Citrus Sinensis ID: 021602

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDEVSLLYSNAFLMNTKWQSP
cccccccccccccccHHHHHHHHHHccccccEEEEEccccccHHcHHHHHHHHHHccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEcccHHcccccccEEEEEcccHHHHHHHccccccccccccccccccccccccccccccccccccHHHccccHHHHHHHHccc
cccccccccccccccHHHHHHHHHHHccccEEEEEEEcccccHccHHHHHHHHHHcccEEEEEEEcccEEEcccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEEEEEccccccccccccEcccccEEEEEEEccccccEEcccccHHHHHHHHHHHHHHccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEccHEEEHHHcccEEEEEEccHHHHHHHccccccccEEccccccccccccccccccccccccccEEEEHHHHHHHccccccc
mltaaicgdvfasppvdsilaGIHAVTGPMGCLLIVTNytgdrlnfGLAAeqaksegyKVEIVIVgddcalppprgiagrrglAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVctlpgqvtsdrlgpgkmelglgihgepgaavadlqpVDVVVSHVLKQILStetnyvpitrgNRVVLMINGLGATPVMELMIAAGkavpnlqlehglAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLdattkaphwpvgvdgnrppakipvpmppshsmksdevSLLYSNAFLMNTKWQSP
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQIlstetnyvpitrgnRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDAttkaphwpvgvdgnrppAKIPVPMPPSHSMKSDEVSLLYSNAFLMNTKWQSP
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIagaaaaaglsladvaaeaKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDEVSLLYSNAFLMNTKWQSP
***AAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGV*************************LLYSNAFLM*******
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDG***************************NAFLMNTKWQ**
MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPM********DEVSLLYSNAFLMNTKWQSP
***AAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDEVSLLYSNAFLMNTKWQ**
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MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDEVSLLYSNAFLMNTKWQSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query310 2.2.26 [Sep-21-2011]
O04059 594 Putative 3,4-dihydroxy-2- N/A no 0.941 0.491 0.890 1e-148
Q8VC30 578 Bifunctional ATP-dependen yes no 0.912 0.489 0.458 3e-59
Q4KLZ6 578 Bifunctional ATP-dependen yes no 0.851 0.456 0.483 5e-59
F1RKQ4 579 Bifunctional ATP-dependen yes no 0.851 0.455 0.468 9e-58
Q3LXA3 575 Bifunctional ATP-dependen yes no 0.851 0.459 0.457 1e-56
Q58DK4 578 Bifunctional ATP-dependen yes no 0.851 0.456 0.464 1e-56
P45510 552 Dihydroxyacetone kinase O N/A no 0.848 0.476 0.473 1e-54
O74192 608 Dihydroxyacetone kinase O yes no 0.854 0.435 0.397 4e-46
O74215 591 Dihydroxyacetone kinase 2 yes no 0.851 0.446 0.4 1e-45
P43550 591 Dihydroxyacetone kinase 2 yes no 0.851 0.446 0.413 7e-45
>sp|O04059|DHBK_SOLLC Putative 3,4-dihydroxy-2-butanone kinase OS=Solanum lycopersicum GN=DHBK PE=2 SV=1 Back     alignment and function desciption
 Score =  525 bits (1352), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/292 (89%), Positives = 277/292 (94%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           MLTAAICGDVFASP VDSILAGI AVTGPMGCLLIV NYTGDRLNFGLAAEQAKSEGYKV
Sbjct: 77  MLTAAICGDVFASPNVDSILAGIRAVTGPMGCLLIVKNYTGDRLNFGLAAEQAKSEGYKV 136

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E+VIVGDDCALPPPRGIAGRRGLAGT+LV+K+AGAAAA GL LADVAAEAKRASEMVGTM
Sbjct: 137 EMVIVGDDCALPPPRGIAGRRGLAGTLLVHKVAGAAAACGLPLADVAAEAKRASEMVGTM 196

Query: 121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
           GVALSVCT PGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLK+ILS ETN
Sbjct: 197 GVALSVCTSPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKEILSPETN 256

Query: 181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
           YVPITRG+RVVL+INGLGATP+MELMI AGKAVP LQLEHGLAV+RVYTGSFMTSLDMAG
Sbjct: 257 YVPITRGSRVVLLINGLGATPLMELMIIAGKAVPELQLEHGLAVDRVYTGSFMTSLDMAG 316

Query: 241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDE 292
           FSIS+MKAD+ IL  LDA TKAP+WPVG +GNRPPAKIPVP+PPSHS+K ++
Sbjct: 317 FSISVMKADQAILDRLDAPTKAPNWPVGAEGNRPPAKIPVPLPPSHSIKIEK 368

Solanum lycopersicum (taxid: 4081)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: -
>sp|Q8VC30|DHAK_MOUSE Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Mus musculus GN=Dak PE=2 SV=1 Back     alignment and function description
>sp|Q4KLZ6|DHAK_RAT Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Rattus norvegicus GN=Dak PE=1 SV=1 Back     alignment and function description
>sp|F1RKQ4|DHAK_PIG Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Sus scrofa GN=DAK PE=1 SV=2 Back     alignment and function description
>sp|Q3LXA3|DHAK_HUMAN Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Homo sapiens GN=DAK PE=1 SV=2 Back     alignment and function description
>sp|Q58DK4|DHAK_BOVIN Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) OS=Bos taurus GN=DAK PE=2 SV=1 Back     alignment and function description
>sp|P45510|DHAK_CITFR Dihydroxyacetone kinase OS=Citrobacter freundii GN=dhaK PE=1 SV=3 Back     alignment and function description
>sp|O74192|DAK_PICPA Dihydroxyacetone kinase OS=Komagataella pastoris GN=DAK PE=3 SV=1 Back     alignment and function description
>sp|O74215|DAK2_SCHPO Dihydroxyacetone kinase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dak2 PE=3 SV=2 Back     alignment and function description
>sp|P43550|DAK2_YEAST Dihydroxyacetone kinase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAK2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
224125748 595 predicted protein [Populus trichocarpa] 0.941 0.490 0.890 1e-147
350538091 594 putative 3,4-dihydroxy-2-butanone kinase 0.941 0.491 0.890 1e-146
225471001 594 PREDICTED: putative 3,4-dihydroxy-2-buta 0.941 0.491 0.910 1e-143
224120380 595 predicted protein [Populus trichocarpa] 0.941 0.490 0.893 1e-143
255586153 585 Dihydroxyacetone kinase, putative [Ricin 0.941 0.499 0.893 1e-142
356520687 592 PREDICTED: putative 3,4-dihydroxy-2-buta 0.941 0.493 0.866 1e-139
356531116 592 PREDICTED: putative 3,4-dihydroxy-2-buta 0.941 0.493 0.859 1e-139
297834694 595 dihydroxyacetone kinase family protein [ 0.941 0.490 0.873 1e-138
224030847 594 unknown [Zea mays] gi|414872499|tpg|DAA5 0.945 0.493 0.819 1e-135
226509698 594 3,4-dihydroxy-2-butanone kinase [Zea may 0.945 0.493 0.819 1e-135
>gi|224125748|ref|XP_002329708.1| predicted protein [Populus trichocarpa] gi|222870616|gb|EEF07747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 260/292 (89%), Positives = 274/292 (93%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           ML+AAICG+VF SP VD+IL+GI AVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV
Sbjct: 77  MLSAAICGEVFTSPQVDAILSGIRAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 136

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E VIVGDDCALPP RGI GRRGLAGTILVNKIAGAAAA GLSL +VAAEAKRASEMVGTM
Sbjct: 137 ETVIVGDDCALPPLRGIVGRRGLAGTILVNKIAGAAAATGLSLDEVAAEAKRASEMVGTM 196

Query: 121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
           GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPV+VVVSHVL+QILS + N
Sbjct: 197 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVEVVVSHVLQQILSPDRN 256

Query: 181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
           YVPIT GNRVVL++NGLGATP MELMI AGKAVP LQLEHGLAV+RVYTGSFMTSLDMAG
Sbjct: 257 YVPITPGNRVVLLVNGLGATPAMELMIVAGKAVPQLQLEHGLAVDRVYTGSFMTSLDMAG 316

Query: 241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDE 292
           FSISIMKADE IL+ LDA+TKAPHWPVGVDGNRPPAKIPVP+P SHS KSDE
Sbjct: 317 FSISIMKADEAILQRLDASTKAPHWPVGVDGNRPPAKIPVPLPLSHSGKSDE 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|350538091|ref|NP_001234326.1| putative 3,4-dihydroxy-2-butanone kinase [Solanum lycopersicum] gi|7387627|sp|O04059.1|DHBK_SOLLC RecName: Full=Putative 3,4-dihydroxy-2-butanone kinase gi|1929056|emb|CAA72805.1| putative 3,4-dihydroxy-2-butanone kinase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|225471001|ref|XP_002270550.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Vitis vinifera] gi|297742797|emb|CBI35477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224120380|ref|XP_002318315.1| predicted protein [Populus trichocarpa] gi|222858988|gb|EEE96535.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255586153|ref|XP_002533737.1| Dihydroxyacetone kinase, putative [Ricinus communis] gi|223526353|gb|EEF28649.1| Dihydroxyacetone kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356520687|ref|XP_003528992.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase [Glycine max] Back     alignment and taxonomy information
>gi|356531116|ref|XP_003534124.1| PREDICTED: putative 3,4-dihydroxy-2-butanone kinase-like [Glycine max] Back     alignment and taxonomy information
>gi|297834694|ref|XP_002885229.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297331069|gb|EFH61488.1| dihydroxyacetone kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224030847|gb|ACN34499.1| unknown [Zea mays] gi|414872499|tpg|DAA51056.1| TPA: 3,4-dihydroxy-2-butanone kinase [Zea mays] Back     alignment and taxonomy information
>gi|226509698|ref|NP_001148575.1| 3,4-dihydroxy-2-butanone kinase [Zea mays] gi|195620526|gb|ACG32093.1| 3,4-dihydroxy-2-butanone kinase [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
TAIR|locus:2089784 595 AT3G17770 [Arabidopsis thalian 0.941 0.490 0.818 7.2e-123
TAIR|locus:2007680 593 AT1G48430 [Arabidopsis thalian 0.938 0.490 0.784 1.8e-119
ZFIN|ZDB-GENE-060929-652 576 dak "dihydroxyacetone kinase 2 0.851 0.458 0.453 5.3e-56
MGI|MGI:2385084 578 Dak "dihydroxyacetone kinase 2 0.906 0.486 0.441 1.5e-53
RGD|1311026 578 Dak "dihydroxyacetone kinase 2 0.851 0.456 0.460 3.8e-53
UNIPROTKB|F1RKQ4 579 DAK "Bifunctional ATP-dependen 0.906 0.485 0.427 6.3e-53
UNIPROTKB|Q58DK4 578 DAK "Bifunctional ATP-dependen 0.941 0.505 0.415 4.4e-52
UNIPROTKB|A0JN77 578 DAK "Dihydroxyacetone kinase 2 0.941 0.505 0.415 9.2e-52
UNIPROTKB|F1Q0K5 578 DAK "Uncharacterized protein" 0.945 0.506 0.402 5.1e-51
UNIPROTKB|H0YCY6 533 DAK "FAD-AMP lyase (cyclizing) 0.922 0.536 0.407 5.1e-51
TAIR|locus:2089784 AT3G17770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
 Identities = 239/292 (81%), Positives = 252/292 (86%)

Query:     1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
             MLTAAICGDVFASPPVDSILAGI AVTG  GCLLIV NYTGDRLNFGLAAEQAKSEGYKV
Sbjct:    77 MLTAAICGDVFASPPVDSILAGIRAVTGTEGCLLIVKNYTGDRLNFGLAAEQAKSEGYKV 136

Query:    61 EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIXXXXXXXXXXXXXXXXXXKRASEMVGTM 120
             E VIVG+DCALPPPRGIAGRRGLAGT+LV+K+                  K ASEMVGTM
Sbjct:   137 ETVIVGEDCALPPPRGIAGRRGLAGTVLVHKVAGAAAAAGLSLEKVAAEAKCASEMVGTM 196

Query:   121 GVALSVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTETN 180
             GVALSVCTLPGQVTSDRLG  KMELGLGIHGEPGAAV D++PVDVVVSHVL+QILS ETN
Sbjct:   197 GVALSVCTLPGQVTSDRLGAQKMELGLGIHGEPGAAVVDVEPVDVVVSHVLQQILSPETN 256

Query:   181 YVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMAG 240
             YVPITRGNRVVLM+NGLG TP+MELMIAAGKAVP LQLE GLAV+RVYTG FMTSLDMAG
Sbjct:   257 YVPITRGNRVVLMVNGLGGTPLMELMIAAGKAVPKLQLEFGLAVDRVYTGFFMTSLDMAG 316

Query:   241 FSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSDE 292
             FSISIMKAD  IL  LDA TKAP+WPVG DGNRPPAKIPVP+PPS S+KS E
Sbjct:   317 FSISIMKADHSILDRLDAPTKAPNWPVGTDGNRPPAKIPVPVPPSRSIKSME 368
GO:0004371 "glycerone kinase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006071 "glycerol metabolic process" evidence=IEA;ISS
GO:0009610 "response to symbiotic fungus" evidence=RCA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
TAIR|locus:2007680 AT1G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-652 dak "dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2385084 Dak "dihydroxyacetone kinase 2 homolog (yeast)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311026 Dak "dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RKQ4 DAK "Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DK4 DAK "Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN77 DAK "Dihydroxyacetone kinase 2 homolog (S. cerevisiae)" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0K5 DAK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|H0YCY6 DAK "FAD-AMP lyase (cyclizing)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_122000063
hypothetical protein (595 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_scaffold_44000008
glycerol kinase (EC-2.7.1.30) (519 aa)
•     • 0.697
fgenesh4_pg.C_scaffold_21030000001
Predicted protein (304 aa)
• •    •0.616
gw1.2233.1.1
Predicted protein (347 aa)
•     • 0.550
grail3.15892000101
Predicted protein (89 aa)
•     • 0.417

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
TIGR02361 574 TIGR02361, dak_ATP, dihydroxyacetone kinase, ATP-d 1e-130
pfam02733326 pfam02733, Dak1, Dak1 domain 1e-122
PRK14481331 PRK14481, PRK14481, dihydroxyacetone kinase subuni 5e-97
PRK14479 568 PRK14479, PRK14479, dihydroxyacetone kinase; Provi 1e-96
PTZ00375 584 PTZ00375, PTZ00375, dihydroxyacetone kinase-like p 5e-84
TIGR02363329 TIGR02363, dhaK1, dihydroxyacetone kinase, DhaK su 3e-79
COG2376323 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydra 1e-78
PRK11468356 PRK11468, PRK11468, dihydroxyacetone kinase subuni 8e-65
PRK14483329 PRK14483, PRK14483, DhaKLM operon coactivator DhaQ 7e-54
TIGR02362326 TIGR02362, dhaK1b, probable dihydroxyacetone kinas 2e-50
>gnl|CDD|233835 TIGR02361, dak_ATP, dihydroxyacetone kinase, ATP-dependent Back     alignment and domain information 
 Score =  382 bits (982), Expect = e-130
 Identities = 148/301 (49%), Positives = 195/301 (64%), Gaps = 9/301 (2%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTG-PMGCLLIVTNYTGDRLNFGLAAEQAKSEGYK 59
           MLTAA+ GDVFASP    ILA I AV G   G LLIV NYTGDRLNFGLAAE+AK+EGY 
Sbjct: 66  MLTAAVAGDVFASPSTKQILAAIRAVVGSEAGTLLIVKNYTGDRLNFGLAAEKAKAEGYN 125

Query: 60  VEIVIVGDDCALPPPRGI-AGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVG 118
           VE+VIVGDD ++   +G   GRRGLAGT+LV+KIAGAAAA GLSLA+VA  A+ A++ + 
Sbjct: 126 VEMVIVGDDVSVGRKKGGLVGRRGLAGTVLVHKIAGAAAARGLSLAEVAKVAQAAADNLV 185

Query: 119 TMGVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVADLQP-VDVVVSHVLKQILS 176
           T+G +L  C +PG+  ++  L   +MELG+GIH EPGA      P  D+VV  +LK++L 
Sbjct: 186 TIGASLDHCHVPGETEAEPELKEDEMELGMGIHNEPGAKRISPIPSSDLVVQLMLKKLLD 245

Query: 177 TET--NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMT 234
                +YV    G+ VVL++N LG    +EL I A + V  L L + +   R+Y+G+FMT
Sbjct: 246 ETDKRSYVKFNEGDEVVLLVNNLGGVSNLELGIIADEVVEQLALHYNIIPVRIYSGTFMT 305

Query: 235 SLDMAGFSISIMKADEV---ILKHLDATTKAPHWPVGVDGNRPPAKIPVPMPPSHSMKSD 291
           SL+  GFSI+++ A E    IL  LDA T+AP WPV    ++P  +    +  S     +
Sbjct: 306 SLNGPGFSITLLNATEAGKSILDLLDAPTEAPGWPVAAYSSKPWREKREVVSSSAPELIE 365

Query: 292 E 292
           E
Sbjct: 366 E 366

This family consists of examples of the form of dihydroxyacetone kinase (also called glycerone kinase) that uses ATP (2.7.1.29) as the phosphate donor, rather than a phosphoprotein as in E. coli. This form is composed of a single chain with separable domains homologous to the K and L subunits of the E. coli enzyme, and is found in yeasts and other eukaryotes and in some bacteria, including Citrobacter freundii. The member from tomato has been shown to phosphorylate dihydroxyacetone, 3,4-dihydroxy-2-butanone, and some other aldoses and ketoses (PMID:11985845). Length = 574
>gnl|CDD|202365 pfam02733, Dak1, Dak1 domain Back     alignment and domain information
>gnl|CDD|237724 PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>gnl|CDD|237723 PRK14479, PRK14479, dihydroxyacetone kinase; Provisional Back     alignment and domain information
>gnl|CDD|185583 PTZ00375, PTZ00375, dihydroxyacetone kinase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|233836 TIGR02363, dhaK1, dihydroxyacetone kinase, DhaK subunit Back     alignment and domain information
>gnl|CDD|225251 COG2376, DAK1, Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|183150 PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>gnl|CDD|172956 PRK14483, PRK14483, DhaKLM operon coactivator DhaQ; Provisional Back     alignment and domain information
>gnl|CDD|213706 TIGR02362, dhaK1b, probable dihydroxyacetone kinase DhaK1b subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 310
PRK14481331 dihydroxyacetone kinase subunit DhaK; Provisional 100.0
TIGR02363329 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two t 100.0
TIGR02362326 dhaK1b probable dihydroxyacetone kinase DhaK1b sub 100.0
PRK14483329 DhaKLM operon coactivator DhaQ; Provisional 100.0
PF02733325 Dak1: Dak1 domain; InterPro: IPR004006 Dihydroxyac 100.0
PRK11468356 dihydroxyacetone kinase subunit DhaK; Provisional 100.0
PRK14479 568 dihydroxyacetone kinase; Provisional 100.0
TIGR02361 574 dak_ATP dihydroxyacetone kinase, ATP-dependent. Th 100.0
PTZ00375 584 dihydroxyacetone kinase-like protein; Provisional 100.0
KOG2426 582 consensus Dihydroxyacetone kinase/glycerone kinase 100.0
COG2376323 DAK1 Dihydroxyacetone kinase [Carbohydrate transpo 100.0
TIGR03599530 YloV DAK2 domain fusion protein YloV. This model d 91.86
PRK11377 473 dihydroxyacetone kinase subunit M; Provisional 87.86
TIGR02364125 dha_pts dihydroxyacetone kinase, phosphotransfer s 86.05
PRK14484124 phosphotransferase mannnose-specific family compon 85.09
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.1e-107  Score=777.64  Aligned_cols=263  Identities=47%  Similarity=0.758  Sum_probs=257.8

Q ss_pred             CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (310)
Q Consensus         1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR   80 (310)
                      |||||||||||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||+++++.+++|
T Consensus        68 mLdaav~G~VFaSPs~~~Il~ai~av~~~~GvL~iv~NYtGD~lnF~lA~E~a~~eGi~v~~V~v~DDva~~~~~~~~~R  147 (331)
T PRK14481         68 MLDAAVCGAVFTSPTPDQILEAIKAVDTGAGVLLIVKNYSGDVMNFEMAAELAEMEGIEVASVVVDDDVAVEDSLYTQGR  147 (331)
T ss_pred             ccceeeeccccCCCCHHHHHHHHHhccCCCCEEEEeCCcHHHhccHHHHHHHHHhCCCCEEEEEeCCcccCCCCccCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999877778899


Q ss_pred             ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 021602           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD  159 (310)
Q Consensus        81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emEiGmGIHGEpG~~r~~  159 (310)
                      ||+||++||||||||||++|+||+||++++|++++|++||||+|++||+|| ++|+|+|++||||||||||||||++|.+
T Consensus       148 RGlAG~vlv~KiaGAaA~~G~sL~ev~~~a~~~~~~~~Tigval~~ct~Pg~~~~~f~l~~~emE~GmGIHGEpG~~r~~  227 (331)
T PRK14481        148 RGVAGTVFVHKIAGAAAEAGASLDEVKALAEKVNPNIRSMGVALSPCTVPAVGKPGFDLGDDEIEIGIGIHGEPGRRREK  227 (331)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhcceeeecccccccCCCCCCCCccCCCcEEeccccCCCCccccCC
Confidence            999999999999999999999999999999999999999999999999999 7899999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCCC
Q 021602          160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA  239 (310)
Q Consensus       160 ~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm~  239 (310)
                      +.|+++++++|+++|+++    +++++||+++|||||||+||.||||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus       228 ~~~a~~l~~~m~~~ll~~----~~~~~gd~v~lLvN~LG~ts~lEl~i~~~~v~~~L~~~-gi~i~r~~vG~~~TSldm~  302 (331)
T PRK14481        228 LKPADEIAEELLEKILED----LKLVAGDEVLVLVNGMGATPLMELYIVYNDVAELLEER-GVTVARSLVGNYMTSLDMA  302 (331)
T ss_pred             CCCHHHHHHHHHHHHHhh----cCCCCCCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEEeecccccCCCC
Confidence            999999999999999996    79999999999999999999999999999999999887 9999999999999999999


Q ss_pred             cceEEEecccHHHHHhhcCCCCCCCCCCC
Q 021602          240 GFSISIMKADEVILKHLDATTKAPHWPVG  268 (310)
Q Consensus       240 GfSiTLl~ldd~ll~lldaP~~ap~w~~~  268 (310)
                      ||||||+++||+|++|||+||++|+|+|.
T Consensus       303 G~SiTLl~ld~el~~~ldap~~~~~w~~~  331 (331)
T PRK14481        303 GFSITLLKLDDELLELLDAPVDTPALRWG  331 (331)
T ss_pred             ceEEEEeecCHHHHHHhCCCCcCCCCCCC
Confidence            99999999999999999999999999763

>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit Back     alignment and domain information
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit Back     alignment and domain information
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional Back     alignment and domain information
>PF02733 Dak1: Dak1 domain; InterPro: IPR004006 Dihydroxyacetone kinase (glycerone kinase) 2 Back     alignment and domain information
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional Back     alignment and domain information
>PRK14479 dihydroxyacetone kinase; Provisional Back     alignment and domain information
>TIGR02361 dak_ATP dihydroxyacetone kinase, ATP-dependent Back     alignment and domain information
>PTZ00375 dihydroxyacetone kinase-like protein; Provisional Back     alignment and domain information
>KOG2426 consensus Dihydroxyacetone kinase/glycerone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2376 DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03599 YloV DAK2 domain fusion protein YloV Back     alignment and domain information
>PRK11377 dihydroxyacetone kinase subunit M; Provisional Back     alignment and domain information
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit Back     alignment and domain information
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
1un9_A 552 Crystal Structure Of The Dihydroxyacetone Kinase Fr 3e-50
1un8_A 552 Crystal Structure Of The Dihydroxyacetone Kinase Of 4e-50
1oi2_A366 X-Ray Structure Of The Dihydroxyacetone Kinase From 2e-37
3pno_A357 Crystal Structure Of E.Coli Dha Kinase Dhak (H56n) 2e-37
1uoe_A366 Crystal Structure Of The Dihydroxyacetone Kinase Fr 2e-37
3pnk_A357 Crystal Structure Of E.Coli Dha Kinase Dhak Length 2e-37
3pnm_A357 Crystal Structure Of E.Coli Dha Kinase Dhak (H56a) 2e-37
3ct4_A332 Structure Of Dha-Kinase Subunit Dhak From L. Lactis 5e-36
2iu6_A336 Regulation Of The Dha Operon Of Lactococcus Lactis 3e-29
2iu4_A336 Dihydroxyacetone Kinase Operon Co-Activator Dha-Dha 4e-28
>pdb|1UN9|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase From C. Freundii In Complex With Amp-Pnp And Mg2+ Length = 552 Back     alignment and structure 
Iteration: 1

 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/279 (44%), Positives = 165/279 (59%), Gaps = 16/279 (5%)
Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           MLTAA+CGDVFASP VD++L  I AVTG  GCLLIV NYTGDRLNFGLAAE+A+  GY V
Sbjct: 73  MLTAAVCGDVFASPSVDAVLTAIQAVTGEAGCLLIVKNYTGDRLNFGLAAEKARRLGYNV 132
Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIXXXXXXXXXXXXXXXXXXKRASEMVGTM 120
           E++IVGDD +LP  +     RG+AGTILV+KI                  + A+    ++
Sbjct: 133 EMLIVGDDISLPDNK---HPRGIAGTILVHKIAGYFAERGYNLATVLREAQYAASNTFSL 189
Query: 121 GVALSVCTLPGQVTSD-RLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTET 179
           GVALS C LP +  +  R  PG  ELG+GIHGEPGA+V D Q    VV+ ++ ++L+   
Sbjct: 190 GVALSSCHLPQETDAAPRHHPGHAELGMGIHGEPGASVIDTQNSAQVVNLMVDKLLAA-- 247
Query: 180 NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239
             +P T   R+ +MIN LG   V E+ I   + + +  L H      +   S +T+LDM 
Sbjct: 248 --LPET--GRLAVMINNLGGVSVAEMAIIT-RELASSPL-HSRIDWLIGPASLVTALDMK 301
Query: 240 GFSISIMKADEVILKHLDATTKAPHWPVGVDGNRPPAKI 278
           GFS++ +  +E I K L    +  +WP  V    PP +I
Sbjct: 302 GFSLTAIVLEESIEKALLTEVETSNWPTPV----PPREI 336
>pdb|1UN8|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase Of C. Freundii (Native Form) Length = 552 Back     alignment and structure
>pdb|1OI2|A Chain A, X-Ray Structure Of The Dihydroxyacetone Kinase From Escherichia Coli Length = 366 Back     alignment and structure
>pdb|3PNO|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak (H56n) Length = 357 Back     alignment and structure
>pdb|1UOE|A Chain A, Crystal Structure Of The Dihydroxyacetone Kinase From E. Coli In Complex With Glyceraldehyde Length = 366 Back     alignment and structure
>pdb|3PNK|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak Length = 357 Back     alignment and structure
>pdb|3PNM|A Chain A, Crystal Structure Of E.Coli Dha Kinase Dhak (H56a) Length = 357 Back     alignment and structure
>pdb|3CT4|A Chain A, Structure Of Dha-Kinase Subunit Dhak From L. Lactis Length = 332 Back     alignment and structure
>pdb|2IU6|A Chain A, Regulation Of The Dha Operon Of Lactococcus Lactis Length = 336 Back     alignment and structure
>pdb|2IU4|A Chain A, Dihydroxyacetone Kinase Operon Co-Activator Dha-Dhaq Length = 336 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
3ct4_A332 PTS-dependent dihydroxyacetone kinase, dihydroxyac 1e-124
2iu4_A336 DHA-DHAQ, dihydroxyacetone kinase; transferase, CO 1e-122
1oi2_A366 Hypothetical protein YCGT; kinase, dihydroxyaceton 1e-120
1un8_A 552 Dihydroxyacetone kinase; transferase; HET: MYY; 2. 1e-118
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp} Length = 332 Back     alignment and structure
 Score =  358 bits (921), Expect = e-124
 Identities = 96/267 (35%), Positives = 146/267 (54%), Gaps = 7/267 (2%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           ML+AA+CG +F SP  D I   I +     G LLI+ NY GD +NF +A E A+ E  KV
Sbjct: 70  MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKV 129

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
           E +IV DD A+       GRRG+AGT+LV+KI GAAA    SL ++   A +  + + T+
Sbjct: 130 EQIIVDDDIAVENSLYTQGRRGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTI 189

Query: 121 GVALSVCTLPGQ-VTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILSTET 179
           G+ALS  T+P        L   ++E G+GIH EPG     ++    + + ++ ++     
Sbjct: 190 GLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREKMKTSYELATELVGKLKE--- 246

Query: 180 NYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA 239
                  G +  +++NG+GATP+ME  I        L  E  + +     G++MTS+DMA
Sbjct: 247 -EFKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLT-EENIEILFKKVGNYMTSIDMA 304

Query: 240 GFSISIMK-ADEVILKHLDATTKAPHW 265
           G S++++K  D+  LK+L+   K   W
Sbjct: 305 GLSLTMIKLEDDQWLKNLNEDVKTISW 331
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A Length = 336 Back     alignment and structure
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A Length = 366 Back     alignment and structure
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A* Length = 552 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
3ct4_A332 PTS-dependent dihydroxyacetone kinase, dihydroxyac 100.0
2iu4_A336 DHA-DHAQ, dihydroxyacetone kinase; transferase, CO 100.0
1oi2_A366 Hypothetical protein YCGT; kinase, dihydroxyaceton 100.0
1un8_A 552 Dihydroxyacetone kinase; transferase; HET: MYY; 2. 100.0
3nyi_A297 FAT acid-binding protein; stearic acid, DEGV famil 87.68
3fdj_A278 DEGV family protein; GUT microbiome, structural ge 87.18
3jr7_A298 Uncharacterized EGV family protein COG1307; struct 87.12
3pl5_A320 SMU_165, putative uncharacterized protein; fatty a 86.51
>3ct4_A PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DHAK; dihydroxyacetone kinase subunit, tranferase; 2.50A {Lactococcus lactis subsp} Back     alignment and structure
Probab=100.00  E-value=1.1e-108  Score=788.29  Aligned_cols=261  Identities=36%  Similarity=0.588  Sum_probs=248.0

Q ss_pred             CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (310)
Q Consensus         1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR   80 (310)
                      ||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++.+++||
T Consensus        70 MLdAAv~G~VFaSPs~~qi~~aikav~~g~GvL~ivkNYtGDvlNF~mAaE~a~~eGi~v~~VvV~DDvA~~~~~~~~gR  149 (332)
T 3ct4_A           70 MLSAAVCGAIFTSPTPDQIYEAIKSADEGAGVLLIIKNYLGDVMNFEMAREMAEMEEIKVEQIIVDDDIAVENSLYTQGR  149 (332)
T ss_dssp             SBSEEEEEEETCCCCHHHHHHHHHHHCCSSCEEEEEESCHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSSSSCTTCSSS
T ss_pred             ccceeeecccCCCCCHHHHHHHHHhhcCCCCEEEEeCCcHHHhhcHHHHHHHHHhcCCcEEEEEeCCcccCCCcCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999987778999


Q ss_pred             ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 021602           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD  159 (310)
Q Consensus        81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emEiGmGIHGEpG~~r~~  159 (310)
                      ||+|||||||||+|||||+|+||+||++++|++++|+|||||+|++||+|+ ++|+|+|++||||||||||||||++|.+
T Consensus       150 RGvAGtvlv~KIaGAaAe~G~~L~ev~~~a~~~~~~~~SiGval~~ctvP~~g~p~f~l~~~emE~G~GIHGEpG~~r~~  229 (332)
T 3ct4_A          150 RGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNIKTIGLALSAATVPEVGKPGFVLDDNEIEYGVGIHSEPGYRREK  229 (332)
T ss_dssp             CCCTTHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTEEEEEEESSCCCCC----------CCEEEETCCTTSCCCSEEEE
T ss_pred             CchhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhceEEEEECCCcCCCCCCCCCCccCCCceEeccccCCCCccccCC
Confidence            999999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhhcCCeEEEeeeeccccccCCC
Q 021602          160 LQPVDVVVSHVLKQILSTETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLEHGLAVERVYTGSFMTSLDMA  239 (310)
Q Consensus       160 ~~sa~elv~~ml~~ll~~~r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~~gi~v~r~~vG~~~TSldm~  239 (310)
                      ++|++|++++|+++|+++    +++++||+|+|||||||+||.+|||++++++.++|+++ ||+|+|+|+|+|||||||+
T Consensus       230 ~~~a~el~~~m~~~ll~~----~~~~~gd~v~vlVNgLG~t~~~El~i~~~~v~~~L~~~-gi~v~r~~vG~~~TSldM~  304 (332)
T 3ct4_A          230 MKTSYELATELVGKLKEE----FKFEAGQKYGILVNGMGATPLMEQFIFMNDVAKLLTEE-NIEILFKKVGNYMTSIDMA  304 (332)
T ss_dssp             CCCHHHHHHHHHHHHHHH----HTCCTTCEEEEEEEECBSSCHHHHHHHHHHHHHHHHTT-TCEEEEEEEECSSCCTTBC
T ss_pred             CCCHHHHHHHHHHHHHhh----cCcCCCCeEEEEEECCCCcCHHHHHHHHHHHHHHHHHC-CCeEEEEEeeccccccCCC
Confidence            999999999999999997    88999999999999999999999999999999999888 9999999999999999999


Q ss_pred             cceEEEecccH-HHHHhhcCCCCCCCCC
Q 021602          240 GFSISIMKADE-VILKHLDATTKAPHWP  266 (310)
Q Consensus       240 GfSiTLl~ldd-~ll~lldaP~~ap~w~  266 (310)
                      ||||||+|+|| |+++|||+||+||+|+
T Consensus       305 G~SiTll~ldd~el~~lldaP~~tp~w~  332 (332)
T 3ct4_A          305 GLSLTMIKLEDDQWLKNLNEDVKTISWG  332 (332)
T ss_dssp             EEEEEEEECCSHHHHHHHTSCCBCSCC-
T ss_pred             ccEEEEEECCHHHHHHHhCCCCCCCCCC
Confidence            99999999999 9999999999999995
>2iu4_A DHA-DHAQ, dihydroxyacetone kinase; transferase, CO-activa kinase; HET: HIQ; 1.96A {Lactococcus lactis} PDB: 2iu6_A Back     alignment and structure
>1oi2_A Hypothetical protein YCGT; kinase, dihydroxyacetone kinase; 1.75A {Escherichia coli} SCOP: c.119.1.2 PDB: 1oi3_A 1uod_A* 1uoe_A 3pnl_A* 3pnk_A* 3pno_A 3pnq_A 3pnm_A Back     alignment and structure
>1un8_A Dihydroxyacetone kinase; transferase; HET: MYY; 2.5A {Citrobacter freundii} SCOP: a.208.1.1 c.119.1.2 PDB: 1un9_A* Back     alignment and structure
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0 Back     alignment and structure
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0 Back     alignment and structure
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus} Back     alignment and structure
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 310
d1oi2a_347 c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, 1e-99
d1un8a4335 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citro 3e-90
>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK {Escherichia coli [TaxId: 562]} Length = 347 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DAK1/DegV-like
superfamily: DAK1/DegV-like
family: DAK1
domain: Dihydroxyacetone kinase subunit K, DhaK
species: Escherichia coli [TaxId: 562]

 Score =  294 bits (755), Expect = 1e-99
 Identities = 104/289 (35%), Positives = 143/289 (49%), Gaps = 22/289 (7%)

Query: 1   MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKV 60
           ML+ A  G++F SP  D I      V G  G LLI+ NYTGD LNF  A E     G KV
Sbjct: 59  MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKV 118

Query: 61  EIVIVGDDCALPPPRGIAGRRGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTM 120
             V++ DD A+      AGRRG+A T+L+ K+ GAAA  G SL   A   ++ +    ++
Sbjct: 119 TTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSI 178

Query: 121 GVALSVCTLPGQ-VTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILS--- 176
           G+AL  CT+P     S  L   +ME G+GIHGEPG        +D  V  +   +L    
Sbjct: 179 GIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGS 238

Query: 177 -----------------TETNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE 219
                             +    P+  G+RV+ ++N LGATP+ EL     +     Q +
Sbjct: 239 YHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQ-Q 297

Query: 220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG 268
            GL +ER   G++ TSLDM GFSI+++K D+  L   DA    P    G
Sbjct: 298 AGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG 346
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]} Length = 335 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
d1oi2a_347 Dihydroxyacetone kinase subunit K, DhaK {Escherich 100.0
d1un8a4335 Dihydroxyacetone kinase {Citrobacter freundii [Tax 100.0
d3ct6a1123 PTS-dependent dihydroxyacetone kinase, phosphotran 88.43
>d1oi2a_ c.119.1.2 (A:) Dihydroxyacetone kinase subunit K, DhaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DAK1/DegV-like
superfamily: DAK1/DegV-like
family: DAK1
domain: Dihydroxyacetone kinase subunit K, DhaK
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-107  Score=780.27  Aligned_cols=267  Identities=39%  Similarity=0.621  Sum_probs=251.0

Q ss_pred             CcceeecCCccCCCCHHHHHHHHHhccCCCceEEEeeccccccccHHHHHHHHHhcCCcEEEEEecccccCCCCCCCCCc
Q 021602            1 MLTAAICGDVFASPPVDSILAGIHAVTGPMGCLLIVTNYTGDRLNFGLAAEQAKSEGYKVEIVIVGDDCALPPPRGIAGR   80 (310)
Q Consensus         1 MLdAav~G~VFaSPs~~qIl~ai~~v~~~~GvL~iv~NYtGD~LNFgmA~E~A~~~Gi~v~~ViV~DDvA~~~~~~~~gR   80 (310)
                      ||||||||+||||||++||++|||++++++|||+||||||||+||||||+|+|+++||+|++|+|+||||++++..++||
T Consensus        59 mLdAav~G~vFaSPs~~qI~~aik~v~~~~GvLliv~NYtGDvlNF~mA~E~a~~egi~v~~vvv~DDva~~~~~~~~gR  138 (347)
T d1oi2a_          59 MLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGR  138 (347)
T ss_dssp             SBSEEEEEEETSCCCHHHHHHHHHHHCCSSCEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEEECCBCSCBSCTTCSSB
T ss_pred             cccceeccccccCCChHHHHHHHHhhcCCCCEEEEeccchhhhccHHHHHHHHHhcCCceEEEEeCCccccCCccccccC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999887778999


Q ss_pred             ccccchhhHHHHHhHHHHcCCCHHHHHHHHHHHHhhhccceeeccccccCC-CCCCCCCCCCeeEEeccccCCCCccccc
Q 021602           81 RGLAGTILVNKIAGAAAAAGLSLADVAAEAKRASEMVGTMGVALSVCTLPG-QVTSDRLGPGKMELGLGIHGEPGAAVAD  159 (310)
Q Consensus        81 RGlAGtvlv~KIaGAaAe~G~sL~ev~~~a~~~~~~~~Tigvals~c~~Pg-~~~~f~L~~~emEiGmGIHGEpG~~r~~  159 (310)
                      ||+|||||||||||||||+|+||+||+++++++++|++||||+|+||++|+ ++|+|+|++||||||||||||||++|.+
T Consensus       139 RG~AGtvlv~KiaGAaAe~G~~Ldev~~~a~~~~~~~~Tigvals~c~vP~~g~~~f~L~~~emE~GmGIHGEpG~~r~~  218 (347)
T d1oi2a_         139 RGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRP  218 (347)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTEEEEEEEEECC-----------CCTTEEEETCCTTSCCCSEEEE
T ss_pred             CccchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcceeeEEecCCCCCCCCCCCcccCCCceeccccccCCCCccccC
Confidence            999999999999999999999999999999999999999999999999999 8999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHccc--------------------CCCCCCCCCCeEEEEEcCCCCChHHHHHHHHHHHHHhhhhh
Q 021602          160 LQPVDVVVSHVLKQILSTE--------------------TNYVPITRGNRVVLMINGLGATPVMELMIAAGKAVPNLQLE  219 (310)
Q Consensus       160 ~~sa~elv~~ml~~ll~~~--------------------r~~l~~~~gd~v~vlVNnLG~ts~lEl~i~~~~v~~~L~~~  219 (310)
                      ++|+++++++|+++|+++.                    +.++++++||+|+|||||||+||.||||++++++.++|+++
T Consensus       219 ~~~a~~lv~~m~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~vlVN~LG~ts~lEl~i~~~~v~~~L~~~  298 (347)
T d1oi2a_         219 FSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQA  298 (347)
T ss_dssp             CCCHHHHHHHHHHHHHHSCCEEEEEEEEETTTTEEEEEEEEECCCCTTCEEEEEEEECBSCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhccccccccccccccccccccccccccCCCCCCeEEEEEcCCCCCcHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999752                    35689999999999999999999999999999999999998


Q ss_pred             cCCeEEEeeeeccccccCCCcceEEEecccHHHHHhhcCCCCCCCCCCC
Q 021602          220 HGLAVERVYTGSFMTSLDMAGFSISIMKADEVILKHLDATTKAPHWPVG  268 (310)
Q Consensus       220 ~gi~v~r~~vG~~~TSldm~GfSiTLl~ldd~ll~lldaP~~ap~w~~~  268 (310)
                       ||+|+|+|+|+|||||||+|||||||++||++++|||+||+||+|+|.
T Consensus       299 -gi~v~r~~vG~f~TSldm~G~SiTll~ldd~l~~~ldap~~tpa~~w~  346 (347)
T d1oi2a_         299 -GLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWG  346 (347)
T ss_dssp             -TCEEEEEEEECSSCCTTBEEEEEEEEEECHHHHHHHHSCEESSSCEEC
T ss_pred             -CCeEEEEEeeccccccCCCccEEEEEeCCHHHHHHhCCCcCCcccCCC
Confidence             999999999999999999999999999999999999999999999875
>d1un8a4 c.119.1.2 (A:1-335) Dihydroxyacetone kinase {Citrobacter freundii [TaxId: 546]} Back     information, alignment and structure
>d3ct6a1 c.54.1.2 (A:1-123) PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure