---hhhhcccce
Confidence 7899999999999999999999974 57765543 3222212222111 11111 111122211 11 122457999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
||.+.+.. ....+.....+.+ ++.+=.|
T Consensus 76 vf~alp~~---~s~~~~~~~~~~~-~~vIDlS 103 (179)
T d2g17a1 76 VFLATAHE---VSHDLAPQFLQAG-CVVFDLS 103 (179)
T ss_dssp EEECSCHH---HHHHHHHHHHHTT-CEEEECS
T ss_pred eeccccch---hHHHHhhhhhhcC-ceeeccc
Confidence 99998854 4555666666666 4333334
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.95 E-value=6.6e-06 Score=60.83 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=54.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC-cEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG-VNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|||+|+|+ |.+|+.++..|.+.||+|.++.|+.... .......... .........+.+ .+.++|+||.+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~D~iii~ 70 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY-----CSVNLVETDGSIFNESLTANDPD----FLATSDLLLVT 70 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE-----EEEEEECTTSCEEEEEEEESCHH----HHHTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh-----hhhccccCCccccccccccchhh----hhcccceEEEe
Confidence 79999996 9999999999999999999999985432 1111111111 111111122333 34589999999
Q ss_pred ccchhhhhHHHHHHHHHHc
Q 021596 84 VGHALLADQVKIIAAIKEA 102 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~ 102 (310)
..... +..+++.++..
T Consensus 71 vka~~---~~~~~~~l~~~ 86 (167)
T d1ks9a2 71 LKAWQ---VSDAVKSLAST 86 (167)
T ss_dssp SCGGG---HHHHHHHHHTT
T ss_pred ecccc---hHHHHHhhccc
Confidence 88653 55556666543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.95 E-value=5.5e-05 Score=54.15 Aligned_cols=92 Identities=25% Similarity=0.222 Sum_probs=58.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhh-HhHhhh------cCCcEEEEccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQ-LLDHFK------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|||.|+||+|.+|+.++..|+.++ .++..+.++... .+.+ ....+. ....++....-.|. +.++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~---~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~ 73 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSI---NKLEGLREDIYDALAGTRSDANIYVESDENL----RIID 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGH---HHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhh---HhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence 689999999999999999999998 489999887321 1111 111121 12234332211232 2477
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|+|+.+||... ....+.+++...+.+
T Consensus 74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~ 114 (145)
T d1hyea1 74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC 114 (145)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC
Confidence 9999999998644 333455666666664
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.94 E-value=1.1e-05 Score=59.62 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=53.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|||.|+| .|.+|+.+++.|.+.|++|++++|+ ++..+ .....+. ....- +. ++++++|+||.+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~-----~~~~~---~a~~~~~~~~~~~---~~----~~~~~~DiIila 64 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQ-----QSTCE---KAVERQLVDEAGQ---DL----SLLQTAKIIFLC 64 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHH---HHHHTTSCSEEES---CG----GGGTTCSEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----chHHH---HHHHhhccceeee---ec----cccccccccccc
Confidence 7899998 6999999999999999999999998 33332 2223332 11111 11 356799999998
Q ss_pred ccchhhhhHHHHHHHHHHc
Q 021596 84 VGHALLADQVKIIAAIKEA 102 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~ 102 (310)
++.. ....+++.....
T Consensus 65 vp~~---~~~~vl~~l~~~ 80 (165)
T d2f1ka2 65 TPIQ---LILPTLEKLIPH 80 (165)
T ss_dssp SCHH---HHHHHHHHHGGG
T ss_pred CcHh---hhhhhhhhhhhh
Confidence 8743 455555555443
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.94 E-value=1.1e-05 Score=60.61 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=59.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|+|.|+| +|.+|..++..|.++||+|.+++|+ +++.+...... .++.+..........++.++++++|+
T Consensus 2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~ 75 (184)
T d1bg6a2 2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADV 75 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSE
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCE
Confidence 7999999 5999999999999999999999998 44443322211 11122222211112345678889999
Q ss_pred EEEcccchhhhhHHHHHHHHHHc
Q 021596 80 VISTVGHALLADQVKIIAAIKEA 102 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~ 102 (310)
||.+.... ....+++.++..
T Consensus 76 iii~v~~~---~~~~~~~~i~~~ 95 (184)
T d1bg6a2 76 ILIVVPAI---HHASIAANIASY 95 (184)
T ss_dssp EEECSCGG---GHHHHHHHHGGG
T ss_pred EEEEEchh---HHHHHHHHhhhc
Confidence 99998754 456666666654
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.94 E-value=6.5e-06 Score=61.14 Aligned_cols=76 Identities=17% Similarity=0.138 Sum_probs=46.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
|++|.|+||||++|+.+++.|.++. .++..+..+.+. ..+. ....+.-..-......+.+. ..+++|+||.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~a--G~~i---~~~~p~~~~~~~~~~~~~~~---~~~~~dvvf~ 72 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA--GKKL---EEIFPSTLENSILSEFDPEK---VSKNCDVLFT 72 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT--TSBH---HHHCGGGCCCCBCBCCCHHH---HHHHCSEEEE
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccC--CCcc---cccCchhhccccccccCHhH---hccccceEEE
Confidence 6799999999999999999999876 466666544222 1122 11111111111122234443 3457999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 73 a~p~~ 77 (176)
T d1vkna1 73 ALPAG 77 (176)
T ss_dssp CCSTT
T ss_pred ccccH
Confidence 98865
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.84 E-value=2e-05 Score=58.46 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=53.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
..+|+|+||+|-+|...++.+...|.+|++++++ +++.+.++. .++..+. |..+...-....+++|+||.+
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~-----~~~~~~~~~---lGa~~~i-~~~~~~~~~~~~~g~D~v~d~ 98 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLA---LGAEEAA-TYAEVPERAKAWGGLDLVLEV 98 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHH---TTCSEEE-EGGGHHHHHHHTTSEEEEEEC
T ss_pred CCEEEEEeccccchhhhhhhhccccccccccccc-----ccccccccc---cccceee-ehhhhhhhhhccccccccccc
Confidence 3589999999999999999999999999999988 445544443 4543332 444433333334589999998
Q ss_pred ccc
Q 021596 84 VGH 86 (310)
Q Consensus 84 a~~ 86 (310)
.|.
T Consensus 99 ~G~ 101 (171)
T d1iz0a2 99 RGK 101 (171)
T ss_dssp SCT
T ss_pred cch
Confidence 873
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=5.9e-05 Score=51.26 Aligned_cols=90 Identities=13% Similarity=0.312 Sum_probs=65.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
..||.|+| +|.+|+-++....+.|++|++++.+.... . ..-.-+.+.+|+.|.+.+.+... ++|+|-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P-A---------~~va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP-A---------MHVAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG-G---------GGGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc-h---------hhcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 36899999 69999999999999999999999885432 1 01245788899999999988775 689985
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.-.-.. ....++.+.+.| ..+++
T Consensus 80 ~E~EnI----~~~~L~~le~~g--~~v~P 102 (111)
T d1kjqa2 80 PEIEAI----ATDMLIQLEEEG--LNVVP 102 (111)
T ss_dssp ECSSCS----CHHHHHHHHHTT--CEESS
T ss_pred EEecCc----CHHHHHHHHHCC--CeECC
Confidence 533322 234555665554 34544
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.82 E-value=2.5e-05 Score=58.64 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=60.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEE-ccCCCHHHHHHHhc--CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVV-GDVLNHESLVNAIK--QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~-~D~~d~~~~~~~~~--~~d~V 80 (310)
.+|+|+||+|.+|...++.....|.+|++++|+ +++.+.++ ..+.. ++. .|-...+.+.+... ++|+|
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~-----~~~~~~~~---~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v 102 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLK---QIGFDAAFNYKTVNSLEEALKKASPDGYDCY 102 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH---HTTCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCC-----HHHHHHHH---hhhhhhhcccccccHHHHHHHHhhcCCCcee
Confidence 689999999999999999999999999999998 55554433 34543 333 33333444444444 69999
Q ss_pred EEcccchhhhhHHHHHHHHHHcC
Q 021596 81 ISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|++.|.. .....+++++..|
T Consensus 103 ~D~vG~~---~~~~~~~~l~~~G 122 (182)
T d1v3va2 103 FDNVGGE---FLNTVLSQMKDFG 122 (182)
T ss_dssp EESSCHH---HHHHHGGGEEEEE
T ss_pred EEecCch---hhhhhhhhccCCC
Confidence 9999832 2334445554444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.82 E-value=4.4e-05 Score=54.98 Aligned_cols=73 Identities=19% Similarity=0.336 Sum_probs=49.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhh------cCCcEEEEccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
..||.|+|| |++|+.++..|+.+|. ++..++++.+.. +... ..+. ...+.+...|. +.++
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~---~g~a-~Dl~~~~~~~~~~~~~~~~d~-------~~l~ 73 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKA---IGDA-MDFNHGKVFAPKPVDIWHGDY-------DDCR 73 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH---HHHH-HHHHHHTTSSSSCCEEEECCG-------GGTT
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccc---cchh-ccHhhCccccCCCeEEEECCH-------HHhc
Confidence 469999996 9999999999999884 799999873221 1111 1121 22344444444 2477
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|+.+++...
T Consensus 74 daDvvvitag~~~ 86 (148)
T d1ldna1 74 DADLVVICAGANQ 86 (148)
T ss_dssp TCSEEEECCSCCC
T ss_pred cceeEEEeccccc
Confidence 9999999998654
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.81 E-value=1.9e-05 Score=49.74 Aligned_cols=44 Identities=20% Similarity=0.294 Sum_probs=37.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF 52 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l 52 (310)
.++|+|+||+|.+|...++.+...|.+|++++++ +++.+.++++
T Consensus 32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s-----~~k~~~~~~l 75 (77)
T d1o8ca2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL 75 (77)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH
T ss_pred CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHHC
Confidence 3589999999999999999999999999999998 6666555543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.79 E-value=4.8e-06 Score=62.97 Aligned_cols=80 Identities=13% Similarity=0.204 Sum_probs=54.0
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhcC
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
..|+||+|+| +|.-|.+++..|.++||+|++..|+ ++..+.+..-. .+++.+ .-++.-..++.+++++
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~-----~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ 77 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNG 77 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTT
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec-----HHHHHHHhhccccccccccccc-ccccccchhhhhccCC
Confidence 3477899999 6999999999999999999999998 43333222211 122221 0111112346778899
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.+.+...
T Consensus 78 ad~iiiavPs~~ 89 (189)
T d1n1ea2 78 AEIILFVIPTQF 89 (189)
T ss_dssp CSCEEECSCHHH
T ss_pred CCEEEEcCcHHH
Confidence 999999887543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=7.6e-05 Score=49.10 Aligned_cols=86 Identities=21% Similarity=0.238 Sum_probs=61.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+|. |..|..+++.|.++|++|++.+.+.... .. +.+ ..+..+..+... .+ .+.++|.||..
T Consensus 5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~---~~---~~~-~~~~~~~~~~~~-~~----~~~~~d~vi~S 71 (93)
T d2jfga1 5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP---GL---DKL-PEAVERHTGSLN-DE----WLMAADLIVAS 71 (93)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT---TG---GGS-CTTSCEEESBCC-HH----HHHHCSEEEEC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch---hH---HHH-hhccceeecccc-hh----hhccCCEEEEC
Confidence 478999995 8999999999999999999999875432 11 222 335556666542 22 34578999998
Q ss_pred ccchhhhhHHHHHHHHHHcCCcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
.|.. ....+++.|++.| ++
T Consensus 72 PGi~---~~~~~~~~a~~~g-i~ 90 (93)
T d2jfga1 72 PGIA---LAHPSLSAAADAG-IE 90 (93)
T ss_dssp TTSC---TTSHHHHHHHHTT-CE
T ss_pred CCCC---CCCHHHHHHHHcC-CC
Confidence 8854 3456888888887 64
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.75 E-value=8.5e-05 Score=54.84 Aligned_cols=88 Identities=24% Similarity=0.298 Sum_probs=59.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEcc--CCCHHHHHHHhc-----C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGD--VLNHESLVNAIK-----Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D--~~d~~~~~~~~~-----~ 76 (310)
.+|+|+| +|.+|...++.+...|.+|+++.++ +.+.+..+.+ +. ..+..| -.+.+...+.++ +
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~-----~~r~~~a~~~---ga~~~~~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNC---GADVTLVVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CEEEEEc-ccccchhhHhhHhhhcccccccchH-----HHHHHHHHHc---CCcEEEeccccccccchhhhhhhcccccC
Confidence 5899997 7999999999999999999999998 6666555544 33 222222 234444444433 6
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+|+||.+++... .....++.++..|
T Consensus 99 ~D~vid~~g~~~--~~~~a~~~~~~~G 123 (170)
T d1e3ja2 99 PNVTIDCSGNEK--CITIGINITRTGG 123 (170)
T ss_dssp CSEEEECSCCHH--HHHHHHHHSCTTC
T ss_pred CceeeecCCChH--HHHHHHHHHhcCC
Confidence 999999998642 2344556666555
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.74 E-value=0.00016 Score=53.62 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=49.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
+.+|.|+| .|.+|+.+++.|++.||+|+++.|+ +++.+.+........... -....+++.+++..+|.++.+
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~~~~~--~a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKVL--GAHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSCE--ECSSHHHHHHHBCSSCEEEEC
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHhcccccccc--chhhhhhhhhhhcccceEEEe
Confidence 46899999 7999999999999999999999999 545432221111100000 123455666666666666666
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
....
T Consensus 74 ~~~~ 77 (176)
T d2pgda2 74 VKAG 77 (176)
T ss_dssp SCTT
T ss_pred cCch
Confidence 5543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.73 E-value=0.00015 Score=49.52 Aligned_cols=86 Identities=13% Similarity=0.061 Sum_probs=65.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|+|+| +|.+|.+-++.|++.|.+|++++...+. +........+++++..++.+.+ +.+++.|+.+
T Consensus 12 ~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~------~~~~~~~~~~i~~~~~~~~~~d-----l~~~~lv~~a 79 (113)
T d1pjqa1 12 DRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIP------QFTVWANEGMLTLVEGPFDETL-----LDSCWLAIAA 79 (113)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCH------HHHHHHTTTSCEEEESSCCGGG-----GTTCSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCCh------HHHHHHhcCCceeeccCCCHHH-----hCCCcEEeec
Confidence 47999999 6999999999999999999998876331 1222334457888888776533 6789999988
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+.. .....+.+.|++.+
T Consensus 80 t~d~--~~n~~i~~~a~~~~ 97 (113)
T d1pjqa1 80 TDDD--TVNQRVSDAAESRR 97 (113)
T ss_dssp CSCH--HHHHHHHHHHHHTT
T ss_pred CCCH--HHHHHHHHHHHHcC
Confidence 7654 34567888898887
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=2.7e-05 Score=57.90 Aligned_cols=87 Identities=13% Similarity=0.195 Sum_probs=58.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH---HHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE---SLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~~~~~~~--~~d~ 79 (310)
.+|||+||+|.+|...++.+...|.+|++++++ +++.+.+++ .++..+ .|..+.+ .+.+... ++|+
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~-----~~~~~~~~~---~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~ 100 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQ---NGAHEV-FNHREVNYIDKIKKYVGEKGIDI 100 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHH---TTCSEE-EETTSTTHHHHHHHHHCTTCEEE
T ss_pred CEEEEEeccccccccccccccccCccccccccc-----ccccccccc---cCcccc-cccccccHHHHhhhhhccCCceE
Confidence 589999999999999999999999999999987 555544443 354322 2444443 3333333 5899
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+++.+.. .....++.++..|
T Consensus 101 v~d~~g~~---~~~~~~~~l~~~G 121 (174)
T d1yb5a2 101 IIEMLANV---NLSKDLSLLSHGG 121 (174)
T ss_dssp EEESCHHH---HHHHHHHHEEEEE
T ss_pred EeecccHH---HHHHHHhccCCCC
Confidence 99998742 2334455555444
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=6.7e-05 Score=56.15 Aligned_cols=81 Identities=14% Similarity=0.221 Sum_probs=60.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchh-hHhHhhh-cCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKS-QLLDHFK-NLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~-~~~~~l~-~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++|+|+| +|..|++++..|.+.|. +++++.|+.+.. ++. ...+.+. .........++.+.+.+.+.+..+|+|
T Consensus 18 ~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 18 GKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFF--DKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTH--HHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHH--HHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 47999999 58999999999999995 688899984332 111 1122222 234556678999999999999999999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|++++..
T Consensus 95 IN~Tp~G 101 (182)
T d1vi2a1 95 TNGTKVG 101 (182)
T ss_dssp EECSSTT
T ss_pred ccccCCc
Confidence 9998754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.67 E-value=5.5e-05 Score=55.17 Aligned_cols=86 Identities=23% Similarity=0.386 Sum_probs=58.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+|+ |.+|+.+++.|..+|. ++++..|+ .++...+. ...+.+. .+.+++.+.+..+|+||.
T Consensus 24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt-----~~ka~~l~--~~~~~~~-----~~~~~~~~~l~~~Divi~ 90 (159)
T d1gpja2 24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELA--RDLGGEA-----VRFDELVDHLARSDVVVS 90 (159)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHH--HHHTCEE-----CCGGGHHHHHHTCSEEEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc-----HHHHHHHH--Hhhhccc-----ccchhHHHHhccCCEEEE
Confidence 579999996 9999999999999997 58888888 33442221 1223332 234567778889999999
Q ss_pred cccchhhhhHHHHH-HHHHHc
Q 021596 83 TVGHALLADQVKII-AAIKEA 102 (310)
Q Consensus 83 ~a~~~~~~~~~~~~-~aa~~~ 102 (310)
+++......+...+ .+++..
T Consensus 91 atss~~~ii~~~~i~~~~~~r 111 (159)
T d1gpja2 91 ATAAPHPVIHVDDVREALRKR 111 (159)
T ss_dssp CCSSSSCCBCHHHHHHHHHHC
T ss_pred ecCCCCccccHhhhHHHHHhc
Confidence 99865533333444 444444
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.65 E-value=2.6e-05 Score=58.54 Aligned_cols=87 Identities=22% Similarity=0.384 Sum_probs=59.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d~ 79 (310)
.+|||+||+|.+|..+++.+...|.+|++++++ +++.+.+ ...++..+ .|..+. +.+.+... ++|+
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~-----~~~~~~l---~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~ 97 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREML---SRLGVEYV-GDSRSVDFADEILELTDGYGVDV 97 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHH---HTTCCSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CEEEEECCCCCcccccchhhccccccceeeecc-----ccccccc---cccccccc-ccCCccCHHHHHHHHhCCCCEEE
Confidence 589999999999999999999999999999987 5455443 34454433 233333 34444443 6999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||++++.. .....+++++..|
T Consensus 98 v~d~~g~~---~~~~~~~~l~~~G 118 (183)
T d1pqwa_ 98 VLNSLAGE---AIQRGVQILAPGG 118 (183)
T ss_dssp EEECCCTH---HHHHHHHTEEEEE
T ss_pred EEecccch---HHHHHHHHhcCCC
Confidence 99999843 2334455554444
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.64 E-value=3.5e-05 Score=53.92 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=27.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVL 34 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~ 34 (310)
|||+|.|++|..|+.+.+.+.++|+++.+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 689999999999999999999999887654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.63 E-value=9.7e-05 Score=52.56 Aligned_cols=74 Identities=15% Similarity=0.095 Sum_probs=48.1
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhh-----cCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFK-----NLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
||.|+||+|.+|+.++..|+.++. ++..++.+.... ..+... ..+. .....+..+|.. .++++|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~-~~~g~a-~Dl~~~~~~~~~~~i~~~~~~-------~~~~aD 72 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKED-DTVGQA-ADTNHGIAYDSNTRVRQGGYE-------DTAGSD 72 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHH-HHHHHH-HHHHHHHTTTCCCEEEECCGG-------GGTTCS
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCccc-ccceee-cchhhcccccCCceEeeCCHH-------HhhhcC
Confidence 899999999999999999999983 677777542110 001111 1121 223444445442 257999
Q ss_pred EEEEcccchh
Q 021596 79 VVISTVGHAL 88 (310)
Q Consensus 79 ~Vi~~a~~~~ 88 (310)
+|+.++|...
T Consensus 73 iVvitaG~~~ 82 (142)
T d1o6za1 73 VVVITAGIPR 82 (142)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeccccc
Confidence 9999998644
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=6.8e-05 Score=55.44 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=48.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-hhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+| +|..+++++..|.+.|.+|+++.|+ .++.+.+.. +...+ .+...++.+.+ ...+|+||+
T Consensus 18 ~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt-----~~ka~~l~~~~~~~~-~~~~~~~~~~~-----~~~~dliIN 85 (170)
T d1nyta1 18 GLRILLIG-AGGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTG-SIQALSMDELE-----GHEFDLIIN 85 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGS-SEEECCSGGGT-----TCCCSEEEE
T ss_pred CCEEEEEC-CcHHHHHHHHHhcccceEEEeccch-----HHHHHHHHHHHhhcc-ccccccccccc-----ccccceeec
Confidence 47999999 5999999999999999999999998 445433322 22222 22223332221 246899999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 86 ~Tp~G 90 (170)
T d1nyta1 86 ATSSG 90 (170)
T ss_dssp CCSCG
T ss_pred ccccC
Confidence 98754
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.61 E-value=7.7e-05 Score=54.03 Aligned_cols=76 Identities=20% Similarity=0.171 Sum_probs=48.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHh-Hhhhc----CCcE-EEEccCCCHHHHHHH
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLL-DHFKN----LGVN-FVVGDVLNHESLVNA 73 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~-~~l~~----~~~~-~v~~D~~d~~~~~~~ 73 (310)
|.+++||.|+|+ |.+|+.++..|...+ .++++++.+.. +.+-. ..+.+ .+.. .+.++ ...+++
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~-----~~~g~a~Dl~~~~~~~~~~~~~~~~----~~~~~~ 73 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG-----MPEGKALDLSHVTSVVDTNVSVRAE----YSYEAA 73 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS-----HHHHHHHHHHHHHHHTTCCCCEEEE----CSHHHH
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccc-----cchhHHHHHhhhccccCCeeEEecc----Cchhhh
Confidence 445689999996 999999999888888 47888887743 22111 11111 1111 11111 122456
Q ss_pred hcCCCEEEEcccc
Q 021596 74 IKQVDVVISTVGH 86 (310)
Q Consensus 74 ~~~~d~Vi~~a~~ 86 (310)
++++|+|+.+++.
T Consensus 74 ~~~adiVvitag~ 86 (154)
T d1pzga1 74 LTGADCVIVTAGL 86 (154)
T ss_dssp HTTCSEEEECCSC
T ss_pred hcCCCeEEEeccc
Confidence 7899999999975
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=4.6e-05 Score=56.89 Aligned_cols=87 Identities=20% Similarity=0.184 Sum_probs=60.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH---HHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH---ESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~~~~~~~--~~d~ 79 (310)
.+|+|+||+|.+|..+++.+...|.+|++++++ +.+.+.++.+ |+..+ .|..+. +.+.++-. ++|+
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s-----~~k~~~~~~l---Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~ 100 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQV-INYREEDLVERLKEITGGKKVRV 100 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEeecccc-----hHHHHHHHhc---CCeEE-EECCCCCHHHHHHHHhCCCCeEE
Confidence 589999999999999999999999999999999 6666555544 44322 244443 34444433 5899
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+.+.+.. .....++.++..|
T Consensus 101 v~d~~g~~---~~~~~~~~l~~~G 121 (179)
T d1qora2 101 VYDSVGRD---TWERSLDCLQRRG 121 (179)
T ss_dssp EEECSCGG---GHHHHHHTEEEEE
T ss_pred EEeCccHH---HHHHHHHHHhcCC
Confidence 99998853 2344444444444
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.61 E-value=4.7e-05 Score=56.54 Aligned_cols=91 Identities=15% Similarity=0.248 Sum_probs=58.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH-HHHHHHhc--CCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH-ESLVNAIK--QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~~~~~~~--~~d~Vi 81 (310)
.+|||.||+|.+|+..++.+...|.+|++.+++ +.|.+.++.+ +...+. |..+. +....... ++|+|+
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s-----~~k~~~~~~l---Ga~~vi-~~~~~~~~~~~~~~~~gvD~vi 103 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRVL---GAKEVL-AREDVMAERIRPLDKQRWAAAV 103 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHHT---TCSEEE-ECC---------CCSCCEEEEE
T ss_pred CEEEEEeccchHHHHHHHHHHHcCCceEEecCc-----hHHHHHHHhc---ccceee-ecchhHHHHHHHhhccCcCEEE
Confidence 479999999999999999999999999999998 5555444443 433322 22221 22222222 699999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++.+.. .....++..+..| |++.
T Consensus 104 d~vgg~---~~~~~l~~l~~~G---riv~ 126 (176)
T d1xa0a2 104 DPVGGR---TLATVLSRMRYGG---AVAV 126 (176)
T ss_dssp ECSTTT---THHHHHHTEEEEE---EEEE
T ss_pred EcCCch---hHHHHHHHhCCCc---eEEE
Confidence 998854 2444455555444 5544
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.61 E-value=0.00012 Score=54.02 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=53.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
..+|+|+|+ |.+|...++.+...|.+|++++++ +.+.+..+++ |+ +++.. ..+.+..+...++.|+|+.
T Consensus 28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~-----~~k~~~a~~l---Ga~~~i~~-~~~~~~~~~~~~~~d~vi~ 97 (168)
T d1piwa2 28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS-----SRKREDAMKM---GADHYIAT-LEEGDWGEKYFDTFDLIVV 97 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEEEEG-GGTSCHHHHSCSCEEEEEE
T ss_pred CCEEEEECC-CCcchhHHHHhhhccccccccccc-----hhHHHHhhcc---CCcEEeec-cchHHHHHhhhcccceEEE
Confidence 368999985 999999999999999999999998 5566555554 44 33322 2233444555568999999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+.+..
T Consensus 98 ~~~~~ 102 (168)
T d1piwa2 98 CASSL 102 (168)
T ss_dssp CCSCS
T ss_pred EecCC
Confidence 87754
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.60 E-value=2.2e-05 Score=58.76 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=62.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC------cEEEEccCCCHHHHHHHhcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG------VNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~------~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|+|.|+| +|..|..++..|.++|++|++..|... + +..+.+...+ ...-..++.-.+++.++++++|
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~-----~-~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad 73 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD-----T-EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAE 73 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG-----H-HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc-----H-HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccc
Confidence 7999999 699999999999999999999998622 1 1222222211 1111111223456788899999
Q ss_pred EEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 79 VVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 79 ~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
+|+.+.+.. ....+++.....-+-+.++..+
T Consensus 74 ~Ii~avps~---~~~~~~~~l~~~l~~~~ii~~t 104 (180)
T d1txga2 74 VVLLGVSTD---GVLPVMSRILPYLKDQYIVLIS 104 (180)
T ss_dssp EEEECSCGG---GHHHHHHHHTTTCCSCEEEECC
T ss_pred hhhcccchh---hhHHHHHhhccccccceecccc
Confidence 999998854 4556665555442234444443
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.60 E-value=0.00028 Score=46.39 Aligned_cols=88 Identities=18% Similarity=0.181 Sum_probs=61.1
Q ss_pred CCCCceEEEEccCcchh-HHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 1 MASKSKILSIGGTGYIG-KFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG-~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
|..+++|.++| -|.+| +.+|+.|.++|++|.+.++..+ +..+.+...++.+..++- ++ -++++|.
T Consensus 5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~-------~~~~~L~~~Gi~v~~g~~--~~----~i~~~d~ 70 (96)
T d1p3da1 5 MRRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADG-------VVTQRLAQAGAKIYIGHA--EE----HIEGASV 70 (96)
T ss_dssp CTTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCS-------HHHHHHHHTTCEEEESCC--GG----GGTTCSE
T ss_pred chhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCC-------hhhhHHHHCCCeEEECCc--cc----cCCCCCE
Confidence 44578999999 46666 6689999999999999998733 123556667888776643 22 2357899
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
|+...+... ....+.+|++.| ++
T Consensus 71 vV~S~AI~~---~npel~~A~~~g-ip 93 (96)
T d1p3da1 71 VVVSSAIKD---DNPELVTSKQKR-IP 93 (96)
T ss_dssp EEECTTSCT---TCHHHHHHHHTT-CC
T ss_pred EEECCCcCC---CCHHHHHHHHcC-CC
Confidence 988877542 233455677776 54
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.56 E-value=5.3e-05 Score=54.90 Aligned_cols=68 Identities=24% Similarity=0.316 Sum_probs=49.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|||.++| +|.+|+++++.|++.|++|++..|+ +++.+.+.. ..++.+. . +..++++++|+||.+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~-----~~~~~~l~~--~~g~~~~----~---~~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAE--QLALPYA----M---SHQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHH--HHTCCBC----S---SHHHHHHTCSEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh-----HHhHHhhcc--ccceeee----c---hhhhhhhccceeeeec
Confidence 7899998 8999999999999999999999998 444432221 1233221 2 3445667899999998
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
.+.
T Consensus 66 kp~ 68 (152)
T d2ahra2 66 KPQ 68 (152)
T ss_dssp CGG
T ss_pred chH
Confidence 654
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.55 E-value=0.00014 Score=51.84 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=45.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhc-----CCcEEEEccCCCHHHHHHHhcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKN-----LGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
+||.|+|+ |.+|+.++..|+.++ .+++.++++.... +... ..+.+ .......+| . +.++++
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~---~g~a-~Dl~~~~~~~~~~~~~~~~---~----~~~~~a 69 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKA---IGEA-MDINHGLPFMGQMSLYAGD---Y----SDVKDC 69 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---C---CHHH-HHHTTSCCCTTCEEEC--C---G----GGGTTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCcc---ceee-eeeccCcccCCCeeEeeCc---H----HHhCCC
Confidence 58999996 999999999999998 3799999886543 1111 12222 112222222 2 247799
Q ss_pred CEEEEcccchh
Q 021596 78 DVVISTVGHAL 88 (310)
Q Consensus 78 d~Vi~~a~~~~ 88 (310)
|+|+.+++...
T Consensus 70 divvitag~~~ 80 (142)
T d1y6ja1 70 DVIVVTAGANR 80 (142)
T ss_dssp SEEEECCCC--
T ss_pred ceEEEeccccc
Confidence 99999998654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.55 E-value=4.7e-05 Score=56.99 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=51.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
+.||.|+||||++|+.+++.|.++. +++..+..+.+.. .+.. ....+.... +..........+.++|+||
T Consensus 5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~Dvvf 76 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAG--EQFGSVFPHLITQD------LPNLVAVKDADFSNVDAVF 76 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTT--SCHHHHCGGGTTSC------CCCCBCGGGCCGGGCSEEE
T ss_pred ccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCC--Cccccccccccccc------cccchhhhhhhhcccceee
Confidence 5789999999999999999999875 4666555332211 1111 111111111 1111111223356899999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+++... ...++....+. .+.++.
T Consensus 77 ~alp~~~---s~~~~~~l~~~--~~~v~~ 100 (183)
T d2cvoa1 77 CCLPHGT---TQEIIKGLPQE--LKIVDL 100 (183)
T ss_dssp ECCSSSH---HHHHHHTSCSS--CEEEEC
T ss_pred eccccch---HHHHHHHHHhc--Cccccc
Confidence 9988653 44444444333 344444
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.54 E-value=0.00022 Score=51.62 Aligned_cols=87 Identities=17% Similarity=0.282 Sum_probs=50.8
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCC---EEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHP---TFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
+|.|+||||++|+.+++.|.++.++ +..++.+.+.. +.+....-.....+..+ ..+.++|.++.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G--------~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~ 69 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG--------KSLKFKDQDITIEETTE-----TAFEGVDIALF 69 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTT--------CEEEETTEEEEEEECCT-----TTTTTCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccc--------ccccccCCcccccccch-----hhhhhhhhhhh
Confidence 7999999999999999999888653 33333221110 11111111222222222 23557899999
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+++.. .+......+.+.+ + ++|-
T Consensus 70 ~~~~~---~s~~~~~~~~~~~-~-~VID 92 (154)
T d2gz1a1 70 SAGSS---TSAKYAPYAVKAG-V-VVVD 92 (154)
T ss_dssp CSCHH---HHHHHHHHHHHTT-C-EEEE
T ss_pred ccCcc---chhhHHhhhcccc-c-eehh
Confidence 98854 3555666666666 3 4443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.52 E-value=0.00039 Score=48.60 Aligned_cols=86 Identities=20% Similarity=0.282 Sum_probs=64.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH-hcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA-IKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~-~~~~d~Vi~~ 83 (310)
+.|+|+| -|.+|+.+++.| +|++|.++..+ +.+. +.+...++.++.||.+|++.+.++ ++.++.++.+
T Consensus 1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d-----~~~~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLREL--RGSEVFVLAED-----ENVR---KKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTS--CGGGEEEEESC-----TTHH---HHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcc-----hHHH---HHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 4688888 699999999998 46778888877 4444 445567999999999999998876 3479999988
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
.... .....++..+++..
T Consensus 70 ~~~d--~~n~~~~~~~r~~~ 87 (129)
T d2fy8a1 70 LESD--SETIHCILGIRKID 87 (129)
T ss_dssp CSSH--HHHHHHHHHHHHHC
T ss_pred ccch--hhhHHHHHHHHHHC
Confidence 7754 33444555666653
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=0.00024 Score=52.27 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=55.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
.+|+|.|+ |.+|...++.+...|.++++++++ +++.+..+++ +...+ .|..+.+......+++|+||.++
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~-----~~~~~~a~~l---Gad~~-i~~~~~~~~~~~~~~~D~vid~~ 101 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKAL---GADEV-VNSRNADEMAAHLKSFDFILNTV 101 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred CEEEEecc-chHHHHHHHHhhcccccchhhccc-----hhHHHHHhcc---CCcEE-EECchhhHHHHhcCCCceeeeee
Confidence 58999985 889999999999999999899888 5555444444 43322 35666666666667899999999
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 102 g~~ 104 (168)
T d1uufa2 102 AAP 104 (168)
T ss_dssp SSC
T ss_pred ecc
Confidence 854
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.50 E-value=0.00032 Score=49.79 Aligned_cols=73 Identities=25% Similarity=0.291 Sum_probs=47.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhh----cCCcEEEEccCCCHHHHHHHhcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFK----NLGVNFVVGDVLNHESLVNAIKQVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~~~~~~~~~d 78 (310)
|||.|+|+ |.+|+.++..|+.++ .++..++++.... +....+... ........+|. +.++++|
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~---~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~ad 69 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA---EGDALDLIHGTPFTRRANIYAGDY-------ADLKGSD 69 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH---HHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc---cchhccccccccccccccccCCcH-------HHhcCCC
Confidence 78999996 999999999998888 4788888873211 111111110 12334444433 2367999
Q ss_pred EEEEcccchh
Q 021596 79 VVISTVGHAL 88 (310)
Q Consensus 79 ~Vi~~a~~~~ 88 (310)
+|+.+++...
T Consensus 70 ivvitag~~~ 79 (140)
T d1a5za1 70 VVIVAAGVPQ 79 (140)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeccccc
Confidence 9999998754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.49 E-value=3.4e-05 Score=56.01 Aligned_cols=67 Identities=16% Similarity=0.156 Sum_probs=47.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTV 84 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a 84 (310)
|||.|+| .|.+|+.+++.|+++||+|.+..|+.+ +.... ...+..+.. +..++++++|+||.+.
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~-----~~~~~---~~~~~~~~~-------~~~e~~~~~diIi~~v 64 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRS-----PSTIE---RARTVGVTE-------TSEEDVYSCPVVISAV 64 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCC-----HHHHH---HHHHHTCEE-------CCHHHHHTSSEEEECS
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchh-----HHHHH---hhhcccccc-------cHHHHHhhcCeEEEEe
Confidence 6899998 799999999999999999998887743 22111 111222211 2345678899999999
Q ss_pred cch
Q 021596 85 GHA 87 (310)
Q Consensus 85 ~~~ 87 (310)
+..
T Consensus 65 ~~~ 67 (152)
T d1i36a2 65 TPG 67 (152)
T ss_dssp CGG
T ss_pred cCc
Confidence 865
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.46 E-value=0.0003 Score=52.29 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=31.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|+++.|...
T Consensus 42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CceEEEec-cccccccceeeeecccccccccccccc
Confidence 47899999 799999999999999999999998854
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.43 E-value=0.00011 Score=52.46 Aligned_cols=87 Identities=16% Similarity=0.081 Sum_probs=56.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhH-hhh------cCCcEEEEccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLD-HFK------NLGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~-~l~------~~~~~~v~~D~~d~~~~~~~~~ 75 (310)
|||.|+|| |.+|+.++..|+..+ .++..++++.. +..... .+. .....+... .|. ++++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~-----~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~ 68 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEG-----IPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSS-----HHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccc-----cchhhhhhhhcccchhcccceEEec--CCH----HHhc
Confidence 68999996 999999999999998 58999998843 322111 111 123344322 222 2467
Q ss_pred CCCEEEEcccchh-------------hhhHHHHHHHHHHcC
Q 021596 76 QVDVVISTVGHAL-------------LADQVKIIAAIKEAG 103 (310)
Q Consensus 76 ~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~~ 103 (310)
++|+|+.++|... ....+.+++++.+.+
T Consensus 69 dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~ 109 (142)
T d1guza1 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS 109 (142)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999998643 233445566666554
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00041 Score=49.52 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=29.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~ 37 (310)
|++|.|+|+||.||...++-+.++. ++|.+++-+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 6799999999999999999998874 688888655
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.41 E-value=4e-05 Score=58.46 Aligned_cols=73 Identities=21% Similarity=0.254 Sum_probs=48.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC-------------CCHHHHH
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV-------------LNHESLV 71 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~-------------~d~~~~~ 71 (310)
|+|.|+| .|++|..++..|.+.||+|++++.+ ..+. +.+......+.+.++ .-..++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n-----~~~i---~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~ 71 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKI---DLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC-----HHHH---HHhcccCCcccchhhhhhhhhhhcccccccCCCHH
Confidence 7899997 8999999999999999999999987 3333 222221111111111 1112345
Q ss_pred HHhcCCCEEEEcccc
Q 021596 72 NAIKQVDVVISTVGH 86 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~ 86 (310)
++++++|+++.|.+.
T Consensus 72 ~~i~~~d~i~i~VpT 86 (202)
T d1mv8a2 72 KAVLDSDVSFICVGT 86 (202)
T ss_dssp HHHHTCSEEEECCCC
T ss_pred HHHhhCCEEEEecCc
Confidence 567789999999875
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.39 E-value=0.00033 Score=51.94 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=30.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|..|..+++.|++.||+|++.+|+
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~ 33 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRT 33 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECC
Confidence 7899998 8999999999999999999999998
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.37 E-value=0.00021 Score=51.12 Aligned_cols=75 Identities=28% Similarity=0.390 Sum_probs=47.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
+||.|+| .|.+|+.++..|+.+| .+++.++++.........+........ ...+...|. + .++++|+|
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~----~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---A----ALADADVV 73 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G----GGTTCSEE
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---H----HhccccEE
Confidence 7999999 5999999999999988 478888887321100001111111112 234444443 2 36799999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
+.++|..
T Consensus 74 VitaG~~ 80 (146)
T d1hyha1 74 ISTLGNI 80 (146)
T ss_dssp EECCSCG
T ss_pred EEecccc
Confidence 9999853
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=3.4e-05 Score=56.37 Aligned_cols=97 Identities=18% Similarity=0.171 Sum_probs=58.7
Q ss_pred CCceEEEEccCcchhHHHHHHHHhCC-CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 3 SKSKILSIGGTGYIGKFIVEASVKAG-HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 3 ~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
++++|+|.|++|..|+.+++.+.+.. .++.+. .|..+................++ .+..| +..+++.+|+|
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~-~~~~~------~~~~~~~~DVi 75 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV-TVQSS------LDAVKDDFDVF 75 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSC-CEESC------STTTTTSCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCc-eeecc------HHHHhcccceE
Confidence 36899999999999999999998864 666544 44432210000000000001111 12222 23456789999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
|....+ ..+...++.|.+.+ ++.++-
T Consensus 76 IDFs~p---~~~~~~~~~a~~~~-~~~ViG 101 (162)
T d1diha1 76 IDFTRP---EGTLNHLAFCRQHG-KGMVIG 101 (162)
T ss_dssp EECSCH---HHHHHHHHHHHHTT-CEEEEC
T ss_pred EEeccH---HHHHHHHHHHHhcc-ceeEEe
Confidence 998774 56788889999988 544444
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.36 E-value=3.7e-05 Score=56.67 Aligned_cols=85 Identities=19% Similarity=0.291 Sum_probs=56.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh-----cCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI-----KQVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~-----~~~d~ 79 (310)
..|||+||+|.+|...++.....|.+|++++|+ ++|.+.++.+ ++..+. |.. +...+.. +++|+
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~~~~l---Gad~vi-~~~--~~~~~~~~~~~~~gvd~ 93 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN-----REAADYLKQL---GASEVI-SRE--DVYDGTLKALSKQQWQG 93 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS-----SSTHHHHHHH---TCSEEE-EHH--HHCSSCCCSSCCCCEEE
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCceEEEecC-----HHHHHHHHhh---cccceE-ecc--chhchhhhcccCCCceE
Confidence 379999999999999999999999999999998 5566555554 433332 211 1111111 26899
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+++.+.. .....++.++..|
T Consensus 94 vid~vgg~---~~~~~~~~l~~~G 114 (167)
T d1tt7a2 94 AVDPVGGK---QLASLLSKIQYGG 114 (167)
T ss_dssp EEESCCTH---HHHHHHTTEEEEE
T ss_pred EEecCcHH---HHHHHHHHhccCc
Confidence 99998743 2334444444443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.36 E-value=0.0001 Score=54.53 Aligned_cols=92 Identities=11% Similarity=-0.012 Sum_probs=52.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-----C--CEEEEEcCCCCCCCchhhH-hHhhhcC---CcEEEEccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-----H--PTFVLVRESTLSAPSKSQL-LDHFKNL---GVNFVVGDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-----~--~V~~~~R~~~~~~~~~~~~-~~~l~~~---~~~~v~~D~~d~~~~~~ 72 (310)
..+|.|+||+|.||++++..|.+.. . .++.+..... ..+..- .-++... ....+..- . ...+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~---~~~l~g~~mdl~d~a~~~~~~~~~~-~---~~~~ 96 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS---FQALEGVAMELEDSLYPLLREVSIG-I---DPYE 96 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEE-S---CHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc---cchhcchhhhhcccccccccCcccc-c---cchh
Confidence 3489999999999999999998753 1 2334443311 111111 1112222 22222211 1 2345
Q ss_pred HhcCCCEEEEcccchh-------------hhhHHHHHHHHHHc
Q 021596 73 AIKQVDVVISTVGHAL-------------LADQVKIIAAIKEA 102 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~-------------~~~~~~~~~aa~~~ 102 (310)
+++++|+|+.++|... ....+.+.+++.+.
T Consensus 97 ~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 97 VFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 7889999999998754 33345566666664
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.35 E-value=0.00067 Score=49.80 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=51.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
|++|+|+| .|.+|..+++.|.+.|+ +|++.+|+ ++..+. ....+. ..+..+... .....+|.|
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-----~~~~~~---a~~~~~~~~~~~~~~~-----~~~~~~dlI 66 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISK---AVDLGIIDEGTTSIAK-----VEDFSPDFV 66 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHH---HHHTTSCSEEESCGGG-----GGGTCCSEE
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-----hHHHHH---HHHhhcchhhhhhhhh-----hhccccccc
Confidence 56899998 79999999999999996 57777777 333322 222332 122222211 112378999
Q ss_pred EEcccchhhhhHHHHHHHHHHc
Q 021596 81 ISTVGHALLADQVKIIAAIKEA 102 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~ 102 (310)
+.++++. ...++++.....
T Consensus 67 ila~p~~---~~~~vl~~l~~~ 85 (171)
T d2g5ca2 67 MLSSPVR---TFREIAKKLSYI 85 (171)
T ss_dssp EECSCHH---HHHHHHHHHHHH
T ss_pred cccCCch---hhhhhhhhhhcc
Confidence 9999854 455555555443
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.34 E-value=0.00016 Score=52.29 Aligned_cols=66 Identities=24% Similarity=0.370 Sum_probs=47.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|+|.++| +|.+|+++++.|++.| ++|++..|+ +++.+.+. +..++... .|... ++++|+||.+
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~-----~~~~~~l~--~~~~~~~~-~~~~~-------v~~~Div~la 64 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRG-----AEKRERLE--KELGVETS-ATLPE-------LHSDDVLILA 64 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSS-----HHHHHHHH--HHTCCEEE-SSCCC-------CCTTSEEEEC
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCC-----hhHHHHhh--hhcccccc-ccccc-------ccccceEEEe
Confidence 7899998 6999999999999888 899999998 44443222 12355443 22221 4578999998
Q ss_pred ccc
Q 021596 84 VGH 86 (310)
Q Consensus 84 a~~ 86 (310)
..+
T Consensus 65 vkP 67 (152)
T d1yqga2 65 VKP 67 (152)
T ss_dssp SCH
T ss_pred cCH
Confidence 764
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.32 E-value=5.5e-05 Score=54.91 Aligned_cols=80 Identities=14% Similarity=0.034 Sum_probs=46.7
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCC-------CEEEEEcCCCCCCCchhhHhHh-hhc---CCcEEEEccCCCHHHH
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGH-------PTFVLVRESTLSAPSKSQLLDH-FKN---LGVNFVVGDVLNHESL 70 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~-l~~---~~~~~v~~D~~d~~~~ 70 (310)
|.++||.|+||+|.+|++++..|.+.+- .++.+..+.. ..+.+.+.. +.. .....+..-- ..
T Consensus 1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~----~~ 73 (154)
T d5mdha1 1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLLKDVIATD----KE 73 (154)
T ss_dssp CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTEEEEEEES----CH
T ss_pred CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccc---hhhhhhhhhhhcccccccccccccCc----cc
Confidence 4578999999999999999999987541 2333433311 122221111 111 1222222211 12
Q ss_pred HHHhcCCCEEEEcccchh
Q 021596 71 VNAIKQVDVVISTVGHAL 88 (310)
Q Consensus 71 ~~~~~~~d~Vi~~a~~~~ 88 (310)
.++++++|+|+.++|...
T Consensus 74 ~~~~~~~dvVVitag~~~ 91 (154)
T d5mdha1 74 EIAFKDLDVAILVGSMPR 91 (154)
T ss_dssp HHHTTTCSEEEECCSCCC
T ss_pred ccccCCceEEEEecccCC
Confidence 356789999999998754
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.31 E-value=6.6e-05 Score=55.82 Aligned_cols=86 Identities=21% Similarity=0.271 Sum_probs=56.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi~ 82 (310)
.+|+|+||+|.+|+..++.....|.+|++++|+ ++|.+.++.+ +...+. |..+.+. .+.+. ..|.|++
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~-----~~k~~~~~~l---Gad~vi-~~~~~~~-~~~l~~~~~~~vvD 102 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL---GASRVL-PRDEFAE-SRPLEKQVWAGAID 102 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH---TEEEEE-EGGGSSS-CCSSCCCCEEEEEE
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecc-----hhHHHHHHhh---cccccc-ccccHHH-HHHHHhhcCCeeEE
Confidence 389999999999999999999999999999998 6666544444 544332 2222211 12222 3689999
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++.. .....++.++..|
T Consensus 103 ~Vgg~---~~~~~l~~l~~~G 120 (177)
T d1o89a2 103 TVGDK---VLAKVLAQMNYGG 120 (177)
T ss_dssp SSCHH---HHHHHHHTEEEEE
T ss_pred EcchH---HHHHHHHHhcccc
Confidence 88743 2334444444433
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.31 E-value=0.0013 Score=48.24 Aligned_cols=99 Identities=20% Similarity=0.248 Sum_probs=62.0
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHH-----------
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHE----------- 68 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~----------- 68 (310)
|+ +||.|-| -|.||+.+++.|+++. .+|+++.-..+ .... ..+...+...+..+.....
T Consensus 1 M~--irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~---~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (172)
T d2czca2 1 MK--VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP---DFEA---YRAKELGIPVYAASEEFIPRFEKEGFEVAG 71 (172)
T ss_dssp CC--EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC---SHHH---HHHHHTTCCEEESSGGGHHHHHHHTCCCSC
T ss_pred Cc--EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC---hHHH---HHhhhcCceeecccccceeeecccCccccc
Confidence 55 8999999 7999999999998875 56666653211 1122 2222334444443332222
Q ss_pred HHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 69 SLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 69 ~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.+..+++++|+|+-|+|.+. +..-++.-.++| +++++.|.
T Consensus 72 ~~~~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~k~Vi~s~ 111 (172)
T d2czca2 72 TLNDLLEKVDIIVDATPGGI---GAKNKPLYEKAG-VKAIFQGG 111 (172)
T ss_dssp BHHHHHTTCSEEEECCSTTH---HHHHHHHHHHHT-CEEEECTT
T ss_pred hhhhhhccCCEEEECCCCCC---CHHHHHHHHHcC-CCEEEECC
Confidence 34445668999999999764 444445556678 88887653
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.0015 Score=47.95 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=61.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHHHHHhc-----CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESLVNAIK-----QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~~~~~~-----~~ 77 (310)
.+|+|+|+ |.+|...++.+...|. +|++..++ +.+.+..+++ |+ .++..+-.+.....+.++ ++
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~-----~~rl~~a~~~---Ga~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS-----ATRLSKAKEI---GADLVLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT---TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CEEEEECC-CccHHHHHHHHHHcCCceEEeccCC-----HHHHHHHHHh---CCcccccccccccccccccccccCCCCc
Confidence 58999985 9999999999999997 69999988 6666555443 54 344455556655555443 68
Q ss_pred CEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 78 DVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 78 d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+||.++|... .....++.++..|
T Consensus 99 Dvvid~~G~~~--~~~~a~~~~~~gG 122 (171)
T d1pl8a2 99 EVTIECTGAEA--SIQAGIYATRSGG 122 (171)
T ss_dssp SEEEECSCCHH--HHHHHHHHSCTTC
T ss_pred eEEEeccCCch--hHHHHHHHhcCCC
Confidence 99999998642 2334455555444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.29 E-value=0.00087 Score=47.54 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=47.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHh-Hhhhc-----CCcEEEEccCCCHHHHHHHhcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLL-DHFKN-----LGVNFVVGDVLNHESLVNAIKQ 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~-~~l~~-----~~~~~v~~D~~d~~~~~~~~~~ 76 (310)
.||.|+|+ |.+|+.++..|+.+| .++..++++ +.+.+-. ..+.+ ....+...+ +.+ .+++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~~d 69 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA-----KERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----ICRD 69 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cccchhHHHHHHhccccCCCceeecCC--CHH----HhhC
Confidence 58999996 999999999999998 479998887 3332110 11222 223333322 222 3678
Q ss_pred CCEEEEcccchh
Q 021596 77 VDVVISTVGHAL 88 (310)
Q Consensus 77 ~d~Vi~~a~~~~ 88 (310)
+|+|+.++|...
T Consensus 70 aDvVVitaG~~~ 81 (143)
T d1llda1 70 ADMVVITAGPRQ 81 (143)
T ss_dssp CSEEEECCCCCC
T ss_pred CcEEEEeccccc
Confidence 999999998754
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.29 E-value=0.00013 Score=51.91 Aligned_cols=71 Identities=14% Similarity=0.087 Sum_probs=47.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhH-hHhhh------cCCcEEEE-ccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQL-LDHFK------NLGVNFVV-GDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-~~~l~------~~~~~~v~-~D~~d~~~~~~~~ 74 (310)
|||.|+|+ |.+|+.++..|+.+| .++.+++++ +++.+- ...+. .....+.. .|. + .+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~----~~ 67 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LL 67 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G----GG
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecc-----cchhhHHHHHHhhhccccCCCCccccCCCH---H----Hh
Confidence 79999995 999999999999888 479999887 333211 01111 11223332 233 2 47
Q ss_pred cCCCEEEEcccchh
Q 021596 75 KQVDVVISTVGHAL 88 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~ 88 (310)
+++|+|+.+++...
T Consensus 68 ~~adiVvitag~~~ 81 (142)
T d1ojua1 68 KGSEIIVVTAGLAR 81 (142)
T ss_dssp TTCSEEEECCCCCC
T ss_pred ccccEEEEeccccC
Confidence 79999999998543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.25 E-value=0.00076 Score=48.75 Aligned_cols=89 Identities=15% Similarity=0.248 Sum_probs=69.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
..+|+|+| .|..|..-++.....|..|++++++ .++.+.++......++.. ..+.+.+.+.++.+|+||.+
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~-----~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCc-----HHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 45999999 6999999999999999999999998 556655555544455554 34778899999999999999
Q ss_pred ccchh----hhhHHHHHHHHHH
Q 021596 84 VGHAL----LADQVKIIAAIKE 101 (310)
Q Consensus 84 a~~~~----~~~~~~~~~aa~~ 101 (310)
+-... ...++.+++.++.
T Consensus 103 alipG~~aP~lIt~~mv~~Mk~ 124 (168)
T d1pjca1 103 VLVPGRRAPILVPASLVEQMRT 124 (168)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCT
T ss_pred eecCCcccCeeecHHHHhhcCC
Confidence 86554 4556677777665
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=97.24 E-value=0.00058 Score=50.18 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=27.2
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRE 37 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (310)
|+ ++||.|.| +|++|+..++.|.+.. .+++++...
T Consensus 1 M~-kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~ 36 (170)
T d1f06a1 1 MT-NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSR 36 (170)
T ss_dssp CC-CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred CC-cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEec
Confidence 66 47899998 7999999999998763 676655433
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.22 E-value=0.00035 Score=52.04 Aligned_cols=88 Identities=16% Similarity=0.277 Sum_probs=58.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHHHH----HHHhc--C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHESL----VNAIK--Q 76 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~~----~~~~~--~ 76 (310)
.+|+|+|+ |.+|...++.+...|. +|++++++ +++.+..+++ |. .++...-.+..+. .+... +
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~-----~~~~~~a~~l---Ga~~vi~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS-----PNRLKLAEEI---GADLTLNRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CEEEEECC-Cccchhheecccccccccccccccc-----cccccccccc---cceEEEeccccchHHHHHHHHHhhCCCC
Confidence 58999996 8999999999999996 79999998 6666555544 44 3343322333322 22222 5
Q ss_pred CCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 77 VDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 77 ~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+|+||.++|... .....++.++..|
T Consensus 101 ~Dvvid~vG~~~--~~~~a~~~l~~~G 125 (182)
T d1vj0a2 101 ADFILEATGDSR--ALLEGSELLRRGG 125 (182)
T ss_dssp EEEEEECSSCTT--HHHHHHHHEEEEE
T ss_pred ceEEeecCCchh--HHHHHHHHhcCCC
Confidence 899999998642 2344555555544
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.21 E-value=0.00019 Score=52.88 Aligned_cols=72 Identities=22% Similarity=0.292 Sum_probs=48.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHh-hhc-CCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDH-FKN-LGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.++|+|+| +|..|++++..|.+.+.+|+++.|+ .++.+.+.. +.. ..+.....|-. .+..+|+||
T Consensus 18 ~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~-----~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiI 84 (171)
T d1p77a1 18 NQHVLILG-AGGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVI 84 (171)
T ss_dssp TCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEE
T ss_pred CCEEEEEC-CcHHHHHHHHHHcccCceeeeccch-----HHHHHHHHHHHhhccccchhhhccc-------cccccceee
Confidence 46899998 6888999999999877899999999 444433322 222 23344443322 145799999
Q ss_pred Ecccchh
Q 021596 82 STVGHAL 88 (310)
Q Consensus 82 ~~a~~~~ 88 (310)
++++...
T Consensus 85 N~tp~g~ 91 (171)
T d1p77a1 85 NATSAGL 91 (171)
T ss_dssp ECCCC--
T ss_pred ecccccc
Confidence 9988653
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00083 Score=51.56 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=53.2
Q ss_pred CceEEEEcc----------------CcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH
Q 021596 4 KSKILSIGG----------------TGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH 67 (310)
Q Consensus 4 ~~~IlI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 67 (310)
.++||||+| ||..|.+|++.+..+|++|++++-..+.. .+.++..+.. .+.
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~~~~--~t~ 72 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------TPPFVKRVDV--MTA 72 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------CCTTEEEEEC--CSH
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-----------ccccccccee--hhh
Confidence 478888876 79999999999999999999998764432 1345666654 344
Q ss_pred HHHH----HHhcCCCEEEEcccchh
Q 021596 68 ESLV----NAIKQVDVVISTVGHAL 88 (310)
Q Consensus 68 ~~~~----~~~~~~d~Vi~~a~~~~ 88 (310)
+++. +.++++|++|++|+...
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHhhhccceeEeeeechhh
Confidence 4443 44458999999998765
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.17 E-value=0.0012 Score=47.65 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=47.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhhHhHhhhc----CC-cEEE-EccCCCHHHHHHHhc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQLLDHFKN----LG-VNFV-VGDVLNHESLVNAIK 75 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~l~~----~~-~~~v-~~D~~d~~~~~~~~~ 75 (310)
.+||.|+|+ |.+|+.++..|..+|. ++..++++.+.. +.+. ..+.+ .+ ...+ .+|. + .++
T Consensus 20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a---~g~a-lDl~h~~~~~~~~~~~~~~d~---~----~~~ 87 (160)
T d1i0za1 20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL---KGEM-MDLQHGSLFLQTPKIVADKDY---S----VTA 87 (160)
T ss_dssp SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH---HHHH-HHHHHTGGGCCCSEEEECSSG---G----GGT
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh---HHHH-HHHhccccccCCCeEEeccch---h----hcc
Confidence 369999995 9999999999999994 788898873221 1111 11221 11 2222 2333 2 367
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|+.++|...
T Consensus 88 ~adiVVitAg~~~ 100 (160)
T d1i0za1 88 NSKIVVVTAGVRQ 100 (160)
T ss_dssp TCSEEEECCSCCC
T ss_pred cccEEEEecCCcc
Confidence 9999999998754
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.15 E-value=0.002 Score=44.94 Aligned_cols=30 Identities=20% Similarity=0.280 Sum_probs=24.4
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-CCEEEEE
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-HPTFVLV 35 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~ 35 (310)
||.|.|++|..|+.+++.+.+.. +++.+..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 79999999999999999887754 6665443
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.11 E-value=0.00086 Score=46.65 Aligned_cols=83 Identities=16% Similarity=0.118 Sum_probs=58.0
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.++|+|+||| +..|..+.+.|.+.| ++|+.+..+... -.|... .-++.| +-..+|.
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-------------i~G~~~-y~sl~d------lp~~vDl 67 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-------------VQGVKA-YKSVKD------IPDEIDL 67 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-------------ETTEEC-BSSTTS------CSSCCSE
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-------------cCCeEe-ecchhh------cCCCCce
Confidence 5799999999 899999999998766 678877654211 112221 123333 2347999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 80 VISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
++.+.+. .....+++.|.+.| ++.++.
T Consensus 68 vvi~vp~---~~~~~~~~~~~~~g-~~~~vi 94 (129)
T d2csua1 68 AIIVVPK---RFVKDTLIQCGEKG-VKGVVI 94 (129)
T ss_dssp EEECSCH---HHHHHHHHHHHHHT-CCEEEE
T ss_pred EEEecCh---HHhHHHHHHHHHcC-CCEEEE
Confidence 9998884 45777889999999 887554
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.09 E-value=0.00091 Score=43.08 Aligned_cols=84 Identities=21% Similarity=0.201 Sum_probs=60.2
Q ss_pred ceEEEEccCcchhH-HHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 5 SKILSIGGTGYIGK-FIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 5 ~~IlI~GatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
|+|-++|- |.+|. .|++.|.++|+.|.+.++..+ +..+.|+..|+.+..+. +++. ++++|.|+..
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~-------~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~S 67 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET-------ERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKT 67 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC-------HHHHHHHHTTCCEESSC--CTTS----CCCCSEEEEC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC-------hhHHHHHHCCCeEEeee--cccc----cCCCCEEEEe
Confidence 78999984 55665 689999999999999998732 23466788898876652 2222 3579999998
Q ss_pred ccchhhhhHHHHHHHHHHcCCcc
Q 021596 84 VGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
.+... ....+.+|++.| ++
T Consensus 68 sAI~~---~npel~~A~~~g-Ip 86 (89)
T d1j6ua1 68 PAVRD---DNPEIVRARMER-VP 86 (89)
T ss_dssp TTCCT---TCHHHHHHHHTT-CC
T ss_pred cCcCC---CCHHHHHHHHcC-CC
Confidence 87542 334577788877 64
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=97.04 E-value=0.00042 Score=52.14 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=30.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+.++..
T Consensus 43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~ 76 (197)
T d1j4aa1 43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFR 76 (197)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCeEEEec-ccccchhHHHhHhhhcccccccCccc
Confidence 47999999 89999999999999999999988763
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=97.01 E-value=0.0034 Score=44.55 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=29.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~ 37 (310)
|++|.|+|+||.||....+-+.+.. ++|.+++-+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 6899999999999999999998763 788888665
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=97.00 E-value=0.00079 Score=48.60 Aligned_cols=77 Identities=21% Similarity=0.279 Sum_probs=46.4
Q ss_pred CCCCceEEEEccCcchhHHH-HHHHHhCC-CCEEEEE-cCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh--c
Q 021596 1 MASKSKILSIGGTGYIGKFI-VEASVKAG-HPTFVLV-RESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI--K 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l-~~~L~~~g-~~V~~~~-R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~--~ 75 (310)
|++++||.|+| +|.+|+.+ .+.|.+.. .+++++. |+... ... ......++.+... +.+++.+.. .
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~---~~~---~~a~~~~i~~~~~---~~d~l~~~~~~~ 70 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS---DGL---ARAQRMGVTTTYA---GVEGLIKLPEFA 70 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC---HHH---HHHHHTTCCEESS---HHHHHHHSGGGG
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc---cch---hhhhhcCCccccc---ceeeeeeccccc
Confidence 88888999999 89999865 45554443 4677764 54221 111 1112335444332 345555443 4
Q ss_pred CCCEEEEcccch
Q 021596 76 QVDVVISTVGHA 87 (310)
Q Consensus 76 ~~d~Vi~~a~~~ 87 (310)
++|+||.+++..
T Consensus 71 ~iDiVf~ATpag 82 (157)
T d1nvmb1 71 DIDFVFDATSAS 82 (157)
T ss_dssp GEEEEEECSCHH
T ss_pred ccCEEEEcCCch
Confidence 799999987754
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.98 E-value=0.00099 Score=50.20 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=31.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|++.++...
T Consensus 45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ceeeeeee-cccccccccccccccceeeeccCCccc
Confidence 37899999 899999999999999999999998754
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.94 E-value=0.0025 Score=45.04 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=46.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhH-hHhh------hcCCcEEE-EccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQL-LDHF------KNLGVNFV-VGDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~-~~~l------~~~~~~~v-~~D~~d~~~~~~~~~ 75 (310)
+||.|+|+ |.+|+.++..|..++ .++..++.+.. +... ...+ ......+. ..|.. .++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~-----~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-------~~~ 68 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEG-----VPQGKALDLYEASPIEGFDVRVTGTNNYA-------DTA 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSS-----HHHHHHHHHHTTHHHHTCCCCEEEESCGG-------GGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccc-----cchhHHHHhhccccccCCCCEEEecCcHH-------Hhc
Confidence 68999995 999999999998887 47888887733 2211 1111 11223333 23332 256
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|+.++|...
T Consensus 69 ~advvvitag~~~ 81 (142)
T d1uxja1 69 NSDVIVVTSGAPR 81 (142)
T ss_dssp TCSEEEECCSCC-
T ss_pred CCCEEEEeeeccC
Confidence 8999999998643
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.90 E-value=0.0018 Score=47.31 Aligned_cols=75 Identities=13% Similarity=0.194 Sum_probs=52.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCH-HHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNH-ESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~-~~~~~~~~--~~d~ 79 (310)
.+|+|+|++|.+|...++.+...| .+|+++.++ +.+.+..+++ ++ .++..+-.|. +.+.+... ++|+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~-----~~~~~~~~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~~d~ 100 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYVINASMQDPLAEIRRITESKGVDA 100 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEEeccccceeeeeecccccccccccccccc-----hhhHHHHHHc---CCceeeccCCcCHHHHHHHHhhcccchh
Confidence 589999999999999999999999 478888888 5566555544 43 4444433332 33333332 5899
Q ss_pred EEEcccch
Q 021596 80 VISTVGHA 87 (310)
Q Consensus 80 Vi~~a~~~ 87 (310)
||.+++..
T Consensus 101 vid~~g~~ 108 (170)
T d1jvba2 101 VIDLNNSE 108 (170)
T ss_dssp EEESCCCH
T ss_pred hhcccccc
Confidence 99998854
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.0009 Score=49.98 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=31.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+.++...
T Consensus 44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 44 GKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence 46899998 899999999999999999999998744
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.90 E-value=0.0021 Score=47.82 Aligned_cols=75 Identities=23% Similarity=0.203 Sum_probs=46.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEE-EEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCHH-HHHHHhc-CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFV-LVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNHE-SLVNAIK-QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~-~~~~~~~-~~d~V 80 (310)
.+|||+||+|.+|+..++.+...|.++++ ++++ +++.. ......+. .++...-.+.. .+.++.. ++|+|
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-----~e~~~--~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv 104 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-----QEKCL--FLTSELGFDAAVNYKTGNVAEQLREACPGGVDVY 104 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-----HHHHH--HHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccch-----HHHHh--hhhhcccceEEeeccchhHHHHHHHHhccCceEE
Confidence 57999999999999999999999976554 4544 22221 11122343 33333323333 3333332 79999
Q ss_pred EEcccc
Q 021596 81 ISTVGH 86 (310)
Q Consensus 81 i~~a~~ 86 (310)
|++.|.
T Consensus 105 ~D~vGg 110 (187)
T d1vj1a2 105 FDNVGG 110 (187)
T ss_dssp EESSCH
T ss_pred EecCCc
Confidence 999983
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.90 E-value=0.00083 Score=49.51 Aligned_cols=88 Identities=17% Similarity=0.234 Sum_probs=58.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCC-HHHHHHHhc--CCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLN-HESLVNAIK--QVDV 79 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d-~~~~~~~~~--~~d~ 79 (310)
.+|+|+|+ |.+|...++.+...|. +|++++++ +.|.+..+.+ |+ +++...-.+ .+.+.+... ++|+
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~-----~~r~~~a~~l---Ga~~~i~~~~~~~~~~v~~~t~g~G~D~ 99 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR-----PICVEAAKFY---GATDILNYKNGHIEDQVMKLTNGKGVDR 99 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC-----HHHHHHHHHH---TCSEEECGGGSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEEcC-Ccchhhhhhhhhcccccccccccch-----hhhHHHHHhh---CccccccccchhHHHHHHHHhhccCcce
Confidence 58999985 9999999999999995 79999988 6666555544 43 333322122 344555554 5999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
||.+++... .....++.++..|
T Consensus 100 vid~~g~~~--~~~~a~~~~~~~G 121 (174)
T d1jqba2 100 VIMAGGGSE--TLSQAVKMVKPGG 121 (174)
T ss_dssp EEECSSCTT--HHHHHHHHEEEEE
T ss_pred EEEccCCHH--HHHHHHHHHhcCC
Confidence 999998643 2334455555544
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.90 E-value=0.0012 Score=44.99 Aligned_cols=82 Identities=20% Similarity=0.267 Sum_probs=57.9
Q ss_pred ceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
++|+|+|+| +..|..+++.|++.||+|+.+..+... -.|...+ .++.++-..+|.++
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~-------------i~G~~~y-------~sl~~lp~~~D~vv 61 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE-------------IEGLKCY-------RSVRELPKDVDVIV 61 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------------ETTEECB-------SSGGGSCTTCCEEE
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc-------------ccCcccc-------ccchhccccceEEE
Confidence 689999998 679999999999999998877543110 1122221 12223334789999
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
.+.+. .....+++.|.+.| ++.+++
T Consensus 62 i~vp~---~~~~~~l~~~~~~g-~k~v~~ 86 (116)
T d1y81a1 62 FVVPP---KVGLQVAKEAVEAG-FKKLWF 86 (116)
T ss_dssp ECSCH---HHHHHHHHHHHHTT-CCEEEE
T ss_pred EEeCH---HHHHHHHHHHHhcC-CceEEe
Confidence 88874 45778888888888 888765
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.83 E-value=0.0063 Score=43.28 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=46.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhH-----hhhcCCcEEEEccCCCHHHHHHHhcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLD-----HFKNLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~-----~l~~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
.+||.|+|+ |.+|+.++..|..++ .++.+++++.... +....+ .+......+...+ +. +.++++
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~---~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~a 72 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP---HGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGA 72 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH---HHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcc---eeeecchhhhccccCCCcEEEecc--cc----cccCCC
Confidence 469999995 999999998888877 5788888874321 111111 1111223333322 22 236799
Q ss_pred CEEEEcccch
Q 021596 78 DVVISTVGHA 87 (310)
Q Consensus 78 d~Vi~~a~~~ 87 (310)
|+|+.+++..
T Consensus 73 dvvvitag~~ 82 (150)
T d1t2da1 73 DVVIVTAGFT 82 (150)
T ss_dssp SEEEECCSCS
T ss_pred cEEEEecccc
Confidence 9999999853
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.82 E-value=0.00046 Score=51.75 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+.++..+
T Consensus 49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CceEEEec-cccccccceeeeeccccceeeccCccc
Confidence 36899998 899999999999999999999988754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.78 E-value=0.0015 Score=45.95 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=59.4
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++|+|+||| +..|..+++.|.+.||+|+.+..+... -.|... +. ++.++-..+|.|
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~-------------i~G~~~----~~---sl~dlp~~iD~v 78 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-------------VLGRKC----YP---SVLDIPDKIEVV 78 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------------ETTEEC----BS---SGGGCSSCCSEE
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc-------------cCCCcc----cc---cccccCccceEE
Confidence 4689999998 789999999999999998877654210 112211 11 222333468999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
+.+.+. .....+++.|.+.| ++.+++
T Consensus 79 ~i~vp~---~~~~~~~~e~~~~g-~k~v~~ 104 (139)
T d2d59a1 79 DLFVKP---KLTMEYVEQAIKKG-AKVVWF 104 (139)
T ss_dssp EECSCH---HHHHHHHHHHHHHT-CSEEEE
T ss_pred EEEeCH---HHHHHHHHHHHHhC-CCEEEE
Confidence 998885 45778888888888 888776
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.75 E-value=0.0015 Score=47.09 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=46.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCCCCCCCchhh-HhHhhhc------CCcEEEEccCCCHHHHHHHhc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRESTLSAPSKSQ-LLDHFKN------LGVNFVVGDVLNHESLVNAIK 75 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~-~~~~l~~------~~~~~v~~D~~d~~~~~~~~~ 75 (310)
.||.|+|+ |.+|+.++..|..+|. ++..++++. .+.. ....+.+ ........|. + .++
T Consensus 20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~-----~~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~~ 86 (159)
T d2ldxa1 20 CKITVVGV-GDVGMACAISILLKGLADELALVDADT-----DKLRGEALDLQHGSLFLSTPKIVFGKDY---N----VSA 86 (159)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCH-----HHHHHHHHHHHHTTTTCSCCEEEEESSG---G----GGT
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc-----hhhhccHHHHhCcchhcCCCeEEeccch---h----hhc
Confidence 58999995 9999999999999984 799988873 2221 1111221 1122223333 2 357
Q ss_pred CCCEEEEcccchh
Q 021596 76 QVDVVISTVGHAL 88 (310)
Q Consensus 76 ~~d~Vi~~a~~~~ 88 (310)
++|+|+.++|...
T Consensus 87 ~adivvitag~~~ 99 (159)
T d2ldxa1 87 NSKLVIITAGARM 99 (159)
T ss_dssp TEEEEEECCSCCC
T ss_pred cccEEEEeccccc
Confidence 8999999998644
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=96.69 E-value=0.0066 Score=44.21 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=56.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCH-----------HHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNH-----------ESLV 71 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-----------~~~~ 71 (310)
|++|.|-| -|.||+.+++.|.+++ .+|+++.-..+ ...... +...+........... ....
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~---~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~ 73 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRP---DFEARM---ALKKGYDLYVAIPERVKLFEKAGIEVAGTVD 73 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSC---SHHHHH---HHHTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCc---HHHHHH---HHhcCCceEecccccceeecccCcccCCChh
Confidence 66999998 8999999999998887 56666643321 111111 1122222222211111 1234
Q ss_pred HHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 72 NAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
.+++++|+|+-|.|.+. +..-++.-.++| +|.++.+
T Consensus 74 ~~~~~vDvViEcTG~f~---~~~~~~~hl~~G-~K~vi~~ 109 (171)
T d1cf2o1 74 DMLDEADIVIDCTPEGI---GAKNLKMYKEKG-IKAIFQG 109 (171)
T ss_dssp HHHHTCSEEEECCSTTH---HHHHHHHHHHTT-CEEEECT
T ss_pred HhhcCCCEEEEccCCCC---CHHHHHHHHHcC-CCEEEEC
Confidence 45679999999999764 323344445668 7766543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.62 E-value=0.0037 Score=45.49 Aligned_cols=67 Identities=19% Similarity=0.348 Sum_probs=46.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~ 82 (310)
.++|+|+| +|..|++++..|.+.|. +|.++.|+ .++.+.+... .+...+. ++. ...+|+||+
T Consensus 17 ~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~-----~~ka~~L~~~--~~~~~~~-~~~--------~~~~DliIN 79 (167)
T d1npya1 17 NAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARN-----VKTGQYLAAL--YGYAYIN-SLE--------NQQADILVN 79 (167)
T ss_dssp TSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSC-----HHHHHHHHHH--HTCEEES-CCT--------TCCCSEEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeccc-----HHHHHHHHHh--hhhhhhh-ccc--------ccchhhhee
Confidence 47899999 69999999999999995 79999998 5455333222 1222221 111 136899999
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
+++..
T Consensus 80 aTpiG 84 (167)
T d1npya1 80 VTSIG 84 (167)
T ss_dssp CSSTT
T ss_pred ccccC
Confidence 87743
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.59 E-value=0.0043 Score=45.55 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=55.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE----------ccCCCHHHHHH
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV----------GDVLNHESLVN 72 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~----------~D~~d~~~~~~ 72 (310)
|-||.|-| .|.||+.+++.|.+++ .+|+++....+. ... ..+...+..... ..+.-...+..
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~ 73 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPN---YEA---FIAHRRGIRIYVPQQSIKKFEESGIPVAGTVED 73 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCS---HHH---HHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHH
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCc---HHH---HHhcccCcceeccCccceeccccceecCCchhh
Confidence 45999998 8999999999999876 577777544221 111 111111111111 00111112344
Q ss_pred HhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 73 AIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 73 ~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
++.++|+|+.|+|.+. +..-++...+.| .|.++
T Consensus 74 ~~~~vDiViecTG~f~---~~e~a~~hl~~G-~KvIi 106 (178)
T d1b7go1 74 LIKTSDIVVDTTPNGV---GAQYKPIYLQLQ-RNAIF 106 (178)
T ss_dssp HHHHCSEEEECCSTTH---HHHHHHHHHHTT-CEEEE
T ss_pred hhhcCCEEEECCCCcC---CHHHHHHHHHcC-CEEEE
Confidence 5568999999999753 334455555667 55554
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.59 E-value=0.00088 Score=41.76 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=31.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
||+|.|+| +|.+|+-++..-.+.|++|++++-+..
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 57999999 799999999999999999999997743
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.55 E-value=0.0033 Score=45.99 Aligned_cols=88 Identities=16% Similarity=0.279 Sum_probs=61.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC--------------------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV-------------------- 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~-------------------- 64 (310)
-+|+|+| .|-.|.+-++.....|..|++++.+ +.+.+ .++..+..++..+.
T Consensus 30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~-----~~~~~---~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~ 100 (183)
T d1l7da1 30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVR-----AATKE---QVESLGGKFITVDDEAMKTAETAGGYAKEMGEEF 100 (183)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----STTHH---HHHHTTCEECCC----------------------
T ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEecc-----HHHHH---HHHHhhcceEEEeccccccccccccchhhcCHHH
Confidence 4899999 5999999999999999999999998 44443 33333444433222
Q ss_pred --CCHHHHHHHhcCCCEEEEcccchh----hhhHHHHHHHHHH
Q 021596 65 --LNHESLVNAIKQVDVVISTVGHAL----LADQVKIIAAIKE 101 (310)
Q Consensus 65 --~d~~~~~~~~~~~d~Vi~~a~~~~----~~~~~~~~~aa~~ 101 (310)
...+.+.+.+..+|+||-++-... ...+..+++.++.
T Consensus 101 ~~~~~~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~ 143 (183)
T d1l7da1 101 RKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKP 143 (183)
T ss_dssp -CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCT
T ss_pred HHHHHHHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCC
Confidence 124556677889999999886544 4456666666654
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.54 E-value=0.0046 Score=44.86 Aligned_cols=75 Identities=17% Similarity=0.120 Sum_probs=50.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCC-HHHHHHHhcCCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLN-HESLVNAIKQVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d-~~~~~~~~~~~d~Vi 81 (310)
..+|+|.|+ |.+|...++.+...|.+|++++++ +.+.+..+++ +. +++..+-.| .+.+.+...+.+.++
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~-----~~~~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~g~~~~i 98 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDID-----DAKLELARKL---GASLTVNARQEDPVEAIQRDIGGAHGVL 98 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCEEEEeec-cccHHHHHHHHHHcCCccceecch-----hhHHHhhhcc---CccccccccchhHHHHHHHhhcCCcccc
Confidence 358999985 999999999999999999999998 5566444443 43 344332222 334444445667666
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
.+++..
T Consensus 99 ~~~~~~ 104 (166)
T d1llua2 99 VTAVSN 104 (166)
T ss_dssp ECCSCH
T ss_pred cccccc
Confidence 666543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.54 E-value=0.004 Score=46.27 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=31.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+.+|...
T Consensus 44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d2naca1 44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL 78 (188)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred ccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence 46899998 899999999999999999999998743
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.51 E-value=0.0024 Score=46.90 Aligned_cols=74 Identities=18% Similarity=0.195 Sum_probs=50.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE--ccCCC-HHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV--GDVLN-HESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~--~D~~d-~~~~~~~~~--~~d 78 (310)
.+|+|.|+ |.+|...+..+...| .+|++++++ ++|.+..+++ +...+. .+-.+ .+....... ++|
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D 100 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN-----KDKFAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVD 100 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCc-----HHHHHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence 58999998 669999999999998 578888888 5566444433 433322 23222 233333333 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||.+.+..
T Consensus 101 ~vid~~G~~ 109 (176)
T d2jhfa2 101 FSFEVIGRL 109 (176)
T ss_dssp EEEECSCCH
T ss_pred EEEecCCch
Confidence 999999865
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.49 E-value=0.0038 Score=46.21 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=30.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.+++.|+| .|.||+.+++.+..-|.+|.+.+|..
T Consensus 44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~ 77 (184)
T d1ygya1 44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYV 77 (184)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred ceeeeecc-ccchhHHHHHHhhhccceEEeecCCC
Confidence 46889998 79999999999999899999998874
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.41 E-value=0.0056 Score=45.54 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=30.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|.|+| .|.||+.+++.|..-|.+|.+.++...
T Consensus 47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred ccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence 37899998 799999999999999999999887643
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.37 E-value=0.0068 Score=44.33 Aligned_cols=74 Identities=15% Similarity=0.268 Sum_probs=49.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEE-EEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCCCH-HHHHHHhc-CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTF-VLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVLNH-ESLVNAIK-QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~-~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~-~~~~~~~~-~~d~V 80 (310)
.+|+|+|+ |.+|...++.+...|.+++ +..++ +.|.+..+++ ++ +++..+-.|. +.+.++.. ++|+|
T Consensus 30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~i~~~t~gg~D~v 100 (174)
T d1f8fa2 30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV-----ESRLELAKQL---GATHVINSKTQDPVAAIKEITDGGVNFA 100 (174)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CEEEEeCC-CHHHhhhhhcccccccceeeeeccH-----HHHHHHHHHc---CCeEEEeCCCcCHHHHHHHHcCCCCcEE
Confidence 58999986 9999999999999997654 55665 5566555554 43 4544333332 23333333 59999
Q ss_pred EEcccch
Q 021596 81 ISTVGHA 87 (310)
Q Consensus 81 i~~a~~~ 87 (310)
|.+++..
T Consensus 101 id~~G~~ 107 (174)
T d1f8fa2 101 LESTGSP 107 (174)
T ss_dssp EECSCCH
T ss_pred EEcCCcH
Confidence 9999864
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.35 E-value=0.0052 Score=44.86 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=50.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
.+|+|.| +|.+|...++.+...|. .|++.+++ +.|.+..+.+ ...+++..+-.+.+...+... ++|+||
T Consensus 34 ~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~-----~~k~~~~~~~--ga~~~i~~~~~~~~~~~~~~~~~g~d~vi 105 (172)
T d1h2ba2 34 AYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVK-----EEKLKLAERL--GADHVVDARRDPVKQVMELTRGRGVNVAM 105 (172)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHHHHHHT--TCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeC-CChHHHHHHHHHHhhcCcccccccch-----hHHHHHHhhc--ccceeecCcccHHHHHHHhhCCCCceEEE
Confidence 5789988 59999999999988885 56677777 5566544443 123555444333444444433 689999
Q ss_pred Ecccch
Q 021596 82 STVGHA 87 (310)
Q Consensus 82 ~~a~~~ 87 (310)
.+++..
T Consensus 106 d~~g~~ 111 (172)
T d1h2ba2 106 DFVGSQ 111 (172)
T ss_dssp ESSCCH
T ss_pred EecCcc
Confidence 999865
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.32 E-value=0.0046 Score=45.33 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=50.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEccCC--CHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGDVL--NHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~--d~~~~~~~~~--~~d 78 (310)
.+|+|+| .|.+|...++.+...|. +|++..++ +.|.+..+++ +. .++...-. ....+..... ++|
T Consensus 30 ~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~-----~~r~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~d 100 (174)
T d1e3ia2 30 STCAVFG-LGCVGLSAIIGCKIAGASRIIAIDIN-----GEKFPKAKAL---GATDCLNPRELDKPVQDVITELTAGGVD 100 (174)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEEC-CChHHHHHHHHHHHhCCceeeeeccc-----hHHHHHHHHh---CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence 5899998 69999999999999997 57777887 5566555554 43 33332211 2233333333 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||.++|..
T Consensus 101 ~vie~~G~~ 109 (174)
T d1e3ia2 101 YSLDCAGTA 109 (174)
T ss_dssp EEEESSCCH
T ss_pred EEEEecccc
Confidence 999999865
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.31 E-value=0.0039 Score=45.67 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=47.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEcc--CCCHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGD--VLNHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D--~~d~~~~~~~~~--~~d 78 (310)
.+|+|.|+ |.+|...++.+...|.. |++.+++ +.+.+..+++ |+. ++..+ -.+......... ++|
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-----~~k~~~ak~l---Ga~~~i~~~~~~~~~~~~~~~~~~~g~D 100 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-----KDKFARAKEF---GATECINPQDFSKPIQEVLIEMTDGGVD 100 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-----HHHHHHHHHh---CCcEEEeCCchhhHHHHHHHHHcCCCCc
Confidence 58999997 67899999999999964 6666666 5566555554 432 33221 122233222222 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||.++|..
T Consensus 101 ~vid~~G~~ 109 (176)
T d2fzwa2 101 YSFECIGNV 109 (176)
T ss_dssp EEEECSCCH
T ss_pred EeeecCCCH
Confidence 999999864
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.015 Score=41.92 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=47.7
Q ss_pred CceEEEEccCcchhHH-HHHHHHhC-CCCEEEEE-cCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKF-IVEASVKA-GHPTFVLV-RESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~-l~~~L~~~-g~~V~~~~-R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
+++|.|+| +|.+|+. .++.|.+. +.+++++. ++. ++.. ..+.+ ++.+ .++. .++.+++|+
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~-----~~~~~~~~~~---~~~~----~~~~---~~l~~~~D~ 64 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTR-----AKALPICESW---RIPY----ADSL---SSLAASCDA 64 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSC-----TTHHHHHHHH---TCCB----CSSH---HHHHTTCSE
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechh-----Hhhhhhhhcc---cccc----cccc---hhhhhhccc
Confidence 47899999 7999986 46666654 46777654 542 2221 11222 2221 2233 344578999
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+.+.+.. ....++.+|.++|
T Consensus 65 V~I~tp~~---~h~~~~~~al~~g 85 (164)
T d1tlta1 65 VFVHSSTA---SHFDVVSTLLNAG 85 (164)
T ss_dssp EEECSCTT---HHHHHHHHHHHTT
T ss_pred ccccccch---hcccccccccccc
Confidence 99888754 3455555555655
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.30 E-value=0.0084 Score=40.77 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=32.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++++|+| +|+||-.++..|.+.|.+|+++.|+..
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence 47899999 699999999999999999999998854
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.28 E-value=0.0024 Score=49.79 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=33.5
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|++.++|+|+| .|..|..++..|.++|++|.++.|+.
T Consensus 3 ~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 3 MHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 55578999999 69999999999999999999999974
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.27 E-value=0.0052 Score=45.09 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=53.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEE-ccCCC-HHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVV-GDVLN-HESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~-~D~~d-~~~~~~~~~--~~d 78 (310)
.+|+|+| .|.+|...++.+...| .+|++++++ ++|.+..+++ ++. ++. -|-.+ .+.+.+... ++|
T Consensus 31 ~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~-----~~kl~~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d 101 (176)
T d1d1ta2 31 STCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLN-----KDKFEKAMAV---GATECISPKDSTKPISEVLSEMTGNNVG 101 (176)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred CEEEEEC-CCchhHHHHHHHHHcCCceEEEecCc-----HHHHHHHHhc---CCcEEECccccchHHHHHHHHhccccce
Confidence 4799998 5999999999999999 579999998 6677666665 433 332 22222 334444443 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||.+.+..
T Consensus 102 ~vi~~~g~~ 110 (176)
T d1d1ta2 102 YTFEVIGHL 110 (176)
T ss_dssp EEEECSCCH
T ss_pred EEEEeCCch
Confidence 999998865
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.26 E-value=0.008 Score=40.70 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=32.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++|+|+| .|++|..++..|.+.|.+|+++.|...
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence 47999999 699999999999999999999999854
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.07 E-value=0.0071 Score=41.37 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=31.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
+++++|+| .|+||..++..|.+.|.+|+++.|+.
T Consensus 20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEech
Confidence 46899999 69999999999999999999999873
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.0033 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=31.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|.|+|| |.+|+.++..++..|++|++++++.
T Consensus 4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~ 37 (192)
T d1f0ya2 4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE 37 (192)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence 479999995 9999999999999999999999983
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.99 E-value=0.012 Score=39.84 Aligned_cols=35 Identities=23% Similarity=0.484 Sum_probs=31.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|.| .|++|-.++..|.+.|.+|+++.|...
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence 57999999 699999999999999999999999753
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.93 E-value=0.0086 Score=43.33 Aligned_cols=88 Identities=17% Similarity=0.226 Sum_probs=57.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCC-C-HHHHHHHhcCCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVL-N-HESLVNAIKQVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d-~~~~~~~~~~~d~Vi~ 82 (310)
.+|+|.| +|-+|...++.+...|.+|++++++ +++....+ ..++..+...-. | .+.+.+...+.+.++.
T Consensus 29 ~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~-----~~r~~~~k---~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~ 99 (168)
T d1rjwa2 29 EWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAK---ELGADLVVNPLKEDAAKFMKEKVGGVHAAVV 99 (168)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HTTCSEEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEee-cccchhhhhHHHhcCCCeEeccCCC-----HHHhhhhh---hcCcceecccccchhhhhcccccCCCceEEe
Confidence 5899987 5999999999999999999999988 55664443 446655543322 2 3445555667777777
Q ss_pred cccchhhhhHHHHHHHHHHcC
Q 021596 83 TVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~ 103 (310)
+++.. ......+++++..|
T Consensus 100 ~~~~~--~~~~~a~~~l~~~G 118 (168)
T d1rjwa2 100 TAVSK--PAFQSAYNSIRRGG 118 (168)
T ss_dssp SSCCH--HHHHHHHHHEEEEE
T ss_pred ecCCH--HHHHHHHHHhccCC
Confidence 66543 22334444444433
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.93 E-value=0.018 Score=39.26 Aligned_cols=35 Identities=34% Similarity=0.439 Sum_probs=31.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|.| .|++|..++..|.+.|.+|+++.|...
T Consensus 30 ~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 30 VNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence 46899998 699999999999999999999988753
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.014 Score=43.69 Aligned_cols=79 Identities=14% Similarity=0.066 Sum_probs=47.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEE------ccCCCHHHHHHHhc-CC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVV------GDVLNHESLVNAIK-QV 77 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~------~D~~d~~~~~~~~~-~~ 77 (310)
|||+++| ++..|..+++.|++.|++|.++.-.+++. ....+........++.+.. -+..+++.+..+-+ ++
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~~~-~~~~~v~~~a~~~~ipv~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDKD-GKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALGA 78 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCCS-SCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTTCC
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCCcC-cCCChhhhhHHhcCCcccccccccccccccHHHHHHHHHhCC
Confidence 7899998 78999999999999999998765432221 1111111221223443333 23445555554433 68
Q ss_pred CEEEEccc
Q 021596 78 DVVISTVG 85 (310)
Q Consensus 78 d~Vi~~a~ 85 (310)
|+++....
T Consensus 79 Dliv~~~~ 86 (203)
T d2bw0a2 79 ELNVLPFC 86 (203)
T ss_dssp SEEEESSC
T ss_pred CceEEeec
Confidence 98887653
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.91 E-value=0.007 Score=44.94 Aligned_cols=92 Identities=15% Similarity=0.313 Sum_probs=56.4
Q ss_pred ceEEE-EccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEc---cCCCH-HHHHHHh----
Q 021596 5 SKILS-IGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVG---DVLNH-ESLVNAI---- 74 (310)
Q Consensus 5 ~~IlI-~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~---D~~d~-~~~~~~~---- 74 (310)
.+++| .||+|.+|...++.....|.+|++++|+.++. .+..+.++..++. ++.- |..+. +.+.+..
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~----~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL----DEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH----HHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc----chHHhhhhhccccEEEeccccchhHHHHHHHHHHhhcc
Confidence 45777 58999999999999999999999999885432 2222333344543 3332 22221 2233332
Q ss_pred cCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 75 KQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.++|+|+++.+.. .....++.++..|
T Consensus 106 ~~vdvv~D~vg~~---~~~~~~~~l~~~G 131 (189)
T d1gu7a2 106 GEAKLALNCVGGK---SSTGIARKLNNNG 131 (189)
T ss_dssp CCEEEEEESSCHH---HHHHHHHTSCTTC
T ss_pred CCceEEEECCCcc---hhhhhhhhhcCCc
Confidence 2699999998843 2344555555544
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.85 E-value=0.02 Score=41.66 Aligned_cols=74 Identities=15% Similarity=0.100 Sum_probs=51.2
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcE-EEEccCCC--HHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVN-FVVGDVLN--HESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d--~~~~~~~~~--~~d 78 (310)
.+|+|+|+ |.+|...++.+...|. +|++.+++ ++|.+..+++ ++. ++...-.| .+....... ++|
T Consensus 29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~-----~~kl~~a~~l---Ga~~~i~~~~~d~~~~~~~~~~~~~G~d 99 (174)
T d1p0fa2 29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTH-----KDKFPKAIEL---GATECLNPKDYDKPIYEVICEKTNGGVD 99 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECC-CchhHHHHHHHHHcCCceeeccCCh-----HHHHHHHHHc---CCcEEEcCCCchhHHHHHHHHhcCCCCc
Confidence 58999985 9999999999999995 68888888 6666555544 543 33222222 233333333 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+||.+++..
T Consensus 100 ~vid~~g~~ 108 (174)
T d1p0fa2 100 YAVECAGRI 108 (174)
T ss_dssp EEEECSCCH
T ss_pred EEEEcCCCc
Confidence 999999865
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.76 E-value=0.0082 Score=40.96 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=32.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|+| +|++|..++..|.+.|.+|+++.|...
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence 47999999 699999999999999999999999864
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.017 Score=41.23 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=51.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
-|+++|+| .|.+|+.+++.|...|.+|.+..++ |.++ ++.. ..+.++. .+++++..+|+|+.+
T Consensus 24 Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d-----p~~a--l~A~-~dG~~v~--------~~~~a~~~adivvta 86 (163)
T d1li4a1 24 GKVAVVAG-YGDVGKGCAQALRGFGARVIITEID-----PINA--LQAA-MEGYEVT--------TMDEACQEGNIFVTT 86 (163)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH--HHHH-HTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred CCEEEEec-cccccHHHHHHHHhCCCeeEeeecc-----cchh--HHhh-cCceEee--------ehhhhhhhccEEEec
Confidence 47899998 9999999999999999999999988 3222 1221 2344443 355777889999999
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
++...
T Consensus 87 TGn~~ 91 (163)
T d1li4a1 87 TGCID 91 (163)
T ss_dssp SSCSC
T ss_pred CCCcc
Confidence 88654
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=95.65 E-value=0.051 Score=39.66 Aligned_cols=85 Identities=16% Similarity=0.129 Sum_probs=47.8
Q ss_pred CCCCceEEEEccCcchhHH-HHHHHHhCC--CCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-
Q 021596 1 MASKSKILSIGGTGYIGKF-IVEASVKAG--HPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~-l~~~L~~~g--~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|. +.+|.|+| +|.+|+. .++.+.+.+ ++|+++ +|+ +++.+.... .-+...+- .|. +++++
T Consensus 1 Mk-kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~-----~~~~~~~~~--~~~~~~~~---~~~---~ell~~ 65 (181)
T d1zh8a1 1 LR-KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRT-----RSHAEEFAK--MVGNPAVF---DSY---EELLES 65 (181)
T ss_dssp CC-CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSS-----HHHHHHHHH--HHSSCEEE---SCH---HHHHHS
T ss_pred CC-CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEecc-----Hhhhhhhhc--ccccccee---eee---eccccc
Confidence 44 46899999 7999987 467777644 466655 444 333322111 11222222 343 34454
Q ss_pred -CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 76 -QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 76 -~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++|+|+.+.+.. ....++..|.+.|
T Consensus 66 ~~id~v~I~tp~~---~h~~~~~~al~~g 91 (181)
T d1zh8a1 66 GLVDAVDLTLPVE---LNLPFIEKALRKG 91 (181)
T ss_dssp SCCSEEEECCCGG---GHHHHHHHHHHTT
T ss_pred cccceeecccccc---ccccccccccccc
Confidence 689999887754 3445555555555
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.62 E-value=0.0073 Score=40.89 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++|+|+| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence 47899999 699999999999999999999999853
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.62 E-value=0.0047 Score=45.81 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|.|+|| |.+|+.++..++..|++|++++++.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~ 37 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE 37 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence 478999995 9999999999999999999999983
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.62 E-value=0.028 Score=41.78 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=50.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccC-CCH-HHHHHHhc--CCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDV-LNH-ESLVNAIK--QVD 78 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~-~d~-~~~~~~~~--~~d 78 (310)
..+|+|+| +|-+|...+..+...|. +|++++++ ++|.+..+. .+...+.-.- .|. +.+.++.. ++|
T Consensus 26 G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~-----~~rl~~a~~---~Ga~~~~~~~~~~~~~~i~~~t~g~g~D 96 (195)
T d1kola2 26 GSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLN-----PARLAHAKA---QGFEIADLSLDTPLHEQIAALLGEPEVD 96 (195)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHH---TTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhhcccceeeeccc-----chhhHhhhh---ccccEEEeCCCcCHHHHHHHHhCCCCcE
Confidence 35899998 59999999988888885 67788887 556654444 3655544221 222 34445444 689
Q ss_pred EEEEcccc
Q 021596 79 VVISTVGH 86 (310)
Q Consensus 79 ~Vi~~a~~ 86 (310)
++|.+.|.
T Consensus 97 ~vid~vG~ 104 (195)
T d1kola2 97 CAVDAVGF 104 (195)
T ss_dssp EEEECCCT
T ss_pred EEEECccc
Confidence 99999884
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.59 E-value=0.0074 Score=41.26 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++++|+| +|++|-.++..|.+.|.+|+++.|++.
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence 57999999 699999999999999999999998753
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.49 E-value=0.019 Score=42.96 Aligned_cols=80 Identities=14% Similarity=0.068 Sum_probs=48.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCC--CchhhHhHhhhcCCcEEEE-ccCCCHHHHHHHhc-CCCEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSA--PSKSQLLDHFKNLGVNFVV-GDVLNHESLVNAIK-QVDVV 80 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~l~~~~~~~v~-~D~~d~~~~~~~~~-~~d~V 80 (310)
|||+++| ++..|..+++.|++.|++|.++.-.+++.. .............++.+.. .++.+.+.++.+-+ ++|.+
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli 79 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI 79 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence 6889997 677899999999999999976653322110 0001111222334666555 45666655544333 78988
Q ss_pred EEccc
Q 021596 81 ISTVG 85 (310)
Q Consensus 81 i~~a~ 85 (310)
+....
T Consensus 80 i~~g~ 84 (203)
T d2blna2 80 FSFYY 84 (203)
T ss_dssp EEESC
T ss_pred eeeec
Confidence 87754
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.47 E-value=0.00043 Score=51.28 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=28.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++|+|+| +|..+++++..|.+.| +|+++.|+
T Consensus 18 ~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~ 49 (177)
T d1nvta1 18 DKNIVIYG-AGGAARAVAFELAKDN-NIIIANRT 49 (177)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhh
Confidence 47999999 6889999999997766 89999998
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=95.45 E-value=0.036 Score=41.48 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=51.8
Q ss_pred CCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCC-----chhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-
Q 021596 2 ASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAP-----SKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 2 ~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
|.+|||+++| ++..+..+++.|++.|++|.++.-.+.+... ............++........+.+.+.+.++
T Consensus 1 ~~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (206)
T d1fmta2 1 SESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAE 79 (206)
T ss_dssp CCCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred CCCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhh
Confidence 4579999998 7889999999999999998766543221100 00011122233456666665555555555555
Q ss_pred -CCCEEEEcccc
Q 021596 76 -QVDVVISTVGH 86 (310)
Q Consensus 76 -~~d~Vi~~a~~ 86 (310)
++|+++.+...
T Consensus 80 ~~~d~~v~~~~~ 91 (206)
T d1fmta2 80 LQADVMVVVAYG 91 (206)
T ss_dssp TTCSEEEEESCC
T ss_pred hcceEEEeeccc
Confidence 68887776554
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.44 E-value=0.014 Score=43.53 Aligned_cols=67 Identities=21% Similarity=0.274 Sum_probs=47.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~ 82 (310)
.++|+|-| -|.+|+++++.|.+.|.+|++.+.+ +.+. ......+.+.+. .+ +++. +||+++-
T Consensus 27 gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d-----~~~~---~~~~~~g~~~~~-----~~---~~~~~~~DI~iP 89 (201)
T d1c1da1 27 GLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD-----TERV---AHAVALGHTAVA-----LE---DVLSTPCDVFAP 89 (201)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHH---HHHHHTTCEECC-----GG---GGGGCCCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch-----HHHH---HHHHhhcccccC-----cc---ccccccceeeec
Confidence 37899998 8999999999999999999987765 3333 222334544432 22 3455 7999998
Q ss_pred cccch
Q 021596 83 TVGHA 87 (310)
Q Consensus 83 ~a~~~ 87 (310)
||...
T Consensus 90 cA~~~ 94 (201)
T d1c1da1 90 CAMGG 94 (201)
T ss_dssp CSCSC
T ss_pred ccccc
Confidence 87644
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.38 E-value=0.04 Score=40.35 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=49.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHh-HhhhcC-CcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-GHPTFVL-VRESTLSAPSKSQLL-DHFKNL-GVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~-~~l~~~-~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
++||.|+| +|.+|+..++.|... +.+|+++ +++ +++.... +...-+ ...+ ..|.+++-+- .++|+
T Consensus 1 kiki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~-~~iD~ 69 (184)
T d1ydwa1 1 QIRIGVMG-CADIARKVSRAIHLAPNATISGVASRS-----LEKAKAFATANNYPESTKI----HGSYESLLED-PEIDA 69 (184)
T ss_dssp CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHHTTCCTTCEE----ESSHHHHHHC-TTCCE
T ss_pred CeEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCC-----ccccccchhccccccceee----cCcHHHhhhc-cccce
Confidence 36899999 799999999999876 4677765 555 3333222 111111 1121 2344433321 36899
Q ss_pred EEEcccchhhhhHHHHHHHHHHcC
Q 021596 80 VISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 80 Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
|+.+.+.. ....++..|.+.|
T Consensus 70 v~I~tp~~---~h~~~~~~~l~~g 90 (184)
T d1ydwa1 70 LYVPLPTS---LHVEWAIKAAEKG 90 (184)
T ss_dssp EEECCCGG---GHHHHHHHHHTTT
T ss_pred eeecccch---hhcchhhhhhhcc
Confidence 99887754 3344455555555
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.011 Score=40.56 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++++|+| .|++|-.++..|.+.|.+|+++.|+..
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence 47999999 699999999999999999999999853
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.27 E-value=0.017 Score=41.47 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=30.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++|+|+|.+..+|+.++..|.++|..|+.+...
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~ 70 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 70 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred cceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence 4799999999999999999999999999877655
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.22 E-value=0.011 Score=40.57 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=57.1
Q ss_pred ceEEEEccCcchhHHHHHHHHh-CCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEE
Q 021596 5 SKILSIGGTGYIGKFIVEASVK-AGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVIS 82 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~ 82 (310)
-+|+|.| +|..|+.+++.+.. .+++++++.-+.+.. .. . .-.|+.+.. .+.+.+..+ .++.++.
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k----~G--~--~I~Gi~V~~-----~~~l~~~~~~~i~iai~ 69 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEK----VG--R--PVRGGVIEH-----VDLLPQRVPGRIEIALL 69 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTT----TT--C--EETTEEEEE-----GGGHHHHSTTTCCEEEE
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHh----cC--C--EECCEEEec-----HHHHHHHHhhcccEEEE
Confidence 4899999 69999999998754 457888876653321 10 1 123555543 234555444 5777777
Q ss_pred cccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 83 TVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 83 ~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+++. .....+++.|.++| ++.+.
T Consensus 70 ~i~~---~~~~~I~d~l~~~g-Ik~I~ 92 (126)
T d2dt5a2 70 TVPR---EAAQKAADLLVAAG-IKGIL 92 (126)
T ss_dssp CSCH---HHHHHHHHHHHHHT-CCEEE
T ss_pred eCCH---HHHHHHHHHHHHcC-CCEEe
Confidence 7664 34567889999998 88654
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.19 E-value=0.0063 Score=44.36 Aligned_cols=89 Identities=19% Similarity=0.118 Sum_probs=51.7
Q ss_pred CceEEEEccCcchhHH--HHHHHHhC----CCCEEEEEcCCCCCCCchhhHhHhh-------hcCCcEEEEccCCCHHHH
Q 021596 4 KSKILSIGGTGYIGKF--IVEASVKA----GHPTFVLVRESTLSAPSKSQLLDHF-------KNLGVNFVVGDVLNHESL 70 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~--l~~~L~~~----g~~V~~~~R~~~~~~~~~~~~~~~l-------~~~~~~~v~~D~~d~~~~ 70 (310)
.|||.|+|| |.+|.. ++..|+.. +.+++.++++ +++.+..... .....++... .+.
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~ 70 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDID-----EERLDAILTIAKKYVEEVGADLKFEKT-----MNL 70 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSC-----HHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCCeEEEEe-----CCh
Confidence 489999995 988865 34444433 3589999998 4443221111 1122333322 234
Q ss_pred HHHhcCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 71 VNAIKQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 71 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.++++++|+|+.+++........+.-....+.|
T Consensus 71 ~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g 103 (171)
T d1obba1 71 DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYG 103 (171)
T ss_dssp HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTT
T ss_pred hhcccCCCeEeeecccccccceeeehhcchhhh
Confidence 567899999999998765444333333334444
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.17 E-value=0.014 Score=42.17 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=51.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++++|+|-|.-+|+.++..|+++|..|+.+.++.... ..+. ..+.-.............+.+.+....+|+||..
T Consensus 29 GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsa 104 (171)
T d1edza1 29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRG---ESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 104 (171)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESC---CCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccc---cceeeeeeccccccccchhHHhhccccCCEEEEc
Confidence 47999999999999999999999999888766542110 0000 0000001111111123567788888889999998
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
+|..
T Consensus 105 vG~p 108 (171)
T d1edza1 105 VPSE 108 (171)
T ss_dssp CCCT
T ss_pred cCCC
Confidence 8754
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.15 E-value=0.015 Score=40.36 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=32.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|+| +|++|..++..|.+.|.+|+++.|...
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 47999999 699999999999999999999999854
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.04 E-value=0.012 Score=40.07 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
++++|.| .|++|-.++..|.+.|.+|+++.|++.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 6899999 699999999999999999999998854
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.01 E-value=0.089 Score=37.66 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=45.3
Q ss_pred ceEEEEccCcchhHH-HHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEE
Q 021596 5 SKILSIGGTGYIGKF-IVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~iG~~-l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi 81 (310)
+||.|+| +|.+|+. .++.|.+.+ .++.+++++ +++...... ..++..+..|+ ++ +++ ++|+|+
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~-----~~~~~~~~~--~~~~~~~~~~~---~~---ll~~~iD~V~ 67 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRN-----PKVLGTLAT--RYRVSATCTDY---RD---VLQYGVDAVM 67 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSC-----HHHHHHHHH--HTTCCCCCSST---TG---GGGGCCSEEE
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECC-----HHHHHHHHH--hcccccccccH---HH---hcccccceec
Confidence 7999999 6899976 566665554 466666665 333322221 12222222233 22 333 789999
Q ss_pred EcccchhhhhHHHHHHHHHHcC
Q 021596 82 STVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
.+.+... ...++.+|.+.|
T Consensus 68 I~tp~~~---H~~~~~~al~~g 86 (167)
T d1xeaa1 68 IHAATDV---HSTLAAFFLHLG 86 (167)
T ss_dssp ECSCGGG---HHHHHHHHHHTT
T ss_pred ccccccc---cccccccccccc
Confidence 8877643 444444444444
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.00 E-value=0.033 Score=40.12 Aligned_cols=35 Identities=6% Similarity=0.075 Sum_probs=31.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|+|+|.+..+|+.++..|.++|..|+.+....
T Consensus 39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred cceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 47999999999999999999999999998887763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.93 E-value=0.012 Score=39.57 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=31.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
+++++|.| +|++|-.++..|.+.|.+|+++.|.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 47899998 699999999999999999999998753
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=94.89 E-value=0.011 Score=44.11 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=27.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|+|.|+| .|++|..++..| ++|++|++++-+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din 31 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL 31 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence 7899997 899999998654 679999999887
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.79 E-value=0.014 Score=47.32 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=33.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG--HPTFVLVREST 39 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~ 39 (310)
|-.|++|+|+| +|.-|..++..|+++| ++|+++-|+..
T Consensus 1 m~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 1 LPTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 77789999999 6999999999999877 68999999843
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.76 E-value=0.21 Score=38.16 Aligned_cols=101 Identities=19% Similarity=0.179 Sum_probs=65.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC--------------CCchhhHhHh-hh--cCCcEEEEccC-C
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLLDH-FK--NLGVNFVVGDV-L 65 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~--------------~~~~~~~~~~-l~--~~~~~~v~~D~-~ 65 (310)
.+|+|+| .|.+|++++..|...|. ++++++.+.=.. ...|.+.+.+ +. .+.+++...+. .
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~ 109 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 109 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence 5899999 68999999999999995 677776542110 0123322222 21 34565555443 3
Q ss_pred CHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 66 NHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 66 d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
+.+.....+.+.|+|+.+.... .....+-++|.+.+ ++.+.
T Consensus 110 ~~~~~~~~~~~~divid~~d~~--~~~~~in~~~~~~~-ip~i~ 150 (247)
T d1jw9b_ 110 DDAELAALIAEHDLVLDCTDNV--AVRNQLNAGCFAAK-VPLVS 150 (247)
T ss_dssp CHHHHHHHHHTSSEEEECCSSH--HHHHHHHHHHHHHT-CCEEE
T ss_pred hhccccccccccceeeeccchh--hhhhhHHHHHHHhC-CCccc
Confidence 4566667778999999988764 34445667777877 65444
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=94.72 E-value=0.02 Score=41.14 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=44.6
Q ss_pred ceEEEEccCcchhHHHHHH-HHhC-----CCCEEEEEcCCCCCCCchhhHhHhh----hcCCcEEEEccCCCHHHHHHHh
Q 021596 5 SKILSIGGTGYIGKFIVEA-SVKA-----GHPTFVLVRESTLSAPSKSQLLDHF----KNLGVNFVVGDVLNHESLVNAI 74 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~-L~~~-----g~~V~~~~R~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~~~~~~ 74 (310)
|||.|+|| |.+|...+-. |+.. ..+++.++.+ +.+.+....+ ......+... .+ ..+++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did-----~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l 69 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDID-----EEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAV 69 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSC-----HHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecC-----cHHHHHHHHHHHhhhccCceEEEe--cC---ccccc
Confidence 68999997 6678776633 3322 2478999887 4444332222 1233333332 12 23567
Q ss_pred cCCCEEEEcccchh
Q 021596 75 KQVDVVISTVGHAL 88 (310)
Q Consensus 75 ~~~d~Vi~~a~~~~ 88 (310)
+++|+|+.+++...
T Consensus 70 ~~aDvVVita~~~~ 83 (162)
T d1up7a1 70 VDAKYVIFQFRPGG 83 (162)
T ss_dssp TTCSEEEECCCTTH
T ss_pred CCCCEEEEecccCC
Confidence 89999999999764
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=94.71 E-value=0.014 Score=40.61 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=67.1
Q ss_pred CceEEEEccC---cchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
.++|+|+||| +..|..+++.|++.|++++.+.-+.... . -.+... ..++ .++-..+|.|
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~---------~--i~g~~~-~~~l------~~i~~~iD~v 74 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE---------E--LFGEEA-VASL------LDLKEPVDIL 74 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS---------E--ETTEEC-BSSG------GGCCSCCSEE
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc---------e--eeceec-ccch------hhccCCCceE
Confidence 4689999999 5799999999999999988765542111 0 011111 1122 1222468999
Q ss_pred EEcccchhhhhHHHHHHHHHHcCCccEEccCCCCCCccccCCCCCCcchhhHHHHHHHHHHHHHcCCCEE
Q 021596 81 ISTVGHALLADQVKIIAAIKEAGNVTRFFPSEFGNDVDRAHGAVEPAKSVYYDVKARIRRAVEAEGIPYT 150 (310)
Q Consensus 81 i~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~l~~~~~~~~ 150 (310)
+.+.+. .....+++.|.+.| ++.+++..-.. + .++.+.+++.|++++
T Consensus 75 ~v~~p~---~~v~~~v~~~~~~g-~k~i~~q~G~~-----~--------------~e~~~~a~~~Gi~vV 121 (136)
T d1iuka_ 75 DVFRPP---SALMDHLPEVLALR-PGLVWLQSGIR-----H--------------PEFEKALKEAGIPVV 121 (136)
T ss_dssp EECSCH---HHHTTTHHHHHHHC-CSCEEECTTCC-----C--------------HHHHHHHHHTTCCEE
T ss_pred EEeccH---HHHHHHHHHHHhhC-CCeEEEecCcc-----C--------------HHHHHHHHHcCCEEE
Confidence 998874 34566777777888 87776532110 0 134577778888765
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.17 Score=33.71 Aligned_cols=90 Identities=19% Similarity=0.238 Sum_probs=58.9
Q ss_pred CceEEEEccCc----------chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTG----------YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG----------~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++|+|+|+.. +-+.+.++.|.+.|++++.+.-|+..-+.. ..-..-+-..--..+.+.+.
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd---------~d~aD~lYfeplt~e~v~~I 74 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD---------YDTSDRLYFEPVTLEDVLEI 74 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS---------TTSSSEEECCCCSHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC---------hhhcCceEEccCCHHHHHHH
Confidence 58999999643 567789999999999999998885432110 11112222333356777777
Q ss_pred hc--CCCEEEEcccchhhhhHHHHHHHHHHcCCcc
Q 021596 74 IK--QVDVVISTVGHALLADQVKIIAAIKEAGNVT 106 (310)
Q Consensus 74 ~~--~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~ 106 (310)
++ ++|.|+-..|.. ...|+.....+.| ++
T Consensus 75 i~~E~p~~ii~~~GGQ---talnla~~L~~~g-v~ 105 (121)
T d1a9xa4 75 VRIEKPKGVIVQYGGQ---TPLKLARALEAAG-VP 105 (121)
T ss_dssp HHHHCCSEEECSSSTH---HHHTTHHHHHHTT-CC
T ss_pred HHHhCCCEEEeehhhh---hHHHHHHHHHHcC-Cc
Confidence 76 799998877643 3455555566666 54
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.66 E-value=0.032 Score=40.39 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=19.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG 28 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g 28 (310)
+++|+|+| +|.+|+..++.|.+..
T Consensus 7 k~kv~iIG-~G~~g~~h~~~l~~~~ 30 (172)
T d1lc0a1 7 KFGVVVVG-VGRAGSVRLRDLKDPR 30 (172)
T ss_dssp SEEEEEEC-CSHHHHHHHHHHTSHH
T ss_pred CcEEEEEc-CCHHHHHHHHHHHhCC
Confidence 57999999 6999999888876543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.61 E-value=0.037 Score=40.14 Aligned_cols=74 Identities=23% Similarity=0.302 Sum_probs=48.6
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCc-EEEEcc-CC-CHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGV-NFVVGD-VL-NHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~-~~v~~D-~~-d~~~~~~~~~--~~d 78 (310)
.+|+|+|+ |-+|...+..+...|. +|++++++ ++|.+..+++ |+ +++..+ -. ..+....... ++|
T Consensus 30 ~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~-----~~rl~~a~~~---GAd~~in~~~~~~~~~~~~~~~~~~G~d 100 (175)
T d1cdoa2 30 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN-----PDKFEKAKVF---GATDFVNPNDHSEPISQVLSKMTNGGVD 100 (175)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEEec-CCccchHHHHHHHHhhchheeecch-----HHHHHHHHHc---CCcEEEcCCCcchhHHHHHHhhccCCcc
Confidence 58999985 6688888888888774 68888888 6666555443 54 444322 11 2234444433 799
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+|+.++|..
T Consensus 101 ~vid~~G~~ 109 (175)
T d1cdoa2 101 FSLECVGNV 109 (175)
T ss_dssp EEEECSCCH
T ss_pred eeeeecCCH
Confidence 999999865
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.56 E-value=0.014 Score=39.94 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=32.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL 40 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 40 (310)
+++++|+| .|++|-.++..|.+.|.+|+++.|+...
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 47899999 6999999999999999999999998543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.47 E-value=0.2 Score=35.32 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=26.0
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
||.++| .|..|+.+++.|++.|+.+ +..|+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~ 31 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRT 31 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSS
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCC
Confidence 789999 7999999999999988855 56776
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.35 E-value=0.027 Score=41.16 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=32.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|+| +|..|...+..|.++||+|+++.+...
T Consensus 43 ~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 43 KKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence 68999999 699999999999999999999999753
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.32 E-value=0.022 Score=45.86 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
+|+|+|+| +|.-|..+|..|.++|++|.++-++.
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 58999999 69999999999999999999998874
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.27 E-value=0.023 Score=41.81 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=31.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~ 39 (310)
.+||+|+| +|..|...+..|.++|+ +|+++.|+..
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 47999999 69999999999999998 5999998743
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.11 E-value=0.025 Score=38.66 Aligned_cols=35 Identities=26% Similarity=0.210 Sum_probs=31.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++++|+| .|+||-.++..|.+.|.+|+++.|...
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 47899999 699999999999999999999998753
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.04 E-value=0.044 Score=39.33 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=52.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
.++|.|+| -|.+|.+=+..|.+.|.+|++-.|..+++ . +.-+..|.++ -++.++.+.+|+|..+
T Consensus 16 ~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s-~------~~A~~~Gf~v--------~~~~eA~~~aDiim~L 79 (182)
T d1np3a2 16 GKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSAT-V------AKAEAHGLKV--------ADVKTAVAAADVVMIL 79 (182)
T ss_dssp TSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHH-H------HHHHHTTCEE--------ECHHHHHHTCSEEEEC
T ss_pred CCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCcc-H------HHHhhhcccc--------ccHHHHhhhcCeeeee
Confidence 47999999 89999999999999999999998885432 1 2223456655 3456778899999999
Q ss_pred ccch
Q 021596 84 VGHA 87 (310)
Q Consensus 84 a~~~ 87 (310)
++..
T Consensus 80 ~PD~ 83 (182)
T d1np3a2 80 TPDE 83 (182)
T ss_dssp SCHH
T ss_pred cchH
Confidence 9854
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.99 E-value=0.024 Score=44.34 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=29.3
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+|+| +|..|..++.+|.++|++|.++.|+.
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 99999 69999999999999999999999874
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.93 E-value=0.1 Score=36.86 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=28.9
Q ss_pred ceEEEEc-cCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 5 SKILSIG-GTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~G-atG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
+.++|++ +.|++|..++..|.+.|.+|+++.+..
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 4666662 469999999999999999999999984
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.89 E-value=0.023 Score=44.83 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=30.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+|+|+| +|.-|...+..|.++|++|.++-++.
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 6899999 59999999999999999999998873
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.89 E-value=0.037 Score=37.40 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=31.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|.| +|++|..++..|.+.|.+|.++.|.+.
T Consensus 22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence 36899999 699999999999999999999999854
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=93.79 E-value=0.13 Score=36.91 Aligned_cols=97 Identities=20% Similarity=0.157 Sum_probs=58.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC--------c------------EEEEccC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG--------V------------NFVVGDV 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~--------~------------~~v~~D~ 64 (310)
|+|.|=| =|.||+.+.+.|.+++.+|.++.-.. . .+. ....++... + .+....-
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~~--~-~~~--~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~ 74 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALINDLT--D-NKT--LAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV 74 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSS--C-HHH--HHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCc--c-hhh--hhheeecccccCccccccccccceeEecceeEEEEec
Confidence 5888887 89999999999999998887776321 1 111 111122111 1 1111223
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
.|++.+.=.-.++|+|+-|.|.+. +...++.-.+.| +++++.|
T Consensus 75 ~~p~~i~W~~~gvdiViEcTG~f~---~~~~~~~hl~~g-akkViiS 117 (168)
T d2g82a1 75 KDPKEIPWAEAGVGVVIESTGVFT---DADKAKAHLEGG-AKKVIIT 117 (168)
T ss_dssp SSGGGCCTGGGTEEEEEECSSSCC---BHHHHTHHHHTT-CSEEEES
T ss_pred CChHHCcccccCCceeEecccccc---chHHhhhhhccc-cceeeec
Confidence 355544422338999999999764 233333444557 9998875
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=93.78 E-value=0.074 Score=37.70 Aligned_cols=68 Identities=19% Similarity=0.269 Sum_probs=52.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVIST 83 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~ 83 (310)
-|+++|.| =|.+|+-+++.|...|.+|+++-.+ |-++ ++.. -.|.++. .+.++++..|+++-+
T Consensus 23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D-----Pi~a--lqA~-mdGf~v~--------~~~~a~~~aDi~vTa 85 (163)
T d1v8ba1 23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEID-----PICA--IQAV-MEGFNVV--------TLDEIVDKGDFFITC 85 (163)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHHH--HHHH-TTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred CCEEEEec-ccccchhHHHHHHhCCCEEEEEecC-----chhh--HHHH-hcCCccC--------chhHccccCcEEEEc
Confidence 47899998 8999999999999999999999988 4332 2221 2455543 345788899999999
Q ss_pred ccchh
Q 021596 84 VGHAL 88 (310)
Q Consensus 84 a~~~~ 88 (310)
+|...
T Consensus 86 TGn~~ 90 (163)
T d1v8ba1 86 TGNVD 90 (163)
T ss_dssp CSSSS
T ss_pred CCCCc
Confidence 98765
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.72 E-value=0.066 Score=40.62 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=46.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc-CCCEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK-QVDVVIS 82 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~ 82 (310)
.++|+|-| -|.+|+++++.|.+.|.+|++.+.+ ..... ......+.+.+ +.+ +++. +||+++-
T Consensus 39 g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~-----~~~~~--~~~~~~g~~~~-----~~~---~~~~~~cDIl~P 102 (230)
T d1leha1 39 GLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN-----KAAVS--AAVAEEGADAV-----APN---AIYGVTCDIFAP 102 (230)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHH--HHHHHHCCEEC-----CGG---GTTTCCCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc-----HHHHH--HHHHhcCCccc-----CCc---ccccccccEecc
Confidence 47899998 8999999999999999999987665 22221 22222344332 222 2334 7999999
Q ss_pred cccchh
Q 021596 83 TVGHAL 88 (310)
Q Consensus 83 ~a~~~~ 88 (310)
||-...
T Consensus 103 cA~~~~ 108 (230)
T d1leha1 103 CALGAV 108 (230)
T ss_dssp CSCSCC
T ss_pred cccccc
Confidence 987553
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=93.60 E-value=0.18 Score=36.96 Aligned_cols=89 Identities=19% Similarity=0.262 Sum_probs=59.9
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEc-cC----------------
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVG-DV---------------- 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~-D~---------------- 64 (310)
+||.|+| -|.-|..++..|.+.|. .|..+.-+.. . +.|... ...+..+ +.
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD-----~----~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~a 70 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTD-----L----QVLEASNADVKIQIGENITRGLGAGGRPEIGEQA 70 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESC-----H----HHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHH
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCC-----H----HHHhcCCcceEEecccccCCCcccccCchhhHhH
Confidence 5799999 79999999999999884 4655554421 1 122221 1222222 11
Q ss_pred --CCHHHHHHHhcCCCEEEEcccchh---hhhHHHHHHHHHHcC
Q 021596 65 --LNHESLVNAIKQVDVVISTVGHAL---LADQVKIIAAIKEAG 103 (310)
Q Consensus 65 --~d~~~~~~~~~~~d~Vi~~a~~~~---~~~~~~~~~aa~~~~ 103 (310)
.+.+.+.+.++++|.||.+||... ...+--+.+.|++.+
T Consensus 71 a~e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g 114 (194)
T d1w5fa1 71 ALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMG 114 (194)
T ss_dssp HHHTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcC
Confidence 145778888999999999998766 444556888888887
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.59 E-value=0.037 Score=42.73 Aligned_cols=34 Identities=21% Similarity=0.146 Sum_probs=31.4
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.+||+|+| .|..|..++..|.++|++|+++.|+.
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 57999999 59999999999999999999999874
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=93.53 E-value=0.35 Score=34.49 Aligned_cols=88 Identities=16% Similarity=0.090 Sum_probs=52.6
Q ss_pred ceEEEEccCcchhHH-HHHHHHhCC-----CCEEEEEcCCCCCCCchhhHhHhh-------hcCCcEEEEccCCCHHHHH
Q 021596 5 SKILSIGGTGYIGKF-IVEASVKAG-----HPTFVLVRESTLSAPSKSQLLDHF-------KNLGVNFVVGDVLNHESLV 71 (310)
Q Consensus 5 ~~IlI~GatG~iG~~-l~~~L~~~g-----~~V~~~~R~~~~~~~~~~~~~~~l-------~~~~~~~v~~D~~d~~~~~ 71 (310)
.||.|+|| |.+|.. ++..|+.+- .+++.++.+ +++++..... .....++.... +..
T Consensus 4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 72 (167)
T d1u8xx1 4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDND-----KERQDRIAGACDVFIREKAPDIEFAATT-----DPE 72 (167)
T ss_dssp EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSC-----HHHHHHHHHHHHHHHHHHCTTSEEEEES-----CHH
T ss_pred ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCC-----hhHHHHHHHHHHHHHHHhCCCcceEecC-----Chh
Confidence 68999997 556654 445555432 378888887 4444321111 11223333321 245
Q ss_pred HHhcCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 72 NAIKQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 72 ~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++++++|+|+.+++.....+....-....++|
T Consensus 73 eal~~AD~Vvitag~~~~~g~~rd~~i~~~~G 104 (167)
T d1u8xx1 73 EAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG 104 (167)
T ss_dssp HHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred hccCCCCEEEECCCcCCCCceeHHHhhchhcC
Confidence 67889999999999876555555555556666
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=93.51 E-value=0.0034 Score=44.89 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=36.5
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEEEcccc
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVISTVGH 86 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi~~a~~ 86 (310)
|-++| +|.+|+++++.|.+.++.+.+..|+ +++.+.+... .+.. ..+. .++++.+|+||.+.+.
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~-----~~~~~~l~~~--~~~~--~~~~------~~~~~~~DiVil~v~d 65 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRS-----IDRARNLAEV--YGGK--AATL------EKHPELNGVVFVIVPD 65 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSS-----HHHHHHHHHH--TCCC--CCSS------CCCCC---CEEECSCT
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCC-----hhhhcchhhc--cccc--ccch------hhhhccCcEEEEeccc
Confidence 56787 8999999999886544444578887 5555333222 1111 1122 2356789999999886
Q ss_pred h
Q 021596 87 A 87 (310)
Q Consensus 87 ~ 87 (310)
.
T Consensus 66 ~ 66 (153)
T d2i76a2 66 R 66 (153)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=93.41 E-value=0.52 Score=31.11 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=30.6
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
..+|+|-|-||..|+.-++..++.|.+|++-+..
T Consensus 6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtP 39 (119)
T d2nu7a1 6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP 39 (119)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEcc
Confidence 4689999999999999999999999998877765
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=93.39 E-value=0.064 Score=40.54 Aligned_cols=72 Identities=17% Similarity=0.140 Sum_probs=39.8
Q ss_pred ceEEEEccCcchhH-HHHHHHHhC-CCCEEEE-EcCCCCCCCchhhHhHhhhcCCcEEEE-ccCCCHHHHHHHhc--CCC
Q 021596 5 SKILSIGGTGYIGK-FIVEASVKA-GHPTFVL-VRESTLSAPSKSQLLDHFKNLGVNFVV-GDVLNHESLVNAIK--QVD 78 (310)
Q Consensus 5 ~~IlI~GatG~iG~-~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~l~~~~~~~v~-~D~~d~~~~~~~~~--~~d 78 (310)
-+|.|+| +|.+|+ ++++.+... +.+|+++ +|+ +++..... +.-++.... -.+.| ++++++ ++|
T Consensus 34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~-----~~~a~~~~--~~~~i~~~~~~~~~d---~~ell~~~~iD 102 (221)
T d1h6da1 34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGN-----AEKAKIVA--AEYGVDPRKIYDYSN---FDKIAKDPKID 102 (221)
T ss_dssp EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSC-----HHHHHHHH--HHTTCCGGGEECSSS---GGGGGGCTTCC
T ss_pred EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCC-----HHHHHHHH--HhhccccccccccCc---hhhhcccccce
Confidence 4899999 699997 566766554 4677755 454 33332211 111221000 01233 334454 689
Q ss_pred EEEEcccch
Q 021596 79 VVISTVGHA 87 (310)
Q Consensus 79 ~Vi~~a~~~ 87 (310)
+|+.+++..
T Consensus 103 ~V~I~tp~~ 111 (221)
T d1h6da1 103 AVYIILPNS 111 (221)
T ss_dssp EEEECSCGG
T ss_pred eeeeccchh
Confidence 998887764
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.33 E-value=0.43 Score=32.09 Aligned_cols=74 Identities=18% Similarity=0.185 Sum_probs=50.9
Q ss_pred CceEEEEccCc----------chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGTG----------YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~GatG----------~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~ 73 (310)
.++|+|+|+.. +-+.+.++.|.+.|++++.+.-|+..-+.. ..-..-+-..--..+.+.++
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd---------~d~aD~lYfePlt~e~v~~I 77 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD---------PEMADATYIEPIHWEVVRKI 77 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC---------GGGSSEEECSCCCHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC---------hhhcceeeeecCCHHHHHHH
Confidence 58999999643 457889999999999999988885331110 01112223333467888888
Q ss_pred hc--CCCEEEEcccc
Q 021596 74 IK--QVDVVISTVGH 86 (310)
Q Consensus 74 ~~--~~d~Vi~~a~~ 86 (310)
++ ++|.|+...|.
T Consensus 78 i~~E~pd~il~~~GG 92 (127)
T d1a9xa3 78 IEKERPDAVLPTMGG 92 (127)
T ss_dssp HHHHCCSEEECSSSH
T ss_pred HHHhCcCCeEEEeee
Confidence 87 79999987764
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.28 E-value=0.14 Score=37.41 Aligned_cols=25 Identities=32% Similarity=0.493 Sum_probs=22.4
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAG 28 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g 28 (310)
|+ ++|.|=| =|.||+.+.+.+++++
T Consensus 1 M~--ikigING-FGRIGR~vlR~~~~~~ 25 (190)
T d1k3ta1 1 MP--IKVGING-FGRIGRMVFQALCEDG 25 (190)
T ss_dssp CC--EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred CC--eEEEEEC-CChHHHHHHHHHHHcC
Confidence 55 8999998 8999999999999875
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.09 E-value=0.084 Score=39.16 Aligned_cols=83 Identities=17% Similarity=0.172 Sum_probs=50.8
Q ss_pred ceEEEEccCcchhHH-HHHHH---HhCC-----CCEEEEEcCCCCCC-------------CchhhHhHhhhcCCcEEEEc
Q 021596 5 SKILSIGGTGYIGKF-IVEAS---VKAG-----HPTFVLVRESTLSA-------------PSKSQLLDHFKNLGVNFVVG 62 (310)
Q Consensus 5 ~~IlI~GatG~iG~~-l~~~L---~~~g-----~~V~~~~R~~~~~~-------------~~~~~~~~~l~~~~~~~v~~ 62 (310)
..++|+||||-+... |...| ...| ..|+++.|+.-+.. .........+ ...+.++.+
T Consensus 21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f-~~~~~Y~~~ 99 (203)
T d1qkia1 21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDF-FARNSYVAG 99 (203)
T ss_dssp EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHH-HTTEECCBC
T ss_pred cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHH-HHhhccccC
Confidence 479999999998877 55655 3333 46899999853321 0000000111 245788999
Q ss_pred cCCCHHHHHHHhc---------CCCEEEEcccchh
Q 021596 63 DVLNHESLVNAIK---------QVDVVISTVGHAL 88 (310)
Q Consensus 63 D~~d~~~~~~~~~---------~~d~Vi~~a~~~~ 88 (310)
|+.|++++.++-+ ....||.+|-+..
T Consensus 100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~ 134 (203)
T d1qkia1 100 QYDDAASYQRLNSHMNALHLGSQANRLFYLALPPT 134 (203)
T ss_dssp CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHH
T ss_pred cCCChhhHHHHHHHHHHHhcCCCcceEEEEecCHH
Confidence 9999988766422 2346777665543
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.03 E-value=0.17 Score=39.62 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=28.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
++|+|-| -|.+|+++++.|.+.|.+|++++-+
T Consensus 37 ktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 37 KTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6899998 7999999999999999999887643
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=92.90 E-value=0.038 Score=43.93 Aligned_cols=34 Identities=15% Similarity=0.309 Sum_probs=30.8
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|..|+|+| +|.-|..+|+.|.+.|++|.++-++.
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45899999 69999999999999999999998874
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.86 E-value=0.18 Score=36.14 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=48.6
Q ss_pred CceEEEEccC-cchhHHHHHHHHhCC----CCEEEEEcCCCCCCCchhhHhHhh-----hcCCcEEEEccCCCHHHHHHH
Q 021596 4 KSKILSIGGT-GYIGKFIVEASVKAG----HPTFVLVRESTLSAPSKSQLLDHF-----KNLGVNFVVGDVLNHESLVNA 73 (310)
Q Consensus 4 ~~~IlI~Gat-G~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~l-----~~~~~~~v~~D~~d~~~~~~~ 73 (310)
+|||.|+||. .+.+..++..+.... -++..++.+... .+.+....+ ...+..+-....+|. .++
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~---~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~a 74 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK---EKLEIVGALAKRMVEKAGVPIEIHLTLDR---RRA 74 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH---HHHHHHHHHHHHHHHHTTCCCEEEEESCH---HHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH---HHHHHHHHHHHHHHHhcCCCceeeecCCc---hhh
Confidence 4799999962 234455555555432 367788877321 123222221 112222222222332 456
Q ss_pred hcCCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 74 IKQVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 74 ~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++++|+|+.+++.....+....-....+.|
T Consensus 75 l~gaDvVv~ta~~~~~~~~~r~~~i~~~~g 104 (169)
T d1s6ya1 75 LDGADFVTTQFRVGGLEARAKDERIPLKYG 104 (169)
T ss_dssp HTTCSEEEECCCTTHHHHHHHHHHTGGGGT
T ss_pred cCCCCEEEEccccCCCCCeehhhhhhhhcC
Confidence 889999999999765333333333333444
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.85 E-value=0.24 Score=37.81 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus 31 g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 31 GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 37899998 8999999999999999999887643
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.55 E-value=0.043 Score=38.69 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=29.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
.++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus 13 gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 13 DKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp TCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 479999995 999999999999999999999754
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=92.51 E-value=0.45 Score=34.84 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=40.4
Q ss_pred CCCCceEE-EEccCcchhHH-HHHHHHh---CC-----CCEEEEEcCCCCCCCchhhHhHhhh------------cCCcE
Q 021596 1 MASKSKIL-SIGGTGYIGKF-IVEASVK---AG-----HPTFVLVRESTLSAPSKSQLLDHFK------------NLGVN 58 (310)
Q Consensus 1 M~~~~~Il-I~GatG~iG~~-l~~~L~~---~g-----~~V~~~~R~~~~~~~~~~~~~~~l~------------~~~~~ 58 (310)
|+...+++ |+||||-+.+. |.+.|-+ .| +.|+++.|+.-+...-+....+.+. -..+.
T Consensus 1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~ 80 (195)
T d1h9aa1 1 VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFS 80 (195)
T ss_dssp CCCCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEE
T ss_pred CCCCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccc
Confidence 66555555 78999999887 5555533 33 4689999985332110100011111 13567
Q ss_pred EEEccCCCHHHHH
Q 021596 59 FVVGDVLNHESLV 71 (310)
Q Consensus 59 ~v~~D~~d~~~~~ 71 (310)
.+.+|+.++++..
T Consensus 81 y~~~~~~~~~~~~ 93 (195)
T d1h9aa1 81 YRAHDVTDAASYA 93 (195)
T ss_dssp EEECCTTCTTTHH
T ss_pred eeeEeeccHhhHH
Confidence 7888887765443
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.50 E-value=0.75 Score=33.94 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=60.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCC--cEEEEcc-C---------------
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLG--VNFVVGD-V--------------- 64 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~--~~~v~~D-~--------------- 64 (310)
..+|.|+| -|.-|..++..|.+.|. .|..+.-+.. . +.|.... ..+..+. +
T Consensus 15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD-----~----~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~ 84 (209)
T d2vapa1 15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTD-----A----QQLIRTKADKKILIGKKLTRGLGAGGNPKIGEE 84 (209)
T ss_dssp CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESB-----H----HHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHH
T ss_pred CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCC-----H----HHHhcCCcchhcccccccccccccccchHHHHH
Confidence 46899999 79999999999999985 4665555521 1 1222211 2222221 1
Q ss_pred ---CCHHHHHHHhcCCCEEEEcccchh---hhhHHHHHHHHHHcC
Q 021596 65 ---LNHESLVNAIKQVDVVISTVGHAL---LADQVKIIAAIKEAG 103 (310)
Q Consensus 65 ---~d~~~~~~~~~~~d~Vi~~a~~~~---~~~~~~~~~aa~~~~ 103 (310)
.+.+.+.+.++++|.||.+||... ...+--+.+.|++.+
T Consensus 85 aa~e~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g 129 (209)
T d2vapa1 85 AAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIG 129 (209)
T ss_dssp HHHHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcC
Confidence 244688888999999999998776 344455788888887
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=92.38 E-value=0.057 Score=42.53 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=30.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|||+|+| +|.-|...+..|.+.|++|.++-++.
T Consensus 2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 7899999 69999999999999999999998763
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.27 E-value=0.053 Score=43.35 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|+|+| +|..|...+..|.++|++|.++-++.
T Consensus 30 pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 30 PKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47999999 69999999999999999999998863
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.23 E-value=0.063 Score=39.63 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=28.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~ 38 (310)
|||+|+| +|++|..++..|.+.+ .+|+++.|+.
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 7899999 5999999999998875 5688888764
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.04 E-value=0.013 Score=44.88 Aligned_cols=26 Identities=23% Similarity=0.309 Sum_probs=23.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCE
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPT 31 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V 31 (310)
|||+|+| +|-+|..++..|.++|++|
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence 7899999 6999999999999999764
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=91.83 E-value=0.58 Score=33.16 Aligned_cols=98 Identities=20% Similarity=0.141 Sum_probs=55.7
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVGD 63 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~D 63 (310)
++|.|=| =|.||+.+.+.++++. .+|.++.-. .. ++. ....++.. .++ +-...
T Consensus 2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~--~~-~~~--~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~ 75 (166)
T d1gado1 2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDL--LD-ADY--MAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTA 75 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECS--SC-HHH--HHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCC--CC-HHH--HhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEe
Confidence 6889988 8999999999999885 455555432 11 211 22222211 111 11112
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
-.+++.+.=.-.++|+|+-|.|.+. +..-+++-.+.| +++++.|.
T Consensus 76 ~~~p~~i~W~~~gvDiViEcTG~f~---t~~~~~~hl~~g-akkViiSa 120 (166)
T d1gado1 76 ERDPANLKWDEVGVDVVAEATGLFL---TDETARKHITAG-AKKVVMTG 120 (166)
T ss_dssp CSSGGGGCHHHHTCSEEEECSSSCC---SHHHHTHHHHTT-CSEEEESS
T ss_pred CCChHHCCccccCCCEEEEcccccc---CHHHHHHHhcCC-CceEEeec
Confidence 2344443211228999999999764 333333334557 99988753
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=91.72 E-value=0.81 Score=30.25 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=31.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
..+|+|-|-||..|+.-+++.++.|.+|++-+...
T Consensus 7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPg 41 (121)
T d1oi7a1 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPG 41 (121)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecC
Confidence 35899999999999999999999999988777653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.62 E-value=0.068 Score=41.97 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.+|+|.| .|-.|..++..|.+.|++|.++.|++
T Consensus 3 ~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 3 TQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3799999 59999999999999999999999873
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.53 E-value=0.11 Score=39.31 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=31.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.++|+|+| +|..|...+..|.++|++|+++.++..
T Consensus 49 ~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 49 KDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence 57999999 699999999999999999999988753
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=91.50 E-value=0.38 Score=31.81 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=29.0
Q ss_pred CceEEEEccCcchhHHHHHHHHh---CCCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK---AGHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~---~g~~V~~~~R~~~ 39 (310)
+++++|+| .|++|-.++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence 47999999 69999999987655 3789999999754
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.36 E-value=0.086 Score=37.84 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=28.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCC--CEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGH--PTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~--~V~~~~R~~ 38 (310)
-+||+|+| .|+.|-.++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 37999999 69999999999999885 577777664
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.28 E-value=0.11 Score=39.38 Aligned_cols=37 Identities=11% Similarity=0.258 Sum_probs=31.3
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|++.=-|+|+| +|.-|...+..|.++|++|.++-++.
T Consensus 2 m~~~yDviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 2 IDTDYDVIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp CCCBCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCcCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 44323479999 79999999999999999999999984
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=90.80 E-value=0.31 Score=39.16 Aligned_cols=72 Identities=24% Similarity=0.373 Sum_probs=51.5
Q ss_pred CceEEEEccCcchhHHHHHHHHh-CC-CCEEEEEcCCCCCCCchh-hHhHhhhc-CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK-AG-HPTFVLVRESTLSAPSKS-QLLDHFKN-LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~-~g-~~V~~~~R~~~~~~~~~~-~~~~~l~~-~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.+++.|+| +|.++..-++.+.+ .+ .+|++.+|+ +++. ...+.+.. .++++..++ +++++++++|+
T Consensus 128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~-----~~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADI 196 (340)
T d1x7da_ 128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTD-----PLATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDI 196 (340)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSE
T ss_pred CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecC-----hHHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCc
Confidence 36899999 89999988887765 34 579999998 3332 33444543 477776663 45678899999
Q ss_pred EEEcccc
Q 021596 80 VISTVGH 86 (310)
Q Consensus 80 Vi~~a~~ 86 (310)
|+.+++.
T Consensus 197 i~t~Tas 203 (340)
T d1x7da_ 197 ITTVTAD 203 (340)
T ss_dssp EEECCCC
T ss_pred eeecccc
Confidence 9987753
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=90.58 E-value=0.18 Score=37.40 Aligned_cols=74 Identities=15% Similarity=0.096 Sum_probs=51.0
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC------CCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG------HPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQV 77 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g------~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~ 77 (310)
+++|.|+| -|.+|.+=+..|.+.| ..|++-.|..+.+ ..++ +..|.+.....+. ++.++.+.+
T Consensus 44 ~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S-~~kA------~~dGf~v~~~~v~---~v~EAv~~A 112 (226)
T d1qmga2 44 IKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNS-FAEA------RAAGFSEENGTLG---DMWETISGS 112 (226)
T ss_dssp CSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSC-HHHH------HHTTCCGGGTCEE---EHHHHHHTC
T ss_pred CCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChh-HHHH------HHcCCccCCCccc---CHHHHHhhC
Confidence 57999999 8999999999999954 5687778876554 2222 2344432222222 345677899
Q ss_pred CEEEEcccchh
Q 021596 78 DVVISTVGHAL 88 (310)
Q Consensus 78 d~Vi~~a~~~~ 88 (310)
|+|..+++...
T Consensus 113 DiVmiLlPDe~ 123 (226)
T d1qmga2 113 DLVLLLISDSA 123 (226)
T ss_dssp SEEEECSCHHH
T ss_pred CEEEEecchHH
Confidence 99999998653
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.51 E-value=0.33 Score=34.07 Aligned_cols=34 Identities=15% Similarity=0.408 Sum_probs=28.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCC-EEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHP-TFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~-V~~~~R~~ 38 (310)
.++|+|+| .|++|.-.+..+++.|.+ |+++.|..
T Consensus 45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 46899998 699999999999999964 77888764
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.41 E-value=0.16 Score=36.62 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=29.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.++|+|+| +|++|-.++..|.+.|.+|.++.+..
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence 46899999 69999999999999999887776654
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=90.38 E-value=0.081 Score=38.41 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=27.3
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
+.+|+|+| +|++|-.++..|.+.|.++.++.+.
T Consensus 3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence 36899999 6999999999999999776655443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=90.38 E-value=0.12 Score=40.11 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=28.9
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+|+| +|..|..++..|.++|++|.++.+..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 89999 69999999999999999999999864
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.25 E-value=1.6 Score=31.83 Aligned_cols=90 Identities=17% Similarity=0.184 Sum_probs=59.1
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEcc-------------------CC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGD-------------------VL 65 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D-------------------~~ 65 (310)
+|-|+| -|.-|..++..|.+.+. .|..+.-+.. .. .+... .....+..+. ..
T Consensus 3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD-----~~-~L~~~-~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e 74 (198)
T d1rq2a1 3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTD-----AQ-ALLMS-DADVKLDVGRDSTRGLGAGADPEVGRKAAED 74 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESC-----HH-HHHHC-CCSEEEECCTTTC-----CCCHHHHHHHHHH
T ss_pred eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcch-----HH-HHhcC-CcchhhccccccccCCCcCcChhhhHhhHHH
Confidence 577888 68889999999999984 4665555522 11 11111 1112222221 13
Q ss_pred CHHHHHHHhcCCCEEEEcccchh---hhhHHHHHHHHHHcC
Q 021596 66 NHESLVNAIKQVDVVISTVGHAL---LADQVKIIAAIKEAG 103 (310)
Q Consensus 66 d~~~~~~~~~~~d~Vi~~a~~~~---~~~~~~~~~aa~~~~ 103 (310)
+.+.+.++++++|.||.+||... ...+--+.+.|++.+
T Consensus 75 ~~~~I~~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g 115 (198)
T d1rq2a1 75 AKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLG 115 (198)
T ss_dssp THHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcC
Confidence 56788889999999999998876 344455788899887
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.22 E-value=0.29 Score=40.71 Aligned_cols=91 Identities=13% Similarity=0.195 Sum_probs=55.4
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCC--------------CCchhhHh-Hhhh--cCC--cEEEEccC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLS--------------APSKSQLL-DHFK--NLG--VNFVVGDV 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~--------------~~~~~~~~-~~l~--~~~--~~~v~~D~ 64 (310)
++|||+|+ |.+|..+++.|...|. ++.+++.+.=.. ...|.+.+ +.+. .++ +..+..++
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i 116 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI 116 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence 58999995 7799999999999995 788887653110 01122221 1121 234 44555555
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHH
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIK 100 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~ 100 (310)
.+.. ...++++|+|+.+..... .-..+-+.|.
T Consensus 117 ~~~~--~~~~~~~DlVi~~~Dn~~--aR~~in~~c~ 148 (426)
T d1yovb1 117 QDFN--DTFYRQFHIIVCGLDSII--ARRWINGMLI 148 (426)
T ss_dssp GGBC--HHHHTTCSEEEECCSCHH--HHHHHHHHHH
T ss_pred cchH--HHHHHhcchheeccCcHH--HHHHHHHHHH
Confidence 4433 356789999999888653 2333334454
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=90.05 E-value=0.14 Score=40.30 Aligned_cols=33 Identities=27% Similarity=0.456 Sum_probs=29.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~ 38 (310)
.+|+|+| +|-+|..++..|.++|. +|.++.|+.
T Consensus 2 ~dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4799999 69999999999999995 799999874
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.93 E-value=0.18 Score=38.88 Aligned_cols=34 Identities=29% Similarity=0.205 Sum_probs=30.2
Q ss_pred CceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRES 38 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~ 38 (310)
+++|+|+| .|..|..++..|.+.| ++|.++-|++
T Consensus 1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 1 PIDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 47899999 5999999999999999 5899998874
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.84 E-value=0.2 Score=39.40 Aligned_cols=28 Identities=29% Similarity=0.328 Sum_probs=25.0
Q ss_pred cCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 12 GTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
.||..|.+++++++.+|++|+.+.+..+
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~s 71 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRARS 71 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 3789999999999999999999988754
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=89.71 E-value=0.8 Score=32.69 Aligned_cols=100 Identities=21% Similarity=0.216 Sum_probs=54.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC--CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG--HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVG 62 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~ 62 (310)
|||.|=| =|.||+.+.+.+++++ ..+.++.-+.... ++... ..|+.. .+. +...
T Consensus 2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~-~~~~a--yLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~ 77 (173)
T d1obfo1 2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGD-PKTNA--HLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVD 77 (173)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSC-HHHHH--HHHHEETTTEECSSCEEEETTEEEETTEEEEEE
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCC-hHHHH--HhhcccccCCCcCceEEeccceEEECCEEEEEE
Confidence 6899988 8999999999999764 2454454443321 22221 112111 111 1111
Q ss_pred cCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 63 D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.-.|++.+.=.-.++|+|+-|.|.+. +..-++.-.+.| +++++.|.
T Consensus 78 ~~~~p~~i~W~~~gvDiViEcTG~f~---~~~~a~~hl~~G-akkViiSA 123 (173)
T d1obfo1 78 ANRNPAQLPWGALKVDVVLECTGFFT---TKEKAGAHIKGG-AKKVIISA 123 (173)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCC---SHHHHHHHHHHT-CSEEEESS
T ss_pred ecCCHHHCcccccccceEEEeccccc---CHHHHHHHhccC-CcceEEec
Confidence 22344443322237999999999764 222222223447 89988753
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.67 E-value=0.19 Score=38.07 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=26.7
Q ss_pred CceEEEEccCcchhHHHHHHHHh-CCCCEEEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVK-AGHPTFVLV 35 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~-~g~~V~~~~ 35 (310)
.++|+|-| .|.+|+++++.|.+ .|.+|++++
T Consensus 31 g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 31 KATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 46899998 89999999999975 699988776
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=89.44 E-value=0.16 Score=38.75 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=29.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~ 38 (310)
++|+|+| +|.-|...+..|.++|+ +|+++-++.
T Consensus 1 P~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVG-AGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 4799999 69999999999999995 799998874
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=89.39 E-value=0.66 Score=32.97 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=54.8
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCC--------cE------------EEEccCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLG--------VN------------FVVGDVL 65 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~--------~~------------~v~~D~~ 65 (310)
||.|-| =|.||+.+.+.+++++.+|+++.-.. .+.......++... ++ +....-.
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~----~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~ 76 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPF----IALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEM 76 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTT----SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCC----cCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecC
Confidence 788887 89999999999999988877665321 11222222222111 11 1111223
Q ss_pred CHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 66 NHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 66 d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
+++++.=.-.++|+|+-|.|.+. +..-++.-.+.| +++++.|
T Consensus 77 ~p~~i~W~~~gvD~ViEcTG~f~---~~~~~~~hl~~g-akkViis 118 (169)
T d1dssg1 77 KPENIPWSKAGAEYIVESTGVFT---TIEKASAHFKGG-AKKVIIS 118 (169)
T ss_dssp SGGGCCHHHHTCCEEEECSSSCC---SHHHHGGGGTTT-CSEEEES
T ss_pred ChHHCCccccCCCEEEecCceEc---CHHHHHHHHhcC-CceEeec
Confidence 44443211238999999999764 222222222347 8898875
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.35 E-value=0.17 Score=40.28 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
..+|+|+| +|.-|...+..|.++|++|.++-++
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 46899999 6999999999999999999999765
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.82 E-value=0.47 Score=37.77 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=48.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhC-C-CCEEEEEcCCCCCCCchh-hHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA-G-HPTFVLVRESTLSAPSKS-QLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVV 80 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~V 80 (310)
..++.|+| +|.++...++.|... . .+|++.+|+. ++. .....+...++..... . .+++.++|+|
T Consensus 125 ~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~-----e~~~~~~~~~~~~~~~~~~~---~----~~a~~~aDiV 191 (320)
T d1omoa_ 125 SSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVRE-----KAAKKFVSYCEDRGISASVQ---P----AEEASRCDVL 191 (320)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSH-----HHHHHHHHHHHHTTCCEEEC---C----HHHHTSSSEE
T ss_pred ccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCH-----HHHHHHHHHHHhcCCccccc---h----hhhhccccEE
Confidence 36789998 899999999988763 3 4799999983 333 2334444445444321 1 2456789999
Q ss_pred EEcccchh
Q 021596 81 ISTVGHAL 88 (310)
Q Consensus 81 i~~a~~~~ 88 (310)
+.+.+...
T Consensus 192 ~taT~s~~ 199 (320)
T d1omoa_ 192 VTTTPSRK 199 (320)
T ss_dssp EECCCCSS
T ss_pred EEeccCcc
Confidence 98876543
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.46 E-value=0.48 Score=34.69 Aligned_cols=88 Identities=22% Similarity=0.236 Sum_probs=57.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCCCCCchhhHhHhhhcC--CcEEEEcc-------------------
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTLSAPSKSQLLDHFKNL--GVNFVVGD------------------- 63 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~l~~~--~~~~v~~D------------------- 63 (310)
+|.|+| -|.-|..++..|.+.+. .|..+.-+... +.|... ...+..++
T Consensus 3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~---------~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa 72 (198)
T d1ofua1 3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDA---------QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAA 72 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBT---------GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHH
T ss_pred eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcH---------HHHhcCCccceeccccccccCCCCCCChHHHHHHH
Confidence 688898 79999999999999984 35554444221 111111 11111111
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchh---hhhHHHHHHHHHHcC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHAL---LADQVKIIAAIKEAG 103 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~---~~~~~~~~~aa~~~~ 103 (310)
..+.+.+.++++++|.||.+||... ...+--+.+.|++.+
T Consensus 73 ~e~~~~I~~~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g 115 (198)
T d1ofua1 73 LEDRERISEVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMG 115 (198)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCCCccccHHHHHHHHHHHcC
Confidence 1256778888999999999998876 334445888888887
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.29 E-value=1.3 Score=29.53 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=53.5
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhc--CCCEEE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIK--QVDVVI 81 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~--~~d~Vi 81 (310)
..+|+|-|-||..|+.-+++.++.|.+|++-+....... ...++-+ .+++.++.+ ++|+=+
T Consensus 15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~----------~~~giPV-------f~tV~eA~~~~~~daSv 77 (130)
T d1euca1 15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK----------THLGLPV-------FNTVKEAKEQTGATASV 77 (130)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC----------EETTEEE-------ESSHHHHHHHHCCCEEE
T ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCc----------cccCccc-------hhhHHHHHHhcCCcEEE
Confidence 458999999999999999999999999887776533220 0112111 123334443 677766
Q ss_pred EcccchhhhhHHHHHHHHHHcCCccEEcc
Q 021596 82 STVGHALLADQVKIIAAIKEAGNVTRFFP 110 (310)
Q Consensus 82 ~~a~~~~~~~~~~~~~aa~~~~~v~~~v~ 110 (310)
-..++.. ....++||+. +| ++.+|.
T Consensus 78 IfVPp~~--a~dAi~EAi~-ag-I~liV~ 102 (130)
T d1euca1 78 IYVPPPF--AAAAINEAID-AE-VPLVVC 102 (130)
T ss_dssp ECCCHHH--HHHHHHHHHH-TT-CSEEEE
T ss_pred EecCHHH--HHHHHHHHHh-CC-CCEEEE
Confidence 6555432 3334555554 46 777665
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=88.09 E-value=0.33 Score=30.53 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=27.0
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
|||||+| +|.=-.+++..|.+..++|++.--|
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence 7999999 7777889999999888888877544
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.02 E-value=0.22 Score=35.19 Aligned_cols=31 Identities=19% Similarity=0.211 Sum_probs=26.7
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
||+|+| .|++|-.++..|. ++.+|+++.|..
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence 899999 6999999999885 578999998764
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.64 E-value=0.27 Score=32.06 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=29.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTL 40 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 40 (310)
.|+|+|.| +|.-|.-++..|.+.+-+|+...|+...
T Consensus 32 gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~~ 67 (107)
T d2gv8a2 32 GESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGGG 67 (107)
T ss_dssp TCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence 47999999 7999999999999888777777776443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=87.02 E-value=0.31 Score=40.15 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=26.0
Q ss_pred ceEEEEcc------Ccchh---HHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGG------TGYIG---KFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~Ga------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (310)
||||+++. +|.+| ..|++.|.++||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 78999774 36665 55789999999999998754
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.73 E-value=0.38 Score=41.26 Aligned_cols=98 Identities=14% Similarity=0.197 Sum_probs=59.3
Q ss_pred ceEEEEccCcchhHHHHHHHHhCCC-CEEEEEcCCCC--------------CCCchhhHh-Hhhh--cCCc--EEEEccC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAGH-PTFVLVRESTL--------------SAPSKSQLL-DHFK--NLGV--NFVVGDV 64 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~-~~l~--~~~~--~~v~~D~ 64 (310)
.+|+|+|+ |.+|..+++.|...|. ++++++.+.-. -...|++.+ +.+. .+.+ +.+..+
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~- 103 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES- 103 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC-
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC-
Confidence 58999995 7899999999999994 67777543210 001122211 1122 2333 334333
Q ss_pred CCHHHH----HHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEc
Q 021596 65 LNHESL----VNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFF 109 (310)
Q Consensus 65 ~d~~~~----~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v 109 (310)
++.+ .+.++++|+|+.+.... .....+-++|++.+ ++.+.
T Consensus 104 --~~~~~~~~~~~~~~~dvVv~~~~~~--~~~~~l~~~c~~~~-ip~i~ 147 (529)
T d1yova1 104 --PENLLDNDPSFFCRFTVVVATQLPE--STSLRLADVLWNSQ-IPLLI 147 (529)
T ss_dssp --HHHHHHSCGGGGGGCSEEEEESCCH--HHHHHHHHHHHHHT-CCEEE
T ss_pred --chhhhhhHHHHhcCCCEEEECCCCH--HHHHHHHHHHHHcC-CCEEE
Confidence 3332 23466899999876643 45566889999887 66554
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=86.56 E-value=2.2 Score=30.14 Aligned_cols=97 Identities=15% Similarity=0.095 Sum_probs=53.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCC---CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEc
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG---HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVG 62 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~ 62 (310)
||.|=| =|.||+.+.+.++++. .+|+++. .... ++... ..++.. .++ +...
T Consensus 2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaIN--d~~~-~e~~a--yLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~ 75 (169)
T d1hdgo1 2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIN--DLTD-TKTLA--HLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVF 75 (169)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEE--CSSC-HHHHH--HHHHCCTTTCCCSSCEEECSSEEEETTEEEEEE
T ss_pred EEEEEC-CChHHHHHHHHHHhccCCCEEEEEec--cCcc-HHHHH--HHHhccccccccCceEEEECCEEEECCEEEEEE
Confidence 788887 8999999999998753 4555443 2211 22221 112111 111 1111
Q ss_pred cCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 63 D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.-.+++.+.=.-.++|+|+-|.|.+. +..-++.-.+.| +++++.|.
T Consensus 76 ~~~~p~~i~W~~~gvD~ViEcTG~f~---t~~~~~~hl~~G-akkViiSA 121 (169)
T d1hdgo1 76 AEPDPSKLPWKDLGVDFVIESTGVFR---NREKAELHLQAG-AKKVIITA 121 (169)
T ss_dssp CCSSGGGSCHHHHTCCEEEECSSSCC---BHHHHTHHHHTT-CSEEEESS
T ss_pred eCCChhhCCccccCCCEEEEecceec---cccchhhhccCC-CceEEEec
Confidence 22345543211128999999999764 223333333457 99988753
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.43 E-value=0.35 Score=38.53 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=28.5
Q ss_pred EEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 7 ILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 7 IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
|+|+| +|.-|...+..|.++|++|+++-++.
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 78999 69999999999999999999998764
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=86.37 E-value=2 Score=30.43 Aligned_cols=100 Identities=19% Similarity=0.129 Sum_probs=52.8
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcCC--------cE------------EEE-c
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNLG--------VN------------FVV-G 62 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~~--------~~------------~v~-~ 62 (310)
|||.|-| =|.||+.+.+.++++. .++-++.-+.... .+... ..++... ++ .+. .
T Consensus 1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~-~~~~a--yLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~ 76 (172)
T d1rm4a1 1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGG-VKQAS--HLLKYDSILGTFDADVKTAGDSAISVDGKVIKVV 76 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTC-HHHHH--HHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCC-HHHHH--HHHhcCcccccccceeEecCCcceEECCEEEEEe
Confidence 5899988 8999999999988765 3343333333221 22221 1121110 10 011 1
Q ss_pred cCCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 63 DVLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 63 D~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
.-.|++.+.=.-.++|+|+-|.|.+. +..-++.-.+.| +++++.|.
T Consensus 77 ~~~~p~~i~W~~~gvDiViEcTG~f~---~~~~~~~hl~~G-akkViiSA 122 (172)
T d1rm4a1 77 SDRNPVNLPWGDMGIDLVIEGTGVFV---DRDGAGKHLQAG-AKKVLITA 122 (172)
T ss_dssp CCSCGGGSCHHHHTCCEEEECSSSCC---BHHHHHHHHHTT-CSCEEESS
T ss_pred cCCChHHCChhhcCCCEEEecCceEc---cHHHHHHHHhcC-CceEEeec
Confidence 22344443211128999999999864 112222222447 88988753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.30 E-value=0.26 Score=37.88 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=28.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEc
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVR 36 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R 36 (310)
.++|+|-| .|.+|+++++.|.+.|.+|++++-
T Consensus 36 g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 36 GKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp TCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 37899998 899999999999999999987754
|
| >d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Thermotoga maritima [TaxId: 2336]
Probab=86.29 E-value=2.2 Score=31.08 Aligned_cols=86 Identities=17% Similarity=0.155 Sum_probs=62.5
Q ss_pred EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh---hcCCcEEEEccCCCHHHHHHHhc-CCCEEEEc
Q 021596 8 LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF---KNLGVNFVVGDVLNHESLVNAIK-QVDVVIST 83 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~~ 83 (310)
+|.+.+---...+++.|++.|.++.=++-+. +.-.+.++.+ ..+++.+=.+-+.|.++++.+.+ |++.++.
T Consensus 14 vlr~~~~~~a~~~~~al~~~Gi~~iEitlr~----p~a~~~i~~l~~~~~~~~~vGaGTV~~~~~~~~a~~aGa~fivs- 88 (202)
T d1wa3a1 14 VLRANSVEEAKEKALAVFEGGVHLIEITFTV----PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFIVS- 88 (202)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCEEEEETTS----TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEEEC-
T ss_pred EEECCCHHHHHHHHHHHHHcCCCEEEEecCC----ccHHHHHHHHHHhcCCCcEEEecccccHHHHHHHHhhcccEEeC-
Confidence 3566667788899999999998877555443 3334444443 23677777889999999999988 8998873
Q ss_pred ccchhhhhHHHHHHHHHHcC
Q 021596 84 VGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 84 a~~~~~~~~~~~~~aa~~~~ 103 (310)
+ .....++++|.+.+
T Consensus 89 -P----~~~~~v~~~~~~~~ 103 (202)
T d1wa3a1 89 -P----HLDEEISQFCKEKG 103 (202)
T ss_dssp -S----SCCHHHHHHHHHHT
T ss_pred -C----CCcHHHHHHHHhcC
Confidence 1 22468999999987
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=86.25 E-value=0.34 Score=39.12 Aligned_cols=31 Identities=29% Similarity=0.279 Sum_probs=28.5
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (310)
-|+|+| +|+-|..++..|.+.|++|.++-|-
T Consensus 4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 378998 8999999999999999999999885
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=86.19 E-value=1.9 Score=32.21 Aligned_cols=85 Identities=14% Similarity=0.142 Sum_probs=45.4
Q ss_pred CceEEEEccC---cchhHHHHHHHHhC--CCCEEEEE-cCCCCCCCchhh-HhHhhhcCCcEEEEccCCCHHHHHHHhc-
Q 021596 4 KSKILSIGGT---GYIGKFIVEASVKA--GHPTFVLV-RESTLSAPSKSQ-LLDHFKNLGVNFVVGDVLNHESLVNAIK- 75 (310)
Q Consensus 4 ~~~IlI~Gat---G~iG~~l~~~L~~~--g~~V~~~~-R~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~~~~~~~- 75 (310)
+++|.|+|.. |+++..-+..+.+. +++|+++. ++ +++.+ ..+.+..+.... +.|.++ +++
T Consensus 16 ~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~-----~~~~~~~~~~~~~~~~~~----~~~~~~---l~~~ 83 (237)
T d2nvwa1 16 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPT-----LKSSLQTIEQLQLKHATG----FDSLES---FAQY 83 (237)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSC-----HHHHHHHHHHTTCTTCEE----ESCHHH---HHHC
T ss_pred CeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCC-----HHHHHHHHHhccccccee----ecchhh---cccc
Confidence 4689999963 34666556666654 46777654 43 22222 122221122221 234444 444
Q ss_pred -CCCEEEEcccchhhhhHHHHHHHHHHcC
Q 021596 76 -QVDVVISTVGHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 76 -~~d~Vi~~a~~~~~~~~~~~~~aa~~~~ 103 (310)
++|+|+.+++.. ....++.+|.++|
T Consensus 84 ~~iD~V~i~tp~~---~h~~~~~~al~aG 109 (237)
T d2nvwa1 84 KDIDMIVVSVKVP---EHYEVVKNILEHS 109 (237)
T ss_dssp TTCSEEEECSCHH---HHHHHHHHHHHHS
T ss_pred cccceeeccCCCc---chhhHHHHHHHhc
Confidence 689999988754 3444444554444
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=86.16 E-value=0.54 Score=31.08 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=27.9
Q ss_pred CceEEEEccCcchhHHHHHHHHhC---CCCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA---GHPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~---g~~V~~~~R~~~ 39 (310)
.++++|.| +|++|-.++..|.+. |.+|+++.|...
T Consensus 20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 47999999 599999999776654 457999998743
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.05 E-value=0.41 Score=37.68 Aligned_cols=32 Identities=19% Similarity=0.439 Sum_probs=29.6
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVRES 38 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (310)
.|+|+| .|..|..++..|.+.|.+|+++.++.
T Consensus 9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 699999 59999999999999999999999874
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.96 E-value=0.36 Score=33.03 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=28.2
Q ss_pred ceEEEEccCcchhHHHHHHHH----hCCCCEEEEEcCCC
Q 021596 5 SKILSIGGTGYIGKFIVEASV----KAGHPTFVLVREST 39 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~----~~g~~V~~~~R~~~ 39 (310)
++|+|.| +|++|-.++..|. +.|.+|+.+.+...
T Consensus 38 k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 38 KSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 6899998 5999999998885 45789999988753
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=85.35 E-value=0.31 Score=37.21 Aligned_cols=38 Identities=26% Similarity=0.333 Sum_probs=32.9
Q ss_pred CCCCceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 1 MASKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 1 M~~~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
|+...-|+|+| .|--|...+-.|.++|++|.++.++..
T Consensus 1 M~~~~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 1 MSQYSENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp CEEECSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCcEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 66445699999 699999999999999999999999853
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.34 E-value=0.38 Score=36.00 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=29.1
Q ss_pred ceEEEEccCcchhHHHHHHHHhC--CCCEEEEEcCC
Q 021596 5 SKILSIGGTGYIGKFIVEASVKA--GHPTFVLVRES 38 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~--g~~V~~~~R~~ 38 (310)
++|+|+| +|--|...+.+|.+. |++|+++.+.+
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~ 36 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQL 36 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6999999 699999999999875 68999998874
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=85.25 E-value=2.3 Score=29.89 Aligned_cols=97 Identities=19% Similarity=0.164 Sum_probs=53.2
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEccC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVGDV 64 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~D~ 64 (310)
||.|=| =|.||+.+.+.++++. .+|.++ +.+..+++...+ .++.. .++ +....-
T Consensus 2 kigING-fGRIGR~v~R~~~~~~~~~iv~I--Nd~~~d~~~~ay--LlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~ 76 (166)
T d2b4ro1 2 KLGING-FGRIGRLVFRAAFGRKDIEVVAI--NDPFMDLNHLCY--LLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAE 76 (166)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCSSEEEEEE--ECTTCCHHHHHH--HHHCCTTTCSCSSCEEEETTEEEESSCEEEEECC
T ss_pred eEEEEC-CCHHHHHHHHHHhhCCCcEEEEE--CCCCCChHHhhh--hhhcccccccceeeeccCCceEEecCcEEEEEeC
Confidence 677777 7999999999999864 455444 322211222211 12111 011 111122
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
.|++.+.=.-.++|+|+-|.|.+. +...++.-.+.| +++++.|
T Consensus 77 ~~p~~i~W~~~gvdiViEcTG~f~---~~~~~~~hl~~g-akkViiS 119 (166)
T d2b4ro1 77 KDPSQIPWGKCQVDVVCESTGVFL---TKELASSHLKGG-AKKVIMS 119 (166)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCC---SHHHHTHHHHTT-CSEEEES
T ss_pred CChHHccccccCCCEEEEeccccc---chhhhhhhhccC-CCEEEEe
Confidence 344443211228999999999764 333333444567 9998875
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=84.04 E-value=1.5 Score=31.43 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=49.6
Q ss_pred cCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHh--cCCCEEEEcccchh
Q 021596 12 GTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAI--KQVDVVISTVGHAL 88 (310)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~--~~~d~Vi~~a~~~~ 88 (310)
+|=.-|.|. +.+++++-+|++++|+ +......+....+++.++..++.+.+.....+ +++|.|+.-.|...
T Consensus 25 ~T~G~GGhs-~~iL~~~~~viaiD~D-----~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs 97 (182)
T d1wg8a2 25 ATLGGAGHA-RGILERGGRVIGLDQD-----PEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS 97 (182)
T ss_dssp TTCTTSHHH-HHHHHTTCEEEEEESC-----HHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred eCCCCcHHH-HHHhcccCcEEEEhhh-----hhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence 444445564 5556666789999999 55555555556678999999998877665443 36898888777654
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=83.29 E-value=0.61 Score=35.14 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=29.8
Q ss_pred eEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAGHPTFVLVREST 39 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (310)
-|+|+| +|-.|...+..|.++|++|.++.++..
T Consensus 4 DViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 489999 699999999999999999999998743
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=83.14 E-value=2.8 Score=30.09 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=52.1
Q ss_pred CceEEEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhh-hc---CCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHF-KN---LGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l-~~---~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
..+||=+| +| .|. .+..|.++|++|++++-+ +...+.++.. .. .++++...|+.+..- -...|+
T Consensus 31 ~grvLDiG-cG-~G~-~~~~la~~g~~v~gvD~s-----~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~ 98 (198)
T d2i6ga1 31 PGRTLDLG-CG-NGR-NSLYLAANGYDVTAWDKN-----PASMANLERIKAAEGLDNLQTDLVDLNTLTF----DGEYDF 98 (198)
T ss_dssp SCEEEEET-CT-TSH-HHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCTTEEEEECCTTTCCC----CCCEEE
T ss_pred CCcEEEEC-CC-CCH-HHHHHHHHhhhhccccCc-----HHHHHHHHHHhhhccccchhhhheecccccc----cccccE
Confidence 35899998 45 565 445777899999999887 3333332222 22 346777788765331 125799
Q ss_pred EEEcccchhh--hhHHHHHHHHHHc
Q 021596 80 VISTVGHALL--ADQVKIIAAIKEA 102 (310)
Q Consensus 80 Vi~~a~~~~~--~~~~~~~~aa~~~ 102 (310)
|+.......+ .....+++.+.+.
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~~~~~ 123 (198)
T d2i6ga1 99 ILSTVVMMFLEAQTIPGLIANMQRC 123 (198)
T ss_dssp EEEESCGGGSCTTHHHHHHHHHHHT
T ss_pred EEEeeeeecCCHHHHHHHHHHHHHH
Confidence 8876655442 2334555555543
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=82.95 E-value=4.2 Score=29.76 Aligned_cols=92 Identities=16% Similarity=0.254 Sum_probs=55.3
Q ss_pred ceEEEEccCcc---hhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTGY---IGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG~---iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
.+|+|+-|.|. =|-.+++.|.++|++|.++....... ++.......+...+...+.. .++ ..+.+.|+||
T Consensus 41 ~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~dlII 113 (211)
T d2ax3a2 41 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKT-PDCEYNYGLYKKFGGKVVEQ--FEP----SILNEFDVVV 113 (211)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCC-HHHHHHHHHHHHTTCCEESC--CCG----GGGGGCSEEE
T ss_pred CcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCC-cHHHHHHHHHHHcCCccccc--ccc----ccccCceEEE
Confidence 57888777765 56678999999999998887654332 22222222233334333321 121 1345789999
Q ss_pred Ecccchh-----hhhHHHHHHHHHHcC
Q 021596 82 STVGHAL-----LADQVKIIAAIKEAG 103 (310)
Q Consensus 82 ~~a~~~~-----~~~~~~~~~aa~~~~ 103 (310)
.+.=-.. ......+++.+.+.+
T Consensus 114 Dal~G~Gl~~~l~~~~~~~i~~iN~~~ 140 (211)
T d2ax3a2 114 DAIFGTGLRGEITGEYAEIINLVNKSG 140 (211)
T ss_dssp EESCCTTCCSCCCHHHHHHHHHHHHSC
T ss_pred EecccCCccccchHHHHHHHHHHHhhc
Confidence 9763222 445667888888776
|
| >d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Escherichia coli [TaxId: 562]
Probab=82.76 E-value=7 Score=28.53 Aligned_cols=86 Identities=14% Similarity=0.083 Sum_probs=60.1
Q ss_pred EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-CCCEEEEcc
Q 021596 8 LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK-QVDVVISTV 84 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~~a 84 (310)
+|.+-+---+..+++.|.+.|.++.-++-+. +.-.+.++.+. .+++.+-.|-+.+.++++.+.+ |++.++.=
T Consensus 20 vlr~~~~~~a~~~~~al~~~Gi~~iEitl~t----p~a~~~I~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivSP- 94 (213)
T d1wbha1 20 VIVVKKLEHAVPMAKALVAGGVRVLNVTLRT----ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP- 94 (213)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEESCS----TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES-
T ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEEeCCC----hhHHHHHHHHHHHCCCCeeeccccccHHHHHHHHHCCCcEEECC-
Confidence 4555566788889999999998777665543 22334444443 2567777788889988888887 88887763
Q ss_pred cchhhhhHHHHHHHHHHcC
Q 021596 85 GHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~ 103 (310)
.....++++|++.+
T Consensus 95 -----~~~~~v~~~a~~~~ 108 (213)
T d1wbha1 95 -----GLTEPLLKAATEGT 108 (213)
T ss_dssp -----SCCHHHHHHHHHSS
T ss_pred -----CCCHHHHHHHHhcC
Confidence 23457888888876
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=82.39 E-value=2.2 Score=30.20 Aligned_cols=96 Identities=22% Similarity=0.203 Sum_probs=52.0
Q ss_pred eEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEccC
Q 021596 6 KILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVGDV 64 (310)
Q Consensus 6 ~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~D~ 64 (310)
+|.|-| =|.||+.+.+.++++. .+|.++. .... ++.. ...++.. .++ +....-
T Consensus 3 kIgING-fGRIGR~v~R~~l~~~~~~ivaIN--d~~d-~~~~--ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~ 76 (171)
T d3cmco1 3 KVGING-FGRIGRNVFRAALKNPDIEVVAVN--DLTD-ANTL--AHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAE 76 (171)
T ss_dssp EEEEES-CSHHHHHHHHHHTTCTTEEEEEEE--CSSC-HHHH--HHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEc--CCCC-HHHH--hhhhcccccCCcccccccccCCCEEeCCcceeeEec
Confidence 788887 7999999999999874 4454443 2221 2211 1112111 111 111222
Q ss_pred CCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccC
Q 021596 65 LNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPS 111 (310)
Q Consensus 65 ~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s 111 (310)
.|++++.=.-.++|+|+-|.|.+. +..-++.-.+.| +++++.|
T Consensus 77 ~~p~~i~W~~~~vDiViEcTG~f~---t~~~~~~hl~~g-akkViiS 119 (171)
T d3cmco1 77 RDPENLAWGEIGVDIVVESTGRFT---KREDAAKHLEAG-AKKVIIS 119 (171)
T ss_dssp SSGGGCCTGGGTCCEEEECSSSCC---BHHHHTHHHHTT-CSEEEES
T ss_pred CCHHHccccccCCcEEEEecCccC---CHHHHHHHHhCC-CceEEEe
Confidence 344432211227999999999764 222222223447 8998875
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=82.38 E-value=0.57 Score=34.44 Aligned_cols=31 Identities=23% Similarity=0.256 Sum_probs=24.0
Q ss_pred ceEEEEccCcchhHH-----HHHHHHhCCCCEEEEE
Q 021596 5 SKILSIGGTGYIGKF-----IVEASVKAGHPTFVLV 35 (310)
Q Consensus 5 ~~IlI~GatG~iG~~-----l~~~L~~~g~~V~~~~ 35 (310)
|+++|+|....+|+- |+..|.++|++|.++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 789999943377764 6678888999998875
|
| >d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Flavoproteins family: Flavodoxin-related domain: ROO-like flavoprotein TM0755, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=82.34 E-value=1.7 Score=29.67 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=53.5
Q ss_pred ceEEEE-----ccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCE
Q 021596 5 SKILSI-----GGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDV 79 (310)
Q Consensus 5 ~~IlI~-----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~ 79 (310)
.+|+|+ |-|-.+...+++.|-+.|++|.+..-.. .|..+...+..-+.++|.
T Consensus 4 ~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~-----------------------~~~~~~~~~~~~l~~~d~ 60 (148)
T d1vmea1 4 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSD-----------------------EERPAISEILKDIPDSEA 60 (148)
T ss_dssp TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECS-----------------------SCCCCHHHHHHHSTTCSE
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEeccc-----------------------ccccchhHhhhhHHHCCE
Confidence 466663 4455678888888888888877665441 233455555566778999
Q ss_pred EEEcccchh---hhhHHHHHHHHHHc---CCccEEccCCCCC
Q 021596 80 VISTVGHAL---LADQVKIIAAIKEA---GNVTRFFPSEFGN 115 (310)
Q Consensus 80 Vi~~a~~~~---~~~~~~~~~aa~~~---~~v~~~v~s~~~~ 115 (310)
++..++... ......+++..... + .+..++.+|+.
T Consensus 61 iiigspt~~~~~~~~~~~~l~~~~~~~~~~-k~~~~fgs~g~ 101 (148)
T d1vmea1 61 LIFGVSTYEAEIHPLMRFTLLEIIDKANYE-KPVLVFGVHGW 101 (148)
T ss_dssp EEEEECEETTEECHHHHHHHHHHHHHCCCC-CEEEEEEECCC
T ss_pred eEEEecccCCccCchHHHHHHHHhhcccCC-CEEEEEEcCCC
Confidence 998887655 23344555544432 3 33355666664
|
| >d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Flavoproteins family: NADPH-dependent FMN reductase domain: Hypothetical protein Ylr011wp species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.25 E-value=0.84 Score=32.90 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=24.6
Q ss_pred HHHHHHhcCCCEEEEcccchh---hhhHHHHHHHHHH
Q 021596 68 ESLVNAIKQVDVVISTVGHAL---LADQVKIIAAIKE 101 (310)
Q Consensus 68 ~~~~~~~~~~d~Vi~~a~~~~---~~~~~~~~~aa~~ 101 (310)
..+.+.++.+|.||..++... ....++++|.+.+
T Consensus 76 ~~~~~~i~~AD~iIi~tP~Y~~~~~~~lK~~iD~~~~ 112 (185)
T d1t0ia_ 76 RSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRLYH 112 (185)
T ss_dssp HHHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHTCST
T ss_pred HHHHHHHHhCCCeEEEEeeecCCCcHHHHHHHHHhhH
Confidence 345566778999999888655 5567888887643
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=81.75 E-value=2.5 Score=29.77 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=53.5
Q ss_pred ceEEEEccCcchhHHHHHHHHhCC-CCEEEEEcCCCCCCCchhhHhHhhhcC--------CcE------------EEEcc
Q 021596 5 SKILSIGGTGYIGKFIVEASVKAG-HPTFVLVRESTLSAPSKSQLLDHFKNL--------GVN------------FVVGD 63 (310)
Q Consensus 5 ~~IlI~GatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~l~~~--------~~~------------~v~~D 63 (310)
-+|.|=| =|.||+.+.+.+++++ .+|.++.- ...+++.. ...++.. .++ +....
T Consensus 2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd--~~~~~~~~--ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~ 76 (169)
T d1u8fo1 2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAIND--PFIDLNYM--VYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQ 76 (169)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEC--SSSCHHHH--HHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecC--CCccHHHH--HHHHhhccccCCcCCeEEEECCEEEECCEEEEEEE
Confidence 4889988 8999999999998875 56655532 11112222 1222211 111 11112
Q ss_pred CCCHHHHHHHhcCCCEEEEcccchhhhhHHHHHHHHHHcCCccEEccCC
Q 021596 64 VLNHESLVNAIKQVDVVISTVGHALLADQVKIIAAIKEAGNVTRFFPSE 112 (310)
Q Consensus 64 ~~d~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~aa~~~~~v~~~v~s~ 112 (310)
-.+++.+.=.-.++|+|+-|.|.+. +..-++.-...| +++++.|.
T Consensus 77 ~~~p~~i~W~~~~vDiViEcTG~f~---~~~~~~~hl~~g-akkViiSa 121 (169)
T d1u8fo1 77 ERDPSKIKWGDAGAEYVVESTGVFT---TMEKAGAHLQGG-AKRVIISA 121 (169)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCC---SHHHHGGGGGGT-CSEEEESS
T ss_pred CCChhhCCccccCCCEEEEecceec---cHHHHHHHHhcC-CceEeecc
Confidence 2344433211127999999999864 222222222447 89988753
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.73 E-value=2 Score=31.70 Aligned_cols=36 Identities=17% Similarity=0.334 Sum_probs=29.2
Q ss_pred CceEEEEccCcchhHHHHHHHH--------------------hCC-CCEEEEEcCCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASV--------------------KAG-HPTFVLVRESTL 40 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~--------------------~~g-~~V~~~~R~~~~ 40 (310)
.++|+|+| .|+++.-+++.|+ +.| .+|+++.|+...
T Consensus 39 gk~VvVIG-gGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~ 95 (216)
T d1lqta1 39 GARAVVIG-NGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 95 (216)
T ss_dssp SSEEEEEC-CSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CceEEEEC-CCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence 47999999 6999999999887 455 469999998543
|
| >d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Pseudomonas putida [TaxId: 303]
Probab=81.49 E-value=7.3 Score=28.51 Aligned_cols=86 Identities=12% Similarity=0.053 Sum_probs=56.3
Q ss_pred EEEccCcchhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhh--cCCcEEEEccCCCHHHHHHHhc-CCCEEEEcc
Q 021596 8 LSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFK--NLGVNFVVGDVLNHESLVNAIK-QVDVVISTV 84 (310)
Q Consensus 8 lI~GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~~~~~~~-~~d~Vi~~a 84 (310)
+|.+.+--....+++.|.+.|.++.=++-+. +.-.+.++.+. .+++.+=.|-+.+.++++.+.+ |++.++.=
T Consensus 22 vl~~~~~~~a~~~~~al~~~Gi~~iEitl~~----p~a~~~i~~l~~~~p~~~vGaGTV~~~~~~~~a~~aGa~FivsP- 96 (216)
T d1mxsa_ 22 VITIAREEDILPLADALAAGGIRTLEVTLRS----QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTP- 96 (216)
T ss_dssp EECCSCGGGHHHHHHHHHHTTCCEEEEESSS----THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECS-
T ss_pred EEECCCHHHHHHHHHHHHHCCCCEEEEeCCC----hhHHHHHHHHHHhCCCcceeeeeeecHHHHHHHHhCCCCEEECC-
Confidence 3445556677888888888887766555442 33344444443 2567777788888888888876 77776652
Q ss_pred cchhhhhHHHHHHHHHHcC
Q 021596 85 GHALLADQVKIIAAIKEAG 103 (310)
Q Consensus 85 ~~~~~~~~~~~~~aa~~~~ 103 (310)
.....++++|++.+
T Consensus 97 -----~~~~~v~~~a~~~~ 110 (216)
T d1mxsa_ 97 -----GITEDILEAGVDSE 110 (216)
T ss_dssp -----SCCHHHHHHHHHCS
T ss_pred -----CCcHHHHHHHHhcC
Confidence 23457788888876
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=81.34 E-value=1.8 Score=32.19 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=28.7
Q ss_pred CceEEEEccCcchhHHHHHHHHhC--------------------C-CCEEEEEcCCC
Q 021596 4 KSKILSIGGTGYIGKFIVEASVKA--------------------G-HPTFVLVREST 39 (310)
Q Consensus 4 ~~~IlI~GatG~iG~~l~~~L~~~--------------------g-~~V~~~~R~~~ 39 (310)
-++|+|+| .|+++.=+++.|++. | .+|+++.|+..
T Consensus 39 gk~VvVIG-gGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~ 94 (225)
T d1cjca1 39 CDTAVILG-QGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 94 (225)
T ss_dssp SSEEEEES-CSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CceEEEEC-CchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcCh
Confidence 37899998 799999999999984 5 46888888753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=80.85 E-value=0.71 Score=36.50 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=23.0
Q ss_pred ceEEEEcc-Cc-ch--hHHHHHHHHhCCCCEEEEEcC
Q 021596 5 SKILSIGG-TG-YI--GKFIVEASVKAGHPTFVLVRE 37 (310)
Q Consensus 5 ~~IlI~Ga-tG-~i--G~~l~~~L~~~g~~V~~~~R~ 37 (310)
|||+|++| || -+ +..|+++|.++||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 57888764 32 22 224789999999999887754
|
| >d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein YNL200c (YNU0 YEAST) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.53 E-value=2.6 Score=31.73 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=56.3
Q ss_pred ceEEEEccCc---chhHHHHHHHHhCCCCEEEEEcCCCCCCCchhhHhHhhhcCCcEEEEccCCCHHHHHHHhcCCCEEE
Q 021596 5 SKILSIGGTG---YIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKNLGVNFVVGDVLNHESLVNAIKQVDVVI 81 (310)
Q Consensus 5 ~~IlI~GatG---~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~~~~~~~~~d~Vi 81 (310)
++|+|+-|.| .=|-.+++.|.++|++|.++....+............+...+..+...+-.+.... ....+.|+||
T Consensus 56 ~~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~iV 134 (243)
T d1jzta_ 56 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEY-LKPEKTLCIV 134 (243)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEECSSTTCGGGG-GSTTTEEEEE
T ss_pred CeEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHHCCCceecccccchhhc-cccccccEEE
Confidence 4677765554 56678999999999999888765443212222233334445665555443332211 1134678898
Q ss_pred Ecccchh-----hhhHHHHHHHHHHcC
Q 021596 82 STVGHAL-----LADQVKIIAAIKEAG 103 (310)
Q Consensus 82 ~~a~~~~-----~~~~~~~~~aa~~~~ 103 (310)
.+.=-.. ......+++.+.+..
T Consensus 135 Dal~G~Gl~~~l~~~~~~li~~iN~~~ 161 (243)
T d1jzta_ 135 DAIFGFSFKPPMREPFKGIVEELCKVQ 161 (243)
T ss_dssp EESCCTTCCSSCCTTHHHHHHHHHHHT
T ss_pred EeeecccccCcccHHHHHHHHHHHHhC
Confidence 8653222 334567777776543
|