Citrus Sinensis ID: 021625

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Secondary Structure (PSIPRED)
ccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccEcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccEEEccccccccccccHHHcHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mvlvneqrklsaslpLICRCIISCILVLLTQLTlslvprffaasPFIVQFALSGLVLLLVQTLCGWCRRLlgvcasapafvFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSimskdpglitnefphldklvegselgvdpdnenslsrKRVRYCKICKAhvegfdhhcpafgncigqnnYFLFIVLLVGFLATEASYVACSAqfvgksqnfdksqsenDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNvrtdewvnwkkypefqviesepgkyfLQHAVVSKCKLFTLWLNLKHF
Flexible Loop (DISEMBL)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVegselgvdpdnenslsrkRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Low Complexity Region (SEG)
MVLVNEQRKLSASLPLICRCIISCIlvlltqltlslvPRFFAASPFIVQFALSGlvlllvQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Disordered region (IsUnstruct)
***********ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE****************KRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNF*****ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNL***
Disordered Region (DISOPRED)
***************LICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD**VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPE**********YFLQHAVVSKCKLFTLWLNLKHF
Disordered Region (DISEMBL)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Disordered Region (DISPRO)
*******RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKCKLFTLWLNLKHF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
Q9NYG2	327	Palmitoyltransferase ZDHH	no	no	0.348	0.330	0.307	6e-08
Q80TN5	632	Palmitoyltransferase ZDHH	yes	no	0.506	0.248	0.283	7e-08
Q8R173	299	Palmitoyltransferase ZDHH	no	no	0.348	0.361	0.299	1e-07
Q8IUH5	632	Palmitoyltransferase ZDHH	no	no	0.506	0.248	0.277	1e-07
Q9UVH3	559	Palmitoyltransferase AKR1	N/A	no	0.374	0.207	0.283	6e-07
Q9NUE0	388	Palmitoyltransferase ZDHH	no	no	0.338	0.270	0.330	9e-07
Q3EC11	536	Probable S-acyltransferas	yes	no	0.441	0.255	0.233	2e-06
Q550R7	434	Putative ZDHHC-type palmi	yes	no	0.135	0.096	0.545	2e-06
Q5Y5T2	380	Palmitoyltransferase ZDHH	no	no	0.338	0.276	0.321	2e-06
Q2TGJ1	386	Palmitoyltransferase ZDHH	no	no	0.338	0.272	0.321	3e-06

>sp|Q9NYG2|ZDHC3_HUMAN Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R  V S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q80TN5|ZDH17_MOUSE Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zdhhc17 PE=1 SV=2

 Score = 58.2 bits (139), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 16/173 (9%)

Query: 126 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 179
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 180 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS 237
             GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 527

Query: 238 T------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIES 283
           +       L S+   LW AV  M  +Y + C  + T+E +N ++Y  F+V  +
Sbjct: 528 SPWMFWMFLNSVFHFLWVAVLLMCQLYQITCLGITTNERMNARRYKHFKVTTT 580

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8R173|ZDHC3_MOUSE Palmitoyltransferase ZDHHC3 OS=Mus musculus GN=Zdhhc3 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 97  RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDP 150
           R    S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P
Sbjct: 71  RDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCP 130

Query: 151 DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 205
               S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 131 KC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8IUH5|ZDH17_HUMAN Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZDHHC17 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 16/173 (9%)

Query: 126 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 179
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 180 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS 237
             GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 527

Query: 238 T------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIES 283
           +       L S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V  +
Sbjct: 528 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKVTTT 580

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UVH3|AKR1_MORAP Palmitoyltransferase AKR1 (Fragment) OS=Mortierella alpina PE=3 SV=1

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGK-S 218
           R ++CK C   V  FDHHCP   NCIG  N+  F++ L  FL++   Y   S +++   S
Sbjct: 284 RSKHCKFCNRCVAKFDHHCPWIYNCIGAKNHRAFLIFLALFLSSVPIYAYLSFEYLHVLS 343

Query: 219 QNFDKSQSE---------NDWVVNLATSTMLF-SILQLLWQAVFFMWHIYCVCFNVRTDE 268
            ++    S+           +  +  T+T+ F S+ Q+ W  + F+  +Y V     T+E
Sbjct: 344 PSYVPVSSDPCLLGDTLCGYFQYDAFTTTLAFWSLFQMTWPGLLFLVQLYQVGQAKTTNE 403

Query: 269 WVNWKKY 275
            +N++++
Sbjct: 404 AMNFQRH 410

Palmitoyltransferase specific for casein kinase 1.

Mortierella alpina (taxid: 64518)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NUE0|ZDH18_HUMAN Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZDHHC18 PE=2 SV=2

 Score = 54.7 bits (130), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFV---G 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC    +    
Sbjct: 204 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRA 263

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  E    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 264 QGSNFLSTLKETPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 311

Has palmitoyltransferase activity towards HRAS and LCK.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q3EC11|ZDHC2_ARATH Probable S-acyltransferase At2g14255 OS=Arabidopsis thaliana GN=At2g14255 PE=2 SV=2

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 13/150 (8%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQ 219
           R ++C  CK  VE FDHHCP   NC+G+ N   F+V ++  +    S+V  +       +
Sbjct: 375 RSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYFLVFVI--MGALTSFVGGTTAVQRLWR 432

Query: 220 NFDKSQSENDWVVNL------ATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK 273
              +      W+ ++      A   + F +L  +      +   Y +  N+ T+E  N K
Sbjct: 433 GIPQVHHGESWIKHIVIEHPDAAVFLFFDLLIFIATMTLTISQSYMIARNITTNELWNAK 492

Query: 274 KYPEFQVIESEPGKYF--LQHAVVSKCKLF 301
           +   F  +    G+++    H +   C  F
Sbjct: 493 R---FSYLRGPDGRFYNPYNHGLRRNCTDF 519

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q550R7|ZDHC1_DICDI Putative ZDHHC-type palmitoyltransferase 1 OS=Dictyostelium discoideum GN=DDB_G0276997 PE=3 SV=3

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY--FLFIVLLVGFL 201
           R  +C IC   VE FDHHCP  GNCIG+ NY  FL+ +  +GFL
Sbjct: 127 RANHCGICNNCVERFDHHCPWVGNCIGRRNYQTFLYFLYSLGFL 170

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T2|ZDH18_MOUSE Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zdhhc18 PE=1 SV=4

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 196 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 255

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  +  +    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 256 QGSNFLSALKKTPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 303

Has palmitoyltransferase activity towards HRAS and LCK.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2TGJ1|ZDH18_RAT Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus GN=Zdhhc18 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 216
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 202 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 261

Query: 217 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 268
           +  NF  + ++    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 262 QGSNFLSALNKTPAGV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 309

Has palmitoyltransferase activity towards HRAS and LCK.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
297746095	311	unnamed protein product [Vitis vinifera]	0.922	0.919	0.567	1e-85
255585828	291	zinc finger protein, putative [Ricinus c	0.796	0.848	0.540	5e-78
218192534	328	hypothetical protein OsI_10951 [Oryza sa	0.845	0.798	0.484	1e-69
222624656	370	hypothetical protein OsJ_10323 [Oryza sa	0.845	0.708	0.480	9e-69
225434978	311	PREDICTED: probable S-acyltransferase At	0.854	0.852	0.490	2e-68
357112878	313	PREDICTED: palmitoyltransferase ZDHHC17-	0.861	0.853	0.474	3e-68
226495287	315	DHHC zinc finger domain containing prote	0.887	0.873	0.443	3e-65
195619870	315	DHHC zinc finger domain containing prote	0.887	0.873	0.44	7e-65
115452213	299	Os03g0275400 [Oryza sativa Japonica Grou	0.8	0.829	0.471	9e-62
414866097	300	TPA: hypothetical protein ZEAMMB73_41357	0.838	0.866	0.443	1e-61

>gi|297746095|emb|CBI16151.3| unnamed protein product [Vitis vinifera]

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 163/287 (56%), Positives = 206/287 (71%), Gaps = 1/287 (0%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA 180
           SI+S DPG +T+     D   E S    +   E S S +RVRYCK CKA+V+GFDHHCPA
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEGSFSSRRVRYCKSCKAYVKGFDHHCPA 180

Query: 181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 240
           FGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D++  E     NL  STML
Sbjct: 181 FGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDETGQETSLSENLVISTML 240

Query: 241 FSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPG 286
           F +LQ+LWQ VF  WHIYCVC N+RTDEW+NWKKYPEFQ +I  +PG
Sbjct: 241 FCLLQVLWQGVFLTWHIYCVCVNIRTDEWINWKKYPEFQIIIPIQPG 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585828|ref|XP_002533592.1| zinc finger protein, putative [Ricinus communis] gi|223526536|gb|EEF28797.1| zinc finger protein, putative [Ricinus communis]

 Score =  296 bits (759), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 153/283 (54%), Positives = 190/283 (67%), Gaps = 36/283 (12%)

Query: 4   VNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTL 63
           + ++R+  A LP   RC +S ILVLLTQ +LSL+PRFF+AS F++Q  LSG+V+L V   
Sbjct: 1   MQQERRKEALLPKFGRCTVSSILVLLTQFSLSLIPRFFSASSFLLQLTLSGIVVLFVLGF 60

Query: 64  CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIM 123
             WCRRLLGV ASAPAFVF N+LFIW  Y  VVR AV   +  +F+ EV M+ IG     
Sbjct: 61  GRWCRRLLGVHASAPAFVFLNLLFIWSVYFCVVRPAVPFFMDAIFSGEVVMLFIG----- 115

Query: 124 SKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGN 183
             DP L+                            KRVRYCK CKA+V+GFDHHCPAFGN
Sbjct: 116 --DPLLL----------------------------KRVRYCKSCKAYVKGFDHHCPAFGN 145

Query: 184 CIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSI 243
           CIGQ+N+ LF+VLL+GFL+TEASY+ CS QFV  SQ    ++ E      L T TMLF++
Sbjct: 146 CIGQSNHALFMVLLLGFLSTEASYIMCSLQFVRGSQIEPVTRFELGLRGTLVTGTMLFTL 205

Query: 244 LQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVI-ESEP 285
           LQ+LWQ +F  WHIYC+CFN+RTDEW+NWKKYPEFQVI +S+P
Sbjct: 206 LQVLWQGIFMAWHIYCICFNIRTDEWINWKKYPEFQVIAQSQP 248

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192534|gb|EEC74961.1| hypothetical protein OsI_10951 [Oryza sativa Indica Group]

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/262 (48%), Positives = 175/262 (66%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++T E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVTYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDEWVNWKKYPEFQVIE 282
           CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKE 286

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624656|gb|EEE58788.1| hypothetical protein OsJ_10323 [Oryza sativa Japonica Group]

 Score =  266 bits (680), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 126/262 (48%), Positives = 174/262 (66%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAF 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP F
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  VFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKL 140
           V FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEA 144

Query: 141 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 200
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 201 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 260
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 261 CFNVRTDEWVNWKKYPEFQVIE 282
           CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKE 286

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434978|ref|XP_002281137.1| PREDICTED: probable S-acyltransferase At2g14255-like [Vitis vinifera]

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/304 (49%), Positives = 193/304 (63%), Gaps = 39/304 (12%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLC 120
                 CRR LGV ASAPAFVFFN+LFIWG YI ++R+ +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 121 SIMSKDPGLITN---------------EFPHLD--KLVEGSELGVDPDNENSLSRKRVRY 163
           SI+S DPG +T+               +  H +  K + G      P  E S S +RVRY
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEILKTLTGGTCHEHP-TEGSFSSRRVRY 179

Query: 164 CKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK 223
           CK CKA+V+GFDHHCPAFGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D+
Sbjct: 180 CKSCKAYVKGFDHHCPAFGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDE 239

Query: 224 SQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIE 282
           +  E     NL  STMLF +LQ+LWQ                    +NWKKYPEFQ +I 
Sbjct: 240 TGQETSLSENLVISTMLFCLLQVLWQ--------------------INWKKYPEFQIIIP 279

Query: 283 SEPG 286
            +PG
Sbjct: 280 IQPG 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112878|ref|XP_003558232.1| PREDICTED: palmitoyltransferase ZDHHC17-like [Brachypodium distachyon]

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 129/272 (47%), Positives = 180/272 (66%), Gaps = 5/272 (1%)

Query: 16  LICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCA 75
           ++   ++SC LVL +QL ++ VPRFF +   +    ++GLV L    +  + RR +GV A
Sbjct: 18  VVLSALVSCGLVLFSQLAVATVPRFFPSLSLLAMLPVAGLVFLAAIVVGRFWRRFIGVAA 77

Query: 76  SAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP 135
           SAP FV FN+LF+WG YI V+R   SSL+  L N E A+++ GL  I+S DPG++  E  
Sbjct: 78  SAPLFVLFNVLFMWGVYIFVIRGDTSSLLDMLINAECALLLWGLYRILSGDPGIVAYESS 137

Query: 136 HLDKLVEGSELGVDP--DNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLF 193
            L++   G    VD    +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF
Sbjct: 138 FLEE--AGCNDFVDAICSSEKHPSLSRVRHCNSCKANVRGYDHHCPAFGNCIGQKNHRLF 195

Query: 194 IVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFF 253
           I LL GF+  E++Y  CS +++ +  N    ++EN   +N+   TMLFS+LQ+LWQ VF 
Sbjct: 196 IALLTGFVVAESTYTMCSTKYITRCINSGTIRTENPLSLNMVIGTMLFSVLQVLWQVVFL 255

Query: 254 MWHIYCVCFNVRTDEWVNWKKYPEFQVIESEP 285
           +WH+Y +CFN++TDEW+NWKKYPEFQ+ E EP
Sbjct: 256 IWHVYGICFNIKTDEWINWKKYPEFQMKE-EP 286

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495287|ref|NP_001148505.1| DHHC zinc finger domain containing protein [Zea mays] gi|223945801|gb|ACN26984.1| unknown [Zea mays] gi|414866098|tpg|DAA44655.1| TPA: DHHC zinc finger domain containing protein [Zea mays]

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/275 (44%), Positives = 175/275 (63%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIE 282
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKE 286

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195619870|gb|ACG31765.1| DHHC zinc finger domain containing protein [Zea mays]

 Score =  253 bits (647), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 121/275 (44%), Positives = 174/275 (63%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E  +++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECTLLLWGFYRILSGDP 131

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 248 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIE 282
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKE 286

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115452213|ref|NP_001049707.1| Os03g0275400 [Oryza sativa Japonica Group] gi|108707456|gb|ABF95251.1| DHHC zinc finger domain containing protein, expressed [Oryza sativa Japonica Group] gi|113548178|dbj|BAF11621.1| Os03g0275400 [Oryza sativa Japonica Group] gi|215767922|dbj|BAH00151.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 117/248 (47%), Positives = 162/248 (65%)

Query: 23  SCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVCASAPAFVF 82
           SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV ASAP FV 
Sbjct: 27  SCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLFVL 86

Query: 83  FNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE 142
           FNILF+WG Y+ V+R   SSL+  + N E AM++ GL  I S DPG++  E    ++   
Sbjct: 87  FNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEAGC 146

Query: 143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLA 202
              +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF+ 
Sbjct: 147 KDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGFVV 206

Query: 203 TEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCF 262
            E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+CF
Sbjct: 207 AESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCICF 266

Query: 263 NVRTDEWV 270
           N++TDEWV
Sbjct: 267 NIKTDEWV 274

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414866097|tpg|DAA44654.1| TPA: hypothetical protein ZEAMMB73_413571 [Zea mays]

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/275 (44%), Positives = 171/275 (62%), Gaps = 15/275 (5%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR      FI    L  L          W 
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLV----FIAAIVLGRL----------W- 56

Query: 68  RRLLGVCASAPAFVFFNILFIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDP 127
           RR +GV ASAP FV FNIL +WG Y+ V+R+  SSL+  L N E A+++ G   I+S DP
Sbjct: 57  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 116

Query: 128 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 187
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 117 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 176

Query: 188 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 247
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 177 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 236

Query: 248 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIE 282
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 237 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKE 271

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
UNIPROTKB|Q08DX8	299	ZDHHC3 "Uncharacterized protei	0.609	0.632	0.262	2.1e-10
UNIPROTKB|F1SRC6	297	ZDHHC3 "Uncharacterized protei	0.609	0.636	0.257	2.7e-10
UNIPROTKB|E2QS45	298	ZDHHC3 "Uncharacterized protei	0.609	0.634	0.257	2.7e-10
UNIPROTKB|E2RND6	299	ZDHHC3 "Uncharacterized protei	0.609	0.632	0.257	2.7e-10
MGI|MGI:1926134	299	Zdhhc3 "zinc finger, DHHC doma	0.609	0.632	0.257	4.9e-10
RGD|1309041	299	Zdhhc3 "zinc finger, DHHC-type	0.609	0.632	0.252	6.5e-10
MGI|MGI:2445110	632	Zdhhc17 "zinc finger, DHHC dom	0.496	0.243	0.305	6.8e-10
FB|FBgn0259824	637	Hip14 "Huntingtin-interacting	0.716	0.348	0.269	8.9e-10
UNIPROTKB|J9P6L2	494	ZDHHC17 "Uncharacterized prote	0.496	0.311	0.3	1e-09
UNIPROTKB|E1BJK1	634	ZDHHC17 "Uncharacterized prote	0.496	0.242	0.3	1.2e-09

UNIPROTKB|Q08DX8 ZDHHC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 54/206 (26%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I GL FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSVINGLVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE 246

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SRC6 ZDHHC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 166 (63.5 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDE 245

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2QS45 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 166 (63.5 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    46 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 105

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   106 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 164

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   165 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 223

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   224 LLFLIFTSVMFGTQVHSIC----TDE 245

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RND6 ZDHHC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 166 (63.5 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R  V S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLFS- 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F  
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEG 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE 246

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1926134 Zdhhc3 "zinc finger, DHHC domain containing 3" [Mus musculus (taxid:10090)]

 Score = 164 (62.8 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + V  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLVPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE 246

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006605 "protein targeting" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1309041 Zdhhc3 "zinc finger, DHHC-type containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 52/206 (25%), Positives = 91/206 (44%)

Query:    74 CASAPAFVFFNILFIWGFYIAVV-RQAVSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI- 130
             CA    F+     F+  F + +  R    S+I G+ FN+   + +   C  M  DPG + 
Sbjct:    47 CAIVTWFLVLYAEFVVLFVMLIPSRDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVP 106

Query:   131 ----TNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIG 186
                 T EF    +L  G  +   P    S+   R  +C +CK  +   DHHCP   NC+G
Sbjct:   107 KGNATKEFIESLQLKPGQVVYKCPKC-CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVG 165

Query:   187 QNN--YFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQSENDWVVNLATSTMLF-S 242
             +NN  YF+   + +  ++  A  +     F+    +++ K  S +     +    + F +
Sbjct:   166 ENNQKYFVLFTMYIALISLHA-LIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEA 224

Query:   243 ILQLLWQAVFFMWHIYCVCFNVRTDE 268
             +L L++ +V F   ++ +C    TDE
Sbjct:   225 LLFLIFTSVMFGTQVHSIC----TDE 246

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006605 "protein targeting" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IEA;ISO

GO:0018345 "protein palmitoylation" evidence=IEA;ISO

MGI|MGI:2445110 Zdhhc17 "zinc finger, DHHC domain containing 17" [Mus musculus (taxid:10090)]

 Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 52/170 (30%), Positives = 79/170 (46%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query:   180 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 236
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 527

Query:   237 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQV 280
             S  +F     S+   LW AV  M  +Y + C  + T+E +N ++Y  F+V
Sbjct:   528 SPWMFWMFLNSVFHFLWVAVLLMCQLYQITCLGITTNERMNARRYKHFKV 577

GO:0000139 "Golgi membrane" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO

GO:0015693 "magnesium ion transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030660 "Golgi-associated vesicle membrane" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0259824 Hip14 "Huntingtin-interacting protein 14" [Drosophila melanogaster (taxid:7227)]

 Score = 160 (61.4 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
 Identities = 70/260 (26%), Positives = 117/260 (45%)

Query:    46 FIVQFALSGXXXXXXQTLCGWCRRLLGVCASAPAFVFFNILFIWGFYIA---VVRQAVSS 102
             +I++F L G       T+ G       + A  P  V+      W FY+     +  AVS 
Sbjct:   320 YIIKFFLLGCLYSIFHTI-GKALFDEHLMALLPLSVYLATK-AW-FYVTWLMYIDDAVSF 376

Query:   103 LIGGLFNIEVAMIIIGLCSIMS--KDPGLI--TNE--FPHLDKLVEGSELGVDPDN--EN 154
                  F I  + +++ +C + S   DPG+I  T E  F  + +L E   +G +P +    
Sbjct:   377 TATVCFLI--SSLLLWVCFLKSWKGDPGIIRPTREQRFKTIIELSERGGIGFEPASFCSG 434

Query:   155 SLSRKRVR--YCKICKAHVEGFDHHCPAFGNCIGQNNY-----FLFIVLLV-GFLATEAS 206
              L R+ +R  +C +C   V  FDHHCP  GNCIG  N+     FL+++L++  ++    S
Sbjct:   435 CLVRRPIRSKHCSVCDRCVARFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMCAWMLYGGS 494

Query:   207 --YV-ACSAQF---VGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIY-C 259
               YV  C+ +F   +G  +      +   WV+  A       +L + W  +  +   Y  
Sbjct:   495 KYYVNQCNVRFDDFLGAMRAIGNCDAWVGWVMGNA-------LLHMSWVILLTICQTYQV 547

Query:   260 VCFNVRTDEWVNWKKYPEFQ 279
             +C  + T+E +N  +Y  FQ
Sbjct:   548 ICLGMTTNERMNRGRYRHFQ 567

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0045202 "synapse" evidence=IDA

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0018345 "protein palmitoylation" evidence=ISS

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISS

GO:0050714 "positive regulation of protein secretion" evidence=IMP

UNIPROTKB|J9P6L2 ZDHHC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 51/170 (30%), Positives = 79/170 (46%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   271 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 330

Query:   180 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 236
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   331 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 389

Query:   237 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQV 280
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V
Sbjct:   390 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV 439

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BJK1 ZDHHC17 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 51/170 (30%), Positives = 80/170 (47%)

Query:   126 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 179
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   411 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 470

Query:   180 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 236
               GNC+G  N  YF+  +  + F+     Y   S   +    ++ K      ++  +AT 
Sbjct:   471 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETSYTKDGFWT-YITQIATC 529

Query:   237 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQV 280
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V
Sbjct:   530 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV 579

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: 4332408 DHHC zinc finger domain containing protein, expressed (315 aa) (Oryza sativa Japonica)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	4e-17
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	3e-11

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 77.1 bits (190), Expect = 4e-17
 Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 9/164 (5%)

Query: 119 LCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLS-------RK--RVRYCKICKA 169
               +  DPG +       ++  +  E   + D E+ L         K  R  +C++C  
Sbjct: 4   YFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNR 63

Query: 170 HVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSEND 229
            V  FDHHCP   NCIG+ N+  F++ L+         +  S  ++       +      
Sbjct: 64  CVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLI 123

Query: 230 WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK 273
             +  +   ++ S+  LL+ +    +H+Y +  N+ T E++  K
Sbjct: 124 LSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEYIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 62.5 bits (152), Expect = 3e-11
 Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQF-VGKS 218
           R  +C IC   V  FDHHCP   NC+G  NY  F   L+ +    A  V  S  + +   
Sbjct: 122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLL-YTILVALVVLLSTAYYIAGI 180

Query: 219 QNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE--WVNW-KKY 275
            +     S     +    S +      +    +  ++ IY +  N+ T E   ++     
Sbjct: 181 FSIRHDTSLAICFLIFGCSLLGVVFFIIT--TLLLLFLIYLILNNLTTIEFIQISRGGST 238

Query: 276 PEFQVIESEPGKYF 289
            EF  +  E    F
Sbjct: 239 LEFFPLCRESNLPF 252

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.98
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	99.96
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	94.99
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	93.14
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	89.39
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	87.4
PF13248	26	zf-ribbon_3: zinc-ribbon domain	84.5
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	81.48
PF06906	57	DUF1272: Protein of unknown function (DUF1272); In	80.96

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.6e-43  Score=324.17  Aligned_cols=225  Identities=18%  Similarity=0.223  Sum_probs=161.9

Q ss_pred             HhHhHhhcccccchhHHHHHHHHHHHhhhhhhhccch--------hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 021625           64 CGWCRRLLGVCASAPAFVFFNILFIWGFYIAVVRQAV--------SSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP  135 (310)
Q Consensus        64 ~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~v~~~~~--------~~~~~iif~~l~~~~~~~~~~~~~~dPG~vp~~~~  135 (310)
                      .++++|   |   .|+ +++.....|.+|+++.....        .....+.++.+.++..|+|++++++|||.+|..+.
T Consensus         7 ~~~~~r---~---~~~-~~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~   79 (307)
T KOG1315|consen    7 FSKCLR---W---IPV-LIILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYR   79 (307)
T ss_pred             chhhhc---c---hhh-eeeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccC
Confidence            345555   5   666 56667888888887776432        23466678899999999999999999999998754


Q ss_pred             Cchhhh------------------cCCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHHHHHHH
Q 021625          136 HLDKLV------------------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLL  197 (310)
Q Consensus       136 ~~~~~~------------------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL  197 (310)
                      .+.++.                  ..++..++|++|+.+||+||||||.|+|||+||||||||+|||||.+|||+|++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl  159 (307)
T KOG1315|consen   80 PSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFL  159 (307)
T ss_pred             CCcCccccccccCcccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHH
Confidence            332211                  11235689999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcCCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHhhhccCccc
Q 021625          198 VGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPE  277 (310)
Q Consensus       198 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ll~~hl~lI~~n~TT~E~~~~~r~~~  277 (310)
                      +|..+.+...+.............+  ....+.......+.++.+...++.+..++++|+++|++|+||+|..+.+.+..
T Consensus       160 ~y~~l~~~~~lv~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~  237 (307)
T KOG1315|consen  160 FYTNLYSIYVLVTTLIGFTKYFQGG--AGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVFRS  237 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccccccc
Confidence            9999977665554444444433221  11122112223334455666667777899999999999999999887553332


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHhCc
Q 021625          278 FQVIESEPGKYFLQHAVVSKCKLFTLW  304 (310)
Q Consensus       278 ~~~~~~~~~~~~y~~G~~~N~~~f~~~  304 (310)
                      .     +.+++.+|.  .+|++|.+++
T Consensus       238 ~-----~~~~~~~~~--~~n~~~vfg~  257 (307)
T KOG1315|consen  238 G-----LHNKNGFNL--YVNFREVFGS  257 (307)
T ss_pred             c-----ccccCCcce--eecHHHHhCC
Confidence            1     133444555  7788887554

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.3e-41  Score=307.95  Aligned_cols=235  Identities=14%  Similarity=0.068  Sum_probs=163.4

Q ss_pred             HhHhhcccccchhHHHHHHH-HHHH-hhhh---hhhcc--chhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCch
Q 021625           66 WCRRLLGVCASAPAFVFFNI-LFIW-GFYI---AVVRQ--AVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD  138 (310)
Q Consensus        66 ~~~~~~~~~~~~p~~v~~~~-~~~~-~~~~---~v~~~--~~~~~~~iif~~l~~~~~~~~~~~~~~dPG~vp~~~~~~~  138 (310)
                      ..+|++.|   .|+..+.++ ++++ ..|.   ++.+.  ..+...++.|.+...|.+++|+.+++++||++|.++.++.
T Consensus         8 ~~rr~~hw---Gpi~alsiit~i~~~~~~~n~lww~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~   84 (414)
T KOG1314|consen    8 KFRRFLHW---GPITALSIITIITSTTGYMNSLWWFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPEN   84 (414)
T ss_pred             hhhheecc---ccHHHHHHHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence            37889999   887654433 2222 2222   22221  2345578888889999999999999999999999976643


Q ss_pred             hhhcCCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHHHHHHHHHHHHHHHHH----HHHHHHH
Q 021625          139 KLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASY----VACSAQF  214 (310)
Q Consensus       139 ~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL~~~~l~~~~~----~~~~~~~  214 (310)
                      .  .++.-.++|.+|+.+|+||||||+.|||||.+|||||||+|||||..||.+|..||++..+++.-.    ....+.-
T Consensus        85 ~--~D~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~  162 (414)
T KOG1314|consen   85 P--KDEMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRG  162 (414)
T ss_pred             C--hhHHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHH
Confidence            2  222345799999999999999999999999999999999999999999999999999988753211    1111111


Q ss_pred             hhhhc----CCCC--CcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHhhhcc----CccccccccCC
Q 021625          215 VGKSQ----NFDK--SQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK----KYPEFQVIESE  284 (310)
Q Consensus       215 ~~~~~----~~~~--~~~~~~~~~~~~i~~~l~~~~~~l~~~~ll~~hl~lI~~n~TT~E~~~~~----r~~~~~~~~~~  284 (310)
                      +...+    ....  .........+..++.+-+++...+.++.|+..|+..|.+|+|.+|.+.-+    |.+++.....+
T Consensus       163 Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d~~~  242 (414)
T KOG1314|consen  163 IYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFNDDEG  242 (414)
T ss_pred             HHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccCCCC
Confidence            11111    1111  11122333444444556667778888999999999999999999987622    22222221123


Q ss_pred             CCCCCCCHHHHHHHHHHhCcc
Q 021625          285 PGKYFLQHAVVSKCKLFTLWL  305 (310)
Q Consensus       285 ~~~~~y~~G~~~N~~~f~~~~  305 (310)
                      +=.+|||.|++.|.++++.+.
T Consensus       243 ~f~ypydlgWr~n~r~vf~~~  263 (414)
T KOG1314|consen  243 EFTYPYDLGWRINLREVFFQN  263 (414)
T ss_pred             ceeeeccccccccHHHHhhhc
Confidence            346789999999999986654

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=8.4e-40  Score=280.63  Aligned_cols=157  Identities=20%  Similarity=0.301  Sum_probs=117.6

Q ss_pred             HHHHHHHhcCCCCCCCCCCCch----------------hhhcCCCCCCCCCCCCCCCCCCcccccccCeEEecccccccc
Q 021625          117 IGLCSIMSKDPGLITNEFPHLD----------------KLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA  180 (310)
Q Consensus       117 ~~~~~~~~~dPG~vp~~~~~~~----------------~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~W  180 (310)
                      ++|+++..+|||++|+....++                +..+.+...++|.+|+..||+|||||+.||+||.|+||||||
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            5789999999999998811000                011223457899999999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021625          181 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV  260 (310)
Q Consensus       181 i~nCIG~~N~r~FilfL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~l~~~~ll~~hl~lI  260 (310)
                      +|||||++|||+|++|+++..++.+......+..+....................++.++++++..++++.++++|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987766666544444333222211111111111124456667888889999999999999


Q ss_pred             hcChhHHHhhhcc
Q 021625          261 CFNVRTDEWVNWK  273 (310)
Q Consensus       261 ~~n~TT~E~~~~~  273 (310)
                      ++|+||+|.+|+|
T Consensus       162 ~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  162 LRNITTYERIKRK  174 (174)
T ss_pred             HcCCcHHHHHHcC
Confidence            9999999999754

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=1.1e-38  Score=296.53  Aligned_cols=169  Identities=20%  Similarity=0.197  Sum_probs=119.8

Q ss_pred             cCCCCCCCCCCCchhh---h---------cCCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHH
Q 021625          125 KDPGLITNEFPHLDKL---V---------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFL  192 (310)
Q Consensus       125 ~dPG~vp~~~~~~~~~---~---------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~  192 (310)
                      +|||.+|++.+...+.   .         ..+.+.++|++|+..||+|||||+.||+||.||||||||+|||||++|||+
T Consensus        79 sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~  158 (299)
T KOG1311|consen   79 SDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRY  158 (299)
T ss_pred             CCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHH
Confidence            4999999952111111   0         011246899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCc-C--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHh
Q 021625          193 FIVLLVGFLATEASYVACSAQFVGKSQNFDKSQ-S--ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEW  269 (310)
Q Consensus       193 FilfL~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~i~~~l~~~~~~l~~~~ll~~hl~lI~~n~TT~E~  269 (310)
                      |+.|+++..++...........+.......... .  ..+......+.+.+++++.....+.++.+|++++.+|+||+|+
T Consensus       159 F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~  238 (299)
T KOG1311|consen  159 FVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYES  238 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhh
Confidence            999999777655443333333322211111111 1  1222223344445678888888899999999999999999998


Q ss_pred             hhccCccccccccCCCCCCCCCHHHHHHHHHH
Q 021625          270 VNWKKYPEFQVIESEPGKYFLQHAVVSKCKLF  301 (310)
Q Consensus       270 ~~~~r~~~~~~~~~~~~~~~y~~G~~~N~~~f  301 (310)
                      ++.  ++.      ..+.++||+|.++|+++.
T Consensus       239 ~~~--~~~------~~~~~~~~~g~~~n~~~~  262 (299)
T KOG1311|consen  239 IKS--LDF------VSRSNPYDLGLLKNLQEV  262 (299)
T ss_pred             hhc--ccc------ccccCCCchhHHHHHHHH
Confidence            864  111      122468999999999976

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2.7e-36  Score=265.76  Aligned_cols=175  Identities=16%  Similarity=0.140  Sum_probs=123.0

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCchhhhcCCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHHHH
Q 021625          115 IIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFI  194 (310)
Q Consensus       115 ~~~~~~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~Fi  194 (310)
                      ..+.|+++..+.|--.|           ..+...+|.+|+.+||||+||||.|||||+||||||||+|||||.+|||||+
T Consensus        81 vi~hy~ka~t~pPvgn~-----------~~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFF  149 (309)
T KOG1313|consen   81 VIFHYYKARTKPPVGNP-----------GLENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFF  149 (309)
T ss_pred             HHHhheeecccCCcCCC-----------CCccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHH
Confidence            34456777766651111           2234579999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCC--------CCCcCCchh----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021625          195 VLLVGFLATEASYVACSAQFVGKSQNF--------DKSQSENDW----------VVNLATSTMLFSILQLLWQAVFFMWH  256 (310)
Q Consensus       195 lfL~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----------~~~~~i~~~l~~~~~~l~~~~ll~~h  256 (310)
                      +|++|+.+++....+...+.+.+....        ++.....|-          ...-.....+.+....+.++.+..+|
T Consensus       150 lFl~~ltlat~~~~i~~~~~w~~~le~~~~~tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~  229 (309)
T KOG1313|consen  150 LFLFYLTLATSYAAIMCVYTWIDHLEPIEEITAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWH  229 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcchHhhcccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998776655433333222211        110011110          00112224455666777888999999


Q ss_pred             HHHHhcChhHHHhhhc--cCccccccccCCCCCCCCCHHHHHHHHHHhCc
Q 021625          257 IYCVCFNVRTDEWVNW--KKYPEFQVIESEPGKYFLQHAVVSKCKLFTLW  304 (310)
Q Consensus       257 l~lI~~n~TT~E~~~~--~r~~~~~~~~~~~~~~~y~~G~~~N~~~f~~~  304 (310)
                      .++|.+|.|++|....  .+-++.+    ...++|+|.|.++|||+|++-
T Consensus       230 ~vlI~~G~tsi~~~~~~~e~k~~~a----~~R~~~~n~g~k~nWr~fLg~  275 (309)
T KOG1313|consen  230 AVLISRGETSIEQLINIKERKRYLA----HLRSNPTNFGGKANWRNFLGL  275 (309)
T ss_pred             heeeehhhhhHHHHHHHHHhHhHHH----hccCCCcccchHHHHHHhhcc
Confidence            9999999999998752  2222222    234789999999999999553

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=5.1e-35  Score=271.31  Aligned_cols=188  Identities=18%  Similarity=0.293  Sum_probs=133.5

Q ss_pred             HHHhhhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCc--hh------hhcCCCCCCCCCCCCCCCC
Q 021625           87 FIWGFYIAVVRQAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHL--DK------LVEGSELGVDPDNENSLSR  158 (310)
Q Consensus        87 ~~~~~~~~v~~~~~~~~~~iif~~l~~~~~~~~~~~~~~dPG~vp~~~~~~--~~------~~~~~~~~~~C~~C~~~kP  158 (310)
                      ..|.....+..........+.+.+...+....+++...+|||+.+++....  ++      +......+++|.+|+.+||
T Consensus        41 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP  120 (309)
T COG5273          41 VVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKP  120 (309)
T ss_pred             HHHhhhheeeeccchhhhhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccC
Confidence            344433333233334455666777777888999999999999998552211  11      1223456899999999999


Q ss_pred             CCcccccccCeEEecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCchhHHHHHHHH
Q 021625          159 KRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATST  238 (310)
Q Consensus       159 ~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (310)
                      +|||||+.||+||+||||||||+|||||.+|||+|+.|+++....+...+.....++.........  ...+...++...
T Consensus       121 ~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~  198 (309)
T COG5273         121 PRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHD--TSLAICFLIFGC  198 (309)
T ss_pred             CCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC--hHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999876666655555555443322211  112212222223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhHHHhhhccCcc
Q 021625          239 MLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYP  276 (310)
Q Consensus       239 ~l~~~~~~l~~~~ll~~hl~lI~~n~TT~E~~~~~r~~  276 (310)
                      ..++...++.+..++.++.+++..|+||+|..+..|..
T Consensus       199 ~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~  236 (309)
T COG5273         199 SLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGG  236 (309)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccce
Confidence            45555566777889999999999999999988754443

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.98  E-value=6.5e-32  Score=262.00  Aligned_cols=213  Identities=23%  Similarity=0.379  Sum_probs=144.9

Q ss_pred             HHHHHHHHhhhhhhhc--cchhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCchhhh----c--CCCCC-CCCCC
Q 021625           82 FFNILFIWGFYIAVVR--QAVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLV----E--GSELG-VDPDN  152 (310)
Q Consensus        82 ~~~~~~~~~~~~~v~~--~~~~~~~~iif~~l~~~~~~~~~~~~~~dPG~vp~~~~~~~~~~----~--~~~~~-~~C~~  152 (310)
                      +..+...|.++.|...  +...+.....+.+..+..++++.+...+|||++|...+...+.-    +  +-..+ ++|.+
T Consensus       346 ~~~~~~fw~~~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~  425 (600)
T KOG0509|consen  346 FFLSTLFWFYYFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLT  425 (600)
T ss_pred             HHHHHHHHHHHhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceee
Confidence            4456667777766551  22334455556666667777888888899999998876554321    1  11234 69999


Q ss_pred             CCCCCCCCcccccccCeEEecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcCCchhHH
Q 021625          153 ENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVV  232 (310)
Q Consensus       153 C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (310)
                      |.++||.|||||+.|||||.||||||||++||||.+|||+|+.|++.....+.+++.....|+.......     ..+..
T Consensus       426 clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~-----~~~~~  500 (600)
T KOG0509|consen  426 CLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENAS-----TIYVG  500 (600)
T ss_pred             eeeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-----HHHHH
Confidence            9999999999999999999999999999999999999999999999988877777765555543311100     11111


Q ss_pred             HHHHHHHHHHH-------------HHHHHHHHHH-HHHHHHHhcChhHHHhhhccCccccccccCCCCCCCCCHHHHHHH
Q 021625          233 NLATSTMLFSI-------------LQLLWQAVFF-MWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGKYFLQHAVVSKC  298 (310)
Q Consensus       233 ~~~i~~~l~~~-------------~~~l~~~~ll-~~hl~lI~~n~TT~E~~~~~r~~~~~~~~~~~~~~~y~~G~~~N~  298 (310)
                      .+.. +..+..             +.-.+..... ..|-..++.+.||+|.++.+|+++++..+ ...++|++.|+.+|+
T Consensus       501 ~l~~-~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~-~~~~~~~s~g~~~Nl  578 (600)
T KOG0509|consen  501 FLIA-VQAFRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKR-GPTRSPFSPGPIRNL  578 (600)
T ss_pred             HHHH-HHHHhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhcccccc-CcCCCCCCchhhhcc
Confidence            1100 000000             0001222222 23334579999999999999999988633 335778999999999


Q ss_pred             HHH
Q 021625          299 KLF  301 (310)
Q Consensus       299 ~~f  301 (310)
                      .||
T Consensus       579 ~df  581 (600)
T KOG0509|consen  579 VDF  581 (600)
T ss_pred             hhe
Confidence            998

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=99.96  E-value=5.8e-30  Score=226.90  Aligned_cols=105  Identities=27%  Similarity=0.442  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCCch-hhhcCC----CCCCCCCCCCCCCCCCcccccccCeEEecccccccccccc
Q 021625          110 IEVAMIIIGLCSIMSKDPGLITNEFPHLD-KLVEGS----ELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNC  184 (310)
Q Consensus       110 ~l~~~~~~~~~~~~~~dPG~vp~~~~~~~-~~~~~~----~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nC  184 (310)
                      ...++-.++++.++.+|||.+.++..... +.-+.|    .....|+||+..||.||||||.||+||.||||||.|+|||
T Consensus       106 l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfDHHCiWiNNC  185 (341)
T KOG1312|consen  106 LLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFDHHCIWINNC  185 (341)
T ss_pred             HHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCCCccccccCCCccccccchHHHHHHHHhccceEeeecc
Confidence            33445566788899999999987754322 111111    2347899999999999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021625          185 IGQNNYFLFIVLLVGFLATEASYVACSAQFV  215 (310)
Q Consensus       185 IG~~N~r~FilfL~~~~l~~~~~~~~~~~~~  215 (310)
                      ||++|.|||++|+.+... .+.+......++
T Consensus       186 IG~~N~ryF~lFLL~~i~-l~~yaivrlgfi  215 (341)
T KOG1312|consen  186 IGAWNIRYFLLFLLTLIS-LATYAIVRLGFI  215 (341)
T ss_pred             cccchHHHHHHHHHHHHH-HHHHHHHHHHhe
Confidence            999999999999998843 455554444333

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=94.99  E-value=0.094  Score=49.20  Aligned_cols=148  Identities=12%  Similarity=-0.021  Sum_probs=89.3

Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC
Q 021625          143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFD  222 (310)
Q Consensus       143 ~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL~~~~l~~~~~~~~~~~~~~~~~~~~  222 (310)
                      ++.+.++|+.|+.=....-|||.-=|+||.+..|           +=.-.|++++....+..................+.
T Consensus       119 KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (309)
T COG5273         119 KPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDT  187 (309)
T ss_pred             cCCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCh
Confidence            4567899999999999999999999999998665           45667887775555444433332222221111111


Q ss_pred             CCc------CCchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHhhhccCcc--ccccc-cCCCCCCCCCH
Q 021625          223 KSQ------SENDWVV-NLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYP--EFQVI-ESEPGKYFLQH  292 (310)
Q Consensus       223 ~~~------~~~~~~~-~~~i~~~l~~~~~~l~~~~ll~~hl~lI~~n~TT~E~~~~~r~~--~~~~~-~~~~~~~~y~~  292 (310)
                      ...      ....... .+.+...++...+..+.......+.+.+.++.++-|.....+.+  .++.. ++++...|++.
T Consensus       188 ~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  267 (309)
T COG5273         188 SLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDL  267 (309)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCcccccccc
Confidence            111      1111111 12222333444455666677888899999999999987655544  12222 22345667888


Q ss_pred             HHHHHHHHH
Q 021625          293 AVVSKCKLF  301 (310)
Q Consensus       293 G~~~N~~~f  301 (310)
                      |.-+|++..
T Consensus       268 ~~~~~~~~i  276 (309)
T COG5273         268 GIGQNLSTI  276 (309)
T ss_pred             Cccccceee
Confidence            888887665

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.14  E-value=1.4  Score=37.07  Aligned_cols=53  Identities=11%  Similarity=0.037  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccCeEEecccccccccccccccchHHHHHHHHHHHHHHHHH
Q 021625          143 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEAS  206 (310)
Q Consensus       143 ~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~r~FilfL~~~~l~~~~  206 (310)
                      ++.+.++|+.|+.-...+-|||.--|.||.+..|           +.+=.|+.+.....+....
T Consensus        58 kp~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~  110 (174)
T PF01529_consen   58 KPPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFI  110 (174)
T ss_pred             CCCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHH
Confidence            4456789999999999999999999999998776           3455676666544444443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=89.39  E-value=1.3  Score=41.08  Aligned_cols=42  Identities=17%  Similarity=0.414  Sum_probs=35.3

Q ss_pred             CcccccccCeEEecccccccccccccccchH-----------HHHHHHHHHHH
Q 021625          160 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY-----------FLFIVLLVGFL  201 (310)
Q Consensus       160 Rs~HC~~C~~CV~r~DHHC~Wi~nCIG~~N~-----------r~FilfL~~~~  201 (310)
                      +.|+|..|+..+.++-|||..=|+||-+.=|           |.+-.|+.++.
T Consensus       112 ~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~  164 (299)
T KOG1311|consen  112 EWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF  164 (299)
T ss_pred             ceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence            3799999999999999999999999988654           67778885554

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=87.40  E-value=0.35  Score=27.14  Aligned_cols=21  Identities=14%  Similarity=0.298  Sum_probs=18.8

Q ss_pred             CCCCCCCCCCCCcccccccCe
Q 021625          149 DPDNENSLSRKRVRYCKICKA  169 (310)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~~  169 (310)
                      +|+.|...-++.++.|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            589999999999999999985

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=84.50  E-value=0.62  Score=26.85  Aligned_cols=22  Identities=18%  Similarity=0.283  Sum_probs=19.3

Q ss_pred             CCCCCCCCCCCCCcccccccCe
Q 021625          148 VDPDNENSLSRKRVRYCKICKA  169 (310)
Q Consensus       148 ~~C~~C~~~kP~Rs~HC~~C~~  169 (310)
                      .+|+.|...-++.++.|+.||.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6799999988999999999985

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=81.48  E-value=0.85  Score=30.33  Aligned_cols=25  Identities=16%  Similarity=-0.001  Sum_probs=22.1

Q ss_pred             CCCCCCCCCCCCCCCCcccccccCe
Q 021625          145 ELGVDPDNENSLSRKRVRYCKICKA  169 (310)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~  169 (310)
                      ....+|..|...-|+|+..|+.||.
T Consensus        12 ~~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         12 FNKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             hcccchhcccCCCCccccccccCCC
Confidence            3457899999999999999999886

>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length

Probab=80.96  E-value=0.6  Score=32.12  Aligned_cols=36  Identities=22%  Similarity=0.444  Sum_probs=28.9

Q ss_pred             CCCCCCCCCCCCc-------ccccccCeEEecc-ccccccccccccc
Q 021625          149 DPDNENSLSRKRV-------RYCKICKAHVEGF-DHHCPAFGNCIGQ  187 (310)
Q Consensus       149 ~C~~C~~~kP~Rs-------~HC~~C~~CV~r~-DHHC~Wi~nCIG~  187 (310)
                      -|+.|+.--|+.|       +-|..|..|+..+ +++||   ||=|.
T Consensus         7 nCE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe   50 (57)
T PF06906_consen    7 NCECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE   50 (57)
T ss_pred             CccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence            4777877666654       6688999999998 99999   88775

This family contains a number of conserved cysteine residues and its function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	80.55

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=80.55  E-value=0.32  Score=32.03  Aligned_cols=29  Identities=7%  Similarity=-0.105  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCCCCCCcccccccCeEEec
Q 021625          145 ELGVDPDNENSLSRKRVRYCKICKAHVEG  173 (310)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r  173 (310)
                      .....|+.|...-|+++..|+.||.--+|
T Consensus        12 ~~k~iCpkC~a~~~~gaw~CrKCG~~~lr   40 (51)
T 3j21_g           12 FKKYVCLRCGATNPWGAKKCRKCGYKRLR   40 (51)
T ss_dssp             SSEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred             hCCccCCCCCCcCCCCceecCCCCCcccc
Confidence            34578999999999999999999875443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	310
d2dkta2	56	RING finger and CHY zinc finger domain-containing	82.97
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	82.77

>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Zinc hairpin stack
superfamily: Zinc hairpin stack
family: Zinc hairpin stack
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.97  E-value=0.22  Score=31.77  Aligned_cols=30  Identities=13%  Similarity=0.194  Sum_probs=20.8

Q ss_pred             CCCCCCCCCCCCcccccccCeEEecc--c-ccc
Q 021625          149 DPDNENSLSRKRVRYCKICKAHVEGF--D-HHC  178 (310)
Q Consensus       149 ~C~~C~~~kP~Rs~HC~~C~~CV~r~--D-HHC  178 (310)
                      .|..|++-....-.||..||.|+..-  | |.|
T Consensus        22 ~CgiCRvG~~~~ffHC~~C~~C~~~~l~~~H~C   54 (56)
T d2dkta2          22 SCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKC   54 (56)
T ss_dssp             TTTEEEESCGGGEEEETTTTEEEEGGGSSSSCC
T ss_pred             CCCceeecCCccccccCccccccCcccCCCccc
Confidence            35556666667788899999998652  3 555

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=82.77  E-value=0.25  Score=31.29  Aligned_cols=25  Identities=20%  Similarity=0.264  Sum_probs=21.8

Q ss_pred             CCCCCCCCCCCCCCCCcccccccCe
Q 021625          145 ELGVDPDNENSLSRKRVRYCKICKA  169 (310)
Q Consensus       145 ~~~~~C~~C~~~kP~Rs~HC~~C~~  169 (310)
                      ....+|..|...-|+|+..|+.|+.
T Consensus        17 ~~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          17 FLKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhhHHHhhccccCCccccccccCCC
Confidence            3457899999999999999998875