Citrus Sinensis ID: 021612

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
MILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
ccHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccEEEEccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccEEccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccc
cccHHHHHHHHHHHHHccccccEEEEEcHcccccEEEEccccccccHHHHHHHHHHcccEEEEEEcccccccccccEHHHHHcccEEEEcccccccEEEcccccccccccccHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEcccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHcccHHHHccccccccccccccccHHHHHHHHHHHHHHEEEEcc
MILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLtrhrfpdpkslaaDLHLNGFKAiwmldpgikhedgyfvydsgskiDVWIqkadgtpfigevwpgpcvfpdytqskvRSWWGSLVKDFIYNgvdgiwndmnepavfksvtktmpesnihrgddeiggcqnhsyyHNVYGMLMARSTYegmkladkdkrpfvltragfigsqryaatwtgdnvsnwEHLHMSISMVLQLglsgqpfsgpdiggfdgnatprlfgrwmgigamfpfcrghtesdaidhepwsfgeevLFCSSIVIIAFFWFKLE
milirefvrfaghfvrkvYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
MILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
*ILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK******IHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFK**
*ILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKL*
MILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
****REFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiii
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MILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFFWFKLE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query310 2.2.26 [Sep-21-2011]
Q9F234 787 Alpha-glucosidase 2 OS=Ba N/A no 0.916 0.360 0.451 4e-67
Q8TET4 914 Neutral alpha-glucosidase yes no 0.793 0.269 0.417 6e-50
Q9BE70 769 Neutral alpha-glucosidase N/A no 0.793 0.319 0.410 8e-49
Q8BVW0 898 Neutral alpha-glucosidase yes no 0.793 0.273 0.417 1e-48
P79403 944 Neutral alpha-glucosidase no no 0.770 0.253 0.397 5e-47
Q14697 944 Neutral alpha-glucosidase no no 0.761 0.25 0.392 2e-46
Q4R4N7 944 Neutral alpha-glucosidase N/A no 0.761 0.25 0.392 5e-46
Q94502 943 Neutral alpha-glucosidase yes no 0.777 0.255 0.379 2e-45
Q8BHN3 944 Neutral alpha-glucosidase no no 0.777 0.255 0.377 3e-45
P38138 954 Glucosidase 2 subunit alp yes no 0.832 0.270 0.382 4e-43
>sp|Q9F234|AGL2_BACTQ Alpha-glucosidase 2 OS=Bacillus thermoamyloliquefaciens PE=3 SV=1 Back     alignment and function desciption
 Score =  254 bits (650), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 168/288 (58%), Gaps = 4/288 (1%)

Query: 5   REFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWM 64
           +E    A  F+ K  P+ +    +     + V    R+RFP+ K L ADL   G + + +
Sbjct: 275 QEVREIAQTFIEKDIPLDVIYLDIHYMNGYRVFTFDRNRFPNLKQLIADLKQKGIRVVPI 334

Query: 65  LDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVK 124
           +DPG+K +  Y +Y  G + D + +  +G  + GEVWPG   FPD+T  KVR WWG   +
Sbjct: 335 VDPGVKEDPEYVIYQEGIRHDYFCKYIEGNVYFGEVWPGKSAFPDFTNKKVRKWWGEKHQ 394

Query: 125 DFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARST 184
            +   G++GIWNDMNEP+VF   TKTM    IH  D   G  + H   HNVYG +M  +T
Sbjct: 395 FYTDLGIEGIWNDMNEPSVFNE-TKTMDVKVIHDND---GDPKTHRELHNVYGFMMGEAT 450

Query: 185 YEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFS 244
           Y+GMK     KRPF+LTRAGF G QRYAA WTGDN S WEHL MS+ M + LGLSG  F 
Sbjct: 451 YKGMKKLLNGKRPFLLTRAGFSGIQRYAAVWTGDNRSFWEHLQMSLPMCMNLGLSGVAFC 510

Query: 245 GPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEE 292
           GPD+GGF  N    L  RWM +GA  P+ R H        EPW+FGE+
Sbjct: 511 GPDVGGFAHNTNGELLTRWMQVGAFTPYFRNHCAIGFRRQEPWAFGEK 558

Bacillus thermoamyloliquefaciens (taxid: 1425)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 0
>sp|Q8TET4|GANC_HUMAN Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=3 Back     alignment and function description
>sp|Q9BE70|GANC_MACFA Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2 Back     alignment and function description
>sp|Q8BVW0|GANC_MOUSE Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2 Back     alignment and function description
>sp|P79403|GANAB_PIG Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1 Back     alignment and function description
>sp|Q14697|GANAB_HUMAN Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3 Back     alignment and function description
>sp|Q4R4N7|GANAB_MACFA Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1 Back     alignment and function description
>sp|Q94502|GANAB_DICDI Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1 Back     alignment and function description
>sp|Q8BHN3|GANAB_MOUSE Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1 Back     alignment and function description
>sp|P38138|GLU2A_YEAST Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ROT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
296088485 1057 unnamed protein product [Vitis vinifera] 0.890 0.261 0.792 1e-133
359474648 991 PREDICTED: alpha-glucosidase 2-like [Vit 0.890 0.278 0.792 1e-133
297831124 988 hypothetical protein ARALYDRAFT_898886 [ 0.890 0.279 0.785 1e-131
18403833 991 heteroglycan glucosidase 1 [Arabidopsis 0.890 0.278 0.785 1e-130
9294522 959 alpha glucosidase-like protein [Arabidop 0.890 0.287 0.785 1e-130
356508232 988 PREDICTED: alpha-glucosidase 2-like [Gly 0.954 0.299 0.727 1e-129
357484583 1058 Alpha glucosidase-like protein [Medicago 0.954 0.279 0.720 1e-129
255557713 991 neutral alpha-glucosidase ab precursor, 0.890 0.278 0.778 1e-128
449456921 1058 PREDICTED: alpha-glucosidase 2-like [Cuc 0.890 0.260 0.764 1e-127
296085512373 unnamed protein product [Vitis vinifera] 0.835 0.694 0.810 1e-126
>gi|296088485|emb|CBI37476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  479 bits (1233), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/280 (79%), Positives = 244/280 (87%), Gaps = 4/280 (1%)

Query: 26  WILTTWMD-FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI 84
           W+   +MD F      + RF DPKSL  DLHLNGFKAIWMLDPGIK EDGYFVYDSGS  
Sbjct: 299 WMDIDYMDGFRCFTFDQERFSDPKSLGKDLHLNGFKAIWMLDPGIKQEDGYFVYDSGSAN 358

Query: 85  DVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF 144
           DVWI KADGTPF+G+VWPGPCVFPD+TQSK RSWW  LVKDFI NGVDGIWNDMNEPAVF
Sbjct: 359 DVWIHKADGTPFVGKVWPGPCVFPDFTQSKARSWWACLVKDFISNGVDGIWNDMNEPAVF 418

Query: 145 KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAG 204
           K+VTKTMPE N+HRGD E+GGCQNHS+YHNVYGMLMARSTYEGMKLA+++KRPFVLTRAG
Sbjct: 419 KTVTKTMPEDNVHRGDAELGGCQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAG 478

Query: 205 FIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWM 264
           +IGSQRYAATWTGDN+SNW+HLHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWM
Sbjct: 479 YIGSQRYAATWTGDNLSNWDHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWM 538

Query: 265 GIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF 304
           G+GAMFPFCRGH+E+  +DHEPWSFGEE   C  +  +A 
Sbjct: 539 GVGAMFPFCRGHSETGTVDHEPWSFGEE---CEEVCRLAL 575

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359474648|ref|XP_002263148.2| PREDICTED: alpha-glucosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297831124|ref|XP_002883444.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] gi|297329284|gb|EFH59703.1| hypothetical protein ARALYDRAFT_898886 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18403833|ref|NP_566736.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|186510357|ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|16648903|gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gi|27311799|gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gi|31711788|gb|AAP68250.1| At3g23640 [Arabidopsis thaliana] gi|332643272|gb|AEE76793.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gi|332643273|gb|AEE76794.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9294522|dbj|BAB02784.1| alpha glucosidase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356508232|ref|XP_003522863.1| PREDICTED: alpha-glucosidase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|357484583|ref|XP_003612579.1| Alpha glucosidase-like protein [Medicago truncatula] gi|355513914|gb|AES95537.1| Alpha glucosidase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255557713|ref|XP_002519886.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] gi|223540932|gb|EEF42490.1| neutral alpha-glucosidase ab precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449456921|ref|XP_004146197.1| PREDICTED: alpha-glucosidase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296085512|emb|CBI29244.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
TAIR|locus:2088035 991 HGL1 "heteroglycan glucosidase 0.861 0.269 0.813 9.9e-126
TAIR|locus:2163976 921 RSW3 "RADIAL SWELLING 3" [Arab 0.780 0.262 0.424 4.3e-52
WB|WBGene00009583 924 aagr-3 [Caenorhabditis elegans 0.793 0.266 0.402 8.5e-50
UNIPROTKB|Q8TET4 914 GANC "Neutral alpha-glucosidas 0.793 0.269 0.421 5.7e-48
UNIPROTKB|J9NYZ4 738 GANC "Uncharacterized protein" 0.793 0.333 0.402 4e-47
UNIPROTKB|E1BKJ4 916 GANC "Uncharacterized protein" 0.793 0.268 0.417 4.2e-47
MGI|MGI:1923301 898 Ganc "glucosidase, alpha; neut 0.793 0.273 0.417 5.1e-47
UNIPROTKB|E2RAA1 914 GANC "Uncharacterized protein" 0.793 0.269 0.402 1.5e-46
UNIPROTKB|I3LNH3 944 GANAB "Neutral alpha-glucosida 0.770 0.253 0.393 2.1e-46
UNIPROTKB|P79403 944 GANAB "Neutral alpha-glucosida 0.770 0.253 0.393 2.1e-46
TAIR|locus:2088035 HGL1 "heteroglycan glucosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
 Identities = 218/268 (81%), Positives = 237/268 (88%)

Query:    26 WILTTWMD-FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI 84
             W+   +MD F      + RFPDP +LA DLH NGFKAIWMLDPGIK E+GY+VYDSGSK 
Sbjct:   233 WMDIDYMDGFRCFTFDKERFPDPSALAKDLHSNGFKAIWMLDPGIKQEEGYYVYDSGSKN 292

Query:    85 DVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF 144
             DVWI +ADG PF GEVWPGPCVFPDYT SK RSWW +LVK+F+ NGVDGIWNDMNEPAVF
Sbjct:   293 DVWISRADGKPFTGEVWPGPCVFPDYTNSKARSWWANLVKEFVSNGVDGIWNDMNEPAVF 352

Query:   145 KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAG 204
             K VTKTMPE+NIH GDDE+GG QNHS+YHNVYGMLMARSTYEGM+LADK+KRPFVLTRAG
Sbjct:   353 KVVTKTMPENNIHHGDDELGGVQNHSHYHNVYGMLMARSTYEGMELADKNKRPFVLTRAG 412

Query:   205 FIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWM 264
             FIGSQRYAATWTGDN+SNWEHLHMSISMVLQLGLSGQP SGPDIGGF GNATPRLFGRWM
Sbjct:   413 FIGSQRYAATWTGDNLSNWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWM 472

Query:   265 GIGAMFPFCRGHTESDAIDHEPWSFGEE 292
             G+GAMFPFCRGH+E+   DHEPWSFGEE
Sbjct:   473 GVGAMFPFCRGHSEAGTDDHEPWSFGEE 500
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2163976 RSW3 "RADIAL SWELLING 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00009583 aagr-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TET4 GANC "Neutral alpha-glucosidase C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9NYZ4 GANC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BKJ4 GANC "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1923301 Ganc "glucosidase, alpha; neutral C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RAA1 GANC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LNH3 GANAB "Neutral alpha-glucosidase AB" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P79403 GANAB "Neutral alpha-glucosidase AB" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_302856.1
annotation not avaliable (988 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
PLN02763 978 PLN02763, PLN02763, hydrolase, hydrolyzing O-glyco 1e-170
cd06604339 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosida 1e-147
pfam01055 436 pfam01055, Glyco_hydro_31, Glycosyl hydrolases fam 1e-100
cd06603339 cd06603, GH31_GANC_GANAB_alpha, This family includ 5e-93
cd06602339 cd06602, GH31_MGAM_SI_GAA, This family includes th 1e-76
COG1501 772 COG1501, COG1501, Alpha-glucosidases, family 31 of 1e-74
cd06600317 cd06600, GH31_MGAM-like, This family includes the 2e-73
cd06589265 cd06589, GH31, The enzymes of glycosyl hydrolase f 5e-48
cd06598317 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetra 2e-43
cd06599317 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolas 5e-42
cd06593308 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosida 8e-37
cd06591319 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl 1e-36
cd06601332 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-gluca 4e-36
cd06597340 cd06597, GH31_transferase_CtsY, CtsY (cyclic tetra 3e-19
cd06594317 cd06594, GH31_glucosidase_YihQ, YihQ is a bacteria 2e-15
PRK10426 635 PRK10426, PRK10426, alpha-glucosidase; Provisional 1e-14
cd06596261 cd06596, GH31_CPE1046, CPE1046 is an uncharacteriz 4e-14
PRK10658665 PRK10658, PRK10658, putative alpha-glucosidase; Pr 1e-13
cd06595292 cd06595, GH31_xylosidase_XylS-like, This family re 8e-12
cd06592303 cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an 1e-08
>gnl|CDD|215408 PLN02763, PLN02763, hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information 
 Score =  497 bits (1280), Expect = e-170
 Identities = 213/269 (79%), Positives = 232/269 (86%), Gaps = 6/269 (2%)

Query: 31  WMD------FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKI 84
           WMD      F      + RFPDPK LA DLH  GFKAIWMLDPGIK E+GYFVYDSG + 
Sbjct: 221 WMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCEN 280

Query: 85  DVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF 144
           DVWIQ ADG PF+GEVWPGPCVFPD+T  K RSWW +LVKDF+ NGVDGIWNDMNEPAVF
Sbjct: 281 DVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNEPAVF 340

Query: 145 KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAG 204
           K+VTKTMPE+NIHRGD+E+GG QNHS+YHNVYGMLMARSTYEGM LA+K+KRPFVLTRAG
Sbjct: 341 KTVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAG 400

Query: 205 FIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWM 264
           FIGSQRYAATWTGDN+SNWEHLHMSI MVLQLGLSGQP SGPDIGGF G+ATP+LFGRWM
Sbjct: 401 FIGSQRYAATWTGDNLSNWEHLHMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWM 460

Query: 265 GIGAMFPFCRGHTESDAIDHEPWSFGEEV 293
           G+GAMFPF RGH+E   IDHEPWSFGEE 
Sbjct: 461 GVGAMFPFARGHSEQGTIDHEPWSFGEEC 489

Length = 978
>gnl|CDD|133135 cd06604, GH31_glucosidase_II_MalA, Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information
>gnl|CDD|216268 pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31 Back     alignment and domain information
>gnl|CDD|133134 cd06603, GH31_GANC_GANAB_alpha, This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>gnl|CDD|133133 cd06602, GH31_MGAM_SI_GAA, This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>gnl|CDD|224418 COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133131 cd06600, GH31_MGAM-like, This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>gnl|CDD|133121 cd06589, GH31, The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>gnl|CDD|133129 cd06598, GH31_transferase_CtsZ, CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>gnl|CDD|133130 cd06599, GH31_glycosidase_Aec37, Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>gnl|CDD|133124 cd06593, GH31_xylosidase_YicI, YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>gnl|CDD|133122 cd06591, GH31_xylosidase_XylS, XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>gnl|CDD|133132 cd06601, GH31_lyase_GLase, GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>gnl|CDD|133128 cd06597, GH31_transferase_CtsY, CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>gnl|CDD|133125 cd06594, GH31_glucosidase_YihQ, YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>gnl|CDD|236691 PRK10426, PRK10426, alpha-glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|133127 cd06596, GH31_CPE1046, CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>gnl|CDD|236731 PRK10658, PRK10658, putative alpha-glucosidase; Provisional Back     alignment and domain information
>gnl|CDD|133126 cd06595, GH31_xylosidase_XylS-like, This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>gnl|CDD|133123 cd06592, GH31_glucosidase_KIAA1161, KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 310
cd06604339 GH31_glucosidase_II_MalA Alpha-glucosidase II (alp 100.0
PLN02763 978 hydrolase, hydrolyzing O-glycosyl compounds 100.0
cd06603339 GH31_GANC_GANAB_alpha This family includes the clo 100.0
cd06600317 GH31_MGAM-like This family includes the following 100.0
cd06598317 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide 100.0
cd06602339 GH31_MGAM_SI_GAA This family includes the followin 100.0
cd06593308 GH31_xylosidase_YicI YicI alpha-xylosidase is a gl 100.0
cd06601332 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) 100.0
cd06591319 GH31_xylosidase_XylS XylS is a glycosyl hydrolase 100.0
KOG1066 915 consensus Glucosidase II catalytic (alpha) subunit 100.0
cd06599317 GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 100.0
cd06594317 GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl 100.0
PRK10658665 putative alpha-glucosidase; Provisional 100.0
COG1501 772 Alpha-glucosidases, family 31 of glycosyl hydrolas 100.0
cd06597340 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide 100.0
PF01055441 Glyco_hydro_31: Glycosyl hydrolases family 31 ; In 100.0
PRK10426 635 alpha-glucosidase; Provisional 100.0
cd06592303 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact 100.0
cd06595292 GH31_xylosidase_XylS-like This family represents a 100.0
cd06589265 GH31 The enzymes of glycosyl hydrolase family 31 ( 100.0
KOG1065 805 consensus Maltase glucoamylase and related hydrola 100.0
cd06596261 GH31_CPE1046 CPE1046 is an uncharacterized Clostri 100.0
PF02065394 Melibiase: Melibiase; InterPro: IPR000111 O-Glycos 99.5
PLN03231357 putative alpha-galactosidase; Provisional 98.92
PLN02808386 alpha-galactosidase 98.72
PLN02692412 alpha-galactosidase 98.7
PLN02229427 alpha-galactosidase 98.69
PLN02899 633 alpha-galactosidase 98.66
COG3345687 GalA Alpha-galactosidase [Carbohydrate transport a 98.07
COG1649418 Uncharacterized protein conserved in bacteria [Fun 97.1
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 97.04
KOG2366414 consensus Alpha-D-galactosidase (melibiase) [Carbo 97.01
PLN02355 758 probable galactinol--sucrose galactosyltransferase 96.76
TIGR02456 539 treS_nterm trehalose synthase. Trehalose synthase 96.76
PRK10785598 maltodextrin glucosidase; Provisional 96.69
PLN02219 775 probable galactinol--sucrose galactosyltransferase 96.66
TIGR01515 613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 96.54
PRK10933 551 trehalose-6-phosphate hydrolase; Provisional 96.5
PLN02684 750 Probable galactinol--sucrose galactosyltransferase 96.46
PRK03705 658 glycogen debranching enzyme; Provisional 96.46
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 96.17
TIGR02104 605 pulA_typeI pullulanase, type I. Pullulan is an unu 96.14
PLN00196428 alpha-amylase; Provisional 96.14
PLN02711 777 Probable galactinol--sucrose galactosyltransferase 96.14
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 96.13
PF13200316 DUF4015: Putative glycosyl hydrolase domain 96.06
PF05691 747 Raffinose_syn: Raffinose synthase or seed imbibiti 95.91
TIGR02100 688 glgX_debranch glycogen debranching enzyme GlgX. Th 95.84
TIGR02403 543 trehalose_treC alpha,alpha-phosphotrehalase. Treha 95.84
PRK14510 1221 putative bifunctional 4-alpha-glucanotransferase/g 95.76
COG1523 697 PulA Type II secretory pathway, pullulanase PulA a 95.44
PLN02960 897 alpha-amylase 94.93
PRK05402 726 glycogen branching enzyme; Provisional 94.9
PLN03244 872 alpha-amylase; Provisional 94.88
PRK12313 633 glycogen branching enzyme; Provisional 94.81
PLN02447 758 1,4-alpha-glucan-branching enzyme 94.76
TIGR02402 542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 94.73
TIGR02102 1111 pullulan_Gpos pullulanase, extracellular, Gram-pos 94.72
PLN02784894 alpha-amylase 94.66
PLN02361401 alpha-amylase 94.62
PRK14706 639 glycogen branching enzyme; Provisional 94.38
TIGR02103 898 pullul_strch alpha-1,6-glucosidases, pullulanase-t 93.83
PRK12568 730 glycogen branching enzyme; Provisional 93.64
TIGR01370315 cysRS possible cysteinyl-tRNA synthetase, Methanoc 93.18
PRK09441479 cytoplasmic alpha-amylase; Reviewed 92.79
PRK14705 1224 glycogen branching enzyme; Provisional 92.7
PLN02877 970 alpha-amylase/limit dextrinase 92.54
KOG0470 757 consensus 1,4-alpha-glucan branching enzyme/starch 92.54
COG0366 505 AmyA Glycosidases [Carbohydrate transport and meta 92.29
PRK09505683 malS alpha-amylase; Reviewed 89.99
KOG0471 545 consensus Alpha-amylase [Carbohydrate transport an 89.9
PF13199 559 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 89.81
PF01120346 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 85.78
COG0296 628 GlgB 1,4-alpha-glucan branching enzyme [Carbohydra 85.23
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 85.07
PF1488579 GHL15: Hypothetical glycosyl hydrolase family 15 84.59
COG2342300 Predicted extracellular endo alpha-1,4 polygalacto 83.99
COG4868 493 Uncharacterized protein conserved in bacteria [Fun 80.32
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities Back     alignment and domain information 
Probab=100.00  E-value=5.6e-81  Score=585.75  Aligned_cols=299  Identities=52%  Similarity=0.953  Sum_probs=279.2

Q ss_pred             HHHHHHHHHHHhHHhCCcceEEEeeecccCC-CcceeeCCCCCCChHHHHHHHHhCCCeEEEEeCCccccCCCccccccc
Q 021612            3 LIREFVRFAGHFVRKVYPVMLYGWILTTWMD-FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSG   81 (310)
Q Consensus         3 ~~~~v~~~~~~~~~~~iP~d~~~~~d~~w~~-~~~ft~d~~~Fpdp~~mi~~L~~~G~k~~~~v~P~i~~~~~~~~y~~~   81 (310)
                      .+++|+++++++|+++||||+|+ +|.+|++ +++|+||+++||||++|+++||++|+|+++|++|+|..+++|.+|+++
T Consensus        22 ~~~~v~~~~~~~~~~~iP~d~i~-lD~~~~~~~~~f~~d~~~fPdp~~m~~~l~~~g~~~~~~~~P~v~~~~~~~~~~e~  100 (339)
T cd06604          22 PEEEVREIADEFRERDIPCDAIY-LDIDYMDGYRVFTWDKERFPDPKELIKELHEQGFKVVTIIDPGVKVDPGYDVYEEG  100 (339)
T ss_pred             CHHHHHHHHHHHHHhCCCcceEE-ECchhhCCCCceeeccccCCCHHHHHHHHHHCCCEEEEEEeCceeCCCCChHHHHH
Confidence            57899999999999999999975 6999998 899999999999999999999999999999999999988778899999


Q ss_pred             cccceeEecCCCCceeEeecCCCccCCCCCCHHHHHHHHHHHHhHHhCCccEEEecCCCCcccCCCCC-CCCCCCcCCCC
Q 021612           82 SKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK-TMPESNIHRGD  160 (310)
Q Consensus        82 ~~~~~~v~~~~g~~~~~~~w~G~~~~~Dft~p~a~~ww~~~~~~~~~~Gvdg~w~D~~e~~~~~~~~~-~lp~~~~~~g~  160 (310)
                      +++|+||++++|+++++.+|+|.+++||||||+|++||.++++++++.||||||+|+|||+.++.... ++|.+..|.+.
T Consensus       101 ~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~p~~~~~~~~  180 (339)
T cd06604         101 LENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFNTPGKTTMPRDAVHRLD  180 (339)
T ss_pred             HHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHhhCCCceEeecCCCccccCCcccccCCccceeeCC
Confidence            99999999999999999999999999999999999999999999999999999999999998876543 47887777643


Q ss_pred             CCCCCccccchhhhhhHHHHHHHHHHHhhhhcCCCCcEEEEcccCCCCCCcceeeCCCCCCCchHHHHHHHHHHHhhhcC
Q 021612          161 DEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSG  240 (310)
Q Consensus       161 ~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~~r~~~~w~GD~~ssW~~L~~~i~~~l~~~l~G  240 (310)
                      .   +...+.++||+|++++++|+++++++..+++|||+++||+++|+|||+++|+||+.++|++|+.+|+++|++|++|
T Consensus       181 ~---~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~ssW~~L~~~i~~~l~~~l~G  257 (339)
T cd06604         181 G---GGGTHEEVHNVYGLLMARATYEGLKKARPNERPFILTRAGYAGIQRYAAVWTGDNRSSWEHLRLSIPMLLNLGLSG  257 (339)
T ss_pred             C---CCCcHhHhcchhhHHHHHHHHHHHHHhCCCCCcEEEEecccccccccccccCCcccCCHHHHHHHHHHHHHHHhcC
Confidence            2   1236889999999999999999999988899999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCCCCChhHHHHHHHhhhhccccccCCCCCCCCCCCcccChhhHHHHHHHHHHHh
Q 021612          241 QPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAFF  305 (310)
Q Consensus       241 ~p~~g~DIgGf~g~~~~EL~~RW~Q~g~f~P~~r~h~~~~~~~~ePw~~~~~~~~~~r~~i~~~~  305 (310)
                      +|++|+|||||.+++++|||+||+|+|||+|+||+|+..+..++|||.|++++.+++|++++-+.
T Consensus       258 ~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy  322 (339)
T cd06604         258 VPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLRY  322 (339)
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998777899999999999999999998653

Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds Back     alignment and domain information
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB) Back     alignment and domain information
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II Back     alignment and domain information
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY Back     alignment and domain information
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase Back     alignment and domain information
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose Back     alignment and domain information
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end Back     alignment and domain information
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate Back     alignment and domain information
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 Back     alignment and domain information
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride Back     alignment and domain information
>PRK10658 putative alpha-glucosidase; Provisional Back     alignment and domain information
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ Back     alignment and domain information
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10426 alpha-glucosidase; Provisional Back     alignment and domain information
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase Back     alignment and domain information
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus Back     alignment and domain information
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase Back     alignment and domain information
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain Back     alignment and domain information
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN03231 putative alpha-galactosidase; Provisional Back     alignment and domain information
>PLN02808 alpha-galactosidase Back     alignment and domain information
>PLN02692 alpha-galactosidase Back     alignment and domain information
>PLN02229 alpha-galactosidase Back     alignment and domain information
>PLN02899 alpha-galactosidase Back     alignment and domain information
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02355 probable galactinol--sucrose galactosyltransferase 1 Back     alignment and domain information
>TIGR02456 treS_nterm trehalose synthase Back     alignment and domain information
>PRK10785 maltodextrin glucosidase; Provisional Back     alignment and domain information
>PLN02219 probable galactinol--sucrose galactosyltransferase 2 Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PRK10933 trehalose-6-phosphate hydrolase; Provisional Back     alignment and domain information
>PLN02684 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PRK03705 glycogen debranching enzyme; Provisional Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR02104 pulA_typeI pullulanase, type I Back     alignment and domain information
>PLN00196 alpha-amylase; Provisional Back     alignment and domain information
>PLN02711 Probable galactinol--sucrose galactosyltransferase Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>PF13200 DUF4015: Putative glycosyl hydrolase domain Back     alignment and domain information
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins Back     alignment and domain information
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX Back     alignment and domain information
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase Back     alignment and domain information
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional Back     alignment and domain information
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02960 alpha-amylase Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN03244 alpha-amylase; Provisional Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive Back     alignment and domain information
>PLN02784 alpha-amylase Back     alignment and domain information
>PLN02361 alpha-amylase Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>PLN02877 alpha-amylase/limit dextrinase Back     alignment and domain information
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09505 malS alpha-amylase; Reviewed Back     alignment and domain information
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A Back     alignment and domain information
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15 Back     alignment and domain information
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4868 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
2g3m_A 693 Crystal Structure Of The Sulfolobus Solfataricus Al 1e-43
3l4t_A 875 Crystal Complex Of N-Terminal Human Maltase-Glucoam 3e-42
2qly_A 870 Crystral Structure Of The N-Terminal Subunit Of Hum 3e-42
3lpo_A 898 Crystal Structure Of The N-Terminal Domain Of Sucra 1e-38
3pha_A 667 The Crystal Structure Of The W169y Mutant Of Alpha- 9e-38
3nuk_A 666 The Crystal Structure Of The W169y Mutant Of Alpha- 9e-38
3m46_A 666 The Crystal Structure Of The D73a Mutant Of Glycosi 1e-37
3nsx_A 666 The Crystal Structure Of The The Crystal Structure 8e-37
3m6d_A 666 The Crystal Structure Of The D307a Mutant Of Glycos 8e-37
3n04_A 666 The Crystal Structure Of The Alpha-Glucosidase (Fam 8e-35
3ton_A 908 Crystral Structure Of The C-Terminal Subunit Of Hum 2e-23
4b9y_A 817 Crystal Structure Of Apo Agd31b, Alpha-transglucosy 3e-21
2x2h_A 1027 Crystal Structure Of The Gracilariopsis Lemaneiform 4e-16
2f2h_A 773 Structure Of The Yici Thiosugar Michaelis Complex L 3e-15
1xsi_A 778 Structure Of A Family 31 Alpha Glycosidase Length = 3e-15
1we5_A 772 Crystal Structure Of Alpha-Xylosidase From Escheric 5e-15
2xvg_A 1020 Crystal Structure Of Alpha-Xylosidase (Gh31) From C 2e-09
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha- Glucosidase Mala Length = 693 Back     alignment and structure 
Iteration: 1

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 42/310 (13%)
Query: 2   ILIREFVRFAGHFVRKVYPVMLYGWILTTWMDFVVSLLTRHRFPDPKSLAADLHLNGFKA 61
           I+ +E  R AG F+   Y   +  + L TW  +        RFP+PK L  +LH    K 
Sbjct: 198 IMQKEGFRVAGVFLDIHY---MDSYKLFTWHPY--------RFPEPKKLIDELHKRNVKL 246
Query: 62  IWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGS 121
           I ++D GI+ +  Y  + SG  +  + +   G  F+G++WPG  V+PD+ +   R WW  
Sbjct: 247 ITIVDHGIRVDQNYSPFLSG--MGKFCEIESGELFVGKMWPGTTVYPDFFREDTREWWAG 304
Query: 122 LVKDFIYNGVDGIWNDMNEPAVF------KSVTKTMPESNIHRGDDEI------------ 163
           L+ +++  GVDGIW DMNEP  F      + V  ++P   +   DD +            
Sbjct: 305 LISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLP---VQFRDDRLVTTFPDNVVHYL 361
Query: 164 -GGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSN 222
            G    H    N Y +  A +T++G + + +++  F+L+RAG+ G QRYA  WTGDN  +
Sbjct: 362 RGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNE-IFILSRAGYAGIQRYAFIWTGDNTPS 420
Query: 223 WEHLHMSISMVLQLGLSGQPFSGPDIGGFDG------NATPRLFGRWMGIGAMFPFCRGH 276
           W+ L + + +VL L +SG PF G DIGGF G      + +  L  ++  +   FPF R H
Sbjct: 421 WDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSH 480
Query: 277 TESDAIDHEP 286
             +D ID EP
Sbjct: 481 KATDGIDTEP 490
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase With Bj2661 Length = 875 Back     alignment and structure
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human Maltase- Glucoamylase Length = 870 Back     alignment and structure
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of Sucrase-Isomal Length = 898 Back     alignment and structure
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum Atcc 29174 In Complex With Acarbose Length = 667 Back     alignment and structure
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The D420a Mutant Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31) From Ruminococcus Obeum Atcc 29174 Length = 666 Back     alignment and structure
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human Maltase- Glucoamylase Length = 908 Back     alignment and structure
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 Length = 817 Back     alignment and structure
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis Alpha- 1,4-Glucan Lyase Length = 1027 Back     alignment and structure
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex Length = 773 Back     alignment and structure
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase Length = 778 Back     alignment and structure
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli Length = 772 Back     alignment and structure
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio Japonicus Length = 1020 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 1e-117
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 1e-114
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 1e-112
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 1e-108
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 1e-101
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 2e-94
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 3e-92
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 2e-86
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 2e-04
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Length = 693 Back     alignment and structure
 Score =  351 bits (903), Expect = e-117
 Identities = 93/279 (33%), Positives = 141/279 (50%), Gaps = 31/279 (11%)

Query: 41  RHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQKADGTPFIGEV 100
            +RFP+PK L  +LH    K I ++D GI+ +  Y  + SG  +  + +   G  F+G++
Sbjct: 226 PYRFPEPKKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSG--MGKFCEIESGELFVGKM 283

Query: 101 WPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVF---------------- 144
           WPG  V+PD+ +   R WW  L+ +++  GVDGIW DMNEP  F                
Sbjct: 284 WPGTTVYPDFFREDTREWWAGLISEWLSQGVDGIWLDMNEPTDFSRAIEIRDVLSSLPVQ 343

Query: 145 ---KSVTKTMPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLT 201
                +  T P++ +H      G    H    N Y +  A +T++G + + +    F+L+
Sbjct: 344 FRDDRLVTTFPDNVVHYLR---GKRVKHEKVRNAYPLYEAMATFKGFRTSHR-NEIFILS 399

Query: 202 RAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDG------NA 255
           RAG+ G QRYA  WTGDN  +W+ L + + +VL L +SG PF G DIGGF G      + 
Sbjct: 400 RAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDN 459

Query: 256 TPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVL 294
           +  L  ++  +   FPF R H  +D ID EP    +   
Sbjct: 460 SMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYK 498
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Length = 666 Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Length = 875 Back     alignment and structure
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Length = 898 Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Length = 773 Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Length = 1027 Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Length = 908 Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Length = 1020 Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
3nsx_A 666 Alpha-glucosidase; structural genomics, PSI-2, pro 100.0
3lpp_A 898 Sucrase-isomaltase; glycoside hydrolase family 31, 100.0
3l4y_A 875 Maltase-glucoamylase, intestinal; glycoside hydrol 100.0
3top_A 908 Maltase-glucoamylase, intestinal; membrane, hydrol 100.0
2g3m_A 693 Maltase, alpha-glucosidase; hydrolase, glycoside h 100.0
4ba0_A 817 Alpha-glucosidase, putative, ADG31B; hydrolase; HE 100.0
2f2h_A 773 Putative family 31 glucosidase YICI; BETA8alpha8 b 100.0
2xvl_A 1020 Alpha-xylosidase, putative, XYL31A; hydrolase, gly 100.0
2x2h_A 1027 Alpha-1,4-glucan lyase isozyme 1; anhydrofructose 100.0
2xn2_A732 Alpha-galactosidase; hydrolase, glycosidase; HET: 99.87
1zy9_A564 Alpha-galactosidase; TM1192, struc genomics, joint 99.82
3mi6_A 745 Alpha-galactosidase; NESG, structural genomics, PS 99.82
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 99.79
4fnq_A729 Alpha-galactosidase AGAB; glycoside hydrolase, hyd 99.53
3cc1_A433 BH1870 protein, putative alpha-N-acetylgalactosami 99.49
1uas_A362 Alpha-galactosidase; TIM-barrel, beta-alpha-barrel 99.07
1szn_A417 Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma 99.01
3a5v_A397 Alpha-galactosidase; beta/alpha barrel, N-glycosyl 99.0
3hg3_A 404 Alpha-galactosidase A; glycoprotein, carbohydrate- 98.97
3lrk_A 479 Alpha-galactosidase 1; tetramer, GH27, glycoprotei 98.83
3a21_A 614 Putative secreted alpha-galactosidase; beta-alpha- 98.68
4do4_A400 Alpha-N-acetylgalactosaminidase; pharmacological c 98.49
1lwj_A441 4-alpha-glucanotransferase; alpha-amylase family, 96.7
1gcy_A 527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 96.58
3dhu_A 449 Alpha-amylase; structural genomics, hydrolase, gly 96.58
2wsk_A 657 Glycogen debranching enzyme; carbohydrate metaboli 96.55
1wza_A 488 Alpha-amylase A; hydrolase, halophilic, thermophil 96.53
3aj7_A 589 Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro 96.53
1ea9_C583 Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A 96.48
2vr5_A 718 Glycogen operon protein GLGX; hydrolase, glycosida 96.4
1m53_A 570 Isomaltulose synthase; klebsiella SP. LX3, sucrose 96.39
4aie_A 549 Glucan 1,6-alpha-glucosidase; hydrolase, glycoside 96.36
3edf_A 601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 96.36
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 96.35
1ht6_A405 AMY1, alpha-amylase isozyme 1; barley, beta-alpha- 96.33
1zja_A 557 Trehalulose synthase; sucrose isomerase, alpha-amy 96.31
2wc7_A 488 Alpha amylase, catalytic region; CD/PUL-hydrolyzin 96.3
1uok_A 558 Oligo-1,6-glucosidase; sugar degradation, hydrolas 96.27
2ze0_A 555 Alpha-glucosidase; TIM barrel, glucoside hydrolase 96.27
3k1d_A 722 1,4-alpha-glucan-branching enzyme; mycobacterium t 96.26
3zss_A 695 Putative glucanohydrolase PEP1A; alpha-glucan bios 96.25
1m7x_A 617 1,4-alpha-glucan branching enzyme; alpha/beta barr 96.19
1wzl_A585 Alpha-amylase II; pullulan, GH-13, alpha-amylase f 96.17
2guy_A478 Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; 95.95
1bf2_A 750 Isoamylase; hydrolase, glycosidase, debranching en 95.91
2e8y_A 718 AMYX protein, pullulanase; multiple domain, beta-a 95.86
2aaa_A 484 Alpha-amylase; glycosidase; 2.10A {Aspergillus nig 95.82
2zic_A 543 Dextran glucosidase; TIM barrel, (beta/alpha)8-bar 95.81
2bhu_A 602 Maltooligosyltrehalose trehalohydrolase; alpha-amy 95.81
1g5a_A 628 Amylosucrase; glycosyltransferase, glycoside hydro 95.79
1j0h_A588 Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 95.78
2z1k_A475 (NEO)pullulanase; hydrolase, structural genomics, 95.76
4aee_A696 Alpha amylase, catalytic region; hydrolase, hypert 95.74
3m07_A 618 Putative alpha amylase; IDP00968, csgid, structura 95.72
3aml_A 755 OS06G0726400 protein; starch-branching, transferas 95.54
2wan_A 921 Pullulanase; hydrolase, glycoside hydrolase, polys 95.45
1jae_A 471 Alpha-amylase; glycosidase, carbohydrate metabolis 95.42
1ji1_A 637 Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 95.3
3faw_A 877 Reticulocyte binding protein; TIM barrel, beta bar 95.25
4gqr_A 496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 94.85
2ya0_A 714 Putative alkaline amylopullulanase; hydrolase, gly 94.72
2aam_A309 Hypothetical protein TM1410; structural genomics, 94.64
1g94_A 448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 94.64
1cyg_A 680 Cyclodextrin glucanotransferase; glycosyltransfera 94.56
3bc9_A599 AMYB, alpha amylase, catalytic region; acarbose, t 94.31
1d3c_A 686 Cyclodextrin glycosyltransferase; alpha-amylase, p 94.28
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 94.15
3bmv_A 683 Cyclomaltodextrin glucanotransferase; glycosidase, 94.14
3ucq_A 655 Amylosucrase; thermostability, amylose synthesis, 94.1
1ud2_A480 Amylase, alpha-amylase; calcium-free, alkaline, hy 94.03
3czg_A 644 Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 93.94
1hvx_A 515 Alpha-amylase; hydrolase, glycosyltransferase, the 93.76
2ya1_A 1014 Putative alkaline amylopullulanase; hydrolase, gly 93.68
3a24_A641 Alpha-galactosidase; glycoside hydrolase family 97 93.46
4aef_A645 Neopullulanase (alpha-amylase II); hydrolase, ther 93.13
3vgf_A 558 Malto-oligosyltrehalose trehalohydrolase; alpha/be 93.1
1wpc_A485 Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr 92.79
1qho_A 686 Alpha-amylase; glycoside hydrolase, starch degrada 92.65
1mxg_A435 Alpha amylase; hyperthermostable, family 13 glycos 91.6
3k8k_A 669 Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet 91.16
2fhf_A 1083 Pullulanase; multiple domain, beta-alpha-barrel, a 90.48
4aio_A 884 Limit dextrinase; hydrolase, pullulanase, glycosid 90.15
2dh2_A 424 4F2 cell-surface antigen heavy chain; TIM-barrel, 89.89
2d73_A738 Alpha-glucosidase SUSB; glycoside hydrolase family 88.67
1gjw_A637 Maltodextrin glycosyltransferase; alpha-amylase, m 88.34
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 85.62
1r7a_A 504 Sucrose phosphorylase; beta-alpha-barrels, dimer, 84.23
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A* Back     alignment and structure
Probab=100.00  E-value=5.5e-79  Score=613.51  Aligned_cols=297  Identities=30%  Similarity=0.597  Sum_probs=271.0

Q ss_pred             HHHHHHHHHHHhHHhCCcceEEEeeecccCC-CcceeeCCCCCCChHHHHHHHHhCCCeEEEEeCCccccCCCccccccc
Q 021612            3 LIREFVRFAGHFVRKVYPVMLYGWILTTWMD-FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSG   81 (310)
Q Consensus         3 ~~~~v~~~~~~~~~~~iP~d~~~~~d~~w~~-~~~ft~d~~~Fpdp~~mi~~L~~~G~k~~~~v~P~i~~~~~~~~y~~~   81 (310)
                      .+++|++++++|++++||||+| |+|.+|++ +++||||+++||||++|+++||++|+|+++||+|+|..+++|.+|+++
T Consensus       176 ~~~~v~~v~~~~~~~~IP~dvi-~lD~dy~~~~~~ft~d~~~FPdp~~mv~~Lh~~G~k~v~~idP~i~~~~~~~~y~e~  254 (666)
T 3nsx_A          176 TKEDFRAVAKGYRENHIPIDMI-YMDIDYMQDFKDFTVNEKNFPDFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEG  254 (666)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCEE-EECGGGSSTTCTTCCCTTTCTTHHHHHHHHHTTTCEEEEEEESCEECCTTCHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCcceE-EEecHHHHhhcccccChhhCCCHHHHHHHHHHcCceEEeeeccceeeecCchHHhhh
Confidence            4789999999999999999997 56999998 899999999999999999999999999999999999988888999999


Q ss_pred             cccceeEecCCCCceeEeecCCCccCCCCCCHHHHHHHHHHHHhHHhCCccEEEecCCCCcccCCCCC------------
Q 021612           82 SKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTK------------  149 (310)
Q Consensus        82 ~~~~~~v~~~~g~~~~~~~w~G~~~~~Dft~p~a~~ww~~~~~~~~~~Gvdg~w~D~~e~~~~~~~~~------------  149 (310)
                      +++++||++++|+++++.+|||.+++||||||+|++||.++++.+++.||||||+|||||+.|+..+.            
T Consensus       255 ~~~g~fvk~~~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~~~Gidg~W~DmnEp~~f~~~~~~~~~~~~~~~~~  334 (666)
T 3nsx_A          255 VKNNYFCKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLIDQGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFA  334 (666)
T ss_dssp             HHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHTTTCCEEEEESTTTCCSEEHHHHHHHHHHHHHHH
T ss_pred             cccCccccCCCCCcceEEecCCccCCccccCHHHHHHhhhhhhHHHhccchhhhhccCCcceEecHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999998853210            


Q ss_pred             ----CCC-------------C------CCcCCCCCCCCCccccchhhhhhHHHHHHHHHHHhhhhcCCCCcEEEEcccCC
Q 021612          150 ----TMP-------------E------SNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFI  206 (310)
Q Consensus       150 ----~lp-------------~------~~~~~g~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~  206 (310)
                          .++             .      ...|..+   |+...|+++||+|++++++|+++++++..+++|||++|||+++
T Consensus       335 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~h~~~---g~~~~~~~~hNlYg~~~~~at~e~l~~~~~~~RpfilsRS~~a  411 (666)
T 3nsx_A          335 KDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVN---GKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYI  411 (666)
T ss_dssp             HCCSSCSCHHHHHHHHHHTTTCHHHHTSCEEEET---TEEEEGGGGGGGHHHHHHHHHHHHHHHHCTTCCCEEEESSEET
T ss_pred             ccccchhhhhhHHHHHhhhcCChHHHHHHhhhcC---CeEEehhhhhhhhccchhHHHHHHHHhhCCCceEEEEecccee
Confidence                010             0      0011111   2234688999999999999999999998889999999999999


Q ss_pred             CCCCcceeeCCCCCCCchHHHHHHHHHHHhhhcCCCccccCCCCCCCCCChhHHHHHHHhhhhccccccCCCCCCCCCCC
Q 021612          207 GSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEP  286 (310)
Q Consensus       207 G~~r~~~~w~GD~~ssW~~L~~~i~~~l~~~l~G~p~~g~DIgGf~g~~~~EL~~RW~Q~g~f~P~~r~h~~~~~~~~eP  286 (310)
                      |+|||+++|+||+.|+|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+|+||+|+..++.++||
T Consensus       412 Gsqry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~eP  491 (666)
T 3nsx_A          412 GMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQEC  491 (666)
T ss_dssp             TGGGTCEEEECCSSCCTHHHHHHHHHHHHHHHTTCCSEEECCCCCBTCSCHHHHHHHHHHHTTSSSEEEEECSSBCCCCG
T ss_pred             ceeecCceecCCCccHHHHHHHhhhhccccccceeeeeccccCcCCCCchHHHHHHHHHHhcCchhhhcccccCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988788999


Q ss_pred             cccChhhHHHHHHHHHHHh
Q 021612          287 WSFGEEVLFCSSIVIIAFF  305 (310)
Q Consensus       287 w~~~~~~~~~~r~~i~~~~  305 (310)
                      |.|+  +.+++|++|+...
T Consensus       492 w~~~--~~~~~r~~i~lRy  508 (666)
T 3nsx_A          492 YQFE--NIEDFRSVINARY  508 (666)
T ss_dssp             GGST--TTHHHHHHHHHHH
T ss_pred             cccC--CHHHHHHHhhhhh
Confidence            9999  9999999998643
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A* Back     alignment and structure
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A* Back     alignment and structure
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A* Back     alignment and structure
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A* Back     alignment and structure
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A* Back     alignment and structure
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A* Back     alignment and structure
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A* Back     alignment and structure
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A* Back     alignment and structure
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Back     alignment and structure
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A* Back     alignment and structure
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Back     alignment and structure
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Back     alignment and structure
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Back     alignment and structure
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Back     alignment and structure
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A* Back     alignment and structure
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Back     alignment and structure
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} Back     alignment and structure
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Back     alignment and structure
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A Back     alignment and structure
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Back     alignment and structure
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Back     alignment and structure
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Back     alignment and structure
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Back     alignment and structure
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Back     alignment and structure
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Back     alignment and structure
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* Back     alignment and structure
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Back     alignment and structure
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* Back     alignment and structure
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Back     alignment and structure
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Back     alignment and structure
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Back     alignment and structure
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Back     alignment and structure
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} Back     alignment and structure
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A Back     alignment and structure
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} Back     alignment and structure
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Back     alignment and structure
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Back     alignment and structure
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* Back     alignment and structure
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15 Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Back     alignment and structure
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Back     alignment and structure
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Back     alignment and structure
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Back     alignment and structure
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Back     alignment and structure
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} Back     alignment and structure
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} Back     alignment and structure
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A Back     alignment and structure
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Back     alignment and structure
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Back     alignment and structure
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Back     alignment and structure
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Back     alignment and structure
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* Back     alignment and structure
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A Back     alignment and structure
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Back     alignment and structure
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A* Back     alignment and structure
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 310
d2f2ha4338 c.1.8.13 (A:248-585) Putative glucosidase YicI, do 1e-59
d1zy9a2348 c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata 4e-11
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Length = 338 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

 Score =  192 bits (488), Expect = 1e-59
 Identities = 59/264 (22%), Positives = 101/264 (38%), Gaps = 22/264 (8%)

Query: 31  WMDFVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDSGSKIDVWIQK 90
           W DF         FPDP+ +   L   G K    ++P I  +    V+    +    +++
Sbjct: 68  WCDFEWD---PLTFPDPEGMIRRLKAKGLKICVWINPYIGQK--SPVFKELQEKGYLLKR 122

Query: 91  ADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKT 150
            DG+ +  + W       D+T      W+   +K  +  GVD    D  E          
Sbjct: 123 PDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPT------ 176

Query: 151 MPESNIHRGDDEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQR 210
                    D +     +    HN Y  +     +  +K    ++   +  R+  +G+Q+
Sbjct: 177 ---------DVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQK 227

Query: 211 YAATWTGDNVSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFDGNATPRLFGRWMGIGAMF 270
           +   W GD  +N+E +  S+   L +GLSG  F   DIGGF+  A   ++ RW   G + 
Sbjct: 228 FPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLS 287

Query: 271 PFCRGHTESDAIDHEPWSFGEEVL 294
              R H         PW++ +E  
Sbjct: 288 SHSRLH--GSKSYRVPWAYDDESC 309
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
d2f2ha4338 Putative glucosidase YicI, domain 2 {Escherichia c 100.0
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 99.84
d1szna2314 Melibiase {Trichoderma reesei [TaxId: 51453]} 99.32
d1uasa2273 Melibiase {Rice (Oryza sativa) [TaxId: 4530]} 99.23
d1r46a2292 Melibiase {Human (Homo sapiens) [TaxId: 9606]} 98.82
d1ktba2293 Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} 98.58
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 97.27
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 97.16
d2bhua3420 Glycosyltrehalose trehalohydrolase, central domain 96.99
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 96.94
d1j0ha3382 Neopullulanase, central domain {Bacillus stearothe 96.85
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 96.81
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 96.63
d1m53a2 478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 96.6
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 96.58
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 96.56
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 96.54
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 96.48
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 96.41
d1eh9a3400 Glycosyltrehalose trehalohydrolase, central domain 96.37
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 96.31
d1uoka2 479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 96.3
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 96.2
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 95.92
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 95.74
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 95.6
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 95.48
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 95.43
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 95.41
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 95.16
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 95.09
d1g5aa2554 Amylosucrase {Neisseria polysaccharea [TaxId: 489] 94.95
d2aama1285 Hypothetical protein TM1410 {Thermotoga maritima [ 94.68
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 91.17
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 88.61
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 87.98
d1edta_265 Endo-beta-N-acetylglucosaminidase {Streptomyces pl 86.36
d2fhfa5 563 Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 84.63
d2ebna_285 Endo-beta-N-acetylglucosaminidase {Flavobacterium 83.07
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 82.44
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Putative glucosidase YicI, domain 2
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-71  Score=517.02  Aligned_cols=281  Identities=21%  Similarity=0.400  Sum_probs=258.2

Q ss_pred             HHHHHHHHHHhHHhCCcceEEEeeecccCC---CcceeeCCCCCCChHHHHHHHHhCCCeEEEEeCCccccCCCcccccc
Q 021612            4 IREFVRFAGHFVRKVYPVMLYGWILTTWMD---FVVSLLTRHRFPDPKSLAADLHLNGFKAIWMLDPGIKHEDGYFVYDS   80 (310)
Q Consensus         4 ~~~v~~~~~~~~~~~iP~d~~~~~d~~w~~---~~~ft~d~~~Fpdp~~mi~~L~~~G~k~~~~v~P~i~~~~~~~~y~~   80 (310)
                      +++|+++++++|+++||||+++ +|.+|++   +.+|+||+++||||++|+++||++|+|+++|++|+|..++.  .|++
T Consensus        36 ~~~v~~~~~~~r~~~iP~d~i~-iD~~w~~~~~~~~f~~d~~~FPdp~~~i~~l~~~G~~~~l~~~P~i~~~~~--~~~~  112 (338)
T d2f2ha4          36 EATVNSFIDGMAERNLPLHVFH-FDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSP--VFKE  112 (338)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEE-ECGGGBCTTCCSSCCBCTTTCSCHHHHHHHHHHTTCEEEEEECSEECTTST--THHH
T ss_pred             HHHHHHHHHHHHHcCCCcceEE-EcCchhcCCCcCceeeCcccCCCHHHHHHHHHHCCCeEEEeecCccCCCCh--hHHH
Confidence            5679999999999999999975 6999997   46999999999999999999999999999999999988764  7899


Q ss_pred             ccccceeEecCCCCceeEeecCCCccCCCCCCHHHHHHHHHHHHhHHhCCccEEEecCCCCcccCCCCCCCCCCCcCCCC
Q 021612           81 GSKIDVWIQKADGTPFIGEVWPGPCVFPDYTQSKVRSWWGSLVKDFIYNGVDGIWNDMNEPAVFKSVTKTMPESNIHRGD  160 (310)
Q Consensus        81 ~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dft~p~a~~ww~~~~~~~~~~Gvdg~w~D~~e~~~~~~~~~~lp~~~~~~g~  160 (310)
                      +.++++++++++|+++.+.+|+|.++++||+||+|++||.+.++.+++.||||||+|++|+..+         +..+.+.
T Consensus       113 ~~~~g~~~~~~~g~~~~~~~~~~~~~~~D~tnp~a~~w~~~~~~~~~~~Gidg~w~D~~e~~~~---------d~~~~~~  183 (338)
T d2f2ha4         113 LQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPT---------DVQWFDG  183 (338)
T ss_dssp             HHHHTCBCBCTTSSBCCBSSSSTTBEEBCTTSHHHHHHHHHHHHHHHHTTCCEEEECCCCCCCS---------SSBCTTC
T ss_pred             HHhCCEEEECCCCCceeeecCCCCccccccCCHHHHHHHHHHhhcccccCCceEEecCCCCCCC---------ccccccC
Confidence            9999999999999999999999999999999999999999999999999999999999996432         2222211


Q ss_pred             CCCCCccccchhhhhhHHHHHHHHHHHhhhhcCCCCcEEEEcccCCCCCCcceeeCCCCCCCchHHHHHHHHHHHhhhcC
Q 021612          161 DEIGGCQNHSYYHNVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISMVLQLGLSG  240 (310)
Q Consensus       161 ~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~~r~~~~w~GD~~ssW~~L~~~i~~~l~~~l~G  240 (310)
                            ..+.++||+|++++++++++++++..+++|+++++||+++|+|||+++|+||+.++|++|+.+|+.+|++|++|
T Consensus       184 ------~~~~~~~n~y~~~~~~~~~~~~~~~~~~~r~~~~~rs~~~Gsqry~~~W~GD~~s~w~~L~~~i~~~l~~~l~G  257 (338)
T d2f2ha4         184 ------SDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSG  257 (338)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred             ------cchhhhcchhHHHHHHHHHHHHHHhccccccceeeccccccccccceEecCCCCCChHHHHHHHHHHHHHHHcC
Confidence                  15678999999999999999999887789999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCCCCChhHHHHHHHhhhhccccccCCCCCCCCCCCcccChhhHHHHHHHHHHH
Q 021612          241 QPFSGPDIGGFDGNATPRLFGRWMGIGAMFPFCRGHTESDAIDHEPWSFGEEVLFCSSIVIIAF  304 (310)
Q Consensus       241 ~p~~g~DIgGf~g~~~~EL~~RW~Q~g~f~P~~r~h~~~~~~~~ePw~~~~~~~~~~r~~i~~~  304 (310)
                      +|++|+|||||.+++++|||+||+|+|+|+|+||+|+..  ..++||.|++++++++|++|+-.
T Consensus       258 ~p~~g~DigGf~~~~~~EL~~RW~q~~~f~P~~r~h~~~--~~~~Pw~~~~~~~~~~r~~~~lR  319 (338)
T d2f2ha4         258 FGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFTQLK  319 (338)
T ss_dssp             CCCEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHHHHH
T ss_pred             CCccCCCcCCCCCCCCHHHHHHHHHHHhcchheecCCCC--CCCCCccCChHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999875  46899999999999999998754
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Back     information, alignment and structure
>d2aama1 c.1.8.15 (A:28-312) Hypothetical protein TM1410 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} Back     information, alignment and structure
>d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure