Citrus Sinensis ID: 021622

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccEEEEccEEEEccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEcccccccccccEHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEcccccHHHHHHHHHHcccccEEEEccccccEEccccEHccccEEEEccEEEEEEEHEEEEEcccc
Coil and Loop (DISEMBL)
MASRKLVRDLFlsrqrprflqltplqgsstRLRLVsangyssnrqfSVFKEFSKKIkgeaesnpefKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVkgtfrtgstdtsakhdddvrdgfkassgeekqkqtvssDTAETFYGKlkssisspKFTLAFQKLKEAKVVDLAKKGYDivkdelsgspskrkhleytpspswtgekstrtdlvvtpskKSMWSKLKEKmqgypvfkritgisepvvtkgqevcsnrllltsscfisfdiahcisidwqk
Flexible Loop (DISEMBL)
masrklvrdlflsrqrprflqltplqgsstrlRLVSangyssnrqfsvFKEFSKKikgeaesnpefkhsvkELKKKAEeikgvkeelkertkqtteqlykqvdgvWMEAESTVKKVSASMKEKISaateevkgtfrtgstdtsakhdddvrdgfkassgeekqkqtvssdtaETFYGklkssisspKFTLAFQKLKEAKVVDLAKKGYDIVkdelsgspskrkhleytpspswtgekstrtdlvvtpskksmwskLKEKMQGYPVFKRITGisepvvtkgQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Low Complexity Region (SEG)
MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Disordered region (IsUnstruct)
**********F*******FL********************************************************************************QVDGVWM*******************************************************************************KFTLAFQKLKEAKVVDLAKKGYDIV***********************************************KMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDW**
Disordered Region (DISOPRED)
****KLV*DLFLSRQRP******************************VFKEF***********************************************************************************************************************************************************************************************VVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQ*
Disordered Region (DISEMBL)
MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGF****************TAETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Disordered Region (DISPRO)
***RKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAAT*************************************************KLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELS************************TDLVVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEAESNPEFKHSxxxxxxxxxxxxxxxxxxxxxxxxxxxxLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKSMWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSNRLLLTSSCFISFDIAHCISIDWQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
Q5XF06	469	Mitochondrial import inne	yes	no	0.893	0.590	0.575	2e-86
Q1PF33	474	Mitochondrial import inne	no	no	0.903	0.590	0.527	2e-77

>sp|Q5XF06|TI442_ARATH Mitochondrial import inner membrane translocase subunit TIM44-2 OS=Arabidopsis thaliana GN=TIM44-2 PE=1 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 167/290 (57%), Positives = 219/290 (75%), Gaps = 13/290 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           MASRKLVRDL +++Q P   QL   +    RL L+  NG++S+R+FSVF EFSKKI+GEA
Sbjct: 1   MASRKLVRDLLITKQ-PLLQQLVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGEA 59

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
           +SNPEF+ +VKE K++AEE++GVKE+LK RTKQTTE+LYKQ  GVW EAES  KKVS+S+
Sbjct: 60  DSNPEFQKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSV 119

Query: 121 KEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLK 180
           K+K SAATEEVK +F+ G  +++         G   + GE++Q+Q+ S++  +TF+GK K
Sbjct: 120 KDKFSAATEEVKESFKLGKEESAESA---SSSGTGTTEGEKQQQQSGSTEEQDTFFGKFK 176

Query: 181 SSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTR 240
           SSISSPK + AF      K +D AKKG DIVKDEL G+PSKRKHLEYTP P +TGE+STR
Sbjct: 177 SSISSPKLSEAFH-----KPLDFAKKGLDIVKDELRGNPSKRKHLEYTPPPPFTGERSTR 231

Query: 241 TDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           T++V+ P+K+S W K    L+EKMQGYPVFKR++G+SEPVV K QE+  +
Sbjct: 232 TEMVIMPTKQSKWQKKWESLREKMQGYPVFKRLSGMSEPVVNKSQEIAED 281

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Recruits mitochondrial HSP70 to drive protein translocation into the matrix using ATP as an energy source.
Arabidopsis thaliana (taxid: 3702)

>sp|Q1PF33|TI441_ARATH Mitochondrial import inner membrane translocase subunit TIM44-1 OS=Arabidopsis thaliana GN=TIM44-1 PE=2 SV=1

 Score =  289 bits (739), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 211/292 (72%), Gaps = 12/292 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQL--TPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKG 58
           MA RK++RDL +++Q P   QL    +  ++ R   + A GY+S+R+FSVF EFSK I+G
Sbjct: 1   MAIRKIIRDLLITKQ-PLLRQLFHQRVLRANARSEFLPAIGYTSHRRFSVFTEFSKNIRG 59

Query: 59  EAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSA 118
           EA SNPEF+ +VKELK++ EE KGV E+LK RTKQTTE+LYKQ DGVW EAES  KKVS+
Sbjct: 60  EAHSNPEFERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQADGVWTEAESAAKKVSS 119

Query: 119 SMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGK 178
           S+K+K+SAA+EEVK +F+ G  + +   +     G +AS GE  ++Q+ S++   TF+ K
Sbjct: 120 SVKDKLSAASEEVKESFKLGKEENA---ESASSSGTRASQGE--KQQSGSTEELHTFFAK 174

Query: 179 LKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKS 238
            KSS+SSPK +  F +LKEAK  D+ K+  DIVKDEL G+PS++K LE+TP P +TGE+S
Sbjct: 175 FKSSLSSPKVSEVFYRLKEAKPFDIVKQALDIVKDELRGNPSRKKFLEHTPPPPFTGERS 234

Query: 239 TRTDLVVTPSKKS----MWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
            RT++VVT +K+S     W   +EKMQG PVFKR++G+SEPVV K QE+  +
Sbjct: 235 MRTEMVVTQTKQSKLQQKWESFREKMQGSPVFKRLSGMSEPVVNKSQEIAED 286

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Recruits mitochondrial HSP70 to drive protein translocation into the matrix using ATP as an energy source.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
224062145	484	predicted protein [Populus trichocarpa]	0.919	0.588	0.639	2e-95
225438141	485	PREDICTED: mitochondrial import inner me	0.919	0.587	0.644	1e-93
255567254	486	mitochondrial import inner membrane tran	0.919	0.586	0.645	1e-91
297744147	484	unnamed protein product [Vitis vinifera]	0.916	0.586	0.634	8e-90
224085633	485	predicted protein [Populus trichocarpa]	0.919	0.587	0.624	1e-88
42569661	469	translocase inner membrane subunit 44-2	0.893	0.590	0.575	1e-84
449526090	484	PREDICTED: uncharacterized protein LOC10	0.912	0.584	0.593	1e-81
297836804	477	mitochondrial import inner membrane tran	0.906	0.589	0.564	2e-80
297827085	469	attim44-2 [Arabidopsis lyrata subsp. lyr	0.9	0.594	0.565	7e-79
18399377	472	translocase inner membrane subunit 44-1	0.903	0.593	0.531	7e-77

>gi|224062145|ref|XP_002300777.1| predicted protein [Populus trichocarpa] gi|222842503|gb|EEE80050.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 190/297 (63%), Positives = 230/297 (77%), Gaps = 12/297 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANG--YSSNRQFSVFKEFSKKIKG 58
           MASRKLVRDLFLSRQ P FL+LT  Q S  RL+++S +G  Y   R+FSVF EFS K+KG
Sbjct: 1   MASRKLVRDLFLSRQ-PLFLRLTSKQVSGRRLQVLSNHGCTYYGYRRFSVFNEFSNKVKG 59

Query: 59  EAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSA 118
           EA+ N EFK SVKELK+KAEE+KG KEELK RTKQTTEQLYK VDGVW EAE+T KKVSA
Sbjct: 60  EADRNQEFKQSVKELKEKAEELKGAKEELKVRTKQTTEQLYKHVDGVWTEAEATAKKVSA 119

Query: 119 SMKEKISAATEEVKGTFRTG-----STDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAE 173
           ++KEKISAATEEVK TF  G     S  TSAK      +G KAS+GEE  KQT + DTAE
Sbjct: 120 NVKEKISAATEEVKETFGIGKESSESAGTSAKDGAGAEEGTKASTGEEADKQTGTGDTAE 179

Query: 174 TFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSW 233
           +F+GK KS I S   + A+QKLKEA+V ++ KKGYD+VKDEL G+ +KRKHLE+TP P++
Sbjct: 180 SFFGKFKSRIPSSNVSSAYQKLKEARVSEMMKKGYDVVKDELYGNTNKRKHLEHTPPPAF 239

Query: 234 TGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           +GE ST+TD+VV PSK+S WSK     +EKMQG+P+FKR +G+SEPVVTKGQE+  +
Sbjct: 240 SGEISTKTDVVVLPSKQSRWSKKWEAFREKMQGHPLFKRFSGLSEPVVTKGQEIAED 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438141|ref|XP_002278528.1| PREDICTED: mitochondrial import inner membrane translocase subunit tim44-like [Vitis vinifera]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 192/298 (64%), Positives = 228/298 (76%), Gaps = 13/298 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           M SRKLVRDL+LS+Q      L+  Q SS RLRL+S NG S  R FSVF EFS KIKGE 
Sbjct: 1   MGSRKLVRDLYLSKQPLLLHLLSSQQASSARLRLISPNGCSGYRGFSVFNEFSNKIKGEV 60

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
             N EF+ +VKELK+KAEE+KGVKEELK RTKQTTEQLYK VDGVW EAE+T KKVSA++
Sbjct: 61  NRNSEFQQTVKELKEKAEELKGVKEELKVRTKQTTEQLYKHVDGVWTEAEATAKKVSANV 120

Query: 121 KEKISAATEEVKGTFRTG------STDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAET 174
           KEKISAATE+VK TF  G      S  TSAK + DV  G  +SSGEEK  ++  SDTAET
Sbjct: 121 KEKISAATEDVKETFGKGKQEFSESAGTSAKSEADVNKG-SSSSGEEKHHKSGPSDTAET 179

Query: 175 FYGKLKSSIS--SPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPS 232
            +GK KSS+S  SPK +LAF+KLKEAKV+DLAKKGY IVKDELS +PSKRK ++   S +
Sbjct: 180 LFGKFKSSVSTVSPKVSLAFEKLKEAKVLDLAKKGYGIVKDELSSNPSKRKQMQRAASSA 239

Query: 233 WTGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
             GE+ST+TD+V+ PSK+S WSK    LK+KMQG+PVFKRI+G+SEPVVTKGQE+  +
Sbjct: 240 SPGERSTKTDIVIVPSKQSRWSKKWEALKDKMQGHPVFKRISGLSEPVVTKGQELAED 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567254|ref|XP_002524608.1| mitochondrial import inner membrane translocase subunit tim44, putative [Ricinus communis] gi|223536161|gb|EEF37816.1| mitochondrial import inner membrane translocase subunit tim44, putative [Ricinus communis]

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 193/299 (64%), Positives = 224/299 (74%), Gaps = 14/299 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSA--NGYSSN-RQFSVFKEFSKKIK 57
           MA +KLVRDLFLSRQ P FL LT  QGS TRLRL S   NG +   R F VF EFSKK+K
Sbjct: 1   MAGKKLVRDLFLSRQ-PLFLHLTSQQGSRTRLRLPSTLPNGKNMGYRGFGVFSEFSKKVK 59

Query: 58  GEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVS 117
           GE   + EF+ SVKELK KAEE+KGVKE+L+ RTK+TTEQLYK VDG W EAE+T KKVS
Sbjct: 60  GEVTRSQEFQQSVKELKDKAEELKGVKEDLRIRTKETTEQLYKHVDGAWTEAEATAKKVS 119

Query: 118 ASMKEKISAATEEVKGTFR------TGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDT 171
           A++KEKISAA EEVK T        +GST +S K   DV+D  K+SSGEE  +QT SSD 
Sbjct: 120 ANVKEKISAAKEEVKETLNIGKQESSGSTKSSDKDGADVKDDKKSSSGEETDEQTGSSDN 179

Query: 172 AETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSP 231
           AE+F+GK KSS  S K + AFQKLKEAKV D  KKGYD+VKDEL G+PSKRKHLEYTP P
Sbjct: 180 AESFFGKFKSSTPSSKLSSAFQKLKEAKVTDFVKKGYDVVKDELYGNPSKRKHLEYTPPP 239

Query: 232 SWTGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           S+ GE STRTD+VV PSK+S W+K     +EKMQG+P+FKR  GISEPVVTK QE+  +
Sbjct: 240 SFKGETSTRTDIVVLPSKQSRWNKKWEAFREKMQGHPLFKRFAGISEPVVTKSQEIAED 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744147|emb|CBI37117.3| unnamed protein product [Vitis vinifera]

 Score =  336 bits (861), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 189/298 (63%), Positives = 225/298 (75%), Gaps = 14/298 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           M SRKLVRDL+LS+Q      L+  Q SS RLRL+S NG S  R FSVF EFS KIKGE 
Sbjct: 1   MGSRKLVRDLYLSKQPLLLHLLSSQQASSARLRLISPNGCSGYRGFSVFNEFSNKIKGEV 60

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
             N EF+ +VKELK+KAEE+KGVKEELK RTKQTTEQLYK VDGVW EAE+T KKVSA++
Sbjct: 61  NRNSEFQQTVKELKEKAEELKGVKEELKVRTKQTTEQLYKHVDGVWTEAEATAKKVSANV 120

Query: 121 KEKISAATEEVKGTFRTG------STDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAET 174
           KEKISAATE+VK TF  G      S  TSAK + DV  G  +SSGEEK  ++  SDTAET
Sbjct: 121 KEKISAATEDVKETFGKGKQEFSESAGTSAKSEADVNKG-SSSSGEEKHHKSGPSDTAET 179

Query: 175 FYGKLKSSIS--SPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPS 232
            +GK KSS+S  SPK +LAF+KLKEAKV+DLAKKGY IVKDELS +PSKRK ++   S +
Sbjct: 180 LFGKFKSSVSTVSPKVSLAFEKLKEAKVLDLAKKGYGIVKDELSSNPSKRKQMQRAASSA 239

Query: 233 WTGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
             GE+ST+TD+V+ PSK+S WSK    LK+K   +PVFKRI+G+SEPVVTKGQE+  +
Sbjct: 240 SPGERSTKTDIVIVPSKQSRWSKKWEALKDKA-SHPVFKRISGLSEPVVTKGQELAED 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085633|ref|XP_002307643.1| predicted protein [Populus trichocarpa] gi|222857092|gb|EEE94639.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/298 (62%), Positives = 223/298 (74%), Gaps = 13/298 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANG--YSSNRQFSVFKEFSKKIKG 58
           MASRKLVRDL LSRQ P FL     Q  S+RL++VS  G  YS  R+FSVF EFSKK+KG
Sbjct: 1   MASRKLVRDLVLSRQ-PLFLHFISKQVPSSRLQVVSNYGCPYSGYRRFSVFNEFSKKVKG 59

Query: 59  EAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSA 118
           EA+ N EFK SVKELK+KAEE+KGVKEELK RTKQTTE+LYK VD VW EAE+T KKVSA
Sbjct: 60  EAQINLEFKQSVKELKEKAEELKGVKEELKVRTKQTTEKLYKHVDCVWTEAEATAKKVSA 119

Query: 119 SMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGF------KASSGEEKQKQTVSSDTA 172
           ++KEK+SAATEEVK TF  G  ++S       +DG       KA  GEE  KQT +SDTA
Sbjct: 120 NVKEKVSAATEEVKETFGIGKEESSESAGTSAKDGVGAEECRKAFPGEEADKQTGTSDTA 179

Query: 173 ETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPS 232
           ET +GK KSSI S K + AFQKLKEA+V ++ KKGYD+VKDEL G+ + RKHLEYTP PS
Sbjct: 180 ETLFGKFKSSIPSSKVSSAFQKLKEARVSEMMKKGYDVVKDELYGNTNTRKHLEYTPPPS 239

Query: 233 WTGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           ++GE ST+TD+ V PSK+S WSK    ++EKMQG+P+FK   G+SEPVVTKG E+  +
Sbjct: 240 FSGEISTKTDIAVLPSKQSRWSKKWEAIREKMQGHPLFKHFAGLSEPVVTKGHEIAED 297

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569661|ref|NP_181151.3| translocase inner membrane subunit 44-2 [Arabidopsis thaliana] gi|75110963|sp|Q5XF06.1|TI442_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM44-2; Flags: Precursor gi|53828527|gb|AAU94373.1| At2g36070 [Arabidopsis thaliana] gi|330254108|gb|AEC09202.1| translocase inner membrane subunit 44-2 [Arabidopsis thaliana]

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 167/290 (57%), Positives = 219/290 (75%), Gaps = 13/290 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           MASRKLVRDL +++Q P   QL   +    RL L+  NG++S+R+FSVF EFSKKI+GEA
Sbjct: 1   MASRKLVRDLLITKQ-PLLQQLVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGEA 59

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
           +SNPEF+ +VKE K++AEE++GVKE+LK RTKQTTE+LYKQ  GVW EAES  KKVS+S+
Sbjct: 60  DSNPEFQKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSV 119

Query: 121 KEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLK 180
           K+K SAATEEVK +F+ G  +++         G   + GE++Q+Q+ S++  +TF+GK K
Sbjct: 120 KDKFSAATEEVKESFKLGKEESAESA---SSSGTGTTEGEKQQQQSGSTEEQDTFFGKFK 176

Query: 181 SSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTR 240
           SSISSPK + AF      K +D AKKG DIVKDEL G+PSKRKHLEYTP P +TGE+STR
Sbjct: 177 SSISSPKLSEAFH-----KPLDFAKKGLDIVKDELRGNPSKRKHLEYTPPPPFTGERSTR 231

Query: 241 TDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           T++V+ P+K+S W K    L+EKMQGYPVFKR++G+SEPVV K QE+  +
Sbjct: 232 TEMVIMPTKQSKWQKKWESLREKMQGYPVFKRLSGMSEPVVNKSQEIAED 281

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449526090|ref|XP_004170047.1| PREDICTED: uncharacterized protein LOC101231997 [Cucumis sativus]

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 175/295 (59%), Positives = 219/295 (74%), Gaps = 12/295 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           MA RKLVRD+ LSRQ   + Q T    S TR +L+  +GYS NR+FSVF EFSKK+KGEA
Sbjct: 1   MAGRKLVRDILLSRQSIVY-QFTSHGSSCTRSQLLLPSGYSINRRFSVFNEFSKKVKGEA 59

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
           + N EF+ SVKELK+KAEE+KGVKE+LK RTKQTTEQ+YKQVDGVW EAE+T +KVSA +
Sbjct: 60  DKNTEFQQSVKELKEKAEELKGVKEDLKVRTKQTTEQIYKQVDGVWSEAEATARKVSADV 119

Query: 121 KEKISAATEEVKGTF------RTGSTDTSAKHDDDV-RDGFKASSGEEKQKQTVSSDTAE 173
           KEK+SAATEEVK  F       +GST +S  H  D  + G +ASS   K +   SS ++E
Sbjct: 120 KEKLSAATEEVKEAFGFSPKNSSGSTCSSTDHGADAKKHGSEASSENAKDQHPGSSGSSE 179

Query: 174 TFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSW 233
           TF+GK KSSI SP  + AF++LK  K++DLAK+G +IVKDELSG P K+KHLEY  S S 
Sbjct: 180 TFFGKFKSSIPSPGISSAFERLKSTKLIDLAKRGCEIVKDELSGKPHKKKHLEYEASASP 239

Query: 234 TGEKSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVC 284
             E+STRTD+VV PSK+S WSK     +EKMQG+PV+KR+TG SEPV+++ QE+ 
Sbjct: 240 KVERSTRTDVVVLPSKQSRWSKKWEAFREKMQGHPVYKRVTGYSEPVISRSQEMA 294

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836804|ref|XP_002886284.1| mitochondrial import inner membrane translocase subunit TIM44 [Arabidopsis lyrata subsp. lyrata] gi|297332124|gb|EFH62543.1| mitochondrial import inner membrane translocase subunit TIM44 [Arabidopsis lyrata subsp. lyrata]

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/294 (56%), Positives = 220/294 (74%), Gaps = 13/294 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQL---TPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIK 57
           MA+RK++RDL +++Q P   QL     L+G+ TR   + A GYSS+R+FSVF EFSK I+
Sbjct: 1   MATRKIIRDLLITKQ-PLLRQLFHQRVLRGN-TRSEFLPAIGYSSHRRFSVFSEFSKNIR 58

Query: 58  GEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVS 117
           GEA+SNPEF+ +VKE K++AEE KGVKE+LK RTKQTT+QLYKQVDGVW EAES  KKVS
Sbjct: 59  GEADSNPEFQRTVKEFKERAEEFKGVKEDLKVRTKQTTDQLYKQVDGVWTEAESAPKKVS 118

Query: 118 ASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQ-KQTVSSDTAETFY 176
           +S+K+K+SAATEEVK +F+ G  +++         G + S GE++Q +Q+ S++   TF+
Sbjct: 119 SSVKDKLSAATEEVKESFKLGKEESAESA---SSSGTRTSQGEKQQHQQSGSTEELHTFF 175

Query: 177 GKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGE 236
            K KSS+SSPK + AF KLKEAK  D+ KK  DIVKDEL G+PS++K LEYTP P +TGE
Sbjct: 176 AKFKSSLSSPKVSEAFYKLKEAKPFDIVKKALDIVKDELRGNPSRKKFLEYTPPPPFTGE 235

Query: 237 KSTRTDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           +S RT++VVTP+K+S W +     KEKMQG PVFKR++ +SEPVV K QE+  +
Sbjct: 236 RSMRTEMVVTPTKQSKWQQKWESFKEKMQGSPVFKRLSRMSEPVVNKSQEIAED 289

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827085|ref|XP_002881425.1| attim44-2 [Arabidopsis lyrata subsp. lyrata] gi|297327264|gb|EFH57684.1| attim44-2 [Arabidopsis lyrata subsp. lyrata]

 Score =  300 bits (767), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 165/292 (56%), Positives = 220/292 (75%), Gaps = 13/292 (4%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           MASRKLVRDL +++Q P F QL   +    RL L+S NG++S+R+FSVF EFSKKI+GEA
Sbjct: 1   MASRKLVRDLLITKQ-PLFQQLVHQRRVGARLGLLSGNGFASHRRFSVFSEFSKKIRGEA 59

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
           +SNPEF+ +VKE K++A E+K ++E+LK RTKQTTEQLYKQ  GVW EAES  KKVS+S+
Sbjct: 60  DSNPEFQKTVKEFKERAGELKDIREDLKARTKQTTEQLYKQGHGVWTEAESVAKKVSSSV 119

Query: 121 KEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLK 180
           K+K SAATEEVK +F+ G  + +   +     G   + G ++Q+Q+ +++  +TF+GK K
Sbjct: 120 KDKFSAATEEVKESFKLGKEENT---ESASSSGTGTTEGVKQQQQSGTTEEEDTFFGKFK 176

Query: 181 SSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTR 240
           SSISSPK + AF      K +D AKKG DIVK+EL G+PSKRKHLEYTP P +TGE+STR
Sbjct: 177 SSISSPKISEAFH-----KPLDFAKKGLDIVKEELRGNPSKRKHLEYTPPPPFTGERSTR 231

Query: 241 TDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSNRL 288
           T++V+TP+K+S W K    L+EKMQGYPVFKR++G+SEPVV K QE+  + +
Sbjct: 232 TEIVITPTKQSKWQKKWESLREKMQGYPVFKRLSGMSEPVVNKSQEIAEDVM 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399377|ref|NP_565473.1| translocase inner membrane subunit 44-1 [Arabidopsis thaliana] gi|20198086|gb|AAD25651.2| putative mitochondrial inner membrane translocating protein [Arabidopsis thaliana] gi|330251926|gb|AEC07020.1| translocase inner membrane subunit 44-1 [Arabidopsis thaliana]

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 154/290 (53%), Positives = 211/290 (72%), Gaps = 10/290 (3%)

Query: 1   MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
           MA RK++RDL +++Q P   QL   + ++ R   + A GY+S+R+FSVF EFSK I+GEA
Sbjct: 1   MAIRKIIRDLLITKQ-PLLRQLFHQRRANARSEFLPAIGYTSHRRFSVFTEFSKNIRGEA 59

Query: 61  ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
            SNPEF+ +VKELK++ EE KGV E+LK RTKQTTE+LYKQ DGVW EAES  KKVS+S+
Sbjct: 60  HSNPEFERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQADGVWTEAESAAKKVSSSV 119

Query: 121 KEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLK 180
           K+K+SAA+EEVK +F+ G  + +   +     G +AS GE  ++Q+ S++   TF+ K K
Sbjct: 120 KDKLSAASEEVKESFKLGKEENA---ESASSSGTRASQGE--KQQSGSTEELHTFFAKFK 174

Query: 181 SSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTR 240
           SS+SSPK +  F +LKEAK  D+ K+  DIVKDEL G+PS++K LE+TP P +TGE+S R
Sbjct: 175 SSLSSPKVSEVFYRLKEAKPFDIVKQALDIVKDELRGNPSRKKFLEHTPPPPFTGERSMR 234

Query: 241 TDLVVTPSKKS----MWSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
           T++VVT +K+S     W   +EKMQG PVFKR++G+SEPVV K QE+  +
Sbjct: 235 TEMVVTQTKQSKLQQKWESFREKMQGSPVFKRLSGMSEPVVNKSQEIAED 284

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2039195	469	TIM44-2 "AT2G36070" [Arabidops	0.893	0.590	0.575	2.8e-82
TAIR|locus:2054759	474	TIM44-1 "translocase inner mem	0.903	0.590	0.534	2.5e-74
UNIPROTKB|Q8IIG7	1070	PF11_0207 "Uncharacterized pro	0.819	0.237	0.236	5.3e-09
UNIPROTKB|Q9XJ56	258	ECPP44 "Phosphoprotein ECPP44"	0.583	0.701	0.245	0.00023
UNIPROTKB|F1PZZ3	1061	NEFH "Uncharacterized protein"	0.7	0.204	0.290	0.00034
UNIPROTKB|Q81YT0	1070	BAS0520 "Putative internalin"	0.464	0.134	0.285	0.00034
TIGR_CMR|BA_0552	1070	BA_0552 "internalin, putative"	0.464	0.134	0.285	0.00034
WB|WBGene00002263	1397	lea-1 [Caenorhabditis elegans	0.503	0.111	0.283	0.00036
GENEDB_PFALCIPARUM|PF11_0486	2055	PF11_0486 "MAEBL, putative" [P	0.558	0.084	0.270	0.00071
UNIPROTKB|Q8IHP3	2055	PF11_0486 "MAEBL, putative" [P	0.558	0.084	0.270	0.00071

TAIR|locus:2039195 TIM44-2 "AT2G36070" [Arabidopsis thaliana (taxid:3702)]

 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 167/290 (57%), Positives = 219/290 (75%)

Query:     1 MASRKLVRDLFLSRQRPRFLQLTPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKGEA 60
             MASRKLVRDL +++Q P   QL   +    RL L+  NG++S+R+FSVF EFSKKI+GEA
Sbjct:     1 MASRKLVRDLLITKQ-PLLQQLVHQRRVGARLGLLQGNGFASHRRFSVFSEFSKKIRGEA 59

Query:    61 ESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASM 120
             +SNPEF+ +VKE K++AEE++GVKE+LK RTKQTTE+LYKQ  GVW EAES  KKVS+S+
Sbjct:    60 DSNPEFQKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSV 119

Query:   121 KEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLK 180
             K+K SAATEEVK +F+ G  +++         G   + GE++Q+Q+ S++  +TF+GK K
Sbjct:   120 KDKFSAATEEVKESFKLGKEESAESASSS---GTGTTEGEKQQQQSGSTEEQDTFFGKFK 176

Query:   181 SSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTR 240
             SSISSPK + AF K      +D AKKG DIVKDEL G+PSKRKHLEYTP P +TGE+STR
Sbjct:   177 SSISSPKLSEAFHK-----PLDFAKKGLDIVKDELRGNPSKRKHLEYTPPPPFTGERSTR 231

Query:   241 TDLVVTPSKKSMWSK----LKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
             T++V+ P+K+S W K    L+EKMQGYPVFKR++G+SEPVV K QE+  +
Sbjct:   232 TEMVIMPTKQSKWQKKWESLREKMQGYPVFKRLSGMSEPVVNKSQEIAED 281

GO:0005622 "intracellular" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=TAS

GO:0006626 "protein targeting to mitochondrion" evidence=RCA;TAS

GO:0015462 "protein-transmembrane transporting ATPase activity" evidence=TAS

GO:0005743 "mitochondrial inner membrane" evidence=IDA

TAIR|locus:2054759 TIM44-1 "translocase inner membrane subunit 44-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 156/292 (53%), Positives = 210/292 (71%)

Query:     1 MASRKLVRDLFLSRQRPRFLQL--TPLQGSSTRLRLVSANGYSSNRQFSVFKEFSKKIKG 58
             MA RK++RDL +++Q P   QL    +  ++ R   + A GY+S+R+FSVF EFSK I+G
Sbjct:     1 MAIRKIIRDLLITKQ-PLLRQLFHQRVLRANARSEFLPAIGYTSHRRFSVFTEFSKNIRG 59

Query:    59 EAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSA 118
             EA SNPEF+ +VKELK++ EE KGV E+LK RTKQTTE+LYKQ DGVW EAES  KKVS+
Sbjct:    60 EAHSNPEFERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQADGVWTEAESAAKKVSS 119

Query:   119 SMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGK 178
             S+K+K+SAA+EEVK +F+ G  + +         G +AS GE KQ Q+ S++   TF+ K
Sbjct:   120 SVKDKLSAASEEVKESFKLGKEENAESASSS---GTRASQGE-KQ-QSGSTEELHTFFAK 174

Query:   179 LKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKS 238
              KSS+SSPK +  F +LKEAK  D+ K+  DIVKDEL G+PS++K LE+TP P +TGE+S
Sbjct:   175 FKSSLSSPKVSEVFYRLKEAKPFDIVKQALDIVKDELRGNPSRKKFLEHTPPPPFTGERS 234

Query:   239 TRTDLVVTPSKKSM----WSKLKEKMQGYPVFKRITGISEPVVTKGQEVCSN 286
              RT++VVT +K+S     W   +EKMQG PVFKR++G+SEPVV K QE+  +
Sbjct:   235 MRTEMVVTQTKQSKLQQKWESFREKMQGSPVFKRLSGMSEPVVNKSQEIAED 286

GO:0005739 "mitochondrion" evidence=ISM

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA;TAS

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=TAS

GO:0015462 "protein-transmembrane transporting ATPase activity" evidence=TAS

UNIPROTKB|Q8IIG7 PF11_0207 "Uncharacterized protein PF11_0207" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 165 (63.1 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 64/271 (23%), Positives = 128/271 (47%)

Query:     3 SRKLVRDLFLSR-QRPRFLQLTPLQGSSTRLRLVSANGYSS--NRQFSVFKEFSKKIKGE 59
             + K  + L+L R +  R  +    Q + T +++           R+  + +EF +++K E
Sbjct:   444 TNKSEKPLYLRRLEEYRKKKKLESQANDTAMKMHEKEQIDDIQERKEEIKEEFKEEVKEE 503

Query:    60 A-ESNPEFKHSVKELKKKA-EEIKGVKEELKERTKQTTEQLYKQVDGVW---MEAESTVK 114
               E   E K   +E+K++  EEIK VKEE+KE  K+  +++ +++  V     E +  +K
Sbjct:   504 IKEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEVKEEIKEVKEEIK 563

Query:   115 KVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQ-KQTVSSDTAE 173
             +V   +KE+I    EE+K   +    +   +  ++V++  K    E K+ K+ +  +  E
Sbjct:   564 EVKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEVKEEIKEVKEEIKEVKEEIKEEVKE 623

Query:   174 TFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKH---LEYTPS 230
                 ++K  I   K  +  +++KE K  ++ ++  + +K+E+     + K+    E T  
Sbjct:   624 EIK-EVKEEIKEVKEEIK-EEIKEVKE-EIKEEVKEEIKEEIKEIKEELKNDISSETTKE 680

Query:   231 PSWTGEKSTRTDLV-VTPSKKSMWSK-LKEK 259
                T  K   T+     P +  M+ + LKEK
Sbjct:   681 EKNTEHKKEETEKKKFIPKRVIMYQQELKEK 711

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=NAS

GO:0016020 "membrane" evidence=NAS

UNIPROTKB|Q9XJ56 ECPP44 "Phosphoprotein ECPP44" [Daucus carota (taxid:4039)]

 Score = 115 (45.5 bits), Expect = 0.00023, P = 0.00023
 Identities = 50/204 (24%), Positives = 94/204 (46%)

Query:    67 KHSVKELKKKAEEIKGV----KEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKE 122
             +HSV++  +     +G+    K+E K+ TK    +  ++V     E +    KV    +E
Sbjct:     9 QHSVEKTTEYESSDRGLFDFMKKEEKDETKVIATEFEEKVQVSEPEPKYEDCKVVEEEEE 68

Query:   123 KISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSS 182
             K +A    ++   R+GS+ +S+  D++V +G      ++K+K+ +     E  + K +  
Sbjct:    69 K-AAKPSLLEKLHRSGSSSSSSSSDEEVEEG--GEKKKKKEKKGLKEKIEEKIHHK-EED 124

Query:   183 ISSPKFTLAFQKLKEAKVVDLAKKGY-DIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRT 241
              S P      + + E +     KKG+ + +K++L G   K +     P P      +   
Sbjct:   125 TSVP-----VEVVTEPE----KKKGFMEKIKEKLPGGGKKVEEETVAPPPP---PAAAPV 172

Query:   242 DLVVT--PSKKSMWSKLKEKMQGY 263
             D  V   P+KK +  K+KEK+ GY
Sbjct:   173 DCAVEGDPAKKGILEKIKEKIPGY 196

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1PZZ3 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 72/248 (29%), Positives = 106/248 (42%)

Query:    35 VSANGYSSNRQFSVFKEFSKK-IKGEAESNPEFKHSVKELKKKAEEIKG-------VKEE 86
             V     S  +  S  KE +K  +K EA+S  + K  VKE  K  E+ K        VKEE
Sbjct:   620 VKEEAKSPEKAKSPVKEEAKSPVKEEAKSPEKTKSPVKEEAKSPEKAKSPEKAKSPVKEE 679

Query:    87 LK--ERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKI-SAATEEVKGTFRTGS-TDT 142
              K  E+ K   ++  K  +    +A+S VK+ + S ++K  S   EE K   +  S    
Sbjct:   680 AKSPEKAKSPVKEEAKSPE----KAKSPVKEEAKSPEKKAKSPVKEEAKSPEKAKSPVKE 735

Query:   143 SAKHDDDVRDGFKASS-GEEKQKQTVSSD--TAETFYGKLKSSISSPKFTLAFQKLK--- 196
              AK  +  +   K  +   EK K  V  +  + E     +K    SP+   + +K K   
Sbjct:   736 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPEKAKSPV 795

Query:   197 --EAKVVDLAK---KGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKS 251
               EAK  + AK   K    VK+E   SP K K  E   SP    E++   +  VT  K+ 
Sbjct:   796 KEEAKSPEKAKSPEKAKSPVKEEAK-SPEKAKSPEKVKSP--VKEETKAPEKEVT-KKEE 851

Query:   252 MWSKLKEK 259
               S +KE+
Sbjct:   852 AKSPIKEE 859

GO:0005882 "intermediate filament" evidence=IEA

UNIPROTKB|Q81YT0 BAS0520 "Putative internalin" [Bacillus anthracis (taxid:1392)]

 Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 46/161 (28%), Positives = 81/161 (50%)

Query:    50 KEFSKKIKGEAES--NP--EFKHSVKELKKKAEEIKGVKEELKERTKQTT---EQLY--- 99
             KE +K+++G  E    P  E + S +E+K+ A+E++G KEE+KE TK+     E++    
Sbjct:   868 KEPAKEVEGSKEEPKEPAKEVEGSKEEVKEPAKEVEGPKEEVKEPTKEVEGPKEEVKEPT 927

Query:   100 KQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFR-TGSTDTSAKHDDDVRDGFKASS 158
             K+V+G   E +  +K+V  S KE++   T+E +G+        T  +   +V++  K   
Sbjct:   928 KEVEGPKEEVKEPMKEVEGS-KEEVKGPTKEAEGSKEEVKEPTTEVEGSKEVKEPGKEVE 986

Query:   159 GEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAK 199
             G  K     S+   ET    + + +   K  +  Q +KE K
Sbjct:   987 GS-KDAINQSAVAQET---NVNNQVGKEK-VVENQNMKENK 1022

GO:0003674 "molecular_function" evidence=ND

TIGR_CMR|BA_0552 BA_0552 "internalin, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 46/161 (28%), Positives = 81/161 (50%)

Query:    50 KEFSKKIKGEAES--NP--EFKHSVKELKKKAEEIKGVKEELKERTKQTT---EQLY--- 99
             KE +K+++G  E    P  E + S +E+K+ A+E++G KEE+KE TK+     E++    
Sbjct:   868 KEPAKEVEGSKEEPKEPAKEVEGSKEEVKEPAKEVEGPKEEVKEPTKEVEGPKEEVKEPT 927

Query:   100 KQVDGVWMEAESTVKKVSASMKEKISAATEEVKGTFR-TGSTDTSAKHDDDVRDGFKASS 158
             K+V+G   E +  +K+V  S KE++   T+E +G+        T  +   +V++  K   
Sbjct:   928 KEVEGPKEEVKEPMKEVEGS-KEEVKGPTKEAEGSKEEVKEPTTEVEGSKEVKEPGKEVE 986

Query:   159 GEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAK 199
             G  K     S+   ET    + + +   K  +  Q +KE K
Sbjct:   987 GS-KDAINQSAVAQET---NVNNQVGKEK-VVENQNMKENK 1022

GO:0003674 "molecular_function" evidence=ND

GO:0009405 "pathogenesis" evidence=ISS

WB|WBGene00002263 lea-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
 Identities = 49/173 (28%), Positives = 78/173 (45%)

Query:    53 SKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAEST 112
             +K   GEA  +   K    E K KA +     ++ + ++K  TE++   + G W   EST
Sbjct:   467 AKDKMGEAWDHT--KDKAGEAKDKASD---AADDAQGKSKSMTEKIGDSISGAW---EST 518

Query:   113 VKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTA 172
              K  + S K+K + A  +V G   +G+ DT  +   D+ D FKA S + K    V +  A
Sbjct:   519 -KDTAVSAKDKTAEAAGKV-GDSISGAYDTVKEKASDIADSFKAHSTDSKDN--VENKAA 574

Query:   173 ETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGS-PSKRKH 224
             +  Y   K   +S  +     K  +AK  D A   +D  KD+   +  S + H
Sbjct:   575 DA-YNSAKDK-ASDAWDKTKDKAGDAK--DKAADAWDTTKDKAGDAWDSTKDH 623

GO:0006950 "response to stress" evidence=TAS

GENEDB_PFALCIPARUM|PF11_0486 PF11_0486 "MAEBL, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
 Identities = 49/181 (27%), Positives = 77/181 (42%)

Query:    50 KEFSKKIKGEA-ESNPEFKHSVKELKKKAEEIKGVKEELK---ERTKQTTEQLYKQVDGV 105
             KE  +KIK E  +   E K  V++LKKK EE K   E+LK   E  K   EQL K+ +  
Sbjct:  1593 KEEEEKIKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEE 1652

Query:   106 WMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQK- 164
               +AE  +KK     K+K     +E +   +        + +    +  K    E K K 
Sbjct:  1653 KKKAEE-LKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKV 1711

Query:   165 -QTVSSDTAETFYGK-LKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKR 222
              Q    +  E    + LK      K     +K +E K  ++ K+   ++++EL     KR
Sbjct:  1712 EQLKKEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKKAEEIRKEKEAVIEEELKKEDEKR 1771

Query:   223 K 223
             +
Sbjct:  1772 R 1772

GO:0016020 "membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0020007 "apical complex" evidence=TAS

UNIPROTKB|Q8IHP3 PF11_0486 "MAEBL, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 122 (48.0 bits), Expect = 0.00071, P = 0.00071
 Identities = 49/181 (27%), Positives = 77/181 (42%)

Query:    50 KEFSKKIKGEA-ESNPEFKHSVKELKKKAEEIKGVKEELK---ERTKQTTEQLYKQVDGV 105
             KE  +KIK E  +   E K  V++LKKK EE K   E+LK   E  K   EQL K+ +  
Sbjct:  1593 KEEEEKIKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEE 1652

Query:   106 WMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQK- 164
               +AE  +KK     K+K     +E +   +        + +    +  K    E K K 
Sbjct:  1653 KKKAEE-LKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKV 1711

Query:   165 -QTVSSDTAETFYGK-LKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKR 222
              Q    +  E    + LK      K     +K +E K  ++ K+   ++++EL     KR
Sbjct:  1712 EQLKKEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKKAEEIRKEKEAVIEEELKKEDEKR 1771

Query:   223 K 223
             +
Sbjct:  1772 R 1772

GO:0008150 "biological_process" evidence=ND

GO:0020007 "apical complex" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_II0183 hypothetical protein (484 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.001

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 40.5 bits (94), Expect = 0.001
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 11/180 (6%)

Query: 50   KEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELK--ERTKQTTEQLYKQVDGVWM 107
            KE +KK    A+   E K    E KKKAEE K   +ELK     K+  ++  K+ +    
Sbjct: 1373 KEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKK 1432

Query: 108  EAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTV 167
              E+  K   A   ++     EE K           AK  D+ +        EE +K   
Sbjct: 1433 ADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAK-----KKAEEAKKADE 1487

Query: 168  SSDTAETFYGK---LKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVK-DELSGSPSKRK 223
            +   AE    K    K +  + K     +K +EAK  D AKK  +  K DE   +  K+K
Sbjct: 1488 AKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547

Length = 2084

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
KOG2580	459	consensus Mitochondrial import inner membrane tran	100.0
TIGR00984	378	3a0801s03tim44 mitochondrial import inner membrane	100.0
KOG2580	459	consensus Mitochondrial import inner membrane tran	96.69
PF07464	155	ApoLp-III: Apolipophorin-III precursor (apoLp-III)	93.28

>KOG2580 consensus Mitochondrial import inner membrane translocase, subunit TIM44 [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-48  Score=381.26  Aligned_cols=247  Identities=23%  Similarity=0.337  Sum_probs=208.0

Q ss_pred             cCcccccccccccCCCC-CCCcchHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHhhhhHHHHhhhhHHHHHHHHhhhhh
Q 021622           26 QGSSTRLRLVSANGYSS-NRQFSVFKEFSKKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDG  104 (310)
Q Consensus        26 ~~~~~~~~~~~~r~ys~-~rr~gffsef~dnIK~E~~KNkEmKesiKkFrEeAekLe~skEaLK~rtkqtArqkyk~Vd~  104 (310)
                      +++..++.+.+.++||+ +||+|||++|+||||+||+||||||+|||+|+++|++|++| |+||     .||++|+++  
T Consensus        41 ~~~~ar~~~~q~~~yss~~~r~s~ls~f~dn~r~E~~knkElqe~iK~lkd~a~~L~es-da~k-----kaR~k~~~~--  112 (459)
T KOG2580|consen   41 TRLGARLPFSQTRGYSSPGRRRSFLSEFSDNVRAELDKNKELQESIKKLKDRAGELEES-DALK-----KARTKYETA--  112 (459)
T ss_pred             hcccccccccccccccCCCCCCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhhccc-hHHH-----HHHHHHHHH--
Confidence            46889999999999995 89999999999999999999999999999999999999997 9995     999999999  


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHhhhhccccccccCCcCCCCcccccCccCchhhhhhhcccccchhhhhcccccccC
Q 021622          105 VWMEAESTVKKVSASMKEKISAATEEVKGTFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSSIS  184 (310)
Q Consensus       105 ~~~EaEsea~KvS~~vKeKlsa~te~VkEs~~~gKee~S~s~~~~~k~~~k~~~~Ee~~~a~~s~~~aet~~~k~kst~s  184 (310)
                           |+++.++|..+|+++++++|+|+.+.    +|+++|+ ++ + +.++..+|.+++|+++++.-+++|++|++|.+
T Consensus       113 -----e~~t~~~s~~~kk~~~e~~e~~k~~~----~ea~eS~-~~-k-~t~~~~~e~~kqA~~sae~vd~~~~kv~~T~~  180 (459)
T KOG2580|consen  113 -----ESETQASSEVLKKKLGELKETVKLGA----EEAWESA-LG-K-KTKEAVEEAQKQASGSAEEVDTFFEKVGQTAA  180 (459)
T ss_pred             -----HhhhhhhhHHHHHHHHHHHHHHHHHH----HHHHhhh-hh-c-cchhhHHHHHHHhhcchhhhhHhhhhhhhhhh
Confidence                 99999999999999999988888877    9999998 43 2 55555577778999998877777777777777


Q ss_pred             ChhhhHHHHHHHHhHHHHHHhhhhhhhhhcccCCCCcccccccCCCCCCCCCCccceeeeEeeecCchhHH-HHhhhcCC
Q 021622          185 SPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSPSKRKHLEYTPSPSWTGEKSTRTDLVVTPSKKSMWSK-LKEKMQGY  263 (310)
Q Consensus       185 s~~~S~afqkL~~t~~~~~isqg~e~VK~El~~~~~lRKR~e~~~~~~~~~~~strt~i~vvlhKdSkWyq-wK~fk~nn  263 (310)
                      .+.+|.+|..++  +-++.++.|..+||+++..+++.+++.+.++++++.++.++++ .+||+|+||+||+ |+||+++|
T Consensus       181 yk~vSe~~~~vk--k~~d~s~~g~~i~k~~~r~lr~r~~~~~~~~~~~~~~E~n~~a-~~vv~h~~skw~~kwe~fkek~  257 (459)
T KOG2580|consen  181 YKAVSEVMETVK--KEIDSSRYGLDIVKERPRKLRKRTEFLGDTFPSEKVGEPNEEA-EGVVLHKDSKWYQKWEDFKEKN  257 (459)
T ss_pred             HHHHHHHHHhhc--ccchhhhhhhhchhhhhhhchhhhhhhccCCCcccccCCCcce-eeEEeccchHHHHHHHHHHhcc
Confidence            777777777666  5666677777777777765444444555666777766655544 2349999999999 99999999


Q ss_pred             cceecc-------ccCcchhhhhchhhhhhhheeccccc
Q 021622          264 PVFKRI-------TGISEPVVTKGQEVCSNRLLLTSSCF  295 (310)
Q Consensus       264 p~fnR~-------desdnpVVrasr~vtDk~~~~~~~~~  295 (310)
                      .||++|       |||+||+|+++|.|||+|--+-+..|
T Consensus       258 ~~~~k~~~lk~~ydeseN~~i~~~rdvtdki~~~~~g~f  296 (459)
T KOG2580|consen  258 VVVRKFQELKKKYDESENPSIRASRDVTDKITDVDGGLF  296 (459)
T ss_pred             cchHHHHHHHhhccccccHHHHHHHHHHHhhhhcccccc
Confidence            999999       99999999999999999987777655

>TIGR00984 3a0801s03tim44 mitochondrial import inner membrane, translocase subunit

Probab=100.00  E-value=1.6e-37  Score=300.66  Aligned_cols=202  Identities=14%  Similarity=0.179  Sum_probs=170.1

Q ss_pred             HHHHHHhhhChhhHHHHHHHHHHHHHhhhhHHHHhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 021622           54 KKIKGEAESNPEFKHSVKELKKKAEEIKGVKEELKERTKQTTEQLYKQVDGVWMEAESTVKKVSASMKEKISAATEEVKG  133 (310)
Q Consensus        54 dnIK~E~~KNkEmKesiKkFrEeAekLe~skEaLK~rtkqtArqkyk~Vd~~~~EaEsea~KvS~~vKeKlsa~te~VkE  133 (310)
                      ||||+|+.||+|||+|||+|+++|.+|++| |+||     .||++|+.+       |++|.++|+++++.|..+.+.|++
T Consensus         1 d~~k~E~~kskE~~enik~l~~~~~~~~es-ea~k-----~ar~~y~~~-------~~~~~~~s~~~~~~l~~~~~~v~~   67 (378)
T TIGR00984         1 DTFRDELQKSQELQESIKQLQDRSGKLNES-DALK-----KARKAYEKA-------ESGTLKSSEVVGKTLGKLGDTMKK   67 (378)
T ss_pred             CchHHHHHhhHHHHHHHHHHHHHHhhhhhh-HHHH-----HHHHHHHHH-------hcccchhhHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999996 9995     999999999       999999999999999999999999


Q ss_pred             ccccccccCCcCCCCcccccCccCchhhhhhhcccccchhhhhcccccccCChhhhHHHHHHHHhHHHHHHhhhhhhhhh
Q 021622          134 TFRTGSTDTSAKHDDDVRDGFKASSGEEKQKQTVSSDTAETFYGKLKSSISSPKFTLAFQKLKEAKVVDLAKKGYDIVKD  213 (310)
Q Consensus       134 s~~~gKee~S~s~~~~~k~~~k~~~~Ee~~~a~~s~~~aet~~~k~kst~ss~~~S~afqkL~~t~~~~~isqg~e~VK~  213 (310)
                      .+    .++.+|+ .+    ++ .......+|+++++                .++.+|+.||+|++|+.+|++++.+|+
T Consensus        68 ~~----~~~~~s~-~~----k~-~~~~~~~ta~~~~~----------------~~~~~~~~v~~T~~yk~vs~~~~~~k~  121 (378)
T TIGR00984        68 MA----HKAWESE-LG----KK-MKKAGAETAKTAAE----------------HVDKSAEPVRDTAVYKHVSQSMKDGKD  121 (378)
T ss_pred             HH----HHHhhcH-HH----HH-HHHHHHHHhhhhhh----------------hHHHhcccccccHHHHHHHHHHHhhhc
Confidence            99    6676665 33    21 22344446666633                899999999999999999999999999


Q ss_pred             cccCCC-----------CcccccccCCCC--CCCCCCccceeeeEeeecCchhHH-HHhhhcCCcceecc-------ccC
Q 021622          214 ELSGSP-----------SKRKHLEYTPSP--SWTGEKSTRTDLVVTPSKKSMWSK-LKEKMQGYPVFKRI-------TGI  272 (310)
Q Consensus       214 El~~~~-----------~lRKR~e~~~~~--~~~~~~strt~i~vvlhKdSkWyq-wK~fk~nnp~fnR~-------des  272 (310)
                      |++..+           .||+|++..+.+  ....+|++.|++  +|||||+||+ |++|++|||||+||       ++|
T Consensus       122 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~n~~a~~v--~~~k~s~~~~~w~~fk~~~~~~~~~~~lk~~~~eS  199 (378)
T TIGR00984       122 SSRYGFIADKEQRRRPRELTKRTDGRDFAKSRVVEANESVTDV--VLHSDSSWYSKVEDFKESNVVYRKIQELKKKYDES  199 (378)
T ss_pred             ccccccccchhhhhhHHHhhhhhcccccccccccccCCcccce--EEecccHHHHHHHHHHhhCHHHHHHHHHHHHhhcc
Confidence            999843           256665544221  114455555555  9999999999 99999999999999       899


Q ss_pred             cchhhhhchhhhhhhheeccccce
Q 021622          273 SEPVVTKGQEVCSNRLLLTSSCFI  296 (310)
Q Consensus       273 dnpVVrasr~vtDk~~~~~~~~~~  296 (310)
                      |||+|+..|.|||+|--+-++.|-
T Consensus       200 eNp~i~~~r~itdkv~~~~~~lF~  223 (378)
T TIGR00984       200 ENPLVRMMRGVTDKIGGVFSGMFS  223 (378)
T ss_pred             cChhhhHhHHhhhhhhhhhhcccC
Confidence            999999999999999887777776

translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tim proteins.

>KOG2580 consensus Mitochondrial import inner membrane translocase, subunit TIM44 [Intracellular trafficking, secretion, and vesicular transport]

Probab=96.69  E-value=0.0024  Score=64.62  Aligned_cols=45  Identities=20%  Similarity=0.282  Sum_probs=39.2

Q ss_pred             ChhhhHHHHHHHHhHHHHHHhhhhhhhhhcccCCC-----------CcccccccCC
Q 021622          185 SPKFTLAFQKLKEAKVVDLAKKGYDIVKDELSGSP-----------SKRKHLEYTP  229 (310)
Q Consensus       185 s~~~S~afqkL~~t~~~~~isqg~e~VK~El~~~~-----------~lRKR~e~~~  229 (310)
                      ...++.+|.++|+|.+|..+|++++.||+|+|+..           .||+|.++..
T Consensus       165 ae~vd~~~~kv~~T~~yk~vSe~~~~vkk~~d~s~~g~~i~k~~~r~lr~r~~~~~  220 (459)
T KOG2580|consen  165 AEEVDTFFEKVGQTAAYKAVSEVMETVKKEIDSSRYGLDIVKERPRKLRKRTEFLG  220 (459)
T ss_pred             hhhhhHhhhhhhhhhhHHHHHHHHHhhcccchhhhhhhhchhhhhhhchhhhhhhc
Confidence            34699999999999999999999999999999864           3888888733

>PF07464 ApoLp-III: Apolipophorin-III precursor (apoLp-III); InterPro: IPR010009 This family consists of several insect apolipoprotein-III sequences

Probab=93.28  E-value=0.097  Score=46.42  Aligned_cols=68  Identities=26%  Similarity=0.445  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHhhh-ChhhHHHHHHHHHHHHHhhhhHHHHhhh-------hHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 021622           49 FKEFSKKIKGEAES-NPEFKHSVKELKKKAEEIKGVKEELKER-------TKQTTEQLYKQVDGVWMEAESTVKKVSAS  119 (310)
Q Consensus        49 fsef~dnIK~E~~K-NkEmKesiKkFrEeAekLe~skEaLK~r-------tkqtArqkyk~Vd~~~~EaEsea~KvS~~  119 (310)
                      ++.++.+|.+|+.. ||++.+.++.|+.+   |++..+.|+..       ..+-.+++-..|+..-+|++..+..++.+
T Consensus        43 l~~~~~~l~eeik~~n~~~~e~l~~~~~k---l~et~~~L~k~~Pev~~qa~~l~e~lQ~~vq~l~~E~qk~~k~v~~~  118 (155)
T PF07464_consen   43 LQNVSSSLQEEIKDANPEAEEALKQLKTK---LEETAEKLRKANPEVEKQANELQEKLQSAVQSLVQESQKLAKEVSEN  118 (155)
T ss_dssp             HHHHHHHHHHHHTT-SSTHHHHHHHHHHH---HHHHHHGGGG-SHHHHHT-SSSHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHHHHH---HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999 99999999999988   66666666511       11222334444444455555444443333

Exchangeable apolipoproteins constitute a functionally important family of proteins that play critical roles in lipid transport and lipoprotein metabolism. Apolipophorin III (apoLp-III) is a prototypical exchangeable apolipoprotein found in many insect species that functions in transport of diacylglycerol (DAG) from the fat body lipid storage depot to flight muscles in the adult life stage [].; GO: 0008289 lipid binding, 0006869 lipid transport, 0005576 extracellular region; PDB: 1EQ1_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
3qk9_A	222	Mitochondrial import inner membrane translocase S	98.58

>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A

Probab=98.58  E-value=6e-09  Score=94.13  Aligned_cols=37  Identities=11%  Similarity=0.135  Sum_probs=15.7

Q ss_pred             hhHH-HHhhhcCCcceecc--------ccCcchhhhhchhhhhhhh
Q 021622          252 MWSK-LKEKMQGYPVFKRI--------TGISEPVVTKGQEVCSNRL  288 (310)
Q Consensus       252 kWyq-wK~fk~nnp~fnR~--------desdnpVVrasr~vtDk~~  288 (310)
                      +||+ |++|++||||||||        +|||||+|++.|.|||+|-
T Consensus         8 ~~~~~w~~fk~~~~~~~~~~~~k~~~~~es~np~i~~~r~itd~v~   53 (222)
T 3qk9_A            8 SFGKKVEDFKEKTVVGRSIQSLKNKLWDESENPLIVVMRKITNKVG   53 (222)
T ss_dssp             -------------------CHHHHHHHHHCCCHHHHHHHHHCC---
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHhhhcccccCHHHHHHHHHHHhcc
Confidence            8999 99999999999999        8999999999999999983

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00