Citrus Sinensis ID: 021628

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Secondary Structure (PSIPRED)
cEEEEEcccccccccEEEcccccccccccccEEEEEEEEEccHHHHHHHccccccccccccccccccccEEEEEEcccccccccccEEEEEcccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHHcccccEEEEccccccHHHHHHccccEEEEccccccccccccccEEEEccccHHHHHHHHccccEEEEEcccccccccEEEEEEcHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccHHHEEEEHccccccccccccEEEEEEEEEccHHHHHHHccccccccccccEEccccEEEEEEEEcccccccccccEEEEccccccccccccccccEcEEEEccHHHEEEcccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHccccEEEEccccHHHHHHHHccccEEEEEEccccccccEEEEcccHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccEEEEEEEccc
Coil and Loop (DISEMBL)
MKAWVYKEygnsqsvlkfetnvevpslreDQVLIKVVAAALNPIDFKRMlgafsatdsplptipgydvaGVVEKVGSqvkkfkvgdevygdinekaldhpkrngslaEYTAVEENLLalkpknlsfveaaslplatETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAskvaatssTAKLDLLRSLGADLAIDYTkeniedlpekFDVVFDAVGQCDKALKAVKEGGRVVSIigsvtppassfvltsdgsileklnpyfesgkvkaiidpkgpfpfsqtLEAFSHLessratgkvvihpip
Flexible Loop (DISEMBL)
mkawvykeygnsqsvlkfETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDinekaldhpkrngSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSiigsvtppassfvltsDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHlessratgkvvihpip
Low Complexity Region (SEG)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGaskvaatsstakLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Disordered region (IsUnstruct)
***WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD******SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL*********************
Disordered Region (DISOPRED)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Disordered Region (DISEMBL)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Disordered Region (DISPRO)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
Q9ZUC1	386	Quinone oxidoreductase-li	yes	no	0.996	0.800	0.722	1e-129
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.945	0.757	0.337	5e-34
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.932	0.729	0.324	6e-34
Q924D0	396	Reticulon-4-interacting p	yes	no	0.938	0.734	0.319	1e-32
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.945	0.890	0.348	9e-32
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.951	0.744	0.307	2e-31
O42909	347	Zinc-type alcohol dehydro	yes	no	0.954	0.853	0.321	5e-31
Q54II4	352	Reticulon-4-interacting p	yes	no	0.964	0.849	0.271	2e-27
Q9SV68	329	Putative quinone-oxidored	no	no	0.958	0.902	0.313	2e-26
P54006	297	Protein TOXD OS=Cochliobo	N/A	no	0.674	0.703	0.351	2e-25

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  460 bits (1184), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/310 (72%), Positives = 267/310 (86%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY +YG    VLK E+N+ VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 78  MKAWVYSDYGGVD-VLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 136

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGS VK  K GDEVY +++EKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALK 196

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+GASKV
Sbjct: 197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV+
Sbjct: 257 AATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVA 316

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G +L+KLNPY ESGKVK ++DPKGPFPFS+  +AFS+LE++ A
Sbjct: 317 LTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHA 376

Query: 301 TGKVVIHPIP 310
           TGKVV++PIP
Sbjct: 377 TGKVVVYPIP 386

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  145 bits (365), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 181/364 (49%), Gaps = 71/364 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSAT--- 56
           M AWV  +YG +  VL+F  N  +P +   ++V++KV AA LNPID     G  +AT   
Sbjct: 29  MPAWVIDKYGKN-DVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAM 87

Query: 57  -DSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P I G DV+G + + G  VK FK GD+V+  I       P + GSL
Sbjct: 88  KRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP------PWKQGSL 141

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYE------GLERSAFSAGKSILVLGGA 160
           AE+  V  N ++ KPK+L   EAAS+P    TA+       GL +   SA K +L+LGG+
Sbjct: 142 AEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDN-SAKKRVLILGGS 200

Query: 161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT----KENIEDLPEKFD 216
           GGVGT  IQ+ K  +GA  V  T S     L+R LGAD  +DYT    ++ +++L EKFD
Sbjct: 201 GGVGTFAIQMVK-AWGA-HVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNL-EKFD 257

Query: 217 VVFDAV-GQCDK-ALKAVK--EGGRVVSIIGSVTPPASSFVLTS---------------- 256
           ++ D++ G+ +K AL  +K   G + V++I           L                  
Sbjct: 258 LILDSIGGETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKN 317

Query: 257 --------------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG 302
                          GS L++++   ++GKV+ +++    F F+Q  EAF  +E   A G
Sbjct: 318 LRKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEE--VFSFAQVPEAFQKVEQGHARG 375

Query: 303 KVVI 306
           K V+
Sbjct: 376 KTVV 379

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  144 bits (364), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 175/370 (47%), Gaps = 81/370 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG S  VL+F  N+ +P +   ++V+IKV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYG-SNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  V+ FK GDEV+  +       P + G+L
Sbjct: 102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KP++L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVV 218
           GVGT  IQ+ K     + V A  S    +L+R LGAD  IDY   N+E      + FD +
Sbjct: 216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFI 273

Query: 219 FDAVGQCDK--ALKAVKE--GGRVVSIIGSVTPPASSFVLTSD----------------- 257
            D VG   +  ALK +K+  G   V++   VTP    F+L  D                 
Sbjct: 274 LDNVGGSTETWALKFLKKWSGATYVTL---VTP----FLLNMDRLGIADGMLQTGVTVGS 326

Query: 258 --------------------GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLES 297
                               G  L+ +    E+GK++ +I+    FPFS+  EAF  +E 
Sbjct: 327 KTLKHFWQGVHYRWAFFMASGPCLDDIAELVEAGKIQPVIEKT--FPFSKVPEAFLKVER 384

Query: 298 SRATGKVVIH 307
             A GK VI+
Sbjct: 385 GHARGKTVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  140 bits (353), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 180/372 (48%), Gaps = 81/372 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG ++ VL+F  N+ +P +   ++V+IKV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYGKNE-VLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  VK F+ GDEV+  +       P + G+L
Sbjct: 102 KRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK  L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
           GVGT  IQ+ K  +GA   A  S  A  +L+R LGAD  IDYT  ++E+  +    FD +
Sbjct: 216 GVGTFAIQVMK-AWGAHVTAVCSKDAS-ELVRKLGADEVIDYTLGSVEEQLKSLKLFDFI 273

Query: 219 FDAVGQCDK--ALKAVKE--GGRVVSIIGSVTPPASSFVLTSD----------------- 257
            D VG   +  AL  +K+  G   V++   VTP    F+L  D                 
Sbjct: 274 LDNVGGSTETWALNFLKKWSGATYVTL---VTP----FLLNMDRLGVADGMLQTGVTVGT 326

Query: 258 --------------------GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLES 297
                               G  L+++    ++GK++ +I+    FPFS+  EAF  +E 
Sbjct: 327 KALKHLWQGVHYRWAFFMASGPYLDEIAELVDAGKIRPVIERT--FPFSEVPEAFLKVER 384

Query: 298 SRATGKVVIHPI 309
             A GK V++ +
Sbjct: 385 GHARGKTVVNVV 396

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  137 bits (345), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 162/339 (47%), Gaps = 46/339 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSP 59
           M A  Y  YG     LK    V VP  + D++L+K+ AA LNPID+K   G         
Sbjct: 6   MHAIQYSGYGGGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRK 64

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            PTIPG DVAG V + GS V +FK GD+V        L H    G+LAEY   +ENL   
Sbjct: 65  FPTIPGTDVAGEVVQAGSAVNRFKTGDKVVA-----VLSH-ATGGALAEYAVAKENLTVA 118

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA------FSAGKSILVLGGAGGVGTMVIQLAKH 173
           +P  +S  E A+LP+A  TA++ L + A          K+IL+   +GGVG   +QLAK 
Sbjct: 119 RPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK- 177

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP----EKFD-VVFDAVGQCDKA 228
             G + V AT     LD ++ LGAD  +DY       L     +K+D VV  A G     
Sbjct: 178 -LGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWST 236

Query: 229 LKA-VKEGGRVVSIIGSVTPPASSFV------LTSDGSILEKL-----NPYFE------- 269
            +  + E G+V+ +    TP  ++ +      LT     L  L      P FE       
Sbjct: 237 FEPNLSEAGKVIDL----TPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVK 292

Query: 270 SGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             K+K +ID K   P S+  +A+S +    ATGK++I P
Sbjct: 293 EKKLKTVIDSK--HPLSKGEDAWSRIMGGHATGKIIIEP 329

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  136 bits (343), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 69/364 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
           M AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A + 
Sbjct: 43  MPAWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 101

Query: 56  TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
              PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct: 102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 155

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
           GVGT  IQ+ K     + V A  S    +L+R LGAD  IDY   ++E+  +    FD +
Sbjct: 216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 273

Query: 219 FDAVGQ----------------------------------CDKALK-AVKEGGRVVSIIG 243
            D VG                                    D  L+  V  G + +    
Sbjct: 274 LDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 333

Query: 244 SVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 303
                  +F + S G  L+ +    ++GK++ +I+    FPFS+  EAF  +E   A GK
Sbjct: 334 KGVHYRWAFFMAS-GPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGK 390

Query: 304 VVIH 307
            VI+
Sbjct: 391 TVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score =  135 bits (339), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 158/339 (46%), Gaps = 43/339 (12%)

Query: 3   AWVYKEYGNSQSVLKFETNVEVPS---LREDQVLIKVVAAALNPIDFKRM--LGAFSATD 57
           AW+Y   G  + VL  E  + +P+   L    VL++VVA ++NP+D+K M      +   
Sbjct: 14  AWLYNRTGKPKDVLYLEKGLHIPNPAELGPYDVLVEVVATSINPLDYKLMNTYQMIAKAL 73

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
             LP IPGYD AG V  VGS+VK+F     V+G   +      ++ GS A +    +  +
Sbjct: 74  FKLPNIPGYDFAGRVLAVGSEVKEFSATQRVWG--CQSFPRAGRQGGSCATHIVTGDKDV 131

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P  +SF E A   +A  TA+E L R      G  +++ G +GGVGT  + LAK +  
Sbjct: 132 WHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKAL-- 189

Query: 177 ASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPE--KFDVVFDAVGQCDKAL---- 229
             +V   SST  LDL +SLGA   +DY K+N +E L +   +D VFD V   D  L    
Sbjct: 190 ECEVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVN--DNVLYRAS 247

Query: 230 -KAVKEGGRVVSIIGSVT---------------------PPASSFVLTSDGSILEKLNPY 267
            K VK  G    I G +T                         + +L  D  +L     +
Sbjct: 248 SKFVKPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEMLRDFVDF 307

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                +K +ID    + F  T+EAF+ L + R  GKV+I
Sbjct: 308 VMKHNIKTVIDS--VYDFEDTVEAFNRLMTHRCKGKVII 344

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  123 bits (308), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 172/357 (48%), Gaps = 58/357 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSP 59
           MK  +   YG S  +L+++T++ VP   + QVLIK+ + ++NP+D     G A S  D  
Sbjct: 1   MKGILLNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLK 60

Query: 60  L--PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
           L  P I G + +G + ++G  V  +++GD+V+      +   P   GS  EY  V+E+ +
Sbjct: 61  LKLPIILGRECSGEIVEIGDSVWDYEIGDQVW------SASPPFSMGSHCEYITVDESEI 114

Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-----ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           +LKPKNL+  ++AS+P A+ TA+  +          +    ILV GG G VG  ++QL K
Sbjct: 115 SLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLK 174

Query: 173 HVFGASKVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLP-EKFDVVFDAV----GQCD 226
                ++V+ T +    + L+ L   +  IDY    I D    KFD++F+       Q +
Sbjct: 175 KHLNVNQVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNE 234

Query: 227 ---KALKAVKEGGRVVSI------------------IGSVTPPASS-------------- 251
              K + A+K+GG ++                    +G +    SS              
Sbjct: 235 NEKKCIDALKDGGNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKNVHLD 294

Query: 252 -FVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
             + +  GS L++++  +E+  +   ID +  F  +Q  +A++  E+S + GK++I+
Sbjct: 295 YAIFSPSGSTLKQISKLYENNILIPNIDKQ--FNLNQIKDAYTCFENSNSNGKIIIN 349

Dictyostelium discoideum (taxid: 44689)

>sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 153/335 (45%), Gaps = 38/335 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSP 59
           M A  Y  YG   + L+    V VP+ + ++V +K+ A +LNP+D+K   G         
Sbjct: 6   MHALQYNSYGGGAAGLE-HVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPFLPRK 64

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P IP  DVAG V +VGS VK FK GD+V   ++          G LAE+    E L   
Sbjct: 65  FPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLG------GGGLAEFAVATEKLTVK 118

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAF----SAGK--SILVLGGAGGVGTMVIQLAKH 173
           +P+ +   EAA+LP+A  TA + L   A       GK  +ILV   +GGVG   +QLAK 
Sbjct: 119 RPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAK- 177

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKAL---- 229
               + V AT     ++ ++SLGAD  +DY       L       +DAV  C   +    
Sbjct: 178 -LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSV 236

Query: 230 --KAVKEGGRVVSI-----------IGSVTPPASSFV---LTSDGSILEKLNPYFESGKV 273
               + E G+V+ I           +  +T      V   L      LE +    + GKV
Sbjct: 237 FEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKV 296

Query: 274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           K +ID K   P S+  +A++      ATGK+++ P
Sbjct: 297 KTVIDSK--HPLSKAEDAWAKSIDGHATGKIIVEP 329

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P54006|TOXD_COCCA Protein TOXD OS=Cochliobolus carbonum GN=TOXD PE=3 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 125/239 (52%), Gaps = 30/239 (12%)

Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK-F 82
           +P LR+D +L++ V+ ALNP D+K +L       SP   + G D AG+VE+VG  VKK F
Sbjct: 23  IPKLRDDYILVRTVSVALNPTDWKHILRL-----SPPGCLVGCDYAGIVEEVGRSVKKPF 77

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142
           K GD V G  +         +G+ AE   V+ ++ A  P+NLSF EAA+L +  +T  +G
Sbjct: 78  KKGDRVCGFAHGGNAVFSD-DGTFAEVITVKGDIQAWIPENLSFQEAATLGVGIKTVGQG 136

Query: 143 LERSA--------FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS 194
           L +S               IL+ GG+   GT+ IQLAK      +V  T S    +L++S
Sbjct: 137 LYQSLKLSWPTTPIEHAVPILIYGGSTATGTLAIQLAK--LSGYRVITTCSPHHFELMKS 194

Query: 195 LGADLAIDY----TKENIEDLPE-KFDVVFDAVGQ------CDKALKAVKEGGRVVSII 242
           LGADL  DY    + ++I    + K  +VFD +        CD+A+    EGG   +++
Sbjct: 195 LGADLVFDYHEITSADHIRRCTQNKLKLVFDTISIDVSARFCDRAMST--EGGEYSALL 251

Unique to isolates that make the cyclic peptide HC-toxin, but has no role in toxin biosynthesis.

Cochliobolus carbonum (taxid: 5017)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
307135978	383	alcohol dehydrogenase [Cucumis melo subs	0.996	0.806	0.780	1e-138
118481558	322	unknown [Populus trichocarpa]	1.0	0.962	0.796	1e-136
449434925	383	PREDICTED: quinone oxidoreductase-like p	0.996	0.806	0.770	1e-136
310747931	383	chloroplastic alkenal/one oxidoreductase	0.996	0.806	0.767	1e-135
449478569	383	PREDICTED: quinone oxidoreductase-like p	0.996	0.806	0.767	1e-135
255568816	389	alcohol dehydrogenase, putative [Ricinus	0.996	0.794	0.764	1e-135
356567630	395	PREDICTED: quinone oxidoreductase-like p	0.996	0.782	0.761	1e-133
356526809	397	PREDICTED: quinone oxidoreductase-like p	0.996	0.778	0.761	1e-133
388495252	387	unknown [Lotus japonicus]	0.996	0.798	0.741	1e-132
118488941	383	unknown [Populus trichocarpa x Populus d	0.996	0.806	0.745	1e-131

>gi|307135978|gb|ADN33837.1| alcohol dehydrogenase [Cucumis melo subsp. melo]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/310 (78%), Positives = 277/310 (89%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+T+V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDTSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLALK
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLALK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ F++AA LPLA ETAYEGLE++ FSAGKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFIQAAGLPLAIETAYEGLEKTNFSAGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKGPFPFSQ +EAF+++ESSRA
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFPFSQVVEAFAYVESSRA 373

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 374 TGKVVIHPIP 383

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481558|gb|ABK92721.1| unknown [Populus trichocarpa]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/310 (79%), Positives = 280/310 (90%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYGN  +VLK ++NV VP ++EDQVLIKVVAA++NP+D KRMLG F  +DSP+
Sbjct: 13  MKAWVYGEYGNVSNVLKLDSNVTVPQVKEDQVLIKVVAASINPVDAKRMLGMFKVSDSPV 72

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ KVGDEVYGDINEKALDHPKR GSLAEYTAVEENLL+LK
Sbjct: 73  PTVPGYDVAGVVVKVGSQVKRLKVGDEVYGDINEKALDHPKRFGSLAEYTAVEENLLSLK 132

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNLSF EAASLPL  ETA+EGLER+ FSAGKSILVLGGAGGVGT +IQLAKHVFGAS V
Sbjct: 133 PKNLSFAEAASLPLVIETAHEGLERTGFSAGKSILVLGGAGGVGTQIIQLAKHVFGASTV 192

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST+KL+LL+SLGADLAIDYTKEN EDLPEKFDVV+DAVGQCD+A+KAVKE G VV+
Sbjct: 193 AATSSTSKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAVGQCDRAVKAVKEDGSVVT 252

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           I+G +TPPA  FVLTS+GS+L+KL PY ESGKVK ++DPKGPFPFSQT EAFS+LE+SRA
Sbjct: 253 IVGPITPPALIFVLTSNGSVLDKLKPYLESGKVKPVLDPKGPFPFSQTAEAFSYLETSRA 312

Query: 301 TGKVVIHPIP 310
            GKVVI+PIP
Sbjct: 313 VGKVVIYPIP 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434925|ref|XP_004135246.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cucumis sativus]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/310 (77%), Positives = 275/310 (88%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKGPF FSQ +EAF+++ESSRA
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFSFSQVVEAFAYVESSRA 373

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 374 TGKVVIHPIP 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310747931|dbj|BAJ23910.1| chloroplastic alkenal/one oxidoreductase [Cucumis sativus]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/310 (76%), Positives = 275/310 (88%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VK+GG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKKGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKGPF FSQ +EAF+++ESSRA
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFSFSQVVEAFAYVESSRA 373

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 374 TGKVVIHPIP 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478569|ref|XP_004155355.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Cucumis sativus]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/310 (76%), Positives = 275/310 (88%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+++V VP ++EDQVLIKVVAAALNP+D KRMLG F ATDSPL
Sbjct: 75  MKAWVYGEYGGVD-VLKFDSSVSVPEVKEDQVLIKVVAAALNPVDGKRMLGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK+ K GDEVYG+INEKALD PK+ GSLAEYTAVEE LLA+K
Sbjct: 134 PTVPGYDVAGVVVKVGSQVKELKEGDEVYGNINEKALDGPKQFGSLAEYTAVEEKLLAVK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKN+ FV+AA LPLA ETAYEGLE++ FS GKSILVL GAGGVG++VIQLAK+VFGASKV
Sbjct: 194 PKNIDFVQAAGLPLAIETAYEGLEKTNFSTGKSILVLNGAGGVGSLVIQLAKNVFGASKV 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT+ST KL+ L+SLG DLAIDYTKENIEDLPEKFDVV+DA+GQCDKA+K VK+GG VV+
Sbjct: 254 AATASTGKLEFLKSLGVDLAIDYTKENIEDLPEKFDVVYDAIGQCDKAVKVVKKGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TSDG++L+KLNPY ESGKVK I+DPKGPF FSQ +EAF+++ESSRA
Sbjct: 314 LTGAVTPPGFRFVVTSDGAVLKKLNPYLESGKVKPIVDPKGPFSFSQVVEAFAYVESSRA 373

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 374 TGKVVIHPIP 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568816|ref|XP_002525379.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223535342|gb|EEF37017.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/310 (76%), Positives = 272/310 (87%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF+  V VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 81  MKAWVYGEYGGVD-VLKFDEKVSVPEVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 139

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAG+V KVGS+VK+ K GDEVYGDINEKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 140 PTVPGYDVAGIVVKVGSKVKELKEGDEVYGDINEKALEGPKQFGSLAEYTAVEEKLLALK 199

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL FV+AASLPLA ETAYEGLER+ FSAGKSILVL G+GGVG++VIQLAKHVFGASKV
Sbjct: 200 PKNLDFVQAASLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKHVFGASKV 259

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATS T  L++L+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKEGG VV+
Sbjct: 260 AATSGTRNLEILKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVA 319

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G +L+KLNPY ESGKVK +IDPKGPFPFSQ  EAFS++E++RA
Sbjct: 320 LTGAVTPPGFRFVVTSNGDVLKKLNPYLESGKVKPVIDPKGPFPFSQVAEAFSYIETNRA 379

Query: 301 TGKVVIHPIP 310
           TGK+VIHPIP
Sbjct: 380 TGKIVIHPIP 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567630|ref|XP_003552020.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/310 (76%), Positives = 269/310 (86%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLK ++NV VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 87  MKAWVYGEYGGVD-VLKLDSNVTVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 145

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK FKVGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 146 PTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLASK 205

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AA+LPLA ETAYEGLER+ FS GKSILVL G+GGVG++VIQLAK VFGAS+V
Sbjct: 206 PKNLDFAQAAALPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVFGASRV 265

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST  LDLL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKEGG VV+
Sbjct: 266 AATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVA 325

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G++L KLNPY ESGKVK I+DPKGPF F +  EAFS+LE++RA
Sbjct: 326 LTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPIVDPKGPFSFDKLAEAFSYLETNRA 385

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 386 TGKVVIHPIP 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526809|ref|XP_003532009.1| PREDICTED: quinone oxidoreductase-like protein At1g23740, chloroplastic-like [Glycine max]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/310 (76%), Positives = 268/310 (86%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLK ++NV VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 89  MKAWVYGEYGGVD-VLKLDSNVAVPDVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 147

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGSQVK FKVGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 148 PTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPK 207

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AASLPLA ETAYEGLER+ FS GKSILVL G+GGVG++VIQLAK V+GAS+V
Sbjct: 208 PKNLDFAQAASLPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVYGASRV 267

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST  LDLL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KAVKE G VV+
Sbjct: 268 AATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEDGSVVA 327

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G +L KLNPY ESGKVK I+DPKGPFPF +  EAFS+LE++RA
Sbjct: 328 LTGAVTPPGFRFVVTSNGEVLRKLNPYLESGKVKPIVDPKGPFPFDKLAEAFSYLETNRA 387

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 388 TGKVVIHPIP 397

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495252|gb|AFK35692.1| unknown [Lotus japonicus]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 230/310 (74%), Positives = 270/310 (87%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWVY EYG    VLKF++NV VP L+EDQVL++VVAAALNP+D KR  G F ATDSPL
Sbjct: 79  MKAWVYGEYGGVD-VLKFDSNVAVPDLKEDQVLVRVVAAALNPVDAKRRQGKFKATDSPL 137

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVGS+VK+F+VGDEVYGD+NEKAL+ PK+ GSLAEYTAVEE LLA K
Sbjct: 138 PTVPGYDVAGVVVKVGSEVKEFRVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPK 197

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F +AASLPLA ETAYEGLER+ FS+GKSILVL G+GGVG++VIQLAK VFGA++V
Sbjct: 198 PKNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGAARV 257

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AAT  T  L+LL+SLG DLAIDYTKEN EDLPEKFDVV+DA+GQCD+A+KA+KEGG VV+
Sbjct: 258 AATPGTRNLELLKSLGVDLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVA 317

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G++L KLNPY ESGKVK I+D KGPFPF+Q  EAFS+LE++RA
Sbjct: 318 LTGAVTPPGFRFVVTSNGTVLRKLNPYLESGKVKPIVDSKGPFPFTQLAEAFSYLETNRA 377

Query: 301 TGKVVIHPIP 310
           TGKVVIHPIP
Sbjct: 378 TGKVVIHPIP 387

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488941|gb|ABK96279.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/310 (74%), Positives = 269/310 (86%), Gaps = 1/310 (0%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA VY EYG  + VLKF+  V VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct: 75  MKACVYGEYGGVE-VLKFDDKVSVPEVKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 133

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           PT+PGYDVAGVV KVG+QVK+ K GD VYG+INEKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct: 134 PTVPGYDVAGVVVKVGNQVKELKEGDAVYGNINEKALEGPKQFGSLAEYTAVEEKLLALK 193

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           PKNL F++AA LPLA ETAYEGLER+ FSAGKSILVL GAGGVG++VIQLAKHVFGAS++
Sbjct: 194 PKNLDFIQAAGLPLAIETAYEGLERTGFSAGKSILVLNGAGGVGSLVIQLAKHVFGASRI 253

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
           AATSST KL+LL+SLGADLAIDYTKEN EDLPEKFDVV+DA+GQCDKA+K VKEGG VV+
Sbjct: 254 AATSSTGKLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDKAVKVVKEGGSVVA 313

Query: 241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
           + G+VTPP   FV+TS+G+ L+ LNPY ESGK+K ++DPKGPF FSQ  EAFS++E++RA
Sbjct: 314 LTGAVTPPGFRFVVTSNGNTLKTLNPYLESGKIKPVVDPKGPFTFSQVAEAFSYIETNRA 373

Query: 301 TGKVVIHPIP 310
           TGK+VIHPIP
Sbjct: 374 TGKIVIHPIP 383

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2034802	386	AOR "alkenal/one oxidoreductas	0.996	0.800	0.690	5.8e-114
TIGR_CMR|BA_3566	332	BA_3566 "alcohol dehydrogenase	0.741	0.692	0.401	1.6e-47
TIGR_CMR|BA_3438	335	BA_3438 "alcohol dehydrogenase	0.770	0.713	0.382	2e-43
TIGR_CMR|BA_3435	317	BA_3435 "alcohol dehydrogenase	0.948	0.927	0.36	1.8e-39
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.745	0.596	0.377	5.7e-38
TIGR_CMR|CPS_0991	325	CPS_0991 "oxidoreductase, zinc	0.761	0.726	0.360	6.3e-35
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.690	0.540	0.346	5.6e-34
TAIR|locus:2086335	366	AT3G15090 [Arabidopsis thalian	0.754	0.639	0.338	1.9e-33
TIGR_CMR|BA_0176	302	BA_0176 "alcohol dehydrogenase	0.919	0.943	0.321	1.8e-32
TIGR_CMR|BA_2113	329	BA_2113 "quinone oxidoreductas	0.767	0.723	0.337	3.8e-31

TAIR|locus:2034802 AOR "alkenal/one oxidoreductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 214/310 (69%), Positives = 256/310 (82%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             MKAWVY +YG    VLK E+N+ VP ++EDQVLIKVVAAALNP+D KR  G F ATDSPL
Sbjct:    78 MKAWVYSDYGGVD-VLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSPL 136

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             PT+PGYDVAGVV KVGS VK  K GDEVY +++EKAL+ PK+ GSLAEYTAVEE LLALK
Sbjct:   137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALK 196

Query:   121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
             PKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+G    
Sbjct:   197 PKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKV 256

Query:   181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVS 240
                     L+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV+
Sbjct:   257 AATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVA 316

Query:   241 IIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA 300
             + G+VTPP   FV+TS+G +L+KLNPY ESGKVK ++DPKGPFPFS+  +AFS+LE++ A
Sbjct:   317 LTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHA 376

Query:   301 TGKVVIHPIP 310
             TGKVV++PIP
Sbjct:   377 TGKVVVYPIP 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0035798 "2-alkenal reductase (NADP+) activity" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TIGR_CMR|BA_3566 BA_3566 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 423 (154.0 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
 Identities = 100/249 (40%), Positives = 143/249 (57%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSP 59
             MKA +  +YG     +     V +P + E +VL ++ AA++NPIDFK   G         
Sbjct:     1 MKAMIIDKYGKVPMRM---AEVPIPEINEHEVLAEIHAASINPIDFKIRDGKVKMLLKYE 57

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN--GSLAEYTAVEENLL 117
             +P I G D AGV+ KVGS+V +FK+GDE+Y          P++N  G+ AEY A+ E+ +
Sbjct:    58 MPLILGNDFAGVIIKVGSKVTRFKIGDEIYA--------RPRKNKIGTFAEYIAIHEDDI 109

Query:   118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
             ALKPKNLSF EAAS+PL   T+Y+ L +       + IL+  G+GGVGT  IQLAK + G
Sbjct:   110 ALKPKNLSFEEAASIPLVGLTSYQALHDIMQLQKDQKILIHAGSGGVGTFAIQLAK-IMG 168

Query:   177 XXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKE 234
                          DL++SLGAD  I+Y  E  E++ + +D VFD +G    +K+   +K 
Sbjct:   169 ATVTTTASEAGP-DLVKSLGADQIINYKTEKFEEILKDYDAVFDTIGGTTLEKSFDIIKS 227

Query:   235 GGRVVSIIG 243
             GG +VS+ G
Sbjct:   228 GGNIVSVSG 236

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3438 BA_3438 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 377 (137.8 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
 Identities = 99/259 (38%), Positives = 141/259 (54%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             MKA +   +G+S SV + E  V  P L    VLI V A ++NPID K   GA SA     
Sbjct:     1 MKAQIIHSFGDS-SVFQLE-EVSKPKLLPGHVLIDVKATSVNPIDTKMRSGAVSAVAPEF 58

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             P I   DVAG+V +VG  V KFK GDEVYG     A    +  G+LAE+   +  L+A K
Sbjct:    59 PAILHGDVAGIVIEVGEGVSKFKCGDEVYGC----AGGFKETGGALAEFMLADARLIAHK 114

Query:   121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
             P N++  EAA+LPL   TA+E L +R+   +G+++L+ G  GGVG + IQLAK   G   
Sbjct:   115 PNNITMEEAAALPLVAITAWESLFDRANIKSGQNVLIHGATGGVGHVAIQLAKWA-GANV 173

Query:   180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK----------FDVVFDAVG--QCDK 227
                      +++   LGAD+AI+Y +E++++  ++          F+V+FD VG    D 
Sbjct:   174 FTTASQQNKMEIAHRLGADVAINYKEESVQESVQEYVQKHTNGNGFEVIFDTVGGKNLDN 233

Query:   228 ALKAVKEGGRVVSIIGSVT 246
             + +A    G VV+I    T
Sbjct:   234 SFEAAAVNGTVVTIAARST 252

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3435 BA_3435 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 117/325 (36%), Positives = 169/325 (52%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-P 59
             MKA    +YG+ +SVL+ E  ++ P L ++ VLI+V AA +NP+D+K   G      S  
Sbjct:     1 MKAIGLTQYGD-KSVLQ-EIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREGLLQDVISYD 58

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG--DINEKALDHPKRNGSLAEYTAVEENLL 117
              P + G+DVAGVV  +G  V  FKVGDEVY   DI        +RNG+ AEY AV+E  +
Sbjct:    59 FPLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDI--------ERNGTYAEYVAVDEKYV 110

Query:   118 ALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
             A KP+NLSF EAAS+PL   T+++ L + A    G  +L+  G+GG+GT  IQLAK  FG
Sbjct:   111 AKKPRNLSFEEAASIPLVGLTSWQSLVKFANVQKGNKVLIHAGSGGIGTFAIQLAKS-FG 169

Query:   177 XXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKE 234
                         +  ++ LGAD  +DY  E+   L   +++VFD +G      + K +  
Sbjct:   170 AHVATTTSTKN-MQFVKDLGADTVVDYKTEDFSLLLHNYNIVFDVLGGDVLKDSYKVLAP 228

Query:   235 GGRVVSIIG--SVTPPA----------SSFVLTS-DGSILEKLNPYFESGKVKAIIDPKG 281
              G++ SI G   +  P           S  + T  +G  L  +    E GK+K ++    
Sbjct:   229 NGKLASIYGPKGMEIPQTEISREKNIESDHIFTEPNGYELSLITELIEGGKIKPVVTHVL 288

Query:   282 PFPFSQTLEAFSHLESSRATGKVVI 306
             P       +A    ES RA GK+V+
Sbjct:   289 PLHVEGVKKAHHISESERARGKIVL 313

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 332 (121.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
 Identities = 102/270 (37%), Positives = 143/270 (52%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATD-- 57
             M AWV  +YG +  VL+F  N  +P +   ++V++KV AA LNPID   M G + A    
Sbjct:    29 MPAWVIDKYGKND-VLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDIS-MRGGYGAATMA 86

Query:    58 ---SPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGS 105
                 PL         P I G DV+G + + G  VK FK GD+V+  I       P + GS
Sbjct:    87 MKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIP------PWKQGS 140

Query:   106 LAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE------GLERSAFSAGKSILVLGG 159
             LAE+  V  N ++ KPK+L   EAAS+P    TA+       GL +   SA K +L+LGG
Sbjct:   141 LAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDN-SAKKRVLILGG 199

Query:   160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE-DLP--EKFD 216
             +GGVGT  IQ+ K  +G              L+R LGAD  +DYT   +E  L   EKFD
Sbjct:   200 SGGVGTFAIQMVK-AWGAHVTVTCSQNAER-LVRDLGADDVVDYTAGPVEKQLKNLEKFD 257

Query:   217 VVFDAVG-QCDK-ALKAVK--EGGRVVSII 242
             ++ D++G + +K AL  +K   G + V++I
Sbjct:   258 LILDSIGGETEKWALDLLKPWSGAKFVTLI 287

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

TIGR_CMR|CPS_0991 CPS_0991 "oxidoreductase, zinc-binding" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 318 (117.0 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 93/258 (36%), Positives = 134/258 (51%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
             MKA + KE G+++ V +     + P  +   ++++V A ++NPID   ML +     S  
Sbjct:     1 MKAMIIKEIGSTE-VFQLAEKAK-PVAKAGHMVVEVKATSVNPID--TMLRSIELPWSAN 56

Query:    60 LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-KALDHPKRNGSLAEYTAVEENLLA 118
             LP I   DVAG+V +VG  V  F VGDEVYG       +D     G+LAE+  V+  L+A
Sbjct:    57 LPEILHGDVAGIVCEVGEGVTGFNVGDEVYGMAGGINGVD-----GALAEFMLVDALLMA 111

Query:   119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
              KPK L+  +AA+LPL   T+YE L E+     G  +L+ G  GGVG + +QLAK V G 
Sbjct:   112 NKPKTLTMKQAAALPLVAITSYEALVEKMNVQQGDKVLIHGATGGVGHIAVQLAK-VLGA 170

Query:   178 XXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG--QCDKAL 229
                        + L ++LGAD  +DY  E++ D          FD VFD V     +K+ 
Sbjct:   171 NVTSTYSSANEV-LAKTLGADNLVDYKTESVADYVRAYTDGIGFDKVFDTVAGDNIEKSF 229

Query:   230 KAVKEGGRVVSIIGSVTP 247
             +A K  G V +I+    P
Sbjct:   230 EAAKLNGHVATILPIADP 247

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 299 (110.3 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
 Identities = 85/245 (34%), Positives = 126/245 (51%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLG----AFSA 55
             M AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A + 
Sbjct:    43 MPAWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 101

Query:    56 TDSPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
                PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct:   102 KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 155

Query:   107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAG 161
             +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct:   156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 215

Query:   162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FDVV 218
             GVGT  IQ+ K                 +L+R LGAD  IDY   ++E+  +    FD +
Sbjct:   216 GVGTFAIQVMKA--WDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 273

Query:   219 FDAVG 223
              D VG
Sbjct:   274 LDNVG 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

TAIR|locus:2086335 AT3G15090 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
 Identities = 84/248 (33%), Positives = 136/248 (54%)

Query:     2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-L 60
             +A +   +G  + V +   NV VP+L  ++VL+K  A ++NP+D +   G   +   P L
Sbjct:    33 RAVILPRFGGPE-VFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHL 91

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             P I G DV+G V  +G+ VK  KVG EV+G ++  AL      G+  +Y  + E+ L  K
Sbjct:    92 PIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTAL-----RGTYTDYGILSEDELTEK 146

Query:   121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
             P ++S VEA+++P A  TA+  L+ +A  + G+ +LV GG G VG   IQLA  V     
Sbjct:   147 PSSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLA--VASGCH 204

Query:   180 XXXXXXXXXLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDAVG--QCDK-ALKAVKEG 235
                       D + + GA+ A+DYT E+IE  +  KFD V D +G  + ++  +  +++G
Sbjct:   205 VTASCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKG 264

Query:   236 GRVVSIIG 243
             G  +++ G
Sbjct:   265 GNYMTLQG 272

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TIGR_CMR|BA_0176 BA_0176 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 103/320 (32%), Positives = 167/320 (52%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-----------PIDFKRM 49
             MKA +  +YG   +VL+ + N+E P  ++++VL+K+ A +++           P+ F   
Sbjct:     1 MKAIICTQYG-PPNVLQLQ-NIEKPIPKKNEVLVKIHATSVSTGDCRIRGFNSPLLFWIP 58

Query:    50 LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109
             +        P   I G ++AG +E +G+ V +FK GD+++  + E  L      G  AEY
Sbjct:    59 MRLILGLRKPRNPILGVELAGEIEDIGTDVTQFKKGDQIFA-LTELNL------GGYAEY 111

Query:   110 TAVEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
             T V E+ L+ LKP N+++ EAA +P    +A   L +S    G+ +L+ G +G VGT  I
Sbjct:   112 TCVHESGLITLKPTNVTYEEAAVIPFGGTSALHFLRKSRIKKGQQVLIYGASGSVGTAAI 171

Query:   169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKA 228
             QLAK+ FG             +L++SLGAD  IDYTKE+     E++D++FDAVG+  K+
Sbjct:   172 QLAKY-FGATVTAVCSNSN-FELVQSLGADKVIDYTKEDFTKRRERYDIIFDAVGKHKKS 229

Query:   229 L--KAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFS 286
             L  + +   G+ VS+ G +       V   D  +L+KL    E+  +K +ID    +   
Sbjct:   230 LCKQVLAPNGKYVSVNGMMAK-----VSKEDMILLKKLT---ETEHLKPVIDRT--YRLE 279

Query:   287 QTLEAFSHLESSRATGKVVI 306
             +  EA  ++E     G V I
Sbjct:   280 EIAEAHMYVEIGHKKGNVSI 299

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_2113 BA_2113 "quinone oxidoreductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 309 (113.8 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 88/261 (33%), Positives = 134/261 (51%)

Query:     1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             MKA V   +G S+ V+K+ T+V++P++ EDQVLI+VVA ++N  D K   G     +  L
Sbjct:     2 MKAIVVTSFGGSE-VMKY-TDVDIPAISEDQVLIRVVATSVNFADIKSRYG--KKGNKAL 57

Query:    61 PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             P I G D AG+VE+VGS VK    G  V        +  P+ NGS AEY    ENL  + 
Sbjct:    58 PFILGIDAAGIVERVGSHVKNIYPGQRV--------IAFPQ-NGSYAEYVVANENLTFVL 108

Query:   121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
             P  + F  AA+ P+ + T+Y  L   A    G+S+L+   AGG+GT  IQLAK +     
Sbjct:   109 PDEVDFQTAAACPIVSFTSYNLLANVARLQQGESVLIHAAAGGIGTTAIQLAKLLGAGTV 168

Query:   180 XXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLP--EKFDVVFDAVGQC--DKALKA 231
                       ++    GAD  I +  E+    + +L   E  DV+ D++     +++LK 
Sbjct:   169 IGTVGSEAKKEIALDAGADYVIGHQDEDFVEKVNELTNGEGVDVILDSISGTVSERSLKC 228

Query:   232 VKEGGRVVSIIGSVTPPASSF 252
             +   GR++   G+ +    +F
Sbjct:   229 LAYYGRLIHF-GNASGEIGNF 248

GO:0003960 "NADPH:quinone reductase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O42909	YBI2_SCHPO	1, ., -, ., -, ., -	0.3215	0.9548	0.8530	yes	no
Q9ZUC1	QORL_ARATH	1, ., -, ., -, ., -	0.7225	0.9967	0.8005	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_XVI000502 hypothetical protein (309 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-108
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	6e-95
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-91
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-76
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-76
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-62
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-61
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	5e-61
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-60
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-59
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-59
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-58
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	8e-54
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-52
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-50
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	7e-49
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-48
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-46
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	5e-45
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	4e-43
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	6e-42
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-41
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-41
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-40
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	6e-40
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-39
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	5e-39
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	8e-39
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	9e-38
smart00829	287	smart00829, PKS_ER, Enoylreductase	7e-37
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-36
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	5e-36
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-35
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	3e-35
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	5e-35
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	5e-34
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-32
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	5e-31
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-30
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-30
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-29
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-28
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-28
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	9e-28
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	3e-27
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-26
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-26
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-26
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-26
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-26
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	5e-26
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	2e-25
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	3e-25
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	4e-25
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-24
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	5e-24
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-23
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-22
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-22
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	4e-22
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	7e-21
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-20
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-20
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	6e-20
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	6e-20
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-19
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-18
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-18
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-18
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	4e-18
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	3e-17
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-16
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-16
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	4e-16
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	4e-16
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	4e-16
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	7e-16
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-15
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-15
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-15
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	2e-15
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-15
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	7e-15
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	4e-14
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-13
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-12
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	9e-12
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	2e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	3e-11
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	4e-11
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	2e-10
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	2e-10
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-09
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-09
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	3e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	8e-09
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	8e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-08
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-08
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	2e-08
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	7e-08
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	2e-06
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	2e-06
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-06
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-06
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	6e-06
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-06
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	5e-05
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	7e-05
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	8e-05
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	9e-05
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	2e-04
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	8e-04
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	0.002
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	0.002

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  317 bits (814), Expect = e-108
 Identities = 140/321 (43%), Positives = 173/321 (53%), Gaps = 27/321 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSP 59
           MKA    EYG    VL+   +V  P     +VL+KV AA +NP+D K   G    A    
Sbjct: 1   MKAVRIHEYGGP-EVLE-LADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLT 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           LP IPG+DVAGVV  VG  V  FKVGDEV+G           R G+ AEY  V  + LAL
Sbjct: 59  LPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFT------RGGAYAEYVVVPADELAL 112

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
           KP NLSF EAA+LPLA  TA++ L       AG+++L+ G AGGVG+  +QLAK   GA 
Sbjct: 113 KPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKA-RGA- 170

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE 234
           +V AT+S A  D LRSLGAD  IDYTK + E    P   D V D VG     ++L  VK 
Sbjct: 171 RVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP 230

Query: 235 GGRVVSIIGSVTPP---------ASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPF 285
           GGR+VSI G              A    +  DG  L +L    E+GK++ ++D    FP 
Sbjct: 231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVD--RVFPL 288

Query: 286 SQTLEAFSHLESSRATGKVVI 306
               EA   LES  A GKVV+
Sbjct: 289 EDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  283 bits (726), Expect = 6e-95
 Identities = 132/329 (40%), Positives = 178/329 (54%), Gaps = 36/329 (10%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPT 62
            VY  YG+ + +L  E  V +P+ +  +VL+KV AA++NP+D+K R          P P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPK 122
           IPG D AG V  VGS V +FKVGDEV+G +       PK  G+LAEY    E+ LA KP+
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP------PKGGGALAEYVVAPESGLAKKPE 114

Query: 123 NLSFVEAASLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVA 181
            +SF EAA+LP+A  TA + L  +     G+ +L+ G +GGVGT  +Q+AK   GA  V 
Sbjct: 115 GVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKA-LGA-HVT 172

Query: 182 ATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVVFDAVGQCD----KALKAVKE 234
              ST   +L+RSLGAD  IDYT E+   L    EK+DV+FDAVG       +A  A+K 
Sbjct: 173 GVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKP 232

Query: 235 GGRVVSIIGSVTPPASS-----------------FVLTSDGSILEKLNPYFESGKVKAII 277
           GGR VS+ G  +                      F+   +   LE+L    E GK+K +I
Sbjct: 233 GGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVI 292

Query: 278 DPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           D    +P     EA+  L+S RA GKVVI
Sbjct: 293 D--SVYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  273 bits (701), Expect = 5e-91
 Identities = 144/334 (43%), Positives = 185/334 (55%), Gaps = 38/334 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G    V +    V  P     QVL++V A+ +NP+D K   G  +A   PL
Sbjct: 1   MKALVLESFGGP-EVFE-LREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G DVAGVVE VG  V +F+VGDEVYG             GSLAEY  V+  LLALK
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALK 113

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P NLS  EAA+LPL   TA+EGL +R+A  AG+++L+ GGAGGVG + +QLAK   GA +
Sbjct: 114 PANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKA-AGA-R 171

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-----FDVVFDAVG--QCDKALKAV 232
           V AT+S+ K    RSLGAD  I Y +  +E + E      FDVVFD VG    D + +AV
Sbjct: 172 VYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAV 231

Query: 233 KEGGRVVSIIGSVT---PPAS------SFVLTSD-----------GSILEKLNPYFESGK 272
              GRVVSI+G  T    P S      S V T             G IL +     E G+
Sbjct: 232 ALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQ 291

Query: 273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           ++ ++DP+  FP  +   A + LES  A GK+VI
Sbjct: 292 LRPLLDPR-TFPLEEAAAAHARLESGSARGKIVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  236 bits (605), Expect = 3e-76
 Identities = 138/363 (38%), Positives = 182/363 (50%), Gaps = 71/363 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPID-------------F 46
           MKAW    YG   S+L  E N  +P +R+ +QVLIKV AA++NPID              
Sbjct: 1   MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNK 59

Query: 47  KRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
           KR   +   +    P   G D +GVV  +GS VK F++GDEV+G +       P   G+ 
Sbjct: 60  KRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAV------PPWSQGTH 113

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-----FSAGKSILVLGGAG 161
           AEY  V EN ++ KPKNLS  EAASLP A  TA+  L          +AGK +L+LGG+G
Sbjct: 114 AEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV 218
           GVGT  IQL K  +GA  V  T ST  + L++SLGAD  IDY  E+ E+      KFDV+
Sbjct: 174 GVGTFAIQLLKA-WGA-HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI 231

Query: 219 FDAVGQCD--KALKAVKEGGRVVSII--------------GSVTPPASSFVLTS------ 256
            D VG      ALK +K+GG  V+++              G +    S+  L        
Sbjct: 232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLK---SAVDLLKKNVKSL 288

Query: 257 -------------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 303
                         GS L++L    E GK+K +ID    FPF +  EA+  +ES  A GK
Sbjct: 289 LKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKV--FPFEEVPEAYEKVESGHARGK 346

Query: 304 VVI 306
            VI
Sbjct: 347 TVI 349

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  234 bits (600), Expect = 6e-76
 Identities = 130/338 (38%), Positives = 165/338 (48%), Gaps = 42/338 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +E+G    VLK    V  P     +VL++V AA +NPID     G       PL
Sbjct: 1   MKAVVVEEFG-GPEVLKVVE-VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG + AGVV  VGS V  FKVGD V       AL    R+G  AEY  V  + L   
Sbjct: 58  PFIPGSEAAGVVVAVGSGVTGFKVGDRVA------ALGGVGRDGGYAEYVVVPADWLVPL 111

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  LSF EAA+LPLA  TA+  L   A    G+++LV G AGGVG+  IQLAK   GA+ 
Sbjct: 112 PDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKA-LGATV 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKALKA 231
           VA  SS+ KL+LL+ LGAD  I+Y +E+  +        +  DVV D VG      +L A
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230

Query: 232 VKEGGRVVSIIGSVTPPASSFVLTS--------------------DGSILEKLNPYFESG 271
           +  GGR+VSI      P     L                          L +L     SG
Sbjct: 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASG 290

Query: 272 KVKAIIDPKGPFPFSQTLEAFSHLES-SRATGKVVIHP 308
           K+K +ID    +P ++   A +HL    R TGKVV+  
Sbjct: 291 KLKPVIDRV--YPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  200 bits (512), Expect = 1e-62
 Identities = 115/346 (33%), Positives = 166/346 (47%), Gaps = 51/346 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA  + +              +  P      +L++V A ++NP+D K   G   A    
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGG--APVPG 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLL 117
            P I G+D +GVVE VGS+V  FKVGDEVY  GDI         R GS AEY  V+E ++
Sbjct: 59  QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDIT--------RPGSNAEYQLVDERIV 110

Query: 118 ALKPKNLSFVEAASLPLATETAYEGL------ERSAFSAGKSILVLGGAGGVGTMVIQLA 171
             KPK+LSF EAA+LPL + TA+E L         A + GK++L++GGAGGVG++ IQLA
Sbjct: 111 GHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLA 170

Query: 172 KHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTK---ENIEDLP-EKFDVVF---DAVG 223
           K + G   V AT+S  + +  ++ LGAD  I++ +   E +E L  E  D +F   D   
Sbjct: 171 KQLTGL-TVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQ 229

Query: 224 QCDKALKAVKEGGRVVSIIGSVTPP------------------ASSFVLTSD----GSIL 261
             D   + +   G +  I+    P                     S   T D      IL
Sbjct: 230 HWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEIL 289

Query: 262 EKLNPYFESGKVKAIIDPK-GPFPFSQTLEAFSHLESSRATGKVVI 306
            ++    ++GK+K  +    GP       EA + LES +  GK+V+
Sbjct: 290 NEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  198 bits (505), Expect = 2e-61
 Identities = 123/354 (34%), Positives = 165/354 (46%), Gaps = 58/354 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           MKA V + +G  + VL++   +  P    D+VL++V AAALN +D + R          P
Sbjct: 1   MKAVVIRGHGGPE-VLEYGD-LPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLP 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDIN----EKALD--------------H 99
           LP I G D AGVVE VG  V   K G  V  Y  I+    E  L               H
Sbjct: 57  LPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH 116

Query: 100 PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
              +G  AEY AV    L   P NLSF EAA+ PL   TA+  L  R+    G+++LV G
Sbjct: 117 --VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHG 174

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF--- 215
              GVG+  IQ+AK  FGA+ +A   S  KL+  + LGAD  IDY KE+      +    
Sbjct: 175 AGSGVGSAAIQIAKL-FGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGK 233

Query: 216 ---DVVFDAVGQC--DKALKAVKEGGRVVSIIGSVT---PPAS-------------SFVL 254
              DVV + VG    +K+LK++  GGR+V   G+ T    P               S + 
Sbjct: 234 RGVDVVVEHVGAATWEKSLKSLARGGRLV-TCGATTGYEAPIDLRHVFWRQLSILGSTMG 292

Query: 255 TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           T     L++       GK+K +ID    FP  +  EA   LES    GK+V+ P
Sbjct: 293 TKAE--LDEALRLVFRGKLKPVIDSV--FPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  196 bits (501), Expect = 5e-61
 Identities = 115/345 (33%), Positives = 164/345 (47%), Gaps = 61/345 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V KE G  + VL+    V  P+    +VLI+V AA +N  D  +  G +     P 
Sbjct: 1   MKAIVIKEPGGPE-VLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-----PP 53

Query: 61  P----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL 116
           P     I G +VAGVV  VG  V  +KVGD V   +           G  AEY  V    
Sbjct: 54  PPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA---------GGGYAEYVVVPAGQ 104

Query: 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           L   P+ LS VEAA+LP    TA++ L +     AG+++L+ GGA GVGT  IQLAK   
Sbjct: 105 LLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKA-L 163

Query: 176 GASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CD 226
           GA +V AT+ +  KL+  R+LGAD+AI+Y  E+  +  ++       DV+ D VG     
Sbjct: 164 GA-RVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLA 222

Query: 227 KALKAVKEGGRVV----------------------SIIGSV---TPPASSFVLTSDGSIL 261
           + L+A+   GR+V                      ++ GS            L +     
Sbjct: 223 RNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAA--FR 280

Query: 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           E + P F SG+++ +ID    FP  +  EA   +ES+   GK+V+
Sbjct: 281 EHVWPLFASGRIRPVIDKV--FPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  195 bits (497), Expect = 2e-60
 Identities = 115/337 (34%), Positives = 152/337 (45%), Gaps = 47/337 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV  +   +   L  E  +E+P     +VL+KV AA LNP+D+K +     A     
Sbjct: 1   MKAWVLPK-PGAALQLTLEE-IEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA--WSY 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLLA 118
           P +PG D AGVV  VG++V  +KVGD V     +         R GS AEYT V+   + 
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL--------ARGGSFAEYTVVDARAVL 108

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P +LSF EAA+LP A  TAY+ L +     AG++IL+ GGAGGVG+  +QLAK   G 
Sbjct: 109 PLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKR-AGL 167

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPE-----KFDVVFDAVGQCDKA--L 229
            +V  T S    + ++SLGAD  IDY  E+  E + E       D V D VG    A   
Sbjct: 168 -RVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALA 226

Query: 230 KAVKEGGRVVSIIGSVTPPASSFVLTSDGSILE-KLNPYFESGKVKAIID---------- 278
             +   G +V I G           T   S+ E  L    + G   A  D          
Sbjct: 227 PTLAFNGHLVCIQGRPDAS-PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285

Query: 279 ----------PKGPFPFSQTLEAFSHLESSRATGKVV 305
                          PF Q  EA   L+     GK+V
Sbjct: 286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIV 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  192 bits (491), Expect = 1e-59
 Identities = 120/340 (35%), Positives = 158/340 (46%), Gaps = 52/340 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V KE G     L  E     P     +V I+V AA +N  D   + G +     PL
Sbjct: 1   MKAVVCKELG-GPEDLVLEEVPPEPGA-PGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG +VAGVVE VG  V  FKVGD V               G  AE   V    +   
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDRVVA-----LTGQ----GGFAEEVVVPAAAVFPL 108

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  LSF EAA+LP+   TAY  L  R+    G+++LVLG AGGVG   +QLAK   GA  
Sbjct: 109 PDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKA-LGARV 167

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDKA 228
           +AA SS  KL L R+LGAD  IDY      DL E+          DVV+D VG    + +
Sbjct: 168 IAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDVFEAS 224

Query: 229 LKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI-------------------LEKLNP 266
           L+++  GGR++ I    G +    ++ +L  + S+                   L +L  
Sbjct: 225 LRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFD 284

Query: 267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
               GK++  +     FP  Q  EA   L   +ATGKVV+
Sbjct: 285 LLAEGKIRPHVSA--VFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  192 bits (491), Expect = 3e-59
 Identities = 94/263 (35%), Positives = 126/263 (47%), Gaps = 34/263 (12%)

Query: 1   MKA-WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
            KA  +    G    V     +V VP    D+VL+KV A ALNP+D+K     F      
Sbjct: 1   QKAAVLTGPGGGLLVV----VDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI---PS 53

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P I G D AG V +VGS V +FKVGD V G ++     +  RNG+  EY   + +L A 
Sbjct: 54  YPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG-GNPNDPRNGAFQEYVVADADLTAK 112

Query: 120 KPKNLSFVEAASLPLATETAYEGL-----------ERSAFSAGKSILVLGGAGGVGTMVI 168
            P N+SF EAA+LP+   TA   L           + S  S GK +L+ GG+  VGT+ I
Sbjct: 113 IPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAI 172

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
           QLAK      KV  T+S    DL++SLGAD   DY   ++ +        K     D + 
Sbjct: 173 QLAKLAGY--KVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIS 230

Query: 224 ------QCDKALKAVKEGGRVVS 240
                  C +AL     GG++VS
Sbjct: 231 TPESAQLCAEALGRSG-GGKLVS 252

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  190 bits (485), Expect = 1e-58
 Identities = 104/335 (31%), Positives = 154/335 (45%), Gaps = 37/335 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A  Y E+G    VL+   ++ VP+    +VL++V A+ +NP+D     GA+     PL
Sbjct: 1   MRAIRYHEFGAP-DVLR-LGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAY-PGLPPL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG D AGVVE VG  V   KVGD V+       L   +R G+ AEY  V  + L   
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRVWL----TNLGWGRRQGTAAEYVVVPADQLVPL 113

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  +SF + A+L +   TAY  L   A   AG+++LV GG+G VG   +QLA+   GA  
Sbjct: 114 PDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARW-AGARV 172

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFD--AVGQCDKALKA 231
           +A  SS    +L+R  GAD   +Y  E++ D        +  DV+ +  A     K L  
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV 232

Query: 232 VKEGGRVVSIIGSVTPPASSFV--LTSDGSI----------------LEKLNPYFESGKV 273
           +  GGR+V                +  + SI                 E +      G +
Sbjct: 233 LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL 292

Query: 274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           + +I  +  +P  +   A   +ES  A GKVV+ P
Sbjct: 293 RPVIARE--YPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  182 bits (465), Expect = 2e-55
 Identities = 111/344 (32%), Positives = 155/344 (45%), Gaps = 48/344 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAW     G     LK      VP     +VL++V A +LN  D   + G +       
Sbjct: 1   MKAWRLSG-GGGLDNLKLVE-EPVPEPGPGEVLVRVHAVSLNYRDLLILNGRY-PPPVKD 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------YGDINEKALDH---PKRNGSLAE 108
           P IP  D AG V  VG  V +FKVGD V          G    +          +G LAE
Sbjct: 58  PLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAE 117

Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV 167
           Y  + E  L   P +LSF EAA+LP A  TA+  L        G ++LV  G GGV    
Sbjct: 118 YVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQ-GTGGVSLFA 176

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVV 218
           +Q AK   GA  +A +SS  KL+  ++LGAD  I+Y      D  E+          D V
Sbjct: 177 LQFAK-AAGARVIATSSSDEKLERAKALGADHVINYRTT--PDWGEEVLKLTGGRGVDHV 233

Query: 219 FDAVGQC--DKALKAVKEGGRVVSIIGSVTPPASSF----VLTSDGSI----------LE 262
            +  G     +++KAV  GG V+S+IG ++   +      +LT   ++           E
Sbjct: 234 VEVGGPGTLAQSIKAVAPGG-VISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFE 292

Query: 263 KLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            +N   E+ +++ +ID    FPF +  EA+ +LES    GKVVI
Sbjct: 293 AMNRAIEAHRIRPVID--RVFPFEEAKEAYRYLESGSHFGKVVI 334

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  176 bits (448), Expect = 8e-54
 Identities = 87/235 (37%), Positives = 116/235 (49%), Gaps = 28/235 (11%)

Query: 31  QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
           +VL++V AA L   D     G +      LP I G++ AGVV +VG  V   KVGD V  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPP-KLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV 59

Query: 91  DIN--------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
             N                 +     +G  AEY  V  + L   P  LS  EAA LP   
Sbjct: 60  LPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPL 119

Query: 137 ETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRS 194
            TAY  L R+     G ++LVL GAGGVG +  QLAK   GA +V  T  +  KL+L + 
Sbjct: 120 ATAYHALRRAGVLKPGDTVLVL-GAGGVGLLAAQLAKA-AGA-RVIVTDRSDEKLELAKE 176

Query: 195 LGADLAIDYTKENIEDL-----PEKFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
           LGAD  IDY +E++E+          DVV DAVG  +   +AL+ ++ GGR+V +
Sbjct: 177 LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV 231

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  174 bits (444), Expect = 2e-52
 Identities = 108/345 (31%), Positives = 156/345 (45%), Gaps = 52/345 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V K++G    +      V VP     +VLIKV A  +   D     G +      L
Sbjct: 4   MKAAVLKKFGQPLEI----EEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDW--PVPKL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------Y---GDINEKALDHPK--- 101
           P IPG+++ G V +VG  V   KVGD V             Y   G  NE    + K   
Sbjct: 58  PLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSG--NENLCPNQKITG 115

Query: 102 --RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
              +G  AEY  V    +   P+ L   EAA L  A  T Y  L+++    GK + V+ G
Sbjct: 116 YTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVV-G 174

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVV 218
           AGG+G M +Q AK   GA  +A T S  KL+L + LGAD  I+ +  + +E + E  D +
Sbjct: 175 AGGLGHMAVQYAK-AMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAI 233

Query: 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSV----TPPASSFVLTSD-----GSI------L 261
            D VG    + +LKA++ GG +V ++G       P   +F+L        GS+      L
Sbjct: 234 IDTVGPATLEPSLKALRRGGTLV-LVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL 292

Query: 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           E+   +   GK+K  I      P  +  EA+  +E  +  G+ VI
Sbjct: 293 EEALDFAAEGKIKPEILET--IPLDEINEAYERMEKGKVRGRAVI 335

Length = 339

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  169 bits (431), Expect = 2e-50
 Identities = 110/354 (31%), Positives = 158/354 (44%), Gaps = 65/354 (18%)

Query: 9   YGNSQSVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG 65
           + N+ S L   T +++P     +++++++KV AAALNP+D K               + G
Sbjct: 6   FKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGL-G 63

Query: 66  YDVAGVVEKVGSQVKK-FKVGDEVYGDINEKALDHP-KRNGSLAEY----TAVEENLLAL 119
            D +GV+ KVGS V   +KVGDEV G        HP    G+L++Y       ++  +  
Sbjct: 64  RDYSGVIVKVGSNVASEWKVGDEVCG-----IYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 120 KPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
           KP+N+S  EAA+ PL   TAY+ LE           +LVLGG+  VG   IQLAK+ +  
Sbjct: 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNI 178

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----------PEKFDVVFDAVG---- 223
             V  T S+   +L + LGAD  IDY   +   L            KFD++ D VG    
Sbjct: 179 GTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL 238

Query: 224 --QCDKALKAVKEGGRVVSIIG-----------SVTPPASSFV----------------- 253
               +  LK   + G  V+I+G           +     S+                   
Sbjct: 239 FPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF 298

Query: 254 -LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            L  +   +EK       GKVK  ID    +PF    EAF  L+S+RA GKVVI
Sbjct: 299 LLDPNADWIEKCAELIADGKVKPPIDSV--YPFEDYKEAFERLKSNRAKGKVVI 350

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  165 bits (420), Expect = 7e-49
 Identities = 111/341 (32%), Positives = 160/341 (46%), Gaps = 46/341 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID--FKRMLGAFSATDS 58
           M+A  + ++G    VL+ E  + VP+    +VLI+V A  LN  D  F+R  GA+     
Sbjct: 1   MRAVRFHQFGGP-EVLRIEE-LPVPAPGAGEVLIRVEAIGLNRADAMFRR--GAYIE-PP 55

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           PLP   GY+ AGVVE VG+ V  F VGD V    +        + G+ AEY  V    + 
Sbjct: 56  PLPARLGYEAAGVVEAVGAGVTGFAVGDRV----SVIPAADLGQYGTYAEYALVPAAAVV 111

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P  LSFVEAA+L +   TAY  L   A    G S+L+   +  VG   IQ+A    GA
Sbjct: 112 KLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAA-GA 170

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKAL 229
           + +A T ++ K D L +LGA   I   +E++     +       DVVFD VG  Q  K  
Sbjct: 171 TVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA 230

Query: 230 KAVKEGGRVVSIIGSVTPPASSFVL------------------TSDGSILEK----LNPY 267
            A+  GG +V + G+++   + F L                  T D     +    +   
Sbjct: 231 DALAPGGTLV-VYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDG 289

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             SG +K ++D    FPF   +EA  +LES +  GK+V+ P
Sbjct: 290 LASGALKPVVDRV--FPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  164 bits (417), Expect = 1e-48
 Identities = 113/342 (33%), Positives = 159/342 (46%), Gaps = 55/342 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA    E G  + VL     V +P  +  +VLI+V AA +N  D  +  G +     P 
Sbjct: 1   MKAIEITEPGGPE-VLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-----PP 53

Query: 61  P----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL 116
           P     I G +VAG V  VG  V ++KVGD V   +           G  AEY AV    
Sbjct: 54  PPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA---------GGGYAEYVAVPAGQ 104

Query: 117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           +   P+ LS VEAA+LP    T +  L +R    AG+++L+ GGA G+GT  IQLAK  F
Sbjct: 105 VLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAK-AF 163

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEK-----FDVVFDAVGQ--CDK 227
           GA       S  K     +LGAD+AI+Y +E+ +E +  +      DV+ D VG    ++
Sbjct: 164 GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNR 223

Query: 228 ALKAVKEGGRVVSI--IGSVT-----PPASSFVLTSDGSIL----------------EKL 264
            +KA+   GR+V I   G         P  +  LT  GS L                E +
Sbjct: 224 NIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV 283

Query: 265 NPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            P   SG+V+ +ID    FP     +A + +ES    GK+V+
Sbjct: 284 WPLLASGRVRPVIDKV--FPLEDAAQAHALMESGDHIGKIVL 323

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  158 bits (403), Expect = 2e-46
 Identities = 109/343 (31%), Positives = 152/343 (44%), Gaps = 59/343 (17%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KA    + G    VL++E  V VP     +VL++  A  +N ID     G +     PLP
Sbjct: 1   KAVRIHKTGGP-EVLEYED-VPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLP 55

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
            + G + AGVVE VG  V  FKVGD V Y              G+ AEY  V  + L   
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGP----------PGAYAEYRVVPASRLVKL 105

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFS--AGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
           P  +S   AA+L L   TA+  L R  +    G ++LV   AGGVG ++ Q AK   GA+
Sbjct: 106 PDGISDETAAALLLQGLTAH-YLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKA-LGAT 163

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQ--CDK 227
            +   SS  K +L R+ GAD  I+Y     ED  E+          DVV+D VG+   + 
Sbjct: 164 VIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDTFEG 220

Query: 228 ALKAVKEGGRVVSI--IGSVTPPASSFVLTSDGSIL---EKLNPY--------------- 267
           +L +++  G +VS        PP     L S GS+      L  Y               
Sbjct: 221 SLDSLRPRGTLVSFGNASGPVPPFDLLRL-SKGSLFLTRPSLFHYIATREELLARAAELF 279

Query: 268 --FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
               SGK+K  I     +P +   +A   LES + TGK+++ P
Sbjct: 280 DAVASGKLKVEIG--KRYPLADAAQAHRDLESRKTTGKLLLIP 320

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  155 bits (395), Expect = 5e-45
 Identities = 111/354 (31%), Positives = 155/354 (43%), Gaps = 64/354 (18%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSPL 60
           +A V   +G     LK E    +P     +V ++V A  LN  D   R  G + +     
Sbjct: 1   RAVVLTGFG-GLDKLKVEKE-ALPEPSSGEVRVRVEACGLNFADLMARQ-GLYDSA-PKP 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG++ AG VE VG  VK FKVGD V G      L    R G  AE   V  + +   
Sbjct: 57  PFVPGFECAGTVEAVGEGVKDFKVGDRVMG------LT---RFGGYAEVVNVPADQVFPL 107

Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  +SF EAA+ P+   TAY  L        G+S+LV   AGGVG    QL K V   + 
Sbjct: 108 PDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVT- 166

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQCD--KALKAV 232
           V  T+S +K + L+  G    IDY  ++  +      PE  D+V DA+G  D  K+   +
Sbjct: 167 VVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL 226

Query: 233 KEGGRVVSIIGS---VTPPASSFV----------------LTSD---------------- 257
           K  GR+V + G+   VT    S+                 L S+                
Sbjct: 227 KPMGRLV-VYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEER 285

Query: 258 ---GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                +++KL   +E GK+K  ID    FPF +  EA   L+S +  GKVV+ P
Sbjct: 286 ELLTEVMDKLLKLYEEGKIKPKIDSV--FPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (381), Expect = 4e-43
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 45/341 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA +          L+ E  V  P     +VLIKV AA +   D     G F       
Sbjct: 1   MKAAILH---KPNKPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE------------------KALDHPKR 102
           P I G+++ G VE+VG  V++FK GD V                        +A    + 
Sbjct: 55  PLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEV 114

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEY  V E  L   P N+S   AA       TA   L+R+    G ++LV G  GG
Sbjct: 115 DGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGG 174

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA 221
           VG   IQLAK   GA  +A T S  KL +L+ LGAD  ID +K + +       DVV + 
Sbjct: 175 VGIHAIQLAK-ALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIEL 233

Query: 222 VG--QCDKALKAVKEGGRVVSIIGSVTP------PASSFV--LTSDGSI------LEKLN 265
           VG    +++L+++ +GGR+V +IG+VTP      P    +  +   GSI      +E+  
Sbjct: 234 VGSPTIEESLRSLNKGGRLV-LIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEAL 292

Query: 266 PYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
              + GK+K +ID           EA   L+S +  G++V+
Sbjct: 293 KLVKEGKIKPVIDRV--VSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  147 bits (374), Expect = 6e-42
 Identities = 102/356 (28%), Positives = 150/356 (42%), Gaps = 54/356 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A +   +G     L +  +V VP+    +VLI+V A  +N  D     G +S      
Sbjct: 1   MRAVLLTGHGGLD-KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGA 59

Query: 60  -----------------LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK- 101
                             P I G D+ G V  VG  V   ++G+ V  D + +       
Sbjct: 60  TDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDP 119

Query: 102 ---------RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK 152
                    R+G  AEYT V           LS VE A+ P +  TA   LER+   AG+
Sbjct: 120 ADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGE 179

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL- 211
           ++LV G +GGVG+ ++QLAK       V A +  AK + +R+LGAD  I      + D  
Sbjct: 180 TVLVTGASGGVGSALVQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPLLADAK 237

Query: 212 ---PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVTPPASSF--------VLTSDG 258
               E  DVV D VG       L+ ++ GGR V   G++  P             LT  G
Sbjct: 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYV-TAGAIAGPVVELDLRTLYLKDLTLFG 296

Query: 259 S------ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           S      +  +L  Y E G+++ ++     FP S+  EA +     R  GK+V+ P
Sbjct: 297 STLGTREVFRRLVRYIEEGEIRPVVA--KTFPLSEIREAQAEFLEKRHVGKLVLVP 350

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  146 bits (372), Expect = 1e-41
 Identities = 120/356 (33%), Positives = 159/356 (44%), Gaps = 71/356 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA VY+  G        E   V VP    D+VLIKV A  +   D     G F A    
Sbjct: 1   MKALVYEGPGE------LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--- 51

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-------------------KALDHP 100
            P +PG++ AGVV  VGS+V  FKVGD V  D N                     A+   
Sbjct: 52  PPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV- 110

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGG 159
            RNG  AEY  V    +   P NLSF EAA   PL+   A  GL+      G S+LV G 
Sbjct: 111 TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC--AVHGLDLLGIKPGDSVLVFG- 167

Query: 160 AGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLLRSLGADLAIDYTKENI----EDLPEK 214
           AG +G ++ QL K   GAS+V  A  +  KL+L + LGA   +D ++E+     ED P  
Sbjct: 168 AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYG 226

Query: 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFV----------LTSDGSIL 261
           FDVV +A G     ++A++  + GG V+  +  V  P +             LT  GS  
Sbjct: 227 FDVVIEATGVPKTLEQAIEYARRGGTVL--VFGVYAPDARVSISPFEIFQKELTIIGSF- 283

Query: 262 EKLNPY--------FESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
             +NPY         ESGK  VK ++  +   P  +  EA   +  S    KVV+ 
Sbjct: 284 --INPYTFPRAIALLESGKIDVKGLVSHR--LPLEEVPEALEGMR-SGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  145 bits (369), Expect = 1e-41
 Identities = 94/311 (30%), Positives = 139/311 (44%), Gaps = 52/311 (16%)

Query: 30  DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY 89
           D+V ++V AA LN  D    LG     ++PL    G + +G+V +VGS V   KVGD V 
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETPL----GLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 90  GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-F 148
           G             G+ A +  V+  L+   P +LSF EAA+LP+A  TAY  L   A  
Sbjct: 57  GLA----------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLA------I 201
             G+S+L+   AGGVG   IQLA+H+ GA +V AT  S  K + LR LG  +        
Sbjct: 107 QKGESVLIHAAAGGVGQAAIQLAQHL-GA-EVFATVGSEEKREFLRELGGPVDHIFSSRD 164

Query: 202 DYTKENIEDL--PEKFDVVFDAVG--QCDKALKAVKEGGRVVSI----IGSVTPPA---- 249
               + I         DVV +++       + + +   GR V I    I S +       
Sbjct: 165 LSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPF 224

Query: 250 ------SSFVLTSD--------GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHL 295
                 SS  L             +L ++    E+G +K +  P    P +  ++AF  +
Sbjct: 225 LRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLM 282

Query: 296 ESSRATGKVVI 306
           +S +  GKVV+
Sbjct: 283 QSGKHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  143 bits (363), Expect = 1e-40
 Identities = 104/338 (30%), Positives = 162/338 (47%), Gaps = 48/338 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V+++ G     LK E +V+ P     +VLI+V  A +NP+D+  ++ A      P+
Sbjct: 1   MKALVFEKSGIEN--LKVE-DVKDPKPGPGEVLIRVKMAGVNPVDY-NVINAVKV--KPM 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPKR----- 102
           P IPG + AGVVE+VG  VK  K GD V  Y  +           NE    +        
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVS 114

Query: 103 NGSLAEYTAVEE-NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
           NG  AEY  V E NL  + P ++S   AASLP+A  TAY  L+ +    G++++V G +G
Sbjct: 115 NGGYAEYIVVPEKNLFKI-PDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVF 219
             G   +QLAK + GA +V A S     D L+  GAD  +DY +  E ++++ +  DVV 
Sbjct: 174 NTGIFAVQLAK-MMGA-EVIAVSRK---DWLKEFGADEVVDYDEVEEKVKEITKMADVVI 228

Query: 220 DAVGQC--DKALKAVKEGGRVVSI-----------IGSVTPPASSFVLTSDGSILEKLNP 266
           +++G    D +L  +  GGR+V+            +  +     S + ++ G+  E L  
Sbjct: 229 NSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLEL 288

Query: 267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 304
              +  +K  +     F   +  EA   L S    G++
Sbjct: 289 VKIAKDLKVKVWKT--FKLEEAKEALKELFSKERDGRI 324

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  142 bits (360), Expect = 6e-40
 Identities = 103/348 (29%), Positives = 151/348 (43%), Gaps = 48/348 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSP 59
           MKA    EYG     L+ E  V VP     QVL++V  A +   D   + G +       
Sbjct: 1   MKAARLYEYG---KPLRLED-VPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYK 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPKR---- 102
           LP   G++ AG VE+VGS V   K GD V  +               E   ++ +     
Sbjct: 57  LPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG 116

Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA--FSAGKSILVLGG 159
            +G  AEY  V    L   P+ L  VEAA L  A  TAY  ++++      G +++V+ G
Sbjct: 117 TDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVI-G 175

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-----K 214
            GG+G + +Q+ + +  A+ +A   S   L L   LGAD  ++ + + +E++ E      
Sbjct: 176 VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRG 235

Query: 215 FDVVFDAVG---QCDKALKAVKEGGR--VVSIIGSVTPPAS-------SFVLTSDGSI-- 260
            D V D VG       A K + +GGR  +V   G    P S       S + +  G+   
Sbjct: 236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAE 295

Query: 261 LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           L ++    ESGKVK  I     FP     EA   L   R TG+ V+ P
Sbjct: 296 LVEVVALAESGKVKVEIT---KFPLEDANEALDRLREGRVTGRAVLVP 340

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  140 bits (355), Expect = 1e-39
 Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 41/314 (13%)

Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           EV      +V I+V A +LN  D   + G +  T  P P  PG++ +GVV  VG  V + 
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP-TMPPYPFTPGFEASGVVRAVGPHVTRL 59

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142
            VGDEV     E         G  A    V E+ +  KP +LSF EA +LP+   T  + 
Sbjct: 60  AVGDEVIAGTGE-------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA 112

Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID 202
             R+  + G+ IL+    GG G M +QLA+   GA   A  SS  KL+ L+ LG    I+
Sbjct: 113 FARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATASSDDKLEYLKQLGVPHVIN 171

Query: 203 YTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVVSIIGSVTPPASSFVL 254
           Y +E+ E+   +       DVV + +      K L  +  GGR V I  +    A S  L
Sbjct: 172 YVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDL 231

Query: 255 TS----------------------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAF 292
           +                             ++    E G+++  +     FPF    EA+
Sbjct: 232 SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRI--FPFDDIGEAY 289

Query: 293 SHLESSRATGKVVI 306
            +L      GKVV+
Sbjct: 290 RYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  139 bits (353), Expect = 5e-39
 Identities = 99/352 (28%), Positives = 153/352 (43%), Gaps = 73/352 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A   K +G    VLK       P+ + + VLIKV AA +N  D  +  G +       
Sbjct: 2   MRAVTLKGFGGVD-VLKIGE-SPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSS 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             I G +VAG VE VGS VK+FK GD V   +           G  AEY    +  +   
Sbjct: 60  E-ILGLEVAGYVEDVGSDVKRFKEGDRVMALL---------PGGGYAEYAVAHKGHVMHI 109

Query: 121 PKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+  +F EAA++P A  TA++ L++      G+S+L+  GA GVGT   QLA+  +GA+ 
Sbjct: 110 PQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEK-YGAAT 168

Query: 180 VAATSSTAKLDLLRSLGADLAIDY-----TKENIEDL--PEKFDVVFDAVGQC--DKALK 230
           +  TSS  K+D  + L A + I Y         ++ L   +  ++V D VG     +  +
Sbjct: 169 IITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE 228

Query: 231 AVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLN------------------------- 265
            +   G+ + + G +            G+ +EK N                         
Sbjct: 229 VLAVDGKWI-VYGFMG-----------GAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKA 276

Query: 266 -----------PYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                      PY E G++K I+D    +P  +  EA + LE ++  GKVV+
Sbjct: 277 DLVASFEREVLPYMEEGEIKPIVDRT--YPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  139 bits (352), Expect = 8e-39
 Identities = 82/268 (30%), Positives = 129/268 (48%), Gaps = 42/268 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V    G+    L++E ++  P     +VL+KV A  +   D  R LG  +      
Sbjct: 1   MKALVLTGPGD----LRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY---HP 52

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKAL-DH-----PKR 102
           P + G++ +G VE+VGS V    VGD V            Y    E +L  +      +R
Sbjct: 53  PLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR 112

Query: 103 NGSLAEYTAV-EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGA 160
           +G+ AEY +V   NL+ + P ++ + EAA + P A   A   +  +  + G +++V+ GA
Sbjct: 113 DGAFAEYVSVPARNLIKI-PDHVDYEEAAMIEPAA--VALHAVRLAGITLGDTVVVI-GA 168

Query: 161 GGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEK----- 214
           G +G + IQ  K   GA +V A      KL + R LGAD  I+  +E++E + E      
Sbjct: 169 GTIGLLAIQWLKI-LGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG 227

Query: 215 FDVVFDAVGQCD---KALKAVKEGGRVV 239
            D+V +A G      +AL   + GG+VV
Sbjct: 228 ADLVIEAAGSPATIEQALALARPGGKVV 255

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score =  136 bits (344), Expect = 9e-38
 Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 18/196 (9%)

Query: 18  FETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS 77
            + ++  P      +L++V A ++NP+D K  + A  A ++  P I G+D AGVV  VG 
Sbjct: 18  VDIDLPKPKPGGRDLLVEVKAISVNPVDTK--VRARMAPEAGQPKILGWDAAGVVVAVGD 75

Query: 78  QVKKFKVGDEVY--GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA 135
           +V  FK GDEV+  GDI+        R GS AE+  V+E ++  KPK+LSF EAA+LPL 
Sbjct: 76  EVTLFKPGDEVWYAGDID--------RPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLT 127

Query: 136 TETAYE------GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL 189
           + TA+E      G+        +++L++GGAGGVG+++IQLA+ + G + +A  S     
Sbjct: 128 SITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQ 187

Query: 190 DLLRSLGADLAIDYTK 205
           + +  LGA   ID++K
Sbjct: 188 EWVLELGAHHVIDHSK 203

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  132 bits (336), Expect = 7e-37
 Identities = 88/315 (27%), Positives = 133/315 (42%), Gaps = 70/315 (22%)

Query: 34  IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN 93
           I+V AA LN   F+ +L A            G + AGVV +VG  V    VGD V G   
Sbjct: 1   IEVRAAGLN---FRDVLIALGLYPGEAV--LGGECAGVVTRVGPGVTGLAVGDRVMGLAP 55

Query: 94  EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGK 152
                     G+ A     +  L+   P   SF EAA++P+   TAY  L + +    G+
Sbjct: 56  ----------GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGE 105

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI--- 208
           S+L+   AGGVG   IQLA+H+ GA +V AT  S  K D LR+LG         ++I   
Sbjct: 106 SVLIHAAAGGVGQAAIQLARHL-GA-EVFATAGSPEKRDFLRALGIP------DDHIFSS 157

Query: 209 ------EDLPEK-----FDVVF-----DAVGQCDKALKAVKEGGRVVSI----IGSVTPP 248
                 +++         DVV      + +   D +L+ +  GGR V I    I   +  
Sbjct: 158 RDLSFADEILRATGGRGVDVVLNSLSGEFL---DASLRCLAPGGRFVEIGKRDIRDNSQL 214

Query: 249 A----------SSFVLTSD-------GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291
           A           +  L +          +L ++   F  G ++ +  P   FP S   +A
Sbjct: 215 AMAPFRPNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDAEDA 272

Query: 292 FSHLESSRATGKVVI 306
           F +++  +  GKVV+
Sbjct: 273 FRYMQQGKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score =  133 bits (337), Expect = 3e-36
 Identities = 92/302 (30%), Positives = 132/302 (43%), Gaps = 45/302 (14%)

Query: 1   MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN----------PIDFKR 48
           M A+  +E   G+ +  ++ E  V VP L   +VL+ V+AA +N          P+    
Sbjct: 8   MYAFAIREERDGDPRQAIQLEV-VPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFA 66

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN----- 103
            L  +   D P   I G D +GVV +VG  V ++KVGDEV     +  L  P        
Sbjct: 67  FLRKYGKLDLPF-HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPM 125

Query: 104 --------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERS 146
                         GS AE+  V++  L  KPK+L++ EAA   L   TAY  L     +
Sbjct: 126 LSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPA 185

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE 206
           A   G ++L+ G AGG+G+   QLA+   G + VA  SS  K +  RSLGA+  ID    
Sbjct: 186 AVKPGDNVLIWGAAGGLGSYATQLAR-AGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDF 244

Query: 207 NIED-LPEKFDVVFDAVGQCDKAL-KAVKE--GGRVVSII----GSVTPPASSFVLTSDG 258
                LP+          +  K   K ++E  GG    I+    G  T P S +V    G
Sbjct: 245 GHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGG 304

Query: 259 SI 260
            +
Sbjct: 305 MV 306

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  131 bits (333), Expect = 5e-36
 Identities = 98/349 (28%), Positives = 151/349 (43%), Gaps = 53/349 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +E+G     +K   +V VP     +VL+K+ A+ +   D    LG +      L
Sbjct: 1   MKAAVVEEFGEKPYEVK---DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDW-PVKPKL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----YG---------DINEKALDHPK----- 101
           P I G++ AGVV  VG  V   KVGD V     Y            +E    + K     
Sbjct: 57  PLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYT 116

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G+ AEY   +   +   P  LSF +AA L  A  T Y+ L+++    G  +++ G  G
Sbjct: 117 VDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGG 176

Query: 162 GVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRSLGADLAIDYTKENIEDLPEKFD---- 216
           G+G + +Q AK +    +V A      KL+L + LGAD  +D+ K +  +  ++      
Sbjct: 177 GLGHLGVQYAKAMGL--RVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGG 234

Query: 217 ---VVFDAVGQC--DKALKAVKEGGRVVSIIG---SVTPPASSFVLTSD-----GSI--- 260
              VV  AV     ++AL  ++ GG +V  +G       P   F L        GS+   
Sbjct: 235 AHAVVVTAVSAAAYEQALDYLRPGGTLV-CVGLPPGGFIPLDPFDLVLRGITIVGSLVGT 293

Query: 261 ---LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
              L++   +   GKVK  I      P     E F  +E  +  G+VV+
Sbjct: 294 RQDLQEALEFAARGKVKPHIQ---VVPLEDLNEVFEKMEEGKIAGRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 1e-35
 Identities = 101/347 (29%), Positives = 156/347 (44%), Gaps = 53/347 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA +   +     +      V  P   +D+V+IKV  A L   D  ++ G +       
Sbjct: 1   MKAVILPGFKQGYRI----EEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR--MKY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKALDHPKR------ 102
           P I G++V G VE+VG  VK FK GD V            Y    E+A    +       
Sbjct: 55  PVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEEL 114

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAG 161
           +G  AEY  V+   L   P N+S  E A + P  T   Y GL R+    G+++LV G  G
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVSD-EGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGG 173

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVF 219
           GVG   IQ+AK   GA  +A TSS +K  ++    AD  I  +K  E ++ +    D+V 
Sbjct: 174 GVGIHAIQVAK-ALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKIGGA-DIVI 230

Query: 220 DAVG--QCDKALKAVKEGGRVVSIIGSVTP-PASS----FVLTSDGSIL----------- 261
           + VG    +++L+++  GG+++  IG+V P P  S    +++  D  I+           
Sbjct: 231 ETVGTPTLEESLRSLNMGGKII-QIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVE 289

Query: 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           E L      GK+K +I        S+  +A   L+     GK+++ P
Sbjct: 290 EALK-LVAEGKIKPVI--GAEVSLSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  129 bits (326), Expect = 3e-35
 Identities = 88/323 (27%), Positives = 129/323 (39%), Gaps = 43/323 (13%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
             V VP     +VLIK+ A  +   D     G +    S  P +PG+++ G V +VG+ V
Sbjct: 15  EEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG--SKYPLVPGHEIVGEVVEVGAGV 72

Query: 80  KKFKVGDEV-----YG---------DINEKALDHPK-----RNGSLAEYTAVEENLLALK 120
           +  KVGD V      G            E              G  AEY   +     L 
Sbjct: 73  EGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL 132

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P  L   +AA L  A  T Y  L  +    G+ + VL G GG+G + +Q A+   G   V
Sbjct: 133 PDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVL-GIGGLGHLAVQYARA-MGFETV 190

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFD---AVGQCDKALKAVKEGG 236
           A T S  K +L R LGAD  +D   E  E       DV+     +    + AL  ++ GG
Sbjct: 191 AITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGG 250

Query: 237 RVVSI----IGSVTPPASSFVLTSD---GSI------LEKLNPYFESGKVKAIIDPKGPF 283
           R+V +        +P     ++      GS       L++   +   GKVK +I+    F
Sbjct: 251 RIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIE---TF 307

Query: 284 PFSQTLEAFSHLESSRATGKVVI 306
           P  Q  EA+  +E      + V+
Sbjct: 308 PLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score =  130 bits (329), Expect = 5e-35
 Identities = 89/306 (29%), Positives = 130/306 (42%), Gaps = 53/306 (17%)

Query: 1   MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN----------PIDFKR 48
           M A+  +   YG+    ++ E  V VP L   +VL+ V+AA +N          P+    
Sbjct: 13  MYAFAIRPERYGDPAQAIQLED-VPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVS--- 68

Query: 49  MLGAFSATDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN---- 103
              A        P  I G D +G+V  VG  VK +KVGDEV    +    + P+R     
Sbjct: 69  TFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDP 128

Query: 104 ---------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA- 147
                          GS A++  V+   L  KPK+LS+ EAA+  L   TAY  L     
Sbjct: 129 MFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNP 188

Query: 148 --FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK 205
                G ++L+ G +GG+G+M IQLA+   GA+ VA  SS  K +  R+LGA+  I+   
Sbjct: 189 NTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRD 247

Query: 206 ENIEDLPEKFDVVFDAVGQCDKALKAVKE-------GGRVVSII----GSVTPPASSFVL 254
            +   +    DV  +A     K  +   +       G     I+    G  T P S FV 
Sbjct: 248 FDHWGVLP--DVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVC 305

Query: 255 TSDGSI 260
              G +
Sbjct: 306 DRGGMV 311

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  126 bits (319), Expect = 5e-34
 Identities = 96/346 (27%), Positives = 141/346 (40%), Gaps = 46/346 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAW +         L     V VP     +VL+KV AA +   D   + G    T + L
Sbjct: 1   MKAWRFH---KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGG-VPTLTKL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP------------------KR 102
           P   G+++AG V +VG+ V  FKVGD V                                
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGI 116

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEY  V    L   P  + F +AA    A  T Y  + R+        +++ G GG
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-----YTKENIEDLPEKFDV 217
           +G   +Q+AK   GA+ +A      KL+L + LGAD  ++        +    L   FDV
Sbjct: 177 LGLNAVQIAKA-MGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV 235

Query: 218 VFDAVGQ---CDKALKAVKEGGRVVSI-IGS--VTPPASSF------VLTSDGSILEKLN 265
           +FD VG     + A KAVK GGR+V + +G   +T   S        ++ S G   E L 
Sbjct: 236 IFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLP 295

Query: 266 PYFE---SGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
              +    GK+   ++     P  +  E    L   +  G+VV+ P
Sbjct: 296 EVLDLIAKGKLDPQVE---TRPLDEIPEVLERLHKGKVKGRVVLVP 338

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  121 bits (307), Expect = 2e-32
 Identities = 93/331 (28%), Positives = 138/331 (41%), Gaps = 64/331 (19%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
             ++P     +V++KV A+ ++  D +   G +     PLP  PGYD+ G V+ +GS V 
Sbjct: 19  EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVT 77

Query: 81  KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
            F+VGD V       AL    R G  AEY  ++   L   P+ +   EA  L L   TAY
Sbjct: 78  GFEVGDRV------AAL---TRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAY 128

Query: 141 EGLERSAFS-AGKSILVLGGAGGVGTMVIQLAK----HVFGASKVAATSSTAKLDLLRSL 195
           + L R+A    G+ +L+ G +GGVG  +++LA      V+G      T+S      LR L
Sbjct: 129 QMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYG------TASERNHAALREL 182

Query: 196 GADLAIDYTKENIED---LPEKFDVVFDAVGQCDKA--LKAVKEGGRVVSIIGSVT---- 246
           GA   IDY  ++       P   DVVFD VG         A+  GG +V   G+ +    
Sbjct: 183 GA-TPIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQG 241

Query: 247 ---PPASSFVLT------------------SDGSILEKLNPYFE----------SGKVKA 275
                A   +L                         E    + +           GK++ 
Sbjct: 242 RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP 301

Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            I  +   P S+  EA   LES +  GK+V+
Sbjct: 302 KIAKR--LPLSEVAEAHRLLESGKVVGKIVL 330

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  118 bits (297), Expect = 5e-31
 Identities = 98/338 (28%), Positives = 144/338 (42%), Gaps = 44/338 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A    E+G    VL  E  V  P     QV I V AA ++ +D +   G       P 
Sbjct: 1   MRAIRLHEFGPP-EVLVPED-VPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPE 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           LP +PG +VAGVV+ VG  V    +G  V            +  G  AE    + + L  
Sbjct: 59  LPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAH-------TGRAGGGYAELAVADVDSLHP 111

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
            P  L    A ++     TA   L+ +  + G  +LV   AGG+G++++QLAK   GA+ 
Sbjct: 112 VPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAA-GATV 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQC--DKA 228
           V A    AK  L+R+LGAD+A+DYT+    D P++           VV D VG      A
Sbjct: 171 VGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAIGRAA 227

Query: 229 LKAVKEGGRVVSI---IGSVTPPASSFVLTSDG-SILEKLNPYFESGKVKAIIDP----- 279
           L  +  GGR ++     G  T           G +++  L    E G ++A+        
Sbjct: 228 LALLAPGGRFLTYGWASGEWTALDED-DARRRGVTVVGLLGVQAERGGLRALEARALAEA 286

Query: 280 ---------KGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                       FP  +  EA + LE+    GKV++ P
Sbjct: 287 AAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  117 bits (295), Expect = 1e-30
 Identities = 109/366 (29%), Positives = 154/366 (42%), Gaps = 82/366 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   +G +   L+    V VP     +VL+KV A  +   D K++ G    TD   
Sbjct: 1   MKAAVL--HGPNDVRLE---EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH--TDLKP 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------------NEKALDHPK 101
           P I G+++AG + +VG  V  FKVGD V+                      N K   +  
Sbjct: 54  PRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY 113

Query: 102 RNGSLAEYTAV------EENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSI 154
            +G  AEY  V         +L L P N+SF EAA   PLA         ++    G ++
Sbjct: 114 -DGGFAEYVRVPAWAVKRGGVLKL-PDNVSFEEAALVEPLAC--CINAQRKAGIKPGDTV 169

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPE 213
           LV+G AG +G +   LAK   GA KV  +  +  +L+  + LGAD  ID  +   EDL E
Sbjct: 170 LVIG-AGPIGLLHAMLAKA-SGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVE 224

Query: 214 K---------FDVVFDAVG----QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDG-- 258
           K          DVV  A G    Q   AL+ V++GGR++       P  S+  +  +   
Sbjct: 225 KVRELTDGRGADVVIVATGSPEAQAQ-ALELVRKGGRIL--FFGGLPKGSTVNIDPNLIH 281

Query: 259 ----SIL-----------EKLNPYFESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRAT 301
               +I            E L     SGK  VK +I  +  FP     EAF      ++ 
Sbjct: 282 YREITITGSYAASPEDYKEALE-LIASGKIDVKDLITHR--FPLEDIEEAFELAADGKSL 338

Query: 302 GKVVIH 307
            K+VI 
Sbjct: 339 -KIVIT 343

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  116 bits (293), Expect = 2e-30
 Identities = 87/340 (25%), Positives = 141/340 (41%), Gaps = 55/340 (16%)

Query: 5   VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP 64
           VY ++G    ++    ++ +P     +VL++++AA +NP D   + GA+ +   PLP +P
Sbjct: 2   VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR-PPLPAVP 60

Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR-NGSLAEYTAVEENLLALKPKN 123
           G +  GVV +VGS V    VG  V           P    G+  EY     + L   P +
Sbjct: 61  GNEGVGVVVEVGSGVSGLLVGQRVL----------PLGGEGTWQEYVVAPADDLIPVPDS 110

Query: 124 LSFVEAASL---PLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           +S  +AA L   PL   TA+  L E      G  ++       VG M+IQLAK   G   
Sbjct: 111 ISDEQAAMLYINPL---TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKL-LGFKT 166

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQCDKA--LKA 231
           +       +++ L++LGAD  ID + E++              +  DAVG        ++
Sbjct: 167 INVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS 226

Query: 232 VKEGGRVVSIIGS-----VTPPASSFV---LTSDG----------------SILEKLNPY 267
           ++ GG +V+  G      V  P S F+   +T  G                    ++   
Sbjct: 227 LRPGGTLVN-YGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKL 285

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
            E+G +   +  K  FP     EA +  E     GKV++ 
Sbjct: 286 VEAGVLTTPVGAK--FPLEDFEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  114 bits (288), Expect = 1e-29
 Identities = 86/267 (32%), Positives = 120/267 (44%), Gaps = 42/267 (15%)

Query: 1   MKAWVYKEYGN-SQSVLKFETNVEVPSLREDQVLIKVVAAA-----LNPIDFKRMLGAFS 54
           MKA V ++ G   ++ L+  T V VP     +VLIKV A       L+ ++     G   
Sbjct: 1   MKAMVLEKPGPIEENPLRL-TEVPVPEPGPGEVLIKVEACGVCRTDLHIVE-----G--D 52

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDI------NEKALDHP 100
                LP IPG+++ G VE VG  V +F VGD V         G+        E   D+ 
Sbjct: 53  LPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA 112

Query: 101 K-----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSIL 155
           +      +G  AEY   +E      P++    EAA L  A    Y  L+ +    G+  L
Sbjct: 113 RFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQ-RL 171

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215
            L G G    + +Q+A++  GA   A T S    +L R LGAD A D      +  PE  
Sbjct: 172 GLYGFGASAHLALQIARY-QGAEVFAFTRSGEHQELARELGADWAGDSD----DLPPEPL 226

Query: 216 D--VVFDAVGQ-CDKALKAVKEGGRVV 239
           D  ++F  VG     AL+AVK+GGRVV
Sbjct: 227 DAAIIFAPVGALVPAALRAVKKGGRVV 253

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  111 bits (279), Expect = 2e-28
 Identities = 96/332 (28%), Positives = 141/332 (42%), Gaps = 39/332 (11%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           MKA V ++ G    VLK    + +P  +   VLI+V A  LN  + F R   + S     
Sbjct: 1   MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVK--- 55

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P + G +  G VE+       F  G  V   +          +GS AEYT V    +  
Sbjct: 56  FPRVLGIEAVGEVEEAPGG--TFTPGQRVATAMGGMG---RTFDGSYAEYTLVPNEQVYA 110

Query: 120 KPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
              +LS+ E A+LP    TA+  L RS     G ++L+ GG   VG   ++LAK   GA+
Sbjct: 111 IDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKA-LGAT 169

Query: 179 KVAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEKFDVVFDAVG--QCDKALKAVK 233
             A T S  +  LL+ LGAD  +       E +   P  FD V + VG      +L+ ++
Sbjct: 170 VTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLR 229

Query: 234 EGGRV--VSIIG-----------SVTPPASSFVLTSDGSI---LEKLNPYF---ESGKVK 274
            GG V    ++G              P   +  LT   S       L   F    +G + 
Sbjct: 230 PGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLD 289

Query: 275 AIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                   F F + +EA +++ES+RA GKVV+
Sbjct: 290 IPPSKV--FTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  111 bits (280), Expect = 3e-28
 Identities = 102/379 (26%), Positives = 157/379 (41%), Gaps = 86/379 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V K      ++      + VP  +E ++LI+V A  +   D   + G       P 
Sbjct: 1   MKAAVLKGPNPPLTI----EEIPVPRPKEGEILIRVAACGVCHSDLHVLKGE---LPFPP 53

Query: 61  PTIPGYDVAGVVEKVGSQVK---KFKVGDEVYG-----------------DINEKA---- 96
           P + G++++G V +VG  V+      VGD V G                 ++ E      
Sbjct: 54  PFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYN 113

Query: 97  ------LDHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                  D   R              G LAEY  V    LA  P++L + E+A L  A  
Sbjct: 114 RLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGF 173

Query: 138 TAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL 195
           TAY  L+ +A    G+++ V+ G GGVG+  IQLAK  FGAS + A      KL   + L
Sbjct: 174 TAYGALKHAADVRPGETVAVI-GVGGVGSSAIQLAKA-FGASPIIAVDVRDEKLAKAKEL 231

Query: 196 GADLAIDYTKEN----IEDL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSI----I 242
           GA   ++  KE+    I ++      DVV +A+G+      AL  V++GGR V +     
Sbjct: 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG 291

Query: 243 GSVTP-PASSFV---LTSDGSI-------LEKLNPYFESGKVKAIIDPK----GPFPFSQ 287
           G+    P +  V   +   GS        L +L     SGK    +DP+      +   +
Sbjct: 292 GATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGK----LDPEALVTHKYKLEE 347

Query: 288 TLEAFSHLESSRATGKVVI 306
             EA+ +L      G+ ++
Sbjct: 348 INEAYENLRKGLIHGRAIV 366

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  109 bits (276), Expect = 9e-28
 Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 48/280 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA--FSATDS 58
           MKA  Y  +G     ++ E  V  P ++  +V IKV    +   D    L    F  T+ 
Sbjct: 1   MKAARY--HGRKD--IRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEG 55

Query: 59  P-------LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD--INEKALDHPKR------- 102
                    P   G++ +GVV +VGS V  FKVGD V  +  I        KR       
Sbjct: 56  HPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD 115

Query: 103 ----------NGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAG 151
                      G  AEY  V    +   P N+   EAA + PLA   A+  + RS F  G
Sbjct: 116 SLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV--AWHAVRRSGFKPG 173

Query: 152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKEN-IE 209
            + LVL GAG +G + I   K   GASK+  +  S A+ +L   LGA + +D T+ + + 
Sbjct: 174 DTALVL-GAGPIGLLTILALKA-AGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVA 231

Query: 210 DLPEK-----FDVVFDAVG---QCDKALKAVKEGGRVVSI 241
           ++ +       DV FD  G     D A+ A++  G  V++
Sbjct: 232 EVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNV 271

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  108 bits (272), Expect = 3e-27
 Identities = 85/320 (26%), Positives = 126/320 (39%), Gaps = 49/320 (15%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           V VP     +VL+K     +N  D     G +     P P   G++  G V  VG  V  
Sbjct: 23  VPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKP-PFDCGFEGVGEVVAVGEGVTD 81

Query: 82  FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
           FKVGD V       A       G+ AEY  V        P      E   L ++  TA  
Sbjct: 82  FKVGDAV-------ATMS---FGAFAEYQVVPARHA--VPVPELKPEVLPLLVSGLTASI 129

Query: 142 GLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
            LE      +G+++LV   AGG G   +QLAK   G   +   SS  K + L+SLG D  
Sbjct: 130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL-AGCHVIGTCSSDEKAEFLKSLGCDRP 188

Query: 201 IDYTKENIEDL-----PEKFDVVFDAVG--QCDKALKAVKEGGRVVSI-------IGSVT 246
           I+Y  E++ ++     P+  DVV+++VG    D  +  +   GR++ I        G+  
Sbjct: 189 INYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGP 248

Query: 247 PPASSFVLTS--------------------DGSILEKLNPYFESGKVKAIIDPKGPFPFS 286
            P     L                          L++L   ++ GK+   +DP       
Sbjct: 249 SPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLE 308

Query: 287 QTLEAFSHLESSRATGKVVI 306
              +A  +L S +  GKVV+
Sbjct: 309 SVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (268), Expect = 1e-26
 Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 44/274 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A VY+E+G    +      V  P    D V+++V A  +   D+    G     D  L
Sbjct: 1   MRAAVYEEFGEPLEI----REVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP--DVTL 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY---------------GDINEKALDHP---KR 102
           P +PG++ AGVV +VG  V +++VGD V                GD N            
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTH 114

Query: 103 NGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
            GS AEY AV     NL+ L P ++ FV AA L     TA+  L  ++    G+ + V G
Sbjct: 115 PGSFAEYVAVPRADVNLVRL-PDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHG 173

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF--- 215
             GGVG   + +A    GA  +A      KL+L R LGA   ++ ++   ED+       
Sbjct: 174 -CGGVGLSAVMIAS-ALGARVIAVDIDDDKLELARELGAVATVNASEV--EDVAAAVRDL 229

Query: 216 -----DVVFDAVG---QCDKALKAVKEGGRVVSI 241
                 V  DA+G    C  ++ ++++ GR V +
Sbjct: 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQV 263

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  105 bits (263), Expect = 1e-26
 Identities = 65/186 (34%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           PLP  PGY   G V +VGS V  FK GD V+              G  AE   V  NLL 
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------FGPHAERVVVPANLLV 66

Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
             P  L    AA   LA  TA  G+  +    G+ + V+ G G VG +  QLAK   GA 
Sbjct: 67  PLPDGLPPERAALTALA-ATALNGVRDAEPRLGERVAVV-GLGLVGLLAAQLAKA-AGAR 123

Query: 179 KVAATS-STAKLDLLRSLG-ADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVK 233
           +V       A+ +L  +LG AD     T + I       DVV +A G     + AL+ ++
Sbjct: 124 EVVGVDPDAARRELAEALGPADPVAADTADEIGGRG--ADVVIEASGSPSALETALRLLR 181

Query: 234 EGGRVV 239
           + GRVV
Sbjct: 182 DRGRVV 187

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score =  105 bits (265), Expect = 2e-26
 Identities = 80/262 (30%), Positives = 113/262 (43%), Gaps = 41/262 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
            KA V +E     S+  F   + +  L E  VLI+V  ++LN  D      A +AT +  
Sbjct: 1   FKALVVEEQDGGVSL--FLRTLPLDDLPEGDVLIRVHYSSLNYKD------ALAATGNGG 52

Query: 59  ---PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY---GDINEKALDHPKRNGSLAEYTAV 112
                P  PG D AG V    S   +F+ GDEV     D+     +     G  AEY  V
Sbjct: 53  VTRNYPHTPGIDAAGTVVS--SDDPRFREGDEVLVTGYDLGM---NTD---GGFAEYVRV 104

Query: 113 E-ENLLALKPKNLSFVEAASLPLATETA---YEGLERSAFSAGKS-ILVLGGAGGVGTMV 167
             + ++ L P+ LS  EA  L  A  TA      LE +  +     +LV G  GGVG++ 
Sbjct: 105 PADWVVPL-PEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIA 163

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDA 221
           + +     G + VA T    + D L+SLGA   +D  +E++ D  +K      +    D 
Sbjct: 164 VAIL-AKLGYTVVALTGKEEQADYLKSLGASEVLD--REDLLDESKKPLLKARWAGAIDT 220

Query: 222 VG--QCDKALKAVKEGGRVVSI 241
           VG       LK  K GG V S 
Sbjct: 221 VGGDVLANLLKQTKYGGVVASC 242

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  105 bits (263), Expect = 2e-26
 Identities = 93/308 (30%), Positives = 136/308 (44%), Gaps = 44/308 (14%)

Query: 23  EVPSLR--EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           EVP  +    + L++V A +LN  + K       A + P   +PG+D AGVVE+  +   
Sbjct: 18  EVPDPQPAPHEALVRVAAISLNRGELKF------AAERPDGAVPGWDAAGVVERAAADGS 71

Query: 81  KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
              VG  V G             G+ AE  AV    LA+ P  +SF +AA+LP+A  TA 
Sbjct: 72  GPAVGARVVG---------LGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTAL 122

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
             L R     G+ +LV G +GGVG   +QLA    GA  VA   S A+ + LR LG   A
Sbjct: 123 RALRRGGPLLGRRVLVTGASGGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELG---A 178

Query: 201 IDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKEGGRVVSI-----IGSVTPPASSFV 253
            +      E      D+V D+VG  Q  +AL+ +  GG VVS+       +V  PA+   
Sbjct: 179 AEVVVGGSELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVG 238

Query: 254 LTSDGSI--------------LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSR 299
                 +              L +L     +G++   I  +G   +++  EA   L + R
Sbjct: 239 GGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRG--SWTEIDEAAEALLARR 296

Query: 300 ATGKVVIH 307
             GK V+ 
Sbjct: 297 FRGKAVLD 304

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  105 bits (265), Expect = 3e-26
 Identities = 93/358 (25%), Positives = 142/358 (39%), Gaps = 58/358 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAAL---------NPIDF---KR 48
           MKA    E G     L+ E  ++ P     +VL+KV A  +            D    K 
Sbjct: 1   MKAAAVVEPG---KPLE-EVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKT 56

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDE--VY-------------GDIN 93
           M          LP + G+++ G V  VG      KVGD+  VY             GD N
Sbjct: 57  MS--LDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDEN 114

Query: 94  EKALDHP---KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
             A        ++G  AEY  V  +   + P  L    AA+L  +  TAY  +++     
Sbjct: 115 LCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLV 174

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-----YTK 205
               +V+ GAGG+G M + L K +  A+ +      AKL+  ++ GAD+ ++       K
Sbjct: 175 ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK 234

Query: 206 ENIEDLPEKFDVVFDAVGQCD---KALKAVKEGGRVVSI---IGSVTPPASSFVLTS--- 256
             I+      D V D V        A   + +GG++V +    G  T P     L +   
Sbjct: 235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTI 294

Query: 257 DGSI---LEKLNPYFE---SGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
            GS    LE+L        +GK+K I  P    P S   +A   L++ +  G+ V+ P
Sbjct: 295 QGSYVGSLEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  104 bits (263), Expect = 5e-26
 Identities = 89/351 (25%), Positives = 139/351 (39%), Gaps = 55/351 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATD 57
            KA VY E+G  + VL+ E+    P    ++VL+K++AA +NP D  ++ G +     T 
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
              P + G +  G V KVGS VK  K GD V        +      G+   +  V  + L
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWV--------IPLRPGLGTWRTHAVVPADDL 112

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++   +AA+L +   TAY  LE       G  ++  G    VG  VIQLAK   G
Sbjct: 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKL-LG 171

Query: 177 ASKVAA---TSSTAKL-DLLRSLGADLAI-------DYTKENIEDLPEK-----FDVVFD 220
              +          +L + L++LGAD  +           E ++  P        + V  
Sbjct: 172 IKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG 231

Query: 221 AVGQCDKALKAVKEGGRVVSIIG----SVTPPASSFV---LTSDG--------------- 258
                 +  + +  GG +V+  G     VT P S  +   +T  G               
Sbjct: 232 KSAT--ELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEK 289

Query: 259 -SILEKLNPYFESGKVKAIIDPKGPF-PFSQTLEAFSHLESSRATGKVVIH 307
             +LE+L      GK+KA    K    P  +  +A ++       GK V+ 
Sbjct: 290 EDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLV 340

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  103 bits (259), Expect = 2e-25
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 39/258 (15%)

Query: 2   KAWVYKEY--GNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           +  V  +   G       +    V +P L++ +VL++ +  +++P     M G  S   S
Sbjct: 3   RQVVLAKRPEGPPPPDDFELVE-VPLPELKDGEVLVRTLYLSVDPY----MRGWMSDAKS 57

Query: 59  PLP------TIPGYDVAGVVEKVGSQVKKFKVGDEVYG--DINEKALDHPKRNGSLAEYT 110
             P       + G  V  VVE   S+   FKVGD V G     E A+             
Sbjct: 58  YSPPVQLGEPMRGGGVGEVVE---SRSPDFKVGDLVSGFLGWQEYAVVDGAS-----GLR 109

Query: 111 AVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQ 169
            ++ +L       L  +    L     TAY GL        G++++V   AG VG++V Q
Sbjct: 110 KLDPSLGLPLSAYLGVLGMTGL-----TAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQ 164

Query: 170 LAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
           +AK + GA  V    S  K   L   LG D AI+Y   ++ +      P+  DV FD VG
Sbjct: 165 IAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVG 223

Query: 224 --QCDKALKAVKEGGRVV 239
               D AL  + +GGR+ 
Sbjct: 224 GEILDAALTLLNKGGRIA 241

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  103 bits (258), Expect = 3e-25
 Identities = 97/336 (28%), Positives = 139/336 (41%), Gaps = 60/336 (17%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS--PLPTIPGYDVAGVVEKVG 76
             ++  P     +VL++V    +   D    L  +   +     P I G++++G V +VG
Sbjct: 14  VVDIPEPVPGAGEVLVRVKRVGICGSD----LHIYHGRNPFASYPRILGHELSGEVVEVG 69

Query: 77  SQVKKFKVGDEVYGDI--------------------NEKALDHPKRNGSLAEYTAVEENL 116
             V   KVGD V  D                      +    H  R+G  AEY  V  + 
Sbjct: 70  EGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVH--RDGGFAEYIVVPADA 127

Query: 117 LALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF 175
           L L P+ LS  +AA + PLA       + R+  +AG ++LV+G AG +G  VIQ+AK   
Sbjct: 128 L-LVPEGLSLDQAALVEPLAI--GAHAVRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR- 182

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP------EKFDVVFDAVGQCD--- 226
           GA  +       +L+  R LGAD  I+   E++          E  DVV DA G      
Sbjct: 183 GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASME 242

Query: 227 KALKAVKEGGRVVSIIGSVTPPASSFV--------LTSDGSIL------EKLNPYFESGK 272
           +A++ V  GGRVV ++G    P  +F         LT  GS          +    ESGK
Sbjct: 243 EAVELVAHGGRVV-LVGLSKGP-VTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGK 300

Query: 273 VKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIH 307
           V         FPF    EAF   E+      KV+I 
Sbjct: 301 VDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE 336

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  102 bits (256), Expect = 4e-25
 Identities = 92/346 (26%), Positives = 138/346 (39%), Gaps = 65/346 (18%)

Query: 10  GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVA 69
           G+    L+      VP     +VL++V A+ L   D         A       IPG++ A
Sbjct: 8   GDRTVELR---EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ-GVIPGHEPA 63

Query: 70  GVVEKVGSQVKKFKVGDEV------------YGD-------INEKALDHPKRNGSLAEYT 110
           GVV  VG  V  F+VGD V                       +++A     R+G  AEY 
Sbjct: 64  GVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYM 123

Query: 111 AVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
            V E  L   P +LSF + A L     TAY  L R   S   ++LV+ GAG VG   + L
Sbjct: 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVV-GAGPVGLGALML 182

Query: 171 AKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPE-----KFDVVFDAVGQ 224
           A+   GA  V     S  +L+L ++LGAD  I+  +++++++ E       DV  +  G 
Sbjct: 183 AR-ALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGN 241

Query: 225 C---DKALKAVKEGGRVV---------------------SIIGSVTPPASSFVLTSDGSI 260
                 AL+AV+  GR+V                     ++IGS     S   +      
Sbjct: 242 TAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWY--FSVPDMEECAEF 299

Query: 261 LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           L +         V  ++  +  F   Q  EA++       +GKVV 
Sbjct: 300 LARHKLE-----VDRLVTHR--FGLDQAPEAYALFA-QGESGKVVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 99.7 bits (249), Expect = 2e-24
 Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 39/250 (15%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  P     +VLIKV AA +   D       +     P   P + G++ +G + +VG  V
Sbjct: 19  VPEPEPGPGEVLIKVAAAGICGSDLH----IYKGDYDPVETPVVLGHEFSGTIVEVGPDV 74

Query: 80  KKFKVGDEVY----------------GDIN---EKALDHPKRNGSLAEYTAVEENLLALK 120
           + +KVGD V                 GD N    +     + +G  AEY  V E  L   
Sbjct: 75  EGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL 134

Query: 121 PKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+NLS   AA + PLA    +   ERS    G +++V  G G +G +  Q+AK       
Sbjct: 135 PENLSLEAAALTEPLAV-AVHAVAERSGIRPGDTVVVF-GPGPIGLLAAQVAKLQGATVV 192

Query: 180 VAATSSTA-KLDLLRSLGADLAIDYTKENIEDLP------EKFDVVFD---AVGQCDKAL 229
           V  T     +LD+ + LGAD A++  +E++ +L       +  DVV +   AV   ++AL
Sbjct: 193 VVGTEKDEVRLDVAKELGAD-AVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQAL 251

Query: 230 KAVKEGGRVV 239
           + +++GGR+V
Sbjct: 252 ELLRKGGRIV 261

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 99.8 bits (249), Expect = 5e-24
 Identities = 93/360 (25%), Positives = 129/360 (35%), Gaps = 67/360 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A VY   G+ +           P      VLI+V A  +   D     G         
Sbjct: 2   KAAVVYVGGGDVR-----LEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPG- 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY-----------------------GDINEKAL 97
             I G++  G V +VG  V+ FKVGD V                              A 
Sbjct: 56  DIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 98  DHPKRNGSLAEYTAV-EENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSIL 155
                +G  AEY  V  +  LA  P  +    AA + PLAT  AY G    A       +
Sbjct: 115 LGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLAT--AYHGHAERAAVRPGGTV 172

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL--- 211
           V+ GAG +G + I LAK   GAS V     S  +L+L +  G    +    E+       
Sbjct: 173 VVVGAGPIGLLAIALAKL-LGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231

Query: 212 ----PEKFDVVFDAVG---QCDKALKAVKEGGRVVSIIGSVTPPASSFV---------LT 255
                   DVV +AVG     D+AL+A++ GG VV ++G V       +         LT
Sbjct: 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVV-VVG-VYGGEDIPLPAGLVVSKELT 289

Query: 256 SDGSILEKLNPYFESGKVKAI----IDPKG----PFPFSQTLEAFSHLESSRAT-GKVVI 306
             GS+       FE   +  +    IDP+       P     EA+      +    KVV+
Sbjct: 290 LRGSLRPSGREDFE-RALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVL 348

Length = 350

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 96.4 bits (241), Expect = 7e-23
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 50/261 (19%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           T+V VP    + VLIKV   A+   D        ++    P+P + G++  G V +VGS+
Sbjct: 16  TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSE 75

Query: 79  VKKFKVGDEVYG-------------------DINEKAL--DHPKRNGSLAEYTAV-EENL 116
           V  FKVGD V G                     N K +  +   R G+ AEY  +   N+
Sbjct: 76  VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN---RPGAFAEYLVIPAFNV 132

Query: 117 LALKPKNLSFVEAASL-PL--ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAK 172
             + P ++    AA   P   A  TA       +F   G+ +L+ G AG +G M   +AK
Sbjct: 133 WKI-PDDIPDDLAAIFDPFGNAVHTAL------SFDLVGEDVLITG-AGPIGIMAAAVAK 184

Query: 173 HVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ- 224
           HV GA  V  T  +  +L+L R +GA  A++  KE++ D      + E FDV  +  G  
Sbjct: 185 HV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAP 243

Query: 225 --CDKALKAVKEGGRVVSIIG 243
               + L  +  GGR ++++G
Sbjct: 244 SAFRQMLDNMNHGGR-IAMLG 263

Length = 341

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 95.6 bits (239), Expect = 1e-22
 Identities = 93/354 (26%), Positives = 144/354 (40%), Gaps = 81/354 (22%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPID---FKRM-LGAFSATDSPLPTIPGYDVAGV 71
           L+ E    +P     +VL++V A  +   D   +K   +G F   +   P + G++ AG 
Sbjct: 10  LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE---PMVLGHESAGT 65

Query: 72  VEKVGSQVKKFKVGDEV---------------YGDINEKALD-------HPKRNGSLAEY 109
           V  VGS V   KVGD V                G  N   L         P  +G+L  Y
Sbjct: 66  VVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYN---LCPDMRFAATPPVDGTLCRY 122

Query: 110 TAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
                +     P N+S  E A + PL+         R+    G ++LV  GAG +G +  
Sbjct: 123 VNHPADFCHKLPDNVSLEEGALVEPLS--VGVHACRRAGVRPGDTVLVF-GAGPIGLLTA 179

Query: 169 QLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVV 218
            +AK  FGA+KV  T    ++L+  + LGA   ++   E+  +  EK          DVV
Sbjct: 180 AVAK-AFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVV 238

Query: 219 FDAVG--QCDK-ALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYF------- 268
            +  G   C + A+ A + GG VV ++G +  P  +  L++  + L +++          
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVV-LVG-MGKPEVTLPLSA--ASLREIDIRGVFRYANT 294

Query: 269 --------ESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATG----KVVIHP 308
                    SGK  VK +I     FP    +EAF   E++        KVVI  
Sbjct: 295 YPTAIELLASGKVDVKPLIT--HRFPLEDAVEAF---ETAAKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 94.6 bits (236), Expect = 3e-22
 Identities = 111/368 (30%), Positives = 156/368 (42%), Gaps = 87/368 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDF----------KRML 50
           MKA V K      + L     V VP     +VLIKV+AA++   D            R+ 
Sbjct: 1   MKAIV-KTKAGPGAELV---EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIK 56

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------NEKAL 97
                   P P I G++ AG V +VG  V + KVGD V  +              N    
Sbjct: 57  --------P-PLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVC 107

Query: 98  DHPK-----RNGSLAEYTAVEENLLALKPKNLSFVEAASL--PL--ATETAYEGLERSAF 148
            + K      +G  AEY  V E  L    K++   E AS+  PL  A  T   G      
Sbjct: 108 QNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPP-EIASIQEPLGNAVHTVLAGD----- 161

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKEN 207
            +GKS+L+ G  G +G M I +AK   GAS V A+  +  +L+L + +GAD+ I+  +E+
Sbjct: 162 VSGKSVLITG-CGPIGLMAIAVAK-AAGASLVIASDPNPYRLELAKKMGADVVINPREED 219

Query: 208 IEDLPEKF-----DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS 259
           + ++         DVV +  G     ++ LKA+  GGR VSI+G + P      L +   
Sbjct: 220 VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGR-VSILG-LPPGPVDIDLNNL-V 276

Query: 260 ILEKLNPY-------FE----------SGKV--KAIIDPKGPFPFSQTLEAFSHLESSRA 300
           I + L          FE          SGKV    +I  K   P     EAF  L  S  
Sbjct: 277 IFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHK--LPLEDFEEAFE-LMRSGK 333

Query: 301 TGKVVIHP 308
            GKVV++P
Sbjct: 334 CGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 94.5 bits (236), Expect = 4e-22
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 67/311 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V  E G    +      VE+      +VL+++ AA L   D   + G   A   PL
Sbjct: 1   MRAAVLHEVGKPLEI----EEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PL 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------YGDINEK 95
           P + G++ AGVVE+VG  V   K GD V                          G +  +
Sbjct: 54  PAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQ 113

Query: 96  ALDHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG 142
             D  +R              G+ AEYT V E  +     ++    AA L     T   G
Sbjct: 114 LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGV-G 172

Query: 143 --LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADL 199
             +  +    G ++ V+G  GGVG   IQ A+   GAS+ +A      KL+L R  GA  
Sbjct: 173 AVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATH 230

Query: 200 AIDYTKENIEDL------PEKFDVVFDAVG---QCDKALKAVKEGGRVVSIIG------S 244
            ++ ++++  +           D  F+AVG      +AL   ++GG  V ++G      +
Sbjct: 231 TVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAV-VVGMGPPGET 289

Query: 245 VTPPASSFVLT 255
           V+ PA    L+
Sbjct: 290 VSLPALELFLS 300

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 90.8 bits (226), Expect = 7e-21
 Identities = 68/232 (29%), Positives = 91/232 (39%), Gaps = 37/232 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA    E G    +       +VP     +VLIKV A  +   D     GA        
Sbjct: 1   YKAVQVTEPGGPLEL----VERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------------------YGDINEKA 96
           P +PG++V G ++ VG  V ++KVGD V                         G +    
Sbjct: 55  PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
            D     G  AEY       LA  P +L   EAA L  A  T +  L  S    G  + V
Sbjct: 115 RD-----GGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAV 169

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI 208
             G GG+G + +Q A    G   VA +  + K DL R LGA   ID +KE++
Sbjct: 170 Q-GIGGLGHLAVQYAAK-MGFRTVAISRGSDKADLARKLGAHHYIDTSKEDV 219

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 70/238 (29%), Positives = 92/238 (38%), Gaps = 39/238 (16%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD-----VAGVVEKV- 75
           V+VP   E QVL++ +  +L+P     M G  S   S     P  +     V G V KV 
Sbjct: 32  VDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPS---YAPPVELGEVMVGGTVAKVV 84

Query: 76  GSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA---LKPKNLSFVEAASL 132
            S    F+ GD V G                 EY   +   L      P  LS      L
Sbjct: 85  ASNHPGFQPGDIVVG------------VSGWQEYAISDGEGLRKLDPSPAPLSA-YLGVL 131

Query: 133 PLATETAYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL 191
            +   TAY GL       AG++++V   AG VG++V Q+AK   G   V       K D 
Sbjct: 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLK-GCRVVGIAGGAEKCDF 190

Query: 192 LRS-LGADLAIDYTKEN-----IEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSI 241
           L   LG D  IDY  E+      E  P+  DV F+ VG    D  L  +    R+   
Sbjct: 191 LTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVC 248

Length = 340

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 88.4 bits (220), Expect = 4e-20
 Identities = 89/342 (26%), Positives = 143/342 (41%), Gaps = 55/342 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETN-VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA + +EYG    V +      EVP     +VLIKV AA +NP D   + G + +T   
Sbjct: 1   MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST-KA 59

Query: 60  LPTIPGYDVAGVVEKVG-SQVKKFKVGDEV--YGDINEKALDHPKRNGSLAEYTAVEENL 116
           LP  PG++ +G V   G   + +  +G  V                 G+ AEY   +   
Sbjct: 60  LPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGS----------YGTYAEYAVADAQQ 109

Query: 117 LALKPKNLSFVEAASL---PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
               P  +SF + AS    PL   TA   LE +     K+++    A  +G M+++L K 
Sbjct: 110 CLPLPDGVSFEQGASSFVNPL---TALGMLETAREEGAKAVVHTAAASALGRMLVRLCKA 166

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPE-----KFDVVFDAVG--QC 225
             G   +       ++DLL+ +GA+  ++ +  +  EDL E        + FDAVG    
Sbjct: 167 D-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLT 225

Query: 226 DKALKAVKEGGRVV---SIIGSVTPPASS------------FVLTSDGSILEKLNPYFES 270
            + L A+  G  +     + G +  P               F LT   + L+KL P    
Sbjct: 226 GQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLT---TWLQKLGP-EVV 281

Query: 271 GKVKAII------DPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            K+K ++           +P + TLEA +    + +TGK ++
Sbjct: 282 KKLKKLVKTELKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 87.8 bits (218), Expect = 6e-20
 Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 29/233 (12%)

Query: 20  TNVEVPSLREDQVLIKVVAAAL---NPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVG 76
                P+    QVL++V    +   +   F +    F       P  PG++  G V  +G
Sbjct: 10  EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVY--PAEPGGPGHEGWGRVVALG 67

Query: 77  SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
             V+   VGD V G ++          G+ AEY   + +     P  L        PL  
Sbjct: 68  PGVRGLAVGDRVAG-LSG---------GAFAEYDLADADHAVPLPSLLDGQAFPGEPLG- 116

Query: 137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL 195
             A     R    AGK++ V+ GAG +G + +QLA    GA +V A     A+L L R L
Sbjct: 117 -CALNVFRRGWIRAGKTVAVI-GAGFIGLLFLQLAA-AAGARRVIAIDRRPARLALAREL 173

Query: 196 GADLAIDYTKENIEDLPEK------FDVVFDAVGQ---CDKALKAVKEGGRVV 239
           GA   +    E I +   +       DVV +AVG     D A + V E GR+V
Sbjct: 174 GATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLV 226

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 83.6 bits (207), Expect = 6e-20
 Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 21/131 (16%)

Query: 195 LGADLAIDYTKENIEDL--PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVTPPAS 250
           LGAD  IDYT E+ E+    E  DVV D VG     +AL A+K GGR+VSI G     + 
Sbjct: 1   LGADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDLLLSV 60

Query: 251 SFVL---------------TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHL 295
           +                     G+ L +L    E+GK++ +ID    FP  +  EA  +L
Sbjct: 61  AAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRV--FPLEEAAEAHRYL 118

Query: 296 ESSRATGKVVI 306
           ES RA GKVV+
Sbjct: 119 ESGRARGKVVL 129

Length = 129

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 87/343 (25%), Positives = 129/343 (37%), Gaps = 59/343 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V    G    +     ++  P     + L++V+ A +   D +   G       P 
Sbjct: 1   MKALVL--DGG---LDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKG-----YYPF 50

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN-------------------EKALDHPK 101
           P +PG++  G+VE+         VG  V G+IN                      L    
Sbjct: 51  PGVPGHEFVGIVEEGPEAE---LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVD 107

Query: 102 RNGSLAEY-TAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGG 159
           R+G+ AEY T   ENL  + P  +   +A    PLA   A E LE+   + G  + VL G
Sbjct: 108 RDGAFAEYLTLPLENLHVV-PDLVPDEQAVFAEPLA--AALEILEQVPITPGDKVAVL-G 163

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVF 219
            G +G ++ Q+     G   V     + KL L R LG +  +    E+       FDVV 
Sbjct: 164 DGKLGLLIAQVLAL-TGPDVVLVGRHSEKLALARRLGVETVLPDEAES---EGGGFDVVV 219

Query: 220 DAVGQCD---KALKAVKEGGRVV--SIIGSVTP-PASSFV---LTSDGS---ILEKLNPY 267
           +A G       AL+ V+  G VV  S          +  V   +T  GS           
Sbjct: 220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRL 279

Query: 268 FESGKV--KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
              G V    +I     +P  + LEAF    +     KV++ P
Sbjct: 280 LRKGLVDVDPLIT--AVYPLEEALEAFER-AAEPGALKVLLRP 319

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 84.6 bits (210), Expect = 1e-18
 Identities = 90/361 (24%), Positives = 140/361 (38%), Gaps = 67/361 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           MKA VY   G      K     V  P ++     +++V A ++   D     G      +
Sbjct: 1   MKALVYLGPG------KIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGG--VPGA 52

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------YGDINEKALDHPK 101
               I G++  G V +VGS VK+ K GD V                 Y    E  L   K
Sbjct: 53  KHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWK 112

Query: 102 R----NGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
                +G  AEY  V     NL  + P  L   +A  L     T + G E +    G ++
Sbjct: 113 LGNRIDGGQAEYVRVPYADMNLAKI-PDGLPDEDALMLSDILPTGFHGAELAGIKPGSTV 171

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPE 213
            V+G AG VG   +  A+   GA+++ A  S   +LDL +  GA   I+    +I +   
Sbjct: 172 AVIG-AGPVGLCAVAGARL-LGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQIL 229

Query: 214 K------FDVVFDAVG---QCDKALKAVKEGGRVVSIIGS-VTP-PASSFVLTSDGSI-- 260
           +       D V +AVG     ++A+K V+ GG  ++ +G    P P          ++  
Sbjct: 230 ELTGGRGVDCVIEAVGFEETFEQAVKVVRPGG-TIANVGVYGKPDPLPLLGEWFGKNLTF 288

Query: 261 ----------LEKLNPYFESGKVKA--IIDPKGPFPFSQTLEAFSHLESSRATG-KVVIH 307
                     + +L    E GK+    +I  +  FP    L+A+   ++      KVVI 
Sbjct: 289 KTGLVPVRARMPELLDLIEEGKIDPSKLITHR--FPLDDILKAYRLFDNKPDGCIKVVIR 346

Query: 308 P 308
           P
Sbjct: 347 P 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 92/359 (25%), Positives = 141/359 (39%), Gaps = 66/359 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA V+K  G     ++ E  V +P +++    ++KV AAA+   D     G      S 
Sbjct: 1   MKAVVFKGPG----DVRVEE-VPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---ST 52

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-DINE-------KALDH------------ 99
              + G++  G V +VG +V+  KVGD V              +                
Sbjct: 53  PGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYA 112

Query: 100 --PKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
             P  +G+ AEY  V   +  LL L P  LS   A  L     T Y G +R+    G ++
Sbjct: 113 GSPNLDGAQAEYVRVPFADGTLLKL-PDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTV 171

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGA---DLAIDYTKENIED 210
            V+G  G VG   +  A+   GA++V A      +L+   +LGA   +       E + +
Sbjct: 172 AVIG-CGPVGLCAVLSAQV-LGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVRE 229

Query: 211 LPEK--FDVVFDAVGQCDKALK----AVKEGGRVVSIIGSVTPPAS-------------S 251
             E    DVV +AVG    AL      V+ GG + S+                       
Sbjct: 230 ATEGRGADVVLEAVGG-AAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLR 288

Query: 252 FVLTSDGSILEKLNPYFESGKVK--AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           F      S+  +L P  ESG++    +ID +   P  +  EA+   +  R   KVV+ P
Sbjct: 289 FGRCPVRSLFPELLPLLESGRLDLEFLIDHRM--PLEEAPEAYRLFD-KRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 83.4 bits (207), Expect = 3e-18
 Identities = 79/258 (30%), Positives = 115/258 (44%), Gaps = 41/258 (15%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL--- 60
            V KE  + +   + ET +++  L E  VLIKV  ++LN   +K  L   + T       
Sbjct: 4   VVEKE--DGKVSAQVET-LDLSDLPEGDVLIKVAYSSLN---YKDAL---AITGKGGVVR 54

Query: 61  --PTIPGYDVAGVVEKVGSQVKKFKVGDEVY---GDINEKALDHPKRNGSLAEYTAVEEN 115
             P IPG D AG V  V S+  +F+ GDEV      +      H    G  ++Y  V  +
Sbjct: 55  SYPMIPGIDAAGTV--VSSEDPRFREGDEVIVTGYGLGV---SHD---GGYSQYARVPAD 106

Query: 116 LLALKPKNLSFVEAASLPLATETA---YEGLERSAFSAG-KSILVLGGAGGVGTMVIQ-L 170
            L   P+ LS  EA +L  A  TA      LER+  +     +LV G  GGVG++ +  L
Sbjct: 107 WLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAIL 166

Query: 171 AKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG-- 223
           +K   G   VA+T    + D L+ LGA   ID  +E++         E++    D VG  
Sbjct: 167 SK--LGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPGKPLEKERWAGAVDTVGGH 222

Query: 224 QCDKALKAVKEGGRVVSI 241
                L  +K GG V + 
Sbjct: 223 TLANVLAQLKYGGAVAAC 240

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 83.4 bits (206), Expect = 4e-18
 Identities = 91/339 (26%), Positives = 144/339 (42%), Gaps = 62/339 (18%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           T V VP     +VLIKV+A ++   D        ++ +    P + G++VAG V  +G  
Sbjct: 14  TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPG 73

Query: 79  VKKFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALK 120
           V+  KVGD V  + +          +   H  +N         G  AEY  V    +   
Sbjct: 74  VEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN 133

Query: 121 PKNLSFVEAASL--PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
           PK++   E A++  PL  A  T   G       +GKS+LV  GAG +G M I +AK   G
Sbjct: 134 PKSIP-PEYATIQEPLGNAVHTVLAGP-----ISGKSVLVT-GAGPIGLMAIAVAKAS-G 185

Query: 177 ASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ---CD 226
           A  V  +  +  +L+L + +GA   ++  KE++          E  DV  +  G     +
Sbjct: 186 AYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALE 245

Query: 227 KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG--------KVKAIID 278
           + L+AV  GGR VS++G   PP    +  ++  I + L  Y  +G         V  +I 
Sbjct: 246 QGLQAVTPGGR-VSLLG--LPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQ 302

Query: 279 PKG---------PFPFSQTLEAFSHLESSRATGKVVIHP 308
                        F F +  + F  + S + TGKV++  
Sbjct: 303 SGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 80.4 bits (199), Expect = 3e-17
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 28/236 (11%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
            E+P L++ +VL + +  +++P      +  +S   +   T+ G  VA V+E   S+  K
Sbjct: 26  EELPPLKDGEVLCEALFLSVDPY-----MRPYSKRLNEGDTMIGTQVAKVIE---SKNSK 77

Query: 82  FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLS---FVEAASLPLATET 138
           F VG  V    +     H   +G           L A  P +L     +    +P  T  
Sbjct: 78  FPVGTIVVA--SFGWRTHTVSDGKDQ---PDLYKLPADLPDDLPPSLALGVLGMPGLT-- 130

Query: 139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA 197
           AY GL E     AG++++V G AG VG++V Q+AK + G   +    S  K+  L+ LG 
Sbjct: 131 AYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAK-IKGCKVIGCAGSDDKVAWLKELGF 189

Query: 198 DLAIDYTKENIEDL-----PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSVT 246
           D   +Y   ++E+      P+  D  FD VG       L  + + GR V++ GS++
Sbjct: 190 DAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGR-VAVCGSIS 244

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 78.7 bits (195), Expect = 1e-16
 Identities = 72/253 (28%), Positives = 104/253 (41%), Gaps = 36/253 (14%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
              E   L  D V IK+    +   D   +   +  T  PL  +PG+++ G+V  VGS+V
Sbjct: 15  FTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPL--VPGHEIVGIVVAVGSKV 72

Query: 80  KKFKVGDEV--------------------------YGDINEKALDHPKRNGSLAEYTAVE 113
            KFKVGD V                              N K  D     G  A++  V+
Sbjct: 73  TKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVD 132

Query: 114 ENLLALK-PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           E     K P+ L    AA L  A  T Y  L+R+    GK + V+G  GG+G + ++ AK
Sbjct: 133 ERF-VFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAK 190

Query: 173 HVFGASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDLPEKFDVVFDAVGQC---DKA 228
              GA   A + S +K +    LGAD  I     E ++      D++ D V      D  
Sbjct: 191 A-LGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPY 249

Query: 229 LKAVKEGGRVVSI 241
           L  +K GG +V +
Sbjct: 250 LSLLKPGGTLVLV 262

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 45/262 (17%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEK 74
           L+ E     P     +V ++V A  +   D      G F       P + G++V+GVVE 
Sbjct: 9   LRVEE-RPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEA 67

Query: 75  VGSQVKKFKVGDEV---------------------------YGDINEKALDHPKRNGSLA 107
           VG  V     G  V                            G     A+  P   G   
Sbjct: 68  VGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLG----SAMRFPHVQGGFR 123

Query: 108 EYTAVEENLLALKPKNLSFVEAA-SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTM 166
           EY  V+ +     P  LS   AA + PLA   A   + R+   AGK +LV G AG +G +
Sbjct: 124 EYLVVDASQCVPLPDGLSLRRAALAEPLAV--ALHAVNRAGDLAGKRVLVTG-AGPIGAL 180

Query: 167 VIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAV 222
           V+  A+   GA+++ AT  + A L + R++GAD  ++  ++ +         FDVVF+A 
Sbjct: 181 VVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEAS 239

Query: 223 GQ---CDKALKAVKEGGRVVSI 241
           G       AL+ V+ GG VV +
Sbjct: 240 GAPAALASALRVVRPGGTVVQV 261

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 77.5 bits (191), Expect = 4e-16
 Identities = 87/278 (31%), Positives = 122/278 (43%), Gaps = 46/278 (16%)

Query: 59  PLPTIP---GYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEE 114
           P P++P   G + AGVV KVGS VK  KVGD V Y    + AL      G+ +    V  
Sbjct: 53  PPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYA---QSAL------GAYSSVHNVPA 103

Query: 115 NLLALKPKNLSFVEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKH 173
           +  A+ P  +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK 
Sbjct: 104 DKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK- 162

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPE-----KFDVVFDAVGQC-- 225
             GA  +    S  K    +  GA   I+Y +ENI E + E     K  VV+D+VG+   
Sbjct: 163 ALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTW 222

Query: 226 DKALKAVKEGGRVVSI-----------------IGS--VTPPASSFVLTSDGSILEKLNP 266
           + +L  ++  G +VS                   GS  VT P+    +T+   + E  N 
Sbjct: 223 EASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE 282

Query: 267 YFE---SGKVKAIIDPKGPFPFSQTLEAFSHLESSRAT 301
            F    SG +K  +  +  FP      A   LE SRAT
Sbjct: 283 LFSLIASGVIKVDVAEQQKFPLKDAQRAHEILE-SRAT 319

Length = 327

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 77.5 bits (191), Expect = 4e-16
 Identities = 72/273 (26%), Positives = 103/273 (37%), Gaps = 56/273 (20%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           +EV   +  +V IKVVA  +   D   + G      +PLP I G++ AG+VE +G  V  
Sbjct: 18  IEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT 74

Query: 82  FKVGDEV-----------------------YGDI----------------NEKALDHPKR 102
            K GD+V                                             K + H   
Sbjct: 75  LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLG 134

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAG 161
             + AEYT V E  LA    +    +   +     T Y     +A  + G +  V  G G
Sbjct: 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVF-GLG 193

Query: 162 GVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK--- 214
           GVG  VI   K   GAS++ A   +  K +  + LGA   I   D  K  +E L E    
Sbjct: 194 GVGLSVIMGCK-AAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDG 252

Query: 215 -FDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
             D  F+ +G  D   +AL A + GG    ++G
Sbjct: 253 GVDYAFEVIGSADTLKQALDATRLGGGTSVVVG 285

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 76.8 bits (190), Expect = 4e-16
 Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 32/238 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V ++     S  +    ++   L E  V ++V  + LN   +K  L         +
Sbjct: 1   FKALVLEKDDGGTSA-ELRE-LDESDLPEGDVTVEVHYSTLN---YKDGLAI--TGKGGI 53

Query: 61  ----PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P +PG D+AG V  V S   +FK GD V    +G + E+        G  A+   V
Sbjct: 54  VRTFPLVPGIDLAGTV--VESSSPRFKPGDRVVLTGWG-VGER------HWGGYAQRARV 104

Query: 113 EENLLALKPKNLSFVEAASLPLATETAY---EGLERSAFSAGKS-ILVLGGAGGVGTMVI 168
           + + L   P+ LS  +A ++  A  TA      LE    + G   +LV G AGGVG++ +
Sbjct: 105 KADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAV 164

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP---EKFDVVFDAVG 223
            L   + G   VA+T    + D LRSLGA   ID  + +    P   E++    D VG
Sbjct: 165 ALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVG 221

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 76.9 bits (190), Expect = 7e-16
 Identities = 93/365 (25%), Positives = 137/365 (37%), Gaps = 71/365 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA+     G    +        +P    +  +++  A A    D   + G   A     
Sbjct: 1   MKAFAMLGIGKVGWI-----EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGG--APGERH 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVY-GDIN-----EKALD-HPK------------ 101
             I G++  GVVE+VGS+VK FK GD V    I        A   +P             
Sbjct: 54  GMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFS 113

Query: 102 --RNGSLAEYTAVEE---NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             ++G  AEY  V +   NL A  P  L+  +A  LP    T + G E +    G ++ V
Sbjct: 114 NFKDGVFAEYFHVNDADANL-APLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAV 172

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTK----ENIEDL 211
            G  G VG M +  A+   GA ++ A  S    ++L +  GA   +DY      E I  L
Sbjct: 173 FG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKL 230

Query: 212 P--EKFDVVFDAVGQCD---KALKAVKEGGRVVSIIG-----SVTPPASSF--------- 252
              +  D V  A G  D   +ALK +K GG + ++        +  P   +         
Sbjct: 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTI 290

Query: 253 --VLTSDGSI-LEKLNPYFESGKVKAIIDPKGP-----FPFSQTLEAFSHLESSRA-TGK 303
              L   G + +E+L    E G+V    DP        F F    EA   ++       K
Sbjct: 291 NGGLCPGGRLRMERLASLIEYGRV----DPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK 346

Query: 304 VVIHP 308
            VI  
Sbjct: 347 PVIIF 351

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 71.1 bits (175), Expect = 1e-15
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 21/110 (19%)

Query: 29  EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
             +VL++V AA +   D     G        LP I G++ AG+VE+VG  V   KVGD V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPV--KLPLILGHEGAGIVEEVGPGVTGLKVGDRV 58

Query: 89  YGDI-------------NEKALDHPK-----RNGSLAEYTAV-EENLLAL 119
                             E    + K      +G  AEY  V   NL+ L
Sbjct: 59  VVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEK------ 214
           GVG   +QLAK   GA++V A   +  KL+L + LGAD  I+Y  E+  +   +      
Sbjct: 1   GVGLAAVQLAKA-LGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRG 59

Query: 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS 250
            DVV D VG     ++AL+ ++ GGRVV +      P  
Sbjct: 60  VDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVP 98

Length = 131

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 82/357 (22%), Positives = 120/357 (33%), Gaps = 79/357 (22%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDVAGVVEKVGSQV 79
            V++   R  +VL+++ A  +   D        S  D    P + G++ AG+VE VG  V
Sbjct: 19  EVDLDPPRAGEVLVRITATGVCHTD----AHTLSGDDPEGFPAVLGHEGAGIVEAVGEGV 74

Query: 80  KKFKVGDEV--------------------YGD-------------------INEKALDHP 100
              K GD V                      +                    N   + H 
Sbjct: 75  TSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHY 134

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGG 159
               + AEYT V E  L     +    +A  L     T    +  +A    G ++ V G 
Sbjct: 135 LGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG- 193

Query: 160 AGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGA-----DLAIDYTKENIEDL-P 212
            GGVG   IQ AK   GA ++ A   +  KL+L +  GA        +D   E I +L  
Sbjct: 194 LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTD 252

Query: 213 EKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTP------PASSFVL--TSDGSIL 261
              D  F+ VG      +AL+A   GG  V IIG               V      GS  
Sbjct: 253 GGADYAFECVGNVEVMRQALEATHRGGTSV-IIGVAGAGQEISTRPFQLVTGRVWKGSAF 311

Query: 262 EKLNP---------YFESGKVKAIIDP--KGPFPFSQTLEAFSHLESSRATGKVVIH 307
               P          + +GK+   +D       P     EAF  +   ++   V+  
Sbjct: 312 GGARPRSDIPRLVDLYMAGKLP--LDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366

Length = 366

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 75/278 (26%), Positives = 104/278 (37%), Gaps = 63/278 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-- 79
           V +P L    VL++V  A +   D   + G       PLP I G++  G V  +G  V  
Sbjct: 18  VPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTT 75

Query: 80  ----KKFKVGDEV---------------------------YGDINEKALDHPKRNGSLAE 108
               +  KVGD V                           YG   E + D P  +G  AE
Sbjct: 76  DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGH--EASCDDPHLSGGYAE 133

Query: 109 YTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVLGGAGGVGTM 166
           +  +      ++ P N+    AA    A  T    L+R     AG +++V G AG +G  
Sbjct: 134 HIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLY 192

Query: 167 VIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEK---------FD 216
            +  AK   GA +V     S  +L+L R  GAD  ID  +                   D
Sbjct: 193 AVAAAKL-AGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGAD 251

Query: 217 VVFDAVGQCDKALKAVKE-------GGRVVSIIGSVTP 247
           VV +A G       AV E       GG  V ++GSV P
Sbjct: 252 VVIEASG----HPAAVPEGLELLRRGGTYV-LVGSVAP 284

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 74.5 bits (183), Expect = 4e-15
 Identities = 91/353 (25%), Positives = 135/353 (38%), Gaps = 79/353 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP----------LPTIPGYDVAGV 71
           V VP+L+ D++LI+V A  +   D          TD             P + G++ +GV
Sbjct: 44  VPVPNLKPDEILIRVKACGICGSDIH-----LYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 72  VEKVGSQVKKFKVGDEVYGD---------------------INEKALDHPKRNGSLAEYT 110
           VEK G  VK F+ GD V  +                     + E        +G+ AEY 
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSA---DGAFAEYI 155

Query: 111 AVEE-------NLLALKPKNLSFVEAASLPLATETAYEGL-ERSA-FSAGKSILVLGGAG 161
           AV          L  +  ++ +F EA +L   T  AY GL  R   F  G  ++V G AG
Sbjct: 156 AVNARYAWEINELREIYSEDKAF-EAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AG 213

Query: 162 GVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKF----- 215
            +G   I LAK   GASKV A   S  + +L + +GAD   + TK       EK      
Sbjct: 214 PIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTK 272

Query: 216 ----DVVFDAVGQCDKALKAVKE----GGRVVSIIGSVTPPASSF---------VLTSDG 258
               D+  +A G     +  +++     G++V I  + T               ++ + G
Sbjct: 273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQG 332

Query: 259 ----SILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
                I   +     SGK+         FP    +EA     S R  GK+ I 
Sbjct: 333 HSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIK-AASERTDGKITIL 384

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 73.5 bits (181), Expect = 7e-15
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 32/208 (15%)

Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN------ 103
           I G++  G+V++VG  V   KVGD V             Y     + L    +N      
Sbjct: 56  ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVD 115

Query: 104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
           G +AE   V  +     P+ L   +A+S+  A  T Y+ ++ S    G+ I + G AGG+
Sbjct: 116 GGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYG-AGGL 174

Query: 164 GTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD------- 216
           G + +Q AK+VF A  +A   +  KL L + +GADL I+  +   ED+ +          
Sbjct: 175 GNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRV--EDVAKIIQEKTGGAH 232

Query: 217 -VVFDAVGQC--DKALKAVKEGGRVVSI 241
             V  AV +   ++A+ AV+ GGRVV++
Sbjct: 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAV 260

Length = 338

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 26/231 (11%)

Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL----PTIPGYDVAGVVEKVGSQVKKF 82
           L E  VLI+V  +++N  D     G  S     +    P IPG D+AG V  V S   +F
Sbjct: 25  LPEGDVLIRVAYSSVNYKD-----GLASIPGGKIVKRYPFIPGIDLAGTV--VESNDPRF 77

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA--- 139
           K GDEV     +  + H   +G  +EY  V    +   PK L+  EA  L  A  TA   
Sbjct: 78  KPGDEVIVTSYDLGVSH---HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS 134

Query: 140 YEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD 198
              LE +  +     +LV G  GGVG++ + +   + G   VA+T      D L+ LGA 
Sbjct: 135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAK 193

Query: 199 LAI---DYTKENIEDL-PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIG 243
             I   +  +E+I+ L  +++    D VG       L  ++ GG  V++ G
Sbjct: 194 EVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGG-SVAVSG 243

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)

Query: 24  VPSLREDQVLIKVVAAALNPID---FKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
           +P L    V +++ A  +   D    K M    F   +   P + G++ AG++E+VGS+V
Sbjct: 36  LPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKE---PMVIGHECAGIIEEVGSEV 92

Query: 80  KKFKVGDEVY---------------GDIN----EKALDHPKRNGSLAEYTAVEENLLALK 120
           K   VGD V                G  N     K    P  +GSLA       +L    
Sbjct: 93  KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152

Query: 121 PKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+N+S  E A   PL+         R+      ++LV+ GAG +G +V  LA   FGA +
Sbjct: 153 PENVSLEEGAMCEPLS--VGVHACRRANIGPETNVLVM-GAGPIG-LVTMLAARAFGAPR 208

Query: 180 VAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEK-----------FDVVFDAVG---Q 224
           +        +L + + LGAD  +  +  NIED+  +            DV FD VG    
Sbjct: 209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKT 267

Query: 225 CDKALKAVKEGGRV 238
              AL+A + GG+V
Sbjct: 268 MSTALEATRAGGKV 281

Length = 364

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 74/274 (27%), Positives = 107/274 (39%), Gaps = 46/274 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVA---------AALNPIDFKRMLG 51
           M+A V++        L     V  P     QVL+KV+A         A  +P       G
Sbjct: 1   MRAAVFR-----DGPLVVRD-VPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAG 54

Query: 52  AFSATDSPLPTIPGYDVAGVVEKVGSQV-KKFKVGDEV---------YGDINEKALDHPK 101
             S  D     + G++  G V   G    +K KVG  V          G      L  P+
Sbjct: 55  GPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGL-SPE 113

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASL--PLATETAYEGLERSAFSAGKSILVLGG 159
             G  AEY  + E LL   P  LS +E A+L  PLA       + R+  + G+  LV+ G
Sbjct: 114 APGGYAEYMLLSEALLLRVPDGLS-MEDAALTEPLA--VGLHAVRRARLTPGEVALVI-G 169

Query: 160 AGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAID------YTKENIED-- 210
            G +G  VI   K   G    VA+  S  +  L  ++GAD+ +D      +     E   
Sbjct: 170 CGPIGLAVIAALK-ARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELAR 228

Query: 211 -LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVS 240
               K  V+F+ VG      + ++    GGR+V 
Sbjct: 229 AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVV 262

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 64.7 bits (158), Expect = 9e-12
 Identities = 77/295 (26%), Positives = 111/295 (37%), Gaps = 62/295 (21%)

Query: 1   MKAWVYKE------YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS 54
           M+A V +E      Y +S+  L  E  VE+      +VL+K+ AA L   D   + G   
Sbjct: 1   MRAAVLRETGAPTPYADSRP-LVIEE-VELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP 58

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV------------YGDINEKALDHP-- 100
               PLP   G++ AGVV +VG  V   +VGD V                   AL  P  
Sbjct: 59  ---RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115

Query: 101 ----------------KRNGSL---------AEYTAVEENLLALKPKNLSFVEAASLPLA 135
                            R G +         AEY  V    +    K++    AA    A
Sbjct: 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175

Query: 136 TETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLR 193
             T    +  +A    G+S+ V+ G GGVG   + L     GAS+V A   +  KL L R
Sbjct: 176 VLTGVGAVVNTAGVRPGQSVAVV-GLGGVGLSAL-LGAVAAGASQVVAVDLNEDKLALAR 233

Query: 194 SLGADLAIDYTKENIEDLPEKF-----DVVFDAVGQC---DKALKAVKEGGRVVS 240
            LGA   ++    N  +   +      D  F+  G     + A +  + GG  V+
Sbjct: 234 ELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVT 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 94/362 (25%), Positives = 139/362 (38%), Gaps = 84/362 (23%)

Query: 2   KAWVYKEY---GNSQSVLKFETN---VEVPSLREDQVLIKVVAAALNPIDFKRM----LG 51
           K  + K Y      +S L+  T    ++VP      VL+K +  + +P    RM      
Sbjct: 4   KQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS 63

Query: 52  AFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTA 111
            +     P   I GY VA VV+   S    FKVGD V+G                  +T 
Sbjct: 64  LYLPPFKPGEVITGYGVAKVVD---SGNPDFKVGDLVWG------------------FTG 102

Query: 112 VEENLLALKPKNLSFVEAASLPLATE---------TAYEGL-ERSAFSAGKSILVLGGAG 161
            EE  L  + ++L  ++   +PL+           TAY G  E      G+++ V   +G
Sbjct: 103 WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASG 162

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED------LPEK 214
            VG +V QLAK + G   V +  S  K+DLL++ LG D A +Y +E   D       P  
Sbjct: 163 AVGQLVGQLAK-LKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNG 221

Query: 215 FDVVFDAVG--QCDKALKAVKEGGRVV-------------------SIIGSVTPPASSFV 253
            D+ FD VG    D  L  +   GR+                      I         F+
Sbjct: 222 IDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFL 281

Query: 254 ----LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLE----AFSHLESSRATGKVV 305
               L      LE+++ Y + GK+K + D       +  LE    AF  L +    GK V
Sbjct: 282 VGDYLHRYPEFLEEMSGYIKEGKLKYVED------IADGLESAPEAFVGLFTGSNIGKQV 335

Query: 306 IH 307
           + 
Sbjct: 336 VK 337

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 63.3 bits (154), Expect = 3e-11
 Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 42/232 (18%)

Query: 26  SLRE---DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           +LR+   + V+IKV+   +   D  ++      ++ P+  +PG++V G V +VGS V KF
Sbjct: 28  TLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPM--VPGHEVVGEVVEVGSDVSKF 85

Query: 83  KVGDEV-----------------------------YGDINEKALDHPKRNGSLAEYTAVE 113
            VGD V                             Y D+     D     G  A    V+
Sbjct: 86  TVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYT---DGKPTQGGFASAMVVD 142

Query: 114 ENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG--GAGGVGTMVIQLA 171
           +  +   P+ ++  +AA L  A  T Y  L  S F   +S L  G  G GGVG M +++A
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPL--SHFGLKQSGLRGGILGLGGVGHMGVKIA 200

Query: 172 KHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAV 222
           K +     V ++S   + + L  LGAD   +      +++  +  D + D V
Sbjct: 201 KAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTV 252

Length = 357

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 85/359 (23%), Positives = 137/359 (38%), Gaps = 90/359 (25%)

Query: 17  KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS----ATDSPL---PTIPGYDVA 69
           + E  V VP     ++L+KV A  +   D K   GA S        P    P IPG++  
Sbjct: 13  RLEE-VPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFV 71

Query: 70  GVVEKVGSQVKK--FKVGDEV---------------------------YGDINEKALDHP 100
           G V ++G   ++   KVGD V                           YG  N       
Sbjct: 72  GRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNV----- 126

Query: 101 KRNGSLAEYTAVEENLLALK-PKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLG 158
             NG +AEY    +  +  K P ++   +A  + PLA   A   ++R+       ++VL 
Sbjct: 127 --NGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLAC--ALHAVDRANIKFD-DVVVLA 181

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN----IEDLPEK 214
           GAG +G  +I  A+       +       +L L R  GAD+ ++  + +    I++L   
Sbjct: 182 GAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGG 241

Query: 215 F--DVVFDAVGQ---CDKALKAVKEGGRVV--SIIGSVTPPASSFVLTSDGSIL------ 261
           +  D+  +A G     ++ L  +++ GR V  S+ G           T D SI+      
Sbjct: 242 YGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPV--------TVDWSIIGDRKEL 293

Query: 262 ----EKLNPY--------FESGKV--KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                 L PY          SG++    I+  +  FP     EAF  +     + KVV+
Sbjct: 294 DVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQ--FPLEDFEEAFELMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 72/264 (27%), Positives = 105/264 (39%), Gaps = 51/264 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA VY   GN  +V     +V  P +      ++++   A+   D     G   A    
Sbjct: 1   MKAVVYGGPGNV-AV----EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA---E 52

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVY--------GDINEKALD-------HPKRNG 104
              + G++  G VE+VGS V+  KVGD V            N K          +P R G
Sbjct: 53  PGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG 112

Query: 105 SL-------------AEYTAV---EENLLALKPKNLSFVEAASLPLATE--TAYEGLERS 146
                          AEY  V   + NLL L  ++ +  +   L L+    T + GLE +
Sbjct: 113 GAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELA 172

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAIDYTK 205
               G ++ V  GAG VG M    A  + GAS+V        +LDL  S+GA + ID++ 
Sbjct: 173 GVQPGDTVAVF-GAGPVGLMAAYSAI-LRGASRVYVVDHVPERLDLAESIGA-IPIDFSD 229

Query: 206 EN-----IEDLPEKFDVVFDAVGQ 224
            +     +   P   D   D VG 
Sbjct: 230 GDPVEQILGLEPGGVDRAVDCVGY 253

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 25/230 (10%)

Query: 25  PSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGVVEKVGSQVKKF 82
             L E QVL++ +  +++P    RM    + TD  +P       D  GV     S+ +KF
Sbjct: 32  DELNEGQVLVRTLYLSVDPYMRCRM-NEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKF 90

Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLS-FVEAASLPLATETAYE 141
            VGD V       + + P +  ++ + +++E+    L   +LS F+ A  LP    TA  
Sbjct: 91  AVGDIV------TSFNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGL--TALI 142

Query: 142 GLERSAF---SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRS-LG 196
           G++        A ++++V G AG  G++  Q+   + G S+V     S  K  LL+S LG
Sbjct: 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIG-RLLGCSRVVGICGSDEKCQLLKSELG 201

Query: 197 ADLAIDYTKENI-----EDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
            D AI+Y  +N+     E  PE  DV FD VG    D  +  + E   ++
Sbjct: 202 FDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHII 251

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 58.0 bits (140), Expect = 1e-09
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI--------------------------NE 94
           P +PG+++ G+V K+G  VKKFK GD V   +                          N 
Sbjct: 67  PIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNS 126

Query: 95  KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSI 154
              D  K  G  ++   V+++ +   P NL     A L  A  T Y  ++    +     
Sbjct: 127 IGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKH 186

Query: 155 LVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGAD 198
           L + G GG+G + +++ K  FG    V ++SS  + + +  LGAD
Sbjct: 187 LGVAGLGGLGHVAVKIGK-AFGLKVTVISSSSNKEDEAINRLGAD 230

Length = 360

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 73/299 (24%), Positives = 114/299 (38%), Gaps = 65/299 (21%)

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV------------------YGDINEKA--LDHPK 101
            I G++  GVVE+VGS V  FKVGD V                  Y         L +  
Sbjct: 56  RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGN-L 114

Query: 102 RNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYE-GLERSAFSAGKSILVLG 158
            +G+ AEY  +   +N L   P+ +    A  L     T YE G+       G ++ ++G
Sbjct: 115 IDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVG 174

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------P 212
            AG VG   +  A+    +  +       +L++ + LGA   ++  K +  +        
Sbjct: 175 -AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDG 233

Query: 213 EKFDVVFDAVG---QCDKALKAVKEGGRVVSIIGSVTPPA---------------SSFVL 254
              DVV +AVG     +   + V  GG + + +G    P                +  V 
Sbjct: 234 RGVDVVIEAVGIPATFELCQELVAPGGHIAN-VGVHGKPVDLHLEKLWIKNITITTGLVD 292

Query: 255 TSDGSILEKLNPYFESGKVKAIIDPKG----PFPFSQTLEA---FSHLESSRATGKVVI 306
           T+   +L KL     SGK    +DP       F  S+  +A   FS     +A  KV+I
Sbjct: 293 TNTTPMLLKL---VSSGK----LDPSKLVTHRFKLSEIEKAYDTFSAAAKHKAL-KVII 343

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 89/387 (22%), Positives = 133/387 (34%), Gaps = 115/387 (29%)

Query: 21  NVEVPSLREDQ-VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
            V  P + +    +++V A A+   D     G           I G++  GVVE+VG +V
Sbjct: 16  EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKG--DILGHEFMGVVEEVGPEV 73

Query: 80  KKFKVGDEV------------------YG---DINEKALDHPKR---------------- 102
           +  KVGD V                  Y    + N  A                      
Sbjct: 74  RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGG 133

Query: 103 -NGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
             G  AEY  V   +     + P +LS  +A  L     T Y   E +    G ++ V  
Sbjct: 134 YAGGQAEYVRVPFADVGPFKI-PDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVW- 191

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF-- 215
           G G VG    + AK   GA +V A      +L++ RS      I++ +   +D+ E    
Sbjct: 192 GCGPVGLFAARSAKL-LGAERVIAIDRVPERLEMARSHLGAETINFEEV--DDVVEALRE 248

Query: 216 -------DVVFDAVG------------------QCDK------ALKAVKEGGRVVSIIGS 244
                  DV  DAVG                  + D+      A++AV++GG  VSIIG 
Sbjct: 249 LTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT-VSIIGV 307

Query: 245 VTPPASSFVLTSDGSILEK-----------------LNPYFESGKVKAIIDPKG----PF 283
                + F +   G+ + K                 L    ESG+    +DP        
Sbjct: 308 YGGTVNKFPI---GAAMNKGLTLRMGQTHVQRYLPRLLELIESGE----LDPSFIITHRL 360

Query: 284 PFSQTLEAFSHLESSRATG--KVVIHP 308
           P     EA+      +  G  KVV+ P
Sbjct: 361 PLEDAPEAYKIF-DKKEDGCIKVVLKP 386

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 55.6 bits (134), Expect = 8e-09
 Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 41/214 (19%)

Query: 15  VLKFETNVEV-----PSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV 68
           V   +  V V     P ++ +D VL+KV ++ L   D  R+   F       P   G++ 
Sbjct: 5   VNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRI---FKNGAHYYPITLGHEF 61

Query: 69  AGVVEKVGSQVKKFKVGDEV------------------YGDINEKALDHPKRNGSLAEYT 110
           +G VE VGS V     GD V                  Y    +      +R+G  AEY 
Sbjct: 62  SGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYI 121

Query: 111 AVEE-NLLALKP----KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGT 165
            V+  NL AL      ++ +F+E  ++ L      +G E      GK+++++G AG +G 
Sbjct: 122 VVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE------GKNVIIIG-AGTIGL 174

Query: 166 MVIQLAKHVFGASKVAATS-STAKLDLLRSLGAD 198
           + IQ A    GA  V A   ++ KL L +SLGA 
Sbjct: 175 LAIQCAV-ALGAKSVTAIDINSEKLALAKSLGAM 207

Length = 347

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 55.6 bits (135), Expect = 8e-09
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 21 NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
          +VE+   R D+VL+++VA  +   D   ++       +PLP + G++ AGVVE VGS V 
Sbjct: 19 DVELDDPRPDEVLVRIVATGICHTD---LVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVT 75

Query: 81 KFKVGDEV 88
            K GD V
Sbjct: 76 GLKPGDHV 83

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V+ ++G+   VL+    V  P+    +VL++   + ++  D   + G +      L
Sbjct: 1   MRAAVHTQFGDPADVLE-IGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTY-GYKPEL 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G +  GVV+ VG  VK  +VG  V           P   G+ AEY     + L   
Sbjct: 59  PAIGGSEAVGVVDAVGEGVKGLQVGQRVAV--------APVH-GTWAEYFVAPADGLVPL 109

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           P  +S   AA L     +A   L+      G+ ++     G VG +V  LA 
Sbjct: 110 PDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAA 161

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 74/298 (24%), Positives = 107/298 (35%), Gaps = 61/298 (20%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KA V  E G    +   E  V  P   E  V IK++A ++   D   + G  +   +  P
Sbjct: 4   KAAVAWEAGKPLVIE--EIEVAPPKANE--VRIKMLATSVCHTDILAIEGFKA---TLFP 56

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVY-----------------------GDINEKAL- 97
            I G++ AG+VE VG  V   K GD+V                           NE  L 
Sbjct: 57  VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116

Query: 98  -DHPKR-------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
            D   R               + ++YT V+EN +A             L     T Y   
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAA 176

Query: 144 ERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAI 201
             +A    G ++ V  G G VG   I  AK + GAS++        K +  +  GA   I
Sbjct: 177 WNTAKVEPGSTVAVF-GLGAVGLSAIMGAK-IAGASRIIGVDINEDKFEKAKEFGATDFI 234

Query: 202 ---DYTKENIEDLPEKFDVVFDAVGQC-------DKALKAVKEGGRVVSIIGSVTPPA 249
              D  K   E + E      D   +C       ++AL++ K G  V  ++G   PP 
Sbjct: 235 NPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVG--VPPG 290

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 82/286 (28%), Positives = 123/286 (43%), Gaps = 55/286 (19%)

Query: 61  PTIPGYDVAG--VVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
           P +PG  + G  V + V S    FK GD + G    +     + + +      +++++  
Sbjct: 73  PFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQLQDDI-- 130

Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
                LS+     L +A  TAY G  E  +   G S+ V   +G VG +V QLAK + G 
Sbjct: 131 ----PLSY-HLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK-LHGC 184

Query: 178 SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKA 228
             V +  S+ K+DLL++ LG D A +Y +E   D       PE  D+ FD VG    D A
Sbjct: 185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAA 244

Query: 229 LKAVKEGGRVVSIIGSVTPPASSF-------------------VLTSD-----GSILEKL 264
           L  +K  GR +++ G V+  + S                     L SD        LE +
Sbjct: 245 LLNMKIHGR-IAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV 303

Query: 265 NPYFESGKVKAIIDPKGPFPFSQTLE----AFSHLESSRATGKVVI 306
           + Y++ GK+  I D       S+ LE    A   L S +  GK VI
Sbjct: 304 SRYYKQGKIVYIED------MSEGLESAPAALVGLFSGKNVGKQVI 343

Length = 348

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 52.7 bits (126), Expect = 7e-08
 Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 11/118 (9%)

Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G   V A  S  K+  L+ LG
Sbjct: 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAAGSDEKVAYLKKLG 183

Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+A +Y T +++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 184 FDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 240

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 30/194 (15%)

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGD--------------------------EVYGD 91
           S  P IPG+++ G+  KVG  V KFK GD                          +V   
Sbjct: 58  SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFT 117

Query: 92  INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFS-- 149
            N ++ D  +  G  ++   V+   +   P  L     A L  A  T Y  ++    +  
Sbjct: 118 YNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 177

Query: 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENI 208
           +GK + V  G GG+G + +++ K       V + SS  + + +  LGAD   +    + +
Sbjct: 178 SGKRLGV-NGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKM 236

Query: 209 EDLPEKFDVVFDAV 222
           ++     D + D V
Sbjct: 237 KEAVGTMDFIIDTV 250

Length = 375

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 61/286 (21%), Positives = 103/286 (36%), Gaps = 59/286 (20%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD-------VAGVVE 73
           ++  P     +VL++ +   +   D  R + A     +P    PG D         GVVE
Sbjct: 17  DIPEPEPTPGEVLVRTLEVGVCGTD--REIVAGEYGTAP----PGEDFLVLGHEALGVVE 70

Query: 74  KVGSQVKKFKVGDEVY-------GDINEKALDHP--------------KRNGSLAEYTAV 112
           +VG        GD V        G      +  P                +G + EY   
Sbjct: 71  EVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVD 129

Query: 113 EENLLALKPKNLSFVEAASL--PL-----ATETAYEGLERSAFSAGKSILVLGGAGGVG- 164
           +   L   P +L+  +   L  PL     A E A    +R      +  LVLG AG +G 
Sbjct: 130 DPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGL 186

Query: 165 --TMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED--LPEKFDVVF 219
              +++      V+  ++       A  D++  LGA   ++ +K  + +  L  +FD++ 
Sbjct: 187 LAALLLRLRGFEVYVLNRRDPPDPKA--DIVEELGATY-VNSSKTPVAEVKLVGEFDLII 243

Query: 220 DAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILE 262
           +A G      +AL A+   G  V I+  V      F +       +
Sbjct: 244 EATGVPPLAFEALPALAPNG--VVILFGVPGGGREFEVDGGELNRD 287

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 74/316 (23%), Positives = 113/316 (35%), Gaps = 77/316 (24%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           KA V    G    V      +E+   +  +VL+K+VA+ L   D   + G     D P  
Sbjct: 3   KAAVLWGPGQPWEV----EEIELDDPKAGEVLVKLVASGLCHSDEHLVTG-----DLPMP 53

Query: 60  -LPTIPGYDVAGVVEKVGSQVKKFKV--------------------GDEVYGDINEKALD 98
             P + G++ AGVV KVG  V   K                     G +   D+    L 
Sbjct: 54  RYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLT 113

Query: 99  HPKRN-------------------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA 139
             + +                   G+ +EYT V E  +     ++   +A  +     T 
Sbjct: 114 GSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTG 173

Query: 140 YEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGA 197
           +      A    G +++V+G  GGVG   +Q A    GA KV A      K +     GA
Sbjct: 174 WGSAVNIADVRPGDTVVVMG-IGGVGINAVQGAAVA-GARKVIAVDPVEFKREQALKFGA 231

Query: 198 DLAIDYTKENIEDLPEKF---------DVVFDAVGQCD-----KALKAVKEGGRVV---- 239
             A      ++E+  +           D     VG+ D     +AL A ++GGRVV    
Sbjct: 232 THAF----ASMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGL 287

Query: 240 SIIGSVTPPASSFVLT 255
             +  V    + F LT
Sbjct: 288 GPMADVDVKVNLFELT 303

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 22 VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
          +EV   +  +V IK+VA  +   D   + G      +P P I G++ AG+VE VG  V  
Sbjct: 25 IEVAPPKAHEVRIKIVATGICRSDDHVVSGKL---VTPFPVILGHEAAGIVESVGEGVTT 81

Query: 82 FKVGDEV 88
           K GD+V
Sbjct: 82 VKPGDKV 88

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 71/276 (25%), Positives = 110/276 (39%), Gaps = 57/276 (20%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           E +VE+P  ++ +VL+++VA  +   D   + GA    +   P I G++ AG+VE VG  
Sbjct: 18  EVDVEMP--QKGEVLVRIVATGVCHTDAFTLSGA--DPEGVFPVILGHEGAGIVEAVGEG 73

Query: 79  VKKFKVGDEVYG---------------------------------------DINEKALDH 99
           V   KVGD V                                           + + + H
Sbjct: 74  VTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYH 133

Query: 100 PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLG 158
                + +EYT V E  LA         E   L     T    +  +A    G ++ V  
Sbjct: 134 YMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVF- 192

Query: 159 GAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAI---DYTK---ENIEDL 211
           G GG+G  VIQ A+    AS++ A   + AK +L + LGA   +   DY K   E I ++
Sbjct: 193 GLGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEI 251

Query: 212 PE-KFDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
            +   D  F+ +G  +    AL+   +G     IIG
Sbjct: 252 TDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIG 287

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 46.4 bits (110), Expect = 8e-06
 Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 38/226 (16%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATDSPLPTIPGYDVAGVVEKV 75
           +T VE+P L    V++KV    +   D    L  +     T+  LP   G++++G V + 
Sbjct: 13  KTRVEIPELGAGDVVVKVAGCGVCHTD----LSYYYMGVRTNHALPLALGHEISGRVIQA 68

Query: 76  GSQVKKFKVGDEV-----------------YGDI-NEKALDHPKRNGSLAEYTAVEENLL 117
           G+    + +G  V                  G I   + +      G  A +  V    L
Sbjct: 69  GAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGL 127

Query: 118 ALKPKNLSFVEAASLPL--------ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQ 169
                + + + AA LPL        A  T Y+   ++    G  ++V+G AGGVG  ++Q
Sbjct: 128 C--VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIG-AGGVGGYMVQ 184

Query: 170 LAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF 215
            AK   GA+ VA      KL++++  GADL ++   ++  ++ +  
Sbjct: 185 TAK-AMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLI 229

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 43/241 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MK   ++ YG  +  L+ E   E+P + +D++L++V++ +L    +K    A   +D   
Sbjct: 1   MKTKAWRMYG--KGDLRLEKF-ELPEIADDEILVRVISDSLCFSTWKL---ALQGSDHKK 54

Query: 61  --------PTIPGYDVAGVVEKVGSQVK-KFKVGDE--VYGDINEK-ALDHP----KRNG 104
                   P I G++ AG + KVG + + K+K G    +   +        P       G
Sbjct: 55  VPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPG 114

Query: 105 SLAEYTAVEENLLA----LKPKNLSFVEAASL-PLA------------TETAYEGLERSA 147
            LA Y  +   ++     L  +   + EA+ + PL+                Y    R  
Sbjct: 115 GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYR--HRMG 172

Query: 148 FSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATS-STAKLDLLRSLGADLAIDYTK 205
              G +  +LGGAG +G M I  A H   G S +  T  +  +L   + L    A     
Sbjct: 173 IKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGI 232

Query: 206 E 206
           E
Sbjct: 233 E 233

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 7e-05
 Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 35/211 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE--------KAL 97
           P + G++V G +    S     K G  V                 + N+         A+
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAM 117

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSF-VEAASLPLATETAYEGLERSAFSAGKSILV 156
             P  +G    Y  V+       P+     V A + PLA   A     ++    GK + V
Sbjct: 118 YFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAV--AIHAAHQAGDLQGKRVFV 175

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-- 214
            G  G +G +++   K +  A  V A  S   L L R +GAD  ++   ++++    +  
Sbjct: 176 SG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKG 234

Query: 215 -FDVVFDAVGQCD---KALKAVKEGGRVVSI 241
            FDV F+  G        L+  +  G +V +
Sbjct: 235 YFDVSFEVSGHPSSINTCLEVTRAKGVMVQV 265

Length = 343

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 43.4 bits (102), Expect = 8e-05
 Identities = 73/272 (26%), Positives = 102/272 (37%), Gaps = 36/272 (13%)

Query: 3   AWVYKEYGNSQS-VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           AW  +  G  +   L+F     VP     ++L++V A  +   D     G        + 
Sbjct: 1   AWEVERPGPIEDGPLRFVER-PVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRV- 58

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKR------ 102
             PG++V G V   G+    F VGD V             Y     + L    R      
Sbjct: 59  -TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDT 117

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
           +G  AEYT V        P     VE A L  A    Y  L R++   G   L L G GG
Sbjct: 118 DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPG-GRLGLYGFGG 176

Query: 163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD--VVFD 220
              +  Q+A    GA+    T   A   L  +LGA  A        +  PE  D  ++F 
Sbjct: 177 SAHLTAQVAL-AQGATVHVMTRGAAARRLALALGAASAGGAY----DTPPEPLDAAILFA 231

Query: 221 AVGQ-CDKALKAVKEGGRVVSIIG---SVTPP 248
             G     AL+A+  GG V+++ G   + TPP
Sbjct: 232 PAGGLVPPALEALDRGG-VLAVAGIHLTDTPP 262

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 43.3 bits (102), Expect = 9e-05
 Identities = 73/272 (26%), Positives = 105/272 (38%), Gaps = 52/272 (19%)

Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV 79
             + VP     +V++ + A  +   D     G  +      P + G++ AGVVE VG  V
Sbjct: 17  ETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGV 73

Query: 80  KKFKVGDEVYGDINEKAL---------DHPK-----RNGS----LAEYTAVEENL--LAL 119
                GD V   +N +A+           P       N +    L + T +   L   A 
Sbjct: 74  TDVAPGDYVV--LNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAF 131

Query: 120 KPKNLSFV-EAASLPLATETAYEGLERSAFSAG-------------KSILVLGGAGGVGT 165
             K L    +   +  A + A  GL      AG              S+ V+G  GGVG 
Sbjct: 132 AEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGD 190

Query: 166 MVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTK----ENIEDLPEKF--DVV 218
             I  A  + GASK+ A      KL+  R  GA   ++ +     E I  L   F  DVV
Sbjct: 191 AAIAGAA-LAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVV 249

Query: 219 FDAVGQCD---KALKAVKEGGRVVSIIGSVTP 247
            DAVG+ +   +A  A    G VV ++G  TP
Sbjct: 250 IDAVGRPETYKQAFYARDLAGTVV-LVGVPTP 280

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 72/278 (25%), Positives = 101/278 (36%), Gaps = 63/278 (22%)

Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQ 78
            VEV   +  +V IK++A  +   D   + GA    D     P I G++ AG+VE VG  
Sbjct: 19  EVEVAPPKAGEVRIKILATGVCHTDAYTLSGA----DPEGLFPVILGHEGAGIVESVGEG 74

Query: 79  VKKFKVGDEV---YGDINE----KALDHPKRN---------------------------- 103
           V   K GD V   Y    E    K     K N                            
Sbjct: 75  VTSVKPGDHVIPLY--TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPI 132

Query: 104 ------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILV 156
                  + +EYT V E  +A         +   L     T Y  +  +A    G ++ V
Sbjct: 133 YHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAV 192

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAI---DYTKENIEDLP 212
             G G VG  VIQ AK   GAS++     +  K +L +  GA   +   D+ K   + L 
Sbjct: 193 F-GLGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLV 250

Query: 213 EK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIG 243
           E      D  F+ +G       AL+A  +G     IIG
Sbjct: 251 EMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIG 288

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 31/190 (16%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------YGDINEKALDHPKRNGSLAEYTAVE 113
           P +PGY+  G V + G     F+ GD V       Y D+        KR  + A      
Sbjct: 59  PLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL 117

Query: 114 ENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
           +   AL P      + A L LA  TA   +   A       L++ G G +G ++ +L K 
Sbjct: 118 DP--ALGP------QGALLALAA-TARHAVA-GAEVKVLPDLIV-GHGTLGRLLARLTK- 165

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFDAVGQ---CDKAL 229
             G S  A   +  +         D A  Y   + E  P + +  ++DA G     D  +
Sbjct: 166 AAGGSPPAVWETNPRR-------RDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLV 218

Query: 230 KAVKEGGRVV 239
           + + +GG +V
Sbjct: 219 RRLAKGGEIV 228

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 40/221 (18%)

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-INEKALDHP-----------------KR 102
           P + G++  GV++ VG  V   ++G+ V  D +      +P                  R
Sbjct: 54  PRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHR 113

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKS------ILV 156
           +G  +EY  V        P   +     ++        E    +A   G++      + +
Sbjct: 114 DGGFSEYAVV--------PAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVAL 165

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPEKF 215
           + GAG VG  ++Q+ K V+    V        +L L +  GAD  I+  +E + +  E+ 
Sbjct: 166 IYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEK 225

Query: 216 DV----VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA 249
            +    + DA       ++A+       R+V +  S  P  
Sbjct: 226 GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSE 266

Length = 339

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)

Query: 9  YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV 68
          +G  ++++  E  V  P   E  + IKVV+ +L   D    L A+ +  +  P I G++ 
Sbjct: 19 WGAGEALVMEEVEVSPPQPLE--IRIKVVSTSLCRSD----LSAWESQ-ALFPRIFGHEA 71

Query: 69 AGVVEKVGSQVKKFKVGDEV 88
          +G+VE +G  V +F+ GD V
Sbjct: 72 SGIVESIGEGVTEFEKGDHV 91

Length = 378

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.98
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.97
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.95
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.74
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.31
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.16
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.14
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.0
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.34
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.31
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.16
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.11
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.98
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.92
PLN02494	477	adenosylhomocysteinase	97.82
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.72
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.68
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.65
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.6
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.48
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.42
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.38
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.37
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.35
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.29
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.27
PRK08324	681	short chain dehydrogenase; Validated	97.22
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.18
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.14
PRK14967	223	putative methyltransferase; Provisional	97.11
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.09
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.99
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.98
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.96
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.95
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.93
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.91
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.91
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.79
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.73
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.73
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.67
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.64
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.62
PRK12742	237	oxidoreductase; Provisional	96.57
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.47
PRK07574	385	formate dehydrogenase; Provisional	96.38
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.38
PRK05872	296	short chain dehydrogenase; Provisional	96.35
PLN03209	576	translocon at the inner envelope of chloroplast su	96.33
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.32
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.25
PRK08317	241	hypothetical protein; Provisional	96.25
PLN03139	386	formate dehydrogenase; Provisional	96.25
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.19
PRK07060	245	short chain dehydrogenase; Provisional	96.16
PRK06139	330	short chain dehydrogenase; Provisional	96.15
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.15
PRK05693	274	short chain dehydrogenase; Provisional	96.13
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.13
PRK06182	273	short chain dehydrogenase; Validated	96.1
PRK05993	277	short chain dehydrogenase; Provisional	96.1
PRK06057	255	short chain dehydrogenase; Provisional	96.05
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.03
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.02
PRK06949	258	short chain dehydrogenase; Provisional	96.0
PRK07825	273	short chain dehydrogenase; Provisional	95.99
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.95
PRK04148	134	hypothetical protein; Provisional	95.91
PRK06196	315	oxidoreductase; Provisional	95.9
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.84
COG2910	211	Putative NADH-flavin reductase [General function p	95.84
PRK12367	245	short chain dehydrogenase; Provisional	95.83
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.83
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	95.8
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.77
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.74
PRK08177	225	short chain dehydrogenase; Provisional	95.72
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.71
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.71
PLN02928	347	oxidoreductase family protein	95.66
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.65
PRK05866	293	short chain dehydrogenase; Provisional	95.65
PRK07814	263	short chain dehydrogenase; Provisional	95.65
CHL00194	317	ycf39 Ycf39; Provisional	95.64
PRK13243	333	glyoxylate reductase; Reviewed	95.61
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.59
PRK12829	264	short chain dehydrogenase; Provisional	95.57
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.53
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.52
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.49
PRK07326	237	short chain dehydrogenase; Provisional	95.49
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.47
PRK06500	249	short chain dehydrogenase; Provisional	95.47
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.42
PRK08618	325	ornithine cyclodeaminase; Validated	95.36
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.36
PRK07677	252	short chain dehydrogenase; Provisional	95.34
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	95.32
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.31
PRK05867	253	short chain dehydrogenase; Provisional	95.29
PRK06180	277	short chain dehydrogenase; Provisional	95.29
PRK09291	257	short chain dehydrogenase; Provisional	95.29
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.25
PRK07831	262	short chain dehydrogenase; Provisional	95.25
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.22
PRK08265	261	short chain dehydrogenase; Provisional	95.21
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.17
PRK07806	248	short chain dehydrogenase; Provisional	95.17
PLN02244	340	tocopherol O-methyltransferase	95.14
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.11
PRK07478	254	short chain dehydrogenase; Provisional	95.06
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.05
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.05
PRK09072	263	short chain dehydrogenase; Provisional	95.04
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.0
PRK08017	256	oxidoreductase; Provisional	95.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.99
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	94.99
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.99
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.96
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.96
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.96
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.96
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	94.94
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.93
PRK06841	255	short chain dehydrogenase; Provisional	94.92
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.88
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.87
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.87
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.85
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.85
PLN02490	340	MPBQ/MSBQ methyltransferase	94.85
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.85
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.84
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.83
PRK07454	241	short chain dehydrogenase; Provisional	94.79
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.79
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.74
PRK05717	255	oxidoreductase; Validated	94.73
PRK12480	330	D-lactate dehydrogenase; Provisional	94.71
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	94.71
PRK07774	250	short chain dehydrogenase; Provisional	94.7
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.7
PRK07340	304	ornithine cyclodeaminase; Validated	94.7
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.69
PRK08643	256	acetoin reductase; Validated	94.68
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.67
PLN00203	519	glutamyl-tRNA reductase	94.65
PLN03075	296	nicotianamine synthase; Provisional	94.63
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.61
PRK05875	276	short chain dehydrogenase; Provisional	94.61
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	94.61
PRK08862	227	short chain dehydrogenase; Provisional	94.58
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	94.51
PRK06914	280	short chain dehydrogenase; Provisional	94.49
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.49
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	94.46
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.45
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.44
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.42
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	94.41
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.41
PLN02780	320	ketoreductase/ oxidoreductase	94.37
PRK08263	275	short chain dehydrogenase; Provisional	94.37
TIGR00438	188	rrmJ cell division protein FtsJ.	94.31
PRK06141	314	ornithine cyclodeaminase; Validated	94.29
PRK08339	263	short chain dehydrogenase; Provisional	94.29
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	94.29
PLN02253	280	xanthoxin dehydrogenase	94.29
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.27
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.27
PRK08589	272	short chain dehydrogenase; Validated	94.27
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	94.27
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.26
PRK06138	252	short chain dehydrogenase; Provisional	94.26
PRK06932	314	glycerate dehydrogenase; Provisional	94.24
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.24
PRK08267	260	short chain dehydrogenase; Provisional	94.23
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.23
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.23
PRK08264	238	short chain dehydrogenase; Validated	94.23
PRK06179	270	short chain dehydrogenase; Provisional	94.22
PRK11207	197	tellurite resistance protein TehB; Provisional	94.22
PRK06484	520	short chain dehydrogenase; Validated	94.21
PRK06482	276	short chain dehydrogenase; Provisional	94.21
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.2
PRK06483	236	dihydromonapterin reductase; Provisional	94.19
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.19
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.18
PRK07402	196	precorrin-6B methylase; Provisional	94.17
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.13
PRK06436	303	glycerate dehydrogenase; Provisional	94.12
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.1
PRK06720	169	hypothetical protein; Provisional	94.1
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.09
PRK10538	248	malonic semialdehyde reductase; Provisional	94.09
PRK06484	520	short chain dehydrogenase; Validated	94.08
PRK05884	223	short chain dehydrogenase; Provisional	94.08
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.06
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.03
PRK06953	222	short chain dehydrogenase; Provisional	94.02
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.01
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	93.99
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.98
PRK06114	254	short chain dehydrogenase; Provisional	93.98
PRK06487	317	glycerate dehydrogenase; Provisional	93.93
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.92
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	93.92
PRK06198	260	short chain dehydrogenase; Provisional	93.91
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.91
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	93.9
KOG1252	362	consensus Cystathionine beta-synthase and related	93.89
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.84
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.76
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.75
PRK04266	226	fibrillarin; Provisional	93.74
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.74
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	93.73
PRK08226	263	short chain dehydrogenase; Provisional	93.72
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	93.72
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	93.71
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.71
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.7
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.65
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	93.64
PLN02336	475	phosphoethanolamine N-methyltransferase	93.62
PRK07856	252	short chain dehydrogenase; Provisional	93.62
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.62
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.59
PRK05854	313	short chain dehydrogenase; Provisional	93.55
PRK07062	265	short chain dehydrogenase; Provisional	93.55
PRK07417	279	arogenate dehydrogenase; Reviewed	93.54
PRK07063	260	short chain dehydrogenase; Provisional	93.53
PRK12828	239	short chain dehydrogenase; Provisional	93.52
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.51
PRK08655	437	prephenate dehydrogenase; Provisional	93.49
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	93.48
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.48
KOG1540	296	consensus Ubiquinone biosynthesis methyltransferas	93.48
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	93.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	93.44
PRK08303	305	short chain dehydrogenase; Provisional	93.44
PRK07576	264	short chain dehydrogenase; Provisional	93.44
PRK14982	340	acyl-ACP reductase; Provisional	93.42
PRK06398	258	aldose dehydrogenase; Validated	93.37
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.37
PRK07775	274	short chain dehydrogenase; Provisional	93.34
PRK07523	255	gluconate 5-dehydrogenase; Provisional	93.34
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.31
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.3
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.3
PRK08703	239	short chain dehydrogenase; Provisional	93.28
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.26
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.24
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	93.19
PLN02427	386	UDP-apiose/xylose synthase	93.18
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.16
PRK07890	258	short chain dehydrogenase; Provisional	93.15
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	93.11
KOG0725	270	consensus Reductases with broad range of substrate	93.11
PRK06172	253	short chain dehydrogenase; Provisional	93.11
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.11
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.1
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.1
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.09
PRK07109	334	short chain dehydrogenase; Provisional	93.08
PRK07035	252	short chain dehydrogenase; Provisional	93.08
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.06
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	93.04
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	93.04
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	93.03
PRK08219	227	short chain dehydrogenase; Provisional	93.02
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.01
PRK06194	287	hypothetical protein; Provisional	92.96
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	92.95
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	92.94
PRK06197	306	short chain dehydrogenase; Provisional	92.93
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	92.93
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	92.93
PRK05876	275	short chain dehydrogenase; Provisional	92.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.88
PRK07791	286	short chain dehydrogenase; Provisional	92.88
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	92.85
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	92.85
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	92.83
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.82
PRK06101	240	short chain dehydrogenase; Provisional	92.8
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	92.8
PRK12743	256	oxidoreductase; Provisional	92.78
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	92.77
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	92.75
PLN02896	353	cinnamyl-alcohol dehydrogenase	92.75
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	92.75
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.74
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	92.72
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.72
PRK07024	257	short chain dehydrogenase; Provisional	92.7
PRK06125	259	short chain dehydrogenase; Provisional	92.7
PRK07904	253	short chain dehydrogenase; Provisional	92.67
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	92.66
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	92.65
PLN02686	367	cinnamoyl-CoA reductase	92.64
PRK08628	258	short chain dehydrogenase; Provisional	92.64
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.62
PRK03562	621	glutathione-regulated potassium-efflux system prot	92.62
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	92.6
PRK06128	300	oxidoreductase; Provisional	92.53
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.49
PRK08085	254	gluconate 5-dehydrogenase; Provisional	92.49
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.41
PRK09186	256	flagellin modification protein A; Provisional	92.39
PRK07067	257	sorbitol dehydrogenase; Provisional	92.37
PRK06823	315	ornithine cyclodeaminase; Validated	92.36
PRK12939	250	short chain dehydrogenase; Provisional	92.36
PRK03659	601	glutathione-regulated potassium-efflux system prot	92.36
PRK06124	256	gluconate 5-dehydrogenase; Provisional	92.34
PRK09242	257	tropinone reductase; Provisional	92.3
PRK00536	262	speE spermidine synthase; Provisional	92.3
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	92.26
PRK08278	273	short chain dehydrogenase; Provisional	92.25
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	92.24
PRK06181	263	short chain dehydrogenase; Provisional	92.2
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	92.19
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	92.17
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.16
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	92.15
TIGR00452	314	methyltransferase, putative. Known examples to dat	92.15
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	92.11
PRK05855	582	short chain dehydrogenase; Validated	92.09
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	92.09
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	92.07
PRK13255	218	thiopurine S-methyltransferase; Reviewed	92.05
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	92.05
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	92.05
PRK08251	248	short chain dehydrogenase; Provisional	92.02
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.01
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	92.0
COG4122	219	Predicted O-methyltransferase [General function pr	91.96
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.95
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	91.94
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.93
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.93
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	91.92
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.9
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	91.89
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	91.84
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.8
PRK07102	243	short chain dehydrogenase; Provisional	91.77
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.75
PRK10669	558	putative cation:proton antiport protein; Provision	91.75
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	91.71
PLN00198	338	anthocyanidin reductase; Provisional	91.71
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.7
PRK12937	245	short chain dehydrogenase; Provisional	91.65
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	91.62
KOG1208	314	consensus Dehydrogenases with different specificit	91.61
PRK07589	346	ornithine cyclodeaminase; Validated	91.57
PLN00016	378	RNA-binding protein; Provisional	91.51
PRK14901	434	16S rRNA methyltransferase B; Provisional	91.49
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	91.49
PLN02214	342	cinnamoyl-CoA reductase	91.47
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	91.47
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	91.45
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	91.44
PRK14904	445	16S rRNA methyltransferase B; Provisional	91.4
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	91.4
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	91.38
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	91.37
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	91.31
PRK07074	257	short chain dehydrogenase; Provisional	91.2
PRK07832	272	short chain dehydrogenase; Provisional	91.14
PRK12938	246	acetyacetyl-CoA reductase; Provisional	91.14

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.1e-54  Score=369.78  Aligned_cols=299  Identities=34%  Similarity=0.504  Sum_probs=259.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++|. |++.|+|+++||+|++.|+|+||+|+|.++|.++.  ..+|.++|||.+|+|+++|++|+
T Consensus         4 mkA~~~~~~~~p---l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~--~~~P~ipGHEivG~V~~vG~~V~   77 (339)
T COG1064           4 MKAAVLKKFGQP---LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV--PKLPLIPGHEIVGTVVEVGEGVT   77 (339)
T ss_pred             eEEEEEccCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC--CCCCccCCcceEEEEEEecCCCc
Confidence            899999999997   7999 99999999999999999999999999999999854  45999999999999999999999


Q ss_pred             CCCCCCeeEe-ec-C-----------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYG-DI-N-----------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~-~~-~-----------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +|++||||.. .. .                 .....+...+|+|+||+++|..+++++|++++++.||.+.|+..|+|+
T Consensus        78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~  157 (339)
T COG1064          78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR  157 (339)
T ss_pred             cCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence            9999999976 11 0                 111123336899999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-cCCCccEEEe
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD  220 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~dvvi~  220 (310)
                      +++..+++||++|+|+| .|++|.+|+|+|+++ |++|++++++++|++.++++|++++++..+++..+ ..+.+|++||
T Consensus       158 alk~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~-ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         158 ALKKANVKPGKWVAVVG-AGGLGHMAVQYAKAM-GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             ehhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEE
Confidence            99999999999999999 789999999999997 89999999999999999999999999876444333 2234999999


Q ss_pred             CCC--ChHHHHhhcccCCEEEEEeCCC-CC-Cce---EE---------EEecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628          221 AVG--QCDKALKAVKEGGRVVSIIGSV-TP-PAS---SF---------VLTSDGSILEKLNPYFESGKVKAIIDPKGPFP  284 (310)
Q Consensus       221 ~~g--~~~~~~~~l~~~G~~v~~g~~~-~~-~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (310)
                      +++  .++..++.|+++|+++.+|.+. .+ ..+   .+         .......+++++++|..+|++++.+.  +.++
T Consensus       236 tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~--e~~~  313 (339)
T COG1064         236 TVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEIL--ETIP  313 (339)
T ss_pred             CCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEE--eeEC
Confidence            998  3589999999999999999873 22 111   11         11224688999999999999999752  5899


Q ss_pred             hhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          285 FSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       285 ~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++|+++|++.|++++..||.||++.
T Consensus       314 l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         314 LDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999999874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=2.4e-46  Score=328.42  Aligned_cols=296  Identities=44%  Similarity=0.618  Sum_probs=252.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+++.+ +.++++ |.|.|+|++|||+||+.++++|+.|.....|.. ....++|+++|.|++|+|+++|++++
T Consensus         1 mka~~~~~~g~~-~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~-~~~~~~P~i~G~d~aG~V~avG~~V~   77 (326)
T COG0604           1 MKAVVVEEFGGP-EVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAGVVVAVGSGVT   77 (326)
T ss_pred             CeEEEEeccCCC-ceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC-CCCCCCCCcccceeEEEEEEeCCCCC
Confidence            999999999999 669999 999999999999999999999999999999872 23456899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|+.... .     ...|+|+||.++|.+.++++|+++++++||+++++++|||+++. ..++++|++|||+|+
T Consensus        78 ~~~~GdrV~~~~~-~-----~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ga  151 (326)
T COG0604          78 GFKVGDRVAALGG-V-----GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGA  151 (326)
T ss_pred             CcCCCCEEEEccC-C-----CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            9999999999740 0     04799999999999999999999999999999999999999995 689999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|.+++|+||.+ |+.+++++.++++.++++++|+++++++.++++.+.      .+++|+|||+.|.  +...+++
T Consensus       152 aGgVG~~aiQlAk~~-G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~  230 (326)
T COG0604         152 AGGVGSAAIQLAKAL-GATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA  230 (326)
T ss_pred             CchHHHHHHHHHHHc-CCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence            999999999999996 878888888888888999999999999887766443      2379999999984  5789999


Q ss_pred             cccCCEEEEEeCCCC-CC-----------ceEE---EEecC-----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          232 VKEGGRVVSIIGSVT-PP-----------ASSF---VLTSD-----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       232 l~~~G~~v~~g~~~~-~~-----------~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      |+++|+++.+|.... ..           .+..   .....     .+.+.++.+++.+|.+++.+  ..+|+++|..++
T Consensus       231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i--~~~~~l~e~~~a  308 (326)
T COG0604         231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVI--DRVYPLAEAPAA  308 (326)
T ss_pred             hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCccee--ccEechhhhHHH
Confidence            999999999987541 11           0110   11112     45678899999999999975  389999997666


Q ss_pred             HHHHHc-CCCCccEEEEe
Q 021628          292 FSHLES-SRATGKVVIHP  308 (310)
Q Consensus       292 ~~~~~~-~~~~~k~vi~~  308 (310)
                      ...... ++..||+++++
T Consensus       309 ~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         309 AAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHcccCCcceEEEeC
Confidence            665444 48889999874

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.9e-47  Score=320.05  Aligned_cols=298  Identities=27%  Similarity=0.359  Sum_probs=255.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      +||++..++++|   |+|+ |++.++|++|||+||+.++|+||+|+...+|..|   ..+|.++|||+.|+|+++|++|.
T Consensus         3 ~~aAV~~~~~~P---l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p---~~~P~vLGHEgAGiVe~VG~gVt   75 (366)
T COG1062           3 TRAAVAREAGKP---LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP---EGFPAVLGHEGAGIVEAVGEGVT   75 (366)
T ss_pred             ceEeeeecCCCC---eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCceecccccccEEEEecCCcc
Confidence            689999999999   9999 9999999999999999999999999999999874   44899999999999999999999


Q ss_pred             CCCCCCeeEeecCc--------------------------------cccC-------CCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINE--------------------------------KALD-------HPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~--------------------------------~~~~-------~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||+|+..+..                                .+++       ..-.-++|++|.+++..++++++
T Consensus        76 ~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~  155 (366)
T COG1062          76 SVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKID  155 (366)
T ss_pred             ccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECC
Confidence            99999999876430                                0000       00112499999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      ++.+++.++++.|+.+|.+.++ +.+++++|++|.|+| .|++|++++|-|+.. |+ ++|+++.+++|++++++||+++
T Consensus       156 ~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~a-gA~~IiAvD~~~~Kl~~A~~fGAT~  233 (366)
T COG1062         156 PDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAA-GAGRIIAVDINPEKLELAKKFGATH  233 (366)
T ss_pred             CCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHc-CCceEEEEeCCHHHHHHHHhcCCce
Confidence            9999999999999999999987 799999999999999 999999999999996 76 6778888999999999999999


Q ss_pred             EeeCCCCc-cc----ccC-CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc-----eEEEE-----ec----
Q 021628          200 AIDYTKEN-IE----DLP-EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA-----SSFVL-----TS----  256 (310)
Q Consensus       200 ~~~~~~~~-~~----~~~-~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~-----~~----  256 (310)
                      ++|+.+.. ..    +.. .|+|.+|||+|+   ++.+++++.++|+.+..|.......     +++..     .+    
T Consensus       234 ~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~  313 (366)
T COG1062         234 FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGG  313 (366)
T ss_pred             eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecC
Confidence            99987653 22    223 399999999996   5899999999999999987652221     11211     00    


Q ss_pred             --CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          257 --DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       257 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                        -..++..+++++.+|++....++++.++|+|+||||+.|.+++.. |.||.|
T Consensus       314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~  366 (366)
T COG1062         314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF  366 (366)
T ss_pred             CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence              146799999999999999998999999999999999999999987 777654

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-46  Score=310.62  Aligned_cols=301  Identities=27%  Similarity=0.367  Sum_probs=248.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      |+|+++.++++.    +|+ +.|.|++ .|+||+|++.++|||.||+|++..... ...-+.|.++|||.+|+|+++|++
T Consensus         5 ~~A~vl~g~~di----~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~   79 (354)
T KOG0024|consen    5 NLALVLRGKGDI----RIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE   79 (354)
T ss_pred             cceeEEEccCce----eEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence            789999999997    999 8999988 999999999999999999999976432 122357999999999999999999


Q ss_pred             CCCCCCCCeeEeecC------------------ccc-cCCCCCCCcceeEEEEecCccccCCCCCChhhhccc-cchHHH
Q 021628           79 VKKFKVGDEVYGDIN------------------EKA-LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATET  138 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~------------------~~~-~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~~~~t  138 (310)
                      |.++++||||..-+.                  +.. ...+..+|++++|++.+.+.|+++|++++++++|++ |+  +.
T Consensus        80 Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL--sV  157 (354)
T KOG0024|consen   80 VKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL--SV  157 (354)
T ss_pred             ccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch--hh
Confidence            999999999976542                  111 123345799999999999999999999999999999 64  45


Q ss_pred             HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc-ccc---c--
Q 021628          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED---L--  211 (310)
Q Consensus       139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---~--  211 (310)
                      ++||.+.+++++|++|||+| +|++|+++...||++ |+ +|++++-.+.|++.++++|++.+.+....+ ..+   .  
T Consensus       158 ~~HAcr~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~-GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~  235 (354)
T KOG0024|consen  158 GVHACRRAGVKKGSKVLVLG-AGPIGLLTGLVAKAM-GASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE  235 (354)
T ss_pred             hhhhhhhcCcccCCeEEEEC-CcHHHHHHHHHHHHc-CCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence            99999999999999999999 999999999999997 75 777888899999999999999887655433 211   1  


Q ss_pred             -C---CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEE--EEecCHHHHHHHHHHHHcCC
Q 021628          212 -P---EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSF--VLTSDGSILEKLNPYFESGK  272 (310)
Q Consensus       212 -~---~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~  272 (310)
                       .   ..+|++|||+|.   .+.++..++.+|.+++++.-....          ..++  .+.....++..+++++++|+
T Consensus       236 ~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGk  315 (354)
T KOG0024|consen  236 KALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGK  315 (354)
T ss_pred             hhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCC
Confidence             1   249999999993   589999999999988887432211          1111  12223457999999999999


Q ss_pred             eeEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEeCC
Q 021628          273 VKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHPIP  310 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~~~  310 (310)
                      ++...++|+.|+++++.+||+.+..++. .-|+++...+
T Consensus       316 i~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  316 IDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             cCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            9998899999999999999999988773 3488887654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.8e-45  Score=303.92  Aligned_cols=299  Identities=27%  Similarity=0.384  Sum_probs=246.0

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ++|.+.+++.. ..+++. +++.|+++++||+|++.|+|+||+|+|.+.|.++.  .++|.++|||++|+|+++|+++++
T Consensus        11 ~g~~~~~~~G~-l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~   86 (360)
T KOG0023|consen   11 FGWAARDPSGV-LSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL--SKYPLVPGHEIAGVVVKVGSNVTG   86 (360)
T ss_pred             EEEEEECCCCC-CCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc--ccCCccCCceeeEEEEEECCCccc
Confidence            57888888876 556778 89999999999999999999999999999998853  789999999999999999999999


Q ss_pred             CCCCCeeEee-------------------cC--ccccCCCCCC-----CcceeEEEEecCccccCCCCCChhhhccccch
Q 021628           82 FKVGDEVYGD-------------------IN--EKALDHPKRN-----GSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (310)
Q Consensus        82 ~~~Gd~V~~~-------------------~~--~~~~~~~~~~-----g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (310)
                      |++||||-.=                   ++  ..+++++..+     |+|++|++++...+++||++++.+.||.+.|+
T Consensus        87 ~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCa  166 (360)
T KOG0023|consen   87 FKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCA  166 (360)
T ss_pred             ccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhc
Confidence            9999998321                   11  2333444444     55999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHHHHHHcCCCEEeeCC-CCcccc-c-
Q 021628          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYT-KENIED-L-  211 (310)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~-~-  211 (310)
                      ..|+|.+|+..++.||+++.|.| .|++|.+|+|+||++ |.+|++++++. +|.+.++.||++..++.. +++.-+ . 
T Consensus       167 GITvYspLk~~g~~pG~~vgI~G-lGGLGh~aVq~AKAM-G~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~  244 (360)
T KOG0023|consen  167 GITVYSPLKRSGLGPGKWVGIVG-LGGLGHMAVQYAKAM-GMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIM  244 (360)
T ss_pred             ceEEeehhHHcCCCCCcEEEEec-CcccchHHHHHHHHh-CcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence            99999999999999999999999 555999999999998 99999999977 566666889999887765 444322 1 


Q ss_pred             ---CCCccEEEeCCC-ChHHHHhhcccCCEEEEEeCCCCCCceE---EEE------e---cCHHHHHHHHHHHHcCCeeE
Q 021628          212 ---PEKFDVVFDAVG-QCDKALKAVKEGGRVVSIIGSVTPPASS---FVL------T---SDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       212 ---~~~~dvvi~~~g-~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~------~---~~~~~~~~~~~~~~~~~~~~  275 (310)
                         ..++|-|.+.+- .++.+++.|+++|++|++|.+..+..++   +.+      .   ....+.+++++|..++.++.
T Consensus       245 ~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~  324 (360)
T KOG0023|consen  245 KTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKS  324 (360)
T ss_pred             HhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcC
Confidence               223444444432 3588999999999999999876332221   111      1   13567899999999999998


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++   ...+++++++||+.|.++...+|.||++.
T Consensus       325 ~I---E~v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  325 PI---ELVKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             ce---EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            75   57899999999999999999999998764

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-43  Score=285.15  Aligned_cols=293  Identities=35%  Similarity=0.476  Sum_probs=259.0

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |.++++++|.. +.++|+ +.|.|+|.++|+.||..|+|++..|.-...|.|.  +...|+++|-|++|+|+++|+++++
T Consensus        10 k~i~v~e~Ggy-dvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~--~~plPytpGmEaaGvVvAvG~gvtd   85 (336)
T KOG1197|consen   10 KCIVVTEFGGY-DVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD--PAPLPYTPGMEAAGVVVAVGEGVTD   85 (336)
T ss_pred             eEEEEeccCCc-ceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC--CCCCCcCCCcccceEEEEecCCccc
Confidence            67899999999 999999 9999999999999999999999999999999883  5778999999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~  160 (310)
                      +++||||....+         .|.|+++..+|...+.++|+.+++..||++.+.++|||.-+ +..+++||++||++.++
T Consensus        86 rkvGDrVayl~~---------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA  156 (336)
T KOG1197|consen   86 RKVGDRVAYLNP---------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA  156 (336)
T ss_pred             cccccEEEEecc---------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence            999999988754         89999999999999999999999999999999999999888 57899999999999999


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCC--ChHHHHhhc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVG--QCDKALKAV  232 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g--~~~~~~~~l  232 (310)
                      |++|++++|+++.. |+.+|.+..+.++.+.+++.|+.+.++++.+|+.+.      .+|+|+++|..|  .+...+.+|
T Consensus       157 GGVGlll~Ql~ra~-~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L  235 (336)
T KOG1197|consen  157 GGVGLLLCQLLRAV-GAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL  235 (336)
T ss_pred             ccHHHHHHHHHHhc-CcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence            99999999999996 999999999999999999999999999998886432      569999999998  468899999


Q ss_pred             ccCCEEEEEeCCCCC-CceEE----------EEe-----cC--HH---HHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          233 KEGGRVVSIIGSVTP-PASSF----------VLT-----SD--GS---ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       233 ~~~G~~v~~g~~~~~-~~~~~----------~~~-----~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      ++.|.++++|..... ..+++          ...     ..  .+   -..++..++.++.+++.+  .|+||++++.+|
T Consensus       236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I--~~~ypls~vadA  313 (336)
T KOG1197|consen  236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHI--DHVYPLSKVADA  313 (336)
T ss_pred             ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceee--eeecchHHHHHH
Confidence            999999999976421 11111          100     01  12   235677888899999875  589999999999


Q ss_pred             HHHHHcCCCCccEEEEeCC
Q 021628          292 FSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~~~  310 (310)
                      ..+++++++.||+++.+.|
T Consensus       314 ~~diesrktvGkvlLlp~~  332 (336)
T KOG1197|consen  314 HADIESRKTVGKVLLLPGP  332 (336)
T ss_pred             HHHHHhhhccceEEEeCCc
Confidence            9999999999999998765

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=9.2e-43  Score=310.49  Aligned_cols=299  Identities=29%  Similarity=0.383  Sum_probs=246.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++.    ++++ +.|.|+++++||+||+.++++|++|++.+.+.+.. +..+|.++|||++|+|+++|+++.
T Consensus         1 mka~~~~~~~~----l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~   74 (339)
T cd08239           1 MRGAVFPGDRT----VELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA-PAYQGVIPGHEPAGVVVAVGPGVT   74 (339)
T ss_pred             CeEEEEecCCc----eEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc-cCCCCceeccCceEEEEEECCCCc
Confidence            99999997665    4999 89999999999999999999999999988776421 233578999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||+|+..+.....                   .+....|+|++|+++|...++++|+++++++++.+++++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            99999999876421000                   12234699999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc---cc--CCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE---DL--PEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~--~~~~  215 (310)
                      ++....+++|++|+|+| +|++|++++++|+.+ |++ |++++++++|++.++++|+++++++++++..   ..  ..++
T Consensus       155 ~l~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~  232 (339)
T cd08239         155 ALRRVGVSGRDTVLVVG-AGPVGLGALMLARAL-GAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGA  232 (339)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCC
Confidence            99878889999999998 699999999999996 998 8898899999999999999999887654311   11  2379


Q ss_pred             cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (310)
                      |++|||+|.   ...++++++++|+++.+|......          ...+.  .....++++++++++.++.+++...++
T Consensus       233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~  312 (339)
T cd08239         233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT  312 (339)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence            999999985   267899999999999998643211          01111  111346799999999999998755667


Q ss_pred             cccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          281 GPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++|+++++++|++.+.++. .||++|++
T Consensus       313 ~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         313 HRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            8999999999999988875 68999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=6.8e-43  Score=314.72  Aligned_cols=300  Identities=26%  Similarity=0.319  Sum_probs=246.6

Q ss_pred             CEEEEEcccCCC-----ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEe
Q 021628            1 MKAWVYKEYGNS-----QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV   75 (310)
Q Consensus         1 mka~~~~~~g~~-----~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~   75 (310)
                      |||+++.++|.+     .+.++++ +.|.|+++++||+||+.+++||++|++.+.|.++   ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP---RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC---CCCCccCCccceeEEEEe
Confidence            999999998853     2668999 9999999999999999999999999999988653   356899999999999999


Q ss_pred             CCCCCCCCCCCeeEeecCcc-c----------cC----------C------------------CCCCCcceeEEEEecCc
Q 021628           76 GSQVKKFKVGDEVYGDINEK-A----------LD----------H------------------PKRNGSLAEYTAVEENL  116 (310)
Q Consensus        76 g~~~~~~~~Gd~V~~~~~~~-~----------~~----------~------------------~~~~g~~~~~~~~~~~~  116 (310)
                      |++++++++||+|++.+... +          ..          +                  ....|+|++|+++|...
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            99999999999998742100 0          00          0                  00137999999999999


Q ss_pred             cccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH
Q 021628          117 LALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS  194 (310)
Q Consensus       117 ~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~  194 (310)
                      ++++|+++++++++.+++++.|||+++ +.+.+++|++|+|+| +|++|++++++|+.+ |+ +|++++.+++|++.+++
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~-G~~~Vi~~~~~~~r~~~a~~  234 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAA-GASQVVAVDLNEDKLALARE  234 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHH
Confidence            999999999999999999999999997 578899999999999 799999999999996 98 58888999999999999


Q ss_pred             cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce------------EEEE
Q 021628          195 LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS------------SFVL  254 (310)
Q Consensus       195 ~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~------------~~~~  254 (310)
                      +|+++++++.++++.+     ...++|++|||+|.   ...++++++++|+++.+|........            .+..
T Consensus       235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  314 (371)
T cd08281         235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKG  314 (371)
T ss_pred             cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence            9999998876554321     12379999999984   47889999999999999865321111            1111


Q ss_pred             --ec---CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          255 --TS---DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       255 --~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                        ..   ...++.++++++.++++++...++++|+++|+++|++.+.+++..+|+++
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence              01   13578899999999999876567899999999999999999988877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.7e-43  Score=290.77  Aligned_cols=299  Identities=25%  Similarity=0.319  Sum_probs=254.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++.+++++|   |.|+ |+.+++|+..||+||+.++++||+|...+.|..  ....+|.++|||++|+|+.+|.+|.
T Consensus         8 CKAAV~w~a~~P---L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~--~~~~fP~IlGHEaaGIVESvGegV~   81 (375)
T KOG0022|consen    8 CKAAVAWEAGKP---LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD--PEGLFPVILGHEAAGIVESVGEGVT   81 (375)
T ss_pred             EeEeeeccCCCC---eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC--ccccCceEecccceeEEEEecCCcc
Confidence            699999999999   9999 999999999999999999999999999999976  3467899999999999999999999


Q ss_pred             CCCCCCeeEeecCc---------------------------cccC-------------CCCCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINE---------------------------KALD-------------HPKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~---------------------------~~~~-------------~~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      .+++||+|+..+.+                           ..++             ++-...+|+||.+++...+.+|
T Consensus        82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI  161 (375)
T KOG0022|consen   82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI  161 (375)
T ss_pred             ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence            99999999865420                           0000             1111249999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      ++..+++.++++.|++.|+|.|. +.++++||+++.|+| -|++|+++++-|+.. |+ ++|.++.|++|.+.+++||++
T Consensus       162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~-GAsrIIgvDiN~~Kf~~ak~fGaT  239 (375)
T KOG0022|consen  162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAA-GASRIIGVDINPDKFEKAKEFGAT  239 (375)
T ss_pred             CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhc-CcccEEEEecCHHHHHHHHhcCcc
Confidence            99999999999999999999998 799999999999999 999999999999996 65 788888899999999999999


Q ss_pred             EEeeCCCCc--cc----cc-CCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCceEE---------------
Q 021628          199 LAIDYTKEN--IE----DL-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASSF---------------  252 (310)
Q Consensus       199 ~~~~~~~~~--~~----~~-~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~~---------------  252 (310)
                      ..+|+.+..  ..    ++ ..|+|.-|||.|+   +++++.+...+ |.-+.+|.......++.               
T Consensus       240 e~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~  319 (375)
T KOG0022|consen  240 EFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSA  319 (375)
T ss_pred             eecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEe
Confidence            999987321  11    11 3589999999996   47888888888 99999987653332221               


Q ss_pred             -EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          253 -VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                       ......+++..+++.+.++.+.....+||++||+++++||+.|.+++.. |.++.+
T Consensus       320 FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  320 FGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             cccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence             1112357899999999999999988999999999999999999999987 888764

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-42  Score=307.69  Aligned_cols=297  Identities=19%  Similarity=0.277  Sum_probs=237.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHh-CCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.++++.    +++ +.+.| ++++||+||+.+++||++|++.+. |.++.....+|.++|||++|+|+++  ++
T Consensus         5 ~~~~~~~~~~~~----~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v   76 (343)
T PRK09880          5 TQSCVVAGKKDV----AVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS   76 (343)
T ss_pred             ceEEEEecCCce----EEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence            689999988876    888 88887 689999999999999999999875 4332223457899999999999999  77


Q ss_pred             CCCCCCCeeEeecCccc------------------cCC-----CCCCCcceeEEEEecCccccCCCCCChhhhccccchH
Q 021628           80 KKFKVGDEVYGDINEKA------------------LDH-----PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT  136 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~------------------~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  136 (310)
                      .++++||+|+..+....                  ..+     ...+|+|+||++++...++++|+++++++++ +...+
T Consensus        77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~  155 (343)
T PRK09880         77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPL  155 (343)
T ss_pred             ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHH
Confidence            88999999986431100                  000     1236999999999999999999999987665 34466


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccccc---C
Q 021628          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---P  212 (310)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~  212 (310)
                      .++|+++......+|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|+++++++.++++.+.   .
T Consensus       156 ~~a~~al~~~~~~~g~~VlV~G-~G~vG~~aiqlak~~-G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~  233 (343)
T PRK09880        156 AVAIHAAHQAGDLQGKRVFVSG-VGPIGCLIVAAVKTL-GAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK  233 (343)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC
Confidence            7899999777777899999999 699999999999996 88 5888899999999999999999988766543322   2


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEEE-ecCHHHHHHHHHHHHcCCeeEEec
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL-TSDGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      .++|++|||+|.   ...++++++++|+++.+|.......+          .+.. .....+++++++++.++++++...
T Consensus       234 g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~  313 (343)
T PRK09880        234 GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPL  313 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhh
Confidence            359999999984   47899999999999999864321111          1111 112357899999999999987556


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++|+++|+++|++.+.++...+|++|.+
T Consensus       314 i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        314 LSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             eEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            678999999999999998888789999864

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=4.2e-42  Score=308.24  Aligned_cols=297  Identities=22%  Similarity=0.277  Sum_probs=244.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||+++++++|++   ++++ +.|.|+++++||+||+.++++|++|++.+.|.++   ..+|.++|||++|+|+++|+++.
T Consensus         2 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~   74 (358)
T TIGR03451         2 VRGVIARSKGAP---VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN---DEFPFLLGHEAAGVVEAVGEGVT   74 (358)
T ss_pred             cEEEEEccCCCC---CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc---ccCCcccccceEEEEEEeCCCCc
Confidence            999999999976   6888 9999999999999999999999999999988652   34688999999999999999999


Q ss_pred             CCCCCCeeEeecCc-----------cccC---------------CC-----CCCCcceeEEEEecCccccCCCCCChhhh
Q 021628           81 KFKVGDEVYGDINE-----------KALD---------------HP-----KRNGSLAEYTAVEENLLALKPKNLSFVEA  129 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-----------~~~~---------------~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~a  129 (310)
                      ++++||+|++.+..           ....               +.     ...|+|+||+.+|...++++|++++++++
T Consensus        75 ~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~a  154 (358)
T TIGR03451        75 DVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAA  154 (358)
T ss_pred             ccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHh
Confidence            99999999863210           0000               00     12589999999999999999999999999


Q ss_pred             ccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628          130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (310)
Q Consensus       130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (310)
                      +.+++++.++|+++ +.+.+++|++|+|+| +|++|++++|+|+.+ |++ |++++++++|++.++++|+++++++++++
T Consensus       155 a~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~-G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~  232 (358)
T TIGR03451       155 GLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALA-GASKIIAVDIDDRKLEWAREFGATHTVNSSGTD  232 (358)
T ss_pred             hhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence            99999999999887 578899999999998 799999999999996 985 88888999999999999999988876544


Q ss_pred             ccc----c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC------------ceEEEEe-----cCHHHH
Q 021628          208 IED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFVLT-----SDGSIL  261 (310)
Q Consensus       208 ~~~----~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~~~-----~~~~~~  261 (310)
                      ..+    .  ..++|++|||+|+   ...++++++++|+++.+|......            ...+...     .....+
T Consensus       233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  312 (358)
T TIGR03451       233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF  312 (358)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence            321    1  2479999999984   478899999999999998653211            1111111     024578


Q ss_pred             HHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++++.++++++...++++|+++|+++|++.+.+++.. |+++.
T Consensus       313 ~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       313 PMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            8899999999998755567899999999999999888776 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=8.3e-42  Score=307.15  Aligned_cols=299  Identities=26%  Similarity=0.320  Sum_probs=243.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++...++.   ++++ +.|.|+++++||+||+.++++|++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         2 ~~a~~~~~~~~~---l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~   75 (368)
T TIGR02818         2 SRAAVAWAAGQP---LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADP--EGVFPVILGHEGAGIVEAVGEGVT   75 (368)
T ss_pred             ceEEEEecCCCC---eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCC--CCCCCeeeccccEEEEEEECCCCc
Confidence            899999988765   7888 8999999999999999999999999999988763  235789999999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------------cC----------C-----CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEKA------------------------LD----------H-----PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------------~~----------~-----~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||+..+....                        ..          +     ....|+|+||+++|.+.++++|
T Consensus        76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP  155 (368)
T TIGR02818        76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN  155 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence            9999999987532100                        00          0     0013799999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++.+++|++.++++|++.
T Consensus       156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~-G~~~Vi~~~~~~~~~~~a~~~Ga~~  233 (368)
T TIGR02818       156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMA-KASRIIAIDINPAKFELAKKLGATD  233 (368)
T ss_pred             CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCe
Confidence            9999999999999999999998 578999999999998 799999999999996 88 7889999999999999999999


Q ss_pred             EeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCC--C---ceE-----EEEe---
Q 021628          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTP--P---ASS-----FVLT---  255 (310)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~--~---~~~-----~~~~---  255 (310)
                      +++..+  +++..     ...++|++|||+|.   ...++++++++ |+++.+|.....  .   .+.     ....   
T Consensus       234 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  313 (368)
T TIGR02818       234 CVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAF  313 (368)
T ss_pred             EEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeec
Confidence            887653  22111     12379999999984   47889999886 999999864211  0   010     0011   


Q ss_pred             ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                         ....++.++++++.++++++...++++|+++|+++|++.+.+++. .|++|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             cCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence               123568899999999999865567899999999999999987765 5988875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.6e-41  Score=306.60  Aligned_cols=300  Identities=24%  Similarity=0.317  Sum_probs=244.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++++.   ++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus        11 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740         11 CKAAVAWGPGEP---LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA-QRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             eEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc-cCCCCccccccceEEEEEeCCCCC
Confidence            899999998865   5788 89999999999999999999999999999886531 235789999999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------c---------CC---------------CCCCCcceeEEEEecCccc
Q 021628           81 KFKVGDEVYGDINEKA------------------L---------DH---------------PKRNGSLAEYTAVEENLLA  118 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~---------~~---------------~~~~g~~~~~~~~~~~~~~  118 (310)
                      ++++||+|++.+....                  .         .+               ....|+|+||+++|.+.++
T Consensus        86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~  165 (381)
T PLN02740         86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV  165 (381)
T ss_pred             cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence            9999999987542100                  0         00               0025899999999999999


Q ss_pred             cCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcC
Q 021628          119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLG  196 (310)
Q Consensus       119 ~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g  196 (310)
                      ++|++++.++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|++++++++|++.++++|
T Consensus       166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~-G~~~Vi~~~~~~~r~~~a~~~G  243 (381)
T PLN02740        166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARAR-GASKIIGVDINPEKFEKGKEMG  243 (381)
T ss_pred             ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCCcEEEEcCChHHHHHHHHcC
Confidence            9999999999999999999999987 578999999999999 799999999999996 88 5889999999999999999


Q ss_pred             CCEEeeCCCCc--ccc----c-CCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCC-----------ceEEEE
Q 021628          197 ADLAIDYTKEN--IED----L-PEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPP-----------ASSFVL  254 (310)
Q Consensus       197 ~~~~~~~~~~~--~~~----~-~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~-----------~~~~~~  254 (310)
                      ++.+++.++.+  +.+    . ..++|++||++|.   ...++++++++ |+++.+|....+.           ...+..
T Consensus       244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g  323 (381)
T PLN02740        244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG  323 (381)
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEE
Confidence            99888865432  211    1 2379999999984   47888999996 9999998653211           111111


Q ss_pred             --e-c--CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          255 --T-S--DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       255 --~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                        . .  ....+.++++++.++.+++...++++|+++|+++|++.+.+++.. |++|++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~  381 (381)
T PLN02740        324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL  381 (381)
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence              1 1  135688999999999988755668999999999999999888764 888863

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.4e-41  Score=296.89  Aligned_cols=292  Identities=24%  Similarity=0.294  Sum_probs=239.3

Q ss_pred             EEEEcccCCCc-cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            3 AWVYKEYGNSQ-SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         3 a~~~~~~g~~~-~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |+.+.++|.+. ..++++ +.|.|+++++||+||+.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|+++.+
T Consensus         1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~   77 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV--HRPRVTPGHEVVGEVAGRGADAGG   77 (329)
T ss_pred             CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC--CCCCccCCcceEEEEEEECCCCcc
Confidence            35677776541 358999 99999999999999999999999999999887632  234789999999999999999999


Q ss_pred             CCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           82 FKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        82 ~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      +++||+|+..+.                   .....+...+|+|++|+.+|...++++|+++++++++.+++.+.|||++
T Consensus        78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  157 (329)
T TIGR02822        78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA  157 (329)
T ss_pred             cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence            999999975321                   0011122346999999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      +..+++++|++|+|+| +|++|++++|+|+.+ |++|++++++++|++.++++|++++++..+..    .+++|+++++.
T Consensus       158 ~~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~-G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~~d~~i~~~  231 (329)
T TIGR02822       158 LLRASLPPGGRLGLYG-FGGSAHLTAQVALAQ-GATVHVMTRGAAARRLALALGAASAGGAYDTP----PEPLDAAILFA  231 (329)
T ss_pred             HHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHhCCceeccccccC----cccceEEEECC
Confidence            9778899999999999 599999999999996 99999999999999999999999988753221    24689989887


Q ss_pred             CC---hHHHHhhcccCCEEEEEeCCC-CCCc----------eEEE--EecCHHHHHHHHHHHHcCCeeEEecCCcccchh
Q 021628          223 GQ---CDKALKAVKEGGRVVSIIGSV-TPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFS  286 (310)
Q Consensus       223 g~---~~~~~~~l~~~G~~v~~g~~~-~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (310)
                      +.   ...++++++++|+++.+|... ....          ..+.  ......++.++++++.++++++.   +++|+++
T Consensus       232 ~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i---~~~~~l~  308 (329)
T TIGR02822       232 PAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVT---THTYPLS  308 (329)
T ss_pred             CcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeE---EEEEeHH
Confidence            63   578999999999999998642 1111          1111  11234678889999999999752   5899999


Q ss_pred             hHHHHHHHHHcCCCCccEEE
Q 021628          287 QTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       287 ~~~~a~~~~~~~~~~~k~vi  306 (310)
                      |+++|++.+.+++..||++|
T Consensus       309 ~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       309 EADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHcCCCceEEEe
Confidence            99999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.4e-41  Score=300.77  Aligned_cols=299  Identities=22%  Similarity=0.314  Sum_probs=236.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++.+...+.. +.+++. +.+.|.++++||+||+.++++|++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        11 ~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~p~i~GhE~~G~V~~vG~~v~   86 (360)
T PLN02586         11 QKAFGWAARDPS-GVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG--FTRYPIVPGHEIVGIVTKLGKNVK   86 (360)
T ss_pred             hheeEEEecCCC-CCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC--CCCCCccCCcceeEEEEEECCCCC
Confidence            555555544444 447888 8899999999999999999999999999988653  235689999999999999999999


Q ss_pred             CCCCCCeeEeecC----c--------cc-------c-------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628           81 KFKVGDEVYGDIN----E--------KA-------L-------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (310)
Q Consensus        81 ~~~~Gd~V~~~~~----~--------~~-------~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (310)
                      ++++||+|+..+.    +        ..       .       .+...+|+|+||+++|.+.++++|+++++++++.+++
T Consensus        87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~  166 (360)
T PLN02586         87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLC  166 (360)
T ss_pred             ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhc
Confidence            9999999974211    0        00       0       0122369999999999999999999999999999999


Q ss_pred             hHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEEeeCCCC-ccccc
Q 021628          135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKE-NIEDL  211 (310)
Q Consensus       135 ~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~  211 (310)
                      ++.|+|+++. ....++|++|+|.| +|++|++++|+|+.+ |+++++++.++++ .+.++++|++++++..+. .....
T Consensus       167 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~  244 (360)
T PLN02586        167 AGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAF-GLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA  244 (360)
T ss_pred             chHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence            9999999985 45678999999988 799999999999996 9998888776665 455578999988876442 22222


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceE---------EEEe---cCHHHHHHHHHHHHcCCeeEE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS---------FVLT---SDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ..++|+|||++|.   +..++++++++|+++.+|....+..++         ....   ....+++++++++.+|++++.
T Consensus       245 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~  324 (360)
T PLN02586        245 IGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD  324 (360)
T ss_pred             cCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc
Confidence            3479999999984   467999999999999998543111110         1111   124678999999999999865


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +   ++|+++|+++|++.+.+++..||+++++
T Consensus       325 ~---~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        325 I---ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             E---EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            3   5799999999999999999889999876

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.8e-41  Score=300.70  Aligned_cols=298  Identities=27%  Similarity=0.340  Sum_probs=242.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+.++.   ++++ +.|.|+++++||+||+.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         3 ~~a~~~~~~~~~---~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~E~~G~V~~vG~~v~   76 (368)
T cd08300           3 CKAAVAWEAGKP---LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE--GLFPVILGHEGAGIVESVGEGVT   76 (368)
T ss_pred             ceEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc--CCCCceeccceeEEEEEeCCCCc
Confidence            899999888765   7888 89999999999999999999999999999887642  35789999999999999999999


Q ss_pred             CCCCCCeeEeecCcc-----------ccC----------------------------CCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEK-----------ALD----------------------------HPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~-----------~~~----------------------------~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||+|+..+...           ...                            .....|+|++|+.++...++++|
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  156 (368)
T cd08300          77 SVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKIN  156 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCC
Confidence            999999998752100           000                            00024699999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++++.+++++.|||+++ +...+++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|+++
T Consensus       157 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~-G~~~vi~~~~~~~~~~~~~~lGa~~  234 (368)
T cd08300         157 PEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAA-GASRIIGIDINPDKFELAKKFGATD  234 (368)
T ss_pred             CCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCE
Confidence            9999999999999999999987 568899999999998 799999999999996 98 6889999999999999999999


Q ss_pred             EeeCCCC--cccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCC-----c--e----EE---EE
Q 021628          200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPP-----A--S----SF---VL  254 (310)
Q Consensus       200 ~~~~~~~--~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~-----~--~----~~---~~  254 (310)
                      ++++.+.  ++..     ...++|+|||++|.   ...++++++++ |+++.+|......     .  +    .+   ..
T Consensus       235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  314 (368)
T cd08300         235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAF  314 (368)
T ss_pred             EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEe
Confidence            9887543  2211     12379999999984   47889999886 9999998652110     0  0    00   01


Q ss_pred             --ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          255 --TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       255 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                        .....++.++++++.++++++...++++|+++|+++|++.+.+++. .|++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence              1124678899999999999875566899999999999999988775 488774

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.4e-40  Score=292.16  Aligned_cols=289  Identities=18%  Similarity=0.207  Sum_probs=224.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecC-HHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALN-PIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~-~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      ||++++.++++    ++++ +.|.|++++|||+||+.+++|| ++|++.+.|.++..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~ka~~~~~~~~----l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         2 TQAIVLSGPNQ----IELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             ceEEEEeCCCe----EEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            79999987665    5898 8999999999999999999995 799998888764322 367999999999999999999


Q ss_pred             CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEc
Q 021628           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (310)
                      + ++++||||+...........+..|+|+||+.+|.+.++++|++++++. +.+. .+.+||++++... .++++|+|+|
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~-~~~~~vlV~G  152 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE-VKVLPDLIVG  152 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc-cCCCcEEEEC
Confidence            8 699999998743211111112369999999999999999999999864 4444 4679999996543 4689999998


Q ss_pred             CCcchHHHHHHHHHhhcCCcEE-EEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHHHHhhccc
Q 021628          159 GAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKE  234 (310)
Q Consensus       159 ~~g~~G~~a~~la~~~~g~~vi-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~  234 (310)
                       +|++|++++|+|+.+ |++++ +++.+++|++.+.++   .++++.+.    ...++|+||||+|+   +..+++++++
T Consensus       153 -~G~vG~~a~q~ak~~-G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----~~~g~Dvvid~~G~~~~~~~~~~~l~~  223 (308)
T TIGR01202       153 -HGTLGRLLARLTKAA-GGSPPAVWETNPRRRDGATGY---EVLDPEKD----PRRDYRAIYDASGDPSLIDTLVRRLAK  223 (308)
T ss_pred             -CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHhhhhc---cccChhhc----cCCCCCEEEECCCCHHHHHHHHHhhhc
Confidence             899999999999996 98755 455677777766543   34443221    23579999999985   4788999999


Q ss_pred             CCEEEEEeCCCCCCce----------EEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCc
Q 021628          235 GGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG  302 (310)
Q Consensus       235 ~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  302 (310)
                      +|+++.+|....+..+          .+..  .....++++++++++++++++...+++.|+++|+++|++.+.++...+
T Consensus       224 ~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~  303 (308)
T TIGR01202       224 GGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCL  303 (308)
T ss_pred             CcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCce
Confidence            9999999865322111          1111  113467999999999999988666789999999999999987776678


Q ss_pred             cEEEE
Q 021628          303 KVVIH  307 (310)
Q Consensus       303 k~vi~  307 (310)
                      |++|+
T Consensus       304 Kv~~~  308 (308)
T TIGR01202       304 KMILD  308 (308)
T ss_pred             EEEeC
Confidence            98874

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3.5e-40  Score=297.91  Aligned_cols=298  Identities=22%  Similarity=0.276  Sum_probs=230.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCC-------CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-------EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-------~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (310)
                      |||+++.++++.    +++ ++|.|+++       +|||+||+.++|||++|++.+.|.++   ..+|.++|||++|+|+
T Consensus         3 mka~v~~~~~~~----~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~---~~~p~i~GhE~~G~V~   74 (393)
T TIGR02819         3 NRGVVYLGPGKV----EVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT---APTGLVLGHEITGEVI   74 (393)
T ss_pred             ceEEEEecCCce----eEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC---CCCCccccceeEEEEE
Confidence            999999988865    888 89998874       68999999999999999999988642   3568999999999999


Q ss_pred             EeCCCCCCCCCCCeeEeecCc------------------cc------cCCC----CCCCcceeEEEEecC--ccccCCCC
Q 021628           74 KVGSQVKKFKVGDEVYGDINE------------------KA------LDHP----KRNGSLAEYTAVEEN--LLALKPKN  123 (310)
Q Consensus        74 ~~g~~~~~~~~Gd~V~~~~~~------------------~~------~~~~----~~~g~~~~~~~~~~~--~~~~ip~~  123 (310)
                      ++|+++.++++||||...+..                  ..      ..+.    ...|+|+||+++|..  .++++|++
T Consensus        75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~  154 (393)
T TIGR02819        75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR  154 (393)
T ss_pred             EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence            999999999999999764210                  00      0000    135999999999964  79999998


Q ss_pred             CCh----hhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHHHHcCCC
Q 021628          124 LSF----VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLRSLGAD  198 (310)
Q Consensus       124 ~~~----~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~~~~g~~  198 (310)
                      ++.    ..++.+.+.+.++|+++...++++|++|+|.| +|++|++++++|+.+ |++++++ +++++|++.++++|++
T Consensus       155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~-Ga~~vi~~d~~~~r~~~a~~~Ga~  232 (393)
T TIGR02819       155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG-AGPVGLAAAASAQLL-GAAVVIVGDLNPARLAQARSFGCE  232 (393)
T ss_pred             ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHcCCe
Confidence            653    34667777888999999878899999999977 899999999999996 9876554 5688899999999997


Q ss_pred             EEeeCCCCccc----cc--CCCccEEEeCCCC-----------------hHHHHhhcccCCEEEEEeCCCC-CC-c----
Q 021628          199 LAIDYTKENIE----DL--PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSVT-PP-A----  249 (310)
Q Consensus       199 ~~~~~~~~~~~----~~--~~~~dvvi~~~g~-----------------~~~~~~~l~~~G~~v~~g~~~~-~~-~----  249 (310)
                      .+....+.++.    ..  ..++|++||++|.                 +++++++++++|+++.+|.+.. .. .    
T Consensus       233 ~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~  312 (393)
T TIGR02819       233 TVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAA  312 (393)
T ss_pred             EEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccc
Confidence            54333322221    11  2479999999983                 4788999999999999997521 11 0    


Q ss_pred             -----eEEEE------------e-cC-HHHHHHHHHHHHcCCeeEEecCC-cccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          250 -----SSFVL------------T-SD-GSILEKLNPYFESGKVKAIIDPK-GPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       250 -----~~~~~------------~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                           +++..            . .. ...+.++++++.++++++...++ ++|+++|+++||+.+.+++. +|++|+++
T Consensus       313 ~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~~  391 (393)
T TIGR02819       313 AKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDPH  391 (393)
T ss_pred             ccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeCC
Confidence                 00100            0 01 12346789999999998754445 78999999999999988755 79999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3e-40  Score=297.48  Aligned_cols=297  Identities=22%  Similarity=0.270  Sum_probs=242.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.   ++++ +.|.|+++++||+||+.++++|++|++.+.|..+  ...+|.++|||++|+|+++|+++.
T Consensus         3 ~ka~~~~~~~~~---~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~   76 (369)
T cd08301           3 CKAAVAWEAGKP---LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ--TPLFPRILGHEAAGIVESVGEGVT   76 (369)
T ss_pred             cEEEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC--CCCCCcccccccceEEEEeCCCCC
Confidence            899999988765   7888 8999999999999999999999999999988753  346789999999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------c-----------------CC-----CCCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINEKA------------------L-----------------DH-----PKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~-----------------~~-----~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      ++++||+|++.+....                  .                 .+     ....|+|++|+++|...++++
T Consensus        77 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  156 (369)
T cd08301          77 DLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKI  156 (369)
T ss_pred             ccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEEC
Confidence            9999999987532100                  0                 00     002488999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      |+++++++++++++++.|+|+++ +..++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|++
T Consensus       157 P~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~-G~~~vi~~~~~~~~~~~~~~~Ga~  234 (369)
T cd08301         157 NPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIR-GASRIIGVDLNPSKFEQAKKFGVT  234 (369)
T ss_pred             CCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999987 568899999999998 699999999999996 88 789999999999999999999


Q ss_pred             EEeeCCCC--ccc----c-cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCc-----------eEEEEe-
Q 021628          199 LAIDYTKE--NIE----D-LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPA-----------SSFVLT-  255 (310)
Q Consensus       199 ~~~~~~~~--~~~----~-~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~-----------~~~~~~-  255 (310)
                      .+++....  .+.    . ..+++|++||++|.   ...++++++++ |+++.+|....+..           ..+... 
T Consensus       235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~  314 (369)
T cd08301         235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL  314 (369)
T ss_pred             eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence            88876542  221    1 12379999999974   47889999996 99999986532111           111110 


Q ss_pred             ----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          256 ----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       256 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                          ....+++++++++.++.++....++++|+++|+++|++.+.+++.. |++|
T Consensus       315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence                1134688899999999987755567899999999999999988875 8776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.9e-40  Score=297.80  Aligned_cols=296  Identities=23%  Similarity=0.270  Sum_probs=240.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++++.   ++++ +.|.|+++++||+||+.++++|++|++.+.+..     .+|.++|||++|+|+++|+++.
T Consensus        13 mka~~~~~~~~~---~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~   83 (378)
T PLN02827         13 CRAAVAWGAGEA---LVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVT   83 (378)
T ss_pred             eEEEEEecCCCC---ceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCc
Confidence            899999987754   6888 899999999999999999999999999887642     3578999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc----------------------------------CC-----CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEKAL----------------------------------DH-----PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~----------------------------------~~-----~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||+|+..+.....                                  .+     ....|+|++|+.+|...++++|
T Consensus        84 ~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP  163 (378)
T PLN02827         84 EFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVD  163 (378)
T ss_pred             ccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECC
Confidence            99999999876421000                                  00     0024899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++++.+++++.++|+++ +.+++++|++|+|+| +|++|++++|+|+.+ |++ +++++.++++++.++++|+++
T Consensus       164 ~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~-G~~~vi~~~~~~~~~~~a~~lGa~~  241 (378)
T PLN02827        164 PLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLR-GASQIIGVDINPEKAEKAKTFGVTD  241 (378)
T ss_pred             CCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence            9999999999998988999877 568899999999999 799999999999996 885 666777999999999999998


Q ss_pred             EeeCCCC--cccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEe--
Q 021628          200 AIDYTKE--NIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLT--  255 (310)
Q Consensus       200 ~~~~~~~--~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~--  255 (310)
                      ++++++.  ++..     ...++|+|||++|.   +..+++.++++ |+++.+|.......+           .+...  
T Consensus       242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (378)
T PLN02827        242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF  321 (378)
T ss_pred             EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence            8876542  2211     12379999999984   47899999998 999999865321111           11110  


Q ss_pred             ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                         ....++..+++++.++++++...+++.|+++++++|++.+.+++. +|+||++
T Consensus       322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence               013468889999999999875456789999999999999998877 5999875

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.2e-39  Score=293.03  Aligned_cols=298  Identities=22%  Similarity=0.295  Sum_probs=236.0

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ||+.+...+.. ..+++. +.+.|.++++||+||+.++++|++|++.+.|.++  ...+|.++|||++|+|+++|+++.+
T Consensus         6 ~a~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~   81 (375)
T PLN02178          6 KAFGWAANDES-GVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG--FSRYPIIPGHEIVGIATKVGKNVTK   81 (375)
T ss_pred             eeEEEEEccCC-CCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC--CCCCCcccCceeeEEEEEECCCCCc
Confidence            45555555554 447887 8888999999999999999999999999988652  2346889999999999999999999


Q ss_pred             CCCCCeeEeecC----c---------------ccc-------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccch
Q 021628           82 FKVGDEVYGDIN----E---------------KAL-------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (310)
Q Consensus        82 ~~~Gd~V~~~~~----~---------------~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (310)
                      +++||+|...+.    +               ...       .+....|+|++|+++|.+.++++|++++++++++++++
T Consensus        82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~  161 (375)
T PLN02178         82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCA  161 (375)
T ss_pred             cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhcc
Confidence            999999974210    0               000       01123699999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcc--cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCC-ccccc
Q 021628          136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKE-NIEDL  211 (310)
Q Consensus       136 ~~ta~~al~~~~--~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~-~~~~~  211 (310)
                      ..|+|+++....  .++|++|+|.| +|++|++++|+|+.+ |+++++++.+++ +.+.++++|++++++..+. .....
T Consensus       162 ~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~-Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~  239 (375)
T PLN02178        162 GITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAF-GLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA  239 (375)
T ss_pred             chHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHc-CCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence            999999985433  46899999998 699999999999996 999988887655 4677789999998876432 11122


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc----------eEEEE--ecCHHHHHHHHHHHHcCCeeEE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL--TSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ..++|++|||+|.   +..++++++++|+++.+|....+..          ..+..  .....++.++++++.+|++++.
T Consensus       240 ~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~  319 (375)
T PLN02178        240 VGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD  319 (375)
T ss_pred             hCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc
Confidence            2479999999984   4789999999999999986432111          11111  1134678999999999999875


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +   +.|+++|+++|++.+.+++..||+++++
T Consensus       320 i---~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        320 I---ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             E---EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            3   5799999999999999999889999875

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.3e-39  Score=289.16  Aligned_cols=298  Identities=23%  Similarity=0.302  Sum_probs=240.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |+++++..+++.   ++++ +++.|+++++||+||+.++++|++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        10 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~E~~G~Vv~vG~~v~   83 (357)
T PLN02514         10 TTGWAARDPSGH---LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG--MSNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_pred             EEEEEEecCCCC---ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC--cCCCCccCCceeeEEEEEECCCcc
Confidence            579999999976   7888 8999999999999999999999999999988653  234688999999999999999999


Q ss_pred             CCCCCCeeEeecC----c--------c--------c------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628           81 KFKVGDEVYGDIN----E--------K--------A------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (310)
Q Consensus        81 ~~~~Gd~V~~~~~----~--------~--------~------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (310)
                      ++++||+|+..+.    +        .        +      ..+....|+|++|+++|...++++|+++++++++.+++
T Consensus        84 ~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (357)
T PLN02514         84 KFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLC  163 (357)
T ss_pred             cccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhh
Confidence            9999999974210    0        0        0      00112369999999999999999999999999999999


Q ss_pred             hHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCC-ccccc
Q 021628          135 ATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIEDL  211 (310)
Q Consensus       135 ~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~  211 (310)
                      ++.|||+++. ....++|++|+|+| +|++|++++++|+.+ |++++++++++++++.+ +++|++.+++..+. .....
T Consensus       164 ~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~-G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~  241 (357)
T PLN02514        164 AGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEA  241 (357)
T ss_pred             hHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHh
Confidence            9999999985 45568999999997 799999999999996 99999888887776555 67999877664332 12223


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEE--EecCHHHHHHHHHHHHcCCeeEE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFV--LTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ..++|++||++|.   ...++++++++|+++.+|....+..+          .+.  ......++.++++++.++++.+.
T Consensus       242 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~  321 (357)
T PLN02514        242 ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSM  321 (357)
T ss_pred             cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCc
Confidence            3479999999983   57899999999999999865321111          111  11234578999999999998754


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                         .+.|+++|+.+|++.+.++...+|++++++
T Consensus       322 ---i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        322 ---IEVVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             ---EEEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence               257999999999999999998899999874

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-39  Score=288.63  Aligned_cols=297  Identities=22%  Similarity=0.301  Sum_probs=237.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||++++++++.    +++ +.|.|++ .++||+||+.++++|++|++.+....   ...+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~~~~----~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v   72 (347)
T PRK10309          1 MKSVVNDTDGIV----RVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG---AHYYPITLGHEFSGYVEAVGSGV   72 (347)
T ss_pred             CceEEEeCCCce----EEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC---CCCCCcccccceEEEEEEeCCCC
Confidence            999999987764    888 8999987 59999999999999999987543211   12358899999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +++++||+|++.+...                  ...+....|+|++|+.+|...++++|+++++++++.+. .+.++++
T Consensus        73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            9999999998864210                  01112236999999999999999999999999998773 3455788


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc---c--CCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---L--PEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~--~~~~  215 (310)
                      +++....++|++|+|+| +|++|++++|+|+.+ |++ ++++++++++++.++++|++++++.+..+...   .  ..++
T Consensus       152 ~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~  229 (347)
T PRK10309        152 AFHLAQGCEGKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF  229 (347)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence            87778889999999998 799999999999996 987 67788899999999999999988765433211   1  2368


Q ss_pred             c-EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-------------ceEEEEe--c-----CHHHHHHHHHHHHcC
Q 021628          216 D-VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSFVLT--S-----DGSILEKLNPYFESG  271 (310)
Q Consensus       216 d-vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~~~~--~-----~~~~~~~~~~~~~~~  271 (310)
                      | ++|||+|.   +..++++++++|+++.+|......             ...+...  .     ..++++++++++.++
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g  309 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence            8 99999984   478999999999999998643110             0111111  0     136788999999999


Q ss_pred             CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          272 KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .+++...+++.|+++|+++|++.+.+++..||+++++
T Consensus       310 ~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        310 KLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             CCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            9976556789999999999999999988889999875

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.4e-39  Score=289.37  Aligned_cols=296  Identities=25%  Similarity=0.300  Sum_probs=240.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+.++.   ++++ +.|.|.+.++||+||+.++++|++|++.+.|..+   ..+|.++|||++|+|+++|+++.
T Consensus         3 ~ka~~~~~~~~~---~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~---~~~p~i~G~e~~G~V~~vG~~v~   75 (365)
T cd08277           3 CKAAVAWEAGKP---LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA---TLFPVILGHEGAGIVESVGEGVT   75 (365)
T ss_pred             cEEEEEccCCCC---cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC---CCCCeecccceeEEEEeeCCCCc
Confidence            799999987765   6888 8999999999999999999999999999988653   45688999999999999999999


Q ss_pred             CCCCCCeeEeecCccc------cC--------------------------------CCCCCCcceeEEEEecCccccCCC
Q 021628           81 KFKVGDEVYGDINEKA------LD--------------------------------HPKRNGSLAEYTAVEENLLALKPK  122 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip~  122 (310)
                      ++++||+|++.+....      ..                                .....|+|++|++++...++++|+
T Consensus        76 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~  155 (365)
T cd08277          76 NLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP  155 (365)
T ss_pred             cCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCC
Confidence            9999999987532100      00                                001248999999999999999999


Q ss_pred             CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEE
Q 021628          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLA  200 (310)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~  200 (310)
                      ++++++++.+++++.|||+++ +.+++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|++++
T Consensus       156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~~~~~ga~~~  233 (365)
T cd08277         156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIA-GASRIIGVDINEDKFEKAKEFGATDF  233 (365)
T ss_pred             CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence            999999999999999999987 678899999999998 799999999999996 88 68889999999999999999988


Q ss_pred             eeCCCCc--cc-----ccCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCC---C-------CceEEEE--ec-
Q 021628          201 IDYTKEN--IE-----DLPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT---P-------PASSFVL--TS-  256 (310)
Q Consensus       201 ~~~~~~~--~~-----~~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~---~-------~~~~~~~--~~-  256 (310)
                      ++..+.+  +.     ...+++|++||++|.   ...++++++++ |+++.+|....   +       ....+..  .. 
T Consensus       234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~  313 (365)
T cd08277         234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGG  313 (365)
T ss_pred             eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCC
Confidence            8765422  11     113579999999984   47899999885 99999986421   0       0111111  01 


Q ss_pred             --CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          257 --DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       257 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                        ...+++++++++.++.++....++++|+++|+++|++.+.+++. .|+++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i  364 (365)
T cd08277         314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI  364 (365)
T ss_pred             CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence              13468899999999988765566889999999999999988774 48776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=6.7e-39  Score=283.87  Aligned_cols=291  Identities=26%  Similarity=0.363  Sum_probs=237.3

Q ss_pred             CEEEEEcccCCCc--cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNSQ--SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~~--~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      ||++++.+++.+.  +.++++ +.|.|+++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS-TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCcCCCcceEEEEEEECCC
Confidence            9999999988531  347888 89999999999999999999999999999887642 2356889999999999999999


Q ss_pred             CCC-CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEE
Q 021628           79 VKK-FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (310)
Q Consensus        79 ~~~-~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (310)
                      +.+ +++||+|++...        .+|+|++|+.+|.+.++++|+++++++++.+++.+.|||.++..... ++++++|+
T Consensus        79 v~~~~~vGd~V~~~~~--------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~  149 (324)
T cd08291          79 PLAQSLIGKRVAFLAG--------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVH  149 (324)
T ss_pred             ccccCCCCCEEEecCC--------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEE
Confidence            986 999999998642        14899999999999999999999999999888888899866555555 56666665


Q ss_pred             -cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHH
Q 021628          158 -GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKA  228 (310)
Q Consensus       158 -g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~  228 (310)
                       +++|++|++++|+|+.+ |++++++++++++++.++++|++++++++..++..      ..+++|++||++|.  ....
T Consensus       150 ~~g~g~vG~~a~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~  228 (324)
T cd08291         150 TAAASALGRMLVRLCKAD-GIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQI  228 (324)
T ss_pred             ccCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHH
Confidence             77999999999999996 99999999999999999999999999876654422      12479999999984  4678


Q ss_pred             HhhcccCCEEEEEeCCCCC----C--------ceEEEEe--------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          229 LKAVKEGGRVVSIIGSVTP----P--------ASSFVLT--------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~~----~--------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      +++++++|+++.+|.....    .        ...+...        ...+.+.+++++++ +.+++.  ++++|+++|+
T Consensus       229 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--i~~~~~l~~~  305 (324)
T cd08291         229 LLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTT--FASRYPLALT  305 (324)
T ss_pred             HHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccc--eeeEEcHHHH
Confidence            9999999999999854211    0        1111110        12346778888887 777764  4688999999


Q ss_pred             HHHHHHHHcCCCCccEEE
Q 021628          289 LEAFSHLESSRATGKVVI  306 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi  306 (310)
                      ++|++.+.++...||+++
T Consensus       306 ~~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         306 LEAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             HHHHHHHHhCCCCCeEEe
Confidence            999999999988899887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=5.1e-39  Score=287.33  Aligned_cols=296  Identities=21%  Similarity=0.346  Sum_probs=237.7

Q ss_pred             EEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628            4 WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK   83 (310)
Q Consensus         4 ~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~   83 (310)
                      +++.++|++   ++++ +.|.|.++++||+||+.++++|++|++.+.+.+. ....+|.++|||++|+|+++|+++..+ 
T Consensus         2 ~~~~~~g~~---~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~-   75 (349)
T TIGR03201         2 WMMTEPGKP---MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR-TNHALPLALGHEISGRVIQAGAGAASW-   75 (349)
T ss_pred             ceEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC-ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence            567778874   5888 8999999999999999999999999998754332 123568899999999999999999877 


Q ss_pred             CCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCC------CCChhhhccccchHHHH
Q 021628           84 VGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPK------NLSFVEAASLPLATETA  139 (310)
Q Consensus        84 ~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta  139 (310)
                      +||+|+..+...                  ...+....|+|++|+++|.+.++++|+      ++++++++.+++++.++
T Consensus        76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            999998742110                  011122469999999999999999999      89999999999999999


Q ss_pred             HHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccc----c-
Q 021628          140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IED----L-  211 (310)
Q Consensus       140 ~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~----~-  211 (310)
                      |+++....+++|++|+|+|+ |++|++++++|+.+ |++++++++++++++.++++|++++++..+.+   +.+    . 
T Consensus       156 ~~a~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t  233 (349)
T TIGR03201       156 YQAAVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAM-GAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA  233 (349)
T ss_pred             HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence            99997788999999999996 99999999999996 99999999999999999999999888765432   111    1 


Q ss_pred             -CCCcc----EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEEE--ecCHHHHHHHHHHHHcC
Q 021628          212 -PEKFD----VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL--TSDGSILEKLNPYFESG  271 (310)
Q Consensus       212 -~~~~d----vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~  271 (310)
                       ..++|    ++|||+|+   ...++++++++|+++.+|....+..+          ....  .....+++++++++.++
T Consensus       234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g  313 (349)
T TIGR03201       234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG  313 (349)
T ss_pred             ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence             23565    89999985   36789999999999999865421111          1111  11346789999999999


Q ss_pred             CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          272 KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++.... +.|+++++++||+.+.+++..+|+++++
T Consensus       314 ~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       314 KIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             CCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            99865443 4699999999999999998888988863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=4.3e-39  Score=286.67  Aligned_cols=292  Identities=20%  Similarity=0.178  Sum_probs=220.1

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--DSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |++++.++++.    +++ +.|.|+ +++||+|||.++|||++|++.++|.++..  ...+|.++|||++|+|++.|.+ 
T Consensus         4 ~~~~~~~~~~~----~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-   76 (341)
T cd08237           4 QVYRLVRPKFF----EVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-   76 (341)
T ss_pred             cceEEeccceE----EEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence            57788877765    888 899995 99999999999999999999999865321  1357999999999999998764 


Q ss_pred             CCCCCCCeeEeecCccc---------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH
Q 021628           80 KKFKVGDEVYGDINEKA---------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE  144 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~---------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~  144 (310)
                       ++++||||+..+....               ..+...+|+|+||+++|.+.++++|+++++++|+.. ..++++++++.
T Consensus        77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~  154 (341)
T cd08237          77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS  154 (341)
T ss_pred             -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence             6999999987542110               011123699999999999999999999999887755 46677898884


Q ss_pred             ---hcccCCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEe
Q 021628          145 ---RSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       145 ---~~~~~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                         ...+++||+|+|+| +|++|++++++++. .++.+|++++++++|++.+++.+.++.++.    ..+ ..++|+|||
T Consensus       155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~----~~~-~~g~d~viD  228 (341)
T cd08237         155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD----IPE-DLAVDHAFE  228 (341)
T ss_pred             HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh----hhh-ccCCcEEEE
Confidence               34578999999999 79999999999986 334688899999999999987665543321    111 126999999


Q ss_pred             CCCC------hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHcC---CeeEEecC
Q 021628          221 AVGQ------CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESG---KVKAIIDP  279 (310)
Q Consensus       221 ~~g~------~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~  279 (310)
                      ++|.      +..++++++++|+++.+|....+.          ...+..  .....+++++++++.++   ..+....+
T Consensus       229 ~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i  308 (341)
T cd08237         229 CVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLV  308 (341)
T ss_pred             CCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHh
Confidence            9982      478999999999999998543211          111111  11346789999999998   22333456


Q ss_pred             Ccccch---hhHHHHHHHHHcCCCCccEEEEeC
Q 021628          280 KGPFPF---SQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       280 ~~~~~~---~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++.|++   +++.++++.+.++ ..||++|+++
T Consensus       309 ~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         309 GGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence            788997   4667777666554 6789999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.1e-38  Score=285.81  Aligned_cols=296  Identities=21%  Similarity=0.236  Sum_probs=223.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD-SPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++...+ . + ++++ +.|.|+++++||+||+.++++|++|++.+.|.++..+ ..+|.++|||++|+|+++|++ 
T Consensus         1 mka~~~~~~~-~-~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-   75 (355)
T cd08230           1 MKAIAVKPGK-P-G-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-   75 (355)
T ss_pred             CceeEecCCC-C-C-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-
Confidence            8999998533 2 3 7999 8999999999999999999999999999998753222 246789999999999999999 


Q ss_pred             CCCCCCCeeEeecCcc------cc-----C---------CC-CCCCcceeEEEEecCccccCCCCCChhhhccccchHHH
Q 021628           80 KKFKVGDEVYGDINEK------AL-----D---------HP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET  138 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------~~-----~---------~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  138 (310)
                      +.+++||+|+..+...      ..     .         +. ..+|+|++|+++|...++++|++++ + ++.+..++.+
T Consensus        76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~  153 (355)
T cd08230          76 SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSV  153 (355)
T ss_pred             CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHH
Confidence            8999999998753210      00     0         00 1369999999999999999999999 3 3444444444


Q ss_pred             HHHHHH-------hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          139 AYEGLE-------RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       139 a~~al~-------~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      +++++.       ....++|++|+|+| +|++|++++|+|+.+ |++|+++++   +++|++.++++|++.+ ++.+++.
T Consensus       154 ~~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~-G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~~  230 (355)
T cd08230         154 VEKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLR-GFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTPV  230 (355)
T ss_pred             HHHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccch
Confidence            444442       12367899999999 699999999999996 999998887   6889999999999874 5444332


Q ss_pred             c--ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CCceE--------------EEE--ecCHHHHHHHH
Q 021628          209 E--DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPASS--------------FVL--TSDGSILEKLN  265 (310)
Q Consensus       209 ~--~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~~--------------~~~--~~~~~~~~~~~  265 (310)
                      .  ....++|+||||+|+   +..++++++++|+++.+|....  ...+.              +..  ....+++++++
T Consensus       231 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~  310 (355)
T cd08230         231 AEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAV  310 (355)
T ss_pred             hhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHH
Confidence            1  123579999999984   4789999999999999986432  11111              011  11245688899


Q ss_pred             HHHHcCCee----EEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          266 PYFESGKVK----AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       266 ~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +++.++.+.    ....++++|+++|+++|++.+.++.  .|++|++
T Consensus       311 ~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         311 EDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            999887732    2234578999999999999886544  4888864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4.7e-38  Score=278.35  Aligned_cols=293  Identities=24%  Similarity=0.313  Sum_probs=244.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+++.+.+.++++ +.|.|.+.++||+||+.++++|++|++.+.|.++. ....|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY-KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC-CCCCCCCCCcceEEEEEEeCCCCC
Confidence            9999999887642357888 89999999999999999999999999999887642 234578999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~  160 (310)
                      ++++||+|+++..         .|+|++|+.++...++++|+++++++++.+++.+.++|+++...++++|++|+|+|++
T Consensus        79 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~  149 (324)
T cd08292          79 GLQVGQRVAVAPV---------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAG  149 (324)
T ss_pred             CCCCCCEEEeccC---------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccc
Confidence            9999999998642         5899999999999999999999999999999899999999877899999999999989


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      |.+|++++++|+.+ |++++++++++++.+.++++|.+++++.++.++..      ..+++|++||++|.  ...+++++
T Consensus       150 g~ig~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l  228 (324)
T cd08292         150 GAVGKLVAMLAAAR-GINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLL  228 (324)
T ss_pred             cHHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhh
Confidence            99999999999996 99999999999999988889998888776544321      12479999999884  57889999


Q ss_pred             ccCCEEEEEeCCCC-----------CCceEEEEec------------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          233 KEGGRVVSIIGSVT-----------PPASSFVLTS------------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       233 ~~~G~~v~~g~~~~-----------~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      +++|+++.+|....           ..+..+....            ....+.++++++.++.+++..  .+.|++++++
T Consensus       229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~~~~~~  306 (324)
T cd08292         229 GEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV--EAVFDLGDAA  306 (324)
T ss_pred             cCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc--ccEecHHHHH
Confidence            99999999985421           1112222111            124578899999999998542  5789999999


Q ss_pred             HHHHHHHcCCCCccEEEE
Q 021628          290 EAFSHLESSRATGKVVIH  307 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~  307 (310)
                      +|++.+.++...+|++++
T Consensus       307 ~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         307 KAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHcCCCCceEEeC
Confidence            999999888777888763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.8e-38  Score=282.08  Aligned_cols=298  Identities=28%  Similarity=0.377  Sum_probs=239.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-CC--------CCCCCcccccceeEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-AT--------DSPLPTIPGYDVAGV   71 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~--------~~~~p~~~G~e~~G~   71 (310)
                      |||+++.+++++    +++ ++|.|+++++||+||+.++++|++|+..+.+... ..        ...+|.++|||++|+
T Consensus         1 mka~~~~~~~~l----~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~   75 (351)
T cd08233           1 MKAARYHGRKDI----RVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGV   75 (351)
T ss_pred             CceEEEecCCce----EEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEE
Confidence            999999987654    889 8999999999999999999999999887654210 00        123688999999999


Q ss_pred             EEEeCCCCCCCCCCCeeEeecCcccc------------------CCC-CCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           72 VEKVGSQVKKFKVGDEVYGDINEKAL------------------DHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        72 V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                      |+++|++++++++||+|++.......                  .+. ...|+|++|+.++...++++|+++++++++.+
T Consensus        76 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~  155 (351)
T cd08233          76 VVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV  155 (351)
T ss_pred             EEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence            99999999999999999874321000                  001 12599999999999999999999999988766


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-  210 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  210 (310)
                       ..+.+||+++...++++|++|+|+| +|.+|.+++|+|+.+ |+ +++++++++++.+.++++|++.++++++.++.. 
T Consensus       156 -~~~~ta~~~l~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~-G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~  232 (351)
T cd08233         156 -EPLAVAWHAVRRSGFKPGDTALVLG-AGPIGLLTILALKAA-GASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAE  232 (351)
T ss_pred             -cHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHH
Confidence             5778999999878899999999998 699999999999996 98 788888899999999999999998877654322 


Q ss_pred             ---c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHc
Q 021628          211 ---L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFES  270 (310)
Q Consensus       211 ---~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~  270 (310)
                         .  .+++|++||++|.   .+.++++++++|+++.+|....+.          ...+..  .....+++++++++.+
T Consensus       233 l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  312 (351)
T cd08233         233 VRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLAS  312 (351)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHc
Confidence               1  2369999999973   478999999999999998654211          112111  1234679999999999


Q ss_pred             CCeeEEecCCcccchhhH-HHHHHHHHcCCCC-ccEEE
Q 021628          271 GKVKAIIDPKGPFPFSQT-LEAFSHLESSRAT-GKVVI  306 (310)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~-~k~vi  306 (310)
                      +++++...++++|+++|+ ++|++.+.+++.. +|++|
T Consensus       313 g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         313 GKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             CCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            999764445688999996 7999999888864 89887

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=5.4e-38  Score=286.10  Aligned_cols=302  Identities=23%  Similarity=0.290  Sum_probs=231.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHH-hCCCCC----CCCCCCcccccceeEEEEEe
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSA----TDSPLPTIPGYDVAGVVEKV   75 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~----~~~~~p~~~G~e~~G~V~~~   75 (310)
                      ||++++.++++.    +++ +.|.|+++++||+||+.++|+|++|++.+ .|....    ....+|.++|||++|+|+++
T Consensus         3 ~~a~~~~~~~~l----~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v   77 (410)
T cd08238           3 TKAWRMYGKGDL----RLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV   77 (410)
T ss_pred             cEEEEEEcCCce----EEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence            889999887764    899 89999999999999999999999999976 453211    11246889999999999999


Q ss_pred             CCCCC-CCCCCCeeEeecCcccc-------CCCCCCCcceeEEEEecC----ccccCCCCCChhhhccc-cchH-HHHHH
Q 021628           76 GSQVK-KFKVGDEVYGDINEKAL-------DHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASL-PLAT-ETAYE  141 (310)
Q Consensus        76 g~~~~-~~~~Gd~V~~~~~~~~~-------~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~~-~ta~~  141 (310)
                      |+++. .+++||||++.+.....       .+...+|+|++|+++|.+    .++++|+++++++++.+ +.++ .++++
T Consensus        78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~  157 (410)
T cd08238          78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT  157 (410)
T ss_pred             CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence            99997 59999999875321110       011236999999999986    68999999999998865 4332 23443


Q ss_pred             HH---------HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecChhhHHHHHHc--------CCC-EE
Q 021628          142 GL---------ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSL--------GAD-LA  200 (310)
Q Consensus       142 al---------~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~~~~~~~~~~~--------g~~-~~  200 (310)
                      ++         +.+++++|++|+|+|++|++|++++|+|+.+ |.   +|++++.+++|++.++++        |++ .+
T Consensus       158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~-G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~  236 (410)
T cd08238         158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHG-PIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY  236 (410)
T ss_pred             hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc-ccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence            32         3467899999999998999999999999985 54   789999999999999887        665 45


Q ss_pred             eeCCC-Ccccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-C--CCce----------EEEE--e
Q 021628          201 IDYTK-ENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T--PPAS----------SFVL--T  255 (310)
Q Consensus       201 ~~~~~-~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~--~~~~----------~~~~--~  255 (310)
                      +++.+ +++..      ...++|++||++|+   ...++++++++|+++.++... .  ...+          .+..  .
T Consensus       237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~  316 (410)
T cd08238         237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG  316 (410)
T ss_pred             ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC
Confidence            66543 22211      12479999999874   478999999999988775421 1  1111          1111  1


Q ss_pred             cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          256 SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ....+++++++++.+|++++...++++|+++++++|++.+. ++..||++|.++
T Consensus       317 ~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~  369 (410)
T cd08238         317 GNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ  369 (410)
T ss_pred             CCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence            23467899999999999998666789999999999999998 777899998763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.2e-37  Score=275.19  Aligned_cols=296  Identities=27%  Similarity=0.371  Sum_probs=243.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++..++..   ++++ +.|.|++.++||+||+.++++|++|+..+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~p~~~g~e~~G~v~~vG~~v~   74 (333)
T cd08296           1 YKAVQVTEPGGP---LELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG--LSYPRVPGHEVVGRIDAVGEGVS   74 (333)
T ss_pred             CeEEEEccCCCC---ceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC--CCCCcccCcceeEEEEEECCCCc
Confidence            999999998543   5888 89999999999999999999999999999886532  34578899999999999999999


Q ss_pred             CCCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||+|++.+.                   ..+..+....|++++|+.++...++++|+++++.+++.+++++.++|+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            9999999986321                   000111223589999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV  218 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvv  218 (310)
                      ++...++.++++|+|+| +|.+|++++++|+.+ |++++++++++++++.++++|++++++....++..   ..+++|++
T Consensus       155 ~~~~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v  232 (333)
T cd08296         155 ALRNSGAKPGDLVAVQG-IGGLGHLAVQYAAKM-GFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI  232 (333)
T ss_pred             HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence            99766899999999999 899999999999996 99999999999999999999999988876544321   12479999


Q ss_pred             EeCCC---ChHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628          219 FDAVG---QCDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPF  283 (310)
Q Consensus       219 i~~~g---~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (310)
                      +|+.|   ....++++++++|+++.+|.....          ...++..  .....++..+++++.++.+++.   .+.|
T Consensus       233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~  309 (333)
T cd08296         233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPM---VETF  309 (333)
T ss_pred             EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCce---EEEE
Confidence            99976   357899999999999999865311          1111111  1235678889999998888764   2579


Q ss_pred             chhhHHHHHHHHHcCCCCccEEEE
Q 021628          284 PFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++.+|++.+.+++.+||++++
T Consensus       310 ~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         310 PLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             EHHHHHHHHHHHHCCCCceeEEeC
Confidence            999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.8e-37  Score=252.79  Aligned_cols=295  Identities=28%  Similarity=0.415  Sum_probs=242.4

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |+++|.++|+++++++++ +++.|+...++|+|+..+++|+++|+..++|.||.. +.+|.+-|+|++|+|+.+|+++.+
T Consensus        21 kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-P~~PAVgGnEGv~eVv~vGs~vkg   98 (354)
T KOG0025|consen   21 KALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-PELPAVGGNEGVGEVVAVGSNVKG   98 (354)
T ss_pred             ceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-CCCCcccCCcceEEEEEecCCcCc
Confidence            799999999999999999 899999888889999999999999999999999854 567899999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~  160 (310)
                      |++||+|+....        ..|+|++|.+.+.+.++++++.++.+.||++..+.+|||++|+ ...+.+||+|+..|+.
T Consensus        99 fk~Gd~VIp~~a--------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNgan  170 (354)
T KOG0025|consen   99 FKPGDWVIPLSA--------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGAN  170 (354)
T ss_pred             cCCCCeEeecCC--------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcc
Confidence            999999998763        3799999999999999999999999999999999999999995 6899999999999999


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEEeeCCCC---ccc---ccCCCccEEEeCCC--ChHHH
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAIDYTKE---NIE---DLPEKFDVVFDAVG--QCDKA  228 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~---~~~---~~~~~~dvvi~~~g--~~~~~  228 (310)
                      +++|++.+|+|+++ |++.+-++|+....+.+    +.+|+++++...+-   ...   ....++.+.|||+|  +.-+.
T Consensus       171 S~VG~~ViQlaka~-GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~i  249 (354)
T KOG0025|consen  171 SGVGQAVIQLAKAL-GIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEI  249 (354)
T ss_pred             cHHHHHHHHHHHHh-CcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHH
Confidence            99999999999996 99999999877766555    56899998743221   111   12346889999998  45788


Q ss_pred             HhhcccCCEEEEEeCCCC-CCceE---------------EEEec--------CHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628          229 LKAVKEGGRVVSIIGSVT-PPASS---------------FVLTS--------DGSILEKLNPYFESGKVKAIIDPKGPFP  284 (310)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~-~~~~~---------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (310)
                      .+.|..||.++.+|++.. +..+.               ...+.        +.+.+.++.++++.|++....  ....+
T Consensus       250 ar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~  327 (354)
T KOG0025|consen  250 ARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVP  327 (354)
T ss_pred             HHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeee
Confidence            899999999999998751 11111               11111        125578899999999998753  35678


Q ss_pred             hhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628          285 FSQTLEAFSHLESSR-ATGKVVIHPI  309 (310)
Q Consensus       285 ~~~~~~a~~~~~~~~-~~~k~vi~~~  309 (310)
                      +++-..|++...+.. ..+|-++.++
T Consensus       328 L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  328 LADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             chhhhHHHHHHHHHhccCCceEEEec
Confidence            888888887654433 3356666553

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.8e-37  Score=274.93  Aligned_cols=299  Identities=26%  Similarity=0.324  Sum_probs=242.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++    +++ +.+.|.+.++||+||+.++++|++|++.+.+.++.  ..+|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~~----~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~--~~~~~~~G~e~~G~V~~vG~~v~   73 (351)
T cd08285           1 MKAFAMLGIGKV----GWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG--ERHGMILGHEAVGVVEEVGSEVK   73 (351)
T ss_pred             CceEEEccCCcc----EEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC--CCCCcccCcceEEEEEEecCCcC
Confidence            999999998866    888 88989899999999999999999999988876532  35688999999999999999999


Q ss_pred             CCCCCCeeEeecCcc---------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHH
Q 021628           81 KFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATE  137 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~  137 (310)
                      ++++||+|++.+...                     +..+....|+|++|+.++.+  .++++|+++++++++.+++.+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence            999999999743100                     00011236899999999974  8999999999999999998999


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------  210 (310)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------  210 (310)
                      ||++++..+.+++|++|+|+| +|.+|++++++|+.+ |+. ++++++++++.+.++++|++++++..+.++..      
T Consensus       154 ta~~~~~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (351)
T cd08285         154 TGFHGAELANIKLGDTVAVFG-IGPVGLMAVAGARLR-GAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT  231 (351)
T ss_pred             hHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence            999998778899999999997 799999999999996 885 77778889999999999999988876544321      


Q ss_pred             cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC--ce------------EEEE---ecCHHHHHHHHHHHHc
Q 021628          211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP--AS------------SFVL---TSDGSILEKLNPYFES  270 (310)
Q Consensus       211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~--~~------------~~~~---~~~~~~~~~~~~~~~~  270 (310)
                      ...++|++||++|.   ...++++++++|+++.+|......  .+            .+..   ....++++++++++.+
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  311 (351)
T cd08285         232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEY  311 (351)
T ss_pred             CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHc
Confidence            12479999999884   478999999999999987543211  00            1111   1124678899999999


Q ss_pred             CCeeEEe-cCCcccchhhHHHHHHHHHcCC-CCccEEEEe
Q 021628          271 GKVKAII-DPKGPFPFSQTLEAFSHLESSR-ATGKVVIHP  308 (310)
Q Consensus       271 ~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~  308 (310)
                      +++++.. ...+.|+++++++|++.+.+++ ...|++|+|
T Consensus       312 g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         312 GRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            9998732 2345699999999999998887 467999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=9.5e-37  Score=274.05  Aligned_cols=298  Identities=28%  Similarity=0.360  Sum_probs=238.8

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |++++.++++.   ++++ +.+.|.++++||+||+.++++|++|+....|.++.  ..+|.++|||++|+|+++|+++.+
T Consensus         2 ka~~~~~~~~~---l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~   75 (361)
T cd08231           2 RAAVLTGPGKP---LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR--VPLPIILGHEGVGRVVALGGGVTT   75 (361)
T ss_pred             eEEEEcCCCCC---CEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC--CCCCcccccCCceEEEEeCCCccc
Confidence            89999998844   6999 89999999999999999999999999999887631  456889999999999999999976


Q ss_pred             ------CCCCCeeEeecCcc------------------ccCC-------CCCCCcceeEEEEecC-ccccCCCCCChhhh
Q 021628           82 ------FKVGDEVYGDINEK------------------ALDH-------PKRNGSLAEYTAVEEN-LLALKPKNLSFVEA  129 (310)
Q Consensus        82 ------~~~Gd~V~~~~~~~------------------~~~~-------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a  129 (310)
                            +++||+|++.+.-.                  +..+       ....|+|++|+.++.. .++++|++++...+
T Consensus        76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a  155 (361)
T cd08231          76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA  155 (361)
T ss_pred             cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence                  99999998863100                  0000       1135999999999986 79999999999999


Q ss_pred             ccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628          130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (310)
Q Consensus       130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (310)
                      +.+++++.|||+++. ....++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++.+++.+..+
T Consensus       156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~  233 (361)
T cd08231         156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLA-GARRVIVIDGSPERLELAREFGADATIDIDELP  233 (361)
T ss_pred             HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccc
Confidence            998899999999995 45556999999998 799999999999996 99 888899999999999999998888765433


Q ss_pred             cc-------cc--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEEE--ecCHHHH
Q 021628          208 IE-------DL--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFVL--TSDGSIL  261 (310)
Q Consensus       208 ~~-------~~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~~--~~~~~~~  261 (310)
                      ..       ..  .+++|++||++|.   ...++++++++|+++.+|.....            ....+..  ....+.+
T Consensus       234 ~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (361)
T cd08231         234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHL  313 (361)
T ss_pred             cHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhH
Confidence            21       11  2479999999874   47889999999999999854311            1111111  1235678


Q ss_pred             HHHHHHHHcC--CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          262 EKLNPYFESG--KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       262 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .++++++.++  .+.+...++++|+++++++|++.+.++.. +|++|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         314 YRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             HHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            8899999988  54444345788999999999999988764 6988864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.1e-36  Score=272.02  Aligned_cols=280  Identities=25%  Similarity=0.331  Sum_probs=221.6

Q ss_pred             cceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEee
Q 021628           14 SVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD   91 (310)
Q Consensus        14 ~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~   91 (310)
                      +.++++ +.|.|++ ++|||+|||.++|||+.|......... .....+|.++|||++|+|+++|++++++++||+|+++
T Consensus        21 ~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          21 ENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             cceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            578988 8999987 499999999999999998654432111 0123467889999999999999999999999999874


Q ss_pred             cCccccCCCCCCCcceeEEEEecCccccCCCCCChhh----hccccchHHHHHHHH-HhcccCCC--CEEEEEcCCcchH
Q 021628           92 INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE----AASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVG  164 (310)
Q Consensus        92 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~g~~g~~G  164 (310)
                                 .++|++|++++.+.++++|+++++.+    ++.+++++.|||+++ +.+++++|  ++|+|+|++|++|
T Consensus       100 -----------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG  168 (345)
T cd08293         100 -----------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACG  168 (345)
T ss_pred             -----------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHH
Confidence                       25799999999999999999864322    455677899999998 56778877  9999999889999


Q ss_pred             HHHHHHHHhhcCC-cEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhcccC
Q 021628          165 TMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEG  235 (310)
Q Consensus       165 ~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~  235 (310)
                      ++++|+|+.+ |+ +|+++++++++.+.+++ +|+++++++.++++..     ..+++|++||++|.  ...++++|+++
T Consensus       169 ~~aiqlAk~~-G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~  247 (345)
T cd08293         169 SLAGQIGRLL-GCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNEN  247 (345)
T ss_pred             HHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccC
Confidence            9999999996 98 79999999999998876 9999998876655422     13589999999884  57899999999


Q ss_pred             CEEEEEeCCCC--------C------------CceEEEE---ecC----HHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          236 GRVVSIIGSVT--------P------------PASSFVL---TSD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       236 G~~v~~g~~~~--------~------------~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      |+++.+|....        +            ....+..   ...    .+.++++++++.++.+++..  ...|+++++
T Consensus       248 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~  325 (345)
T cd08293         248 SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE--TVYEGLENA  325 (345)
T ss_pred             CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee--EEeecHHHH
Confidence            99999874210        0            0111111   111    23467788999999998753  245699999


Q ss_pred             HHHHHHHHcCCCCccEEEEe
Q 021628          289 LEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++|++.+.+++..||+++++
T Consensus       326 ~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         326 GEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHhcCCCCCeEEEEC
Confidence            99999999998889999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.9e-36  Score=269.76  Aligned_cols=289  Identities=28%  Similarity=0.357  Sum_probs=230.1

Q ss_pred             CEEEEEcccCCCccceEEeccccC----CCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccce--eEEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEV----PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV--AGVVEK   74 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~----~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~   74 (310)
                      ||+|+...+. . +.|+++ +.+.    |+|++|||+|||.++++|+.|+....|.+.. ....|.++|++.  .|.+..
T Consensus         8 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~-~~~~p~~~g~~~~g~~~~~~   83 (338)
T cd08295           8 LKAYVTGFPK-E-SDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS-LYLPPFKPGEVITGYGVAKV   83 (338)
T ss_pred             EecCCCCCCC-c-cceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc-ccCCCcCCCCeEeccEEEEE
Confidence            4566644444 3 678998 8877    8899999999999999999999988885321 124577888754  455556


Q ss_pred             eCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEec-CccccCC-CCCChh-hhccccchHHHHHHHH-HhcccCC
Q 021628           75 VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKP-KNLSFV-EAASLPLATETAYEGL-ERSAFSA  150 (310)
Q Consensus        75 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al-~~~~~~~  150 (310)
                      +|++++++++||+|+++            |+|+||+++|. ..++++| +++++. +++.+++++.|||+++ +.+++++
T Consensus        84 v~~~v~~~~vGd~V~~~------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  151 (338)
T cd08295          84 VDSGNPDFKVGDLVWGF------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKK  151 (338)
T ss_pred             EecCCCCCCCCCEEEec------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCC
Confidence            77888889999999873            68999999999 7999995 678876 7888999999999999 5689999


Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCC-cccc-----cCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKE-NIED-----LPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g  223 (310)
                      |++|+|+|++|++|++++|+|+.+ |++++++++++++.+.+++ +|+++++++.++ ++..     ...++|++||++|
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~-G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g  230 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLK-GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG  230 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence            999999998899999999999996 9999999999999999988 999998886432 3321     1358999999998


Q ss_pred             C--hHHHHhhcccCCEEEEEeCCCCC--------Cc--------eEEEE---ecC----HHHHHHHHHHHHcCCeeEEec
Q 021628          224 Q--CDKALKAVKEGGRVVSIIGSVTP--------PA--------SSFVL---TSD----GSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~~~--------~~--------~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      .  ...++++++++|+++.+|.....        ..        ..+..   ...    .+.+.++++++.++.+++.. 
T Consensus       231 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-  309 (338)
T cd08295         231 GKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVE-  309 (338)
T ss_pred             HHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEcee-
Confidence            4  57899999999999998753210        00        01111   111    24477889999999998753 


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                       ...|+++++++|++.+.+++..||+++++
T Consensus       310 -~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         310 -DIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             -ecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence             34699999999999999999899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.7e-36  Score=267.56  Aligned_cols=295  Identities=29%  Similarity=0.382  Sum_probs=246.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++|.+ ..++++ +.+.|.+.++||+||+.++++|++|+....|.++.  ..+|.++|||++|+|+.+|++++
T Consensus         2 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (327)
T PRK10754          2 AKRIEFHKHGGP-EVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP--PSLPSGLGTEAAGVVSKVGSGVK   77 (327)
T ss_pred             ceEEEEeccCCh-hHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC--CCCCCccCcceEEEEEEeCCCCC
Confidence            999999999988 889999 89999999999999999999999999988886632  34577899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|++..        ...|+|++|+.++...++++|+++++++++.+++.+.++|+++ ..+++.+|++|+|+|+
T Consensus        78 ~~~~Gd~V~~~~--------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~  149 (327)
T PRK10754         78 HIKVGDRVVYAQ--------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_pred             CCCCCCEEEECC--------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence            999999998642        1258999999999999999999999999999988999999998 4688999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|.+|++++++|+.+ |++++.+++++++.+.++++|.+++++.+..++..      ..+++|++|||+|.  ....+++
T Consensus       150 ~g~ig~~~~~lak~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~  228 (327)
T PRK10754        150 AGGVGLIACQWAKAL-GAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDC  228 (327)
T ss_pred             CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHH
Confidence            999999999999996 99999999999999999999998888766544321      12479999999874  4788999


Q ss_pred             cccCCEEEEEeCCCCC-C--ce--------EEEEe-------cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          232 VKEGGRVVSIIGSVTP-P--AS--------SFVLT-------SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-~--~~--------~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      ++++|+++.+|..... .  ..        .+...       ..    ...+.++++++.++.+++....++.|++++++
T Consensus       229 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~  308 (327)
T PRK10754        229 LQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQ  308 (327)
T ss_pred             hccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHH
Confidence            9999999999854311 0  00        11000       01    12356788999999998755557899999999


Q ss_pred             HHHHHHHcCCCCccEEEEe
Q 021628          290 EAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++.+.++...+|++|.+
T Consensus       309 ~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        309 RAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHHHcCCCcceEEEeC
Confidence            9999999999899999863

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.7e-36  Score=268.96  Aligned_cols=298  Identities=33%  Similarity=0.436  Sum_probs=244.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.++|++   ++++ +.+.|++.+++|+||+.++++|++|+....|.++. .+..+|.++|||++|+|+++|+++
T Consensus         1 ~ka~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v   76 (340)
T cd05284           1 MKAARLYEYGKP---LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGV   76 (340)
T ss_pred             CeeeEeccCCCC---ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCC
Confidence            899999998765   6888 88999999999999999999999999998887643 334568899999999999999999


Q ss_pred             CCCCCCCeeEeecCc--------------cc----cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINE--------------KA----LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~--------------~~----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +.+++||+|++....              ++    .-+....|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~  156 (340)
T cd05284          77 DGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYH  156 (340)
T ss_pred             CcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            999999999986421              00    011234689999999999999999999999999999999999999


Q ss_pred             HHH-h-cccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--C
Q 021628          142 GLE-R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--P  212 (310)
Q Consensus       142 al~-~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~  212 (310)
                      ++. . ..+.++++|+|+| ++.+|++++++|+.+ | .+++++++++++.+.++++|.+++++++.. +..    .  .
T Consensus       157 ~l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~  233 (340)
T cd05284         157 AVKKALPYLDPGSTVVVIG-VGGLGHIAVQILRAL-TPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGG  233 (340)
T ss_pred             HHHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHh-CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCC
Confidence            994 3 4688999999999 677999999999997 7 899999999999999999999998887654 211    1  2


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC---------CCceEEEE--ecCHHHHHHHHHHHHcCCeeEEec
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT---------PPASSFVL--TSDGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      .++|+++|++|.   ...++++++++|+++.+|....         .....+..  ......+..+++++.++.+++.  
T Consensus       234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--  311 (340)
T cd05284         234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVE--  311 (340)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcc--
Confidence            479999999884   4788999999999999975431         11222221  1245678899999999988752  


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                       .+.|+++++++|++.+.+++..+|+++.+
T Consensus       312 -~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         312 -ITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             -eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence             46799999999999999998888998764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.5e-36  Score=269.92  Aligned_cols=298  Identities=31%  Similarity=0.404  Sum_probs=225.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCc-ccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT-IPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++..+++.   .+++ +.+.|.+.+++|+||+.++|||.||++++++..+.  ...|. ++|||++|+|+++| .+
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~--~~~~~~i~GHE~~G~V~evG-~~   73 (350)
T COG1063           1 MKAAVVYVGGGD---VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF--VPPGDIILGHEFVGEVVEVG-VV   73 (350)
T ss_pred             CceeEEEecCCc---cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC--CCCCCcccCccceEEEEEec-cc
Confidence            788888887765   2356 66666679999999999999999999999996532  23344 89999999999999 77


Q ss_pred             CCCCCCCeeEeecCc------------------c-----ccCCCCCCCcceeEEEEecCcccc-CCCCCChhhhccccch
Q 021628           80 KKFKVGDEVYGDINE------------------K-----ALDHPKRNGSLAEYTAVEENLLAL-KPKNLSFVEAASLPLA  135 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~-----~~~~~~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~  135 (310)
                      ..+++||||...+.-                  .     ...+...+|+|+||+++|.+.+++ +|++++ .+++++...
T Consensus        74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~ep  152 (350)
T COG1063          74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEP  152 (350)
T ss_pred             cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcCh
Confidence            789999999876420                  0     001112579999999999765554 588874 555566556


Q ss_pred             HHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH-cCCCEEeeCCCCccc---
Q 021628          136 TETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIE---  209 (310)
Q Consensus       136 ~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~---  209 (310)
                      +.+++++. .....+++++|+|+| +|++|++++++++.. |+ +|++++.+++|++.+++ .+.+.+.+...++..   
T Consensus       153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~-Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~  230 (350)
T COG1063         153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLL-GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEI  230 (350)
T ss_pred             hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence            67797774 455556666999999 999999999999996 75 66777889999999988 667766665443211   


Q ss_pred             -cc--CCCccEEEeCCCCh---HHHHhhcccCCEEEEEeCCCCCC-ce----------EEEEe---cCHHHHHHHHHHHH
Q 021628          210 -DL--PEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPP-AS----------SFVLT---SDGSILEKLNPYFE  269 (310)
Q Consensus       210 -~~--~~~~dvvi~~~g~~---~~~~~~l~~~G~~v~~g~~~~~~-~~----------~~~~~---~~~~~~~~~~~~~~  269 (310)
                       ..  ..++|++|||+|+.   ..+++.++++|+++.+|.+.... .+          .+...   ....+++.+++++.
T Consensus       231 ~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~  310 (350)
T COG1063         231 LELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLA  310 (350)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHH
Confidence             11  23799999999953   79999999999999999764331 11          11111   22357999999999


Q ss_pred             cCCeeEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEe
Q 021628          270 SGKVKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHP  308 (310)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~  308 (310)
                      +|++++...+++.+++++++++++.+.+++. ..|+++++
T Consensus       311 ~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         311 SGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             cCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999988777899999999999999987654 45887753

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=3.3e-36  Score=267.11  Aligned_cols=284  Identities=27%  Similarity=0.356  Sum_probs=228.9

Q ss_pred             CEEEEEccc--CCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~--g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      ||+|++.++  |+. ++.++++ +.+.|+|++|||+||+.++++|+.|......     ...+|.++|+|++|+|++   
T Consensus         3 ~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~-----~~~~p~v~G~e~~G~V~~---   73 (329)
T cd08294           3 AKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR-----LNEGDTMIGTQVAKVIES---   73 (329)
T ss_pred             ceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc-----CCCCCcEecceEEEEEec---
Confidence            999999994  442 2678999 8999999999999999999999887542211     124588999999999985   


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecC---ccccCCCCCC-----hhhhccccchHHHHHHHH-Hhccc
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN---LLALKPKNLS-----FVEAASLPLATETAYEGL-ERSAF  148 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al-~~~~~  148 (310)
                      .++++++||+|++.            ++|++|++++..   .++++|++++     ...++.++++++|||+++ +..++
T Consensus        74 ~~~~~~~Gd~V~~~------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~  141 (329)
T cd08294          74 KNSKFPVGTIVVAS------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP  141 (329)
T ss_pred             CCCCCCCCCEEEee------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC
Confidence            44679999999873            579999999999   9999999988     233346788999999998 57889


Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g  223 (310)
                      ++|++|+|+|++|++|.+++|+|+.+ |++++++++++++.+.++++|++++++++++++..     ..+++|++||++|
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~-G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIK-GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            99999999999999999999999996 99999999999999999999999999887655422     2357999999988


Q ss_pred             C--hHHHHhhcccCCEEEEEeCCCC---C-----C---------ceEEEEec-------CHHHHHHHHHHHHcCCeeEEe
Q 021628          224 Q--CDKALKAVKEGGRVVSIIGSVT---P-----P---------ASSFVLTS-------DGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~~---~-----~---------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      .  ...++++++++|+++.+|....   .     .         ..++....       ..+.++++++++.++.+++..
T Consensus       221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  300 (329)
T cd08294         221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE  300 (329)
T ss_pred             HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc
Confidence            4  5789999999999999874211   0     0         01111100       123467888999999998753


Q ss_pred             cCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          278 DPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                        ...|+++++++|++.+.+++..||+++++
T Consensus       301 --~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         301 --HVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             --ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence              35689999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-36  Score=266.82  Aligned_cols=289  Identities=28%  Similarity=0.362  Sum_probs=228.0

Q ss_pred             EEEEEccc----CCCccceEEecc---ccCC-CCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCccccc--ceeEE
Q 021628            2 KAWVYKEY----GNSQSVLKFETN---VEVP-SLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGY--DVAGV   71 (310)
Q Consensus         2 ka~~~~~~----g~~~~~l~~~~~---~~~~-~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~--e~~G~   71 (310)
                      |.|++...    -++ +.++++ +   .+.| ++++|||+||+.++++++.|...+.+...  ...+|.++|+  |++|+
T Consensus        10 ~~~~~~~~~~~~~~~-~~f~~~-~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~--~~~~p~~~G~~~~~~G~   85 (348)
T PLN03154         10 KQVILKNYIDGIPKE-TDMEVK-LGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD--SYLPPFVPGQRIEGFGV   85 (348)
T ss_pred             eEEEEecCCCCCCCc-ccEEEE-eecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC--CCCCCcCCCCeeEeeEE
Confidence            56666322    333 568887 5   3555 35899999999999999998765443221  1235788998  88999


Q ss_pred             EEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCc--c--ccCCCCCChh-hhccccchHHHHHHHH-Hh
Q 021628           72 VEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL--L--ALKPKNLSFV-EAASLPLATETAYEGL-ER  145 (310)
Q Consensus        72 V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~ip~~~~~~-~aa~~~~~~~ta~~al-~~  145 (310)
                      |..+|++++++++||+|++            .|+|++|..++...  +  +++|+++++. +++.+++++.|||+++ ..
T Consensus        86 v~~vg~~v~~~~~Gd~V~~------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~  153 (348)
T PLN03154         86 SKVVDSDDPNFKPGDLISG------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEV  153 (348)
T ss_pred             EEEEecCCCCCCCCCEEEe------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHh
Confidence            9999999999999999987            36899999998753  5  4459999986 6888899999999999 56


Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCC-cccc-----cCCCccEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIED-----LPEKFDVV  218 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~-----~~~~~dvv  218 (310)
                      .++++|++|+|+|++|++|++++|+|+.+ |++|+++++++++++.++ ++|++.+++++++ ++..     ..+++|++
T Consensus       154 ~~~~~g~~VlV~GaaG~vG~~aiqlAk~~-G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v  232 (348)
T PLN03154        154 CSPKKGDSVFVSAASGAVGQLVGQLAKLH-GCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIY  232 (348)
T ss_pred             cCCCCCCEEEEecCccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEE
Confidence            88999999999998899999999999996 999999999999999987 7999999987643 3321     13479999


Q ss_pred             EeCCCC--hHHHHhhcccCCEEEEEeCCCCCC--------c--------eEEEEec-------CHHHHHHHHHHHHcCCe
Q 021628          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTPP--------A--------SSFVLTS-------DGSILEKLNPYFESGKV  273 (310)
Q Consensus       219 i~~~g~--~~~~~~~l~~~G~~v~~g~~~~~~--------~--------~~~~~~~-------~~~~~~~~~~~~~~~~~  273 (310)
                      ||++|.  ...++++++++|+++.+|......        .        ..+....       ..+.++++++++.+|++
T Consensus       233 ~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l  312 (348)
T PLN03154        233 FDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKI  312 (348)
T ss_pred             EECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            999984  578999999999999998643110        0        0111100       12457789999999999


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++.+  ...|+++++++|++.+.+++..||++|++.
T Consensus       313 ~~~~--~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        313 VYIE--DMSEGLESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             cCce--ecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence            8753  467999999999999999999999999875

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-36  Score=269.18  Aligned_cols=300  Identities=21%  Similarity=0.267  Sum_probs=236.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++.    ++++ +.+.|.++++||+||+.++++|++|++.+.|.++.  ..+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~   73 (339)
T PRK10083          1 MKSIVIEKPNS----LAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF--AKYPRVIGHEFFGVIDAVGEGVD   73 (339)
T ss_pred             CeEEEEecCCe----eEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc--CCCCcccccceEEEEEEECCCCc
Confidence            99999998775    4899 89999999999999999999999999998886532  24688999999999999999999


Q ss_pred             CCCCCCeeEeecCccccC------------------CCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKALD------------------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|+..+......                  +....|+|++|+.++...++++|++++++.++ +...+.+++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            999999998532110000                  11235899999999999999999999998876 44567788876


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccccc----CCCccE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~dv  217 (310)
                      ....++++|++|+|+| +|.+|++++++|+.+.|++ ++++++++++.+.++++|++.+++.+..++...    ..++|+
T Consensus       153 ~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~  231 (339)
T PRK10083        153 TGRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTL  231 (339)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCE
Confidence            6788999999999999 8999999999999623886 556677899999999999999988765433221    124579


Q ss_pred             EEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE-EecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV-LTSDGSILEKLNPYFESGKVKAIIDPKGPF  283 (310)
Q Consensus       218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (310)
                      +||++|.   ...++++++++|+++.+|....+.          .+.+. .......++++++++.++.+++...+++.|
T Consensus       232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  311 (339)
T PRK10083        232 IIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTF  311 (339)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeee
Confidence            9999883   588999999999999998543111          11111 112346788999999999988643346889


Q ss_pred             chhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628          284 PFSQTLEAFSHLESSR-ATGKVVIHPI  309 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~-~~~k~vi~~~  309 (310)
                      +++++++|++.+.++. ..+|+++++.
T Consensus       312 ~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        312 DFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             cHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            9999999999987653 5689998764

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.1e-36  Score=266.86  Aligned_cols=303  Identities=32%  Similarity=0.448  Sum_probs=242.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC------------------CCCCCCc
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------------------TDSPLPT   62 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~------------------~~~~~p~   62 (310)
                      ||++++..++.+ +.+++..+.+.|++.+++|+||+.++++|++|++.+.|.++.                  ....+|.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~   79 (350)
T cd08274           1 MRAVLLTGHGGL-DKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR   79 (350)
T ss_pred             CeEEEEeccCCc-cceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence            899999988776 667776234777889999999999999999999988776431                  1345788


Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCeeEeecCcccc----------CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           63 IPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKAL----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        63 ~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                      ++|||++|+|+++|+++..+++||+|++.+.....          .+....|++++|+.++...++++|+++++.+++.+
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l  159 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF  159 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence            99999999999999999999999999885321110          11123589999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---  209 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---  209 (310)
                      ++++.|||+++...++++|++|+|+|++|.+|++++++|+.+ |++++.+++++ +++.++++|++.+.+.......   
T Consensus       160 ~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~  237 (350)
T cd08274         160 PCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRR-GAIVIAVAGAA-KEEAVRALGADTVILRDAPLLADAK  237 (350)
T ss_pred             ccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHHHH
Confidence            999999999997788999999999998899999999999996 99998888765 8888889998766554332211   


Q ss_pred             -ccCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628          210 -DLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       210 -~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~  273 (310)
                       ...+++|++||++|.  ...++++++++|+++.+|.....           .+..+..  ......+.++++++.++.+
T Consensus       238 ~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  317 (350)
T cd08274         238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEI  317 (350)
T ss_pred             hhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCc
Confidence             123579999999884  57899999999999998743211           1111111  1235678999999999998


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++.  +++.|++++++++++.+..+...+|+++++
T Consensus       318 ~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         318 RPV--VAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             ccc--cccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            764  468899999999999999888888988753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=4.4e-35  Score=259.24  Aligned_cols=296  Identities=31%  Similarity=0.426  Sum_probs=244.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++++++.+ ..+++. +.+.|.+.+++|+||+.++++|++|+....|..+.. ...+|.++|||++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v   78 (324)
T cd08244           1 MRAIRLHEFGPP-EVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGV   78 (324)
T ss_pred             CeEEEEcCCCCc-cceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCC
Confidence            999999988876 778887 787788899999999999999999999888764321 23457889999999999999999


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcC
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG  159 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~  159 (310)
                      ..+++||+|++...       ...|+|++|+.++...++++|+++++.+++.+++.++|||..++..+++++++|+|+|+
T Consensus        79 ~~~~~Gd~V~~~~~-------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~  151 (324)
T cd08244          79 DPAWLGRRVVAHTG-------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAA  151 (324)
T ss_pred             CCCCCCCEEEEccC-------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            99999999998641       13589999999999999999999999999999999999965557889999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|.+|++++++|+.+ |++++++++++++.+.++++|.+++++.++.++..      ..+++|+++|++|.  ...++++
T Consensus       152 ~~~~g~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~  230 (324)
T cd08244         152 AGGLGSLLVQLAKAA-GATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALAL  230 (324)
T ss_pred             CchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHH
Confidence            999999999999996 99999999999999999999998888766543211      12479999999884  4789999


Q ss_pred             cccCCEEEEEeCCCCC-----------CceEEEE---e-c----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHH
Q 021628          232 VKEGGRVVSIIGSVTP-----------PASSFVL---T-S----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAF  292 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  292 (310)
                      ++++|+++.+|.....           ....+..   . .    ..+.+.++++++.++.+...  +.+.|+++++++++
T Consensus       231 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~  308 (324)
T cd08244         231 LAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV--VGQTFPLERAAEAH  308 (324)
T ss_pred             hccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc--cceEEeHHHHHHHH
Confidence            9999999999864311           1111111   0 0    13567788999999988753  56789999999999


Q ss_pred             HHHHcCCCCccEEEEe
Q 021628          293 SHLESSRATGKVVIHP  308 (310)
Q Consensus       293 ~~~~~~~~~~k~vi~~  308 (310)
                      +.+.++...+|+++++
T Consensus       309 ~~~~~~~~~~kvv~~~  324 (324)
T cd08244         309 AALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHcCCCCceEEEeC
Confidence            9999988889998864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-35  Score=268.03  Aligned_cols=299  Identities=27%  Similarity=0.349  Sum_probs=238.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.+++++    +++ +.|.|.+ .+++|+||+.++++|++|+..+.|.++.  ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~----~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~p~~~G~e~~G~V~~vG~~v   73 (386)
T cd08283           1 MKALVWHGKGDV----RVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG--MKKGDILGHEFMGVVEEVGPEV   73 (386)
T ss_pred             CeeEEEecCCCc----eEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC--CCCCccccccceEEEEEeCCCC
Confidence            999999976554    888 8999988 5999999999999999999999997743  3568899999999999999999


Q ss_pred             CCCCCCCeeEeecCcc-----------------------------c----cC-----CCCCCCcceeEEEEecC--cccc
Q 021628           80 KKFKVGDEVYGDINEK-----------------------------A----LD-----HPKRNGSLAEYTAVEEN--LLAL  119 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~-----------------------------~----~~-----~~~~~g~~~~~~~~~~~--~~~~  119 (310)
                      .++++||+|++.+...                             +    ..     .....|+|++|++++.+  .+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            9999999998853100                             0    00     00136899999999987  8999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          120 KPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       120 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      +|+++++++++.+++.+++||++++..++.+|++|+|+| +|.+|.+++++|+.. |. +++++++++++.+.+++++..
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~-g~~~vi~~~~~~~~~~~~~~~~~~  231 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWG-CGPVGLFAARSAKLL-GAERVIAIDRVPERLEMARSHLGA  231 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999999999999999778899999999997 799999999999996 87 488888999999999988434


Q ss_pred             EEeeCCCCc-ccc----c--CCCccEEEeCCCC------------------------hHHHHhhcccCCEEEEEeCCCC-
Q 021628          199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------------CDKALKAVKEGGRVVSIIGSVT-  246 (310)
Q Consensus       199 ~~~~~~~~~-~~~----~--~~~~dvvi~~~g~------------------------~~~~~~~l~~~G~~v~~g~~~~-  246 (310)
                      .+++....+ +..    .  .+++|++||++|.                        .+.++++++++|+++.+|.... 
T Consensus       232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~  311 (386)
T cd08283         232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGT  311 (386)
T ss_pred             EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCC
Confidence            566655432 211    1  2379999999852                        4778999999999999986432 


Q ss_pred             CC----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCC-CCccEEEEe
Q 021628          247 PP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSR-ATGKVVIHP  308 (310)
Q Consensus       247 ~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~  308 (310)
                      ..          ...+..  ......+..+++++.++++.+....++.|+++++++|++.+.++. ..+|++|++
T Consensus       312 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         312 VNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             cCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            11          111111  112456888999999999886433467899999999999988876 457988853

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2e-35  Score=263.49  Aligned_cols=296  Identities=27%  Similarity=0.361  Sum_probs=240.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCC-CcEEEEEeEeecCHHHHHHHhCCCCCCCC---CCCcccccceeEEEEEeC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLGAFSATDS---PLPTIPGYDVAGVVEKVG   76 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~~g   76 (310)
                      |||++++.++.+.+.++++ +.|.|++.+ ++|+||+.++++|++|+..+.|..+....   .+|.++|||++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG   79 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence            9999999998753467888 899998887 99999999999999999998886532111   157789999999999999


Q ss_pred             CCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEE
Q 021628           77 SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSIL  155 (310)
Q Consensus        77 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vl  155 (310)
                      +++..+++||+|++...        ..|+|++|+.++...++++|+++++++++.+++.+.|||+++. ...+++|++|+
T Consensus        80 ~~v~~~~~Gd~V~~~~~--------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          80 SGVKSLKPGDWVIPLRP--------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             CCCCCCCCCCEEEecCC--------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence            99999999999998641        2589999999999999999999999999999999999999984 57889999999


Q ss_pred             EEcCCcchHHHHHHHHHhhcCCcEEEEecCh----hhHHHHHHcCCCEEeeCCCC---cccc-----cCCCccEEEeCCC
Q 021628          156 VLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLRSLGADLAIDYTKE---NIED-----LPEKFDVVFDAVG  223 (310)
Q Consensus       156 I~g~~g~~G~~a~~la~~~~g~~vi~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~-----~~~~~dvvi~~~g  223 (310)
                      |+|++|.+|++++++|+.. |.+++++++++    ++.+.++++|++++++.+..   +...     ..+++|++|||+|
T Consensus       152 I~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g  230 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLL-GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG  230 (341)
T ss_pred             EccchhHHHHHHHHHHHHc-CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence            9998899999999999996 99999888765    66888888999998876543   2211     1127999999988


Q ss_pred             C--hHHHHhhcccCCEEEEEeCCCC-----------CCceEEEEec--------CH----HHHHHHHHHHHcCCeeEEec
Q 021628          224 Q--CDKALKAVKEGGRVVSIIGSVT-----------PPASSFVLTS--------DG----SILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~  278 (310)
                      .  ....+++++++|+++.+|....           .....+....        ..    ..+..+++++.++.+.+.. 
T Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-  309 (341)
T cd08290         231 GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP-  309 (341)
T ss_pred             cHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc-
Confidence            4  4678999999999999975321           1112222110        11    2477888999999987642 


Q ss_pred             CCccc---chhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPF---PFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~---~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                       ...+   ++++++++++.+.++...+|+++++
T Consensus       310 -~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         310 -VEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             -ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence             3455   9999999999999888888999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.4e-35  Score=267.14  Aligned_cols=298  Identities=25%  Similarity=0.310  Sum_probs=235.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++++.   ++++ +.|.|++.++||+||+.++++|++|++.+.|.++   ..+|.++|||++|+|+++|+++.
T Consensus         8 ~~a~~~~~~~~~---~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~   80 (373)
T cd08299           8 CKAAVLWEPKKP---FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV---TPFPVILGHEAAGIVESVGEGVT   80 (373)
T ss_pred             eEEEEEecCCCC---cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC---CCCCccccccceEEEEEeCCCCc
Confidence            789999987765   6888 8999999999999999999999999999988752   35688999999999999999999


Q ss_pred             CCCCCCeeEeecCc------------------ccc---------------------CCCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINE------------------KAL---------------------DHPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~---------------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      .+++||+|+..+..                  ...                     ......|+|++|++++...++++|
T Consensus        81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP  160 (373)
T cd08299          81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID  160 (373)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence            99999999875210                  000                     000125899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++++.+.+++.+||+++ ..+++++|++|+|+| +|++|++++++|+.+ |+ +|+++++++++++.++++|+++
T Consensus       161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~-G~~~Vi~~~~~~~~~~~a~~lGa~~  238 (373)
T cd08299         161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAA-GASRIIAVDINKDKFAKAKELGATE  238 (373)
T ss_pred             CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence            9999999999999999999987 578899999999997 799999999999996 88 7999999999999999999988


Q ss_pred             EeeCCCCc--cc-----ccCCCccEEEeCCCC---hHHHHhh-cccCCEEEEEeCCCCCCc-----------eEEEEe--
Q 021628          200 AIDYTKEN--IE-----DLPEKFDVVFDAVGQ---CDKALKA-VKEGGRVVSIIGSVTPPA-----------SSFVLT--  255 (310)
Q Consensus       200 ~~~~~~~~--~~-----~~~~~~dvvi~~~g~---~~~~~~~-l~~~G~~v~~g~~~~~~~-----------~~~~~~--  255 (310)
                      +++..+.+  ..     ...+++|+++||+|.   ...++.. ++++|+++.+|.......           ..+...  
T Consensus       239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~  318 (373)
T cd08299         239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVF  318 (373)
T ss_pred             EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEe
Confidence            88765322  11     112479999999884   3555554 467999999986432111           111110  


Q ss_pred             ---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          256 ---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       256 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                         .....+.++++.+.++.+++...+++.|+++++++|++.+.+++.. |.++++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~-k~~~~~  373 (373)
T cd08299         319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI-RTVLTF  373 (373)
T ss_pred             cCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcc-eEEEeC
Confidence               1124566777878777765543467899999999999998877654 777754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=3.3e-35  Score=260.34  Aligned_cols=281  Identities=26%  Similarity=0.372  Sum_probs=225.0

Q ss_pred             EEEEEcc----cCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            2 KAWVYKE----YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         2 ka~~~~~----~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |.|++.+    ...+ +.++++ +.|.|++++|||+|||.++++|+.+.   .|.++  ....|.++|.|++|+|++.|+
T Consensus         2 ~~~~~~~~~~~~~~~-~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~--~~~~~~i~G~~~~g~v~~~~~   74 (325)
T TIGR02825         2 KTWTLKKHFVGYPTD-SDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKR--LKEGDTMMGQQVARVVESKNV   74 (325)
T ss_pred             cEEEEecCCCCCCCC-CceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCc--CCCCCcEecceEEEEEEeCCC
Confidence            4455543    2344 678888 89999999999999999999999654   34332  123477999999999999764


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccC----CCCCChhhh-ccccchHHHHHHHH-HhcccCCC
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEA-ASLPLATETAYEGL-ERSAFSAG  151 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al-~~~~~~~g  151 (310)
                         ++++||+|++.            ++|++|+.++.+.+.++    |++++++++ +++++++.|||+++ +.+++++|
T Consensus        75 ---~~~~GdrV~~~------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g  139 (325)
T TIGR02825        75 ---ALPKGTIVLAS------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGG  139 (325)
T ss_pred             ---CCCCCCEEEEe------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCC
Confidence               59999999984            46999999998887777    899999987 67899999999998 67899999


Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC-cccc-----cCCCccEEEeCCCC-
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ-  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g~-  224 (310)
                      ++|+|+|++|++|++++|+|+.. |++|+++++++++.+.++++|++.++++++. .+..     ..+++|++||++|. 
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~-G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~  218 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE  218 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH
Confidence            99999999999999999999996 9999999999999999999999999987653 3221     13479999999984 


Q ss_pred             -hHHHHhhcccCCEEEEEeCCC-------CCC----------ceEEEEec--------CHHHHHHHHHHHHcCCeeEEec
Q 021628          225 -CDKALKAVKEGGRVVSIIGSV-------TPP----------ASSFVLTS--------DGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~-------~~~----------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                       ...++++++++|+++.+|...       .+.          ...+....        ..+.++++++++.++++++.. 
T Consensus       219 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-  297 (325)
T TIGR02825       219 FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE-  297 (325)
T ss_pred             HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce-
Confidence             588999999999999997532       010          11111100        134578899999999998753 


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                       ...|+++++++|++.+.+++..||++++
T Consensus       298 -~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       298 -YVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             -eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence             3568999999999999999988999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.4e-35  Score=261.25  Aligned_cols=300  Identities=28%  Similarity=0.403  Sum_probs=244.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++..++ . ..++++ +.+.|.+.++||+||+.++++|++|...+.+.++. +...|..+|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~-~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~vG~~~~   76 (341)
T cd08297           1 MKAAVVEEFG-E-KPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV-KPKLPLIGGHEGAGVVVAVGPGVS   76 (341)
T ss_pred             CceEEeeccC-C-CCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc-CCCCCccCCcccceEEEEeCCCCC
Confidence            9999999887 2 446898 89999999999999999999999999998887642 234567899999999999999999


Q ss_pred             CCCCCCeeEeecC---------------ccc----cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDIN---------------EKA----LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~---------------~~~----~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      .+++||+|+..+.               +.+    ..+....|++++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~  156 (341)
T cd08297          77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK  156 (341)
T ss_pred             CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence            9999999987521               000    001113689999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~  215 (310)
                      ++...+++++++|+|+|+.+.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++..+.+...      ..+++
T Consensus       157 ~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v  235 (341)
T cd08297         157 ALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAM-GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA  235 (341)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence            996668999999999998888999999999996 99999999999999999999998888776543211      13579


Q ss_pred             cEEEeCCC---ChHHHHhhcccCCEEEEEeCCCCC-----------CceEEEEec--CHHHHHHHHHHHHcCCeeEEecC
Q 021628          216 DVVFDAVG---QCDKALKAVKEGGRVVSIIGSVTP-----------PASSFVLTS--DGSILEKLNPYFESGKVKAIIDP  279 (310)
Q Consensus       216 dvvi~~~g---~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  279 (310)
                      |+++|+.+   ....++++++++|+++.+|.....           ....+....  ..++++++++++.++.+.+.   
T Consensus       236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---  312 (341)
T cd08297         236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPH---  312 (341)
T ss_pred             CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcce---
Confidence            99999765   247889999999999999854311           111111111  25788999999999998753   


Q ss_pred             CcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          280 KGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .+.|++++++++++.+..+...+|++++|
T Consensus       313 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         313 IQVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             eEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            25699999999999999998889999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.1e-35  Score=261.65  Aligned_cols=295  Identities=32%  Similarity=0.479  Sum_probs=238.5

Q ss_pred             EEEEEccc---CCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            2 KAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         2 ka~~~~~~---g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      ||+++..+   |++ +.+++. +.|.|+++++||+||+.++++|++|.....+..+  ...+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~vG~~   76 (336)
T TIGR02817         1 KAVGYKKPLPITDP-DALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP--EAGQPKILGWDAAGVVVAVGDE   76 (336)
T ss_pred             CceeeccccCCCCc-ccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC--CCCCCcccceeeEEEEEEeCCC
Confidence            68899987   776 788988 8999999999999999999999999998877543  2346788999999999999999


Q ss_pred             CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCC-----CC
Q 021628           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----GK  152 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g~  152 (310)
                      ++.+++||+|++...      ....|+|++|+.++.+.++++|+++++++++.++++++|||+++ ...++++     |+
T Consensus        77 v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~  150 (336)
T TIGR02817        77 VTLFKPGDEVWYAGD------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKR  150 (336)
T ss_pred             CCCCCCCCEEEEcCC------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            999999999988531      11258999999999999999999999999999999999999998 5677776     99


Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCC---C
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG---Q  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g---~  224 (310)
                      +|+|+|++|.+|++++++|+.++|++|+++++++++.+.++++|++++++++. ++..     ..+++|+++|+.+   .
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~  229 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQH  229 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHH
Confidence            99999999999999999999833899999999999999999999999887543 2211     1247999999874   3


Q ss_pred             hHHHHhhcccCCEEEEEeCCCC------C-CceEEE---Ee--c---C------HHHHHHHHHHHHcCCeeEEec-CCcc
Q 021628          225 CDKALKAVKEGGRVVSIIGSVT------P-PASSFV---LT--S---D------GSILEKLNPYFESGKVKAIID-PKGP  282 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~------~-~~~~~~---~~--~---~------~~~~~~~~~~~~~~~~~~~~~-~~~~  282 (310)
                      ....+++++++|+++.++....      . ....+.   ..  .   .      ...++++++++.++.+++.+. ....
T Consensus       230 ~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~  309 (336)
T TIGR02817       230 FKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGT  309 (336)
T ss_pred             HHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCC
Confidence            5889999999999998854210      0 112111   10  0   0      145788999999999876421 1123


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEE
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ++++++++|++.+.+++..+|++++
T Consensus       310 ~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       310 INAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CCHHHHHHHHHHHHcCCccceEEEe
Confidence            4579999999999999888898875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-35  Score=263.22  Aligned_cols=298  Identities=24%  Similarity=0.319  Sum_probs=237.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC---------CCCCCCCcccccceeEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS---------ATDSPLPTIPGYDVAGV   71 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~---------~~~~~~p~~~G~e~~G~   71 (310)
                      |||++++++ .    ++++ +.+.|+++++||+||+.++++|++|+....|...         .....+|.++|+|++|+
T Consensus         1 m~a~~~~~~-~----~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   74 (341)
T cd08262           1 MRAAVFRDG-P----LVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE   74 (341)
T ss_pred             CceEEEeCC-c----eEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEE
Confidence            999999876 3    6888 8999999999999999999999999998887321         01223578899999999


Q ss_pred             EEEeCCCCCC-CCCCCeeEeecCccccCCC--------CCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           72 VEKVGSQVKK-FKVGDEVYGDINEKALDHP--------KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        72 V~~~g~~~~~-~~~Gd~V~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      |+++|+++++ +++||+|++.+...+..+.        ...|+|++|+.++.+.++++|+++++++++ +++.+.+||++
T Consensus        75 V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~  153 (341)
T cd08262          75 VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA  153 (341)
T ss_pred             EEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence            9999999987 9999999987432222111        136899999999999999999999998876 66788899998


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcE-EEEecChhhHHHHHHcCCCEEeeCCCCcc--------c-ccC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAIDYTKENI--------E-DLP  212 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~v-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------~-~~~  212 (310)
                      +..+++++|++|+|+| +|.+|.+++++|+.+ |+++ ++++.++++.+.++++|++++++++..+.        . ...
T Consensus       154 ~~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~  231 (341)
T cd08262         154 VRRARLTPGEVALVIG-CGPIGLAVIAALKAR-GVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGG  231 (341)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCC
Confidence            8788999999999998 699999999999996 8874 55566889999999999988888654421        0 113


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEE--EEecCHHHHHHHHHHHHcCCeeEEe
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSF--VLTSDGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      +++|++||++|.   ...++++++++|+++.+|.....          ....+  ......+.+.++++++.++.+.+..
T Consensus       232 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  311 (341)
T cd08262         232 PKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAP  311 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence            469999999874   47889999999999999854211          11122  1223456788999999999998643


Q ss_pred             cCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          278 DPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      .+++.|++++++++++.+.+++..+|++++
T Consensus       312 ~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         312 MVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             heEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            346789999999999999999888898874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6.3e-35  Score=258.95  Aligned_cols=291  Identities=28%  Similarity=0.382  Sum_probs=241.4

Q ss_pred             CEEEEEcccCC--CccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGN--SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~--~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      ||++++.+++.  . +.++++ +.+.|.+.++||+||+.++++|++|+....|.++.. ..+|.++|||++|+|+.+|++
T Consensus         2 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~   78 (329)
T cd08250           2 FRKLVVHRLSPNFR-EATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEG   78 (329)
T ss_pred             ceEEEeccCCCCcc-cCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCC
Confidence            99999999888  6 778899 899999999999999999999999999888865322 357889999999999999999


Q ss_pred             CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEE
Q 021628           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL  157 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~  157 (310)
                      ++.+++||+|++..          .|+|++|+.++.+.++++|++.  .+++.+++++.+||+++ +..++++|++|+|+
T Consensus        79 v~~~~~Gd~V~~~~----------~g~~~s~~~v~~~~~~~ip~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~  146 (329)
T cd08250          79 VTDFKVGDAVATMS----------FGAFAEYQVVPARHAVPVPELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVT  146 (329)
T ss_pred             CCCCCCCCEEEEec----------CcceeEEEEechHHeEECCCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            99999999999864          4899999999999999999973  46778889999999998 46789999999999


Q ss_pred             cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCccEEEeCCCC--hHHHHh
Q 021628          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       158 g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~dvvi~~~g~--~~~~~~  230 (310)
                      |++|.+|++++++++.. |.+++++++++++.+.++++|.+.+++.+..+..     ...+++|++||+.|.  ...+++
T Consensus       147 ga~g~ig~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~  225 (329)
T cd08250         147 AAAGGTGQFAVQLAKLA-GCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVD  225 (329)
T ss_pred             eCccHHHHHHHHHHHHc-CCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHH
Confidence            99999999999999996 9999999999999999999998888876543321     113579999999874  578899


Q ss_pred             hcccCCEEEEEeCCCCC--------------------CceEEEEec-------CHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628          231 AVKEGGRVVSIIGSVTP--------------------PASSFVLTS-------DGSILEKLNPYFESGKVKAIIDPKGPF  283 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~--------------------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (310)
                      +++++|+++.+|.....                    ....+....       ..+.+.++++++.++.+.+.....+.+
T Consensus       226 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  305 (329)
T cd08250         226 NLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFR  305 (329)
T ss_pred             HhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCcccc
Confidence            99999999999754210                    111111111       134577889999999998754456679


Q ss_pred             chhhHHHHHHHHHcCCCCccEEEE
Q 021628          284 PFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++++|++.+.++...+|++++
T Consensus       306 ~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         306 GLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             CHHHHHHHHHHHHcCCCCceEEeC
Confidence            999999999999988887888763

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-35  Score=264.09  Aligned_cols=299  Identities=24%  Similarity=0.310  Sum_probs=239.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.+++++    +++ +.|.|++ .++||+||+.++++|++|+..+.|.++.  ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~----~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~~G~~v   73 (345)
T cd08286           1 MKALVYHGPGKI----SWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT--VTPGRILGHEGVGVVEEVGSAV   73 (345)
T ss_pred             CceEEEecCCce----eEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC--CCCCceecccceEEEEEeccCc
Confidence            999999987765    888 8999886 8999999999999999999999887642  3457899999999999999999


Q ss_pred             CCCCCCCeeEeecCcc-------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHHH
Q 021628           80 KKFKVGDEVYGDINEK-------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATET  138 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t  138 (310)
                      ..+++||+|++.+...                   +..+....|+|++|+.++.+  .++++|++++..+++.+++.+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence            9999999998854210                   00011224899999999987  89999999999999999999999


Q ss_pred             HHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628          139 AYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------  210 (310)
Q Consensus       139 a~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------  210 (310)
                      ||+++ ...++.+|++|+|.| +|.+|.+++++|+.+ | .+++++++++++.+.++++|++.+++..+.++..      
T Consensus       154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (345)
T cd08286         154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLY-SPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELT  231 (345)
T ss_pred             HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHh
Confidence            99876 577899999999988 699999999999996 8 7888887888899998999998888876544221      


Q ss_pred             cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe-cCHHHHHHHHHHHHcCCeeEE
Q 021628          211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT-SDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ..+++|++|||+|.   ...++++++++|+++.+|......          ...+... .....+..++++++++.+++.
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (345)
T cd08286         232 DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPS  311 (345)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChH
Confidence            12479999999874   477789999999999998543111          1122211 123567889999999998764


Q ss_pred             ecCCcccchhhHHHHHHHHHcCC--CCccEEEEe
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSR--ATGKVVIHP  308 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~--~~~k~vi~~  308 (310)
                      ...++.|++++++++++.+.+..  ...|++|+|
T Consensus       312 ~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         312 KLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            33468899999999999998764  234888865

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-35  Score=264.81  Aligned_cols=298  Identities=31%  Similarity=0.433  Sum_probs=243.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||||++..++..   ++++ +.|.|.++++||+||+.++++|++|+....+.++   ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~---~~~p~~~g~e~~G~v~~vG~~~~   73 (367)
T cd08263           1 MKAAVLKGPNPP---LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP---FPPPFVLGHEISGEVVEVGPNVE   73 (367)
T ss_pred             CeeEEEecCCCC---cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC---CCCCcccccccceEEEEeCCCCC
Confidence            999999998755   6888 8999999999999999999999999998888663   35678999999999999999998


Q ss_pred             C---CCCCCeeEeecCcc--------------ccCC--------------------------CCCCCcceeEEEEecCcc
Q 021628           81 K---FKVGDEVYGDINEK--------------ALDH--------------------------PKRNGSLAEYTAVEENLL  117 (310)
Q Consensus        81 ~---~~~Gd~V~~~~~~~--------------~~~~--------------------------~~~~g~~~~~~~~~~~~~  117 (310)
                      +   +++||+|++.+...              ....                          ....|++++|+.++...+
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  153 (367)
T cd08263          74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL  153 (367)
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence            8   99999998842100              0000                          013589999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHc
Q 021628          118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSL  195 (310)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~  195 (310)
                      +++|+++++.+++.++++++|||+++ ....+.++++|+|+| +|.+|++++++|+.+ |.+ +++++.++++.+.++++
T Consensus       154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~-G~~~vi~~~~s~~~~~~~~~~  231 (367)
T cd08263         154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAF-GASPIIAVDVRDEKLAKAKEL  231 (367)
T ss_pred             EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh
Confidence            99999999999999999999999998 467789999999996 899999999999996 988 78888899999999999


Q ss_pred             CCCEEeeCCCCcccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEEE
Q 021628          196 GADLAIDYTKENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFVL  254 (310)
Q Consensus       196 g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~~  254 (310)
                      |++.+++.+..++..      ...++|++||+++.   ...++++++++|+++.++.....            .+..+..
T Consensus       232 g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  311 (367)
T cd08263         232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG  311 (367)
T ss_pred             CCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence            999998876544321      13579999999874   47889999999999999754311            1111111


Q ss_pred             e---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          255 T---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       255 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      .   ...+.++.+++++.++.+++....++.|+++++.++++.+.++...||+|++
T Consensus       312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            1   1136788999999999988653356789999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-35  Score=265.35  Aligned_cols=298  Identities=22%  Similarity=0.290  Sum_probs=234.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-------CCCCCCcccccceeEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------TDSPLPTIPGYDVAGVVE   73 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~   73 (310)
                      |||++++++++.    +++ +.+.|++.+++|+||+.++++|++|+..+.|....       ....+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~~----~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~   75 (350)
T cd08256           1 MRAVVCHGPQDY----RLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV   75 (350)
T ss_pred             CeeEEEecCCce----EEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEE
Confidence            999999987765    899 89999999999999999999999999988775310       001457789999999999


Q ss_pred             EeCCCCC--CCCCCCeeEeecCcccc------------------CCC--CCCCcceeEEEEecC-ccccCCCCCChhhhc
Q 021628           74 KVGSQVK--KFKVGDEVYGDINEKAL------------------DHP--KRNGSLAEYTAVEEN-LLALKPKNLSFVEAA  130 (310)
Q Consensus        74 ~~g~~~~--~~~~Gd~V~~~~~~~~~------------------~~~--~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa  130 (310)
                      ++|++++  .+++||+|++.+.....                  .+.  ...|+|++|+.++.+ .++++|+++++++++
T Consensus        76 ~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa  155 (350)
T cd08256          76 ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI  155 (350)
T ss_pred             EeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence            9999998  89999999873211000                  001  136899999999987 678999999999999


Q ss_pred             cccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      .+ ..+.++|++++.+++++|++|+|.| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++.+++.+..++.
T Consensus       156 ~~-~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  232 (350)
T cd08256         156 LI-EPLACALHAVDRANIKFDDVVVLAG-AGPLGLGMIGAARLK-NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVV  232 (350)
T ss_pred             hh-hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHH
Confidence            88 7889999998778899999999955 899999999999997 876 5566778889988899999888876544321


Q ss_pred             c------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceE-----------EEE-ecCHHHHHHHHHHH
Q 021628          210 D------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASS-----------FVL-TSDGSILEKLNPYF  268 (310)
Q Consensus       210 ~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~  268 (310)
                      .      ...++|++||++|.   ...++++++++|+++.+|.......+.           +.. ......+.++++++
T Consensus       233 ~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (350)
T cd08256         233 EKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLI  312 (350)
T ss_pred             HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHH
Confidence            1      12479999999873   478899999999999997543211111           000 11234688899999


Q ss_pred             HcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          269 ESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      +++.+++...+++.|+++++++|++.+.++...+|+++
T Consensus       313 ~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         313 ASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            99999864224688999999999999998887778764

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-34  Score=254.20  Aligned_cols=284  Identities=32%  Similarity=0.393  Sum_probs=235.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++++.+ + ..++++ +.+.|.+.++||+||+.++++|++|.+.....      ..|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~   71 (305)
T cd08270           1 MRALVVDPDA-P-LRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGS   71 (305)
T ss_pred             CeEEEEccCC-C-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCC
Confidence            8999999866 5 668888 88999999999999999999999999876521      2356899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~  160 (310)
                      .+++||+|++...         .|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++......+|++|+|+|+.
T Consensus        72 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~  142 (305)
T cd08270          72 GPAVGARVVGLGA---------MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGAS  142 (305)
T ss_pred             CCCCCCEEEEecC---------CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence            9999999998642         5899999999999999999999999999999999999999854444469999999988


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hHHHHhhcccCCEE
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV  238 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~  238 (310)
                      |.+|.+++++++.. |++++.+++++++.+.++++|.+..+..... .  ..+++|+++|++|+  ...++++++++|++
T Consensus       143 ~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         143 GGVGRFAVQLAALA-GAHVVAVVGSPARAEGLRELGAAEVVVGGSE-L--SGAPVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             cHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecccc-c--cCCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            99999999999996 9999999999999999999998655433221 1  12479999999884  57899999999999


Q ss_pred             EEEeCCCCC----------C---ceEEEE---e---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCC
Q 021628          239 VSIIGSVTP----------P---ASSFVL---T---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSR  299 (310)
Q Consensus       239 v~~g~~~~~----------~---~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  299 (310)
                      +.+|.....          .   ...+..   .   .....+..+++++.++++++.  +.+.+++++++++++.+.++.
T Consensus       219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~  296 (305)
T cd08270         219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARR  296 (305)
T ss_pred             EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCC
Confidence            999854210          0   111111   1   113567889999999999864  457899999999999999988


Q ss_pred             CCccEEEEe
Q 021628          300 ATGKVVIHP  308 (310)
Q Consensus       300 ~~~k~vi~~  308 (310)
                      ..+|+++.+
T Consensus       297 ~~gkvvi~~  305 (305)
T cd08270         297 FRGKAVLDV  305 (305)
T ss_pred             CCceEEEeC
Confidence            889999865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.2e-35  Score=261.73  Aligned_cols=300  Identities=26%  Similarity=0.359  Sum_probs=241.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC----------CCCCCCcccccceeE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA----------TDSPLPTIPGYDVAG   70 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~----------~~~~~p~~~G~e~~G   70 (310)
                      |||+++..++.+   ++++ +.|.|++.++||+||+.++++|++|++.+.|.++.          ....+|.++|||++|
T Consensus         1 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G   76 (350)
T cd08240           1 MKAAAVVEPGKP---LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG   76 (350)
T ss_pred             CeeEEeccCCCC---ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeE
Confidence            999999988876   7888 89999999999999999999999999998886531          022456789999999


Q ss_pred             EEEEeCCCCCCCCCCCeeEeecCcccc------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           71 VVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        71 ~V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                      +|+++|++++++++||+|++.+.-...                  .+....|++++|+.++...++++|+++++.+++.+
T Consensus        77 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l  156 (350)
T cd08240          77 EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATL  156 (350)
T ss_pred             EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehh
Confidence            999999999999999999886321000                  00113689999999999999999999999999999


Q ss_pred             cchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccc-
Q 021628          133 PLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIE-  209 (310)
Q Consensus       133 ~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-  209 (310)
                      ++.+++||+++. ....+++++|+|+| +|.+|++++++|+.+ |+ +++++..++++.+.++++|.+.+++.++..+. 
T Consensus       157 ~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  234 (350)
T cd08240         157 ACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKAL-GPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAK  234 (350)
T ss_pred             hchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHH
Confidence            999999999995 45566899999997 899999999999996 98 67888889999999999999888876543321 


Q ss_pred             ----ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHc
Q 021628          210 ----DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFES  270 (310)
Q Consensus       210 ----~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~  270 (310)
                          ...+++|++||+.|.   ...++++|+++|+++.+|.....          ....+..  ....+++..+++++++
T Consensus       235 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~  314 (350)
T cd08240         235 RIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA  314 (350)
T ss_pred             HHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence                112379999999873   58899999999999998754321          1111111  1234678899999999


Q ss_pred             CCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          271 GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +.+++.  ....|++++++++++.+..++..+|+++++
T Consensus       315 ~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         315 GKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             CCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            998764  346899999999999999888889988753

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=8.1e-35  Score=264.30  Aligned_cols=302  Identities=29%  Similarity=0.423  Sum_probs=237.0

Q ss_pred             CEEEEEc--ccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC--------CCCCCCcccccceeE
Q 021628            1 MKAWVYK--EYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA--------TDSPLPTIPGYDVAG   70 (310)
Q Consensus         1 mka~~~~--~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~p~~~G~e~~G   70 (310)
                      |||+++.  .+|.+...++++ +.|.|+++++||+||+.++++|++|++...+....        .....+.++|||++|
T Consensus        13 ~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G   91 (393)
T cd08246          13 MYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASG   91 (393)
T ss_pred             hhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEE
Confidence            8898885  345442357888 89999999999999999999999999887764100        001123578999999


Q ss_pred             EEEEeCCCCCCCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhcc
Q 021628           71 VVEKVGSQVKKFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS  131 (310)
Q Consensus        71 ~V~~~g~~~~~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  131 (310)
                      +|+++|++++.+++||+|++.+.....                   ......|+|++|++++...++++|+++++++++.
T Consensus        92 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~  171 (393)
T cd08246          92 IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAA  171 (393)
T ss_pred             EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhh
Confidence            999999999999999999886420000                   0001359999999999999999999999999999


Q ss_pred             ccchHHHHHHHHH-h--cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc-
Q 021628          132 LPLATETAYEGLE-R--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-  207 (310)
Q Consensus       132 ~~~~~~ta~~al~-~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-  207 (310)
                      +++.+.|||+++. .  +++++|++|+|+|++|.+|++++++|+.+ |++++++++++++++.++++|++++++..+.+ 
T Consensus       172 l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~-G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~  250 (393)
T cd08246         172 YMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAA-GANPVAVVSSEEKAEYCRALGAEGVINRRDFDH  250 (393)
T ss_pred             hcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCCEEEccccccc
Confidence            9999999999984 3  68899999999998899999999999996 99999999999999999999998888753321 


Q ss_pred             ---------------------cc----cc--CC-CccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC-CCceE-----
Q 021628          208 ---------------------IE----DL--PE-KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-PPASS-----  251 (310)
Q Consensus       208 ---------------------~~----~~--~~-~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~-~~~~~-----  251 (310)
                                           +.    ..  .. ++|++||++|.  ...++++++++|+++.+|.... ...+.     
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~  330 (393)
T cd08246         251 WGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLW  330 (393)
T ss_pred             ccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHh
Confidence                                 00    01  12 79999999884  5789999999999999975431 11111     


Q ss_pred             -----EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcC-CCCccEEE
Q 021628          252 -----FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESS-RATGKVVI  306 (310)
Q Consensus       252 -----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~k~vi  306 (310)
                           ...  ....+.+.++++++.++.+.+.  .++.|++++++++++.+.++ +..||+++
T Consensus       331 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         331 MRQKRIQGSHFANDREAAEANRLVMKGRIDPC--LSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             hheeEEEecccCcHHHHHHHHHHHHcCCceee--eeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence                 000  0123478899999999998764  46889999999999999988 67788775

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=9.9e-35  Score=258.66  Aligned_cols=297  Identities=26%  Similarity=0.343  Sum_probs=238.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++++.   .+++ +.|.|++.++||+||+.++++|++|++.+.|.++   ...|.++|||++|+|+++|+++.
T Consensus         1 mka~~~~~~~~~---~~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~~G~~v~   73 (338)
T PRK09422          1 MKAAVVNKDHTG---DVVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG---DKTGRILGHEGIGIVKEVGPGVT   73 (338)
T ss_pred             CeEEEecCCCCC---ceEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC---CCCCccCCcccceEEEEECCCCc
Confidence            999999998876   2378 8999999999999999999999999999888653   23467899999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      .+++||+|++.+.-                   ....+....|++++|+.++...++++|+++++.+++.+++.+.|||+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~  153 (338)
T PRK09422         74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK  153 (338)
T ss_pred             cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence            99999999862110                   00011223699999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Cccc----ccCCCcc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE----DLPEKFD  216 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~----~~~~~~d  216 (310)
                      ++..+++++|++|+|+| +|++|++++++|+.+.|++++++++++++++.++++|++.+++.+. .+..    ....++|
T Consensus       154 ~~~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d  232 (338)
T PRK09422        154 AIKVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAH  232 (338)
T ss_pred             HHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCc
Confidence            99888899999999999 7999999999999733899999999999999999999988887643 2211    1223688


Q ss_pred             EEEeC-CC--ChHHHHhhcccCCEEEEEeCCCCC----------CceEEEEec--CHHHHHHHHHHHHcCCeeEEecCCc
Q 021628          217 VVFDA-VG--QCDKALKAVKEGGRVVSIIGSVTP----------PASSFVLTS--DGSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       217 vvi~~-~g--~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                      +++.+ .+  ....++++++++|+++.+|.....          ....+....  ..++++.+++++.++.+.+.   .+
T Consensus       233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---v~  309 (338)
T PRK09422        233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPK---VQ  309 (338)
T ss_pred             EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCcc---EE
Confidence            55544 43  258899999999999999854211          111121111  35778899999999988654   24


Q ss_pred             ccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          282 PFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       282 ~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .+++++++++++.+.++...+|+++.+
T Consensus       310 ~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        310 LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            589999999999999998889998854

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1e-34  Score=263.87  Aligned_cols=305  Identities=30%  Similarity=0.402  Sum_probs=241.7

Q ss_pred             CEEEEEcc--cCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC--------CCCCCC-ccccccee
Q 021628            1 MKAWVYKE--YGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA--------TDSPLP-TIPGYDVA   69 (310)
Q Consensus         1 mka~~~~~--~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~p-~~~G~e~~   69 (310)
                      |||+++..  ++++.+.+++. +.|.|.+.++||+||+.++++|++|++...+....        .....| .++|||++
T Consensus         8 ~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~   86 (398)
T TIGR01751         8 MYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS   86 (398)
T ss_pred             hhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence            89999965  77664568998 89999999999999999999999998876553210        000123 37999999


Q ss_pred             EEEEEeCCCCCCCCCCCeeEeecCccc-----------cC--------CCCCCCcceeEEEEecCccccCCCCCChhhhc
Q 021628           70 GVVEKVGSQVKKFKVGDEVYGDINEKA-----------LD--------HPKRNGSLAEYTAVEENLLALKPKNLSFVEAA  130 (310)
Q Consensus        70 G~V~~~g~~~~~~~~Gd~V~~~~~~~~-----------~~--------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa  130 (310)
                      |+|+++|+++..+++||+|++......           ..        .....|+|++|+.++...++++|+++++++++
T Consensus        87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa  166 (398)
T TIGR01751        87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAA  166 (398)
T ss_pred             EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHh
Confidence            999999999999999999988642000           00        01135899999999999999999999999999


Q ss_pred             cccchHHHHHHHHH---hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628          131 SLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (310)
Q Consensus       131 ~~~~~~~ta~~al~---~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (310)
                      .+.+.+.+||+++.   ..++++|++|+|+|++|.+|++++++|+.+ |++++++++++++.+.++++|++.+++.++++
T Consensus       167 ~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~-G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~  245 (398)
T TIGR01751       167 CPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAG-GGNPVAVVSSPEKAEYCRELGAEAVIDRNDFG  245 (398)
T ss_pred             hccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCCEEecCCCcc
Confidence            99999999999984   477899999999998899999999999996 99999888999999999999999988865421


Q ss_pred             c----------------------c-----c-cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-CceE-----
Q 021628          208 I----------------------E-----D-LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-PASS-----  251 (310)
Q Consensus       208 ~----------------------~-----~-~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~~~~-----  251 (310)
                      .                      .     . ..+++|++|||+|.  ...++++++++|+++.+|..... ..++     
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  325 (398)
T TIGR01751       246 HWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLW  325 (398)
T ss_pred             hhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHh
Confidence            0                      0     0 02479999999984  57889999999999999864311 1100     


Q ss_pred             -----EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          252 -----FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       252 -----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                           ...  ......++++++++.++.+.+.  +++.+++++++++++.+.++...+|++++++
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       326 MRQKRIQGSHFANLREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             hcccEEEccccCcHHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence                 000  0112347889999999998854  4688999999999999999998899998765

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4.6e-35  Score=263.31  Aligned_cols=296  Identities=26%  Similarity=0.358  Sum_probs=237.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.   ++++ +.+.|++.++||+||+.++++|++|++...|.++   ..+|.++|||++|+|+++|+++.
T Consensus         3 ~~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~---~~~p~v~G~e~~G~V~~vG~~v~   75 (365)
T cd08278           3 TTAAVVREPGGP---FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP---TPLPAVLGHEGAGVVEAVGSAVT   75 (365)
T ss_pred             cEEeeeccCCCc---ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC---CCCCcccccceeEEEEEeCCCcc
Confidence            899999997765   6778 8999999999999999999999999999988653   34688999999999999999999


Q ss_pred             CCCCCCeeEeecCccc--------------------cC--------------------CCCCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINEKA--------------------LD--------------------HPKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~--------------------~~--------------------~~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      .+++||+|++......                    ..                    .....|+|++|+.++...++++
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i  155 (365)
T cd08278          76 GLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV  155 (365)
T ss_pred             cCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence            9999999986321000                    00                    0112589999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~  198 (310)
                      |+++++.+++.+++++.||+.++ ....++++++|+|+| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++
T Consensus       156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~-G~~~v~~~~~~~~k~~~~~~~g~~  233 (365)
T cd08278         156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIA-GCTTIIAVDIVDSRLELAKELGAT  233 (365)
T ss_pred             CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHcCCc
Confidence            99999999999999999999988 578899999999997 799999999999996 985 77778899999999999999


Q ss_pred             EEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC------------CCceEEEEe---
Q 021628          199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT------------PPASSFVLT---  255 (310)
Q Consensus       199 ~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~------------~~~~~~~~~---  255 (310)
                      .+++.++.++.+     ...++|+++||+|.   ...++++++++|+++.+|....            ..+..+...   
T Consensus       234 ~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (365)
T cd08278         234 HVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG  313 (365)
T ss_pred             EEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence            888876544321     13579999999973   4889999999999999986421            111122111   


Q ss_pred             --cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          256 --SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                        ...+.+.++++++.++.+.+. .+...|++++++++++.+.++... |++++
T Consensus       314 ~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         314 DSVPQEFIPRLIELYRQGKFPFD-KLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             CcChHHHHHHHHHHHHcCCCChH-HheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence              113567889999999988542 223579999999999999887764 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-34  Score=258.38  Aligned_cols=295  Identities=26%  Similarity=0.369  Sum_probs=241.9

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |+|+.+..+..   ++++ +.+.|++.++||+||+.++++|++|++.+.|.+.  ...+|.++|||++|+|+++|+++.+
T Consensus         1 ~~~~~~~~~~~---~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~V~~vG~~v~~   74 (337)
T cd05283           1 KGYAARDASGK---LEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG--PTKYPLVPGHEIVGIVVAVGSKVTK   74 (337)
T ss_pred             CceEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC--CCCCCcccCcceeeEEEEECCCCcc
Confidence            67888888754   7889 8999999999999999999999999999988763  3456889999999999999999999


Q ss_pred             CCCCCeeEeec-Cc--------------ccc-----------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccch
Q 021628           82 FKVGDEVYGDI-NE--------------KAL-----------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA  135 (310)
Q Consensus        82 ~~~Gd~V~~~~-~~--------------~~~-----------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  135 (310)
                      +++||+|+..+ ..              +..           .+....|+|++|+.++...++++|+++++++++.+++.
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~  154 (337)
T cd05283          75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA  154 (337)
T ss_pred             cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence            99999997321 00              000           01123689999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc-cccCCC
Q 021628          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK  214 (310)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~  214 (310)
                      +.+||+++....+++|++++|.| +|.+|++++++++.+ |++++++++++++.+.++++|.+.+++.+..+. ....++
T Consensus       155 ~~ta~~~~~~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  232 (337)
T cd05283         155 GITVYSPLKRNGVGPGKRVGVVG-IGGLGHLAVKFAKAL-GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS  232 (337)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence            99999999766789999999987 899999999999996 999999999999999999999988887654332 223468


Q ss_pred             ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecC
Q 021628          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDP  279 (310)
Q Consensus       215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (310)
                      +|++|||+|.   ...++++++++|+++.+|......          ...+.  .....+.++.+++++.++++++.   
T Consensus       233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~---  309 (337)
T cd05283         233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPW---  309 (337)
T ss_pred             ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccc---
Confidence            9999999873   588899999999999998653211          11111  11245778999999999998764   


Q ss_pred             CcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          280 KGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      .+.|+++++++|++.+.+++..||+|++
T Consensus       310 ~~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         310 VEVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            3679999999999999999998998874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=4.5e-35  Score=261.73  Aligned_cols=299  Identities=28%  Similarity=0.363  Sum_probs=241.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.+++++    ++. +.|.|.+ .++||+||+.++++|++|+..+.|.++.  ..+|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~~~----~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v   73 (347)
T cd05278           1 MKALVYLGPGKI----GLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG--AKHGMILGHEFVGEVVEVGSDV   73 (347)
T ss_pred             CceEEEecCCce----EEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC--CCCCceeccceEEEEEEECCCc
Confidence            899999987765    888 8999999 9999999999999999999999887743  4568899999999999999999


Q ss_pred             CCCCCCCeeEeecCcc---------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchH
Q 021628           80 KKFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT  136 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  136 (310)
                      +++++||+|++.+...                     ++.+....|+|++|++++.+  .++++|+++++++++.+++++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence            9999999999742110                     00111336899999999987  899999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----
Q 021628          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----  210 (310)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----  210 (310)
                      .|||+++...++++|++|+|.| +|.+|++++++|+.+ |. +++++.+++++.+.++++|.+.+++.+..++..     
T Consensus       154 ~ta~~~~~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~-g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~  231 (347)
T cd05278         154 PTGFHGAELAGIKPGSTVAVIG-AGPVGLCAVAGARLL-GAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL  231 (347)
T ss_pred             hheeehhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence            9999998778899999999987 799999999999996 86 788888888899988999988888776544321     


Q ss_pred             -cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628          211 -LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       211 -~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~  273 (310)
                       ..+++|++||+.|.   ...++++|+++|+++.+|.....           ....+..  ....+.++++++++.++.+
T Consensus       232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (347)
T cd05278         232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKI  311 (347)
T ss_pred             cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCC
Confidence             12479999999863   47889999999999998744211           1111111  1124678899999999998


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCC-CccEEEEe
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVVIHP  308 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~vi~~  308 (310)
                      ++.......|++++++++++.+..+.. .+|+++++
T Consensus       312 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         312 DPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             ChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            864223567999999999999887776 67887653

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=259.36  Aligned_cols=297  Identities=30%  Similarity=0.456  Sum_probs=241.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++..+++.   ++++ +.|.|.+.++||+||+.++++|++|++...|.++  ...+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~   74 (334)
T PRK13771          1 MKAVILPGFKQG---YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP--RMKYPVILGHEVVGTVEEVGENVK   74 (334)
T ss_pred             CeeEEEcCCCCC---cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC--CCCCCeeccccceEEEEEeCCCCc
Confidence            999999999974   6889 8999999999999999999999999998888663  234578899999999999999998


Q ss_pred             CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++......                  ..+....|+|++|+.++.+.++++|+++++.+++.+++++.++|++
T Consensus        75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            8999999998642100                  0111236899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC--CcccccCCCccEEEe
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFD  220 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~dvvi~  220 (310)
                      +....++++++|+|+|++|.+|++++++|+.+ |.+++++++++++++.++++ ++++++.+.  +..... .++|+++|
T Consensus       155 ~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld  231 (334)
T PRK13771        155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKAL-GAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKKI-GGADIVIE  231 (334)
T ss_pred             HHhcCCCCCCEEEEECCCccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHhc-CCCcEEEE
Confidence            96558999999999998899999999999996 99999999999999988877 666655431  111112 37999999


Q ss_pred             CCCC--hHHHHhhcccCCEEEEEeCCCCC----C--------ceEEE--EecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628          221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP----P--------ASSFV--LTSDGSILEKLNPYFESGKVKAIIDPKGPFP  284 (310)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~----~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (310)
                      |.|.  ...++++++++|+++.+|.....    .        ...+.  .....++++.+++++.++.+++.  +++.|+
T Consensus       232 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~  309 (334)
T PRK13771        232 TVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPV--IGAEVS  309 (334)
T ss_pred             cCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcce--EeeeEc
Confidence            9874  57889999999999999854211    1        11111  11236778999999999998754  467899


Q ss_pred             hhhHHHHHHHHHcCCCCccEEEEe
Q 021628          285 FSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       285 ~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++++|++.+.++...+|+++++
T Consensus       310 ~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        310 LSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHHcCCCcceEEEec
Confidence            999999999999888888988864

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-34  Score=255.13  Aligned_cols=294  Identities=33%  Similarity=0.490  Sum_probs=242.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++. ..++++ +.+.|.+.++||+||+.++++|+.|+....+.++. ....|.++|||++|+|+++|++++
T Consensus         2 m~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          2 MRAVTLKGFGGV-DVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP-PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             cEEEEEEecCCC-cceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEeCCCCC
Confidence            999999999886 678888 78888899999999999999999999988876532 234467899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|+++..         .|+|++|++++...++++|++++..+++.+++++.+|++++ +..++++|++|+|+|+
T Consensus        79 ~~~~Gd~V~~~~~---------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga  149 (334)
T PTZ00354         79 RFKEGDRVMALLP---------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG  149 (334)
T ss_pred             CCCCCCEEEEecC---------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998642         58999999999999999999999999999999999999998 4588999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc-ccc------cCCCccEEEeCCCC--hHHHHh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IED------LPEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~------~~~~~dvvi~~~g~--~~~~~~  230 (310)
                      +|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....+ +..      ..+++|++||+.+.  ...+++
T Consensus       150 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  228 (334)
T PTZ00354        150 ASGVGTAAAQLAEKY-GAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAE  228 (334)
T ss_pred             CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence            999999999999996 99988899999999999999998888765432 211      13579999999873  578999


Q ss_pred             hcccCCEEEEEeCCCCCC-c-e----------EEEE---e--cC-------HHHHHHHHHHHHcCCeeEEecCCcccchh
Q 021628          231 AVKEGGRVVSIIGSVTPP-A-S----------SFVL---T--SD-------GSILEKLNPYFESGKVKAIIDPKGPFPFS  286 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~~-~-~----------~~~~---~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (310)
                      +++++|+++.++...... . +          .+..   .  ..       ...++++++++.++.+.+.  +.+.++++
T Consensus       229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~  306 (334)
T PTZ00354        229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLE  306 (334)
T ss_pred             HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHH
Confidence            999999999987532111 0 1          1111   0  00       1335778889999988753  46889999


Q ss_pred             hHHHHHHHHHcCCCCccEEEEeC
Q 021628          287 QTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       287 ~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +++++++.+.++...+|+++++.
T Consensus       307 ~~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        307 EVAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             HHHHHHHHHHhCCCCceEEEecC
Confidence            99999999988887789988653

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.6e-34  Score=255.77  Aligned_cols=299  Identities=31%  Similarity=0.469  Sum_probs=245.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++..++++ . +.+. +.+.|.+.+++|+|++.++++|++|.....|.++ ....+|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~   76 (338)
T cd08254           1 MKAWRFHKGSKG-L-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP-TLTKLPLTLGHEIAGTVVEVGAGVT   76 (338)
T ss_pred             CeeEEEecCCCC-c-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc-ccCCCCEeccccccEEEEEECCCCc
Confidence            999999999887 4 6777 7899999999999999999999999999988764 2345678899999999999999999


Q ss_pred             CCCCCCeeEeecC------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDIN------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++.+.                  .....+....|+|++|+.++...++++|++++..+++.++..+.+||++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  156 (338)
T cd08254          77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA  156 (338)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            9999999987211                  0001112235899999999999999999999999999999999999999


Q ss_pred             H-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCcc
Q 021628          143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKFD  216 (310)
Q Consensus       143 l-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~d  216 (310)
                      + ....++++++|+|.| +|.+|++++++|+.+ |.+|++++.++++.+.++++|.+++++.......     ...+++|
T Consensus       157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~-G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D  234 (338)
T cd08254         157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAM-GAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFD  234 (338)
T ss_pred             HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCce
Confidence            8 467799999999986 799999999999996 9999999999999999999998888776543321     1234799


Q ss_pred             EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EE--EEecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SF--VLTSDGSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                      +++||.|.   .+.++++|+++|+++.++.......+          ..  ........+..++++++++.+++.   .+
T Consensus       235 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~  311 (338)
T cd08254         235 VIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VE  311 (338)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ce
Confidence            99999863   57899999999999999754211111          00  111235778899999999998864   46


Q ss_pred             ccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          282 PFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       282 ~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .|++++++++++.+.+++..+|++++|
T Consensus       312 ~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         312 TRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             eEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            899999999999999999889999875

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-34  Score=259.00  Aligned_cols=299  Identities=28%  Similarity=0.418  Sum_probs=243.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||||++.+++.+   ++++ +.|.|.+.+++|+||+.++++|++|+....|.++  ...+|.++|+|++|+|+.+|+++.
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~g~e~~G~V~~~G~~~~   74 (345)
T cd08260           1 MRAAVYEEFGEP---LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP--DVTLPHVPGHEFAGVVVEVGEDVS   74 (345)
T ss_pred             CeeEEEecCCCC---cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCC--CCCCCeeeccceeEEEEEECCCCc
Confidence            999999988865   6888 8999999999999999999999999999888653  235578999999999999999999


Q ss_pred             CCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchHHHHH
Q 021628           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      .+++||+|++.+..                  .+..+....|+|++|++++..  .++++|+++++++++.+++.+++||
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~  154 (345)
T cd08260          75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF  154 (345)
T ss_pred             cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence            99999999872110                  000012236999999999975  8999999999999999999999999


Q ss_pred             HHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc-----cCC
Q 021628          141 EGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-----LPE  213 (310)
Q Consensus       141 ~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-----~~~  213 (310)
                      +++ +..++.++++|+|+| +|.+|++++++|+.. |.+++++++++++.+.++++|++.+++.+. .++..     ..+
T Consensus       155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  232 (345)
T cd08260         155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASAL-GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG  232 (345)
T ss_pred             HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC
Confidence            998 578899999999999 899999999999996 999999999999999999999998888765 33321     122


Q ss_pred             CccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-------------ceEEEE--ecCHHHHHHHHHHHHcCCeeE
Q 021628          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSFVL--TSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      ++|++||+.|.   ....+++++++|+++.+|......             .+.+..  ......++.++++++++.+.+
T Consensus       233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~  312 (345)
T cd08260         233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP  312 (345)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence            79999999873   478899999999999998543111             111111  123467889999999999876


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ...+.+.+++++++++++.+..+...+|++++
T Consensus       313 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         313 EPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            43346789999999999999998888888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.2e-34  Score=260.60  Aligned_cols=295  Identities=27%  Similarity=0.363  Sum_probs=237.1

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ||+++.+++..   ++++ +.+.|.+++++|+||+.++++|++|++.+.+.++   ..+|.++|||++|+|+++|+++..
T Consensus         2 ~a~~~~~~~~~---~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~---~~~~~i~g~e~~G~V~~vG~~v~~   74 (365)
T cd05279           2 KAAVLWEKGKP---LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP---TPLPVILGHEGAGIVESIGPGVTT   74 (365)
T ss_pred             ceeEEecCCCC---cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC---CCCCcccccceeEEEEEeCCCccc
Confidence            78889987755   6888 8999999999999999999999999999988653   346789999999999999999999


Q ss_pred             CCCCCeeEeecCcccc---------------------------------------CCCCCCCcceeEEEEecCccccCCC
Q 021628           82 FKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKPK  122 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~  122 (310)
                      +++||+|++.+.....                                       .+....|+|++|+.++.+.++++|+
T Consensus        75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  154 (365)
T cd05279          75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP  154 (365)
T ss_pred             CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence            9999999886320000                                       0001247999999999999999999


Q ss_pred             CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 021628          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA  200 (310)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~  200 (310)
                      ++++++++.+++++.+||+++ ..+++++|++|+|+| +|.+|++++++|+.+ |++ ++++++++++++.++++|++++
T Consensus       155 ~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         155 DAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAA-GASRIIAVDINKDKFEKAKQLGATEC  232 (365)
T ss_pred             CCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCee
Confidence            999999999999999999987 578899999999997 799999999999996 886 5666679999999999999888


Q ss_pred             eeCCCC--ccc-----ccCCCccEEEeCCCC---hHHHHhhcc-cCCEEEEEeCCCCCCceEE-----------EEe---
Q 021628          201 IDYTKE--NIE-----DLPEKFDVVFDAVGQ---CDKALKAVK-EGGRVVSIIGSVTPPASSF-----------VLT---  255 (310)
Q Consensus       201 ~~~~~~--~~~-----~~~~~~dvvi~~~g~---~~~~~~~l~-~~G~~v~~g~~~~~~~~~~-----------~~~---  255 (310)
                      ++..+.  ++.     ...+++|++||++|.   ...++++++ ++|+++.+|.........+           ...   
T Consensus       233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~  312 (365)
T cd05279         233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG  312 (365)
T ss_pred             cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence            876554  221     123579999999874   478899999 9999999875431111111           001   


Q ss_pred             --cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          256 --SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                        ...+.+..+++++.++.+++....+++|+++++++|++.+.+++.. |.++
T Consensus       313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             CCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence              2346788899999999988654567899999999999998876654 6554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-34  Score=256.06  Aligned_cols=288  Identities=26%  Similarity=0.368  Sum_probs=227.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++    ++++ +.|.|++.++||+||+.++++|++|.....|.++     +|.++|||++|+|+++|++  
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~--   68 (319)
T cd08242           1 MKALVLDGGLD----LRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA--   68 (319)
T ss_pred             CeeEEEeCCCc----EEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC--
Confidence            89999998664    5999 8999999999999999999999999999888652     5778999999999999988  


Q ss_pred             CCCCCCeeEeecCc------------------cccCCC-CCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE------------------KALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                       +++||+|...+..                  ....+. ...|+|++|++++.+.++++|++++.++++.+ ..+.+++.
T Consensus        69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence             6799999753211                  111111 23689999999999999999999999888764 34446776


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      +++..+++++++|+|+| +|.+|++++++|+.+ |+++++++.++++++.++++|++.+++..+.   ....++|++||+
T Consensus       147 ~~~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~d~vid~  221 (319)
T cd08242         147 ILEQVPITPGDKVAVLG-DGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVETVLPDEAE---SEGGGFDVVVEA  221 (319)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---ccCCCCCEEEEC
Confidence            66788899999999998 899999999999996 9999999999999999999998887766432   223579999999


Q ss_pred             CCC---hHHHHhhcccCCEEEEEeCCCCCCceE---E------EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          222 VGQ---CDKALKAVKEGGRVVSIIGSVTPPASS---F------VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      .|.   ...++++++++|+++..+.......+.   +      ........++++++++.++.+++...+++.|++++++
T Consensus       222 ~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~  301 (319)
T cd08242         222 TGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEAL  301 (319)
T ss_pred             CCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHHH
Confidence            874   478889999999999876432111110   0      0111112488899999999985433356899999999


Q ss_pred             HHHHHHHcCCCCccEEEEe
Q 021628          290 EAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~~  308 (310)
                      +|++.+.++. .+|+++++
T Consensus       302 ~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         302 EAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHhcCC-ceEEEeCC
Confidence            9999998666 47888763

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=260.48  Aligned_cols=295  Identities=27%  Similarity=0.375  Sum_probs=238.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++..++..   ++++ +.+.|++.++||+|++.++++|++|...+.|.++   ..+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v~   73 (363)
T cd08279           1 MRAAVLHEVGKP---LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP---APLPAVLGHEGAGVVEEVGPGVT   73 (363)
T ss_pred             CeEEEEecCCCC---ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC---CCCCccccccceEEEEEeCCCcc
Confidence            999999998765   7888 8999999999999999999999999998888663   34577899999999999999999


Q ss_pred             CCCCCCeeEeecCc--------------cccC------------------------CCCCCCcceeEEEEecCccccCCC
Q 021628           81 KFKVGDEVYGDINE--------------KALD------------------------HPKRNGSLAEYTAVEENLLALKPK  122 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~--------------~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~  122 (310)
                      .+++||+|++.+..              ....                        .....|+|++|+.++.+.++++|+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~  153 (363)
T cd08279          74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD  153 (363)
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence            99999999985210              0000                        002358999999999999999999


Q ss_pred             CCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEE
Q 021628          123 NLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLA  200 (310)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~  200 (310)
                      ++++++++.+++++.+||+++ ...++++|++|+|+| +|.+|++++++|+.+ |++ ++++++++++.+.++++|++++
T Consensus       154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~-G~~~Vi~~~~~~~~~~~~~~~g~~~v  231 (363)
T cd08279         154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIA-GASRIIAVDPVPEKLELARRFGATHT  231 (363)
T ss_pred             CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEEcCCHHHHHHHHHhCCeEE
Confidence            999999999999999999987 578899999999996 799999999999996 986 8888889999999999999888


Q ss_pred             eeCCCCcccc----c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC------------ceEEEEe----
Q 021628          201 IDYTKENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP------------ASSFVLT----  255 (310)
Q Consensus       201 ~~~~~~~~~~----~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~------------~~~~~~~----  255 (310)
                      ++.+..++..    .  .+++|+++|+++.   ....+++++++|+++.++......            ...+...    
T Consensus       232 v~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T cd08279         232 VNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS  311 (363)
T ss_pred             eCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence            8776543221    1  3579999999873   478899999999999987533100            1011100    


Q ss_pred             -cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccE
Q 021628          256 -SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV  304 (310)
Q Consensus       256 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~  304 (310)
                       ...+.++++++++.++.+.+...+++.|+++++++|++.+.+++..+.+
T Consensus       312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  361 (363)
T cd08279         312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGV  361 (363)
T ss_pred             cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEE
Confidence             2356788999999999987542345789999999999999888776333

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.9e-34  Score=253.97  Aligned_cols=296  Identities=32%  Similarity=0.441  Sum_probs=241.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++..+++.   +.++ +.|.|++.+++|+|++.++++|++|++...|.++.  ...|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~---~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~v~~~G~~v~   74 (332)
T cd08259           1 MKAAILHKPNKP---LQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR--GKYPLILGHEIVGTVEEVGEGVE   74 (332)
T ss_pred             CeEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC--CCCCeeccccceEEEEEECCCCc
Confidence            999999874443   6888 89999999999999999999999999999887642  34578999999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|+++.....                  ..+....|+|++|++++...++++|+++++++++.+++++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            9999999998642100                  0011226899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEEE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVVF  219 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvvi  219 (310)
                      ++.+++.++++++|+|++|.+|++++++++.. |.+++.+++++++.+.+++++.+.+++.++  +..   ...++|+++
T Consensus       155 l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~  231 (332)
T cd08259         155 LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKAL-GARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVI  231 (332)
T ss_pred             HHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEE
Confidence            96688999999999999999999999999996 999999999999999998888877776543  111   123799999


Q ss_pred             eCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628          220 DAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFP  284 (310)
Q Consensus       220 ~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (310)
                      +++|.  ...++++++++|+++.++.....           ....+..  .....+++++++++.++.+++.  +++.|+
T Consensus       232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~  309 (332)
T cd08259         232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPV--IDRVVS  309 (332)
T ss_pred             ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccc--eeEEEc
Confidence            99884  57889999999999998754211           0111111  1235678899999999998764  467899


Q ss_pred             hhhHHHHHHHHHcCCCCccEEEE
Q 021628          285 FSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       285 ~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++++++.+.++...+|++++
T Consensus       310 ~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         310 LEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHHcCCcccEEEeC
Confidence            99999999999988888888864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.8e-34  Score=256.25  Aligned_cols=296  Identities=29%  Similarity=0.398  Sum_probs=238.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+++.+    .++ +.+.|++.+++|+||+.++++|++|+....|.++  +..+|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~----~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~--~~~~~~~~g~~~~G~V~~~G~~v~   73 (343)
T cd08235           1 MKAAVLHGPNDV----RLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT--DLKPPRILGHEIAGEIVEVGDGVT   73 (343)
T ss_pred             CeEEEEecCCce----EEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc--cCCCCcccccceEEEEEeeCCCCC
Confidence            899999988754    888 8999999999999999999999999999888653  234577899999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCc-----cccCCCCCChhhhccccchHH
Q 021628           81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENL-----LALKPKNLSFVEAASLPLATE  137 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~  137 (310)
                      .+++||+|++......                  ..+....|+|++|+.++...     ++++|+++++.+++.+ +.+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            9999999998632000                  00112469999999999998     9999999999999876 7888


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------
Q 021628          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------  210 (310)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------  210 (310)
                      +||+++...++++|++|+|+| +|.+|++++++|+.+ |.+ ++++++++++.+.+++++.++++++++.++..      
T Consensus       153 ~a~~~l~~~~~~~g~~VlV~g-~g~vg~~~~~la~~~-g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~  230 (343)
T cd08235         153 CCINAQRKAGIKPGDTVLVIG-AGPIGLLHAMLAKAS-GARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT  230 (343)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence            999999766899999999997 799999999999996 998 88888899999988889998888776554322      


Q ss_pred             cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC--C----------ceEEE--EecCHHHHHHHHHHHHcCCe
Q 021628          211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP--P----------ASSFV--LTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~--~----------~~~~~--~~~~~~~~~~~~~~~~~~~~  273 (310)
                      ..+++|+++|+++.   ....+++++++|+++.++.....  .          ...+.  .....+.++.+++++.++.+
T Consensus       231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l  310 (343)
T cd08235         231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI  310 (343)
T ss_pred             CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence            12469999999873   47889999999999998754321  1          11111  11235678889999999988


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ++...+...|++++++++++.+.+++ .+|+++.
T Consensus       311 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         311 DVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             ChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            64222356899999999999999888 8888863

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.7e-34  Score=252.41  Aligned_cols=294  Identities=30%  Similarity=0.383  Sum_probs=238.8

Q ss_pred             CEEEEEcccCCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.+++++ .+.++++ +.+.|.+.++||+||+.++++|++|+....|.++.  ..+|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~--~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP--PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC--CCCCccccccccEEEEEECCCC
Confidence            899999988841 0236888 78888899999999999999999999999887642  3568899999999999999999


Q ss_pred             CCCCCCCeeEeecCc-------c------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           80 KKFKVGDEVYGDINE-------K------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~-------~------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      +++++||+|++.+..       .            ...+....|+|++|+.++...++++|+++++.+++.+++++.+||
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~  157 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY  157 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence            999999999863110       0            001111368999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEe
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ++++.++++++++|+|+| +|.+|++++++++.. |.+++++++++++.+.++++|++.+++....    ..+++|++++
T Consensus       158 ~~~~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~vD~vi~  231 (329)
T cd08298         158 RALKLAGLKPGQRLGLYG-FGASAHLALQIARYQ-GAEVFAFTRSGEHQELARELGADWAGDSDDL----PPEPLDAAII  231 (329)
T ss_pred             HHHHhhCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEcCChHHHHHHHHhCCcEEeccCcc----CCCcccEEEE
Confidence            999889999999999998 899999999999996 9999999999999999999999877765432    1347899999


Q ss_pred             CCC---ChHHHHhhcccCCEEEEEeCCCC-CCceEE-------EE----ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628          221 AVG---QCDKALKAVKEGGRVVSIIGSVT-PPASSF-------VL----TSDGSILEKLNPYFESGKVKAIIDPKGPFPF  285 (310)
Q Consensus       221 ~~g---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
                      +.+   ..+.++++++++|+++.+|.... ...+++       .+    ......+..+++++.++.+++.   ++.|++
T Consensus       232 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~---~~~~~~  308 (329)
T cd08298         232 FAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE---VETYPL  308 (329)
T ss_pred             cCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCce---EEEEeH
Confidence            865   35889999999999998874321 111111       00    1234668889999999988763   478999


Q ss_pred             hhHHHHHHHHHcCCCCccEEE
Q 021628          286 SQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       286 ~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      +++++|++.+.+++..+|+++
T Consensus       309 ~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         309 EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHHHcCCCcceeeC
Confidence            999999999999888888764

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=4.6e-34  Score=255.51  Aligned_cols=296  Identities=43%  Similarity=0.669  Sum_probs=237.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCC-------------CCCCCCccccc
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-------------TDSPLPTIPGY   66 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------------~~~~~p~~~G~   66 (310)
                      |||+++.++|++.+.++++ +.+.|+| +++||+||+.++++|++|+....|....             ....+|.++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~   79 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR   79 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence            9999999988852357888 8999999 5999999999999999999988774210             02355889999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hh
Q 021628           67 DVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER  145 (310)
Q Consensus        67 e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~  145 (310)
                      |++|+|+++|++++++++||+|++....      ...|+|++|+.++...++++|+++++.+++.+++.+.++|+++ +.
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~  153 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPP------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNV  153 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCC------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHh
Confidence            9999999999999999999999986421      1358999999999999999999999999999999999999998 45


Q ss_pred             cccC----CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccEE
Q 021628          146 SAFS----AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDVV  218 (310)
Q Consensus       146 ~~~~----~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dvv  218 (310)
                      +.+.    +|++|+|+|++|.+|++++++|+.+ |+++++++++ ++.+.++++|.+.+++.+..++..   ..+++|++
T Consensus       154 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~-G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~v  231 (350)
T cd08248         154 GGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAW-GAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVI  231 (350)
T ss_pred             ccCCCccCCCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHhcCCCCEE
Confidence            6664    4999999998999999999999996 9998887765 577788899988888765433211   13579999


Q ss_pred             EeCCCC--hHHHHhhcccCCEEEEEeCCCCC--C-----------ceEE----------------E-EecCHHHHHHHHH
Q 021628          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----------ASSF----------------V-LTSDGSILEKLNP  266 (310)
Q Consensus       219 i~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----------~~~~----------------~-~~~~~~~~~~~~~  266 (310)
                      ||+.|.  ...++++++++|+++.++.....  .           ...+                . .......+.++++
T Consensus       232 i~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (350)
T cd08248         232 LDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAK  311 (350)
T ss_pred             EECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHH
Confidence            999874  57899999999999998743210  0           0000                0 0112456888999


Q ss_pred             HHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ++.++.+.+.  +++.|++++++++++.+.++...+|++++
T Consensus       312 ~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         312 LVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHhCCCEecc--cceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            9999998754  56889999999999999888777787763

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=4.3e-34  Score=255.14  Aligned_cols=295  Identities=28%  Similarity=0.402  Sum_probs=236.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCC-CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++..++.    ++++ +.+.|++. ++||+||+.++++|++|+....|.++   ..+|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~~----~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v   72 (344)
T cd08284           1 MKAVVFKGPGD----VRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP---STPGFVLGHEFVGEVVEVGPEV   72 (344)
T ss_pred             CeeEEEecCCC----ceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC---CCCCcccccceEEEEEeeCCCc
Confidence            99999998754    5888 89999985 99999999999999999998888653   3457789999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------cc----------------CCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccch
Q 021628           80 KKFKVGDEVYGDINEK------AL----------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLA  135 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------~~----------------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~  135 (310)
                      ..+++||+|++.+...      +.                ......|+|++|+.++..  .++++|+++++++++.+++.
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            9999999999864100      00                001125899999999965  99999999999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----
Q 021628          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----  210 (310)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----  210 (310)
                      ++|||+++...++.+|++|+|+| +|.+|++++++|+.+ |+ ++++++.++++.+.++++|+. +++.+..++..    
T Consensus       153 ~~ta~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~-g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAKRAQVRPGDTVAVIG-CGPVGLCAVLSAQVL-GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhHhcCCccCCEEEEEC-CcHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence            99999999768889999999997 899999999999996 96 788888888899988999975 34544333211    


Q ss_pred             --cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC-----------CCceEEEE--ecCHHHHHHHHHHHHcCC
Q 021628          211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-----------PPASSFVL--TSDGSILEKLNPYFESGK  272 (310)
Q Consensus       211 --~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~~~~  272 (310)
                        ..+++|++||++|.   ...++++++++|+++.+|....           .....+..  ......+.++++++.++.
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR  309 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCC
Confidence              12579999999873   5788999999999999985431           11222221  234567889999999999


Q ss_pred             eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++...+.+.|++++++++++.+.+++. +|++++
T Consensus       310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         310 LDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             CChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence            8763334678999999999999888777 898875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=7.2e-34  Score=251.62  Aligned_cols=296  Identities=27%  Similarity=0.335  Sum_probs=232.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++..++++ +.++++ +.|.|++.++||+||+.++++|++|+....|.++. ...+|.++|||++|+|+++  +++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~--~~~   75 (325)
T cd05280           1 FKALVVEEQDGG-VSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV-TRNYPHTPGIDAAGTVVSS--DDP   75 (325)
T ss_pred             CceEEEcccCCC-CcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC-CCCCCCccCcccEEEEEEe--CCC
Confidence            999999999875 568999 89999999999999999999999999998887532 2346788999999999998  456


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hc--ccC-CCCEEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RS--AFS-AGKSILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~--~~~-~g~~vlI  156 (310)
                      .+++||+|++.....   +....|+|++|++++.+.++++|+++++.+++.+++++.++++++. ..  ... .+++|+|
T Consensus        76 ~~~~Gd~V~~~~~~~---g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI  152 (325)
T cd05280          76 RFREGDEVLVTGYDL---GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV  152 (325)
T ss_pred             CCCCCCEEEEccccc---CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence            799999999863111   1123689999999999999999999999999999999999999884 22  335 3579999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---c-ccCCCccEEEeCCCC--hHHHHh
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---E-DLPEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~~~~~dvvi~~~g~--~~~~~~  230 (310)
                      +|++|.+|++++++|+.+ |++|+++++++++++.++++|++++++......   . ...+++|++||+.|.  ...+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~  231 (325)
T cd05280         153 TGATGGVGSIAVAILAKL-GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLK  231 (325)
T ss_pred             ECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHH
Confidence            998899999999999996 999999999999999999999988887653211   1 113479999999874  588999


Q ss_pred             hcccCCEEEEEeCCCCC-----------CceEEEE---ec-C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          231 AVKEGGRVVSIIGSVTP-----------PASSFVL---TS-D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~---~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      +++++|+++.+|.....           ....+..   .. .    ...++.+.+++..+....   +...|++++++++
T Consensus       232 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a  308 (325)
T cd05280         232 QTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEI---VVREISLEELPEA  308 (325)
T ss_pred             hhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccc---eeeEecHHHHHHH
Confidence            99999999999854311           0111111   00 1    123445555555553332   3578999999999


Q ss_pred             HHHHHcCCCCccEEEEe
Q 021628          292 FSHLESSRATGKVVIHP  308 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~  308 (310)
                      ++.+.+++..||+++++
T Consensus       309 ~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         309 IDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHhcCCcceEEEEeC
Confidence            99999999889998864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.2e-34  Score=255.50  Aligned_cols=297  Identities=34%  Similarity=0.486  Sum_probs=238.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++.+| + ..++++ +.+.|+++++||+||+.++++|++|+....+.+   ...+|.++|||++|+|+.+|++++
T Consensus         1 m~a~~~~~~~-~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~   74 (339)
T cd08249           1 QKAAVLTGPG-G-GLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF---IPSYPAILGCDFAGTVVEVGSGVT   74 (339)
T ss_pred             CceEEeccCC-C-Cccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc---ccCCCceeeeeeeEEEEEeCCCcC
Confidence            9999999986 4 557888 899999999999999999999999988765543   123467899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hccc----------C
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAF----------S  149 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~----------~  149 (310)
                      .+++||+|++....... +....|+|++|++++...++++|+++++.+++.+++.+.+||+++. ..+.          +
T Consensus        75 ~~~~Gd~V~~~~~~~~~-~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~  153 (339)
T cd08249          75 RFKVGDRVAGFVHGGNP-NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPAS  153 (339)
T ss_pred             cCCCCCEEEEEeccccC-CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCC
Confidence            99999999987531100 1123589999999999999999999999999999999999999984 4443          7


Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~  224 (310)
                      ++++|+|+|++|.+|++++++|+.+ |++++.++ ++++++.++++|.+++++.+..++..     ..+++|++||++|.
T Consensus       154 ~~~~vlI~ga~g~vg~~~~~~a~~~-G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~  231 (339)
T cd08249         154 KGKPVLIWGGSSSVGTLAIQLAKLA-GYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCIST  231 (339)
T ss_pred             CCCEEEEEcChhHHHHHHHHHHHHc-CCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeecc
Confidence            8999999998899999999999996 99998877 56888999999998888876544321     23579999999874


Q ss_pred             ---hHHHHhhccc--CCEEEEEeCCCCC----CceEE---EE-e----------cCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628          225 ---CDKALKAVKE--GGRVVSIIGSVTP----PASSF---VL-T----------SDGSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       225 ---~~~~~~~l~~--~G~~v~~g~~~~~----~~~~~---~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                         ...+++++++  +|+++.++.....    .....   .. .          .....+..+++++.++++.+..  ..
T Consensus       232 ~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~  309 (339)
T cd08249         232 PESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VR  309 (339)
T ss_pred             chHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ce
Confidence               4789999999  9999999855321    11111   10 0          1124577889999999988642  34


Q ss_pred             ccc--hhhHHHHHHHHHcCC-CCccEEEEe
Q 021628          282 PFP--FSQTLEAFSHLESSR-ATGKVVIHP  308 (310)
Q Consensus       282 ~~~--~~~~~~a~~~~~~~~-~~~k~vi~~  308 (310)
                      .++  ++++++|++.+.+++ ..+|+++++
T Consensus       310 ~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         310 VVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             ecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            566  999999999999888 888998864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=4.1e-34  Score=258.00  Aligned_cols=296  Identities=27%  Similarity=0.347  Sum_probs=233.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.+++.    ++++ +.|.|++ +++||+||+.++++|++|++...|.++   ..+|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~~----~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~---~~~p~~~g~e~~G~V~~vG~~v   72 (375)
T cd08282           1 MKAVVYGGPGN----VAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG---AEPGLVLGHEAMGEVEEVGSAV   72 (375)
T ss_pred             CceEEEecCCc----eeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC---CCCCceeccccEEEEEEeCCCC
Confidence            89999987765    4888 8999986 899999999999999999999988764   3468899999999999999999


Q ss_pred             CCCCCCCeeEeecCcccc----------------------------CCCCCCCcceeEEEEecC--ccccCCCCCChh--
Q 021628           80 KKFKVGDEVYGDINEKAL----------------------------DHPKRNGSLAEYTAVEEN--LLALKPKNLSFV--  127 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~----------------------------~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~--  127 (310)
                      +.+++||+|++.+.....                            .....+|+|++|+.+|..  .++++|+++++.  
T Consensus        73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence            999999999874210000                            001125899999999976  899999999998  


Q ss_pred             -hhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCC
Q 021628          128 -EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK  205 (310)
Q Consensus       128 -~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~  205 (310)
                       +++.+++++.+||+++..+++++|++|+|.| .|.+|++++++|+.+ |+ +++++++++++.+.++++|+. .++.++
T Consensus       153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~-G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~  229 (375)
T cd08282         153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFG-AGPVGLMAAYSAILR-GASRVYVVDHVPERLDLAESIGAI-PIDFSD  229 (375)
T ss_pred             hheeeecchHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence             4677788899999999778899999999987 799999999999996 87 688888899999999999984 455544


Q ss_pred             Cccc-----ccCCCccEEEeCCCC--------------hHHHHhhcccCCEEEEEeCCCCC-C----------ceEEE--
Q 021628          206 ENIE-----DLPEKFDVVFDAVGQ--------------CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFV--  253 (310)
Q Consensus       206 ~~~~-----~~~~~~dvvi~~~g~--------------~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~--  253 (310)
                      ++..     ...+++|+++||+|.              +..++++++++|+++.+|..... .          ...+.  
T Consensus       230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  309 (375)
T cd08282         230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG  309 (375)
T ss_pred             ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence            3321     112479999999873              47889999999999887753210 0          00010  


Q ss_pred             --------E----ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          254 --------L----TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       254 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                              .    ......+..+++++.++++++...+++.|++++++++++.+.++. .+|+++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence                    0    002356788899999999986433578999999999999999888 78988753

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.8e-34  Score=252.47  Aligned_cols=297  Identities=31%  Similarity=0.402  Sum_probs=237.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++.++.+    ++. +.+.|++.++||+|++.++++|+.|+....+.++.  ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~----~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~~~~~~g~e~~G~V~~~G~~v~   73 (337)
T cd08261           1 MKALVCEKPGRL----EVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF--ASYPRILGHELSGEVVEVGEGVA   73 (337)
T ss_pred             CeEEEEeCCCce----EEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc--CCCCcccccccEEEEEEeCCCCC
Confidence            899999987654    888 89999999999999999999999999988886542  24577899999999999999999


Q ss_pred             CCCCCCeeEeecCcc------c---c---------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEK------A---L---------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------~---~---------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++.....      +   .         -+....|+|++|+.++.+ ++++|+++++++++.+ ..+++++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~  151 (337)
T cd08261          74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA  151 (337)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence            999999998742100      0   0         001136899999999999 9999999999999877 567788888


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCcc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFD  216 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~d  216 (310)
                      +...++.+|++|+|+| +|.+|.+++++|+.+ |.+++++.+++++.+.++++|.+++++..+.++..      ..+++|
T Consensus       152 ~~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~-g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd  229 (337)
T cd08261         152 VRRAGVTAGDTVLVVG-AGPIGLGVIQVAKAR-GARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD  229 (337)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence            8778899999999997 799999999999996 99999999999999999999999998876544321      124699


Q ss_pred             EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                      +++|+.|.   ....+++|+++|+++.++....+          ..+.+..  ....+.++.+++++.++.+++...+..
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~  309 (337)
T cd08261         230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH  309 (337)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence            99999863   47889999999999988744311          1111211  123457888999999999886211356


Q ss_pred             ccchhhHHHHHHHHHcC-CCCccEEEEe
Q 021628          282 PFPFSQTLEAFSHLESS-RATGKVVIHP  308 (310)
Q Consensus       282 ~~~~~~~~~a~~~~~~~-~~~~k~vi~~  308 (310)
                      .+++++++++++.+.++ ...+|+++++
T Consensus       310 ~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         310 RFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             EeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            89999999999999888 4778988864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-33  Score=248.26  Aligned_cols=300  Identities=34%  Similarity=0.443  Sum_probs=245.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++...+.. +.++++ +.+.|.+.++||+||+.++++|++|++...|.++. ....|.++|||++|+|+++|+.++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~G~~~~   77 (336)
T cd08276           1 MKAWRLSGGGGL-DNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP-PVKDPLIPLSDGAGEVVAVGEGVT   77 (336)
T ss_pred             CeEEEEeccCCC-cceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcccccceeEEEEEeCCCCc
Confidence            999999988655 668888 88888899999999999999999999988886643 224678899999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hhcc
Q 021628           81 KFKVGDEVYGDINEKA------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSA  147 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~  147 (310)
                      ++++||+|++......            ..+....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ +...
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~  157 (336)
T cd08276          78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP  157 (336)
T ss_pred             CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence            9999999998642100            01122368899999999999999999999999999999999999998 4678


Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc------cCCCccEEEe
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED------LPEKFDVVFD  220 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~------~~~~~dvvi~  220 (310)
                      +++|++|+|+| +|.+|++++++++.+ |++++++++++++.+.+.++|.+.+++... .++..      ..+++|++||
T Consensus       158 ~~~g~~vli~g-~g~~g~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  235 (336)
T cd08276         158 LKPGDTVLVQG-TGGVSLFALQFAKAA-GARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE  235 (336)
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence            99999999996 899999999999996 999999999999999998899888887654 33211      1247999999


Q ss_pred             CCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628          221 AVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPF  285 (310)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
                      +.+.  ...++++++++|+++.+|.....           ....+..  ......+.++++++.++.+.+.  .++.|++
T Consensus       236 ~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~  313 (336)
T cd08276         236 VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPV--IDRVFPF  313 (336)
T ss_pred             CCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccc--cCcEEeH
Confidence            9873  57899999999999999854321           1111111  1235678889999998888764  4688999


Q ss_pred             hhHHHHHHHHHcCCCCccEEEE
Q 021628          286 SQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       286 ~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ++++++++.+.++...+|++++
T Consensus       314 ~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         314 EEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHHHHHHHHHHhCCCCceEEEe
Confidence            9999999999988888898875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.8e-33  Score=250.13  Aligned_cols=294  Identities=35%  Similarity=0.471  Sum_probs=236.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.    ++. +.+.|++.++||+||+.++++|++|+....|.++   ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~----~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~---~~~p~~~g~~~~G~v~~vG~~v~   72 (334)
T cd08234           1 MKALVYEGPGEL----EVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG---AAPPLVPGHEFAGVVVAVGSKVT   72 (334)
T ss_pred             CeeEEecCCCce----EEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence            999999988754    888 8999999999999999999999999998888763   23678899999999999999999


Q ss_pred             CCCCCCeeEeecCccc----c--------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA----L--------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~----~--------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++......    .              .+....|++++|++++.+.++++|++++..+++.. +.+.+++++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  151 (334)
T cd08234          73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG  151 (334)
T ss_pred             CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence            9999999987321100    0              01114689999999999999999999999988766 677889998


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDV  217 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dv  217 (310)
                      +..+++++|++|+|+| +|.+|.+++++|+.+ |++ ++++++++++.+.++++|.+.+++.+..+..    ...+++|+
T Consensus       152 l~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~  229 (334)
T cd08234         152 LDLLGIKPGDSVLVFG-AGPIGLLLAQLLKLN-GASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV  229 (334)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence            8778899999999997 799999999999996 987 7788889999999999998877776544321    12357999


Q ss_pred             EEeCCCC---hHHHHhhcccCCEEEEEeCCCCC------------CceEEE-EecCHHHHHHHHHHHHcCCeeEEecCCc
Q 021628          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP------------PASSFV-LTSDGSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                      +||+.|.   ....+++++++|+++.+|.....            ....+. .......++++++++.++.+.+...+..
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  309 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH  309 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence            9999863   47889999999999999754321            111111 1234567889999999999875433457


Q ss_pred             ccchhhHHHHHHHHHcCCCCccEEE
Q 021628          282 PFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       282 ~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      .|++++++++++.+.+ ...+|+++
T Consensus       310 ~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         310 RLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EecHHHHHHHHHHHhc-CCceEEEe
Confidence            8999999999999988 66778876

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.5e-33  Score=247.41  Aligned_cols=293  Identities=30%  Similarity=0.421  Sum_probs=238.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++...+.. ..+++. +.+.|++.++||+||+.++++|++|+....+.++  ....|.++|||++|+|+++|.  .
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~--~   74 (320)
T cd08243           1 MKAIVIEQPGGP-EVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP--SVKFPRVLGIEAVGEVEEAPG--G   74 (320)
T ss_pred             CeEEEEcCCCCc-cceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCccccceeEEEEEEecC--C
Confidence            899999988866 667887 7888889999999999999999999998887653  234578899999999999995  5


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|+++..+..   ....|+|++|+.++...++++|+++++.+++.+++++.+||+++. ...+++|++|+|+|+
T Consensus        75 ~~~~Gd~V~~~~~~~~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga  151 (320)
T cd08243          75 TFTPGQRVATAMGGMG---RTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGG  151 (320)
T ss_pred             CCCCCCEEEEecCCCC---CCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            7999999998753221   123589999999999999999999999999999999999999984 577899999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccEEEeCCCC--hHHHHhhcc
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGQ--CDKALKAVK  233 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dvvi~~~g~--~~~~~~~l~  233 (310)
                      +|.+|++++++|+.+ |++++.+++++++.+.++++|+++++... .++.    ...+++|+++|++|.  ....+++++
T Consensus       152 ~g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~  229 (320)
T cd08243         152 TSSVGLAALKLAKAL-GATVTATTRSPERAALLKELGADEVVIDD-GAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLR  229 (320)
T ss_pred             CChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEecC-ccHHHHHHHhCCCceEEEECCChHHHHHHHHHhc
Confidence            899999999999996 99999999999999999999988876432 2211    114579999999874  578899999


Q ss_pred             cCCEEEEEeCCCCC---------------CceEEEEe----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHH
Q 021628          234 EGGRVVSIIGSVTP---------------PASSFVLT----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSH  294 (310)
Q Consensus       234 ~~G~~v~~g~~~~~---------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  294 (310)
                      ++|+++.+|.....               ....+...    .....+..+++++.++.+++.  +++.|+++++++|++.
T Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~  307 (320)
T cd08243         230 PGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAY  307 (320)
T ss_pred             cCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHH
Confidence            99999999853110               01111110    112457788999999998763  4678999999999999


Q ss_pred             HHcCCCCccEEE
Q 021628          295 LESSRATGKVVI  306 (310)
Q Consensus       295 ~~~~~~~~k~vi  306 (310)
                      +.++...+|+++
T Consensus       308 ~~~~~~~~kvvv  319 (320)
T cd08243         308 MESNRAFGKVVV  319 (320)
T ss_pred             HHhCCCCCcEEe
Confidence            988888788775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.6e-33  Score=248.01  Aligned_cols=294  Identities=26%  Similarity=0.346  Sum_probs=234.6

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ||+++...+.+ +.++++ +.|.|.++++||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+.  .+++.
T Consensus         1 ~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~~   75 (323)
T TIGR02823         1 KALVVEKEDGK-VSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV-VRSYPMIPGIDAAGTVVS--SEDPR   75 (323)
T ss_pred             CeEEEccCCCC-cceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC-CCCCCccceeeeEEEEEe--cCCCC
Confidence            78999998877 788999 99999999999999999999999999998887632 234588899999999988  56678


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH---hcccCCCC-EEEEE
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILVL  157 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI~  157 (310)
                      +++||+|++.....   +....|++++|+.+|.+.++++|+++++++++.+++.+.+++.++.   ...+.+|+ +|+|+
T Consensus        76 ~~~Gd~V~~~~~~~---~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~  152 (323)
T TIGR02823        76 FREGDEVIVTGYGL---GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVT  152 (323)
T ss_pred             CCCCCEEEEccCCC---CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEE
Confidence            99999999864211   1123689999999999999999999999999999999999988773   34588999 99999


Q ss_pred             cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhhc
Q 021628          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       158 g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      |++|.+|++++++|+.+ |++++++++++++.+.++++|++.+++.++.+..   ....++|+++||+|.  ....++++
T Consensus       153 g~~g~vg~~~~~la~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l  231 (323)
T TIGR02823       153 GATGGVGSLAVAILSKL-GYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQL  231 (323)
T ss_pred             cCCcHHHHHHHHHHHHc-CCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHh
Confidence            98899999999999996 9999999998888899999999888876543221   112358999999883  57889999


Q ss_pred             ccCCEEEEEeCCCC-----------CCceEEEEe----c----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628          233 KEGGRVVSIIGSVT-----------PPASSFVLT----S----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS  293 (310)
Q Consensus       233 ~~~G~~v~~g~~~~-----------~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  293 (310)
                      +++|+++.+|....           .....+...    .    ....+..+.+++..+.+...   .+.|+++++++|++
T Consensus       232 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~a~~  308 (323)
T TIGR02823       232 KYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI---TREITLEELPEALE  308 (323)
T ss_pred             CCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc---eeeecHHHHHHHHH
Confidence            99999999985421           111111110    0    12235566677777776542   35899999999999


Q ss_pred             HHHcCCCCccEEEE
Q 021628          294 HLESSRATGKVVIH  307 (310)
Q Consensus       294 ~~~~~~~~~k~vi~  307 (310)
                      .+.+++..+|++++
T Consensus       309 ~~~~~~~~~k~vv~  322 (323)
T TIGR02823       309 QILAGQHRGRTVVD  322 (323)
T ss_pred             HHhCCCccceEEEe
Confidence            99999988898875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=9.7e-34  Score=253.01  Aligned_cols=296  Identities=24%  Similarity=0.283  Sum_probs=231.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||+++++.+++.    +++ +.|.|++ +++||+||+.++++|++|+..+.|.++   ...|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~~~----~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~g~e~~G~V~~vG~~v   72 (345)
T cd08287           1 MRATVIHGPGDI----RVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP---TRAPAPIGHEFVGVVEEVGSEV   72 (345)
T ss_pred             CceeEEecCCce----eEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC---CCCCcccccceEEEEEEeCCCC
Confidence            999999987755    888 8999986 999999999999999999998888653   2357889999999999999999


Q ss_pred             CCCCCCCeeEeec-Cc-----------------cccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhc-----cccc
Q 021628           80 KKFKVGDEVYGDI-NE-----------------KALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAA-----SLPL  134 (310)
Q Consensus        80 ~~~~~Gd~V~~~~-~~-----------------~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~  134 (310)
                      .++++||+|++.. ..                 ....+....|+|++|++++.+  .++++|+++++..+.     .+..
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            9999999998721 10                 001112345999999999975  999999999872221     1225


Q ss_pred             hHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc---
Q 021628          135 ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED---  210 (310)
Q Consensus       135 ~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---  210 (310)
                      .+.+|++++..+++++|++|+|.| +|.+|++++++|+.+ |++ ++++.+++++.+.++++|+++++++....+..   
T Consensus       153 ~~~~a~~~~~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~-G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~  230 (345)
T cd08287         153 VMGTGHHAAVSAGVRPGSTVVVVG-DGAVGLCAVLAAKRL-GAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR  230 (345)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence            678899998778899999999987 899999999999996 986 66667788888888999999988876543211   


Q ss_pred             ---cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe--cCHHHHHHHHHHHHcCC
Q 021628          211 ---LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT--SDGSILEKLNPYFESGK  272 (310)
Q Consensus       211 ---~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~  272 (310)
                         ...++|+++|++|.   ...++++++++|+++.++......          ...+...  .....+.++++++.++.
T Consensus       231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (345)
T cd08287         231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR  310 (345)
T ss_pred             HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence               12479999999863   588999999999999987543111          1111111  22467889999999999


Q ss_pred             eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++...+++.|++++++++++.+.++... |++|+
T Consensus       311 l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         311 INPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             CCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence            88643346789999999999998876654 88875

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=5.4e-33  Score=247.24  Aligned_cols=295  Identities=35%  Similarity=0.532  Sum_probs=240.6

Q ss_pred             CEEEEEcccCCCcc---ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEYGNSQS---VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~g~~~~---~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |||+++++++++ +   .++++ +.+.|++.+++|+||+.++++|++|+..+.+.++  ...+|.++|||++|+|+.+|+
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~   76 (336)
T cd08252           1 MKAIGFTQPLPI-TDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP--VPGQPKILGWDASGVVEAVGS   76 (336)
T ss_pred             CceEEecCCCCC-CcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC--CCCCCcccccceEEEEEEcCC
Confidence            899999999887 4   47777 7898999999999999999999999998877653  234567899999999999999


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCC-----C
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSA-----G  151 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~-----g  151 (310)
                      +++.+++||+|++...      ....|+|++|+.++...++++|++++.++++.+++++.+||+++ +.+.+.+     |
T Consensus        77 ~v~~~~~Gd~V~~~~~------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g  150 (336)
T cd08252          77 EVTLFKVGDEVYYAGD------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEG  150 (336)
T ss_pred             CCCCCCCCCEEEEcCC------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCC
Confidence            9999999999998531      01368999999999999999999999999999999999999997 5677776     9


Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----c-cCCCccEEEeCCC--
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----D-LPEKFDVVFDAVG--  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-~~~~~dvvi~~~g--  223 (310)
                      ++|+|+|++|.+|++++++|+.+ | ++++++++++++.+.++++|.+++++.+. ++.    . ..+++|++||++|  
T Consensus       151 ~~vlV~g~~g~vg~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~  228 (336)
T cd08252         151 KTLLIIGGAGGVGSIAIQLAKQL-TGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTD  228 (336)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcH
Confidence            99999998999999999999996 8 99999999999999999999988887653 221    1 1247999999987  


Q ss_pred             -ChHHHHhhcccCCEEEEEeCCCC--------CCceEEEE---e-----------cCHHHHHHHHHHHHcCCeeEEec-C
Q 021628          224 -QCDKALKAVKEGGRVVSIIGSVT--------PPASSFVL---T-----------SDGSILEKLNPYFESGKVKAIID-P  279 (310)
Q Consensus       224 -~~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~-~  279 (310)
                       ....++++++++|+++.+|....        .....+..   .           .....+.++++++.++.+.+... .
T Consensus       229 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  308 (336)
T cd08252         229 QHWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTET  308 (336)
T ss_pred             HHHHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeee
Confidence             35788999999999999975420        11111111   0           01245778999999999986421 1


Q ss_pred             CcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          280 KGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      .+.+++++++++++.+.++...+|++++
T Consensus       309 ~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         309 LGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             ecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            2468999999999999998888888764

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-32  Score=243.53  Aligned_cols=297  Identities=45%  Similarity=0.689  Sum_probs=242.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++.+ +.++++ +.+.|++.+++|+|++.++++|++|+....+.+. .....|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~   77 (326)
T cd08272           1 MKALVLESFGGP-EVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA-ARPPLPAILGCDVAGVVEAVGEGVT   77 (326)
T ss_pred             CeEEEEccCCCc-hheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Confidence            999999999887 678888 7888889999999999999999999998877653 1233577899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|++...+.+    ...|+|++|+.++...++++|+++++..++.+++.+.+||+++ +..++++|++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~  153 (326)
T cd08272          78 RFRVGDEVYGCAGGLG----GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGG  153 (326)
T ss_pred             CCCCCCEEEEccCCcC----CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753211    1358999999999999999999999999999999999999997 6789999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      ++.+|++++++++.. |.+++.++++ ++.+.++++|.+.+++.... +..      ..+++|+++|+.+.  ....+++
T Consensus       154 ~~~~g~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~  230 (326)
T cd08272         154 AGGVGHVAVQLAKAA-GARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEA  230 (326)
T ss_pred             CCcHHHHHHHHHHHc-CCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHH
Confidence            999999999999996 9999999888 88888988998887765443 221      12479999999874  4778999


Q ss_pred             cccCCEEEEEeCCCC-------CCceEEEE---ec----------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          232 VKEGGRVVSIIGSVT-------PPASSFVL---TS----------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       232 l~~~G~~v~~g~~~~-------~~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      ++++|+++.++....       .....+..   ..          ....+..+++++.++.+++.+.. +.|++++++++
T Consensus       231 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~  309 (326)
T cd08272         231 VALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDP-RTFPLEEAAAA  309 (326)
T ss_pred             hccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccc-ceecHHHHHHH
Confidence            999999998874320       11111111   00          13467788899999988754222 78999999999


Q ss_pred             HHHHHcCCCCccEEEEe
Q 021628          292 FSHLESSRATGKVVIHP  308 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~  308 (310)
                      ++.+.++...+|+++++
T Consensus       310 ~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         310 HARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHcCCcccEEEEEC
Confidence            99998888788988764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3e-33  Score=247.87  Aligned_cols=298  Identities=24%  Similarity=0.312  Sum_probs=226.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|+. +.+.++ +.|.|.+.++||+||+.++++|++|.....+... ....+|.++|||++|+|++.|  +.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~~~--~~   75 (326)
T cd08289           1 FQALVVEKDEDD-VSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK-IVKRYPFIPGIDLAGTVVESN--DP   75 (326)
T ss_pred             CeeEEEeccCCc-ceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc-ccCCCCcCcccceeEEEEEcC--CC
Confidence            999999999886 678888 8999999999999999999999999876643211 123457889999999999954  56


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHh---ccc-CCCCEEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER---SAF-SAGKSILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~---~~~-~~g~~vlI  156 (310)
                      ++++||+|++.....   +....|+|++|+.++.+.++++|+++++++++.+++++.||++++..   ... ..+++|+|
T Consensus        76 ~~~~Gd~V~~~~~~~---~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI  152 (326)
T cd08289          76 RFKPGDEVIVTSYDL---GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV  152 (326)
T ss_pred             CCCCCCEEEEccccc---CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence            799999999864211   12346999999999999999999999999999999999999988732   233 34789999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---c-cCCCccEEEeCCCC--hHHHHh
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---D-LPEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-~~~~~dvvi~~~g~--~~~~~~  230 (310)
                      +|++|.+|.+++++|+.+ |++++++++++++.+.++++|++++++.++....   . ..+++|++||++|.  ...+++
T Consensus       153 ~g~~g~vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~  231 (326)
T cd08289         153 TGATGGVGSLAVSILAKL-GYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLS  231 (326)
T ss_pred             EcCCchHHHHHHHHHHHC-CCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHH
Confidence            998899999999999996 9999999999999999999999888876542111   1 13479999999884  578999


Q ss_pred             hcccCCEEEEEeCCCC---C--------CceEEEE---ecC-HHHHHHHHHHHHcCCeeE---EecCCcccchhhHHHHH
Q 021628          231 AVKEGGRVVSIIGSVT---P--------PASSFVL---TSD-GSILEKLNPYFESGKVKA---IIDPKGPFPFSQTLEAF  292 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~---~--------~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~  292 (310)
                      +++++|+++.+|....   +        ....+..   ... .......++.+.+ .+.+   ...+.+.|+++++++|+
T Consensus       232 ~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~  310 (326)
T cd08289         232 TLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEAL  310 (326)
T ss_pred             HhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHH
Confidence            9999999999986421   1        1111111   000 1112223332222 1211   01236889999999999


Q ss_pred             HHHHcCCCCccEEEEe
Q 021628          293 SHLESSRATGKVVIHP  308 (310)
Q Consensus       293 ~~~~~~~~~~k~vi~~  308 (310)
                      +.+.+++..+|+++++
T Consensus       311 ~~~~~~~~~gkvvv~~  326 (326)
T cd08289         311 KQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHhcCcccceEEEeC
Confidence            9999999889998864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-32  Score=244.80  Aligned_cols=302  Identities=37%  Similarity=0.497  Sum_probs=243.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++...+.+ ..++++ +.+.|++.+++|+||+.++++|.+|+..+.|..+ ....+|..+|||++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~   77 (342)
T cd08266           1 MKAVVIRGHGGP-EVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG-IKLPLPHILGSDGAGVVEAVGPGVT   77 (342)
T ss_pred             CeEEEEecCCCc-cceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC-CCCCCCeecccceEEEEEEeCCCCC
Confidence            999999976665 667888 7888889999999999999999999998887543 1245688899999999999999998


Q ss_pred             CCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++.+...                  ...+....|++++|+.++.+.++++|+++++.+++.+++++.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            999999999863210                  00111236889999999999999999999999999999999999999


Q ss_pred             H-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCc
Q 021628          143 L-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKF  215 (310)
Q Consensus       143 l-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~  215 (310)
                      + +..+++++++++|+|+.+.+|++++++++.. |.+++++++++++.+.+++++.+.+++....+...      ..+++
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLF-GATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV  236 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCC
Confidence            7 5788999999999998889999999999996 99999999999999988888877777654433211      12479


Q ss_pred             cEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-C----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628          216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       216 dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (310)
                      |++++++|.  ....+++++++|+++.++..... .          ...+..  ......+..+++++.++.+++.  ++
T Consensus       237 d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~  314 (342)
T cd08266         237 DVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPV--ID  314 (342)
T ss_pred             cEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccc--ee
Confidence            999999884  57889999999999999754311 1          111111  1234578889999999988764  46


Q ss_pred             cccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          281 GPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +.|++++++++++.+.++...+|+++++
T Consensus       315 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         315 SVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             eeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            8899999999999998888788998763

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=4.2e-33  Score=248.71  Aligned_cols=295  Identities=29%  Similarity=0.412  Sum_probs=234.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++++++++    .++ +.+.|++.++||+||+.++++|++|+....+.+   ....|.++|+|++|+|+.+|+++.
T Consensus         1 ~~a~~~~~~~~l----~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~---~~~~~~~~g~~~~G~V~~~g~~v~   72 (343)
T cd08236           1 MKALVLTGPGDL----RYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG---AYHPPLVLGHEFSGTVEEVGSGVD   72 (343)
T ss_pred             CeeEEEecCCce----eEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC---CCCCCcccCcceEEEEEEECCCCC
Confidence            999999998754    888 899999999999999999999999998887754   223577899999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|++++....                  ..+....|+|++|+.+|.+.++++|+++++++++.+ ..+.+||++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            9999999998632100                  011124689999999999999999999999999887 577899999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c-CCCcc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED----L-PEKFD  216 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-~~~~d  216 (310)
                      +...+++++++|+|+| +|.+|.+++++|+.+ |.+ ++++++++++.+.++++|.+.+++.+......    . .+++|
T Consensus       152 l~~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~-G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d  229 (343)
T cd08236         152 VRLAGITLGDTVVVIG-AGTIGLLAIQWLKIL-GAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGAD  229 (343)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence            9777889999999997 799999999999996 997 88888888999999999988888765433111    1 23699


Q ss_pred             EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-------------CceEEE---Eec----CHHHHHHHHHHHHcCCe
Q 021628          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-------------PASSFV---LTS----DGSILEKLNPYFESGKV  273 (310)
Q Consensus       217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~---~~~----~~~~~~~~~~~~~~~~~  273 (310)
                      ++|||.|.   ...++++|+++|+++.+|.....             ....+.   ...    ..+.++++++++.++.+
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (343)
T cd08236         230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI  309 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence            99999863   47889999999999999744211             111111   111    14567889999999987


Q ss_pred             eEEecCCcccchhhHHHHHHHHHc-CCCCccEEE
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLES-SRATGKVVI  306 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~k~vi  306 (310)
                      .+.......+++++++++++.+.+ +...+|+++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         310 KVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            522123578999999999999988 566677764

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.3e-33  Score=245.50  Aligned_cols=283  Identities=46%  Similarity=0.634  Sum_probs=227.5

Q ss_pred             cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC--CCCCcccccceeEE---EEEeC-CCCCCCCCCCe
Q 021628           14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGV---VEKVG-SQVKKFKVGDE   87 (310)
Q Consensus        14 ~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~~g-~~~~~~~~Gd~   87 (310)
                      .....+ +.+.|.+.+++++|++.++++|+.|+.+..|.+....  ..+|.+++.++.|.   +...| ..+.....||+
T Consensus        18 ~~~~~~-~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~   96 (347)
T KOG1198|consen   18 EVLFSE-EVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDA   96 (347)
T ss_pred             ceEEee-cccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeE
Confidence            444545 8899999999999999999999999999998875432  35776666555555   34444 22344667776


Q ss_pred             eEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hhc------ccCCCCEEEEEcCC
Q 021628           88 VYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERS------AFSAGKSILVLGGA  160 (310)
Q Consensus        88 V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~------~~~~g~~vlI~g~~  160 (310)
                      +..+..         .|+|++|.++|...++++|+++++.++|++|++..|||.++ ...      +.++|++|||+|++
T Consensus        97 ~~~~~~---------~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggs  167 (347)
T KOG1198|consen   97 VVAFLS---------SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGS  167 (347)
T ss_pred             EeeccC---------CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCC
Confidence            666543         79999999999999999999999999999999999999999 567      79999999999999


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc-----CCCccEEEeCCCC--hHHHHhhcc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVK  233 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~dvvi~~~g~--~~~~~~~l~  233 (310)
                      |++|.+|+|+|+.. ++..++++.++++.++++++|+++++++++++..+.     .+++|+||||.|.  ......++.
T Consensus       168 ggVG~~aiQlAk~~-~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~  246 (347)
T KOG1198|consen  168 GGVGTAAIQLAKHA-GAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLL  246 (347)
T ss_pred             cHHHHHHHHHHHhc-CCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhc
Confidence            99999999999996 788899999999999999999999999998765443     4479999999874  467778888


Q ss_pred             cCCEEEEEeCCC---C--CCc---------------------eEEEEecCHHHHHHHHHHHHcCCeeEEecCCcccchhh
Q 021628          234 EGGRVVSIIGSV---T--PPA---------------------SSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQ  287 (310)
Q Consensus       234 ~~G~~v~~g~~~---~--~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (310)
                      ..|+...++...   .  ...                     ..+......+.++++.++++++++++.+  -+.||+++
T Consensus       247 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i--~~~~p~~~  324 (347)
T KOG1198|consen  247 KGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVI--DSVYPFSQ  324 (347)
T ss_pred             cCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCc--ceeeeHHH
Confidence            887644333211   0  100                     0011233568899999999999888864  58999999


Q ss_pred             HHHHHHHHHcCCCCccEEEEeC
Q 021628          288 TLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       288 ~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +.+|++.+.++...||++++++
T Consensus       325 ~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  325 AKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHHhhcCCcceEEEEec
Confidence            9999999999999999999876

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.7e-33  Score=248.89  Aligned_cols=299  Identities=27%  Similarity=0.334  Sum_probs=227.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.++++.   +++. +.|.|++.++||+||+.++++|++|+.++.+.. ......+|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~---~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v   76 (341)
T PRK05396          1 MKALVKLKAEPG---LWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEV   76 (341)
T ss_pred             CceEEEecCCCc---eEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCC
Confidence            999999988864   7888 899999999999999999999999998776532 11123467789999999999999999


Q ss_pred             CCCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +++++||+|++.+.-.+                  ..+...+|+|++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~  155 (341)
T PRK05396         77 TGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVH  155 (341)
T ss_pred             CcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHH
Confidence            99999999987521100                  001123689999999999999999999999888754 45555665


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEK  214 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~  214 (310)
                      ++.. ...+|++|+|.| +|.+|++++++|+.+ |+ +++++..++++.+.++++|++++++.++.++..      ..++
T Consensus       156 ~~~~-~~~~g~~vlV~~-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  232 (341)
T PRK05396        156 TALS-FDLVGEDVLITG-AGPIGIMAAAVAKHV-GARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEG  232 (341)
T ss_pred             HHHc-CCCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCC
Confidence            5532 346899999987 799999999999996 98 577777788899999999999988776544321      1357


Q ss_pred             ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEec
Q 021628          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL---TSDGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      +|+||||.|.   ....+++++++|+++.+|......          ...+..   ....+.+..+++++.++ ++....
T Consensus       233 ~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  311 (341)
T PRK05396        233 FDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPI  311 (341)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHh
Confidence            9999999873   578899999999999998643111          111111   11224456788888888 322222


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +.+.|++++++++++.+.++. .+|++++++
T Consensus       312 ~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        312 ITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             eEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            457899999999999998877 789998764

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=1.8e-32  Score=240.36  Aligned_cols=294  Identities=46%  Similarity=0.674  Sum_probs=240.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-CCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-ATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++..++.. +.++++ +.+.|.++++||+||+.++++|++|+..+.|.+. .....+|..+|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~   78 (309)
T cd05289           1 MKAVRIHEYGGP-EVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGV   78 (309)
T ss_pred             CceEEEcccCCc-cceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCC
Confidence            899999998876 667787 7888889999999999999999999998877542 1123457889999999999999999


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEc
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (310)
                      .++++||+|++....      ...|+|++|+.++...++++|++++...++.+++.+.++++++. ...+.+|++|+|+|
T Consensus        79 ~~~~~G~~V~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g  152 (309)
T cd05289          79 TGFKVGDEVFGMTPF------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHG  152 (309)
T ss_pred             CCCCCCCEEEEccCC------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence            999999999986410      12489999999999999999999999999999999999999985 56689999999999


Q ss_pred             CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc--ccCCCccEEEeCCCC--hHHHHhhccc
Q 021628          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE--DLPEKFDVVFDAVGQ--CDKALKAVKE  234 (310)
Q Consensus       159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~dvvi~~~g~--~~~~~~~l~~  234 (310)
                      +.|.+|++++++++.. |.+++++++++ +.+.++++|.+.+++....++.  ...+++|++++++|+  ...+++++++
T Consensus       153 ~~g~~g~~~~~~a~~~-g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~  230 (309)
T cd05289         153 AAGGVGSFAVQLAKAR-GARVIATASAA-NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKP  230 (309)
T ss_pred             CCchHHHHHHHHHHHc-CCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhc
Confidence            8899999999999996 99999888877 8888888998888776554433  223479999999884  5789999999


Q ss_pred             CCEEEEEeCCCCCC------ceEEE---EecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEE
Q 021628          235 GGRVVSIIGSVTPP------ASSFV---LTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVV  305 (310)
Q Consensus       235 ~G~~v~~g~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v  305 (310)
                      +|+++.+|......      ...+.   .......+.++++++.++.+.+.  +++.|++++++++++.+..+...+|++
T Consensus       231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV--VDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             CcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe--eccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            99999997543211      11111   11115678899999999998764  478999999999999998887777776


Q ss_pred             E
Q 021628          306 I  306 (310)
Q Consensus       306 i  306 (310)
                      +
T Consensus       309 ~  309 (309)
T cd05289         309 L  309 (309)
T ss_pred             C
Confidence            3

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5e-33  Score=246.38  Aligned_cols=289  Identities=33%  Similarity=0.472  Sum_probs=226.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++..++ . +.++++ +.+.|+++++||+||+.++++|++|+..+.+..   ...+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~-~-~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~~v~   74 (325)
T cd08264           1 MKALVFEKSG-I-ENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPMPHIPGAEFAGVVEEVGDHVK   74 (325)
T ss_pred             CeeEEeccCC-C-CceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC---CCCCCeecccceeEEEEEECCCCC
Confidence            9999998777 4 568888 888888999999999999999999998876421   123577899999999999999999


Q ss_pred             CCCCCCeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      .+++||+|+..+.-..                  ..+....|+|++|++++...++++|+++++++++.+++++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  154 (325)
T cd08264          75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA  154 (325)
T ss_pred             CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence            9999999987632000                  0011136899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC--cccccCCCccEEEe
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE--NIEDLPEKFDVVFD  220 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~dvvi~  220 (310)
                      +...++++|++|+|+|++|.+|++++++|+.+ |.+++++++    .+.++++|++++++.++.  ......+++|+|++
T Consensus       155 l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~-G~~v~~~~~----~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~  229 (325)
T cd08264         155 LKTAGLGPGETVVVFGASGNTGIFAVQLAKMM-GAEVIAVSR----KDWLKEFGADEVVDYDEVEEKVKEITKMADVVIN  229 (325)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeH----HHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEE
Confidence            97788999999999998899999999999996 999888763    366678998888876431  11111267999999


Q ss_pred             CCCC--hHHHHhhcccCCEEEEEeCCC-CCCceE----------EEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628          221 AVGQ--CDKALKAVKEGGRVVSIIGSV-TPPASS----------FVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPF  285 (310)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~-~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
                      ++|.  ...++++|+++|+++.+|... ....++          ...  ....++++++++++....+  .  +.+.|++
T Consensus       230 ~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~--~~~~~~~  305 (325)
T cd08264         230 SLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV--K--VWKTFKL  305 (325)
T ss_pred             CCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc--e--eEEEEcH
Confidence            9884  578999999999999998532 111110          111  0123578889999864442  2  3478999


Q ss_pred             hhHHHHHHHHHcCCCCccE
Q 021628          286 SQTLEAFSHLESSRATGKV  304 (310)
Q Consensus       286 ~~~~~a~~~~~~~~~~~k~  304 (310)
                      +++++|++.+.++...+|+
T Consensus       306 ~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         306 EEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHHHHHcCCCcccc
Confidence            9999999999887766664

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=7.3e-33  Score=244.96  Aligned_cols=287  Identities=27%  Similarity=0.404  Sum_probs=235.4

Q ss_pred             EcccCCCcc--ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628            6 YKEYGNSQS--VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK   83 (310)
Q Consensus         6 ~~~~g~~~~--~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~   83 (310)
                      ++.++.+ .  .++++ +.+.|++.+++|+||+.++++|+.|...+.+.++. ...+|.++|||++|+|+++|++++.++
T Consensus         3 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~   79 (323)
T cd05282           3 YTQFGEP-LPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS-RPPLPAVPGNEGVGVVVEVGSGVSGLL   79 (323)
T ss_pred             eCcCCCC-ccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC-CCCCCCcCCcceEEEEEEeCCCCCCCC
Confidence            3445544 3  67888 78889999999999999999999999988776532 234578899999999999999999999


Q ss_pred             CCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcc
Q 021628           84 VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGG  162 (310)
Q Consensus        84 ~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~  162 (310)
                      +||+|++...         .|+|++|+.++...++++|+++++.+++.+++.+.+||+++ +...+.+|++|+|+|+.|.
T Consensus        80 ~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~  150 (323)
T cd05282          80 VGQRVLPLGG---------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSA  150 (323)
T ss_pred             CCCEEEEeCC---------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccH
Confidence            9999999642         48999999999999999999999999999999999999998 4677899999999998899


Q ss_pred             hHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhccc
Q 021628          163 VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKE  234 (310)
Q Consensus       163 ~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~  234 (310)
                      +|++++++|+.+ |++++++++++++++.++++|++.+++.+..+...      ..+++|++|||.|+  ....++++++
T Consensus       151 vg~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~  229 (323)
T cd05282         151 VGRMLIQLAKLL-GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRP  229 (323)
T ss_pred             HHHHHHHHHHHC-CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCC
Confidence            999999999996 99999999999999999999998888776433211      13479999999874  4688999999


Q ss_pred             CCEEEEEeCCCCC-----------CceEEEEe--c------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          235 GGRVVSIIGSVTP-----------PASSFVLT--S------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       235 ~G~~v~~g~~~~~-----------~~~~~~~~--~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      +|+++.+|.....           ....+...  .      .    ...+.++++++.++.+.+.  .++.|++++++++
T Consensus       230 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a  307 (323)
T cd05282         230 GGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEA  307 (323)
T ss_pred             CCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHH
Confidence            9999998744211           12222111  0      1    2357788899999998764  4688999999999


Q ss_pred             HHHHHcCCCCccEEEE
Q 021628          292 FSHLESSRATGKVVIH  307 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~  307 (310)
                      ++.+.++...+|++++
T Consensus       308 ~~~~~~~~~~~kvv~~  323 (323)
T cd05282         308 VAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHhcCCCCceEeeC
Confidence            9999988888888763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=5e-33  Score=247.85  Aligned_cols=296  Identities=27%  Similarity=0.385  Sum_probs=228.8

Q ss_pred             EEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHh-CCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 021628            5 VYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML-GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK   83 (310)
Q Consensus         5 ~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~   83 (310)
                      ++++.++    ++++ +.+.|++.++||+||+.++++|++|+.... +.++......|.++|+|++|+|+++|+++++++
T Consensus         2 ~~~~~~~----~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~   76 (339)
T cd08232           2 VIHAAGD----LRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLA   76 (339)
T ss_pred             eeccCCc----eEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCC
Confidence            4555555    4999 899999999999999999999999988774 333212234577899999999999999999999


Q ss_pred             CCCeeEeecCccc-------------------cC----CCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           84 VGDEVYGDINEKA-------------------LD----HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        84 ~Gd~V~~~~~~~~-------------------~~----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      +||+|++.+....                   ..    .....|+|++|++++.+.++++|+++++++++. ..++.++|
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~  155 (339)
T cd08232          77 PGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVAL  155 (339)
T ss_pred             CCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHH
Confidence            9999987421000                   00    011368999999999999999999999998876 56778899


Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCcc
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFD  216 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~d  216 (310)
                      +++......++++|+|.| +|.+|++++++|+.+ |. +++++++++++.+.++++|.+++++.+..+...   ...++|
T Consensus       156 ~~l~~~~~~~~~~VLI~g-~g~vG~~~~~lak~~-G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd  233 (339)
T cd08232         156 HAVNRAGDLAGKRVLVTG-AGPIGALVVAAARRA-GAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFD  233 (339)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCcc
Confidence            998544333999999987 799999999999996 98 788888888888888999998888776543211   123699


Q ss_pred             EEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE-ecCHHHHHHHHHHHHcCCeeEEecCCcc
Q 021628          217 VVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL-TSDGSILEKLNPYFESGKVKAIIDPKGP  282 (310)
Q Consensus       217 vvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (310)
                      +++|+.|.   .+..+++|+++|+++.++.....          ....+.. ......++++++++.++.+++...+.+.
T Consensus       234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  313 (339)
T cd08232         234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV  313 (339)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence            99999873   47899999999999999754311          1111111 1234568889999999988754334578


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      |++++++++++.+.++...+|+++++
T Consensus       314 ~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         314 FPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            99999999999998888888999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=2.7e-32  Score=241.57  Aligned_cols=296  Identities=24%  Similarity=0.302  Sum_probs=234.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|.+ +.++++ +.|.|+++++||+||+.++++|++|.....|.++. ...+|.++|||++|+|+.  ++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~V~~--~~~~   75 (324)
T cd08288           1 FKALVLEKDDGG-TSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI-VRTFPLVPGIDLAGTVVE--SSSP   75 (324)
T ss_pred             CeeEEEeccCCC-cceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc-cCCCCCccccceEEEEEe--CCCC
Confidence            999999999976 668999 89999999999999999999999999988776521 123577899999999998  6777


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH---hcccC-CCCEEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFS-AGKSILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~-~g~~vlI  156 (310)
                      .+++||+|++....   .+....|+|++|++++.+.++++|++++.++++.+++++++++.++.   ..... ++++|+|
T Consensus        76 ~~~~Gd~V~~~~~~---~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI  152 (324)
T cd08288          76 RFKPGDRVVLTGWG---VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV  152 (324)
T ss_pred             CCCCCCEEEECCcc---CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE
Confidence            89999999985310   00112589999999999999999999999999999999999987763   34445 6789999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhh
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|.+|++++++|+.+ |+++++++.++++.+.++++|+++++++++....   ....++|.++|+++.  ....+.+
T Consensus       153 ~ga~g~vg~~~~~~A~~~-G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  231 (324)
T cd08288         153 TGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQ  231 (324)
T ss_pred             ECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHH
Confidence            998899999999999996 9999999999999999999999998887643321   112368899999985  4677788


Q ss_pred             cccCCEEEEEeCCCC-----------CCceEEEE----e----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHH
Q 021628          232 VKEGGRVVSIIGSVT-----------PPASSFVL----T----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAF  292 (310)
Q Consensus       232 l~~~G~~v~~g~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  292 (310)
                      ++.+|+++.+|....           .....+..    .    ...+.+..+++++.++.+.+.   .+.++++++++++
T Consensus       232 ~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~a~  308 (324)
T cd08288         232 TRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEAL---TREIPLADVPDAA  308 (324)
T ss_pred             hcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcccc---ceeecHHHHHHHH
Confidence            899999999875321           11111111    0    012356677778888877642   5789999999999


Q ss_pred             HHHHcCCCCccEEEEe
Q 021628          293 SHLESSRATGKVVIHP  308 (310)
Q Consensus       293 ~~~~~~~~~~k~vi~~  308 (310)
                      +.+.+++..+|+++++
T Consensus       309 ~~~~~~~~~~~vvv~~  324 (324)
T cd08288         309 EAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHhcCCccCeEEEeC
Confidence            9999999889998864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-32  Score=243.42  Aligned_cols=288  Identities=31%  Similarity=0.472  Sum_probs=237.4

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ||+++...+.+ ..++++ +.+.|.+.+++|+||+.++++|++|+..+.|.++.. ..+|.++|||++|+|+.+|+++..
T Consensus         2 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~   78 (331)
T cd08273           2 REVVVTRRGGP-EVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTG   78 (331)
T ss_pred             eeEEEccCCCc-ccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCcc
Confidence            89999999987 789999 899999999999999999999999999888765322 246889999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~  160 (310)
                      +++||+|++...         .|+|++|+.++...++++|++++..+++.+++++.+||+++ +...+++|++|+|+|+.
T Consensus        79 ~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  149 (331)
T cd08273          79 FEVGDRVAALTR---------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS  149 (331)
T ss_pred             CCCCCEEEEeCC---------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence            999999999742         48999999999999999999999999999999999999998 45789999999999988


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---ccCCCccEEEeCCCC--hHHHHhhcccC
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---DLPEKFDVVFDAVGQ--CDKALKAVKEG  235 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~dvvi~~~g~--~~~~~~~l~~~  235 (310)
                      |.+|++++++|+.. |++++.++. +++.+.++++|...+ +.+..++.   ...+++|++++++|.  ...++++++++
T Consensus       150 g~ig~~~~~~a~~~-g~~v~~~~~-~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~  226 (331)
T cd08273         150 GGVGQALLELALLA-GAEVYGTAS-ERNHAALRELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPG  226 (331)
T ss_pred             cHHHHHHHHHHHHc-CCEEEEEeC-HHHHHHHHHcCCeEE-cCCCcchhhhhccCCCceEEEECCchHHHHHHHHHhcCC
Confidence            99999999999996 999988887 888888888986543 33322211   123479999999874  57889999999


Q ss_pred             CEEEEEeCCCCCCc-------------------e-------EE-EEec--------CHHHHHHHHHHHHcCCeeEEecCC
Q 021628          236 GRVVSIIGSVTPPA-------------------S-------SF-VLTS--------DGSILEKLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       236 G~~v~~g~~~~~~~-------------------~-------~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  280 (310)
                      |+++.+|.......                   .       .+ ....        ..+.+.++++++.++.+++.  .+
T Consensus       227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~  304 (331)
T cd08273         227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IA  304 (331)
T ss_pred             CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cc
Confidence            99999986431110                   0       00 0000        12567889999999998763  46


Q ss_pred             cccchhhHHHHHHHHHcCCCCccEEE
Q 021628          281 GPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       281 ~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      +.|++++++++++.+.++...+|+++
T Consensus       305 ~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         305 KRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             eEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            78999999999999988888888775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=9.2e-33  Score=246.32  Aligned_cols=299  Identities=29%  Similarity=0.359  Sum_probs=230.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||+++++..|..   +++. +.+.|+++++||+||+.++++|++|+..+.+.. ......+|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v   76 (341)
T cd05281           1 MKAIVKTKAGPG---AELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGV   76 (341)
T ss_pred             CcceEEecCCCc---eEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCC
Confidence            999999987753   7888 899999999999999999999999988765421 11123456789999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +.+++||+|++.....                  .+.+....|+|++|++++.+.++++|++++.+.+ .++..+.++++
T Consensus        77 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~  155 (341)
T cd05281          77 TRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVH  155 (341)
T ss_pred             CCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHH
Confidence            9999999998852100                  0001123689999999999999999999998544 56667778888


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccc-----ccCCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIE-----DLPEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~  215 (310)
                      ++. ...++|++|+|.| +|.+|++++++|+.. |. +++++.+++++.+.++++|.+++++.+..++.     ...+++
T Consensus       156 ~~~-~~~~~g~~vlV~g-~g~vg~~~~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v  232 (341)
T cd05281         156 TVL-AGDVSGKSVLITG-CGPIGLMAIAVAKAA-GASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGV  232 (341)
T ss_pred             HHH-hcCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCC
Confidence            775 4557999999987 799999999999996 88 68888778889998899999888876544332     112479


Q ss_pred             cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEec
Q 021628          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL---TSDGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      |++||++|.   ....+++|+++|+++.+|......           ...+..   ....+.+.++++++.++.+.+...
T Consensus       233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  312 (341)
T cd05281         233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV  312 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence            999999873   478899999999999987543111           111111   112355778999999999864333


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +...+++++++++++.+.++. .+|+++++
T Consensus       313 ~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         313 ITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             eEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            457789999999999999888 88998764

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.5e-32  Score=240.77  Aligned_cols=291  Identities=37%  Similarity=0.547  Sum_probs=238.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+.+.+ ..++++ +.+.|.+.+++|+||+.++++|++|+....+.++ ....+|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~   77 (323)
T cd05276           1 MKAIVIKEPGGP-EVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP-PPPGASDILGLEVAGVVVAVGPGVT   77 (323)
T ss_pred             CeEEEEecCCCc-ccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC-CCCCCCCcccceeEEEEEeeCCCCC
Confidence            999999998876 777888 8888889999999999999999999998877653 2234678899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|++...         .|+|++|+.++...++++|+++++.+++.++..+.++++++ +...+.++++|+|+|+
T Consensus        78 ~~~~Gd~V~~~~~---------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~  148 (323)
T cd05276          78 GWKVGDRVCALLA---------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG  148 (323)
T ss_pred             CCCCCCEEEEecC---------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998642         48999999999999999999999999999999999999998 4678999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      .+.+|++++++++.. |++++++++++++.+.+++++.+.+++....+...      ..+++|+++++.|.  ....+++
T Consensus       149 ~~~ig~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~  227 (323)
T cd05276         149 ASGVGTAAIQLAKAL-GARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRA  227 (323)
T ss_pred             cChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence            899999999999996 99999999999999999889988887765433211      12479999999884  4778899


Q ss_pred             cccCCEEEEEeCCCCC-----------CceEEEE---ec---------CHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          232 VKEGGRVVSIIGSVTP-----------PASSFVL---TS---------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      ++++|+++.++.....           ....+..   ..         ....+.++++++.++.+.+.  .++.|+++++
T Consensus       228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  305 (323)
T cd05276         228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEA  305 (323)
T ss_pred             hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHH
Confidence            9999999998754210           1111111   00         01235678888888888653  4688999999


Q ss_pred             HHHHHHHHcCCCCccEEE
Q 021628          289 LEAFSHLESSRATGKVVI  306 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi  306 (310)
                      +++++.+.++...+|+++
T Consensus       306 ~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         306 AEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHhCCCcceEeC
Confidence            999999988877778763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.1e-32  Score=246.10  Aligned_cols=296  Identities=26%  Similarity=0.347  Sum_probs=228.8

Q ss_pred             EEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhC-CCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            3 AWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         3 a~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ++++..++.    ++++ +.+.|.+.++||+||+.++++|++|++.+.+ ..+.....+|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~----~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~   75 (343)
T cd05285           1 AAVLHGPGD----LRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTH   75 (343)
T ss_pred             CceEecCCc----eeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCC
Confidence            356666654    5888 8999999999999999999999999887643 221112245778999999999999999999


Q ss_pred             CCCCCeeEeecCc------------cc------c-CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           82 FKVGDEVYGDINE------------KA------L-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        82 ~~~Gd~V~~~~~~------------~~------~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      +++||+|++.+..            ..      . ......|+|++|++++.+.++++|+++++++++.+ ..+.+|+++
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  154 (343)
T cd05285          76 LKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHA  154 (343)
T ss_pred             CCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHH
Confidence            9999999863110            00      0 00113689999999999999999999999998876 577889998


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcc---c----cc--C
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENI---E----DL--P  212 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~----~~--~  212 (310)
                      +..+++++|++|+|.| +|.+|++++++|+.+ |.+ ++++++++++.+.++++|.+.+++.++.+.   .    ..  .
T Consensus       155 ~~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~-G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~  232 (343)
T cd05285         155 CRRAGVRPGDTVLVFG-AGPIGLLTAAVAKAF-GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGG  232 (343)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCC
Confidence            8889999999999987 799999999999996 988 888888999999999999999887765442   1    11  2


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE-ecCHHHHHHHHHHHHcCCeeEEec
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL-TSDGSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  278 (310)
                      +++|++|||.|.   ....+++++++|+++.+|......          .+.+.. ......+..+++++.++.+.+...
T Consensus       233 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  312 (343)
T cd05285         233 KGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPL  312 (343)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHh
Confidence            469999999874   478899999999999987433211          111111 112367888999999998753222


Q ss_pred             CCcccchhhHHHHHHHHHcCC-CCccEEE
Q 021628          279 PKGPFPFSQTLEAFSHLESSR-ATGKVVI  306 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~-~~~k~vi  306 (310)
                      ..+.|++++++++++.+.++. ..+|++|
T Consensus       313 ~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         313 ITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            356899999999999998875 4578887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=5.5e-32  Score=242.36  Aligned_cols=297  Identities=34%  Similarity=0.521  Sum_probs=228.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCC-CCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      +|++++.+++++ ..++.. +.|.|+ +.+++|+||+.++++|++|+..+.+... .....|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~-~~~~~~~~~g~e~~G~V~~vG~~v   77 (352)
T cd08247           1 YKALTFKNNTSP-LTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF-HFKVKEKGLGRDYSGVIVKVGSNV   77 (352)
T ss_pred             CceEEEecCCCc-ceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc-ccccCCCccCceeEEEEEEeCccc
Confidence            589999999987 444444 445554 4999999999999999999987754321 111237789999999999999999


Q ss_pred             C-CCCCCCeeEeecCccccCCCCCCCcceeEEEEecC----ccccCCCCCChhhhccccchHHHHHHHHH-hc-ccCCCC
Q 021628           80 K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN----LLALKPKNLSFVEAASLPLATETAYEGLE-RS-AFSAGK  152 (310)
Q Consensus        80 ~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~-~~~~g~  152 (310)
                      + .+++||+|++...+.+    ...|+|++|++++..    .++++|+++++.+++.+++++.|||+++. .. ++++|+
T Consensus        78 ~~~~~~Gd~V~~~~~~~~----~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~  153 (352)
T cd08247          78 ASEWKVGDEVCGIYPHPY----GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDS  153 (352)
T ss_pred             ccCCCCCCEEEEeecCCC----CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCC
Confidence            8 8999999998753221    136899999999987    78999999999999999999999999985 45 799999


Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCc---c-c----cc--CCCccEEEeC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKEN---I-E----DL--PEKFDVVFDA  221 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~-~----~~--~~~~dvvi~~  221 (310)
                      +|+|+|+++.+|++++++|+.+++. .++.+ .++++.+.++++|++.+++.++.+   + .    ..  .+++|++|||
T Consensus       154 ~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~  232 (352)
T cd08247         154 KVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC  232 (352)
T ss_pred             eEEEECCCchHHHHHHHHHHhcCCcceEEEE-eChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEEC
Confidence            9999998899999999999985344 45555 455556677889998888765433   1 1    11  3589999999


Q ss_pred             CCC---hHHHHhhcc---cCCEEEEEeCCC----CC-------------C----ceEE-----E---EecCHHHHHHHHH
Q 021628          222 VGQ---CDKALKAVK---EGGRVVSIIGSV----TP-------------P----ASSF-----V---LTSDGSILEKLNP  266 (310)
Q Consensus       222 ~g~---~~~~~~~l~---~~G~~v~~g~~~----~~-------------~----~~~~-----~---~~~~~~~~~~~~~  266 (310)
                      .|.   ...++++++   ++|+++.+++..    ..             .    ...+     .   .......+..+++
T Consensus       233 ~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (352)
T cd08247         233 VGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAE  312 (352)
T ss_pred             CCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHH
Confidence            874   367889999   999999875321    00             0    0000     0   0011356788999


Q ss_pred             HHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ++.++.+++.  ..+.|++++++++++.+.+++..+|++++
T Consensus       313 ~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         313 LIADGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             HHhCCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            9999998764  46889999999999999998888999886

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=5.1e-32  Score=239.10  Aligned_cols=298  Identities=34%  Similarity=0.543  Sum_probs=242.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++..++.+ ..+++. +.|.|.+.+++|+|++.++++|++|+....|.++. ....|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~   77 (325)
T cd08253           1 MRAIRYHEFGAP-DVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG-LPPLPYVPGSDGAGVVEAVGEGVD   77 (325)
T ss_pred             CceEEEcccCCc-ccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC-CCCCCeecccceEEEEEeeCCCCC
Confidence            899999988765 667888 89999999999999999999999999888776532 235688899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                      ++++||+|++...+.+    ...|++++|+.++...++++|++++..+++.+++++.+||+++. ..++.+|++++|+|+
T Consensus        78 ~~~~Gd~v~~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~  153 (325)
T cd08253          78 GLKVGDRVWLTNLGWG----RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGG  153 (325)
T ss_pred             CCCCCCEEEEeccccC----CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcC
Confidence            9999999998753211    13689999999999999999999999999999999999999984 588999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      ++.+|++++++++.. |++++++++++++.+.+.++|.+.+++.+..+...      ..+++|+++++++.  ....+++
T Consensus       154 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (325)
T cd08253         154 SGAVGHAAVQLARWA-GARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV  232 (325)
T ss_pred             CchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence            999999999999996 99999999999999999889988888765543211      13479999999874  4778899


Q ss_pred             cccCCEEEEEeCCCC----------CCceEEEEe----cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628          232 VKEGGRVVSIIGSVT----------PPASSFVLT----SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS  293 (310)
Q Consensus       232 l~~~G~~v~~g~~~~----------~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  293 (310)
                      ++++|+++.++....          .....+...    ..    ...+..+.+++.++.+++.  .++.|++++++++++
T Consensus       233 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~  310 (325)
T cd08253         233 LAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHE  310 (325)
T ss_pred             hCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHH
Confidence            999999999975321          111112111    11    2345666778888887653  468899999999999


Q ss_pred             HHHcCCCCccEEEEe
Q 021628          294 HLESSRATGKVVIHP  308 (310)
Q Consensus       294 ~~~~~~~~~k~vi~~  308 (310)
                      .+.++...+|+++++
T Consensus       311 ~~~~~~~~~kvv~~~  325 (325)
T cd08253         311 AVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHcCCCcceEEEeC
Confidence            999888888988753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=7.5e-32  Score=239.36  Aligned_cols=294  Identities=31%  Similarity=0.434  Sum_probs=236.1

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |++++.++|..   ++++ +.|.|.+.+++|+|++.++++|++|+....+.++  ...+|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~---~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~   74 (330)
T cd08245           1 KAAVVHAAGGP---LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG--GSKYPLVPGHEIVGEVVEVGAGVEG   74 (330)
T ss_pred             CeEEEecCCCC---ceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC--CCCCCcccCccceEEEEEECCCCcc
Confidence            78999988543   6888 8999999999999999999999999999888663  2346788999999999999999999


Q ss_pred             CCCCCeeEeec-----Cc--------cc------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           82 FKVGDEVYGDI-----NE--------KA------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        82 ~~~Gd~V~~~~-----~~--------~~------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      +++||+|+...     ..        ..      ..+....|+|++|+.++...++++|+++++.+++.+++.+.+||++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            99999997421     00        00      0011236899999999999999999999999999999999999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-ccCCCccEEEeC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-DLPEKFDVVFDA  221 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~dvvi~~  221 (310)
                      +...+++++++|+|+| +|.+|++++++|+.+ |.+++++++++++.+.++++|.+.+++....... ...+++|+++++
T Consensus       155 l~~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~-G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LRDAGPRPGERVAVLG-IGGLGHLAVQYARAM-GFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HHhhCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            9668899999999997 677999999999996 9999999999999999998998887765443221 123479999999


Q ss_pred             CCC---hHHHHhhcccCCEEEEEeCCCCCC----ceEE-------E--EecCHHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628          222 VGQ---CDKALKAVKEGGRVVSIIGSVTPP----ASSF-------V--LTSDGSILEKLNPYFESGKVKAIIDPKGPFPF  285 (310)
Q Consensus       222 ~g~---~~~~~~~l~~~G~~v~~g~~~~~~----~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
                      +++   ...++++++++|+++.++......    ...+       .  .......++.+++++.++.+.+.   .+.|++
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~  309 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPM---IETFPL  309 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcce---EEEEcH
Confidence            763   478899999999999997542110    0001       0  01134678889999999988752   367999


Q ss_pred             hhHHHHHHHHHcCCCCccEEE
Q 021628          286 SQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       286 ~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      ++++++++.+.++...+|+++
T Consensus       310 ~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         310 DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHHcCCCCcceeC
Confidence            999999999999888888764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.8e-31  Score=235.02  Aligned_cols=290  Identities=34%  Similarity=0.447  Sum_probs=238.7

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      ||+.+...+.. ..+.+. +.+.+++.++||+|++.++++|++|+....+.++   ..+|.++|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~---~~~~~~~g~e~~G~v~~~g~~~~~   75 (320)
T cd05286           1 KAVRIHKTGGP-EVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP---LPLPFVLGVEGAGVVEAVGPGVTG   75 (320)
T ss_pred             CeEEEecCCCc-cceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC---CCCCccCCcceeEEEEEECCCCCC
Confidence            57788777776 667887 7777788999999999999999999998887653   245778999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~  160 (310)
                      +++||+|+++.         ..|++++|+.++.+.++++|++++..+++.+++...++++++ +..++.+|++|+|+|++
T Consensus        76 ~~~G~~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~  146 (320)
T cd05286          76 FKVGDRVAYAG---------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAA  146 (320)
T ss_pred             CCCCCEEEEec---------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            99999999863         148999999999999999999999999999999999999998 46889999999999999


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      |.+|++++++++.+ |++++++++++++.+.++++|.+++++....++..      ..+++|++++|.+.  ...+++++
T Consensus       147 g~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l  225 (320)
T cd05286         147 GGVGLLLTQWAKAL-GATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL  225 (320)
T ss_pred             chHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence            99999999999996 99999999999999999999998888765433211      13479999999874  57889999


Q ss_pred             ccCCEEEEEeCCCC-----------CCceEEEEe------cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          233 KEGGRVVSIIGSVT-----------PPASSFVLT------SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       233 ~~~G~~v~~g~~~~-----------~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      +++|+++.+|....           .....+...      ..    ...+.++++++.++.+.+.  .++.|++++++++
T Consensus       226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a  303 (320)
T cd05286         226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQA  303 (320)
T ss_pred             ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHH
Confidence            99999999975431           112222110      11    1335678889999988764  4678999999999


Q ss_pred             HHHHHcCCCCccEEEEe
Q 021628          292 FSHLESSRATGKVVIHP  308 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~  308 (310)
                      ++.+.++...+|+++++
T Consensus       304 ~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         304 HRDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999888888888753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.9e-31  Score=234.72  Aligned_cols=294  Identities=37%  Similarity=0.557  Sum_probs=237.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++.. +.++++ +.|.|++.+++|+||+.++++|++|+....+...  ...+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   76 (325)
T cd08271           1 MKAWVLPKPGAA-LQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPP--AWSYPHVPGVDGAGVVVAVGAKVT   76 (325)
T ss_pred             CeeEEEccCCCc-ceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCcccccceEEEEEEeCCCCC
Confidence            999999999942 347999 8999999999999999999999999988877542  123467899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|++...      ....|+|++|+.++...++++|++++..+++.+++.+.++++++ +.+.+++|++++|+|+
T Consensus        77 ~~~~Gd~V~~~~~------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~  150 (325)
T cd08271          77 GWKVGDRVAYHAS------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG  150 (325)
T ss_pred             cCCCCCEEEeccC------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECC
Confidence            9999999998641      01258999999999999999999999999999999999999998 5688999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      .+.+|++++++++.. |++++++. ++++.+.+.++|.+.+++....+...      ..+++|++++++++  ....+++
T Consensus       151 ~~~ig~~~~~~a~~~-g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  228 (325)
T cd08271         151 AGGVGSFAVQLAKRA-GLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT  228 (325)
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence            899999999999996 99988877 66778888889988887765433221      13479999999874  4678999


Q ss_pred             cccCCEEEEEeCCCCC-------CceEEE---Ee------------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          232 VKEGGRVVSIIGSVTP-------PASSFV---LT------------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-------~~~~~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      ++++|+++.++.....       ....+.   ..            ...+.+.++++++.++.+.+.  .++.|+++++.
T Consensus       229 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~  306 (325)
T cd08271         229 LAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLP  306 (325)
T ss_pred             hccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHH
Confidence            9999999988643211       111111   00            011345678899999998764  46889999999


Q ss_pred             HHHHHHHcCCCCccEEEEe
Q 021628          290 EAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++.+.++...+|+++++
T Consensus       307 ~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         307 EALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHcCCccceEEEEC
Confidence            9999999888888988753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7e-32  Score=244.19  Aligned_cols=286  Identities=29%  Similarity=0.383  Sum_probs=220.2

Q ss_pred             eEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCC-----CCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEe
Q 021628           16 LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFS-----ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG   90 (310)
Q Consensus        16 l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~-----~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~   90 (310)
                      ++++ +.|.|+++++||+||+.++++|++|++.+.+...     .....+|.++|||++|+|+++|++++.+++||+|++
T Consensus        39 ~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          39 LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             EEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            6889 8999999999999999999999999988863210     012356789999999999999999999999999986


Q ss_pred             ecCccc------------------cCCCCCCCcceeEEEEecCccccCCCC-------CChhhhccccchHHHHHHHH-H
Q 021628           91 DINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKN-------LSFVEAASLPLATETAYEGL-E  144 (310)
Q Consensus        91 ~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~-------~~~~~aa~~~~~~~ta~~al-~  144 (310)
                      .+....                  ..+....|+|++|+.++...++++|++       ++.+ +++++..+++||+++ .
T Consensus       118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~  196 (384)
T cd08265         118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI  196 (384)
T ss_pred             CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence            321100                  001123689999999999999999986       3444 556677888999998 4


Q ss_pred             h-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCC---cccc----c--CC
Q 021628          145 R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKE---NIED----L--PE  213 (310)
Q Consensus       145 ~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~----~--~~  213 (310)
                      . .++++|++|+|+| +|.+|++++++|+.+ |+ +++++++++++.+.++++|++++++.++.   ++..    .  .+
T Consensus       197 ~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~-G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~  274 (384)
T cd08265         197 RGGGFRPGAYVVVYG-AGPIGLAAIALAKAA-GASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGW  274 (384)
T ss_pred             hcCCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCC
Confidence            4 7899999999997 799999999999996 88 68888888889999999999888876532   2211    1  24


Q ss_pred             CccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEE
Q 021628          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL---TSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       214 ~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ++|+|+|+.|.    ...++++|+++|+++.+|......          ...+..   ......+.++++++.++.+++.
T Consensus       275 gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~  354 (384)
T cd08265         275 GADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMT  354 (384)
T ss_pred             CCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChH
Confidence            79999999884    378899999999999997542111          001111   0123468899999999998764


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      ...++.|+++++++|++.+.++ ..+|+++
T Consensus       355 ~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         355 KIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            3356789999999999997654 5677765

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.7e-31  Score=240.26  Aligned_cols=298  Identities=25%  Similarity=0.304  Sum_probs=222.5

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      +++++..+..    ++++ +.+.|++.++||+||+.++++|++|++.+.+.... ....+|.++|||++|+|+++|++++
T Consensus        19 ~~~~~~~~~~----l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
T PLN02702         19 MAAWLVGVNT----LKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK   93 (364)
T ss_pred             ceEEEecCCc----eEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence            4444554443    5888 88888899999999999999999999988763211 1123577899999999999999999


Q ss_pred             CCCCCCeeEeecCccc-------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINEKA-------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      .+++||+|++.+.-..                   .......|+|++|+.++...++++|+++++.+++.. ..+.++++
T Consensus        94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~  172 (364)
T PLN02702         94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH  172 (364)
T ss_pred             CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence            9999999987421100                   000112689999999999999999999999888763 23344788


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCC--CCcccc--------
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT--KENIED--------  210 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~--------  210 (310)
                      ++...++.+|++|+|+| +|++|++++++|+.+ |++ ++++++++++.+.++++|++.+++..  ..++..        
T Consensus       173 ~~~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  250 (364)
T PLN02702        173 ACRRANIGPETNVLVMG-AGPIGLVTMLAARAF-GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKA  250 (364)
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhh
Confidence            88778889999999997 799999999999996 986 55666788889988999998876543  222211        


Q ss_pred             cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE-ecCHHHHHHHHHHHHcCCeeEE
Q 021628          211 LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL-TSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       211 ~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      ..+++|++||+.|.   ...++++++++|+++.+|.....          ....... ......+..+++++.++.+.+.
T Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  330 (364)
T PLN02702        251 MGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVK  330 (364)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCch
Confidence            12479999999873   58999999999999999853211          0111111 1123567889999999988643


Q ss_pred             ecCCcccc--hhhHHHHHHHHHcCCCCccEEEE
Q 021628          277 IDPKGPFP--FSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       277 ~~~~~~~~--~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                      ..+.+.|+  ++++++|++.+.+++..+|+++.
T Consensus       331 ~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        331 PLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            22456644  58999999999888877898874

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.3e-32  Score=236.76  Aligned_cols=277  Identities=27%  Similarity=0.290  Sum_probs=220.8

Q ss_pred             ceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHH-hCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecC
Q 021628           15 VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN   93 (310)
Q Consensus        15 ~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~   93 (310)
                      .++++ +++.|++.++||+||+.++++|++|+..+ .|..+...+..|.++|+|++|+|+.+|++++++++||+|++.. 
T Consensus         6 ~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-   83 (312)
T cd08269           6 RFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-   83 (312)
T ss_pred             eeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence            36888 89999999999999999999999999887 6654222223478899999999999999999999999999864 


Q ss_pred             ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHh
Q 021628           94 EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH  173 (310)
Q Consensus        94 ~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~  173 (310)
                               .|+|++|++++.+.++++|+++.  .++....++.++++++...+++++++|+|+| +|.+|.+++++|+.
T Consensus        84 ---------~g~~~~~~~v~~~~~~~lP~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~la~~  151 (312)
T cd08269          84 ---------GGAFAEYDLADADHAVPLPSLLD--GQAFPGEPLGCALNVFRRGWIRAGKTVAVIG-AGFIGLLFLQLAAA  151 (312)
T ss_pred             ---------CCcceeeEEEchhheEECCCchh--hhHHhhhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHH
Confidence                     48999999999999999999982  2222236778899988888899999999997 79999999999999


Q ss_pred             hcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeC
Q 021628          174 VFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       174 ~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~  243 (310)
                      + |++ ++++.+++++.+.++++|++.+++.+...+..      ...++|+++||.|.   ...++++++++|+++.+|.
T Consensus       152 ~-g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~  230 (312)
T cd08269         152 A-GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGY  230 (312)
T ss_pred             c-CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEcc
Confidence            6 998 88888898899988999998887754433211      12479999999863   4788999999999999975


Q ss_pred             CCC-CC----------ceEEEEe------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCC-CccEE
Q 021628          244 SVT-PP----------ASSFVLT------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA-TGKVV  305 (310)
Q Consensus       244 ~~~-~~----------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~k~v  305 (310)
                      ... +.          ...+...      ...+.++++++++.++.+.+.....+.|++++++++++.+.+++. .+|.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~  310 (312)
T cd08269         231 HQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV  310 (312)
T ss_pred             CCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEE
Confidence            421 10          1111111      113678899999999998864334578999999999999988864 56877


Q ss_pred             E
Q 021628          306 I  306 (310)
Q Consensus       306 i  306 (310)
                      +
T Consensus       311 ~  311 (312)
T cd08269         311 I  311 (312)
T ss_pred             e
Confidence            5

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.1e-30  Score=230.57  Aligned_cols=292  Identities=34%  Similarity=0.510  Sum_probs=238.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++.+.+.+.+ ..++++ +.+.+.+++++|+||+.++++|++|+....+.++. +..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~vg~~~~   77 (325)
T TIGR02824         1 MKAIEITEPGGP-EVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP-PPGASDILGLEVAGEVVAVGEGVS   77 (325)
T ss_pred             CceEEEccCCCc-ccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCCCccceeEEEEEEeCCCCC
Confidence            899999988877 677887 77777789999999999999999999988776532 234578899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      ++++||+|++...         .|++++|+.++...++++|+++++..++.+++++.++++++ +...++++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~  148 (325)
T TIGR02824        78 RWKVGDRVCALVA---------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGG  148 (325)
T ss_pred             CCCCCCEEEEccC---------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998642         48999999999999999999999999999999999999987 6789999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      ++.+|++++++++.. |++++++.+++++.+.++++|.+.+++....++..      ..+++|++++++|.  ....+++
T Consensus       149 ~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  227 (325)
T TIGR02824       149 ASGIGTTAIQLAKAF-GARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA  227 (325)
T ss_pred             cchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence            999999999999996 99999999999998888889887776654332211      12479999999874  4788999


Q ss_pred             cccCCEEEEEeCCCC-----------CCceEEEEe---c--C-------HHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          232 VKEGGRVVSIIGSVT-----------PPASSFVLT---S--D-------GSILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       232 l~~~G~~v~~g~~~~-----------~~~~~~~~~---~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      ++++|+++.++....           ..+..+...   .  .       ...+.+++++++++.+.+.  .++.|+++++
T Consensus       228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~  305 (325)
T TIGR02824       228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDA  305 (325)
T ss_pred             hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHH
Confidence            999999999975421           111111110   1  0       1234667888988888653  4688999999


Q ss_pred             HHHHHHHHcCCCCccEEEE
Q 021628          289 LEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++.+.++...+|++++
T Consensus       306 ~~~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       306 AQAHALMESGDHIGKIVLT  324 (325)
T ss_pred             HHHHHHHHhCCCcceEEEe
Confidence            9999999888888888875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=8.9e-31  Score=232.31  Aligned_cols=287  Identities=28%  Similarity=0.333  Sum_probs=227.0

Q ss_pred             EEEEEcccCC---CccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCC
Q 021628            2 KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         2 ka~~~~~~g~---~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |+|++++.++   ..+.++++ +.|.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             cEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            6888887763   22778999 89999999999999999999999887655543210 1122356789999999999996


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEec-CccccCCCCCC--hhhhcc-ccchHHHHHHHH-HhcccCCCC
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE-NLLALKPKNLS--FVEAAS-LPLATETAYEGL-ERSAFSAGK  152 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al-~~~~~~~g~  152 (310)
                      +  ++++||+|+++            ++|++|+.++. ..++++|++++  ...++. +++++.+||+++ ....+.+++
T Consensus        82 ~--~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~  147 (329)
T cd05288          82 P--DFKVGDLVSGF------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGE  147 (329)
T ss_pred             C--CCCCCCEEecc------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCC
Confidence            4  79999999884            58999999999 99999999985  445555 888999999998 467889999


Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--  224 (310)
                      +|+|+|++|.+|++++++|+.. |++++++++++++.+.+++ +|++.+++.++.++..     ..+++|++|||+|.  
T Consensus       148 ~vlI~g~~g~ig~~~~~~a~~~-G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~  226 (329)
T cd05288         148 TVVVSAAAGAVGSVVGQIAKLL-GARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEI  226 (329)
T ss_pred             EEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHH
Confidence            9999999999999999999996 9999999999999999987 9998888876543211     13579999999984  


Q ss_pred             hHHHHhhcccCCEEEEEeCCCCCC----------------ceEEEEe---cC----HHHHHHHHHHHHcCCeeEEecCCc
Q 021628          225 CDKALKAVKEGGRVVSIIGSVTPP----------------ASSFVLT---SD----GSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~~~----------------~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                      ...++++++++|+++.+|......                ...+...   ..    .+.+.++++++.++.+++..  ..
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~  304 (329)
T cd05288         227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DV  304 (329)
T ss_pred             HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cc
Confidence            578899999999999997542110                1111111   11    24577888999999988652  45


Q ss_pred             ccchhhHHHHHHHHHcCCCCccEEE
Q 021628          282 PFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       282 ~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      .+++++++++++.+.+++..+|+++
T Consensus       305 ~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         305 VEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             cccHHHHHHHHHHHhcCCCccceeC
Confidence            6899999999999988887778764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-30  Score=230.53  Aligned_cols=290  Identities=43%  Similarity=0.666  Sum_probs=229.5

Q ss_pred             EEcccCCCccce--EEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 021628            5 VYKEYGNSQSVL--KFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT-DSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         5 ~~~~~g~~~~~l--~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      +|...+++ +++  +++ +.+.|++.++||+|++.++++|++|++.+.|.++.. ...+|..+|||++|+|+++|+++.+
T Consensus         2 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   79 (319)
T cd08267           2 VYTRYGSP-EVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTR   79 (319)
T ss_pred             eeCCCCCh-hhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCC
Confidence            45556665 444  778 889999999999999999999999999887754210 1234678999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~  160 (310)
                      +.+||+|++....      ...|+|++|..++.+.++++|++++..+++.+++.+.+||+++. ..++++|++|+|+|++
T Consensus        80 ~~~Gd~V~~~~~~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~  153 (319)
T cd08267          80 FKVGDEVFGRLPP------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGAS  153 (319)
T ss_pred             CCCCCEEEEeccC------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence            9999999986420      12489999999999999999999999999999999999999984 5679999999999988


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---cccCCCccEEEeCCCC----hHHHHhhcc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAVGQ----CDKALKAVK  233 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~dvvi~~~g~----~~~~~~~l~  233 (310)
                      |.+|++++++|+.+ |+++++++++ ++.+.++++|.+++++.+..++   ....+++|++++|+|.    ....+..++
T Consensus       154 g~~g~~~~~la~~~-g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~  231 (319)
T cd08267         154 GGVGTFAVQIAKAL-GAHVTGVCST-RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALK  231 (319)
T ss_pred             cHHHHHHHHHHHHc-CCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccC
Confidence            99999999999996 9999888865 7888888999888877654333   1223479999999873    233444599


Q ss_pred             cCCEEEEEeCCCCCC--c------------eEE---EEecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHH
Q 021628          234 EGGRVVSIIGSVTPP--A------------SSF---VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLE  296 (310)
Q Consensus       234 ~~G~~v~~g~~~~~~--~------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  296 (310)
                      ++|+++.+|......  .            ..+   ......+.+.++++++.++.+.+.  +++.|++++++++++.+.
T Consensus       232 ~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~a~~~~~  309 (319)
T cd08267         232 PGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAYRRLK  309 (319)
T ss_pred             CCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeee--eeeEEcHHHHHHHHHHHh
Confidence            999999997543110  0            000   111126778999999999998764  468899999999999998


Q ss_pred             cCCCCccEEE
Q 021628          297 SSRATGKVVI  306 (310)
Q Consensus       297 ~~~~~~k~vi  306 (310)
                      ++...+|+++
T Consensus       310 ~~~~~~~vvv  319 (319)
T cd08267         310 SGRARGKVVI  319 (319)
T ss_pred             cCCCCCcEeC
Confidence            8877777763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3.9e-31  Score=235.75  Aligned_cols=293  Identities=26%  Similarity=0.316  Sum_probs=223.8

Q ss_pred             cccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 021628            7 KEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVG   85 (310)
Q Consensus         7 ~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~G   85 (310)
                      +++|..   ++++ +.|.|+++++||+||+.++++|++|...+.+.. ......+|.++|+|++|+|+++|++++++++|
T Consensus         5 ~~~~~~---~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   80 (340)
T TIGR00692         5 TKPGYG---AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVG   80 (340)
T ss_pred             ccCCCC---cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCC
Confidence            455555   7888 899999999999999999999999998765531 11122456789999999999999999999999


Q ss_pred             CeeEeecCccc------------------cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcc
Q 021628           86 DEVYGDINEKA------------------LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA  147 (310)
Q Consensus        86 d~V~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~  147 (310)
                      |+|++......                  ..+....|+|++|++++.+.++++|++++...+ +++..+.++++++ ...
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~-~~~  158 (340)
T TIGR00692        81 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV-LAG  158 (340)
T ss_pred             CEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH-Hcc
Confidence            99987421100                  001124689999999999999999999998554 5677888888876 445


Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEe
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFD  220 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~  220 (310)
                      .++|++|+|.| +|.+|.+++++|+.+ |.+ ++++.+++++.+.++++|.+.+++....++..      ..+++|+++|
T Consensus       159 ~~~g~~vlI~~-~g~vg~~a~~la~~~-G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld  236 (340)
T TIGR00692       159 PISGKSVLVTG-AGPIGLMAIAVAKAS-GAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLE  236 (340)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEE
Confidence            67999999987 799999999999996 987 77777788899988999998888765443211      1357999999


Q ss_pred             CCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEE---ecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628          221 AVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL---TSDGSILEKLNPYFESGKVKAIIDPKGPF  283 (310)
Q Consensus       221 ~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (310)
                      +.|.   ....+++|+++|+++.+|......           .+.+..   ....+.+.++++++.++.+++...+.+.+
T Consensus       237 ~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  316 (340)
T TIGR00692       237 MSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKF  316 (340)
T ss_pred             CCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence            9773   478899999999999998542100           011111   11234577899999999987422246889


Q ss_pred             chhhHHHHHHHHHcCCCCccEEEEe
Q 021628          284 PFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++++++++.+.++.. ||+++++
T Consensus       317 ~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       317 KFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            99999999999988774 8999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-30  Score=229.66  Aligned_cols=297  Identities=35%  Similarity=0.481  Sum_probs=238.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++...+.+ +.++++ +.+.|.+.+++|+|++.++++|++|+....+.++.. ..+|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~   77 (328)
T cd08268           1 MRAVRFHQFGGP-EVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVT   77 (328)
T ss_pred             CeEEEEeccCCc-ceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCC
Confidence            899999987776 678888 788888999999999999999999998887765422 34577899999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      .+++||+|+++...    .....|++++|+.++.+.++++|++++..+++.+++.+.++|+++ ....+.++++++|+|+
T Consensus        78 ~~~~Gd~V~~~~~~----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~  153 (328)
T cd08268          78 GFAVGDRVSVIPAA----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAA  153 (328)
T ss_pred             cCCCCCEEEecccc----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            99999999986421    112358999999999999999999999999999999999999998 4688899999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      ++.+|++++++++.. |++++.+++++++.+.++++|.+.+++.+......    .  ..++|+++++.+.  ...++++
T Consensus       154 ~~~~g~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (328)
T cd08268         154 SSSVGLAAIQIANAA-GATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA  232 (328)
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence            899999999999996 99999999999999988888888777765433211    1  2379999999874  4788999


Q ss_pred             cccCCEEEEEeCCCC-----------CCceEEEEe------cCH----HHHHHHHHHHHcCCeeEEecCCcccchhhHHH
Q 021628          232 VKEGGRVVSIIGSVT-----------PPASSFVLT------SDG----SILEKLNPYFESGKVKAIIDPKGPFPFSQTLE  290 (310)
Q Consensus       232 l~~~G~~v~~g~~~~-----------~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (310)
                      ++++|+++.+|....           ..+..+...      ...    ..+..+.+++.++.+.+.  .+..|+++++++
T Consensus       233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  310 (328)
T cd08268         233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVE  310 (328)
T ss_pred             hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHH
Confidence            999999999875321           111111111      012    234555666777777653  467899999999


Q ss_pred             HHHHHHcCCCCccEEEE
Q 021628          291 AFSHLESSRATGKVVIH  307 (310)
Q Consensus       291 a~~~~~~~~~~~k~vi~  307 (310)
                      +++.+.++...+|++++
T Consensus       311 ~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         311 AHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHcCCCCceEEEe
Confidence            99999888888888875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4.2e-31  Score=218.71  Aligned_cols=276  Identities=29%  Similarity=0.367  Sum_probs=221.4

Q ss_pred             cceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeC--CCCCCCCCCCeeEe
Q 021628           14 SVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-PLPTIPGYDVAGVVEKVG--SQVKKFKVGDEVYG   90 (310)
Q Consensus        14 ~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~-~~p~~~G~e~~G~V~~~g--~~~~~~~~Gd~V~~   90 (310)
                      +.++++ +.+.|+|++|||++|+.|.++++.    ++|.+...+. ..|+-+|-..+|.++...  +..++|++||.|..
T Consensus        25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~   99 (340)
T COG2130          25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG   99 (340)
T ss_pred             CCceeE-eccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence            468999 899999999999999999999984    4555543322 235667766655444432  55678999999998


Q ss_pred             ecCccccCCCCCCCcceeEEEEecCccccCCCCCChh--hhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHH
Q 021628           91 DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV--EAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMV  167 (310)
Q Consensus        91 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~--~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a  167 (310)
                      .            .+|++|..++.+.+.++++..-+.  ....+.++..|||.+| ..+.+++|++|+|.+|+|++|..+
T Consensus       100 ~------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvv  167 (340)
T COG2130         100 V------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVV  167 (340)
T ss_pred             c------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHH
Confidence            5            589999999999999988643222  2334466788999999 689999999999999999999999


Q ss_pred             HHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhcccCCEEE
Q 021628          168 IQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV  239 (310)
Q Consensus       168 ~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v  239 (310)
                      .|+||.. |++|+.+..++||.+++++ +|.|..+|++.+++.+     .++|.|+.||++|.  +...+..|...+|++
T Consensus       168 gQiAKlk-G~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~  246 (340)
T COG2130         168 GQIAKLK-GCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIP  246 (340)
T ss_pred             HHHHHhh-CCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhcccccee
Confidence            9999985 9999999999999999976 9999999999888754     36799999999984  688999999999999


Q ss_pred             EEeCCC------CC---CceE-----------EEEecC-----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHH
Q 021628          240 SIIGSV------TP---PASS-----------FVLTSD-----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSH  294 (310)
Q Consensus       240 ~~g~~~------~~---~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  294 (310)
                      .+|...      .+   ..+.           |....+     .+.++++.+++++|+++...  +-.-.++++++||..
T Consensus       247 ~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~g  324 (340)
T COG2130         247 VCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIG  324 (340)
T ss_pred             eeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHH
Confidence            998542      11   1111           122111     35678899999999999975  456689999999999


Q ss_pred             HHcCCCCccEEEEeC
Q 021628          295 LESSRATGKVVIHPI  309 (310)
Q Consensus       295 ~~~~~~~~k~vi~~~  309 (310)
                      +.+++.+||.++++.
T Consensus       325 Ll~G~N~GK~vvKv~  339 (340)
T COG2130         325 LLSGKNFGKLVVKVA  339 (340)
T ss_pred             HhcCCccceEEEEec
Confidence            999999999999875

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=1.1e-30  Score=228.46  Aligned_cols=272  Identities=33%  Similarity=0.509  Sum_probs=224.6

Q ss_pred             CCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCC
Q 021628           24 VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN  103 (310)
Q Consensus        24 ~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~  103 (310)
                      .|++.+++|+||+.++++|++|+..+.+.++. ...+|.++|+|++|+|+++|++++++++||+|++...       ...
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-------~~~   73 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT-MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-------ESM   73 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC-CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-------CCC
Confidence            46789999999999999999999999887542 2356889999999999999999999999999998642       235


Q ss_pred             CcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628          104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (310)
Q Consensus       104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~  183 (310)
                      |+|++|++++.+.++++|++++..+++.+++.+.+||++++...+++|++|+|+++++.+|++++++++.+ |+++++++
T Consensus        74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~-g~~v~~~~  152 (303)
T cd08251          74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLK-GAEIYATA  152 (303)
T ss_pred             cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEc
Confidence            89999999999999999999999999999999999999998889999999999999999999999999996 99999999


Q ss_pred             cChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC--C-----
Q 021628          184 SSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--P-----  248 (310)
Q Consensus       184 ~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~-----  248 (310)
                      +++++.+.++++|.+.+++....++..      ..+++|+++|+++.  ....+++++++|+++.++.....  .     
T Consensus       153 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~  232 (303)
T cd08251         153 SSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS  232 (303)
T ss_pred             CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh
Confidence            999999999999998888765543321      12479999999863  57889999999999998754311  1     


Q ss_pred             ----ceEEEE-ec------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          249 ----ASSFVL-TS------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       249 ----~~~~~~-~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                          ...+.. ..      .    .+.+.++++++.++.+++.  .++.|++++++++++.+.+++..+|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence                111111 00      1    1346778889999988754  4688999999999999998888878764

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.4e-29  Score=225.01  Aligned_cols=291  Identities=34%  Similarity=0.503  Sum_probs=231.4

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |++++...+.. ..++++ +.+.|++.+++|+||+.++++|++|...+.|.++. ....|..+|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~   77 (337)
T cd08275           1 RAVVLTGFGGL-DKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS-APKPPFVPGFECAGTVEAVGEGVKD   77 (337)
T ss_pred             CeEEEcCCCCc-cceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCcceeEEEEEEECCCCcC
Confidence            67888877766 668888 78888899999999999999999999988776532 2345778999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~  160 (310)
                      +++||+|++...         .|+|++|+.++...++++|+++++.+++.+++.+.++|+++ +....++|++|+|+|++
T Consensus        78 ~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  148 (337)
T cd08275          78 FKVGDRVMGLTR---------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAA  148 (337)
T ss_pred             CCCCCEEEEecC---------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCc
Confidence            999999999742         58999999999999999999999999999999999999998 57889999999999988


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhc
Q 021628          161 GGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      |.+|++++++|+.+ . .++++. .++++.+.++++|.+.+++.+..++..     ..+++|+++|+.|.  ...+++++
T Consensus       149 g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l  226 (337)
T cd08275         149 GGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL  226 (337)
T ss_pred             chHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence            99999999999984 2 223332 345678888889988887765443211     23579999999874  57889999


Q ss_pred             ccCCEEEEEeCCCCC---------------------------CceEEEEe------cC----HHHHHHHHHHHHcCCeeE
Q 021628          233 KEGGRVVSIIGSVTP---------------------------PASSFVLT------SD----GSILEKLNPYFESGKVKA  275 (310)
Q Consensus       233 ~~~G~~v~~g~~~~~---------------------------~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~  275 (310)
                      +++|+++.+|.....                           .+..+...      ..    ...+.++++++.++.+.+
T Consensus       227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd08275         227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP  306 (337)
T ss_pred             ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence            999999999754310                           01111100      00    134677888999998775


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .  .++.|++++++++++.+.++...+|+++++
T Consensus       307 ~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         307 K--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             c--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            4  357899999999999999888888988764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=3.2e-29  Score=221.00  Aligned_cols=291  Identities=40%  Similarity=0.565  Sum_probs=235.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCC-CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||++++.+++.. ..+++. +.+ |.+. +++++|++.++++|++|+..+.|.+.. ....|..+|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~~g~e~~G~v~~~g~~~   76 (323)
T cd08241           1 MKAVVCKELGGP-EDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGVVEAVGEGV   76 (323)
T ss_pred             CeEEEEecCCCc-ceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC-CCCCCCcccceeEEEEEEeCCCC
Confidence            899999977766 667887 777 6665 599999999999999999988776531 12346689999999999999999


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEc
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (310)
                      ..+++||+|++...         .|++++|+.++...++++|++++..+++.+.+.+.+|++++. ...++++++|+|+|
T Consensus        77 ~~~~~G~~V~~~~~---------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g  147 (323)
T cd08241          77 TGFKVGDRVVALTG---------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLG  147 (323)
T ss_pred             CCCCCCCEEEEecC---------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence            99999999999741         489999999999999999999999888888889999999984 68899999999999


Q ss_pred             CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHh
Q 021628          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~  230 (310)
                      ++|.+|++++++++.. |++++.+++++++.+.++++|.+.+++....++..      ..+++|+++++.|.  ...+++
T Consensus       148 ~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~  226 (323)
T cd08241         148 AAGGVGLAAVQLAKAL-GARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLR  226 (323)
T ss_pred             CCchHHHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence            8899999999999996 99999999999999999889987777765433321      12479999999874  578899


Q ss_pred             hcccCCEEEEEeCCCCC-----------CceEEEEec-----------CHHHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          231 AVKEGGRVVSIIGSVTP-----------PASSFVLTS-----------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      +++++|+++.++.....           ....+....           ....+.++++++.++.+.+.  .++.|+++++
T Consensus       227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  304 (323)
T cd08241         227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQA  304 (323)
T ss_pred             hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHH
Confidence            99999999998753211           111111100           12457788999999988653  5688999999


Q ss_pred             HHHHHHHHcCCCCccEEEE
Q 021628          289 LEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi~  307 (310)
                      +++++.+.++...+|++++
T Consensus       305 ~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         305 AEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHhCCCCCcEEeC
Confidence            9999998888777788763

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=4.3e-29  Score=219.28  Aligned_cols=236  Identities=31%  Similarity=0.460  Sum_probs=191.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||+++..+.++  ..++++ +++.|++.+++|+||+.++++|++|.....+.+.  ....|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~--~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~--~~~~p~~~G~e~~G~V~~vG~~v~   75 (306)
T cd08258           1 MKALVKTGPGP--GNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD--PVETPVVLGHEFSGTIVEVGPDVE   75 (306)
T ss_pred             CeeEEEecCCC--CceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC--cCCCCeeeccceEEEEEEECCCcC
Confidence            89999987542  457888 8999999999999999999999999988887652  234578899999999999999999


Q ss_pred             CCCCCCeeEeecCcccc-------------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINEKAL-------------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~-------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      .+++||+|++.....+.                   .+....|+|++|++++...++++|+++++.+++ ++..+.++|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            99999999986421000                   001125899999999999999999999999887 6667788999


Q ss_pred             HH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe--cChhhHHHHHHcCCCEEeeCCCCcccc------cC
Q 021628          142 GL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT--SSTAKLDLLRSLGADLAIDYTKENIED------LP  212 (310)
Q Consensus       142 al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~  212 (310)
                      ++ ..++++++++|+|.| +|.+|.+++++|+.+ |.+++++.  +++++.+.++++|++.+ +....++..      ..
T Consensus       155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~-G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~  231 (306)
T cd08258         155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQ-GATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDG  231 (306)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCC
Confidence            98 578899999999977 899999999999996 99987763  35567788889998877 665444321      12


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +++|++||+.|.   ....+++|+++|+++.+|...
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  267 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFG  267 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence            479999999863   478899999999999998754

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=3.1e-29  Score=217.45  Aligned_cols=224  Identities=21%  Similarity=0.237  Sum_probs=173.7

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCeeEeecCc-----------c-------ccC-------CCCCCCcceeEEE
Q 021628           63 IPGYDVAGVVEKVGSQVK------KFKVGDEVYGDINE-----------K-------ALD-------HPKRNGSLAEYTA  111 (310)
Q Consensus        63 ~~G~e~~G~V~~~g~~~~------~~~~Gd~V~~~~~~-----------~-------~~~-------~~~~~g~~~~~~~  111 (310)
                      ++|||++|+|+++|++++      ++++||||...+..           .       ...       +...+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999998      89999999764320           0       000       1113699999999


Q ss_pred             EecC-ccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhH
Q 021628          112 VEEN-LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKL  189 (310)
Q Consensus       112 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~  189 (310)
                      +|.. .++++|+++++++++.+++++.|+|++++.....+|++|+|+| +|++|++++++|+.+ |++ |++++++++|+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~-G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVG-AGMLGLTAAAAAAAA-GAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHH
Confidence            9987 7999999999999999999999999999766677999999998 699999999999996 986 77888899999


Q ss_pred             HHHHHcCCCEEeeCCCCc--ccc--cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CCce----------
Q 021628          190 DLLRSLGADLAIDYTKEN--IED--LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PPAS----------  250 (310)
Q Consensus       190 ~~~~~~g~~~~~~~~~~~--~~~--~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~~~----------  250 (310)
                      +.++++|++.+++.....  ...  ...++|++||++|.   ++.++++++++|+++.+|....  +..+          
T Consensus       159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~  238 (280)
T TIGR03366       159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWL  238 (280)
T ss_pred             HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCc
Confidence            999999999888754321  111  12479999999974   4789999999999999985421  1111          


Q ss_pred             EEEE--ecCHHHHHHHHHHHHcC--CeeEEecCCcccchhhH
Q 021628          251 SFVL--TSDGSILEKLNPYFESG--KVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       251 ~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  288 (310)
                      .+..  ....++++++++++.++  ++++...++++|+++|+
T Consensus       239 ~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       239 TIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             EEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            1111  11246788999999874  45554567888998763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=5.7e-28  Score=209.74  Aligned_cols=260  Identities=34%  Similarity=0.474  Sum_probs=213.4

Q ss_pred             CcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeE
Q 021628           30 DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY  109 (310)
Q Consensus        30 ~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~  109 (310)
                      +||+||+.++++|++|++...|.+    ..+|.++|||++|+|+++|+++..+++||+|++..          .|+|++|
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~----------~g~~~~~   66 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA----------PGAFATH   66 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe----------cCcccce
Confidence            589999999999999999888754    23578899999999999999999999999999864          4899999


Q ss_pred             EEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          110 TAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       110 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +.++...++++|++++..+++.+++++.++++++ +...+++|++|+|+|+.|.+|++++++++.+ |++++.+++++++
T Consensus        67 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~-g~~v~~~~~~~~~  145 (293)
T cd05195          67 VRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATVGSEEK  145 (293)
T ss_pred             EEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHc-CCEEEEEeCCHHH
Confidence            9999999999999999999999999999999998 5688999999999998999999999999996 9999999999999


Q ss_pred             HHHHHHcC--CCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC--Cc-------
Q 021628          189 LDLLRSLG--ADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP--PA-------  249 (310)
Q Consensus       189 ~~~~~~~g--~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~--~~-------  249 (310)
                      .+.+++++  .+.+++....++..      ..+++|+++++.|.  ...++++++++|+++.++.....  ..       
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~  225 (293)
T cd05195         146 REFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFL  225 (293)
T ss_pred             HHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhc
Confidence            99998887  67777655433211      13479999999884  58899999999999998754311  01       


Q ss_pred             --eEEEE-ec------C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          250 --SSFVL-TS------D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       250 --~~~~~-~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                        ..+.. ..      .    ...+..+++++.++.+++.  .++.+++++++++++.+.++...+|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPL--PPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccC--CCeeechhhHHHHHHHHhcCCCCceecC
Confidence              11111 00      1    2346778889999988753  4678999999999999998887777763

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.3e-27  Score=207.18  Aligned_cols=255  Identities=34%  Similarity=0.507  Sum_probs=208.6

Q ss_pred             EEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEe
Q 021628           34 IKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE  113 (310)
Q Consensus        34 V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~  113 (310)
                      ||+.++++|++|++...|.++     .|.++|||++|+|+++|++++.+++||+|++..          .|+|++|+.++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------~g~~~~~~~~~   66 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------PGSFATYVRTD   66 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc----------CCceeeEEEcc
Confidence            789999999999999887652     367899999999999999999999999999864          48999999999


Q ss_pred             cCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          114 ENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       114 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.++++|+++++.+++.+++.+.++++++ +...+++|++|+|+|++|.+|++++++++.. |++++++++++++.+.+
T Consensus        67 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~-g~~v~~~~~~~~~~~~~  145 (288)
T smart00829       67 ARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHL-GAEVFATAGSPEKRDFL  145 (288)
T ss_pred             HHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            999999999999999999999999999998 6788999999999999999999999999995 99999999999999999


Q ss_pred             HHcCC--CEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC--CC---------ceE
Q 021628          193 RSLGA--DLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--PP---------ASS  251 (310)
Q Consensus       193 ~~~g~--~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~--~~---------~~~  251 (310)
                      +++|.  +.+++....++..      ..+++|+++|+++.  ....+++++++|+++.+|....  ..         ...
T Consensus       146 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~  225 (288)
T smart00829      146 RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVS  225 (288)
T ss_pred             HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCce
Confidence            99997  6777665443221      12479999999873  4788999999999999975421  00         111


Q ss_pred             EEEe-c-----C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          252 FVLT-S-----D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       252 ~~~~-~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                      +... .     .    ...+..+++++.++++.+.  ..+.|++++++++++.+..+...+|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      226 YHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            1110 0     1    1346678888988888753  3578999999999999988877677663

Enoylreductase in Polyketide synthases.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3.3e-26  Score=197.00  Aligned_cols=212  Identities=40%  Similarity=0.557  Sum_probs=177.8

Q ss_pred             cEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCcc--------------c
Q 021628           31 QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEK--------------A   96 (310)
Q Consensus        31 eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~--------------~   96 (310)
                      ||+|++.++++|++|+..+.|..+ .....|.++|||++|+|+++|++++.+++||+|++.....              .
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~   79 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGG   79 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCC
Confidence            689999999999999999988653 1245578899999999999999999999999999875311              1


Q ss_pred             cCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhc
Q 021628           97 LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF  175 (310)
Q Consensus        97 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~  175 (310)
                      ..+....|++++|+.++...++++|+++++.+++.+++.+.+||+++. ...++++++|+|+|+.+ +|++++++++.. 
T Consensus        80 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~-  157 (271)
T cd05188          80 ILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA-  157 (271)
T ss_pred             EeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc-
Confidence            112223689999999999999999999999999999999999999995 55568999999999666 999999999996 


Q ss_pred             CCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       176 g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      |.+++++++++++.+.++++|.+.+++....+...     ..+++|++|++++.   ...++++++++|+++.++...
T Consensus       158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~  235 (271)
T cd05188         158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS  235 (271)
T ss_pred             CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence            99999999999999999999988887765443322     13579999999875   478899999999999998654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.95  E-value=9.3e-26  Score=195.41  Aligned_cols=229  Identities=32%  Similarity=0.392  Sum_probs=185.1

Q ss_pred             CCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHH
Q 021628           58 SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE  137 (310)
Q Consensus        58 ~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  137 (310)
                      ..+|.++|||++|+|+++|++++++++||+|+++            +.|++|+.++...++++|++++..+++.+ +.++
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~   84 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAA   84 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHH
Confidence            4578999999999999999999999999999985            46999999999999999999999999888 7899


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcC-CCEEeeCCCCcccccCCCc
Q 021628          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLG-ADLAIDYTKENIEDLPEKF  215 (310)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~  215 (310)
                      +||+++...++++|++++|+| +|.+|++++++|+.+ |.+ ++++++++++.+.++++| .+.+++.....  ...+++
T Consensus        85 ta~~~~~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~-g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~  160 (277)
T cd08255          85 TALNGVRDAEPRLGERVAVVG-LGLVGLLAAQLAKAA-GAREVVGVDPDAARRELAEALGPADPVAADTADE--IGGRGA  160 (277)
T ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCcEEEECCCHHHHHHHHHcCCCccccccchhh--hcCCCC
Confidence            999998888999999999997 799999999999996 888 899999999999889998 55555433211  123479


Q ss_pred             cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC----------CceEEEE---ec-----------CHHHHHHHHHHH
Q 021628          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP----------PASSFVL---TS-----------DGSILEKLNPYF  268 (310)
Q Consensus       216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~---~~-----------~~~~~~~~~~~~  268 (310)
                      |++||+++.   ....+++++++|+++.+|.....          ....+..   ..           ..+.++++++++
T Consensus       161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (277)
T cd08255         161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL  240 (277)
T ss_pred             CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence            999999763   47889999999999999754321          0111111   00           124688899999


Q ss_pred             HcCCeeEEecCCcccchhhHHHHHHHHHcC-CCCccEE
Q 021628          269 ESGKVKAIIDPKGPFPFSQTLEAFSHLESS-RATGKVV  305 (310)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~k~v  305 (310)
                      .++.+++.  +.+.|++++++++++.+.++ ....|++
T Consensus       241 ~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         241 AEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             HcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeee
Confidence            99997764  46889999999999999877 3444654

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.94  E-value=5e-26  Score=214.44  Aligned_cols=277  Identities=23%  Similarity=0.308  Sum_probs=225.6

Q ss_pred             CCCccceEEeccccCC---CCCCCcEEEEEeEeecCHHHHHHHhCCCCCCC-----CCCCcccccceeEEEEEeCCCCCC
Q 021628           10 GNSQSVLKFETNVEVP---SLREDQVLIKVVAAALNPIDFKRMLGAFSATD-----SPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus        10 g~~~~~l~~~~~~~~~---~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      |++ ..|+|. +.|..   +..++.=+.-|.|++|+.+|+....|..+...     ....+++|-|++|+          
T Consensus      1424 GDl-sSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR---------- 1491 (2376)
T KOG1202|consen 1424 GDL-SSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR---------- 1491 (2376)
T ss_pred             ccc-cceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------
Confidence            666 789998 77754   34778788899999999999999999875321     23458899999887          


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGA  160 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~  160 (310)
                      .+-|.||.++.+         --+.++.+.++.+.++.+|+++..++|+.+|+-+.|+|||+ .+...++|+++|||+++
T Consensus      1492 d~~GrRvM~mvp---------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGs 1562 (2376)
T KOG1202|consen 1492 DASGRRVMGMVP---------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGS 1562 (2376)
T ss_pred             cCCCcEEEEeee---------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCC
Confidence            455999999865         46789999999999999999999999999999999999999 68999999999999999


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c---CCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHH
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L---GADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKA  228 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~  228 (310)
                      |++|++|+.+|.++ |+.|+.++.+.||++++.+ |   ...++-|+.+.++..      ..+|+|+|++....  ++..
T Consensus      1563 GGVGQAAIaiALa~-G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQAS 1641 (2376)
T KOG1202|consen 1563 GGVGQAAIAIALAH-GCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQAS 1641 (2376)
T ss_pred             CchhHHHHHHHHHc-CCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHH
Confidence            99999999999996 9999999999999999954 3   345667777777643      35699999998763  6889


Q ss_pred             HhhcccCCEEEEEeCCCCCC-----------ceEEEE-------ecCHHHHHHHHHHHHcC----CeeEEecCCcccchh
Q 021628          229 LKAVKEGGRVVSIIGSVTPP-----------ASSFVL-------TSDGSILEKLNPYFESG----KVKAIIDPKGPFPFS  286 (310)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~~~-----------~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  286 (310)
                      ++||+..|||...|....+.           +.+|..       ....+.+.++.+++++|    ..+|  +++++|+-.
T Consensus      1642 iRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~P--L~ttvF~~~ 1719 (2376)
T KOG1202|consen 1642 IRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRP--LPTTVFHGQ 1719 (2376)
T ss_pred             HHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceec--cccccccHH
Confidence            99999999999998654322           222321       11235566777777664    4444  568999999


Q ss_pred             hHHHHHHHHHcCCCCccEEEEeCC
Q 021628          287 QTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       287 ~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      ++++||+.|.+++..||+|++..+
T Consensus      1720 qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1720 QVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred             HHHHHHHHHhccCccceEEEEEcc
Confidence            999999999999999999998753

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=4.6e-23  Score=170.53  Aligned_cols=267  Identities=27%  Similarity=0.351  Sum_probs=204.5

Q ss_pred             CCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccc----cceeEEEEEeCCCCCCCCCCCeeEeecCccccCCC
Q 021628           25 PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPG----YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHP  100 (310)
Q Consensus        25 ~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~  100 (310)
                      .++++++|+||..|.+..+.-...+....+. .--.|+.+|    ..++|+|++  ++-+++++||.|.++.        
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~-~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~--------  101 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPS-DYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV--------  101 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcc-cccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec--------
Confidence            4579999999999999998865544333221 011222333    367899998  4557899999999974        


Q ss_pred             CCCCcceeEEEEecC--ccccCCC--CCChhhhcc-ccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhh
Q 021628          101 KRNGSLAEYTAVEEN--LLALKPK--NLSFVEAAS-LPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHV  174 (310)
Q Consensus       101 ~~~g~~~~~~~~~~~--~~~~ip~--~~~~~~aa~-~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~  174 (310)
                          +|.+|.+++..  ..++++.  +.++-.... +.++.+|||-.+ +.+.+++|++|+|.||+|++|+++.|+|+.+
T Consensus       102 ----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~  177 (343)
T KOG1196|consen  102 ----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLM  177 (343)
T ss_pred             ----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhc
Confidence                79999999764  3445443  455444433 367888999888 6899999999999999999999999999998


Q ss_pred             cCCcEEEEecChhhHHHH-HHcCCCEEeeCCCC-cccc-----cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCC
Q 021628          175 FGASKVAATSSTAKLDLL-RSLGADLAIDYTKE-NIED-----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       175 ~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~-----~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (310)
                       |++|+..+.+.||..++ +++|.|..+|+.++ +...     .++|.|+.||.+|.  ....+..|...||++.+|..+
T Consensus       178 -Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS  256 (343)
T KOG1196|consen  178 -GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS  256 (343)
T ss_pred             -CCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence             99999999999999999 46899999999887 4332     25699999999984  478899999999999998643


Q ss_pred             -----CCCc---eEE-----------EEe----cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCc
Q 021628          246 -----TPPA---SSF-----------VLT----SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG  302 (310)
Q Consensus       246 -----~~~~---~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  302 (310)
                           .+..   ..+           ...    ...+.+..+.+++++|+|+....+  .-.++..+.||..|..++..|
T Consensus       257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvG  334 (343)
T KOG1196|consen  257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVG  334 (343)
T ss_pred             hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCccc
Confidence                 1111   111           111    123557889999999999987543  457999999999999999999


Q ss_pred             cEEEEeC
Q 021628          303 KVVIHPI  309 (310)
Q Consensus       303 k~vi~~~  309 (310)
                      |.++++.
T Consensus       335 Kqiv~va  341 (343)
T KOG1196|consen  335 KQLVKVA  341 (343)
T ss_pred             ceEEEee
Confidence            9998764

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.74  E-value=1.8e-17  Score=122.83  Aligned_cols=91  Identities=33%  Similarity=0.380  Sum_probs=73.6

Q ss_pred             CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCeeEeecC---------------
Q 021628           29 EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN---------------   93 (310)
Q Consensus        29 ~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~---------------   93 (310)
                      ||||+||+.+++||++|++.+.|.. .....+|.++|||++|+|+++|+++.+|++||+|+..+.               
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~-~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGP-PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSS-SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhcc-ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccc
Confidence            6899999999999999999999842 134678999999999999999999999999999988542               


Q ss_pred             ---ccccCCCCCCCcceeEEEEecCccccC
Q 021628           94 ---EKALDHPKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        94 ---~~~~~~~~~~g~~~~~~~~~~~~~~~i  120 (310)
                         .....+...+|+|++|+++|.++++++
T Consensus        80 ~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence               112234456899999999999998874

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.31  E-value=2e-11  Score=93.20  Aligned_cols=83  Identities=42%  Similarity=0.643  Sum_probs=73.0

Q ss_pred             chHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc----C--CCccEEEeCCCC---hHHHHhhc
Q 021628          162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----P--EKFDVVFDAVGQ---CDKALKAV  232 (310)
Q Consensus       162 ~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~--~~~dvvi~~~g~---~~~~~~~l  232 (310)
                      ++|++++|+|+.+ |++|++++++++|++.++++|+++++++++.++.+.    .  +++|+||||+|+   ++.+++++
T Consensus         1 ~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAM-GAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHT-TSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHc-CCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            4899999999996 899999999999999999999999999887754321    2  379999999994   58999999


Q ss_pred             ccCCEEEEEeCCC
Q 021628          233 KEGGRVVSIIGSV  245 (310)
Q Consensus       233 ~~~G~~v~~g~~~  245 (310)
                      +++|+++.+|.+.
T Consensus        80 ~~~G~~v~vg~~~   92 (130)
T PF00107_consen   80 RPGGRIVVVGVYG   92 (130)
T ss_dssp             EEEEEEEEESSTS
T ss_pred             ccCCEEEEEEccC
Confidence            9999999999776

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.16  E-value=3.8e-11  Score=91.33  Aligned_cols=108  Identities=40%  Similarity=0.557  Sum_probs=74.7

Q ss_pred             cCCCEEeeCCCCcccccCCCccEEEeCCC--C--h-HHHHhhcccCCEEEEEeCC-C------CCCceEEEEec------
Q 021628          195 LGADLAIDYTKENIEDLPEKFDVVFDAVG--Q--C-DKALKAVKEGGRVVSIIGS-V------TPPASSFVLTS------  256 (310)
Q Consensus       195 ~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~--~-~~~~~~l~~~G~~v~~g~~-~------~~~~~~~~~~~------  256 (310)
                      ||++++++++.+++ ...+++|+|||+.|  .  . ..++++| ++|+++.++.. .      ...........      
T Consensus         1 LGAd~vidy~~~~~-~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPNA   78 (127)
T ss_dssp             CT-SEEEETTCSHH-HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--HH
T ss_pred             CCcCEEecCCCccc-cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCCc
Confidence            68899999987666 44679999999998  3  1 5566777 99999999851 1      01112222111      


Q ss_pred             -CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEE
Q 021628          257 -DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI  306 (310)
Q Consensus       257 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi  306 (310)
                       ..+.++++.+++.+|++++.+  .++||++++.+|++.+.+++..||+||
T Consensus        79 ~~~~~l~~l~~l~~~G~l~~~i--~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   79 IRAEALEELAELVAEGKLKPPI--DRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHHHHHHTTSS---E--EEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             hHHHHHHHHHHHHHCCCeEEee--ccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence             235699999999999999975  478999999999999999999999986

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.14  E-value=8.9e-10  Score=99.07  Aligned_cols=162  Identities=19%  Similarity=0.199  Sum_probs=116.5

Q ss_pred             HHHHH-Hh-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCcc
Q 021628          139 AYEGL-ER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       139 a~~al-~~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d  216 (310)
                      .+.++ +. ....+|++|+|.| .|.+|+.+++.++.+ |++|++++.++.|++.++.+|++.+ +.     .+..+++|
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~-Ga~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v~~aD  259 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQ-GARVIVTEVDPICALQAAMEGYEVM-TM-----EEAVKEGD  259 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEECChhhHHHHHhcCCEEc-cH-----HHHHcCCC
Confidence            34454 32 3346899999999 999999999999996 9999999999999999999997533 11     12235789


Q ss_pred             EEEeCCCC---hHH-HHhhcccCCEEEEEeCCCCCC--------ceEEE-EecC-HH-HHH--HHHHHHHcCCe-eEEec
Q 021628          217 VVFDAVGQ---CDK-ALKAVKEGGRVVSIIGSVTPP--------ASSFV-LTSD-GS-ILE--KLNPYFESGKV-KAIID  278 (310)
Q Consensus       217 vvi~~~g~---~~~-~~~~l~~~G~~v~~g~~~~~~--------~~~~~-~~~~-~~-~~~--~~~~~~~~~~~-~~~~~  278 (310)
                      +||+|+|+   +.. .+.+++++|+++.+|.....-        ..... .... .+ .++  ..+.++.+|++ .....
T Consensus       260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~  339 (413)
T cd00401         260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFDVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA  339 (413)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCCCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence            99999985   344 489999999999998643111        11111 1111 11 345  68999999998 65556


Q ss_pred             CCcc-----cchh-hHHHHHHHHHcCCCC-ccEEEEe
Q 021628          279 PKGP-----FPFS-QTLEAFSHLESSRAT-GKVVIHP  308 (310)
Q Consensus       279 ~~~~-----~~~~-~~~~a~~~~~~~~~~-~k~vi~~  308 (310)
                      .+|.     ++|+ |+.+++..+.++... .|+++.+
T Consensus       340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            6788     9999 999999998876542 4565543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.00  E-value=3.5e-09  Score=97.64  Aligned_cols=131  Identities=18%  Similarity=0.236  Sum_probs=94.3

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcc------------------
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENI------------------  208 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~------------------  208 (310)
                      ..++++|+|+| +|.+|++|++.|+.+ |++|++++.++++++.++++|++.+ ++..+++.                  
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~l-GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSL-GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            46899999999 999999999999997 9999999999999999999999854 55432110                  


Q ss_pred             ---cccCCCccEEEeCCCC---------hHHHHhhcccCCEEEEEeCCC-C----CC---------ceEEEE-ecCHHHH
Q 021628          209 ---EDLPEKFDVVFDAVGQ---------CDKALKAVKEGGRVVSIIGSV-T----PP---------ASSFVL-TSDGSIL  261 (310)
Q Consensus       209 ---~~~~~~~dvvi~~~g~---------~~~~~~~l~~~G~~v~~g~~~-~----~~---------~~~~~~-~~~~~~~  261 (310)
                         .+..+++|+||+|++.         .++.++.++++|+++.++... .    ..         ...+.. ......+
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~  319 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL  319 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence               0112579999999973         388999999999999998642 1    11         001111 1122334


Q ss_pred             H-HHHHHHHcCCeeEEecCC
Q 021628          262 E-KLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       262 ~-~~~~~~~~~~~~~~~~~~  280 (310)
                      . ...+++.++.++.....+
T Consensus       320 p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        320 PTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHHhCCccHHHHhc
Confidence            4 588888888876544333

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.34  E-value=1.6e-05  Score=68.68  Aligned_cols=158  Identities=18%  Similarity=0.233  Sum_probs=96.6

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHH----cCCCEE--eeCCCCcccccCCCcc
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRS----LGADLA--IDYTKENIEDLPEKFD  216 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~~~~d  216 (310)
                      .+.+++|++||.+| +|. |..+..+++.. +.  +++.++.+++.++.+++    .+.+.+  +..+-+......+.+|
T Consensus        72 ~~~~~~g~~VLDiG-~G~-G~~~~~~a~~~-g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD  148 (272)
T PRK11873         72 LAELKPGETVLDLG-SGG-GFDCFLAARRV-GPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVD  148 (272)
T ss_pred             hccCCCCCEEEEeC-CCC-CHHHHHHHHHh-CCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCcee
Confidence            45688999999999 777 98888888875 54  68899999998888865    333221  1111111111234799


Q ss_pred             EEEeCC-C----C----hHHHHhhcccCCEEEEEeCCCCCC---ce----EEEE--ecCHHHHHHHHHHHHc-CCeeEEe
Q 021628          217 VVFDAV-G----Q----CDKALKAVKEGGRVVSIIGSVTPP---AS----SFVL--TSDGSILEKLNPYFES-GKVKAII  277 (310)
Q Consensus       217 vvi~~~-g----~----~~~~~~~l~~~G~~v~~g~~~~~~---~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~  277 (310)
                      +|+... .    +    +.++.+.|+|+|+++..+......   .+    .+..  ........++.+++.+ |......
T Consensus       149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i  228 (272)
T PRK11873        149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI  228 (272)
T ss_pred             EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence            998653 1    1    478999999999999876432111   00    0000  0001123456666665 3333333


Q ss_pred             cCCcccchhhHHHHHHHH--HcCCCCccEE
Q 021628          278 DPKGPFPFSQTLEAFSHL--ESSRATGKVV  305 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~--~~~~~~~k~v  305 (310)
                      .....+++++..++++.+  .++...++.+
T Consensus       229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             EeccceecccHHHHHHHhccccccccCceE
Confidence            345678899999999888  5554444443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.31  E-value=4.6e-06  Score=77.06  Aligned_cols=94  Identities=22%  Similarity=0.435  Sum_probs=74.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-------------c-------
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-------------N-------  207 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~-------  207 (310)
                      .++++|+|+| +|.+|++++++++.+ |++|++++.++++++.++++|.+.+ ++..++             +       
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~l-GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            4679999999 899999999999996 9999999999999999999998653 332110             0       


Q ss_pred             -ccccCCCccEEEeCC---C--C----hHHHHhhcccCCEEEEEeCC
Q 021628          208 -IEDLPEKFDVVFDAV---G--Q----CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       208 -~~~~~~~~dvvi~~~---g--~----~~~~~~~l~~~G~~v~~g~~  244 (310)
                       +.+..+++|++|+|+   |  .    .++.++.|++++.++.++..
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence             111235799999998   4  2    27889999999999999644

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.16  E-value=1.5e-05  Score=72.20  Aligned_cols=100  Identities=23%  Similarity=0.298  Sum_probs=76.0

Q ss_pred             HHHHHHHhc-ccC-CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCc
Q 021628          138 TAYEGLERS-AFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF  215 (310)
Q Consensus       138 ta~~al~~~-~~~-~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  215 (310)
                      ..|.++..+ .+. .|++|+|.| .|.+|...++.++.+ |++|++++.++.+...+...|.+ +.+     ..+..+++
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~-Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~a  268 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGL-GARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAELG  268 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhCC
Confidence            355666433 444 899999999 899999999999996 99999999998887666666654 221     22334589


Q ss_pred             cEEEeCCCC---h-HHHHhhcccCCEEEEEeCCC
Q 021628          216 DVVFDAVGQ---C-DKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       216 dvvi~~~g~---~-~~~~~~l~~~G~~v~~g~~~  245 (310)
                      |+||+++|+   + ...+..+++++.++..|...
T Consensus       269 DVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        269 DIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             CEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            999999985   2 36788999999999887643

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.11  E-value=3.9e-05  Score=66.87  Aligned_cols=91  Identities=19%  Similarity=0.372  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~  226 (310)
                      .+.+|+|+| .|.+|+.++..++.+ |++|++.++++++++.++++|...+ ..  ++..+...++|+||+|++.   .+
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~-Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKAL-GANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGKIDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCCCCEEEECCChhhhhH
Confidence            589999999 899999999999996 9999999999988888888886532 11  1223334579999999873   26


Q ss_pred             HHHhhcccCCEEEEEeCCC
Q 021628          227 KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (310)
                      ..++.+++++.++.++..+
T Consensus       226 ~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        226 EVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             HHHHcCCCCcEEEEEccCC
Confidence            7788899999999887654

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.98  E-value=6.3e-05  Score=67.87  Aligned_cols=89  Identities=21%  Similarity=0.268  Sum_probs=70.6

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      ...|++|+|.| .|.+|+..++.++.+ |++|++++.++.+...+...|.. +.+.     .+..++.|+||++.|+   
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~-Ga~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal~~aDVVItaTG~~~v  263 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGM-GARVIVTEVDPIRALEAAMDGFR-VMTM-----EEAAKIGDIFITATGNKDV  263 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhC-cCEEEEEeCChhhHHHHHhcCCE-eCCH-----HHHHhcCCEEEECCCCHHH
Confidence            46899999999 999999999999995 99999999888887666666753 2211     2223578999999985   


Q ss_pred             h-HHHHhhcccCCEEEEEeCC
Q 021628          225 C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ~-~~~~~~l~~~G~~v~~g~~  244 (310)
                      + ...+..+++++.++.+|..
T Consensus       264 I~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       264 IRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             HHHHHHhcCCCCcEEEEECCC
Confidence            2 3588899999999988764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.92  E-value=0.00039  Score=59.23  Aligned_cols=157  Identities=19%  Similarity=0.244  Sum_probs=96.7

Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~  160 (310)
                      .+.+|++++..+            +|.++.. +...++.+++++++..+..-....  .+..+. ....++++|+-+| +
T Consensus        66 p~~~g~~~~i~p------------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~~--~l~~l~-~~~~~~~~VLDiG-c  128 (250)
T PRK00517         66 PIRIGDRLWIVP------------SWEDPPD-PDEINIELDPGMAFGTGTHPTTRL--CLEALE-KLVLPGKTVLDVG-C  128 (250)
T ss_pred             CEEEcCCEEEEC------------CCcCCCC-CCeEEEEECCCCccCCCCCHHHHH--HHHHHH-hhcCCCCEEEEeC-C
Confidence            367888877654            3555543 666778888887776543221111  122222 2356899999999 7


Q ss_pred             cchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHc----CCCEEeeCCCCcccccCCCccEEEeCCC-C-----hHHHH
Q 021628          161 GGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDLPEKFDVVFDAVG-Q-----CDKAL  229 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~-----~~~~~  229 (310)
                      |. |.+++.+++.  |. +++.++.++...+.+++.    +....+..     ......+|+|+.... .     ++.+.
T Consensus       129 Gs-G~l~i~~~~~--g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~-----~~~~~~fD~Vvani~~~~~~~l~~~~~  200 (250)
T PRK00517        129 GS-GILAIAAAKL--GAKKVLAVDIDPQAVEAARENAELNGVELNVYL-----PQGDLKADVIVANILANPLLELAPDLA  200 (250)
T ss_pred             cH-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-----ccCCCCcCEEEEcCcHHHHHHHHHHHH
Confidence            76 9888876664  55 588999999988877542    22110110     000115899987654 2     36788


Q ss_pred             hhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          230 KAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      +.|+++|+++..+.             .......+.+.+.+..+..
T Consensus       201 ~~LkpgG~lilsgi-------------~~~~~~~v~~~l~~~Gf~~  233 (250)
T PRK00517        201 RLLKPGGRLILSGI-------------LEEQADEVLEAYEEAGFTL  233 (250)
T ss_pred             HhcCCCcEEEEEEC-------------cHhhHHHHHHHHHHCCCEE
Confidence            89999999998763             2234455666666655543

>PLN02494 adenosylhomocysteinase

Probab=97.82  E-value=7.9e-05  Score=67.95  Aligned_cols=88  Identities=20%  Similarity=0.220  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---h
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~  225 (310)
                      -.|++|+|.| .|.+|...++.++.. |++|+++..++.+...+...|...+ +     ..+....+|+|+++.|+   +
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~-Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----leEal~~ADVVI~tTGt~~vI  323 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAA-GARVIVTEIDPICALQALMEGYQVL-T-----LEDVVSEADIFVTTTGNKDII  323 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhHHHHhcCCeec-c-----HHHHHhhCCEEEECCCCccch
Confidence            5799999999 999999999999995 9999999988887666666665422 1     22233578999999884   2


Q ss_pred             -HHHHhhcccCCEEEEEeCC
Q 021628          226 -DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~~  244 (310)
                       ...+..|++++.++.+|..
T Consensus       324 ~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        324 MVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             HHHHHhcCCCCCEEEEcCCC
Confidence             7889999999999999874

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.72  E-value=0.0008  Score=54.70  Aligned_cols=101  Identities=22%  Similarity=0.270  Sum_probs=72.1

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh----HHHHHHcCCCEEe-eCCCCccccc-C
Q 021628          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK----LDLLRSLGADLAI-DYTKENIEDL-P  212 (310)
Q Consensus       139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~----~~~~~~~g~~~~~-~~~~~~~~~~-~  212 (310)
                      ...+++...+++|++||-+|  .+.|..++-+++.. + +|+.+.+.++=    .+.++.+|...+. ...+-..... .
T Consensus        61 vA~m~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~-~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~  136 (209)
T COG2518          61 VARMLQLLELKPGDRVLEIG--TGSGYQAAVLARLV-G-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEE  136 (209)
T ss_pred             HHHHHHHhCCCCCCeEEEEC--CCchHHHHHHHHHh-C-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCC
Confidence            33456788999999999998  56799999999985 5 89999888773    3445668864432 2222111111 2


Q ss_pred             CCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          213 EKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       213 ~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..+|.++-+++  . ++..++.|++||+++.--+
T Consensus       137 aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         137 APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            46899987765  2 5888999999999997755

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.68  E-value=0.00011  Score=64.55  Aligned_cols=104  Identities=22%  Similarity=0.273  Sum_probs=73.0

Q ss_pred             CccccCCCCCChhhhccc-cchHHHHHHHHHhccc----CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          115 NLLALKPKNLSFVEAASL-PLATETAYEGLERSAF----SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~-~~~~~ta~~al~~~~~----~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      ..++++|+.+..+.++.. +.+  .++.+++.+..    -++.+|+|.| +|.+|.++++.++..++.+++++.+++++.
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~s--v~~~Av~~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVS--ISSAAVELAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcC--HHHHHHHHHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            356788888888877766 444  46667754332    4799999999 799999999988874235778888888875


Q ss_pred             -HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628          190 -DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       190 -~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                       +.++++|.. +.+..  +..+....+|+||.|++.
T Consensus       216 ~~la~~~g~~-~~~~~--~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         216 EELAKELGGN-AVPLD--ELLELLNEADVVISATGA  248 (311)
T ss_pred             HHHHHHcCCe-EEeHH--HHHHHHhcCCEEEECCCC
Confidence             555778863 33221  222334568999999985

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.65  E-value=0.00031  Score=63.28  Aligned_cols=93  Identities=24%  Similarity=0.409  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCC-CCcccccCCCccEEEeCC---CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYT-KENIEDLPEKFDVVFDAV---GQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~-~~~~~~~~~~~dvvi~~~---g~  224 (310)
                      ++.+|+|+| +|.+|+.+++.++.+ |++|+++++++++++.+. .++........ .+.+.+....+|++|+|+   +.
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~l-Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGL-GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA  243 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence            345699999 799999999999996 999999999988887774 45543222111 122333345899999997   32


Q ss_pred             ------hHHHHhhcccCCEEEEEeCC
Q 021628          225 ------CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~~  244 (310)
                            .+..++.+++++.++.++..
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEecC
Confidence                  27788899999999998643

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.60  E-value=0.0096  Score=51.74  Aligned_cols=233  Identities=13%  Similarity=0.130  Sum_probs=123.4

Q ss_pred             CCCcccccceeEEEEEeCCCCCCCCCCCeeEeecCcccc------------------CCCCCCCcceeEEEEecCccccC
Q 021628           59 PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKAL------------------DHPKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        59 ~~p~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~------------------~~~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      .+..++-..+ ++|++  +.++++.+|+|++++.+....                  ......-.|.+|.++..+..+. 
T Consensus        29 ~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~-  104 (314)
T PF11017_consen   29 GWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD-  104 (314)
T ss_pred             cCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC-
Confidence            3444444444 67776  888999999999998652111                  0111122444454444433331 


Q ss_pred             CCCCChhhhccccchHHHHHHHHH---hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-
Q 021628          121 PKNLSFVEAASLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-  196 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-  196 (310)
                       .+....++..-| -+.|.|..-.   ....-..+.|+|+++++..++..+..++...+..-++...|+....+.+.+| 
T Consensus       105 -~~~e~~~~LlrP-Lf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~  182 (314)
T PF11017_consen  105 -PEREDWQMLLRP-LFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGC  182 (314)
T ss_pred             -cchhHHHHHHHH-HHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCC
Confidence             112222222223 3456664322   1233445788999999999999888887222444444455556666888999 


Q ss_pred             CCEEeeCCCCcccccCCCccEEEeCCCC---hHHHHhhcccCC-EEEEEeCCCC---------CC-ceEEEEecC-----
Q 021628          197 ADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGG-RVVSIIGSVT---------PP-ASSFVLTSD-----  257 (310)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G-~~v~~g~~~~---------~~-~~~~~~~~~-----  257 (310)
                      .|.++.+++-+... ....-+++|.+|+   ...+.+++...= ..+.+|....         +. ...+.....     
T Consensus       183 Yd~V~~Yd~i~~l~-~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr  261 (314)
T PF11017_consen  183 YDEVLTYDDIDSLD-APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKR  261 (314)
T ss_pred             ceEEeehhhhhhcc-CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHH
Confidence            67888775432111 2345688899985   244445554432 3444553221         00 111111110     


Q ss_pred             ------HHH---HHHH-HHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCC
Q 021628          258 ------GSI---LEKL-NPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRA  300 (310)
Q Consensus       258 ------~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  300 (310)
                            .+.   +.+. .+++.. ...+. .....-..+.+.++++.+.+++.
T Consensus       262 ~~~~G~~~~~~r~~~aw~~f~~~-~~~wl-~~~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  262 IKEWGAAEFFQRMAAAWKRFAAD-AQPWL-KVEEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHh-hcCcE-EEEEecCHHHHHHHHHHHhcCCC
Confidence                  011   1112 222222 22222 22467799999999999988764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.48  E-value=0.00099  Score=61.09  Aligned_cols=90  Identities=24%  Similarity=0.276  Sum_probs=70.2

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      ..-.|++|+|.| .|.+|...++.++.. |++|+++.+++.+...+...|... .     ++.+..+.+|+|+.+.|.  
T Consensus       250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~-Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~ADIVI~atGt~~  321 (476)
T PTZ00075        250 VMIAGKTVVVCG-YGDVGKGCAQALRGF-GARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVETADIFVTATGNKD  321 (476)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhcCCEEEECCCccc
Confidence            345799999999 999999999999995 999999988877765554456432 1     223345689999999884  


Q ss_pred             -h-HHHHhhcccCCEEEEEeCC
Q 021628          225 -C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~  244 (310)
                       + .+.++.|++++.++.+|..
T Consensus       322 iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        322 IITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ccCHHHHhccCCCcEEEEcCCC
Confidence             2 5889999999999999764

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.42  E-value=0.00031  Score=53.77  Aligned_cols=91  Identities=24%  Similarity=0.376  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHH-HHcCCC--EEeeCCCCcccccCCCccEEEeCCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      -.+.+++|+| +|++|.+++..+... |++ ++++.|+.+|.+.+ ++++..  .+...+  +.......+|+||+|++.
T Consensus        10 l~~~~vlviG-aGg~ar~v~~~L~~~-g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   10 LKGKRVLVIG-AGGAARAVAAALAAL-GAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQEADIVINATPS   85 (135)
T ss_dssp             GTTSEEEEES-SSHHHHHHHHHHHHT-TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHTESEEEE-SST
T ss_pred             cCCCEEEEEC-CHHHHHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhhCCeEEEecCC
Confidence            3688999999 899999999988886 875 88999999988777 456322  122222  222233579999999873


Q ss_pred             h-----HHHHhhcccC-CEEEEEeC
Q 021628          225 C-----DKALKAVKEG-GRVVSIIG  243 (310)
Q Consensus       225 ~-----~~~~~~l~~~-G~~v~~g~  243 (310)
                      .     +..+....+. +.++.++.
T Consensus        86 ~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   86 GMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             TSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             CCcccCHHHHHHHHhhhhceecccc
Confidence            2     3344333322 46666654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.38  E-value=0.00029  Score=67.29  Aligned_cols=76  Identities=26%  Similarity=0.463  Sum_probs=57.6

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC---------------------hhhHHHHHHcCCCEEeeCCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS---------------------TAKLDLLRSLGADLAIDYTK  205 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~---------------------~~~~~~~~~~g~~~~~~~~~  205 (310)
                      ..++|++|+|.| +|+.|++++..++.. |++|++++..                     +.+++.++++|++..++...
T Consensus       133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~-G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIG-GGPAGLSAAYHLRRM-GHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence            467899999999 999999999999985 9999888742                     34667778899876665432


Q ss_pred             -Cc--ccccCCCccEEEeCCCC
Q 021628          206 -EN--IEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       206 -~~--~~~~~~~~dvvi~~~g~  224 (310)
                       .+  ......++|+||+++|+
T Consensus       211 ~~~~~~~~~~~~~D~Vi~AtG~  232 (564)
T PRK12771        211 GEDITLEQLEGEFDAVFVAIGA  232 (564)
T ss_pred             CCcCCHHHHHhhCCEEEEeeCC
Confidence             22  22223479999999984

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.37  E-value=0.0011  Score=57.60  Aligned_cols=91  Identities=18%  Similarity=0.334  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~  226 (310)
                      .|++++|+| .|.+|.+.+..++.. |++|++..+++++.+.+.+.+...+ ..  .++.+...++|+||++++.   ..
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~-G~~V~v~~R~~~~~~~~~~~g~~~~-~~--~~l~~~l~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSAL-GARVFVGARSSADLARITEMGLIPF-PL--NKLEEKVAEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeee-cH--HHHHHHhccCCEEEECCChHHhCH
Confidence            478999999 899999999999985 9999999999888777766664321 11  1223344689999999873   25


Q ss_pred             HHHhhcccCCEEEEEeCCC
Q 021628          227 KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (310)
                      ..++.++++..++.++..+
T Consensus       225 ~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCC
Confidence            6778888888888886533

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.35  E-value=0.0004  Score=63.83  Aligned_cols=149  Identities=19%  Similarity=0.248  Sum_probs=91.4

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCeeEee-c-------CccccCCCCCCCcceeEEEEecCccccCCCCCChhhhcccc
Q 021628           62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-I-------NEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (310)
Q Consensus        62 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~-~-------~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (310)
                      ..-|||+++.+.+|+++.++.-+|+.=++- .       ...+.-+....+.|+.        .+++|+.+..+.+... 
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~i~~-  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETGIGA-  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcCCCC-
Confidence            346999999999999999886666653310 0       0000011111233333        2344554443333222 


Q ss_pred             chHHHHHHHHHhcc----cCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHH-HHHHcCCCEEeeCCCCc
Q 021628          134 LATETAYEGLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD-LLRSLGADLAIDYTKEN  207 (310)
Q Consensus       134 ~~~~ta~~al~~~~----~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~  207 (310)
                      .+.+.++.+++.+.    ..++++|+|+| +|.+|.+++..++.. |. +++++.+++++.. +++++|.+ ++..  .+
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~  235 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEK-GVRKITVANRTLERAEELAEEFGGE-AIPL--DE  235 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HH
Confidence            12334666774332    35789999999 899999999988885 86 7888899988865 55677753 2222  12


Q ss_pred             ccccCCCccEEEeCCCC
Q 021628          208 IEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       208 ~~~~~~~~dvvi~~~g~  224 (310)
                      ......++|+||+|+|+
T Consensus       236 ~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        236 LPEALAEADIVISSTGA  252 (423)
T ss_pred             HHHHhccCCEEEECCCC
Confidence            22334579999999874

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.29  E-value=0.0013  Score=52.99  Aligned_cols=108  Identities=20%  Similarity=0.258  Sum_probs=77.1

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      --.|.+|.|+| .|.+|...++.++.. |.+|++.+++........+.+...      .++.+....+|+|+.+.+.   
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~~~~~~~~~~~~------~~l~ell~~aDiv~~~~plt~~  104 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAF-GMRVIGYDRSPKPEEGADEFGVEY------VSLDELLAQADIVSLHLPLTPE  104 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSCHHHHHHHHTTEEE------SSHHHHHHH-SEEEE-SSSSTT
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecC-CceeEEecccCChhhhccccccee------eehhhhcchhhhhhhhhccccc
Confidence            34689999999 999999999999995 999999999887766444444311      1334444578999988761   


Q ss_pred             ---h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          225 ---C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 ---~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                         +  ...++.|+++..+|.++.            ..--+-+++++.+++|++.-
T Consensus       105 T~~li~~~~l~~mk~ga~lvN~aR------------G~~vde~aL~~aL~~g~i~g  148 (178)
T PF02826_consen  105 TRGLINAEFLAKMKPGAVLVNVAR------------GELVDEDALLDALESGKIAG  148 (178)
T ss_dssp             TTTSBSHHHHHTSTTTEEEEESSS------------GGGB-HHHHHHHHHTTSEEE
T ss_pred             cceeeeeeeeeccccceEEEeccc------------hhhhhhhHHHHHHhhccCce
Confidence               1  688999999999998862            11123567889999999983

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.27  E-value=0.0025  Score=54.84  Aligned_cols=96  Identities=28%  Similarity=0.483  Sum_probs=59.7

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccccCCCccEE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~dvv  218 (310)
                      ++.+++++|++||-+| +| -|-.+..+++. +|++|+.+..++++.+.++    +.|....+.....++.+....+|.|
T Consensus        55 ~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~-~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~~~~fD~I  131 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIG-CG-WGGLAIYAAER-YGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDLPGKFDRI  131 (273)
T ss_dssp             HTTTT--TT-EEEEES--T-TSHHHHHHHHH-H--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG---S-SEE
T ss_pred             HHHhCCCCCCEEEEeC-CC-ccHHHHHHHHH-cCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccccCCCCCEE
Confidence            3678999999999999 55 78889999998 5999999999999888774    3453211111112334445589988


Q ss_pred             EeC-----CCC------hHHHHhhcccCCEEEEE
Q 021628          219 FDA-----VGQ------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       219 i~~-----~g~------~~~~~~~l~~~G~~v~~  241 (310)
                      +..     +|.      ++.+-+.|+|+|+++.-
T Consensus       132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            654     331      36777899999999854

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.22  E-value=0.0014  Score=64.09  Aligned_cols=109  Identities=25%  Similarity=0.294  Sum_probs=69.6

Q ss_pred             CcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628          104 GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (310)
Q Consensus       104 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~  183 (310)
                      .++++|..++...++.+ +.++.+++.....         ...+..+|++++|+|++|.+|.+.++.+... |++|++++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~-Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAE-GACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHC-cCEEEEEe
Confidence            45666777776666666 5566666532110         0223346899999999999999999888875 99999999


Q ss_pred             cChhhHHHHH-HcCC--C-EE--eeCCCCc-ccc-------cCCCccEEEeCCC
Q 021628          184 SSTAKLDLLR-SLGA--D-LA--IDYTKEN-IED-------LPEKFDVVFDAVG  223 (310)
Q Consensus       184 ~~~~~~~~~~-~~g~--~-~~--~~~~~~~-~~~-------~~~~~dvvi~~~g  223 (310)
                      +++++.+.+. +++.  . ..  .+..+++ ...       ..+++|++|+++|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9988776553 3432  1 11  2222211 111       1247899999987

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.18  E-value=0.0013  Score=54.46  Aligned_cols=73  Identities=25%  Similarity=0.425  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--CEEeeCCCCcccc----------cCCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DLAIDYTKENIED----------LPEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~~~~~~~~~~~~----------~~~~~d  216 (310)
                      .++.++|+|+++++|.+.++.+... |++|+.+.|..++++.+ .+++.  -..+..+-.+..+          .-..+|
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~-G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEA-GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            4578999999999999999988885 99999999999999888 45763  1222222112111          123689


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      +.++.+|
T Consensus        84 iLvNNAG   90 (246)
T COG4221          84 ILVNNAG   90 (246)
T ss_pred             EEEecCC
Confidence            9999988

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.14  E-value=0.0012  Score=53.07  Aligned_cols=73  Identities=19%  Similarity=0.400  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC---EEeeCCCCc-ccc----c---CCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD---LAIDYTKEN-IED----L---PEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~-~~~----~---~~~~dvv  218 (310)
                      -|.+|||+|+++++|++.++-...+ |-+||++-|++++++.+++..+.   .+.+-.+.+ ..+    .   -...+++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~el-gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLEL-GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHh-CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            3789999999999999988888876 88999999999999999765432   222222211 111    1   1257888


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      ++++|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            88887

>PRK14967 putative methyltransferase; Provisional

Probab=97.11  E-value=0.028  Score=46.94  Aligned_cols=130  Identities=22%  Similarity=0.257  Sum_probs=79.5

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE-EeeCCCCcccccCCCccE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL-AIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~dv  217 (310)
                      +....++++++|+-.| +|. |..+..+++. ...+++.++.+++..+.+++    .+... +++.+-... .....+|+
T Consensus        29 l~~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~  104 (223)
T PRK14967         29 LAAEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDV  104 (223)
T ss_pred             HHhcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeE
Confidence            3445678899999999 666 8888888875 23488999999988776543    33322 222221111 12347999


Q ss_pred             EEeCCC---C---------------------------hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHH
Q 021628          218 VFDAVG---Q---------------------------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPY  267 (310)
Q Consensus       218 vi~~~g---~---------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  267 (310)
                      |+...+   .                           +..+.+.|+++|+++.+-...             ....+++++
T Consensus       105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~-------------~~~~~~~~~  171 (223)
T PRK14967        105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL-------------SGVERTLTR  171 (223)
T ss_pred             EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc-------------cCHHHHHHH
Confidence            987532   0                           135678999999998653211             133456677


Q ss_pred             HHcCCeeEEecCCcccchhhHH
Q 021628          268 FESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      +.+..+.......+.+++....
T Consensus       172 l~~~g~~~~~~~~~~~~~~~~~  193 (223)
T PRK14967        172 LSEAGLDAEVVASQWIPFGPVL  193 (223)
T ss_pred             HHHCCCCeEEEEeeccCccHHH
Confidence            7766655444444556665533

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.09  E-value=0.016  Score=47.38  Aligned_cols=115  Identities=21%  Similarity=0.279  Sum_probs=77.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcC-CCE--EeeCCCCc-ccccCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLG-ADL--AIDYTKEN-IEDLPEK  214 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g-~~~--~~~~~~~~-~~~~~~~  214 (310)
                      ....+.++++|+-+| +|. |..++.+++.+. +.+++.++.+++..+.++    .++ .+.  ++..+..+ .......
T Consensus        34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~  111 (198)
T PRK00377         34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK  111 (198)
T ss_pred             HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence            567888999999999 777 999999888642 357999999999887664    355 222  22222211 1122357


Q ss_pred             ccEEEeCCC--C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       215 ~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      +|.||...+  .    ++.+.+.|+|+|+++...             ...+.+..+.+.+++..+
T Consensus       112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~-------------~~~~~~~~~~~~l~~~g~  163 (198)
T PRK00377        112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDA-------------ILLETVNNALSALENIGF  163 (198)
T ss_pred             CCEEEECCCcccHHHHHHHHHHHcCCCcEEEEEe-------------ecHHHHHHHHHHHHHcCC
Confidence            999998654  2    367788999999998542             233556677777765444

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.99  E-value=0.0034  Score=53.36  Aligned_cols=75  Identities=23%  Similarity=0.365  Sum_probs=51.5

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcC----CC-EEe--eCCCC-cccc-------c
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG----AD-LAI--DYTKE-NIED-------L  211 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g----~~-~~~--~~~~~-~~~~-------~  211 (310)
                      ...+.+++|+|+++++|...+..+.. +|.+++.+.|+++|++.+. ++.    .. .++  |..+. +...       .
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~-~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLAR-RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            35678999999999999986666555 3999999999999998873 333    11 232  22221 1111       1


Q ss_pred             CCCccEEEeCCC
Q 021628          212 PEKFDVVFDAVG  223 (310)
Q Consensus       212 ~~~~dvvi~~~g  223 (310)
                      ...+|+.++++|
T Consensus        82 ~~~IdvLVNNAG   93 (265)
T COG0300          82 GGPIDVLVNNAG   93 (265)
T ss_pred             CCcccEEEECCC
Confidence            126899999987

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.98  E-value=0.018  Score=50.07  Aligned_cols=108  Identities=17%  Similarity=0.104  Sum_probs=69.4

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .+++++|+-.| +|. |.+++.+++. +..+++.++.++...+.+++.    +.. .+..............+|+|+...
T Consensus       157 ~~~g~~VLDvG-cGs-G~lai~aa~~-g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVG-CGS-GILSIAALKL-GAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeC-CCh-hHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence            46789999999 777 8888877764 345899999998887776542    221 111111101111235799998764


Q ss_pred             C-C-----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628          223 G-Q-----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG  271 (310)
Q Consensus       223 g-~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (310)
                      . .     +..+.+.|+|+|.++..|.             ......++.+.+.++
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sgi-------------~~~~~~~v~~~~~~~  275 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSGI-------------LETQAQSVCDAYEQG  275 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEeC-------------cHhHHHHHHHHHHcc
Confidence            3 1     2567899999999987762             234456666666665

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.96  E-value=0.015  Score=46.42  Aligned_cols=115  Identities=20%  Similarity=0.223  Sum_probs=77.5

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dv  217 (310)
                      ...++++|+.++=.|+  +.|..+++++..-...+++++++++++.+..+    +||.+.  ++..+.+..-.....+|.
T Consensus        28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~~~da  105 (187)
T COG2242          28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLPSPDA  105 (187)
T ss_pred             HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCCCCCE
Confidence            4678899998877773  34666777775433569999999999988774    588663  344433322111226888


Q ss_pred             EEeCCC-C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          218 VFDAVG-Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       218 vi~~~g-~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      +|---| +    ++.+|..|+++||+|.-.             ..-+....+++.+++...
T Consensus       106 iFIGGg~~i~~ile~~~~~l~~ggrlV~na-------------itlE~~~~a~~~~~~~g~  153 (187)
T COG2242         106 IFIGGGGNIEEILEAAWERLKPGGRLVANA-------------ITLETLAKALEALEQLGG  153 (187)
T ss_pred             EEECCCCCHHHHHHHHHHHcCcCCeEEEEe-------------ecHHHHHHHHHHHHHcCC
Confidence            885533 3    489999999999998664             234556666677776555

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.95  E-value=0.0028  Score=54.29  Aligned_cols=93  Identities=29%  Similarity=0.397  Sum_probs=71.0

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCC-EEeeCCCCcccccCCCccEEEeCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKENIEDLPEKFDVVFDAV---  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~dvvi~~~---  222 (310)
                      +.++ +|.|+| .|.+|.-|+.+|..+ |++|++.+.|.+|++.+.. ++.+ .++-+....+.+....+|++|.++   
T Consensus       166 V~~~-kv~iiG-GGvvgtnaAkiA~gl-gA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIp  242 (371)
T COG0686         166 VLPA-KVVVLG-GGVVGTNAAKIAIGL-GADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIP  242 (371)
T ss_pred             CCCc-cEEEEC-CccccchHHHHHhcc-CCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEec
Confidence            3444 466777 799999999999997 9999999999999999966 4443 333333344555567899999875   


Q ss_pred             C------ChHHHHhhcccCCEEEEEeC
Q 021628          223 G------QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       223 g------~~~~~~~~l~~~G~~v~~g~  243 (310)
                      |      ..++.++.|.|++.++.+..
T Consensus       243 gakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         243 GAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             CCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            3      13888999999999998853

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.93  E-value=0.011  Score=48.63  Aligned_cols=100  Identities=25%  Similarity=0.311  Sum_probs=64.1

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHH----HHcCCCEE--eeCCCCcccccC
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLL----RSLGADLA--IDYTKENIEDLP  212 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~----~~~g~~~~--~~~~~~~~~~~~  212 (310)
                      .+++...++||++||-.|  ++.|..++.+++.. |.  +|+.+..+++-.+.+    +.++.+.+  +..+........
T Consensus        63 ~~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lv-g~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~  139 (209)
T PF01135_consen   63 RMLEALDLKPGDRVLEIG--TGSGYQAALLAHLV-GPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEE  139 (209)
T ss_dssp             HHHHHTTC-TT-EEEEES---TTSHHHHHHHHHH-STTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG
T ss_pred             HHHHHHhcCCCCEEEEec--CCCcHHHHHHHHhc-CccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccC
Confidence            355777899999999998  56788888888876 54  577777777654444    44565422  222211111123


Q ss_pred             CCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          213 EKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       213 ~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..+|.|+-+.+  . +...++.|++||+++..-.
T Consensus       140 apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~  173 (209)
T PF01135_consen  140 APFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG  173 (209)
T ss_dssp             -SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred             CCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence            47999998766  2 4788899999999997543

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.91  E-value=0.01  Score=43.35  Aligned_cols=90  Identities=30%  Similarity=0.419  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c---C--CCE-EeeCCCCcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L---G--ADL-AIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~---g--~~~-~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ||++||-+| + +.|..+..+++...+.+++.++.+++..+.+++ .   +  ... ++..+-.........+|+|+...
T Consensus         1 p~~~vLDlG-c-G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~   78 (112)
T PF12847_consen    1 PGGRVLDLG-C-GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG   78 (112)
T ss_dssp             TTCEEEEET-T-TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred             CCCEEEEEc-C-cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence            688999998 4 458888888884358899999999998888853 2   2  121 22222101122345799999876


Q ss_pred             -C-C-----------hHHHHhhcccCCEEEEE
Q 021628          223 -G-Q-----------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 -g-~-----------~~~~~~~l~~~G~~v~~  241 (310)
                       . .           ++...+.|+|+|+++..
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence             2 1           36788899999999853

...

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.91  E-value=0.0088  Score=50.16  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=37.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+++|+|+|++|.+|..+++.+... |++|+.+++++++.+.+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   45 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKE-GAQVCINSRNENKLKRM   45 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999999998885 99999999988877665

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.79  E-value=0.022  Score=50.16  Aligned_cols=97  Identities=25%  Similarity=0.311  Sum_probs=66.4

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHH----HcCCCEEe--eCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADLAI--DYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~~~~  213 (310)
                      .++...++++++||.+| +| .|..++.+++.. +.  .|+.++.+++..+.++    +.|.+.+.  ..+.........
T Consensus        72 ll~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~-~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~  148 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIG-GG-TGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFA  148 (322)
T ss_pred             HHHhcCCCCCCEEEEEe-CC-ccHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccC
Confidence            34566788999999999 65 599999999874 53  5888888988766553    35654322  221111111124


Q ss_pred             CccEEEeCCCC---hHHHHhhcccCCEEEEE
Q 021628          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~  241 (310)
                      .+|+|+.+.+.   ....++.|+++|+++..
T Consensus       149 ~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        149 PYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            69999988772   36778999999998864

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.73  E-value=0.015  Score=45.55  Aligned_cols=90  Identities=19%  Similarity=0.300  Sum_probs=60.6

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      ..-.|.+++|.| -|.+|...++.++.+ |++|++++.++-+.-.+.--|... .     ...+.....|++|.++|.  
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~-Ga~V~V~e~DPi~alqA~~dGf~v-~-----~~~~a~~~adi~vtaTG~~~   90 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGL-GARVTVTEIDPIRALQAAMDGFEV-M-----TLEEALRDADIFVTATGNKD   90 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHT-T-EEEEE-SSHHHHHHHHHTT-EE-E------HHHHTTT-SEEEE-SSSSS
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhC-CCEEEEEECChHHHHHhhhcCcEe-c-----CHHHHHhhCCEEEECCCCcc
Confidence            456799999999 999999999999996 999999999998876665555432 1     123345678999999984  


Q ss_pred             --hHHHHhhcccCCEEEEEeCC
Q 021628          225 --CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~  244 (310)
                        ..+-++.|+++..+...|..
T Consensus        91 vi~~e~~~~mkdgail~n~Gh~  112 (162)
T PF00670_consen   91 VITGEHFRQMKDGAILANAGHF  112 (162)
T ss_dssp             SB-HHHHHHS-TTEEEEESSSS
T ss_pred             ccCHHHHHHhcCCeEEeccCcC
Confidence              25778888877777666643

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.73  E-value=0.046  Score=40.58  Aligned_cols=97  Identities=22%  Similarity=0.344  Sum_probs=65.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCC--EEeeCCCCc-ccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD--LAIDYTKEN-IEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~--~~~~~~~~~-~~~~~~~~d  216 (310)
                      ....+.++++|+-+| +|. |..+..+++...+.+++.++.++...+.++    +++..  .++..+... .......+|
T Consensus        13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   90 (124)
T TIGR02469        13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD   90 (124)
T ss_pred             HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence            445667788999999 655 999999998743468899999988877764    33332  222222111 112235799


Q ss_pred             EEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+...+  .    ++.+.+.|+++|+++...
T Consensus        91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            9987643  2    478889999999998653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.67  E-value=0.014  Score=53.62  Aligned_cols=148  Identities=19%  Similarity=0.258  Sum_probs=92.3

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCeeEee--------cCccccCCCCCCCcceeEEEEecCcccc---C-CCCCChhhh
Q 021628           62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGD--------INEKALDHPKRNGSLAEYTAVEENLLAL---K-PKNLSFVEA  129 (310)
Q Consensus        62 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~a  129 (310)
                      ..-|.++++.+.+|+++.++.-+|+.-++-        ....+.-+....+.|++++.++. .+..   | +..++...+
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~  166 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA  166 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence            346889999999999998876666654310        00122223334567888776655 2222   2 222222221


Q ss_pred             ccccchHHHHH-HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHH-HHHHcCCCEEeeCCCC
Q 021628          130 ASLPLATETAY-EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLD-LLRSLGADLAIDYTKE  206 (310)
Q Consensus       130 a~~~~~~~ta~-~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~  206 (310)
                               |. .+.+.....++++|+|+| +|.+|.++++.++.. | .+++++.++.++.. .+++++... +..  +
T Consensus       167 ---------Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~-G~~~V~v~~rs~~ra~~la~~~g~~~-i~~--~  232 (417)
T TIGR01035       167 ---------AVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRK-GVGKILIANRTYERAEDLAKELGGEA-VKF--E  232 (417)
T ss_pred             ---------HHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCeE-eeH--H
Confidence                     11 112333446789999999 799999999998885 7 67889999888755 556677532 222  1


Q ss_pred             cccccCCCccEEEeCCCC
Q 021628          207 NIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       207 ~~~~~~~~~dvvi~~~g~  224 (310)
                      +..+...++|+||+|+++
T Consensus       233 ~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       233 DLEEYLAEADIVISSTGA  250 (417)
T ss_pred             HHHHHHhhCCEEEECCCC
Confidence            223334589999999874

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.64  E-value=0.069  Score=44.22  Aligned_cols=98  Identities=19%  Similarity=0.223  Sum_probs=65.1

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~  213 (310)
                      .+....++++++||-.|  .+.|..+..+++.. +  .+|+.++.+++-.+.+++    .+...  ++..+.........
T Consensus        68 ~~~~l~~~~g~~VLdIG--~GsG~~t~~la~~~-~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~  144 (212)
T PRK13942         68 MCELLDLKEGMKVLEIG--TGSGYHAAVVAEIV-GKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENA  144 (212)
T ss_pred             HHHHcCCCCcCEEEEEC--CcccHHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCC
Confidence            34567789999999998  45677777777764 4  588999999887766643    44322  22222111111234


Q ss_pred             CccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628          214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       214 ~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g  242 (310)
                      .+|+|+-...  . ....++.|+++|+++..-
T Consensus       145 ~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~  176 (212)
T PRK13942        145 PYDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV  176 (212)
T ss_pred             CcCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence            7999876543  2 367889999999998753

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.62  E-value=0.012  Score=53.21  Aligned_cols=96  Identities=24%  Similarity=0.368  Sum_probs=66.9

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeC--
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDA--  221 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~--  221 (310)
                      +...+++|++||-+| + +.|..+..+++.. +++|+.++.+++..+.+++......++....+.....+.+|.|+..  
T Consensus       161 ~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~-g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~l~~~fD~Ivs~~~  237 (383)
T PRK11705        161 RKLQLKPGMRVLDIG-C-GWGGLARYAAEHY-GVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRDLNGQFDRIVSVGM  237 (383)
T ss_pred             HHhCCCCCCEEEEeC-C-CccHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhhcCCCCCEEEEeCc
Confidence            567789999999999 5 5788888888874 8999999999999998865432111111111222223568988754  


Q ss_pred             ---CCC------hHHHHhhcccCCEEEEEe
Q 021628          222 ---VGQ------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       222 ---~g~------~~~~~~~l~~~G~~v~~g  242 (310)
                         +|.      ++.+.+.|+|+|+++...
T Consensus       238 ~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        238 FEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             hhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence               231      367778999999998764

>PRK12742 oxidoreductase; Provisional

Probab=96.57  E-value=0.019  Score=48.01  Aligned_cols=73  Identities=25%  Similarity=0.403  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH-HHcCCCEE-eeCCCCc-cc---ccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL-RSLGADLA-IDYTKEN-IE---DLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~-~~---~~~~~~dvvi~~~  222 (310)
                      .+++++|+|++|.+|...++.+... |++++++.+ ++++.+.+ ++++...+ .+..+.. ..   .....+|++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTD-GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            4789999999999999988887774 998887755 55555544 44554322 2221111 11   1123589999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        84 g   84 (237)
T PRK12742         84 G   84 (237)
T ss_pred             C
Confidence            6

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.47  E-value=0.034  Score=46.58  Aligned_cols=99  Identities=25%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~dv  217 (310)
                      .....++|++||=.+  ++.|-.|..+++.....+|++++-+++-++.+++    .+..  ..+..+.+.+....+.||+
T Consensus        45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~  122 (238)
T COG2226          45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDA  122 (238)
T ss_pred             HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCE
Confidence            345666899998875  7789999999998644689999999999888854    2222  1233444444444568999


Q ss_pred             EEeCCC-----C----hHHHHhhcccCCEEEEEeCC
Q 021628          218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (310)
                      |..+.|     +    +++..+.|+|+|+++.....
T Consensus       123 vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         123 VTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             EEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence            988877     1    47899999999999888643

>PRK07574 formate dehydrogenase; Provisional

Probab=96.38  E-value=0.03  Score=50.62  Aligned_cols=86  Identities=21%  Similarity=0.271  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC----  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~----  225 (310)
                      .|.+|.|+| .|.+|...++.++. +|.+|++.+++....+..+.++....     .++.+....+|+|+.+.+..    
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~-fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKP-FDVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhcCCEEEEcCCCCHHHH
Confidence            567999999 99999999999998 49999999987644444444543211     13445556889999888621    


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          ...+..|+++..+|.++
T Consensus       264 ~li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECC
Confidence                56788999999888886

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.38  E-value=0.078  Score=45.50  Aligned_cols=98  Identities=26%  Similarity=0.432  Sum_probs=68.9

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +..+++||++||=+| +| =|.+++-.|+. +|.+|+.++.|+++.+.+++    .|...-+...-.+..+..+.||-|+
T Consensus        66 ~kl~L~~G~~lLDiG-CG-WG~l~~~aA~~-y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~e~fDrIv  142 (283)
T COG2230          66 EKLGLKPGMTLLDIG-CG-WGGLAIYAAEE-YGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFEEPFDRIV  142 (283)
T ss_pred             HhcCCCCCCEEEEeC-CC-hhHHHHHHHHH-cCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccccccceee
Confidence            689999999999998 44 47788888888 59999999999998877754    4532111111122333344588776


Q ss_pred             e-----CCCC------hHHHHhhcccCCEEEEEeCC
Q 021628          220 D-----AVGQ------CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       220 ~-----~~g~------~~~~~~~l~~~G~~v~~g~~  244 (310)
                      .     .+|.      +..+-++|+++|++......
T Consensus       143 SvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         143 SVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             ehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            3     3442      37888999999999987643

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.014  Score=50.91  Aligned_cols=73  Identities=29%  Similarity=0.393  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--CE-E--eeCCCCc-cc-------ccCCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DL-A--IDYTKEN-IE-------DLPEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~-~--~~~~~~~-~~-------~~~~~~  215 (310)
                      .|.+++|+|++|++|.+.++.+... |++|+++.+++++++.+ ++++.  .. .  .|..+.+ ..       .....+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHAR-GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888774 99999999998887665 44542  11 1  2222111 10       012468


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++|+++|
T Consensus        87 d~vI~nAG   94 (296)
T PRK05872         87 DVVVANAG   94 (296)
T ss_pred             CEEEECCC
Confidence            99999987

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.33  E-value=0.0082  Score=56.58  Aligned_cols=79  Identities=20%  Similarity=0.252  Sum_probs=54.5

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c--------CC-----CEEe--eCCC-C
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L--------GA-----DLAI--DYTK-E  206 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~--------g~-----~~~~--~~~~-~  206 (310)
                      ...+.+.|.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+.+ +        |.     ..++  +..+ +
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~-G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e  151 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD  151 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence            3566778999999999999999988877774 9999999999888765422 1        11     1122  2222 1


Q ss_pred             cccccCCCccEEEeCCC
Q 021628          207 NIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       207 ~~~~~~~~~dvvi~~~g  223 (310)
                      ++....+++|+||+++|
T Consensus       152 sI~~aLggiDiVVn~AG  168 (576)
T PLN03209        152 QIGPALGNASVVICCIG  168 (576)
T ss_pred             HHHHHhcCCCEEEEccc
Confidence            12223458999999986

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.32  E-value=0.011  Score=47.45  Aligned_cols=88  Identities=26%  Similarity=0.282  Sum_probs=60.7

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc---cccCCCccEEEeCCCC------
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI---EDLPEKFDVVFDAVGQ------  224 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~dvvi~~~g~------  224 (310)
                      |+|+|++|.+|...++.+... +.+|++++|++++.+.  ..+.+ ++..+-.+.   .....++|.||.+.|.      
T Consensus         1 I~V~GatG~vG~~l~~~L~~~-~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~   76 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRR-GHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVD   76 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT-TSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHH
T ss_pred             eEEECCCChHHHHHHHHHHHC-CCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhhhhcchhhhhhhhhccccc
Confidence            789999999999999988885 8999999999998876  33333 333322222   2334589999999873      


Q ss_pred             -hHHHHhhcccC--CEEEEEeCCC
Q 021628          225 -CDKALKAVKEG--GRVVSIIGSV  245 (310)
Q Consensus       225 -~~~~~~~l~~~--G~~v~~g~~~  245 (310)
                       ....++.+...  .+++.++...
T Consensus        77 ~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   77 AAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccceeeeccc
Confidence             24444444333  4777776543

...

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.25  E-value=0.018  Score=46.96  Aligned_cols=73  Identities=29%  Similarity=0.371  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-Hc----CCCEE-eeCCC-CcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL----GADLA-IDYTK-ENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~----g~~~~-~~~~~-~~~~~~~~~~dvvi~~~  222 (310)
                      .+.+++|+|++|.+|...+..+... |.+++++.++.++.+.+. ++    +.... .+..+ ++......++|+||.++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~-g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLARE-GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            5679999998899999887777664 889999999888776653 23    22211 11111 11223345789999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus       106 ~  106 (194)
T cd01078         106 A  106 (194)
T ss_pred             C
Confidence            6

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08317 hypothetical protein; Provisional

Probab=96.25  E-value=0.07  Score=44.64  Aligned_cols=98  Identities=24%  Similarity=0.299  Sum_probs=66.1

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCcc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~d  216 (310)
                      ++...+.++++||-+| +|. |..+..+++.. .+.+++.++.+++.++.+++.    +.. .+...+..........+|
T Consensus        12 ~~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   89 (241)
T PRK08317         12 FELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFD   89 (241)
T ss_pred             HHHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCce
Confidence            3567788999999999 655 88888888874 135889999999888877653    111 122222122222235689


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     +    +..+.+.|+++|.++...
T Consensus        90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            8875421     2    378889999999998765

>PLN03139 formate dehydrogenase; Provisional

Probab=96.25  E-value=0.033  Score=50.32  Aligned_cols=106  Identities=20%  Similarity=0.270  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++....+..++.|....     .++.+....+|+|+.+.+.     
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~af-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPF-NCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHC-CCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhhCCEEEEeCCCCHHHH
Confidence            578999999 999999999999984 9999998877544444445553221     1344455678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|+++..+|.++.-            .--+-+++++.+.+|++.
T Consensus       271 ~li~~~~l~~mk~ga~lIN~aRG------------~iVDe~AL~~AL~sG~l~  311 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNARG------------AIMDTQAVADACSSGHIG  311 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECCCC------------chhhHHHHHHHHHcCCce
Confidence              1 5678899999988888631            112344556666666664

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.021  Score=49.44  Aligned_cols=91  Identities=25%  Similarity=0.379  Sum_probs=59.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh-
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~-  225 (310)
                      ..+.+++|+| +|++|.+++..+... | .+|+++.++.++.+.+ ++++....+.. ..+.......+|+||+|++.- 
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~-g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~  197 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDL-GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM  197 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence            4567899999 799999999988875 8 6899999998887666 34432110111 111123345799999997621 


Q ss_pred             -------HHHHhhcccCCEEEEEe
Q 021628          226 -------DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 -------~~~~~~l~~~G~~v~~g  242 (310)
                             .....++++...++.+-
T Consensus       198 ~~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        198 SGELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEee
Confidence                   12235666666666664

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.026  Score=47.45  Aligned_cols=73  Identities=32%  Similarity=0.479  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEE-eeCCCCc-cc---ccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLA-IDYTKEN-IE---DLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~-~~~~~~~-~~---~~~~~~dvvi~~~g  223 (310)
                      .+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+. +.+...+ .+..+.. ..   +...++|++|++.|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQR-GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            5689999999999999999988875 999999999888776653 3443322 2322211 11   11236899998876

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.024  Score=50.34  Aligned_cols=73  Identities=26%  Similarity=0.488  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCE-Ee--eCCCC-cccc-------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AI--DYTKE-NIED-------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~--~~~~~-~~~~-------~~~~  214 (310)
                      .+++++|+|+++++|.+.++.+... |++|+++.+++++++.+    ++.+.+. ++  |..+. +...       ...+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~-G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARR-GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5689999999999999988887774 99999999998887654    2345432 22  22221 1111       1246


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        85 iD~lVnnAG   93 (330)
T PRK06139         85 IDVWVNNVG   93 (330)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.15  E-value=0.02  Score=53.80  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=53.3

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +.+|++|+|+| .|..|++++.+++.. |++|++.+.++++.+.+++.|...+...+.   .+....+|+|+.+.|
T Consensus         9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~-G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~---~~~l~~~D~VV~SpG   79 (488)
T PRK03369          9 LLPGAPVLVAG-AGVTGRAVLAALTRF-GARPTVCDDDPDALRPHAERGVATVSTSDA---VQQIADYALVVTSPG   79 (488)
T ss_pred             ccCCCeEEEEc-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHhCCCEEEcCcch---HhHhhcCCEEEECCC
Confidence            45789999999 999999999999995 999999988777776677777744322221   112246799998877

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.025  Score=48.71  Aligned_cols=71  Identities=18%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEEeCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVFDAV  222 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi~~~  222 (310)
                      ++++|+|++|.+|...++.+... |++|+++++++++.+.+.+.+...+ .|..+. ....       ...++|++|+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAA-GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999988887774 9999999999888777665554332 233221 1111       124689999998


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.13  E-value=0.12  Score=42.52  Aligned_cols=98  Identities=16%  Similarity=0.115  Sum_probs=64.4

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCC---EEeeCCCCcccccCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGAD---LAIDYTKENIEDLPEK  214 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~  214 (310)
                      ++...++++++||-.| + +.|..+..+++... +.+|+.++.+++..+.++    +.+..   .++..+-.........
T Consensus        65 ~~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~~~  142 (205)
T PRK13944         65 CELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKHAP  142 (205)
T ss_pred             HHhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccCCC
Confidence            4566788999999998 3 45778877777642 357899999988766554    34432   2233222111112347


Q ss_pred             ccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       215 ~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+|+.+..  . .+...+.|+++|+++..-
T Consensus       143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence            999987654  3 477889999999997643

>PRK06182 short chain dehydrogenase; Validated

Probab=96.10  E-value=0.03  Score=48.11  Aligned_cols=73  Identities=27%  Similarity=0.393  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEEe
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVFD  220 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi~  220 (310)
                      .+.+++|+|++|.+|...++.+... |.+|+++++++++++.+.+.+...+ .|..+. +...       ...++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQ-GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3678999999999999988887774 9999999999888776654443322 232221 1111       1237899999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      ++|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.034  Score=47.95  Aligned_cols=73  Identities=21%  Similarity=0.363  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCc-c----cc----cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-I----ED----LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~----~~----~~~~~dvvi  219 (310)
                      .+.+|+|+|++|.+|...++.+... |.+|+++++++++++.+.+.+...+ .|..+.. .    ..    ....+|++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~-G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSD-GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4678999999999999988877774 9999999999988887766554332 2322211 1    11    113689999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.031  Score=47.46  Aligned_cols=73  Identities=22%  Similarity=0.375  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCc-ccc-------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKEN-IED-------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~-~~~-------~~~~~dvvi  219 (310)
                      .|++|+|+|++|.+|...++.+... |++|+++++++.+.+.. ++++...+ .+..++. ...       ...++|++|
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAE-GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999999999999999888774 99999999987776554 34443221 2322211 110       123679999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      .++|
T Consensus        85 ~~ag   88 (255)
T PRK06057         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            8875

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.03  E-value=0.21  Score=41.36  Aligned_cols=98  Identities=21%  Similarity=0.226  Sum_probs=64.1

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~  213 (310)
                      +++...++++++||-+|  .+.|..+..+++.. +.  +|+.++.+++..+.++    +++.+.  ++..+.........
T Consensus        69 ~~~~l~~~~~~~VLDiG--~GsG~~a~~la~~~-~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~  145 (215)
T TIGR00080        69 MTELLELKPGMKVLEIG--TGSGYQAAVLAEIV-GRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLA  145 (215)
T ss_pred             HHHHhCCCCcCEEEEEC--CCccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccC
Confidence            44566789999999998  45677778888864 43  5889998888776664    345432  22222111111234


Q ss_pred             CccEEEeCCC---ChHHHHhhcccCCEEEEEe
Q 021628          214 KFDVVFDAVG---QCDKALKAVKEGGRVVSII  242 (310)
Q Consensus       214 ~~dvvi~~~g---~~~~~~~~l~~~G~~v~~g  242 (310)
                      .+|+|+-...   -....++.|+++|+++..-
T Consensus       146 ~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~  177 (215)
T TIGR00080       146 PYDRIYVTAAGPKIPEALIDQLKEGGILVMPV  177 (215)
T ss_pred             CCCEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence            7998875532   2467889999999998654

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.02  E-value=0.11  Score=44.26  Aligned_cols=92  Identities=21%  Similarity=0.215  Sum_probs=62.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG--  223 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g--  223 (310)
                      ...++++||-+| +|. |..+..+++.  +.+++.++.+++.++.+++... ...+..+-+........+|+|+....  
T Consensus        39 ~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~~~~~~fD~V~s~~~l~  114 (251)
T PRK10258         39 PQRKFTHVLDAG-CGP-GWMSRYWRER--GSQVTALDLSPPMLAQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQ  114 (251)
T ss_pred             CccCCCeEEEee-CCC-CHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCcCCCCcEEEEEECchhh
Confidence            345678899998 665 7777777653  7899999999999888866432 22222222222222346999987643  


Q ss_pred             ---C----hHHHHhhcccCCEEEEEe
Q 021628          224 ---Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ---~----~~~~~~~l~~~G~~v~~g  242 (310)
                         .    +.++.+.|+|+|.++...
T Consensus       115 ~~~d~~~~l~~~~~~Lk~gG~l~~~~  140 (251)
T PRK10258        115 WCGNLSTALRELYRVVRPGGVVAFTT  140 (251)
T ss_pred             hcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence               1    367788999999998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.023  Score=48.25  Aligned_cols=43  Identities=33%  Similarity=0.462  Sum_probs=36.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.+.+++|+|++|.+|...+..+... |++|+++.+++++++.+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   49 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQA-GAKVVLASRRVERLKEL   49 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988888775 99999999988876555

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.037  Score=47.52  Aligned_cols=72  Identities=25%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe--eCCCCc-c-------cccCCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTKEN-I-------EDLPEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~~~-~-------~~~~~~~dvvi  219 (310)
                      +.+++|+|++|++|...++.+... |++|+++++++++++.+ ++++....+  |..+.+ .       .....++|++|
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAAL-GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999988876664 99999999998887655 344411222  222211 1       01124689999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        84 ~~ag   87 (273)
T PRK07825         84 NNAG   87 (273)
T ss_pred             ECCC
Confidence            9886

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.95  E-value=0.11  Score=42.08  Aligned_cols=93  Identities=28%  Similarity=0.370  Sum_probs=61.8

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccEEEe
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      .++++++|+-+|  .+.|..+..+++...+.+|+.++.+++..+.++    +.+.+.  +...+.++... .+.+|+|+.
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~  118 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTS  118 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEE
Confidence            345689999998  345677777776534678999999988776664    344432  22222222222 457999986


Q ss_pred             CC-CC----hHHHHhhcccCCEEEEEe
Q 021628          221 AV-GQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       221 ~~-g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .. +.    ++.+.+.|+++|+++.+-
T Consensus       119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        119 RAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            53 33    367889999999999774

>PRK04148 hypothetical protein; Provisional

Probab=95.91  E-value=0.054  Score=41.06  Aligned_cols=73  Identities=15%  Similarity=0.166  Sum_probs=49.7

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ...+.++++.| .| .|...+..++.+ |.+|++++.+++..+.+++.+.+.+.+---+.-.+.-+++|+++.+..
T Consensus        14 ~~~~~kileIG-~G-fG~~vA~~L~~~-G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp   86 (134)
T PRK04148         14 KGKNKKIVELG-IG-FYFKVAKKLKES-GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP   86 (134)
T ss_pred             cccCCEEEEEE-ec-CCHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC
Confidence            34568899999 88 887444444454 999999999999998888877654432110111122357899988875

>PRK06196 oxidoreductase; Provisional

Probab=95.90  E-value=0.04  Score=48.53  Aligned_cols=73  Identities=16%  Similarity=0.306  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccc----------cCCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED----------LPEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~----------~~~~~dvv  218 (310)
                      .+.+|+|+|++|++|.+.+..+... |.+|+++.+++++.+.+ .++..-..+..+-.+...          ...++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~-G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQA-GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4679999999999999988877664 99999999988776544 333211222211111111          12468999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus       104 i~nAg  108 (315)
T PRK06196        104 INNAG  108 (315)
T ss_pred             EECCC
Confidence            99876

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.84  E-value=0.049  Score=46.48  Aligned_cols=43  Identities=30%  Similarity=0.468  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .+.+++|+|+++++|...+..+... |++|+++++++++.+.+.
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~   47 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAE-GARVAVLERSAEKLASLR   47 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence            4689999999999999988877774 999999999888776664

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.84  E-value=0.013  Score=46.47  Aligned_cols=89  Identities=19%  Similarity=0.277  Sum_probs=61.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCCCh----
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQC----  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g~~----  225 (310)
                      +|.|+|++|.+|..-++-|+.. |-.|++++++++|....+...   ++..+-.+   ..+...|+|+||++.+..    
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~---i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVT---ILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhC-CCeeEEEEeChHhccccccce---eecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            5789999999999999999985 999999999999886542221   22221111   234456999999997621    


Q ss_pred             --------HHHHhhccc--CCEEEEEeCCC
Q 021628          226 --------DKALKAVKE--GGRVVSIIGSV  245 (310)
Q Consensus       226 --------~~~~~~l~~--~G~~v~~g~~~  245 (310)
                              +..+..|+.  --|+..+|+..
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence                    234555554  26788887654

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.03  Score=47.52  Aligned_cols=71  Identities=23%  Similarity=0.309  Sum_probs=45.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHHHHHHcCCCEEe--eCCC-CcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLLRSLGADLAI--DYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +.+++|+|++|++|...++.+... |++|+++.+++ ++.+... .+....+  +..+ ++.....+++|++|+++|
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~-G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG   88 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAK-GAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQLASLDVLILNHG   88 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence            679999999999999988877664 99999998876 3222211 1111222  2221 112222346899999886

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.83  E-value=0.34  Score=39.11  Aligned_cols=113  Identities=24%  Similarity=0.294  Sum_probs=71.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~dv  217 (310)
                      ....+.++++||=+| +| .|..+..+++...+.+++.++.+++..+.+++    ++...  ++..+..  ......+|+
T Consensus        25 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~--~~~~~~~D~  100 (187)
T PRK08287         25 SKLELHRAKHLIDVG-AG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP--IELPGKADA  100 (187)
T ss_pred             HhcCCCCCCEEEEEC-Cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch--hhcCcCCCE
Confidence            455677889999888 44 47878888776324689999999987776643    33221  2222111  112346899


Q ss_pred             EEeCC--CC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          218 VFDAV--GQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       218 vi~~~--g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      |+...  +.    +..+.+.|+++|+++...             .......++.+++.+..+
T Consensus       101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~-------------~~~~~~~~~~~~l~~~g~  149 (187)
T PRK08287        101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF-------------ILLENLHSALAHLEKCGV  149 (187)
T ss_pred             EEECCCccCHHHHHHHHHHhcCCCeEEEEEE-------------ecHhhHHHHHHHHHHCCC
Confidence            98653  22    367889999999997642             122345566667766554

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=95.80  E-value=0.052  Score=37.96  Aligned_cols=78  Identities=28%  Similarity=0.305  Sum_probs=54.4

Q ss_pred             chHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE---EeeCCCCcccccCCCccEEEeCCC--C-------hHHHH
Q 021628          162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AIDYTKENIEDLPEKFDVVFDAVG--Q-------CDKAL  229 (310)
Q Consensus       162 ~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~dvvi~~~g--~-------~~~~~  229 (310)
                      +.|..+..+++. .+.+++.++.+++..+.+++.....   +...+..++....+.+|+|+....  .       ++++.
T Consensus         6 G~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~~~~~~~~~l~e~~   84 (95)
T PF08241_consen    6 GTGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPFPDNSFDVVFSNSVLHHLEDPEAALREIY   84 (95)
T ss_dssp             TTSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-TT-EEEEEEESHGGGSSHHHHHHHHHH
T ss_pred             cCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCccccccccccccccceeeccCHHHHHHHHH
Confidence            478999999998 5889999999999988887654222   333333344334567999987643  1       37899


Q ss_pred             hhcccCCEEEE
Q 021628          230 KAVKEGGRVVS  240 (310)
Q Consensus       230 ~~l~~~G~~v~  240 (310)
                      +.|+|+|+++.
T Consensus        85 rvLk~gG~l~~   95 (95)
T PF08241_consen   85 RVLKPGGRLVI   95 (95)
T ss_dssp             HHEEEEEEEEE
T ss_pred             HHcCcCeEEeC
Confidence            99999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.77  E-value=0.054  Score=42.19  Aligned_cols=92  Identities=23%  Similarity=0.296  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh--
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~--  225 (310)
                      ..+.+++|+| .|.+|...+..+...++.+++++++++++.+.+ ++++...+ .....+..+..+++|+|+.|++..  
T Consensus        17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dvvi~~~~~~~~   94 (155)
T cd01065          17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGI-AIAYLDLEELLAEADLIINTTPVGMK   94 (155)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccc-ceeecchhhccccCCEEEeCcCCCCC
Confidence            4578899999 699999888877764236788888888876654 45553210 000112223356899999998631  


Q ss_pred             -----HHHHhhcccCCEEEEEe
Q 021628          226 -----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g  242 (310)
                           ......++++..++.++
T Consensus        95 ~~~~~~~~~~~~~~~~~v~D~~  116 (155)
T cd01065          95 PGDELPLPPSLLKPGGVVYDVV  116 (155)
T ss_pred             CCCCCCCCHHHcCCCCEEEEcC
Confidence                 11123455666666554

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.74  E-value=0.055  Score=47.76  Aligned_cols=104  Identities=22%  Similarity=0.286  Sum_probs=74.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.++.|+| .|.+|.+.++.++. +|.+++..++++. .+..+..+..++      ++.+..+..|++.-.++.     
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~-Fgm~v~y~~~~~~-~~~~~~~~~~y~------~l~ell~~sDii~l~~Plt~~T~  215 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKG-FGMKVLYYDRSPN-PEAEKELGARYV------DLDELLAESDIISLHCPLTPETR  215 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhc-CCCEEEEECCCCC-hHHHhhcCceec------cHHHHHHhCCEEEEeCCCChHHh
Confidence            488999999 99999999999997 6999999998765 333333444332      144555678888776651     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       +  ...++.|++++.+|.++.-.            --+-+.+++.+++|++.
T Consensus       216 hLin~~~l~~mk~ga~lVNtaRG~------------~VDe~ALi~AL~~g~i~  256 (324)
T COG1052         216 HLINAEELAKMKPGAILVNTARGG------------LVDEQALIDALKSGKIA  256 (324)
T ss_pred             hhcCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHhCCcc
Confidence             1  68889999999999886311            12345667777777765

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.049  Score=45.30  Aligned_cols=71  Identities=20%  Similarity=0.360  Sum_probs=46.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe--eCCCC-cccc----c-CCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKE-NIED----L-PEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~-~~~~----~-~~~~dvvi~~~g  223 (310)
                      .+++|+|++|.+|...+..+... |++|+++++++++.+.+++++.....  |-.+. +...    . ..++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLER-GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhC-CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47999999999999977776664 99999999988777666554322222  21111 1111    1 136889888765

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.71  E-value=0.078  Score=45.63  Aligned_cols=73  Identities=12%  Similarity=0.160  Sum_probs=49.4

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +++......+++++|+| +|+.+.+++..++.+ |+ +++++.|++++.+.+ +.++...    . +..  ....+|+||
T Consensus       113 ~L~~~~~~~~~~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~~a~~la~~~~~~~----~-~~~--~~~~~dlvI  183 (272)
T PRK12550        113 LLASYQVPPDLVVALRG-SGGMAKAVAAALRDA-GFTDGTIVARNEKTGKALAELYGYEW----R-PDL--GGIEADILV  183 (272)
T ss_pred             HHHhcCCCCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhCCcc----h-hhc--ccccCCEEE
Confidence            44433444567999999 899999988877775 76 588999998887766 3443211    0 011  123589999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +|++
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9975

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.71  E-value=0.037  Score=48.02  Aligned_cols=72  Identities=19%  Similarity=0.180  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCC-EEeeCCC-CcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD-LAIDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+++|+| +|+.+.+++..+..+ |+ +++++.|+.+|.+.+ ++++.. .+..... ++.......+|+||+|++
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~-G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASL-GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCC
Confidence            578999999 899999988877775 76 688889998887666 444321 1111110 111222357899999986

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02928 oxidoreductase family protein

Probab=95.66  E-value=0.062  Score=48.05  Aligned_cols=91  Identities=24%  Similarity=0.322  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-----CCEEee--CCCCcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-----ADLAID--YTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-----~~~~~~--~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .|.++.|+| .|.+|...++.++.. |.+|++.+++..+... ..++     .....+  ....++.+....+|+|+.+.
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~af-G~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPF-GVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhC-CCEEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            478999999 999999999999995 9999999876332111 1110     000000  01123444456789999987


Q ss_pred             CC------h--HHHHhhcccCCEEEEEeC
Q 021628          223 GQ------C--DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       223 g~------~--~~~~~~l~~~G~~v~~g~  243 (310)
                      +.      +  ...+..|+++..+|.++.
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR  263 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIAR  263 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence            62      1  688899999999998863

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.65  E-value=0.046  Score=47.16  Aligned_cols=90  Identities=21%  Similarity=0.320  Sum_probs=56.6

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHH-cCCCE----EeeCCCCcccccCCCccEEEeC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS-LGADL----AIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      ..+|++++|+| +|+.+.+++.-++.. | .+++++.|+.+|.+.+.+ ++...    .....  +... ...+|++|||
T Consensus       123 ~~~~~~vlilG-AGGAarAv~~aL~~~-g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~--~~~~-~~~~dliINa  197 (283)
T COG0169         123 DVTGKRVLILG-AGGAARAVAFALAEA-GAKRITVVNRTRERAEELADLFGELGAAVEAAALA--DLEG-LEEADLLINA  197 (283)
T ss_pred             ccCCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhhhccccccccccc--cccc-ccccCEEEEC
Confidence            34589999999 899999988888875 7 478888999999777743 43211    11111  1111 1158999999


Q ss_pred             CCC-h--HH-----HHhhcccCCEEEEEe
Q 021628          222 VGQ-C--DK-----ALKAVKEGGRVVSII  242 (310)
Q Consensus       222 ~g~-~--~~-----~~~~l~~~G~~v~~g  242 (310)
                      ++. .  ..     ...++++.-.+..+-
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~v  226 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDVV  226 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence            862 1  10     034555555555553

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.065  Score=46.71  Aligned_cols=42  Identities=31%  Similarity=0.476  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.++.+... |++|+++++++++++.+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~-G~~Vi~~~R~~~~l~~~   80 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARR-GATVVAVARREDLLDAV   80 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            3578999999999999988877764 99999999998876555

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.052  Score=46.38  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   50 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEA-GADVLIAARTESQLDEV   50 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988887774 99999999988776544

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.64  E-value=0.031  Score=49.29  Aligned_cols=70  Identities=24%  Similarity=0.376  Sum_probs=49.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCC-CcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +|+|+|++|-+|...+..+... |.+|++++++.++...+...+...+. +..+ .++.....++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~-g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDE-GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            6999999999999988877774 89999999987766555545543322 2222 122333468999999865

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.61  E-value=0.083  Score=46.99  Aligned_cols=104  Identities=23%  Similarity=0.244  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.+.. ....++...      .++.+.....|+|+-+.+.     
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~~~~~------~~l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGF-GMRILYYSRTRKPE-AEKELGAEY------RPLEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCChh-hHHHcCCEe------cCHHHHHhhCCEEEEeCCCChHHh
Confidence            578999999 899999999999984 99999888865443 233344321      1334445678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|+++..++.++.-.            --+-+.+.+.+.+|++.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aRg~------------~vd~~aL~~aL~~g~i~  260 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTARGK------------VVDTKALVKALKEGWIA  260 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcCch------------hcCHHHHHHHHHcCCeE
Confidence              1 57788899999988886311            11234555666666654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.59  E-value=0.044  Score=47.57  Aligned_cols=71  Identities=21%  Similarity=0.227  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC----CCEEeeCCCCcccccCCCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ..+.+|+|+| +|+.|.+++..+..+ |+ +++++.++.+|.+.+ ++++    ...+...  ++.......+|+||+|+
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~-G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTL-GVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCCCCEEEECC
Confidence            3567999999 899999988888875 76 688888988887666 3332    1122211  11122235789999996


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus       201 p  201 (284)
T PRK12549        201 P  201 (284)
T ss_pred             c
Confidence            4

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.049  Score=46.35  Aligned_cols=46  Identities=28%  Similarity=0.362  Sum_probs=38.0

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      .-++.+++|+|+.|.+|...+..+... |.+|+++++++++.+.+.+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~   53 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEA-GARVHVCDVSEAALAATAA   53 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence            357789999999999999988887774 9999999998777665543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.53  E-value=0.057  Score=46.07  Aligned_cols=44  Identities=32%  Similarity=0.469  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      .+.+++|+|+++++|...++.+... |++|+++.+++++.+.+.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~l~~   47 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAE-GARVAVLDKSAAGLQELEA   47 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh
Confidence            4789999999999999988877764 9999999998877766644

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.52  E-value=0.16  Score=40.25  Aligned_cols=95  Identities=25%  Similarity=0.272  Sum_probs=58.5

Q ss_pred             ccccchHHHHHHHHH-hcccCCCCEEEEEcCCcc-hHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc
Q 021628          130 ASLPLATETAYEGLE-RSAFSAGKSILVLGGAGG-VGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN  207 (310)
Q Consensus       130 a~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~-~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (310)
                      ...||....+...++ ...--.|.+|+|.| +|. +|..++..++.. |++++++.++.+++.                 
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG-~G~~~G~~~a~~L~~~-g~~V~v~~r~~~~l~-----------------   82 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVG-RSNIVGKPLAALLLNR-NATVTVCHSKTKNLK-----------------   82 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHhhC-CCEEEEEECCchhHH-----------------
Confidence            344554444444443 33346889999999 565 699888888875 888888887643222                 


Q ss_pred             ccccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          208 IEDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       208 ~~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                        +....+|+||.+++..+ -.-+.++++-.++.++.+.
T Consensus        83 --~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~pr  119 (168)
T cd01080          83 --EHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             --HHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCC
Confidence              12346789998887532 1112455565666666543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.49  E-value=0.087  Score=46.36  Aligned_cols=85  Identities=18%  Similarity=0.277  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC----  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~----  225 (310)
                      .|.+|.|+| .|.+|...++.++. +|.+|++.+++.++..     +.....  ...++.+....+|+|+.+.+..    
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~a-fG~~V~~~~~~~~~~~-----~~~~~~--~~~~l~e~l~~aDvvv~~lPlt~~T~  205 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQT-WGFPLRCWSRSRKSWP-----GVQSFA--GREELSAFLSQTRVLINLLPNTPETV  205 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEeCCCCCCC-----Cceeec--ccccHHHHHhcCCEEEECCCCCHHHH
Confidence            578999999 99999999999998 4999999887654321     111111  1123444556889999988621    


Q ss_pred             ----HHHHhhcccCCEEEEEeC
Q 021628          226 ----DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g~  243 (310)
                          ...++.|+++..++.++.
T Consensus       206 ~li~~~~l~~mk~ga~lIN~aR  227 (312)
T PRK15469        206 GIINQQLLEQLPDGAYLLNLAR  227 (312)
T ss_pred             HHhHHHHHhcCCCCcEEEECCC
Confidence                467889999999988863

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.057  Score=45.16  Aligned_cols=42  Identities=21%  Similarity=0.350  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAE-GYKVAITARDQKELEEA   46 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEeeCCHHHHHHH
Confidence            4688999999999999988877774 99999999988776555

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.47  E-value=0.052  Score=48.82  Aligned_cols=91  Identities=29%  Similarity=0.341  Sum_probs=61.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcC---C-CEEeeCCCC-cccccCCCccEEEeCCCCh
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG---A-DLAIDYTKE-NIEDLPEKFDVVFDAVGQC  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g---~-~~~~~~~~~-~~~~~~~~~dvvi~~~g~~  225 (310)
                      .+|||+| +|.+|..+++.+.+. + .+|++.+++.++++.+....   . ...++-.+. ...+..++.|+||+|.+..
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~-~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQN-GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            4789999 699999999976663 6 79999999999998886653   1 123333322 2333456779999998732


Q ss_pred             --HHHH-hhcccCCEEEEEeCC
Q 021628          226 --DKAL-KAVKEGGRVVSIIGS  244 (310)
Q Consensus       226 --~~~~-~~l~~~G~~v~~g~~  244 (310)
                        ..++ .|+..+=.++....+
T Consensus        80 ~~~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          80 VDLTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             hhHHHHHHHHHhCCCEEEcccC
Confidence              3444 455556566665543

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.078  Score=44.67  Aligned_cols=73  Identities=25%  Similarity=0.367  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv  217 (310)
                      ++.+++|+|++|.+|...++.+... |++++++.+++++.+.+ ++++... .+..+-.+..+          ...++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAE-GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999988877774 99999999887766554 4455332 22211111111          1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        84 vi~~ag   89 (249)
T PRK06500         84 VFINAG   89 (249)
T ss_pred             EEECCC
Confidence            998876

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.42  E-value=0.24  Score=42.21  Aligned_cols=95  Identities=21%  Similarity=0.225  Sum_probs=65.9

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      +.....+++++||=+| +|. |..+..+++...+.+++.++.++...+.+++.+.+.+. .+-.++. ....+|+|+...
T Consensus        22 l~~l~~~~~~~vLDlG-cG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d~~~~~-~~~~fD~v~~~~   97 (255)
T PRK14103         22 LARVGAERARRVVDLG-CGP-GNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GDVRDWK-PKPDTDVVVSNA   97 (255)
T ss_pred             HHhCCCCCCCEEEEEc-CCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cChhhCC-CCCCceEEEEeh
Confidence            3455667889999998 444 77888888763357899999999988888776554332 2222221 134799998764


Q ss_pred             C-----C----hHHHHhhcccCCEEEEE
Q 021628          223 G-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      .     .    +..+.+.|+|||+++..
T Consensus        98 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         98 ALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            3     2    36778889999999865

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.36  E-value=0.19  Score=44.53  Aligned_cols=93  Identities=12%  Similarity=0.148  Sum_probs=60.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HH----cCCCEEeeCCCCcccccCCCccEEEe
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RS----LGADLAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~----~g~~~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ..+...+++|+| +|..|.+.+..+....+. ++.+..+++++.+.+ ++    ++.... ..  ++..+....+|+|+.
T Consensus       123 a~~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~~~aDiVi~  198 (325)
T PRK08618        123 AREDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV--NSADEAIEEADIIVT  198 (325)
T ss_pred             cCCCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee--CCHHHHHhcCCEEEE
Confidence            334567899999 999998776544322365 566778888887655 32    233211 11  122333467999999


Q ss_pred             CCCC--hHHHHhhcccCCEEEEEeCC
Q 021628          221 AVGQ--CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~  244 (310)
                      |+++  +.-. +++++|-.++.+|.+
T Consensus       199 aT~s~~p~i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        199 VTNAKTPVFS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             ccCCCCcchH-HhcCCCcEEEecCCC
Confidence            9874  3334 889998888888764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.36  E-value=0.086  Score=45.38  Aligned_cols=37  Identities=22%  Similarity=0.206  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .++++||+|+++  ++|.+.++.+... |++|++..++++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~-Ga~V~~~~r~~~   44 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQ-GAELAFTYQGEA   44 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhC-CCEEEEecCchH
Confidence            468999999875  9999987766664 999998887653

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.058  Score=45.71  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=34.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      |.+++|+|+++++|...++.+... |++|+++.+++++.+.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~-G~~Vi~~~r~~~~~~~~   41 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEE-GANVVITGRTKEKLEEA   41 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988887774 99999999988766554

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.32  E-value=0.083  Score=45.40  Aligned_cols=41  Identities=34%  Similarity=0.602  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|..|+|+|+++++|.+ |.++++.  |++++.+++..++++.+
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v   52 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERV   52 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHH
Confidence            57899999999999977 5556664  99999999988887776

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.31  E-value=0.16  Score=40.96  Aligned_cols=110  Identities=17%  Similarity=0.151  Sum_probs=71.4

Q ss_pred             ccccchHHHHHHHHHhccc----------CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE
Q 021628          130 ASLPLATETAYEGLERSAF----------SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       130 a~~~~~~~ta~~al~~~~~----------~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      ..+||.....+..++..++          -.|++|+|.|.+..+|.=...++... ++.|++++.+.-..  ...-+  .
T Consensus        31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~-~AtVti~~~~~~~~--~~~~~--~  105 (197)
T cd01079          31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLAND-GARVYSVDINGIQV--FTRGE--S  105 (197)
T ss_pred             CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEEecCcccc--ccccc--c
Confidence            3456665555555554433          57999999999999999888888874 99999886542111  00000  0


Q ss_pred             EeeCCC--Cc----ccccCCCccEEEeCCCChHH--HHhhcccCCEEEEEeCC
Q 021628          200 AIDYTK--EN----IEDLPEKFDVVFDAVGQCDK--ALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       200 ~~~~~~--~~----~~~~~~~~dvvi~~~g~~~~--~~~~l~~~G~~v~~g~~  244 (310)
                      .-++..  .+    ..+..+.+|+||.++|..+.  --+++++|..++.+|..
T Consensus       106 ~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         106 IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             cccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence            000110  11    23445789999999996543  56789999999999853

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.061  Score=45.59  Aligned_cols=42  Identities=29%  Similarity=0.382  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++.+++++.+.+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   49 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEA-GAQVAIAARHLDALEKL   49 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776555

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.091  Score=45.26  Aligned_cols=44  Identities=25%  Similarity=0.266  Sum_probs=37.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      .+.+++|+|++|.+|.+.++.+... |.+|+++++++++.+.+.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~l~~   46 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAA-GHRVVGTVRSEAARADFEA   46 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhC-cCEEEEEeCCHHHHHHHHh
Confidence            3578999999999999988877774 9999999999888776654

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.063  Score=45.52  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEe--eCCCC-cccc-cCCCccEEEeC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAI--DYTKE-NIED-LPEKFDVVFDA  221 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~--~~~~~-~~~~-~~~~~dvvi~~  221 (310)
                      +.+++|+|++|.+|...++.+... |++|+++++++++.+.+.+    .+.. .++  +..+. .... ...++|++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARK-GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            458999999999999998888874 9999999998776655432    2322 121  22221 1111 12379999998


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus        81 ag   82 (257)
T PRK09291         81 AG   82 (257)
T ss_pred             CC
Confidence            76

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.098  Score=45.04  Aligned_cols=95  Identities=25%  Similarity=0.263  Sum_probs=65.4

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..++ -.|.+|+|.|.+..+|.-.+.++... |+.|+++-.....+                   .
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~-gAtVtv~hs~t~~l-------------------~  195 (285)
T PRK14191        136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA-GASVSVCHILTKDL-------------------S  195 (285)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCEEEEEeCCcHHH-------------------H
Confidence            456665555555555554 36999999997779999999988875 99888774432222                   2


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+|+.++|... -.-++++++..++.+|...
T Consensus       196 ~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        196 FYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINR  232 (285)
T ss_pred             HHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccc
Confidence            22356889999998532 2235678999999998543

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.25  E-value=0.12  Score=45.44  Aligned_cols=87  Identities=18%  Similarity=0.249  Sum_probs=58.5

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--h--
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--C--  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~--  225 (310)
                      .+|.|+| .|.+|...+..++.. |.  +|++.++++++.+.+++.|......   .+..+...++|+||.|++.  .  
T Consensus         7 ~~I~IIG-~G~mG~sla~~l~~~-g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIG-IGLIGSSLARAIRRL-GLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEe-eCHHHHHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcCCCEEEECCCHHHHHH
Confidence            5799999 999999888777764 63  7888899999888888877422111   1122234578999999873  1  


Q ss_pred             --HHHHhhcccCCEEEEEeC
Q 021628          226 --DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 --~~~~~~l~~~G~~v~~g~  243 (310)
                        +.....++++..++.++.
T Consensus        82 v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCcc
Confidence              233345666666666543

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.098  Score=44.57  Aligned_cols=44  Identities=32%  Similarity=0.422  Sum_probs=35.6

Q ss_pred             cCCCCEEEEEcCCc-chHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          148 FSAGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       148 ~~~g~~vlI~g~~g-~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ...+++++|+|++| ++|.+.++.+... |++|+++++++++++..
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~   58 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEE-GARVVISDIHERRLGET   58 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            34578999999876 8999999888875 99999988887766544

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.22  E-value=0.11  Score=43.58  Aligned_cols=98  Identities=22%  Similarity=0.302  Sum_probs=59.7

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~d  216 (310)
                      +....++|++||=.+  .+.|..+..+++... ..+|+.++-+++-++.+++    .+..  ..+..+.+++....+.+|
T Consensus        41 ~~~~~~~g~~vLDv~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD  118 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFD  118 (233)
T ss_dssp             HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EE
T ss_pred             hccCCCCCCEEEEeC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCcee
Confidence            445778899888886  566888888888752 2588999999998888753    2221  123333334333346799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|..+.|     +    +.+..+.|+|||+++.+..
T Consensus       119 ~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~  154 (233)
T PF01209_consen  119 AVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEF  154 (233)
T ss_dssp             EEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeec
Confidence            9998777     1    3789999999999987753

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.11  Score=44.36  Aligned_cols=73  Identities=27%  Similarity=0.323  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-Ee--eCCCC-cccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTKE-NIED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~~-~~~~-------~~~~~dv  217 (310)
                      .+.+++|+|+++.+|...+..+... |++|+++++++++.+.+ ++++... .+  |..++ +...       ....+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAA-GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999988877764 99999999988766555 4444221 22  22211 1111       1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        84 lv~~ag   89 (261)
T PRK08265         84 LVNLAC   89 (261)
T ss_pred             EEECCC
Confidence            998876

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.17  E-value=0.33  Score=41.59  Aligned_cols=97  Identities=21%  Similarity=0.219  Sum_probs=64.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHc-C------CC--EEeeCCCCcccccC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL-G------AD--LAIDYTKENIEDLP  212 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~-g------~~--~~~~~~~~~~~~~~  212 (310)
                      +...++++++||-+| +| .|..+..+++.. +  .+++.++.+++-++.+++. .      ..  ..+..+.+++....
T Consensus        67 ~~~~~~~~~~VLDlG-cG-tG~~~~~la~~~-~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~  143 (261)
T PLN02233         67 SWSGAKMGDRVLDLC-CG-SGDLAFLLSEKV-GSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDD  143 (261)
T ss_pred             HHhCCCCCCEEEEEC-Cc-CCHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCC
Confidence            445778899999998 33 356777777763 4  4899999999988877532 1      11  12222222322223


Q ss_pred             CCccEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          213 EKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       213 ~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +.+|.|+...+     +    +.++.+.|+|||+++....
T Consensus       144 ~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~  183 (261)
T PLN02233        144 CYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF  183 (261)
T ss_pred             CCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            46999986543     1    3788899999999988754

>PRK07806 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.27  Score=41.38  Aligned_cols=36  Identities=28%  Similarity=0.436  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .+.+++|+|++|.+|...+..+... |.+|+++.++.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~-G~~V~~~~r~~   40 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGA-GAHVVVNYRQK   40 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHC-CCEEEEEeCCc
Confidence            4679999999999999988877774 89999888864

>PLN02244 tocopherol O-methyltransferase

Probab=95.14  E-value=0.33  Score=43.31  Aligned_cols=92  Identities=21%  Similarity=0.230  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccEEEeC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      +++++||=+| + +.|..+..+++.. +++|+.++.+++..+.+++    .+..   .+...+..+.....+.+|+|+..
T Consensus       117 ~~~~~VLDiG-C-G~G~~~~~La~~~-g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~  193 (340)
T PLN02244        117 KRPKRIVDVG-C-GIGGSSRYLARKY-GANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSM  193 (340)
T ss_pred             CCCCeEEEec-C-CCCHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEEC
Confidence            7889999888 4 4577888888874 8899999999987766643    2321   12222222222223579999865


Q ss_pred             CC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          222 VG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..     +    +.++.+.|+|||+++....
T Consensus       194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        194 ESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             CchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            32     1    2678899999999998653

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.11  E-value=0.37  Score=41.06  Aligned_cols=95  Identities=20%  Similarity=0.250  Sum_probs=64.2

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ....++++++||=+| + +.|..+..+++...+.+++.++.+++..+.+++.... .+...+-..+. ....+|+|+...
T Consensus        25 ~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~  101 (258)
T PRK01683         25 ARVPLENPRYVVDLG-C-GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ-PPQALDLIFANA  101 (258)
T ss_pred             hhCCCcCCCEEEEEc-c-cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC-CCCCccEEEEcc
Confidence            445667889999998 3 3577788888764357899999999988887654321 22222222211 124789998664


Q ss_pred             C-----C----hHHHHhhcccCCEEEEE
Q 021628          223 G-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      .     .    +..+.+.|+++|+++..
T Consensus       102 ~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683        102 SLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             ChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            3     1    36788899999999875

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.13  Score=43.61  Aligned_cols=42  Identities=31%  Similarity=0.504  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|...+..+... |++|+++++++++++.+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~-G~~v~~~~r~~~~~~~~   46 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFARE-GAKVVVGARRQAELDQL   46 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            3679999999999999988877664 99999999988876654

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.05  E-value=0.1  Score=37.74  Aligned_cols=85  Identities=21%  Similarity=0.364  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---H
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~  226 (310)
                      .|.+|+|.| .|.+|..-++.+... |++++++....   +..++. .+    .....+.....++++|+.+.++.   +
T Consensus         6 ~~~~vlVvG-gG~va~~k~~~Ll~~-gA~v~vis~~~---~~~~~~-i~----~~~~~~~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVG-GGPVAARKARLLLEA-GAKVTVISPEI---EFSEGL-IQ----LIRREFEEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEE-ESHHHHHHHHHHCCC-TBEEEEEESSE---HHHHTS-CE----EEESS-GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCch---hhhhhH-HH----HHhhhHHHHHhhheEEEecCCCHHHHH
Confidence            578999999 799999988888884 99999998875   222211 11    11122233456899999998853   4


Q ss_pred             HHHhhcccCCEEEEEeCC
Q 021628          227 KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~  244 (310)
                      ...+..+..|.++...-.
T Consensus        76 ~i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   76 AIYADARARGILVNVVDD   93 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-
T ss_pred             HHHHHHhhCCEEEEECCC
Confidence            555666667888777543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.05  E-value=0.12  Score=43.52  Aligned_cols=73  Identities=26%  Similarity=0.358  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCC-EEeeCCCCcccc----------cCCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGAD-LAIDYTKENIED----------LPEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~-~~~~~~~~~~~~----------~~~~~d  216 (310)
                      .|.+++|+|++|.+|...+..+... |++|+++.+++..  .+.+++.+.. ..+..+-.+..+          ...++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~-G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEA-GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999988877764 9999998886521  2333444432 122211111111          124689


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++|+++|
T Consensus        83 ~li~~ag   89 (248)
T TIGR01832        83 ILVNNAG   89 (248)
T ss_pred             EEEECCC
Confidence            9998875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.11  Score=44.33  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   45 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAA-GARLLLVGRNAEKLEAL   45 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4678999999999999888877764 99999999988876655

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.31  Score=42.08  Aligned_cols=95  Identities=24%  Similarity=0.266  Sum_probs=65.7

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++... --.|.+|+|.|....+|...+.++... |+.|+++.+....+                   .
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~-gatVtv~~s~t~~l-------------------~  196 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQK-NASVTILHSRSKDM-------------------A  196 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchhH-------------------H
Confidence            45766555555555443 347999999996666999999999885 99999887643222                   2


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+||.++|... -.-++++++..++.+|...
T Consensus       197 ~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        197 SYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCc
Confidence            22457899999998531 1114678888888888654

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.00  E-value=0.067  Score=52.06  Aligned_cols=73  Identities=21%  Similarity=0.407  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh---------------------hHHHHHHcCCCEEeeCCC---
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYTK---  205 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~~---  205 (310)
                      .+++|+|+| +|+.|+.++..++.. |.+|+++.+.+.                     +.+.++++|.+..++..-   
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~-G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  386 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARA-GVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD  386 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHc-CCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc
Confidence            489999999 899999999998885 999999887652                     456667788776555421   


Q ss_pred             CcccccCCCccEEEeCCCC
Q 021628          206 ENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       206 ~~~~~~~~~~dvvi~~~g~  224 (310)
                      ..+.....++|.||.++|+
T Consensus       387 ~~~~~l~~~~DaV~latGa  405 (639)
T PRK12809        387 ITFSDLTSEYDAVFIGVGT  405 (639)
T ss_pred             CCHHHHHhcCCEEEEeCCC
Confidence            1222334579999999884

>PRK08017 oxidoreductase; Provisional

Probab=95.00  E-value=0.069  Score=45.22  Aligned_cols=71  Identities=23%  Similarity=0.378  Sum_probs=50.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCc-c----ccc----CCCccEEEeC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-I----EDL----PEKFDVVFDA  221 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~----~~~----~~~~dvvi~~  221 (310)
                      ++++|+|++|.+|...++.+... |.+|+++.+++++.+.+++.+...+ .+..+.. .    ...    ...+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR-GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            57999999999999999888875 9999999999988887776665433 2222211 0    111    1357888877


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            65

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.99  E-value=0.13  Score=45.47  Aligned_cols=42  Identities=19%  Similarity=0.291  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~   46 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKR-GWHVIMACRNLKKAEAA   46 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4678999999999999988877664 89999999988876554

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=94.99  E-value=0.017  Score=29.16  Aligned_cols=22  Identities=36%  Similarity=0.502  Sum_probs=15.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL   27 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~   27 (310)
                      |||++|.++++.    +++ ++|.|.+
T Consensus         1 MkAv~y~G~~~v----~ve-~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKDV----RVE-EVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTEE----EEE-EE----S
T ss_pred             CcceEEeCCCce----EEE-ECCCccc
Confidence            999999999987    888 8888864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.99  E-value=0.15  Score=44.00  Aligned_cols=73  Identities=21%  Similarity=0.274  Sum_probs=45.2

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChh---hHHHH-HHcCCCEEeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLL-RSLGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~---~~~~~-~~~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      .+++++|+|++  +++|.+.++.+... |++|+++.++++   +.+.+ ++++....+..+-.+..+          ...
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~-G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQ-GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999976  79999988766664 999999888742   33333 344533332221111111          124


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      .+|++|+++|
T Consensus        83 ~iDilVnnAG   92 (274)
T PRK08415         83 KIDFIVHSVA   92 (274)
T ss_pred             CCCEEEECCc
Confidence            6889888876

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.024  Score=52.67  Aligned_cols=82  Identities=26%  Similarity=0.389  Sum_probs=58.4

Q ss_pred             hcccCCCCEEE----EEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCcc-EEE
Q 021628          145 RSAFSAGKSIL----VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD-VVF  219 (310)
Q Consensus       145 ~~~~~~g~~vl----I~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d-vvi  219 (310)
                      ..+.++|++++    |+|++|++|.+++++++.. |++|+.+.+.+++....+..                  +++ +++
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~------------------~~~~~~~   88 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGL-GYDVVANNDGGLTWAAGWGD------------------RFGALVF   88 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhC-CCeeeecCccccccccCcCC------------------cccEEEE
Confidence            56778999988    8888999999999999996 99999887665533222111                  222 444


Q ss_pred             eCCC------------ChHHHHhhcccCCEEEEEeCCC
Q 021628          220 DAVG------------QCDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       220 ~~~g------------~~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      |..+            .....++.|.++|+++.++...
T Consensus        89 d~~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261         89 DATGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEcccc
Confidence            5443            1256678889999999987543

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.96  E-value=0.21  Score=43.09  Aligned_cols=95  Identities=18%  Similarity=0.219  Sum_probs=66.7

Q ss_pred             ccccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          130 ASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       130 a~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ...||+....+..++..++ -.|.+|+|.|.+..+|.-.+.++... ++.|+++...-..                   +
T Consensus       142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVtv~hs~T~~-------------------l  201 (287)
T PRK14176        142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNR-NATVSVCHVFTDD-------------------L  201 (287)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCEEEEEeccCCC-------------------H
Confidence            3457666555555665554 47999999998888999999998885 8888777643222                   2


Q ss_pred             cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      .+..+.+|+++.++|.+. -.-++++++..++.+|..
T Consensus       202 ~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin  238 (287)
T PRK14176        202 KKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHHhhCCEEEEccCCccccCHHHcCCCcEEEEeccc
Confidence            223457889999998431 233578889999999853

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.96  E-value=0.11  Score=45.69  Aligned_cols=101  Identities=21%  Similarity=0.258  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...+..++. +|.+|+..++.....    +.+..      ..++.+.....|+|.-+.+.     
T Consensus       144 ~gktvGIiG-~G~IG~~vA~~~~~-fgm~V~~~d~~~~~~----~~~~~------~~~l~ell~~sDvv~lh~Plt~~T~  211 (311)
T PRK08410        144 KGKKWGIIG-LGTIGKRVAKIAQA-FGAKVVYYSTSGKNK----NEEYE------RVSLEELLKTSDIISIHAPLNEKTK  211 (311)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhh-cCCEEEEECCCcccc----ccCce------eecHHHHhhcCCEEEEeCCCCchhh
Confidence            588999999 99999999999998 599999998753221    11111      11344455678888877651     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       +  ...++.|+++..+|.++.-.            -=+-+.+++.+++|++.
T Consensus       212 ~li~~~~~~~Mk~~a~lIN~aRG~------------vVDe~AL~~AL~~g~i~  252 (311)
T PRK08410        212 NLIAYKELKLLKDGAILINVGRGG------------IVNEKDLAKALDEKDIY  252 (311)
T ss_pred             cccCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHcCCeE
Confidence             1  68889999999999886311            01234566667777765

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.96  E-value=0.24  Score=39.05  Aligned_cols=104  Identities=19%  Similarity=0.265  Sum_probs=64.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---HH-
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---DK-  227 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~~-  227 (310)
                      .+|.++| .|.+|...+.-+... |.+|++.++++++.+.+.+.|... .+    +..+..+.+|+||-|..+.   +. 
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~g~~~-~~----s~~e~~~~~dvvi~~v~~~~~v~~v   74 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKA-GYEVTVYDRSPEKAEALAEAGAEV-AD----SPAEAAEQADVVILCVPDDDAVEAV   74 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHT-TTEEEEEESSHHHHHHHHHTTEEE-ES----SHHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhc-CCeEEeeccchhhhhhhHHhhhhh-hh----hhhhHhhcccceEeecccchhhhhh
Confidence            3688999 899998866665553 899999999999999988777322 11    2233345679999998742   22 


Q ss_pred             -----HHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          228 -----ALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       228 -----~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                           .+..+.++..++.++.            ...+..+++.+.+.+....
T Consensus        75 ~~~~~i~~~l~~g~iiid~sT------------~~p~~~~~~~~~~~~~g~~  114 (163)
T PF03446_consen   75 LFGENILAGLRPGKIIIDMST------------ISPETSRELAERLAAKGVR  114 (163)
T ss_dssp             HHCTTHGGGS-TTEEEEE-SS--------------HHHHHHHHHHHHHTTEE
T ss_pred             hhhhHHhhccccceEEEecCC------------cchhhhhhhhhhhhhccce
Confidence                 4566677777777652            3455555666666554443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=94.94  E-value=0.15  Score=44.43  Aligned_cols=91  Identities=24%  Similarity=0.257  Sum_probs=57.5

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-CEEeeCCCCcccccCCCccEEEeC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      -.++|++||=.|  .+.|.+++..++. +..+|++++.++...+.+++    -+. +.+.-....+  .....+|+|+-.
T Consensus       158 ~~~~g~~vLDvG--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~--~~~~~~dlvvAN  232 (295)
T PF06325_consen  158 YVKPGKRVLDVG--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED--LVEGKFDLVVAN  232 (295)
T ss_dssp             HSSTTSEEEEES---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC--TCCS-EEEEEEE
T ss_pred             hccCCCEEEEeC--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc--cccccCCEEEEC
Confidence            367889998888  4568888888885 23468899888886665543    221 1221111111  123689999976


Q ss_pred             CC-C-----hHHHHhhcccCCEEEEEe
Q 021628          222 VG-Q-----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       222 ~g-~-----~~~~~~~l~~~G~~v~~g  242 (310)
                      .- .     .....++++++|.++.-|
T Consensus       233 I~~~vL~~l~~~~~~~l~~~G~lIlSG  259 (295)
T PF06325_consen  233 ILADVLLELAPDIASLLKPGGYLILSG  259 (295)
T ss_dssp             S-HHHHHHHHHHCHHHEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhhCCCCEEEEcc
Confidence            53 2     256678899999999887

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.93  E-value=0.14  Score=43.57  Aligned_cols=39  Identities=23%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +++|+|+++++|.+.++.+... |++|+++.+++++++.+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   40 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKK-GARVVISSRNEENLEKA   40 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            6899999999999988776664 99999999988776544

>PRK06841 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.12  Score=43.64  Aligned_cols=45  Identities=29%  Similarity=0.427  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~  195 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++.++++..+...++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~-G~~Vi~~~r~~~~~~~~~~~   58 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAK-GARVALLDRSEDVAEVAAQL   58 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh
Confidence            4679999999999999988877764 99999999987765555444

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.88  E-value=0.075  Score=42.24  Aligned_cols=90  Identities=28%  Similarity=0.405  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC-CCC----cc----------------c
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY-TKE----NI----------------E  209 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~-~~~----~~----------------~  209 (310)
                      .-+|+|+| +|.+|..|+.+++.+ |+++++.+...++++..+..+...+... .+.    ++                .
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~l-Ga~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGL-GAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHT-T-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHC-CCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            36899999 999999999999997 9999999999999988888776544321 110    01                0


Q ss_pred             ccCCCccEEEeCC---CC------hHHHHhhcccCCEEEEEe
Q 021628          210 DLPEKFDVVFDAV---GQ------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       210 ~~~~~~dvvi~~~---g~------~~~~~~~l~~~G~~v~~g  242 (310)
                      .....+|++|.+.   +.      .++.++.|+++..++.++
T Consensus        98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            1123679988643   21      278889999998888884

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.87  E-value=0.081  Score=49.41  Aligned_cols=74  Identities=24%  Similarity=0.516  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh---------------------hhHHHHHHcCCCEEeeCCC-C
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------------------AKLDLLRSLGADLAIDYTK-E  206 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~---------------------~~~~~~~~~g~~~~~~~~~-~  206 (310)
                      ..+++|+|.| +|+.|+.++..++.. |.+|+++...+                     ...+.++++|.+..++... .
T Consensus       139 ~~~~~V~IIG-~GpaGl~aA~~l~~~-G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~  216 (467)
T TIGR01318       139 PTGKRVAVIG-AGPAGLACADILARA-GVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR  216 (467)
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHc-CCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC
Confidence            3678999999 999999999998885 99998887653                     2456667888766554321 1


Q ss_pred             c--ccccCCCccEEEeCCCC
Q 021628          207 N--IEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       207 ~--~~~~~~~~dvvi~~~g~  224 (310)
                      +  ......++|.||.++|.
T Consensus       217 ~~~~~~~~~~~D~vilAtGa  236 (467)
T TIGR01318       217 DISLDDLLEDYDAVFLGVGT  236 (467)
T ss_pred             ccCHHHHHhcCCEEEEEeCC
Confidence            1  11222479999999884

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.87  E-value=0.11  Score=44.18  Aligned_cols=38  Identities=24%  Similarity=0.196  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|.+++|+|++  +++|.+.+..+... |++|+++.++++.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~-G~~v~l~~r~~~~   48 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRAL-GAELAVTYLNDKA   48 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCChhh
Confidence            47899999987  48999988766664 9999998887543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.85  E-value=0.23  Score=46.18  Aligned_cols=73  Identities=27%  Similarity=0.410  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh--hhHHHH-HHcCCCE-EeeCCCCc-ccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL-RSLGADL-AIDYTKEN-IED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~-~~~-------~~~~~dv  217 (310)
                      ++.+++|+|++|++|...++.+... |++|+++++++  ++++.+ ++++... ..|..+.+ ...       ...++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~-Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARD-GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5789999999999999988887774 99999887742  333333 4455332 22322211 110       1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus       288 vi~~AG  293 (450)
T PRK08261        288 VVHNAG  293 (450)
T ss_pred             EEECCC
Confidence            999987

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.85  E-value=0.068  Score=46.07  Aligned_cols=43  Identities=28%  Similarity=0.436  Sum_probs=37.8

Q ss_pred             CCCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      +-|+|.+|+|++.++|.+ |-++|+.  |.+|+++.|+++|++.++
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~   90 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVA   90 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence            457999999999999976 7778884  999999999999998773

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.85  E-value=0.3  Score=43.39  Aligned_cols=92  Identities=18%  Similarity=0.205  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-C--EEeeCCCCcccccCCCccEEEeCCC--
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-D--LAIDYTKENIEDLPEKFDVVFDAVG--  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~dvvi~~~g--  223 (310)
                      .++++||=+| +|. |..+..+++...+.+++.++.+++.++.+++... .  .++..+.++.....+.+|+|+.+..  
T Consensus       112 ~~~~~VLDLG-cGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~  189 (340)
T PLN02490        112 DRNLKVVDVG-GGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIE  189 (340)
T ss_pred             CCCCEEEEEe-cCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhh
Confidence            5788999998 554 7777788776434688899999888877755321 1  1222222222222346899886532  


Q ss_pred             ---C----hHHHHhhcccCCEEEEEe
Q 021628          224 ---Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ---~----~~~~~~~l~~~G~~v~~g  242 (310)
                         +    ++++.+.|+++|+++..+
T Consensus       190 ~~~d~~~~L~e~~rvLkPGG~LvIi~  215 (340)
T PLN02490        190 YWPDPQRGIKEAYRVLKIGGKACLIG  215 (340)
T ss_pred             hCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence               1    368889999999998765

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.85  E-value=0.65  Score=38.79  Aligned_cols=97  Identities=27%  Similarity=0.292  Sum_probs=63.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHcC------C-CEEeeCCCCcccccCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLG------A-DLAIDYTKENIEDLPEK  214 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~g------~-~~~~~~~~~~~~~~~~~  214 (310)
                      ......++.+|+-+| +|. |..+..+++.. +  .+++.++.+++..+.+++.-      . ..+...+..+.......
T Consensus        45 ~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  121 (239)
T PRK00216         45 KWLGVRPGDKVLDLA-CGT-GDLAIALAKAV-GKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALPFPDNS  121 (239)
T ss_pred             HHhCCCCCCeEEEeC-CCC-CHHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCCCCCCC
Confidence            344556788999998 666 88888888874 4  78999999988877775531      1 11222221121222346


Q ss_pred             ccEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          215 FDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       215 ~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+|+....     .    +..+.+.|+++|+++....
T Consensus       122 ~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~  159 (239)
T PRK00216        122 FDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF  159 (239)
T ss_pred             ccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence            898875432     1    3677889999999987653

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.84  E-value=0.57  Score=40.16  Aligned_cols=99  Identities=13%  Similarity=0.172  Sum_probs=65.1

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--CE--EeeCCCCcccccCCCccE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DL--AIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~~--~~~~~~~~~~~~~~~~dv  217 (310)
                      ++...+++++.+||=+| +| .|..+..+++. .+++++.++.+++..+.+++...  ..  +...+..........+|+
T Consensus        44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~  120 (263)
T PTZ00098         44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEK-YGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDM  120 (263)
T ss_pred             HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhh-cCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEE
Confidence            34667889999999998 55 46667777776 48899999999988887765321  11  111111111111246999


Q ss_pred             EEeCC-----C--C----hHHHHhhcccCCEEEEEeC
Q 021628          218 VFDAV-----G--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       218 vi~~~-----g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+...     +  .    ++++.+.|+|+|+++....
T Consensus       121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            98631     1  1    2677899999999997754

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.83  E-value=0.22  Score=42.87  Aligned_cols=94  Identities=19%  Similarity=0.169  Sum_probs=66.8

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..+. -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-..                   +.
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~-~atVtv~hs~T~~-------------------l~  197 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA-GCTVTVCHRFTKN-------------------LR  197 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC-CCeEEEEECCCCC-------------------HH
Confidence            457766556666665544 36999999998788999999988885 8988887653222                   22


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      +..+.+|++|.++|... -.-++++++..++.+|..
T Consensus       198 ~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin  233 (285)
T PRK10792        198 HHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccc
Confidence            33457899999998542 222778899999999854

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.19  Score=42.10  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=35.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ..+.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~   46 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKA-GWDLALVARSQDALEAL   46 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            34678999999999999988877774 89999999988766554

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.79  E-value=0.11  Score=45.07  Aligned_cols=73  Identities=25%  Similarity=0.302  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC----CCEEeeCCCCcccccCCCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ..+.+++|+| +|+.+.+++..+..+ |+ +++++.|+.+|.+.+ +++.    ...+...+..+.......+|+|+||+
T Consensus       125 ~~~k~vlilG-aGGaarAi~~aL~~~-g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            3478999999 899999988877665 76 677888888887666 3332    11111111011111234689999997


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            5

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.74  E-value=0.071  Score=48.64  Aligned_cols=73  Identities=27%  Similarity=0.416  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEe--eCCCC-cccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAI--DYTKE-NIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~--~~~~~-~~~~~~~~~dvvi~~~g  223 (310)
                      .|++++|+|++|++|.+.+..+... |.+|+++++++++++.. .+.... ..+  |..++ ...+..+++|++|+++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~-G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQ-GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            4789999999999999988776664 99999999887765432 221111 122  22221 12222357899998765

>PRK05717 oxidoreductase; Validated

Probab=94.73  E-value=0.17  Score=42.91  Aligned_cols=46  Identities=26%  Similarity=0.334  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG  196 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g  196 (310)
                      .|.+++|+|++|.+|...+..+... |++|+++++++++.+.+ ++++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~~   55 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAE-GWQVVLADLDRERGSKVAKALG   55 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHcC
Confidence            4789999999999999988877764 89999998877665544 3444

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.71  E-value=0.28  Score=43.58  Aligned_cols=102  Identities=17%  Similarity=0.216  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC----  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~----  225 (310)
                      .|.+|.|+| .|.+|...+..++.. |.+|++.+++++.....    .    .. ..++.+....+|+|+.+.+..    
T Consensus       145 ~g~~VgIIG-~G~IG~~vA~~L~~~-G~~V~~~d~~~~~~~~~----~----~~-~~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIG-TGRIGAATAKIYAGF-GATITAYDAYPNKDLDF----L----TY-KDSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCChhHhhhh----h----hc-cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence            567899999 999999999998884 99999999876543211    0    01 112344456789999887731    


Q ss_pred             ----HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                          ...+..|+++..++.++.-.            --+-..+++.+.+|++.
T Consensus       214 ~li~~~~l~~mk~gavlIN~aRG~------------~vd~~aL~~aL~~g~i~  254 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAARGA------------VINTPDLIAAVNDGTLL  254 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcCCcc------------ccCHHHHHHHHHcCCee
Confidence                46678888888888876311            11234556666777664

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=94.71  E-value=0.24  Score=43.64  Aligned_cols=86  Identities=22%  Similarity=0.306  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC-C---
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~---  224 (310)
                      ..|++|.|+| .|.+|...++-++. +|..+....+.+.+.+...+.++.      ..++.+.....|+++-|.. +   
T Consensus       160 ~~gK~vgilG-~G~IG~~ia~rL~~-Fg~~i~y~~r~~~~~~~~~~~~~~------~~d~~~~~~~sD~ivv~~pLt~~T  231 (336)
T KOG0069|consen  160 LEGKTVGILG-LGRIGKAIAKRLKP-FGCVILYHSRTQLPPEEAYEYYAE------FVDIEELLANSDVIVVNCPLTKET  231 (336)
T ss_pred             ccCCEEEEec-CcHHHHHHHHhhhh-ccceeeeecccCCchhhHHHhccc------ccCHHHHHhhCCEEEEecCCCHHH
Confidence            3588999999 99999999999998 685555666677777777666654      3355666677888877765 2   


Q ss_pred             --h--HHHHhhcccCCEEEEEe
Q 021628          225 --C--DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~--~~~~~~l~~~G~~v~~g  242 (310)
                        +  ...+..|++++.++..+
T Consensus       232 ~~liNk~~~~~mk~g~vlVN~a  253 (336)
T KOG0069|consen  232 RHLINKKFIEKMKDGAVLVNTA  253 (336)
T ss_pred             HHHhhHHHHHhcCCCeEEEecc
Confidence              1  68889999999999886

>PRK07774 short chain dehydrogenase; Provisional

Probab=94.70  E-value=0.13  Score=43.38  Aligned_cols=42  Identities=29%  Similarity=0.387  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~-g~~vi~~~r~~~~~~~~   46 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALARE-GASVVVADINAEGAERV   46 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4678999999999999988877774 99999999987665444

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.70  E-value=0.18  Score=46.15  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~  225 (310)
                      -.+.+|+|+| +|.+|.+++..+... |. +++++.|+.++.+.+ ++++.......+  +.......+|+||+|+++.
T Consensus       179 l~~kkvlviG-aG~~a~~va~~L~~~-g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~--~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        179 ISSKNVLIIG-AGQTGELLFRHVTAL-APKQIMLANRTIEKAQKITSAFRNASAHYLS--ELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHhcCCeEecHH--HHHHHhccCCEEEECcCCC
Confidence            4678999999 899999988888775 75 677888888876666 456522222221  2223345799999999853

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.70  E-value=0.14  Score=44.95  Aligned_cols=92  Identities=17%  Similarity=0.125  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCC--EEeeCCCCcccccCCCccEEEeCCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      ....+++|+| +|..|.+.+..+...++. ++.+..+++++.+.+ +++...  .+.   ..+..+...++|+|+.|+++
T Consensus       123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~~~av~~aDiVitaT~s  198 (304)
T PRK07340        123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDGEAIPEAVDLVVTATTS  198 (304)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCHHHHhhcCCEEEEccCC
Confidence            4567899999 899999988877543464 677888888876655 444311  111   12233344689999999874


Q ss_pred             hH-HHHhhcccCCEEEEEeCC
Q 021628          225 CD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      .. -.-..++|+-.+..+|.+
T Consensus       199 ~~Pl~~~~~~~g~hi~~iGs~  219 (304)
T PRK07340        199 RTPVYPEAARAGRLVVAVGAF  219 (304)
T ss_pred             CCceeCccCCCCCEEEecCCC
Confidence            21 111236888888888754

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.69  E-value=0.3  Score=42.03  Aligned_cols=89  Identities=19%  Similarity=0.293  Sum_probs=56.4

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ...+.+++|+| +|++|.+.+..+... |.+++++.+++++.+.+ +++.   ........+    .....+|+||+|++
T Consensus       114 ~~~~k~vliiG-aGg~g~aia~~L~~~-g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivInatp  187 (270)
T TIGR00507       114 LRPNQRVLIIG-AGGAARAVALPLLKA-DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE----LPLHRVDLIINATS  187 (270)
T ss_pred             CccCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh----hcccCccEEEECCC
Confidence            34578999999 689999888777764 88889999988876555 3332   112221111    11246899999986


Q ss_pred             Ch-----H---HHHhhcccCCEEEEEe
Q 021628          224 QC-----D---KALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ~~-----~---~~~~~l~~~G~~v~~g  242 (310)
                      .-     .   .....++++..++.+.
T Consensus       188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       188 AGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            31     1   1134566666666664

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08643 acetoin reductase; Validated

Probab=94.68  E-value=0.17  Score=42.80  Aligned_cols=41  Identities=17%  Similarity=0.185  Sum_probs=34.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~-G~~v~~~~r~~~~~~~~   42 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVED-GFKVAIVDYNEETAQAA   42 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            568999999999999988877774 99999999987766544

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.67  E-value=0.18  Score=42.89  Aligned_cols=42  Identities=29%  Similarity=0.478  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...++.+... |++|++++++.++++.+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   52 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEA-GARVVLSARKAEELEEA   52 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999988776554

>PLN00203 glutamyl-tRNA reductase

Probab=94.65  E-value=0.19  Score=47.37  Aligned_cols=71  Identities=21%  Similarity=0.390  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcC-CCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLG-ADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      +.+|+|+| +|.+|.+++..+... |. +++++.++.++.+.+. +++ ....+.. -++......++|+||.|+++
T Consensus       266 ~kkVlVIG-AG~mG~~~a~~L~~~-G~~~V~V~nRs~era~~La~~~~g~~i~~~~-~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        266 SARVLVIG-AGKMGKLLVKHLVSK-GCTKMVVVNRSEERVAALREEFPDVEIIYKP-LDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCEEEEEe-CHHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHhCCCceEeec-HhhHHHHHhcCCEEEEccCC
Confidence            67999999 799999999888875 76 6888899988877664 453 2211111 11222334589999999873

>PLN03075 nicotianamine synthase; Provisional

Probab=94.63  E-value=0.63  Score=40.42  Aligned_cols=93  Identities=19%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHcC-----CCEEee---CCCCcccccCCCccEEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLG-----ADLAID---YTKENIEDLPEKFDVVF  219 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~g-----~~~~~~---~~~~~~~~~~~~~dvvi  219 (310)
                      .++++|+-.| +|+.++.++.+++.+. +.+++.++.+++..+.+++.-     ...-+.   .+..+.....+.+|+||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF  200 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF  200 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence            3789999999 9999999998887542 356888999999887775532     111111   11111111235799998


Q ss_pred             eCC------CC----hHHHHhhcccCCEEEEEe
Q 021628          220 DAV------GQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~------g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ..+      ..    ++...+.|+|||.++.-.
T Consensus       201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            775      11    378889999999998654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.61  E-value=0.19  Score=42.93  Aligned_cols=36  Identities=33%  Similarity=0.298  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .|.+++|+|+++  ++|.+.++.+... |++|++..+++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~-G~~v~~~~r~~   44 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKH-GAELWFTYQSE   44 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHc-CCEEEEEeCch
Confidence            568899999876  7999877766654 99998887764

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.13  Score=44.16  Aligned_cols=42  Identities=26%  Similarity=0.351  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...++.+... |++|+++.+++++.+..
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   47 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAA-GAAVMIVGRNPDKLAAA   47 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            4689999999999999999888774 99999999887765443

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=94.61  E-value=0.81  Score=38.73  Aligned_cols=114  Identities=23%  Similarity=0.289  Sum_probs=69.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCE-E-e-eCC--CCccc-ccC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADL-A-I-DYT--KENIE-DLP  212 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~-~-~-~~~--~~~~~-~~~  212 (310)
                      ...+++||++|+-.|  .+.|.++..+++.++. -+|+....++++.+.++    .+|... + + +.+  .+.+. ...
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~  111 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELE  111 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-T
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccccc
Confidence            568899999999998  4568888888887632 37888899999887774    455432 2 2 221  11121 122


Q ss_pred             CCccEEE-eCCC---ChHHHHhhc-ccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCC
Q 021628          213 EKFDVVF-DAVG---QCDKALKAV-KEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGK  272 (310)
Q Consensus       213 ~~~dvvi-~~~g---~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (310)
                      ..+|.|| |.-.   .+..+.+.| +++|+++.+..             .-+..+..++.+++..
T Consensus       112 ~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP-------------~ieQv~~~~~~L~~~g  163 (247)
T PF08704_consen  112 SDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP-------------CIEQVQKTVEALREHG  163 (247)
T ss_dssp             TSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES-------------SHHHHHHHHHHHHHTT
T ss_pred             CcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC-------------CHHHHHHHHHHHHHCC
Confidence            4678775 5532   358889999 89999998863             3355555555555533

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.58  E-value=0.2  Score=41.85  Aligned_cols=42  Identities=14%  Similarity=0.179  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|.+++|+|+++++|.+.+.-+... |++|+++.+++++++.+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~   45 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARL-GATLILCDQDQSALKDT   45 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4689999999999999877766664 99999999988876554

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=94.51  E-value=0.09  Score=47.79  Aligned_cols=88  Identities=27%  Similarity=0.352  Sum_probs=55.4

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH--cCCC-E--EeeCCC-CcccccCCCccEEEeCCCC--
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS--LGAD-L--AIDYTK-ENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~--~g~~-~--~~~~~~-~~~~~~~~~~dvvi~~~g~--  224 (310)
                      |+|+|+ |.+|..++..+...... ++++.+++.++.+.+.+  .+.. .  .++..+ +.+....++.|+||+|+|.  
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            789997 99999999987774334 78999999999877743  2221 1  223222 1233345678999999984  


Q ss_pred             -hHHHHhhcccCCEEEEEe
Q 021628          225 -CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g  242 (310)
                       ..-+-.|+..+-.++..+
T Consensus        80 ~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   80 GEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             HHHHHHHHHHHT-EEEESS
T ss_pred             hHHHHHHHHHhCCCeeccc
Confidence             244446777777888743

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.49  E-value=0.17  Score=43.47  Aligned_cols=41  Identities=22%  Similarity=0.264  Sum_probs=34.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~   43 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKK-GYLVIATMRNPEKQENL   43 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            568999999999999988877774 99999999987766554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.49  E-value=0.17  Score=43.55  Aligned_cols=42  Identities=21%  Similarity=0.358  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|.+.+..+... |++|+++++++++.+.+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   50 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARA-GAKVAILDRNQEKAEAV   50 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999987765444

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=94.46  E-value=1.2  Score=36.61  Aligned_cols=97  Identities=20%  Similarity=0.168  Sum_probs=61.2

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCcc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFD  216 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~d  216 (310)
                      +...+++++++|+-.| +| .|..+..+++.  ..+++.++.+++..+.++    +.+...  +...+........+.+|
T Consensus        71 ~~~l~~~~~~~VLeiG-~G-sG~~t~~la~~--~~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  146 (212)
T PRK00312         71 TELLELKPGDRVLEIG-TG-SGYQAAVLAHL--VRRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWPAYAPFD  146 (212)
T ss_pred             HHhcCCCCCCEEEEEC-CC-ccHHHHHHHHH--hCEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCCcCCCcC
Confidence            4567788999999998 33 46666666665  347888888888766553    334322  22221111111124699


Q ss_pred             EEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+....  . .....+.|+++|+++..-.
T Consensus       147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        147 RILVTAAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             EEEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence            8886543  2 4678899999999986644

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.45  E-value=0.17  Score=42.99  Aligned_cols=41  Identities=17%  Similarity=0.253  Sum_probs=33.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +++++|+|++|.+|...+..+... |+++++++++.++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~-g~~vi~~~r~~~~~~~~   42 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEE-GYRVAVADINSEKAANV   42 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            468999999999999988877774 99999999887765444

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.44  E-value=0.47  Score=37.25  Aligned_cols=96  Identities=25%  Similarity=0.276  Sum_probs=57.0

Q ss_pred             ccccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          130 ASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       130 a~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ..+||.....+..++..+ .-.|++|+|.|.+..+|.-...++... ++.|+++...-+.++.                 
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~-~atVt~~h~~T~~l~~-----------------   75 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK-GATVTICHSKTKNLQE-----------------   75 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT-T-EEEEE-TTSSSHHH-----------------
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC-CCeEEeccCCCCcccc-----------------
Confidence            344555444444455433 457999999998889999988888884 8888877665433322                 


Q ss_pred             cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                        ..+.+|+|+.++|..+ ---++++++..++.+|...
T Consensus        76 --~~~~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   76 --ITRRADIVVSAVGKPNLIKADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             --HHTTSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEE
T ss_pred             --eeeeccEEeeeeccccccccccccCCcEEEecCCcc
Confidence              2346789999998542 2235678888888887543

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.42  E-value=0.13  Score=38.43  Aligned_cols=89  Identities=26%  Similarity=0.321  Sum_probs=51.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHc-C----C-CEEeeCCCCcccccCCCccEEEeCCCC-
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSL-G----A-DLAIDYTKENIEDLPEKFDVVFDAVGQ-  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~-g----~-~~~~~~~~~~~~~~~~~~dvvi~~~g~-  224 (310)
                      +|.|+|++|.+|...+.++......+++.+.. +.+....+.+. +    . +..+..  .+.. ...++|+||.|.++ 
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~Dvvf~a~~~~   77 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPE-ELSDVDVVFLALPHG   77 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGH-HHTTESEEEE-SCHH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchh-HhhcCCEEEecCchh
Confidence            58999999999999999887754566665544 44232222222 1    1 222221  1111 12689999999984 


Q ss_pred             -hHHHH-hhcccCCEEEEEeCC
Q 021628          225 -CDKAL-KAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 -~~~~~-~~l~~~G~~v~~g~~  244 (310)
                       ..+.. +.+..+-+++..+..
T Consensus        78 ~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   78 ASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHTTSEEEESSST
T ss_pred             HHHHHHHHHhhCCcEEEeCCHH
Confidence             23333 445666677777653

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.41  E-value=0.16  Score=43.10  Aligned_cols=45  Identities=27%  Similarity=0.299  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~  195 (310)
                      .|++++|+|++  +++|.+.++.+... |++|+++.++++..+.++++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~-G~~Vi~~~r~~~~~~~~~~~   52 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQ-GATVIYTYQNDRMKKSLQKL   52 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEecCchHHHHHHHhh
Confidence            47899999987  69999977766664 99999988874434444444

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.41  E-value=0.24  Score=42.58  Aligned_cols=73  Identities=25%  Similarity=0.466  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhH-H---HHHHcCC--CEEeeCCC-Cccc-------ccCC
Q 021628          149 SAGKSILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKL-D---LLRSLGA--DLAIDYTK-ENIE-------DLPE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~-~---~~~~~g~--~~~~~~~~-~~~~-------~~~~  213 (310)
                      -.|+.|||+|+.+++|.+ |.++|+.  |+++++.+.+.+.. +   .+++.|.  .++.|-++ ++..       +..+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999987 5556664  88888888765543 2   3334442  22333222 2221       1234


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      .+|+++|.+|
T Consensus       114 ~V~ILVNNAG  123 (300)
T KOG1201|consen  114 DVDILVNNAG  123 (300)
T ss_pred             CceEEEeccc
Confidence            7899999988

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.37  E-value=0.098  Score=46.27  Aligned_cols=42  Identities=24%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~-G~~Vil~~R~~~~l~~~   93 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARK-GLNLVLVARNPDKLKDV   93 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHC-CCCEEEEECCHHHHHHH
Confidence            5899999999999999877765553 99999999999887655

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.24  Score=42.56  Aligned_cols=72  Identities=24%  Similarity=0.315  Sum_probs=47.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCC-EEeeCCCCcccc----------cCCCccEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGAD-LAIDYTKENIED----------LPEKFDVV  218 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~----------~~~~~dvv  218 (310)
                      +.+|+|+|++|.+|...+..+... |.+|+++++++++++.+.+ ++.. ..+..+-.+...          ...++|.+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER-GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            458999999999999988877664 8999999998887766543 3321 122221111111          12368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |.++|
T Consensus        82 i~~ag   86 (275)
T PRK08263         82 VNNAG   86 (275)
T ss_pred             EECCC
Confidence            99987

>TIGR00438 rrmJ cell division protein FtsJ

Probab=94.31  E-value=0.49  Score=38.21  Aligned_cols=93  Identities=24%  Similarity=0.255  Sum_probs=54.0

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCcc-c-----ccCCCccE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENI-E-----DLPEKFDV  217 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~-----~~~~~~dv  217 (310)
                      ...+++|++||.+| +|+-+.......+.....++++++.++++    ...+...+. +..+... .     ....++|+
T Consensus        27 ~~~i~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence            46678999999999 66655543333333113478899888765    112332221 2221110 0     11346999


Q ss_pred             EEeC-C----CC---------------hHHHHhhcccCCEEEEEe
Q 021628          218 VFDA-V----GQ---------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~-~----g~---------------~~~~~~~l~~~G~~v~~g  242 (310)
                      |+.. +    |.               +..+.++|+++|+++...
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9952 1    21               245688999999998754

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.29  E-value=0.37  Score=42.48  Aligned_cols=92  Identities=17%  Similarity=0.172  Sum_probs=57.3

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHc---CCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~---g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .+...+|+|+| +|..|.+.+..+...++ .++.+..+++++.+.+ +++   +..... .  .+..+..+++|+|+.|+
T Consensus       122 ~~~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av~~aDIVi~aT  197 (314)
T PRK06141        122 RKDASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAVRQADIISCAT  197 (314)
T ss_pred             CCCCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHHhcCCEEEEee
Confidence            35678999999 89999998764443234 5788889998886665 333   322111 1  12233346899999887


Q ss_pred             CChHHH--HhhcccCCEEEEEeC
Q 021628          223 GQCDKA--LKAVKEGGRVVSIIG  243 (310)
Q Consensus       223 g~~~~~--~~~l~~~G~~v~~g~  243 (310)
                      ++....  -+.++++-.+..+|.
T Consensus       198 ~s~~pvl~~~~l~~g~~i~~ig~  220 (314)
T PRK06141        198 LSTEPLVRGEWLKPGTHLDLVGN  220 (314)
T ss_pred             CCCCCEecHHHcCCCCEEEeeCC
Confidence            743211  256777775555554

>PRK08339 short chain dehydrogenase; Provisional

Probab=94.29  E-value=0.12  Score=44.27  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   48 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARA-GADVILLSRNEENLKKA   48 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776554

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=94.29  E-value=1  Score=35.01  Aligned_cols=104  Identities=19%  Similarity=0.266  Sum_probs=59.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--ChhhHHHHHH----cCC-CEEeeCCCC---------------c---
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRS----LGA-DLAIDYTKE---------------N---  207 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~~~~~~~----~g~-~~~~~~~~~---------------~---  207 (310)
                      +|.|.| .|.+|...++.+....+.+++++..  +.+-+..+-+    .|. ...+...+.               +   
T Consensus         2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~   80 (149)
T smart00846        2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN   80 (149)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence            578999 6999998888776533566666543  4444444422    221 000111100               0   


Q ss_pred             ccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCceEEEEecC
Q 021628          208 IEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD  257 (310)
Q Consensus       208 ~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  257 (310)
                      ..+...|+|+|+||+|.   .+.+..++..|.+-|.++.+.......|.....
T Consensus        81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~~~~~t~V~GvN  133 (149)
T smart00846       81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAKDADKTFVYGVN  133 (149)
T ss_pred             CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCCCCCceEEEeec
Confidence            01112378999999984   355667888888888888765433223444333

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PLN02253 xanthoxin dehydrogenase

Probab=94.29  E-value=0.17  Score=43.54  Aligned_cols=42  Identities=29%  Similarity=0.386  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~-G~~v~~~~~~~~~~~~~   58 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKH-GAKVCIVDLQDDLGQNV   58 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4679999999999999888766664 99999998876655443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.27  E-value=0.61  Score=39.01  Aligned_cols=88  Identities=16%  Similarity=0.241  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecC----hhh--------HHHHHHcCCCEEeeCCCCcccccCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSS----TAK--------LDLLRSLGADLAIDYTKENIEDLPE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~----~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~  213 (310)
                      -.+.+|+|+| +|+.|.+.+..+... |.   ++++++++    .+|        .+++++++... .   ..++.+..+
T Consensus        23 l~~~rvlvlG-AGgAg~aiA~~L~~~-G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~~l~~~l~   96 (226)
T cd05311          23 IEEVKIVING-AGAAGIAIARLLLAA-GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GGTLKEALK   96 (226)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHHc-CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cCCHHHHHh
Confidence            4567999999 899999988877775 76   47788887    444        22334443211 0   012222334


Q ss_pred             CccEEEeCCCC---hHHHHhhcccCCEEEEEe
Q 021628          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g  242 (310)
                      ++|++|++++.   ....++.|.++..++.+.
T Consensus        97 ~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          97 GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence            68999999852   246667776666555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.27  E-value=0.048  Score=47.16  Aligned_cols=66  Identities=23%  Similarity=0.218  Sum_probs=43.6

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      |+|+|++|-+|...+..+... |.+|+++++++++.......+   +.............++|+||++++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD-GHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc-CCEEEEEeCCCCCCCccccee---eecccccchhhhcCCCCEEEECCC
Confidence            689999999999999877774 899999999776643322111   111111111223357999999876

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08589 short chain dehydrogenase; Validated

Probab=94.27  E-value=0.23  Score=42.70  Aligned_cols=38  Identities=18%  Similarity=0.276  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++.++ ++.
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~-G~~vi~~~r~-~~~   42 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQE-GAYVLAVDIA-EAV   42 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCc-HHH
Confidence            4789999999999999988766664 9999999988 443

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=94.27  E-value=0.51  Score=40.95  Aligned_cols=141  Identities=21%  Similarity=0.259  Sum_probs=80.6

Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH--hcccCCCCEEEEEcC
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGG  159 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~~g~~vlI~g~  159 (310)
                      .++|++.+..++            |.++..-....++++..++.+-    ......|++ +++  ....++|.+|+=+| 
T Consensus       109 ~rig~~f~I~Ps------------w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~l-cL~~Le~~~~~g~~vlDvG-  170 (300)
T COG2264         109 VRIGERFVIVPS------------WREYPEPSDELNIELDPGLAFG----TGTHPTTSL-CLEALEKLLKKGKTVLDVG-  170 (300)
T ss_pred             EEeeeeEEECCC------------CccCCCCCCceEEEEccccccC----CCCChhHHH-HHHHHHHhhcCCCEEEEec-
Confidence            667887666542            3332211123445555544331    122333333 442  34456999999988 


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc-cc-cCCCccEEEeCCC-C-----hHH
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI-ED-LPEKFDVVFDAVG-Q-----CDK  227 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~-~~~~~dvvi~~~g-~-----~~~  227 (310)
                       .+.|.+++..++. +..+++.++.++...+.+++    -+..........+. .. ..+.+|+|+-+.= .     ...
T Consensus       171 -cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~  248 (300)
T COG2264         171 -CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPD  248 (300)
T ss_pred             -CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHH
Confidence             4568888888886 23468888888877666643    22221000000011 11 1247999997752 1     268


Q ss_pred             HHhhcccCCEEEEEe
Q 021628          228 ALKAVKEGGRVVSII  242 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g  242 (310)
                      ....++|+|++++-|
T Consensus       249 ~~~~lkpgg~lIlSG  263 (300)
T COG2264         249 IKRLLKPGGRLILSG  263 (300)
T ss_pred             HHHHcCCCceEEEEe
Confidence            888999999999887

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.26  E-value=0.32  Score=42.02  Aligned_cols=95  Identities=24%  Similarity=0.257  Sum_probs=66.3

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-.                   ++.
T Consensus       134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVtichs~T~-------------------~l~  193 (287)
T PRK14173        134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLRE-DATVTLAHSKTQ-------------------DLP  193 (287)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            457665555555565554 46999999999999999988888874 887776644322                   223


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+|+.++|..+ -.-+++++|..++.+|...
T Consensus       194 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        194 AVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence            33456899999998532 2346788999999998654

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.16  Score=42.74  Aligned_cols=42  Identities=26%  Similarity=0.426  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.++.++.+..
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   45 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFARE-GARVVVADRDAEAAERV   45 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHC-CCeEEEecCCHHHHHHH
Confidence            4679999999999999988866664 89999999987765444

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.24  E-value=0.2  Score=44.15  Aligned_cols=100  Identities=21%  Similarity=0.198  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|+..++.....     ...      ...++.+.....|+|+-+.+.     
T Consensus       146 ~gktvgIiG-~G~IG~~va~~l~~f-g~~V~~~~~~~~~~-----~~~------~~~~l~ell~~sDiv~l~~Plt~~T~  212 (314)
T PRK06932        146 RGSTLGVFG-KGCLGTEVGRLAQAL-GMKVLYAEHKGASV-----CRE------GYTPFEEVLKQADIVTLHCPLTETTQ  212 (314)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcC-CCEEEEECCCcccc-----ccc------ccCCHHHHHHhCCEEEEcCCCChHHh
Confidence            478999999 999999999999994 99998876542210     000      011344445678999887761     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       +  ...+..|+++..++.++.-.            -=+-+.+++.+.+|++.
T Consensus       213 ~li~~~~l~~mk~ga~lIN~aRG~------------~Vde~AL~~aL~~g~i~  253 (314)
T PRK06932        213 NLINAETLALMKPTAFLINTGRGP------------LVDEQALLDALENGKIA  253 (314)
T ss_pred             cccCHHHHHhCCCCeEEEECCCcc------------ccCHHHHHHHHHcCCcc
Confidence             1  68889999999999886311            01234555666676665

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.24  E-value=0.39  Score=41.59  Aligned_cols=59  Identities=24%  Similarity=0.392  Sum_probs=48.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYT  204 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~  204 (310)
                      +...++||++|+- +.+|..|.+.+.+|+.+ |++++++..   +++|.+.++.+|+..++...
T Consensus        55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HcCCCCCCCEEEE-cCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            4667999996655 45999999999999995 999888853   88899999999987766443

>PRK08267 short chain dehydrogenase; Provisional

Probab=94.23  E-value=0.24  Score=42.07  Aligned_cols=41  Identities=32%  Similarity=0.318  Sum_probs=34.8

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .+++|+|++|.+|...+..+... |++|++++++.++.+.+.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~   42 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAE-GWRVGAYDINEAGLAALA   42 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHH
Confidence            47999999999999988877764 999999999888776663

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.23  E-value=0.21  Score=42.38  Aligned_cols=37  Identities=38%  Similarity=0.429  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+.+++|+|+++.+|.+.++.+... |++|+++++++.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~-G~~v~~~~r~~~   43 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAE-GARVVLVDRSEL   43 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCchH
Confidence            4679999999999999988877764 999999988754

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.23  E-value=0.26  Score=43.25  Aligned_cols=85  Identities=16%  Similarity=0.266  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      -.|.+|.|+| -|.+|.+.++.++.. |.+|++..+.....+.++..|.. +.     +..+....+|+|+-+.+.    
T Consensus        14 LkgKtVGIIG-~GsIG~amA~nL~d~-G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIG-YGSQGHAQAQNLRDS-GVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEe-EcHHHHHHHHHHHHC-cCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhcCCEEEEeCCChHHH
Confidence            4688999999 999999999999985 99999887765555556666652 11     344556688999988763    


Q ss_pred             --h-HHHHhhcccCCEEEEE
Q 021628          225 --C-DKALKAVKEGGRVVSI  241 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~  241 (310)
                        . ...+..|+++..+++.
T Consensus        86 ~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEEC
Confidence              1 4567788888766654

>PRK08264 short chain dehydrogenase; Validated

Probab=94.23  E-value=0.22  Score=41.68  Aligned_cols=40  Identities=28%  Similarity=0.418  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLD  190 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~  190 (310)
                      .+.+++|+|++|.+|...++.+... |. +|+++++++++.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~-G~~~V~~~~r~~~~~~   45 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLAR-GAAKVYAAARDPESVT   45 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CcccEEEEecChhhhh
Confidence            4678999999999999988877774 88 8999998877654

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.22  E-value=0.12  Score=44.33  Aligned_cols=39  Identities=21%  Similarity=0.338  Sum_probs=32.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~  190 (310)
                      +.+++|+|++|.+|...++.+... |++|+++++++++.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~-g~~V~~~~r~~~~~~   42 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARA-GYRVFGTSRNPARAA   42 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCChhhcc
Confidence            568999999999999988877764 999999999876654

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.22  E-value=0.77  Score=37.45  Aligned_cols=93  Identities=18%  Similarity=0.220  Sum_probs=58.8

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~dvv  218 (310)
                      .....++.+||-+| +| .|..+..+++.  |.+|++++.+++-.+.+++    .+...  +...+-.+.. ..+.+|+|
T Consensus        25 ~l~~~~~~~vLDiG-cG-~G~~a~~La~~--g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~I   99 (197)
T PRK11207         25 AVKVVKPGKTLDLG-CG-NGRNSLYLAAN--GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT-FDGEYDFI   99 (197)
T ss_pred             hcccCCCCcEEEEC-CC-CCHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC-cCCCcCEE
Confidence            33455678999998 44 48888888875  7899999999887666543    22221  1111111111 13469999


Q ss_pred             EeCCC----C-------hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG----Q-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g----~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      +.+..    .       +..+.+.|+|+|.++.+.
T Consensus       100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            87632    1       256778899999965543

>PRK06484 short chain dehydrogenase; Validated

Probab=94.21  E-value=0.19  Score=47.51  Aligned_cols=73  Identities=30%  Similarity=0.450  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-E--eeCCCC-ccc----c---cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-A--IDYTKE-NIE----D---LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~--~~~~~~-~~~----~---~~~~~dv  217 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++.++.++++.+ ++++... .  .|..++ +..    .   ...++|+
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARA-GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999988877774 99999999988887655 4455332 1  222211 111    1   1246899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        83 li~nag   88 (520)
T PRK06484         83 LVNNAG   88 (520)
T ss_pred             EEECCC
Confidence            998875

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.21  E-value=0.22  Score=42.81  Aligned_cols=42  Identities=21%  Similarity=0.306  Sum_probs=35.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      .+++|+|++|.+|...+..+... |.+|+++++++++.+.+++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~-g~~v~~~~r~~~~~~~~~~   44 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR-GDRVAATVRRPDALDDLKA   44 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence            57999999999999988776664 8999999999888776643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.20  E-value=0.19  Score=42.93  Aligned_cols=36  Identities=19%  Similarity=0.247  Sum_probs=28.0

Q ss_pred             CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .+.+++|+|+  ++++|.+.+..+... |++|++..+++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~-G~~v~~~~~~~   42 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQ-GAELAFTYVVD   42 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCcH
Confidence            5679999996  569999977766664 99998876553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=94.19  E-value=0.29  Score=40.88  Aligned_cols=72  Identities=17%  Similarity=0.268  Sum_probs=45.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEE-eeCCCC-ccc-------ccCCCccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLA-IDYTKE-NIE-------DLPEKFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~-~~~~~~-~~~-------~~~~~~dvvi~  220 (310)
                      +.+++|+|+++++|...++.+... |++|+++.+++++ .+.+++.+...+ .|..+. +..       ....++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ-GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            468999999999999988877664 9999999887654 333344453221 122111 110       01235899998


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      ++|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            876

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.19  E-value=0.17  Score=44.61  Aligned_cols=73  Identities=22%  Similarity=0.290  Sum_probs=46.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CC--C-EEeeCC--C-CcccccCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GA--D-LAIDYT--K-ENIEDLPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~--~-~~~~~~--~-~~~~~~~~~~dvvi  219 (310)
                      .|.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+.++    +.  . .++..+  + +.+....+++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLR-GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            5789999999999999988877764 99999888876654333221    11  1 122211  1 11222234789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      .+++
T Consensus        83 h~A~   86 (322)
T PLN02986         83 HTAS   86 (322)
T ss_pred             EeCC
Confidence            8875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.18  E-value=0.23  Score=48.64  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|++++++.++.+.+
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~-Ga~Vvi~~r~~~~~~~~  454 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAE-GAHVVLADLNLEAAEAV  454 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776544

>PRK07402 precorrin-6B methylase; Provisional

Probab=94.17  E-value=0.72  Score=37.51  Aligned_cols=97  Identities=16%  Similarity=0.275  Sum_probs=59.8

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCc-ccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKEN-IEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~-~~~~~~~~d  216 (310)
                      ....++++++|+=.|  .+.|..+..+++...+.+++.++.+++..+.+++    ++...  ++..+... +......+|
T Consensus        34 ~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d  111 (196)
T PRK07402         34 SQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPD  111 (196)
T ss_pred             HhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCC
Confidence            456778899988887  4456667777765335789999999988777643    45332  22222211 112222334


Q ss_pred             E-EEeCCCC----hHHHHhhcccCCEEEEEe
Q 021628          217 V-VFDAVGQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 v-vi~~~g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      . +++....    ++.+.+.|+++|+++...
T Consensus       112 ~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        112 RVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             EEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            4 4443322    378888999999998774

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.13  E-value=0.32  Score=46.15  Aligned_cols=85  Identities=22%  Similarity=0.359  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...+..++.. |.+|++.++.... +...+++....      ++.+....+|+|+.+.+.     
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDiV~l~lP~t~~t~  209 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAF-GMKVIAYDPYISP-ERAAQLGVELV------SLDELLARADFITLHTPLTPETR  209 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCCh-hHHHhcCCEEE------cHHHHHhhCCEEEEccCCChHhh
Confidence            478999999 999999999999984 9999999875332 22344554322      234445678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeC
Q 021628          225 --C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (310)
                        + ...+..|+++..++.++.
T Consensus       210 ~li~~~~l~~mk~ga~lIN~aR  231 (526)
T PRK13581        210 GLIGAEELAKMKPGVRIINCAR  231 (526)
T ss_pred             cCcCHHHHhcCCCCeEEEECCC
Confidence              1 577889999999988863

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.12  E-value=0.3  Score=42.74  Aligned_cols=82  Identities=29%  Similarity=0.329  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++...      .+....    ..++.+....+|+|+.+.+.     
T Consensus       121 ~gktvgIiG-~G~IG~~vA~~l~af-G~~V~~~~r~~~~------~~~~~~----~~~l~ell~~aDiv~~~lp~t~~T~  188 (303)
T PRK06436        121 YNKSLGILG-YGGIGRRVALLAKAF-GMNIYAYTRSYVN------DGISSI----YMEPEDIMKKSDFVLISLPLTDETR  188 (303)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcc------cCcccc----cCCHHHHHhhCCEEEECCCCCchhh
Confidence            588999999 999999988999984 9999999886322      121110    11334445678999888762     


Q ss_pred             -h--HHHHhhcccCCEEEEEeC
Q 021628          225 -C--DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~  243 (310)
                       +  ...+..|+++..++.++.
T Consensus       189 ~li~~~~l~~mk~ga~lIN~sR  210 (303)
T PRK06436        189 GMINSKMLSLFRKGLAIINVAR  210 (303)
T ss_pred             cCcCHHHHhcCCCCeEEEECCC
Confidence             1  567888999988887763

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.10  E-value=0.29  Score=43.28  Aligned_cols=103  Identities=18%  Similarity=0.264  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      |.||-|+| .|.+|...++.++.. |.+|++.++ ..+.....  .+.   .  ...++.+.....|++....+.     
T Consensus       142 gkTvGIiG-~G~IG~~va~~l~af-gm~v~~~d~~~~~~~~~~--~~~---~--~~~~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         142 GKTVGIIG-LGRIGRAVAKRLKAF-GMKVIGYDPYSPRERAGV--DGV---V--GVDSLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCeEEEECCCCchhhhcc--ccc---e--ecccHHHHHhhCCEEEEcCCCCcchh
Confidence            78999999 999999999999995 999999998 33322211  111   0  011234445567888776651     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       +  ...+..|+++..++.++.-.            --+-+.+++.+.+|++.
T Consensus       213 g~i~~~~~a~MK~gailIN~aRG~------------vVde~aL~~AL~~G~i~  253 (324)
T COG0111         213 GLINAEELAKMKPGAILINAARGG------------VVDEDALLAALDSGKIA  253 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCCcc------------eecHHHHHHHHHcCCcc
Confidence             1  57788888888887775211            12345667777777776

>PRK06720 hypothetical protein; Provisional

Probab=94.10  E-value=0.27  Score=39.13  Aligned_cols=41  Identities=27%  Similarity=0.349  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~  191 (310)
                      .+..++|.|+++++|...+..+... |++|+++++++++.+.
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~-G~~V~l~~r~~~~~~~   55 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQ-GAKVIVTDIDQESGQA   55 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHH
Confidence            4789999999999999988766664 8999999987766543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.09  E-value=0.32  Score=39.84  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCC-CC--
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAV-GQ--  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~-g~--  224 (310)
                      -.|.+|+|.| .|.+|..+++.+... |.+|++.++++++.+.+. .++.. .++.. +   .....+|+++-|+ +.  
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~-G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~-~---l~~~~~Dv~vp~A~~~~I   98 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEE-GAKLIVADINEEAVARAAELFGAT-VVAPE-E---IYSVDADVFAPCALGGVI   98 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE-EEcch-h---hccccCCEEEeccccccc
Confidence            3578999999 899999999999885 999999999988877764 44543 22221 1   1112688888664 32  


Q ss_pred             hHHHHhhcc
Q 021628          225 CDKALKAVK  233 (310)
Q Consensus       225 ~~~~~~~l~  233 (310)
                      ....++.|+
T Consensus        99 ~~~~~~~l~  107 (200)
T cd01075          99 NDDTIPQLK  107 (200)
T ss_pred             CHHHHHHcC
Confidence            245556663

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.09  E-value=0.26  Score=41.57  Aligned_cols=70  Identities=23%  Similarity=0.356  Sum_probs=47.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCE-EeeCCCCcccc----------cCCCccEEEe
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AIDYTKENIED----------LPEKFDVVFD  220 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~----------~~~~~dvvi~  220 (310)
                      +++|+|++|.+|.+.+..+... |++|+++++++++.+.+.+ ++... .+..+-.+...          ...++|.++.
T Consensus         2 ~vlItGasg~iG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999988887774 9999999999887766533 44322 22111111111          1236899998


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      ++|
T Consensus        81 ~ag   83 (248)
T PRK10538         81 NAG   83 (248)
T ss_pred             CCC
Confidence            875

>PRK06484 short chain dehydrogenase; Validated

Probab=94.08  E-value=0.25  Score=46.73  Aligned_cols=73  Identities=23%  Similarity=0.397  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCE-Ee--eCCCC-cccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AI--DYTKE-NIED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~--~~~~~-~~~~-------~~~~~dv  217 (310)
                      .|.+++|+|+++++|...++.+... |++|+++.+++++++.+. +++... .+  |..++ +...       ..+.+|+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAA-GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999988776664 999999999888877664 344322 12  22211 1111       1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus       347 li~nAg  352 (520)
T PRK06484        347 LVNNAG  352 (520)
T ss_pred             EEECCC
Confidence            998876

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.24  Score=41.23  Aligned_cols=70  Identities=20%  Similarity=0.398  Sum_probs=45.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCC-cccc----cCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKE-NIED----LPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~-~~~~----~~~~~dvvi~~~g  223 (310)
                      +++|+|+++.+|.+.++.+... |.+|+++.+++++++.+ ++++...+ .|..++ +...    ..+.+|++++++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRND-GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            5899999999999988877664 99999999988877655 34443322 222211 1111    1125788887753

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.06  E-value=0.2  Score=39.39  Aligned_cols=73  Identities=23%  Similarity=0.344  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccc-----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIED-----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~dv  217 (310)
                      +|-.-+|+|+++++|.+++.-+... |+.+++.+...+ ..+.++++|-..++.+.+....+           .-+..|+
T Consensus         8 kglvalvtggasglg~ataerlakq-gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQ-GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhc-CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            4556689999999999988866664 999999988554 45666899977666543221111           1135789


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      .++|+|
T Consensus        87 ~vncag   92 (260)
T KOG1199|consen   87 LVNCAG   92 (260)
T ss_pred             eeeccc
Confidence            999988

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.03  E-value=0.15  Score=49.87  Aligned_cols=73  Identities=21%  Similarity=0.453  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh---------------------hHHHHHHcCCCEEeeCC---C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA---------------------KLDLLRSLGADLAIDYT---K  205 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~---------------------~~~~~~~~g~~~~~~~~---~  205 (310)
                      .+++|+|+| +|+.|+.|+..+... |.+|+++++.+.                     +.+.++++|.+...+..   +
T Consensus       326 ~~~~VaIIG-aGpAGLsaA~~L~~~-G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        326 SDKRVAIIG-AGPAGLACADVLARN-GVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            578999999 999999999988885 999999887533                     34555677765443321   1


Q ss_pred             CcccccCCCccEEEeCCCC
Q 021628          206 ENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       206 ~~~~~~~~~~dvvi~~~g~  224 (310)
                      -.......++|.||.++|.
T Consensus       404 i~~~~~~~~~DavilAtGa  422 (654)
T PRK12769        404 ISLESLLEDYDAVFVGVGT  422 (654)
T ss_pred             CCHHHHHhcCCEEEEeCCC
Confidence            1112223478999998874

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.02  E-value=0.19  Score=41.62  Aligned_cols=71  Identities=27%  Similarity=0.476  Sum_probs=47.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE-EeeCCCCc-ccc----c-CCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKEN-IED----L-PEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~----~-~~~~dvvi~~~g  223 (310)
                      .+++|+|++|.+|...++.+... |++++++++++++.+.++..+... ..|..+.+ ...    . ...+|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRAD-GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhC-CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCC
Confidence            47899999999999888766664 999999999888777766555321 12222211 111    1 125899988765

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.01  E-value=0.33  Score=42.96  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHH-hhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~-~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      .|.++.|+| .|.+|...++.++ . +|.+|+..++.... +....++...      .++.+....+|+|.-+.+.    
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~-fgm~V~~~~~~~~~-~~~~~~~~~~------~~l~ell~~sDvv~lh~plt~~T  214 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFG-FNMPILYNARRHHK-EAEERFNARY------CDLDTLLQESDFVCIILPLTDET  214 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhc-CCCEEEEECCCCch-hhHHhcCcEe------cCHHHHHHhCCEEEEeCCCChHH
Confidence            578999999 9999999999998 7 59999887765322 2222334321      1344455678999887652    


Q ss_pred             --h--HHHHhhcccCCEEEEEeC
Q 021628          225 --C--DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~--~~~~~~l~~~G~~v~~g~  243 (310)
                        +  ...++.|++++.+|.++.
T Consensus       215 ~~li~~~~l~~mk~ga~lIN~aR  237 (323)
T PRK15409        215 HHLFGAEQFAKMKSSAIFINAGR  237 (323)
T ss_pred             hhccCHHHHhcCCCCeEEEECCC
Confidence              1  578899999999998863

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=93.99  E-value=0.29  Score=41.42  Aligned_cols=73  Identities=22%  Similarity=0.379  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCCE-Ee--eCCCC-cccc-------cCCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADL-AI--DYTKE-NIED-------LPEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~~-~~--~~~~~-~~~~-------~~~~~d  216 (310)
                      .+++++|+|+++++|.+.++.+... |++|+++.+++..  .+.+++.+.+. .+  |-.++ +...       ...++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~-G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKA-GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999988877764 9999888775422  23334444322 22  22111 1111       123689


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++++++|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9998876

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.98  E-value=0.2  Score=43.65  Aligned_cols=72  Identities=18%  Similarity=0.273  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecCh---hhHHHH-HHcC---CC-EE--eeCCCC-cccccCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST---AKLDLL-RSLG---AD-LA--IDYTKE-NIEDLPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~---~~~~~~-~~~g---~~-~~--~~~~~~-~~~~~~~~~dv  217 (310)
                      .+.+++|+| +|+.|.+++..+... |++ ++++.+++   ++.+.+ +++.   .. .+  .+..+. +.......+|+
T Consensus       125 ~~k~vlI~G-AGGagrAia~~La~~-G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        125 KGKKLTVIG-AGGAATAIQVQCALD-GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            578999999 589999887766664 875 88888876   444333 3332   11 11  222111 11222346799


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+|++
T Consensus       203 lINaTp  208 (289)
T PRK12548        203 LVNATL  208 (289)
T ss_pred             EEEeCC
Confidence            999975

>PRK06114 short chain dehydrogenase; Provisional

Probab=93.98  E-value=0.34  Score=41.02  Aligned_cols=37  Identities=22%  Similarity=0.296  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+.+++|+|+++++|.+.++.+... |++|++++++++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~-G~~v~~~~r~~~   43 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQA-GADVALFDLRTD   43 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence            4679999999999999988877774 999999988643

>PRK06487 glycerate dehydrogenase; Provisional

Probab=93.93  E-value=0.29  Score=43.21  Aligned_cols=80  Identities=21%  Similarity=0.327  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++. +|.+|+..++.....      ...      ..++.+.....|+|+.+.+.     
T Consensus       147 ~gktvgIiG-~G~IG~~vA~~l~~-fgm~V~~~~~~~~~~------~~~------~~~l~ell~~sDiv~l~lPlt~~T~  212 (317)
T PRK06487        147 EGKTLGLLG-HGELGGAVARLAEA-FGMRVLIGQLPGRPA------RPD------RLPLDELLPQVDALTLHCPLTEHTR  212 (317)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhh-CCCEEEEECCCCCcc------ccc------ccCHHHHHHhCCEEEECCCCChHHh
Confidence            467999999 99999999999998 499999887652210      000      11334445678888887762     


Q ss_pred             -h--HHHHhhcccCCEEEEEeC
Q 021628          225 -C--DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~  243 (310)
                       +  ...+..|+++..+|.++.
T Consensus       213 ~li~~~~~~~mk~ga~lIN~aR  234 (317)
T PRK06487        213 HLIGARELALMKPGALLINTAR  234 (317)
T ss_pred             cCcCHHHHhcCCCCeEEEECCC
Confidence             1  688899999999998863

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.92  E-value=0.32  Score=41.89  Aligned_cols=36  Identities=25%  Similarity=0.276  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .+.+++|+|++  +++|.+.+..+... |++|+++.+++
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~-G~~V~l~~r~~   46 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAA-GAELAFTYQGD   46 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCch
Confidence            56899999975  79999977766664 99998877653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.92  E-value=0.22  Score=42.27  Aligned_cols=74  Identities=19%  Similarity=0.258  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC--CCEE-eeCCC--CcccccC-CCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--ADLA-IDYTK--ENIEDLP-EKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g--~~~~-~~~~~--~~~~~~~-~~~dvvi~~~  222 (310)
                      ..+.+|+|+|++|.+|...+..+... |.+|+++.+++++.......+  ...+ .+..+  ..+.... .++|+||.+.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAK-GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhC-CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            34679999999999999988877764 899999999877654332111  2211 23222  1122223 4799999886


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        94 g   94 (251)
T PLN00141         94 G   94 (251)
T ss_pred             C
Confidence            6

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=93.92  E-value=0.32  Score=40.93  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...+..+... |++|++++++.++.+.+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~   43 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEE-GAKVAVFDLNREAAEKV   43 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence            4688999999999999988877764 99999999887765544

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06198 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.27  Score=41.72  Aligned_cols=40  Identities=30%  Similarity=0.439  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLD  190 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~  190 (310)
                      .+.+++|+|++|.+|...++.+... |++ |+++.+++++..
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~-G~~~V~~~~r~~~~~~   45 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAER-GAAGLVICGRNAEKGE   45 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHC-CCCeEEEEcCCHHHHH
Confidence            5688999999999999988887774 888 888888766554

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.91  E-value=0.45  Score=41.06  Aligned_cols=95  Identities=23%  Similarity=0.272  Sum_probs=65.6

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..++ -.|.+|+|.|.+..+|.-.+.++... ++.|+++....                   .++.
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~-~atVt~~hs~t-------------------~~l~  196 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQA-GATVTICHSKT-------------------RDLA  196 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEecCCC-------------------CCHH
Confidence            446665445555555443 47999999998888899999988884 89888764321                   1223


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      ...+.+|+|+.++|... -.-++++++..++.+|...
T Consensus       197 ~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~  233 (285)
T PRK14189        197 AHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNR  233 (285)
T ss_pred             HHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccc
Confidence            33467899999998431 1227889999999998543

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=93.90  E-value=0.93  Score=37.36  Aligned_cols=97  Identities=23%  Similarity=0.274  Sum_probs=62.5

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHcCC----CEEeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~dv  217 (310)
                      ......++.+|+-+| +|. |..+..+++.. +  .+++.++.+++..+.+++...    ..+...+........+.+|+
T Consensus        33 ~~~~~~~~~~vldiG-~G~-G~~~~~~~~~~-~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~  109 (223)
T TIGR01934        33 KLIGVFKGQKVLDVA-CGT-GDLAIELAKSA-PDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQADAEALPFEDNSFDA  109 (223)
T ss_pred             HHhccCCCCeEEEeC-CCC-ChhHHHHHHhc-CCCceEEEEECCHHHHHHHHHHhccCCCceEEecchhcCCCCCCcEEE
Confidence            344455889999998 554 77788888874 5  488899999888777754321    12222211111112346898


Q ss_pred             EEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          218 VFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+...+     .    ++.+.+.|+++|+++.+..
T Consensus       110 i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  144 (223)
T TIGR01934       110 VTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEF  144 (223)
T ss_pred             EEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEe
Confidence            876432     1    3677889999999998764

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=93.89  E-value=0.33  Score=42.35  Aligned_cols=63  Identities=27%  Similarity=0.392  Sum_probs=52.7

Q ss_pred             HHHHH----HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEee
Q 021628          139 AYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAID  202 (310)
Q Consensus       139 a~~al----~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~  202 (310)
                      ||.++    +...++||.++||-+-+|..|...+..+... |++++++..   +.||...++.+|+..+..
T Consensus        87 a~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~-Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   87 AWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALR-GYKCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHc-CceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            55554    4678999999999999999999999999985 999998864   788999999999876653

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.88  E-value=0.44  Score=41.35  Aligned_cols=95  Identities=21%  Similarity=0.208  Sum_probs=65.5

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+...                   ++.
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~-~atVtv~hs~T~-------------------~l~  196 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAA-NATVTIAHSRTQ-------------------DLA  196 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            446665445555555544 47999999999999999988888874 888877743222                   222


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      ...+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus       197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        197 SITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence            23456889999998542 2246788899999998554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.84  E-value=0.16  Score=42.77  Aligned_cols=42  Identities=21%  Similarity=0.342  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...++.+... |.+|+++++++++.+.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~-G~~V~~~~r~~~~~~~~   45 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAE-GARVVVTDRNEEAAERV   45 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4579999999999999988877774 99999999988776555

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.76  E-value=0.83  Score=39.58  Aligned_cols=77  Identities=25%  Similarity=0.278  Sum_probs=53.1

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCChH-
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD-  226 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~-  226 (310)
                      .-.|.+|+|+|..+.+|...+.++... |+.|+++.+..+.+.                   +..+++|++|+++|... 
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~-gatVtv~~~~t~~L~-------------------~~~~~aDIvI~AtG~~~~  215 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNA-NATVTICHSRTQNLP-------------------ELVKQADIIVGAVGKPEL  215 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhC-CCEEEEEeCCchhHH-------------------HHhccCCEEEEccCCCCc
Confidence            457899999995445999988888875 887777765322221                   11257889999998432 


Q ss_pred             HHHhhcccCCEEEEEeCC
Q 021628          227 KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~  244 (310)
                      -..+.++++..++.++..
T Consensus       216 v~~~~lk~gavViDvg~n  233 (283)
T PRK14192        216 IKKDWIKQGAVVVDAGFH  233 (283)
T ss_pred             CCHHHcCCCCEEEEEEEe
Confidence            113568888888888754

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.75  E-value=0.24  Score=38.31  Aligned_cols=86  Identities=21%  Similarity=0.314  Sum_probs=54.5

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC------cc---cccCCCccEEEeCCCC
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE------NI---EDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~---~~~~~~~dvvi~~~g~  224 (310)
                      |+|+| +|.+|.+.+..++.. |.+|..+.+.+ +.+.+++.|........+.      ..   ......+|++|-|+-+
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~-g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa   77 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQA-GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA   77 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHT-TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred             CEEEC-cCHHHHHHHHHHHHC-CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence            68999 999998877766664 99999999988 7777776663221111000      00   1123579999999752


Q ss_pred             --h----HHHHhhcccCCEEEEEe
Q 021628          225 --C----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~----~~~~~~l~~~G~~v~~g  242 (310)
                        .    +.....+.++..++++.
T Consensus        78 ~~~~~~l~~l~~~~~~~t~iv~~q  101 (151)
T PF02558_consen   78 YQLEQALQSLKPYLDPNTTIVSLQ  101 (151)
T ss_dssp             GGHHHHHHHHCTGEETTEEEEEES
T ss_pred             cchHHHHHHHhhccCCCcEEEEEe
Confidence              2    34445666666676663

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK04266 fibrillarin; Provisional

Probab=93.74  E-value=1.4  Score=36.92  Aligned_cols=127  Identities=20%  Similarity=0.233  Sum_probs=70.9

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc---cccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI---EDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~---~~~~~~~d  216 (310)
                      +...+++|++|+=.|.  +.|..+..+++.....+|++++.+++.++.+.+    ..--..+..+....   ......+|
T Consensus        66 ~~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D  143 (226)
T PRK04266         66 KNFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVD  143 (226)
T ss_pred             hhCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCC
Confidence            4578899999998883  335556666766422478999999987665432    21111222221111   11234699


Q ss_pred             EEEeCCCC-------hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          217 VVFDAVGQ-------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       217 vvi~~~g~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      +++.-...       ++.+.+.|+|+|+++..- +..  ..++.. .....++..++.+++..+...
T Consensus       144 ~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~v-~~~--~~d~~~-~~~~~~~~~~~~l~~aGF~~i  206 (226)
T PRK04266        144 VIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLAI-KAR--SIDVTK-DPKEIFKEEIRKLEEGGFEIL  206 (226)
T ss_pred             EEEECCCChhHHHHHHHHHHHhcCCCcEEEEEE-ecc--cccCcC-CHHHHHHHHHHHHHHcCCeEE
Confidence            99854432       357778999999999841 110  011100 012345556677776555543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.74  E-value=0.35  Score=45.35  Aligned_cols=69  Identities=25%  Similarity=0.369  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-h----HHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-K----LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~----~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ..+.+|+|+| .|.+|+.++.+++.. |.+|++++.++. .    .+.+++.|.....+....    ....+|+|+-+.|
T Consensus        14 ~~~~~v~viG-~G~~G~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~----~~~~~D~Vv~s~G   87 (480)
T PRK01438         14 WQGLRVVVAG-LGVSGFAAADALLEL-GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT----LPEDTDLVVTSPG   87 (480)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc----ccCCCCEEEECCC
Confidence            3467999999 899999999998885 999999886442 2    234566676554432221    2346889988877

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=93.73  E-value=0.79  Score=37.93  Aligned_cols=91  Identities=18%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-----------------EeeCCCCcccc
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-----------------AIDYTKENIED  210 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-----------------~~~~~~~~~~~  210 (310)
                      .++.+||+.|  -+.|.-++-+|..  |.+|+.++.++...+.+ ++.+...                 ++..+-..+..
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~~--G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAEQ--GHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            5677999998  4468888888874  99999999999988775 3333210                 01111001111


Q ss_pred             -cCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628          211 -LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       211 -~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                       ....+|.|+|+..  +         ...+.+.|+|+|+++....
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             1235899999753  1         2578899999998766643

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08226 short chain dehydrogenase; Provisional

Probab=93.72  E-value=0.36  Score=41.04  Aligned_cols=40  Identities=23%  Similarity=0.340  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~  190 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.++++..+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~-G~~Vv~~~r~~~~~~   44 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARH-GANLILLDISPEIEK   44 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEecCCHHHHH
Confidence            4689999999999999988877774 999999988765433

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=93.72  E-value=0.43  Score=45.30  Aligned_cols=86  Identities=23%  Similarity=0.366  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++... .+...+++....     .++.+....+|+|+-+.+.     
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~f-G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDvV~l~lPlt~~T~  208 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKAF-GMKVLAYDPYIS-PERAEQLGVELV-----DDLDELLARADFITVHTPLTPETR  208 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEECCCCC-hhHHHhcCCEEc-----CCHHHHHhhCCEEEEccCCChhhc
Confidence            568999999 999999999999984 999999987422 222344553211     1334445678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeC
Q 021628          225 --C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (310)
                        + ...+..|+++..++.++.
T Consensus       209 ~li~~~~l~~mk~ga~lIN~aR  230 (525)
T TIGR01327       209 GLIGAEELAKMKKGVIIVNCAR  230 (525)
T ss_pred             cCcCHHHHhcCCCCeEEEEcCC
Confidence              1 567888999998888863

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=93.71  E-value=0.78  Score=38.29  Aligned_cols=97  Identities=25%  Similarity=0.249  Sum_probs=62.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~d  216 (310)
                      ....++++++||=+|  .+.|..+..+++..+ +.+++.++.+++..+.+++    .+.+.  ++..+........+.+|
T Consensus        39 ~~l~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  116 (231)
T TIGR02752        39 KRMNVQAGTSALDVC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMELPFDDNSFD  116 (231)
T ss_pred             HhcCCCCCCEEEEeC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcCCCCCCCcc
Confidence            456778899999998  345667777777631 3589999999888776643    22221  22222222222234789


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+.+..     .    ++++.+.|+++|+++...
T Consensus       117 ~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~  151 (231)
T TIGR02752       117 YVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE  151 (231)
T ss_pred             EEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence            9886532     1    367788999999998764

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.71  E-value=0.45  Score=40.97  Aligned_cols=95  Identities=22%  Similarity=0.262  Sum_probs=66.1

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..+. -.|.+|+|.|.+..+|.-..+++... ++.|+++-..-                   .++.
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVtichs~T-------------------~~l~  195 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNE-NATVTIAHSRT-------------------KDLP  195 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCC-------------------CCHH
Confidence            456665555555555544 46999999999999999988888874 88887664322                   1223


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus       196 ~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~  232 (284)
T PRK14170        196 QVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcc
Confidence            33457899999999542 2236788999999998654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.70  E-value=0.17  Score=42.37  Aligned_cols=68  Identities=25%  Similarity=0.361  Sum_probs=49.9

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcCCCEEeeCCCC---cccccCCCccEEEeCCC
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~---~~~~~~~~~dvvi~~~g  223 (310)
                      |+|+|++|.+|...++.+.. .+.+|.+++|+..  ..+.+++.|+..+ ..+-.   .+....+|+|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~-~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS-AGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-TTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHh-CCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHHcCCceEEeecC
Confidence            78999999999999998887 4899999999764  3556677887544 32222   22333569999998877

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.65  E-value=0.23  Score=43.80  Aligned_cols=74  Identities=22%  Similarity=0.295  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH---c-CC--C-EEe--eCCCC-cccccCCCccEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---L-GA--D-LAI--DYTKE-NIEDLPEKFDVV  218 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~---~-g~--~-~~~--~~~~~-~~~~~~~~~dvv  218 (310)
                      ..+.+|+|+|++|.+|...+..+... |.+|++++++.++......   . +.  . .++  +..+. .......++|+|
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   81 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFR-GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV   81 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence            35789999999999999988877774 9999888876654332211   1 11  1 122  21111 122223468999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |++++
T Consensus        82 ih~A~   86 (325)
T PLN02989         82 FHTAS   86 (325)
T ss_pred             EEeCC
Confidence            99876

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=93.64  E-value=1.3  Score=36.39  Aligned_cols=89  Identities=22%  Similarity=0.289  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---  225 (310)
                      .|.+|+|.| .|.+|...+..+... |++|++++.+.. .+..+.+.+.-...... .. .....++++||-+.+..   
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~-ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~-~~-~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKA-GAQLRVIAEELESELTLLAEQGGITWLARC-FD-ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHcCCEEEEeCC-CC-HHHhCCcEEEEECCCCHHHH
Confidence            467999999 899999988888874 999998876443 34444443421122111 11 12235899999998853   


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      .......+..|..+...
T Consensus        84 ~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        84 RRVAHAARARGVPVNVV  100 (205)
T ss_pred             HHHHHHHHHcCCEEEEC
Confidence            34555555667776553

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=93.62  E-value=1.2  Score=41.64  Aligned_cols=96  Identities=18%  Similarity=0.195  Sum_probs=63.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc--CCC---EEeeCCCCcccccCCCccEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL--GAD---LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~--g~~---~~~~~~~~~~~~~~~~~dvv  218 (310)
                      +...++++++||=+| +|. |..+..+++.. +.+++.++.+++.++.+++.  +..   .+...+-.......+.+|+|
T Consensus       260 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I  336 (475)
T PLN02336        260 DKLDLKPGQKVLDVG-CGI-GGGDFYMAENF-DVHVVGIDLSVNMISFALERAIGRKCSVEFEVADCTKKTYPDNSFDVI  336 (475)
T ss_pred             HhcCCCCCCEEEEEe-ccC-CHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcCcccCCCCCCCEEEE
Confidence            344567889999998 554 77778888874 88999999999888777542  211   11111111111112469999


Q ss_pred             EeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +....     .    +.++.+.|+|+|+++...
T Consensus       337 ~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~  369 (475)
T PLN02336        337 YSRDTILHIQDKPALFRSFFKWLKPGGKVLISD  369 (475)
T ss_pred             EECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            87522     1    368889999999998764

>PRK07856 short chain dehydrogenase; Provisional

Probab=93.62  E-value=0.31  Score=41.22  Aligned_cols=38  Identities=26%  Similarity=0.485  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++++++++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~-g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAA-GATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence            4789999999999999988877764 9999999987655

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.62  E-value=0.43  Score=40.44  Aligned_cols=73  Identities=22%  Similarity=0.328  Sum_probs=45.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEE-eeCCCC-cccc-------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLA-IDYTKE-NIED-------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~-~~~~~~-~~~~-------~~~~~dvvi  219 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++.+ +++..+.+++.+...+ .|..++ +...       ..+++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLRE-GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999988877664 899887765 4444444444332211 222211 1111       123689999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      .++|
T Consensus        85 ~~ag   88 (255)
T PRK06463         85 NNAG   88 (255)
T ss_pred             ECCC
Confidence            8875

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.59  E-value=0.44  Score=39.89  Aligned_cols=73  Identities=25%  Similarity=0.395  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .+.+++|+|++|.+|...+..+... |..|+...++.++++.+ .+++.. .++..+-.+...          ...++|.
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQ-GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999988877664 88888888877776655 334422 122221111111          1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|.++|
T Consensus        84 vi~~ag   89 (245)
T PRK12936         84 LVNNAG   89 (245)
T ss_pred             EEECCC
Confidence            999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=93.55  E-value=0.18  Score=44.33  Aligned_cols=42  Identities=24%  Similarity=0.335  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++.+++++.+.+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~-G~~Vil~~R~~~~~~~~   54 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAA-GAEVILPVRNRAKGEAA   54 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988766664 99999999988775544

>PRK07062 short chain dehydrogenase; Provisional

Probab=93.55  E-value=0.19  Score=42.84  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++.+++++++.+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   48 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEA-GASVAICGRDEERLASA   48 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776544

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.54  E-value=0.45  Score=41.14  Aligned_cols=84  Identities=14%  Similarity=0.148  Sum_probs=54.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------hH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------CD  226 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------~~  226 (310)
                      +|.|+| .|.+|...+..++.. |.+|++.++++++.+.+.+.|......   .+. +....+|+||.|++.      .+
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~-g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~~-~~~~~aDlVilavp~~~~~~~~~   75 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSL-GHTVYGVSRRESTCERAIERGLVDEAS---TDL-SLLKDCDLVILALPIGLLLPPSE   75 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCccccc---CCH-hHhcCCCEEEEcCCHHHHHHHHH
Confidence            588999 899998766666663 889999999999888887776321111   111 124578999999872      13


Q ss_pred             HHHhhcccCCEEEEEe
Q 021628          227 KALKAVKEGGRVVSII  242 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g  242 (310)
                      .....++++..+..++
T Consensus        76 ~l~~~l~~~~ii~d~~   91 (279)
T PRK07417         76 QLIPALPPEAIVTDVG   91 (279)
T ss_pred             HHHHhCCCCcEEEeCc
Confidence            3444455554454443

>PRK07063 short chain dehydrogenase; Provisional

Probab=93.53  E-value=0.19  Score=42.68  Aligned_cols=42  Identities=31%  Similarity=0.374  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|...+..+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~vv~~~r~~~~~~~~   47 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFARE-GAAVALADLDAALAERA   47 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999988776554

>PRK12828 short chain dehydrogenase; Provisional

Probab=93.52  E-value=0.2  Score=41.78  Aligned_cols=40  Identities=28%  Similarity=0.410  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~  190 (310)
                      ++.+++|+|++|.+|...++.+... |++|+++++++++..
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~-G~~v~~~~r~~~~~~   45 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAAR-GARVALIGRGAAPLS   45 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHC-CCeEEEEeCChHhHH
Confidence            4789999999999999988877774 999999999776543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.51  E-value=0.31  Score=41.71  Aligned_cols=36  Identities=28%  Similarity=0.303  Sum_probs=28.0

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .|.+++|+|+++  ++|.+.+..+... |++|++..+++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~-G~~vil~~r~~   42 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQND   42 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHC-CCEEEEEecch
Confidence            478999999765  8999877766554 89998887763

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.49  E-value=0.42  Score=44.24  Aligned_cols=84  Identities=24%  Similarity=0.406  Sum_probs=51.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH-HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------h
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------~  225 (310)
                      +|.|+|+.|.+|.+.+..++.. |.+|++.++++++. +.+.++|....     .+..+....+|+||-|++.      +
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~-G~~V~v~~r~~~~~~~~a~~~gv~~~-----~~~~e~~~~aDvVIlavp~~~~~~vl   75 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEK-GFEVIVTGRDPKKGKEVAKELGVEYA-----NDNIDAAKDADIVIISVPINVTEDVI   75 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHC-CCEEEEEECChHHHHHHHHHcCCeec-----cCHHHHhccCCEEEEecCHHHHHHHH
Confidence            5889987899999888888874 88899999988774 44566665211     1112223456777766652      1


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      ......++++..++.++
T Consensus        76 ~~l~~~l~~~~iViDvs   92 (437)
T PRK08655         76 KEVAPHVKEGSLLMDVT   92 (437)
T ss_pred             HHHHhhCCCCCEEEEcc
Confidence            23333445555555554

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=93.48  E-value=3.6  Score=34.72  Aligned_cols=113  Identities=21%  Similarity=0.226  Sum_probs=72.7

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccc--cCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADLAIDYTKENIED--LPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~--~~~~~d  216 (310)
                      ...++.||++|+=.|  .+.|.+++-+|...+. .+|+.....++..+.++    +++....+.....|..+  ..+.+|
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vD  165 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVD  165 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccC
Confidence            467889999999988  4557888888877634 37888888888776663    34533212111122211  123788


Q ss_pred             EEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628          217 VVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG  271 (310)
Q Consensus       217 vvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (310)
                      .+|==.+.    ++.+.+.|.++|.++.+..             .-+..+...+-+++.
T Consensus       166 av~LDmp~PW~~le~~~~~Lkpgg~~~~y~P-------------~veQv~kt~~~l~~~  211 (256)
T COG2519         166 AVFLDLPDPWNVLEHVSDALKPGGVVVVYSP-------------TVEQVEKTVEALRER  211 (256)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEEcC-------------CHHHHHHHHHHHHhc
Confidence            77644442    4889999999999998863             335555555555554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.48  E-value=0.2  Score=42.20  Aligned_cols=42  Identities=26%  Similarity=0.385  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~-G~~vi~~~r~~~~~~~~   45 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQK-GAKLALIDLNQEKLEEA   45 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999999888774 99999999887765544

>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism]

Probab=93.48  E-value=1.1  Score=37.81  Aligned_cols=98  Identities=23%  Similarity=0.319  Sum_probs=63.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcC------CcEEEEecChhhHHHHHHc----C--CC--E-EeeCCCCccccc
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRSL----G--AD--L-AIDYTKENIEDL  211 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g------~~vi~~~~~~~~~~~~~~~----g--~~--~-~~~~~~~~~~~~  211 (310)
                      ++.|++..=++-.+|+.|-.|-.+.+....      .+|++.+.|++.+...++-    +  .+  . .+..+.+++...
T Consensus        95 ~L~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~LpFd  174 (296)
T KOG1540|consen   95 KLGPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAEDLPFD  174 (296)
T ss_pred             ccCCCCCCeEEEecCCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhhcCCCcCCceEEEeCCcccCCCC
Confidence            444444333333368888888888887643      6799999999988776431    2  22  1 223344444444


Q ss_pred             CCCccEEEeCCC-----C----hHHHHhhcccCCEEEEEeCC
Q 021628          212 PEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       212 ~~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~~  244 (310)
                      ...+|.+--+.|     +    ++++.+.|+|||||..+-.+
T Consensus       175 d~s~D~yTiafGIRN~th~~k~l~EAYRVLKpGGrf~cLeFs  216 (296)
T KOG1540|consen  175 DDSFDAYTIAFGIRNVTHIQKALREAYRVLKPGGRFSCLEFS  216 (296)
T ss_pred             CCcceeEEEecceecCCCHHHHHHHHHHhcCCCcEEEEEEcc
Confidence            456777766665     2    47999999999999977654

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=93.48  E-value=1.2  Score=35.08  Aligned_cols=114  Identities=21%  Similarity=0.174  Sum_probs=78.5

Q ss_pred             hhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhHHHHHHc-CCCEEeeCCC
Q 021628          128 EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLLRSL-GADLAIDYTK  205 (310)
Q Consensus       128 ~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~  205 (310)
                      -.|.+|.+-.+|-.+.....++-|-.|+-+|. | .|..+-.++.. .....++++.-+.+-...+.+. ....+++.+.
T Consensus        26 VGaI~PsSs~lA~~M~s~I~pesglpVlElGP-G-TGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda  103 (194)
T COG3963          26 VGAILPSSSILARKMASVIDPESGLPVLELGP-G-TGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDA  103 (194)
T ss_pred             eeeecCCcHHHHHHHHhccCcccCCeeEEEcC-C-ccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccch
Confidence            44556667667777778888899999999983 3 35454444443 3245677888888877777554 3445777765


Q ss_pred             Ccccc-----cCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628          206 ENIED-----LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       206 ~~~~~-----~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                      .+...     ....+|.||++.+  +         ++.+...++.+|.++++..
T Consensus       104 ~~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963         104 FDLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             hhHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            55431     1225899999986  2         2788899999999998854

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.44  E-value=0.99  Score=34.61  Aligned_cols=93  Identities=23%  Similarity=0.238  Sum_probs=63.3

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      .+||........++..+ --.|.+|+|+|.+..+|.-.+.++... |+.|+++.++...++                   
T Consensus         7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~-gatV~~~~~~t~~l~-------------------   66 (140)
T cd05212           7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRD-GATVYSCDWKTIQLQ-------------------   66 (140)
T ss_pred             ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeCCCCcCHH-------------------
Confidence            34555444444444443 347999999999999999988888874 888888875432222                   


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIG  243 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~  243 (310)
                      +..+.+|+|+.++|... ---+++++|..++.+|.
T Consensus        67 ~~v~~ADIVvsAtg~~~~i~~~~ikpGa~Vidvg~  101 (140)
T cd05212          67 SKVHDADVVVVGSPKPEKVPTEWIKPGATVINCSP  101 (140)
T ss_pred             HHHhhCCEEEEecCCCCccCHHHcCCCCEEEEcCC
Confidence            12356789999988542 22367888988887774

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.44  E-value=0.4  Score=42.09  Aligned_cols=35  Identities=29%  Similarity=0.327  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|.+++|+|+++++|.+.++.+... |++|+++.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~-G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAA-GATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEecc
Confidence            4789999999999999988877764 9999998886

>PRK07576 short chain dehydrogenase; Provisional

Probab=93.44  E-value=0.21  Score=42.74  Aligned_cols=42  Identities=33%  Similarity=0.525  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...++.+... |++|+++++++++.+..
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   49 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARA-GANVAVASRSQEKVDAA   49 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988877774 99999999887765433

>PRK14982 acyl-ACP reductase; Provisional

Probab=93.42  E-value=0.25  Score=43.83  Aligned_cols=91  Identities=16%  Similarity=0.214  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCCCChH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD  226 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~  226 (310)
                      -.+.+|+|+|++|.+|...+..+....+ .+++++.++++++..+. +++...+.     ++.+...++|+|+.+++...
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----hHHHHHccCCEEEECCcCCc
Confidence            3678999999889999988777653235 47788888888877763 44321111     22233457899998887421


Q ss_pred             H---HHhhcccCCEEEEEeCC
Q 021628          227 K---ALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       227 ~---~~~~l~~~G~~v~~g~~  244 (310)
                      .   -...+.+.-.++..+.+
T Consensus       228 ~~~I~~~~l~~~~~viDiAvP  248 (340)
T PRK14982        228 GVEIDPETLKKPCLMIDGGYP  248 (340)
T ss_pred             CCcCCHHHhCCCeEEEEecCC
Confidence            1   11345566666666654

>PRK06398 aldose dehydrogenase; Validated

Probab=93.37  E-value=0.26  Score=41.94  Aligned_cols=38  Identities=24%  Similarity=0.409  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++.+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~-G~~Vi~~~r~~~~   42 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEE-GSNVINFDIKEPS   42 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCccc
Confidence            4689999999999999988877774 9999998887654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.37  E-value=0.42  Score=42.36  Aligned_cols=88  Identities=22%  Similarity=0.181  Sum_probs=57.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE------ee---CCCCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA------ID---YTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~------~~---~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|.|+| +|.+|.+.+..+... |.+|++..+++++.+.+++.+....      +.   ....+..+..+.+|+||-|..
T Consensus         6 ~I~iIG-~G~mG~~ia~~L~~~-G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~   83 (328)
T PRK14618          6 RVAVLG-AGAWGTALAVLAASK-GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP   83 (328)
T ss_pred             eEEEEC-cCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence            689999 999998877776663 8899999999888777765421100      00   001122223357899999876


Q ss_pred             C--hHHHHhhcccCCEEEEEe
Q 021628          224 Q--CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g  242 (310)
                      +  .+..++.++++-.++++.
T Consensus        84 ~~~~~~v~~~l~~~~~vi~~~  104 (328)
T PRK14618         84 SKALRETLAGLPRALGYVSCA  104 (328)
T ss_pred             hHHHHHHHHhcCcCCEEEEEe
Confidence            3  466777777776666553

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.34  E-value=0.46  Score=40.84  Aligned_cols=41  Identities=20%  Similarity=0.268  Sum_probs=33.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ..+++|+|++|.+|...+..+... |++|+++.++.++.+.+
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~-G~~V~~~~r~~~~~~~~   50 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAA-GFPVALGARRVEKCEEL   50 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            458999999999999988877764 99999988877665443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=93.34  E-value=0.21  Score=42.26  Aligned_cols=42  Identities=26%  Similarity=0.391  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++.+++++.+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   50 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQA-GAEVILNGRDPAKLAAA   50 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877764 99999999987765443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.31  E-value=0.25  Score=44.97  Aligned_cols=42  Identities=24%  Similarity=0.342  Sum_probs=34.6

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .+...+.+|+|+|++|.+|...+..+... |.+|++++++.++
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~-G~~V~~l~R~~~~   96 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRR-GYNVVAVAREKSG   96 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEEechhh
Confidence            34456779999999999999998887774 9999999987654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.30  E-value=0.26  Score=42.06  Aligned_cols=34  Identities=26%  Similarity=0.285  Sum_probs=26.5

Q ss_pred             CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEec
Q 021628          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      .+.+++|+|+  ++++|.+.+..+... |++|+++.+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~-G~~v~~~~~   40 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKRE-GAELAFTYV   40 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHC-CCeEEEEcc
Confidence            4789999995  579999977766654 999988753

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.30  E-value=0.77  Score=40.06  Aligned_cols=86  Identities=27%  Similarity=0.336  Sum_probs=53.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE---Eee---CCCCcccccCCCccEEEeCCC--C
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AID---YTKENIEDLPEKFDVVFDAVG--Q  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~---~~~~~~~~~~~~~dvvi~~~g--~  224 (310)
                      +|.|+| +|.+|.+.+..+... |.+|+++++++++.+.+++.|...   ...   ....+.... ..+|+||-|+.  .
T Consensus         2 ~I~IiG-~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~   78 (304)
T PRK06522          2 KIAILG-AGAIGGLFGAALAQA-GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ   78 (304)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence            588999 899998877766664 889999999888887776655421   000   001111122 57899998876  3


Q ss_pred             hHHHHhh----cccCCEEEEE
Q 021628          225 CDKALKA----VKEGGRVVSI  241 (310)
Q Consensus       225 ~~~~~~~----l~~~G~~v~~  241 (310)
                      ...+++.    +.++..++++
T Consensus        79 ~~~~~~~l~~~l~~~~~iv~~   99 (304)
T PRK06522         79 LPAALPSLAPLLGPDTPVLFL   99 (304)
T ss_pred             HHHHHHHHhhhcCCCCEEEEe
Confidence            3444443    3344556654

>PRK08703 short chain dehydrogenase; Provisional

Probab=93.28  E-value=0.24  Score=41.53  Aligned_cols=42  Identities=29%  Similarity=0.453  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...++.+... |.+|+++.+++++.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~-g~~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAA-GATVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCChHHHHHH
Confidence            4679999999999999988877774 99999999988776544

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.26  E-value=0.6  Score=40.63  Aligned_cols=94  Identities=20%  Similarity=0.212  Sum_probs=64.4

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ..||+....+..++.... -.|.+|+|+|..+.+|.-.+..+... |+.|+++. ++..                    +
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~-g~tVtv~~~rT~~--------------------l  195 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA-NATVTIAHSRTRD--------------------L  195 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC-CCEEEEECCCCCC--------------------H
Confidence            456665555555554443 57999999999999999888877774 89898884 4431                    1


Q ss_pred             cccCCCccEEEeCCCChHHHH-hhcccCCEEEEEeCCC
Q 021628          209 EDLPEKFDVVFDAVGQCDKAL-KAVKEGGRVVSIIGSV  245 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~~~~-~~l~~~G~~v~~g~~~  245 (310)
                      .+..+.+|+|+.+.|.....- .++++|..++.+|...
T Consensus       196 ~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~  233 (296)
T PRK14188        196 PAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINR  233 (296)
T ss_pred             HHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcc
Confidence            222346789999988542111 2388999999998644

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.24  E-value=0.68  Score=40.28  Aligned_cols=94  Identities=22%  Similarity=0.221  Sum_probs=63.8

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..+. -.|.+|.+.|..+.+|.-.+.++... |+.|++..+....                   ..
T Consensus       138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~-gatVtv~~~~t~~-------------------l~  197 (301)
T PRK14194        138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA-HCSVTVVHSRSTD-------------------AK  197 (301)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEECCCCCC-------------------HH
Confidence            456665555555554443 56999999996679999888888774 9999888654322                   22


Q ss_pred             ccCCCccEEEeCCCChHHH-HhhcccCCEEEEEeCC
Q 021628          210 DLPEKFDVVFDAVGQCDKA-LKAVKEGGRVVSIIGS  244 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~~~-~~~l~~~G~~v~~g~~  244 (310)
                      +..+.+|+||-++|..... -.++++|..++.+|..
T Consensus       198 e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin  233 (301)
T PRK14194        198 ALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGIN  233 (301)
T ss_pred             HHHhcCCEEEEecCChhcccHhhccCCcEEEEeccc
Confidence            2335678999998853111 1238889999888854

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=93.19  E-value=0.31  Score=42.69  Aligned_cols=73  Identities=21%  Similarity=0.304  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH---HHHHcC-CC---EEeeCC---CCcccccCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD---LLRSLG-AD---LAIDYT---KENIEDLPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~---~~~~~g-~~---~~~~~~---~~~~~~~~~~~dvvi  219 (310)
                      .+.+|.|+|++|-+|...+..+... |+.|..++|+++..+   .++++. +.   .++..+   ...+.....|+|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r-GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR-GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC-CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            6789999999999999999988884 999999999887633   356654 11   122211   122333356899999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      .++.
T Consensus        84 H~As   87 (327)
T KOG1502|consen   84 HTAS   87 (327)
T ss_pred             EeCc
Confidence            8764

>PLN02427 UDP-apiose/xylose synthase

Probab=93.18  E-value=0.31  Score=44.26  Aligned_cols=78  Identities=13%  Similarity=0.092  Sum_probs=48.4

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-----C-EEeeCC--C-CcccccCCCcc
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-----D-LAIDYT--K-ENIEDLPEKFD  216 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-----~-~~~~~~--~-~~~~~~~~~~d  216 (310)
                      .+..+..+|+|+|++|-+|...++.+....+.+|++++++.++...+...+.     . ..+..+  + +.+....+++|
T Consensus         9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            3444556899999999999988887665325889999887666554433221     1 112111  1 11222344799


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      +||++++
T Consensus        89 ~ViHlAa   95 (386)
T PLN02427         89 LTINLAA   95 (386)
T ss_pred             EEEEccc
Confidence            9999875

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.16  E-value=0.98  Score=40.07  Aligned_cols=92  Identities=15%  Similarity=0.157  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHc----CCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSL----GADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      +...+++|+| +|..+.+.+..+....+. ++.+..++.++.+.+ +++    +.. +...  ++..+...++|+|+.|+
T Consensus       127 ~~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~--~~~~~av~~aDiVvtaT  202 (326)
T TIGR02992       127 EDSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA--TDPRAAMSGADIIVTTT  202 (326)
T ss_pred             CCCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe--CCHHHHhccCCEEEEec
Confidence            4557899999 899998877766533464 677888998886655 333    322 1111  12233346899999998


Q ss_pred             CChHHH--HhhcccCCEEEEEeCC
Q 021628          223 GQCDKA--LKAVKEGGRVVSIIGS  244 (310)
Q Consensus       223 g~~~~~--~~~l~~~G~~v~~g~~  244 (310)
                      ++..-.  .+.++++-.+..+|..
T Consensus       203 ~s~~p~i~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       203 PSETPILHAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             CCCCcEecHHHcCCCcEEEeeCCC
Confidence            753211  2457777777777743

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK07890 short chain dehydrogenase; Provisional

Probab=93.15  E-value=0.25  Score=41.84  Aligned_cols=42  Identities=31%  Similarity=0.448  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|...+..+... |++|+++++++++.+.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~-G~~V~~~~r~~~~~~~~   45 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARA-GADVVLAARTAERLDEV   45 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            5689999999999999988877774 99999999988766554

>TIGR00477 tehB tellurite resistance protein TehB

Probab=93.11  E-value=1.1  Score=36.54  Aligned_cols=92  Identities=21%  Similarity=0.197  Sum_probs=57.0

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEe
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ....++.+||-.|  .+.|..+..+++.  |.+|++++.+++..+.+++    .+.. .....+.... .....+|+|+.
T Consensus        26 ~~~~~~~~vLDiG--cG~G~~a~~la~~--g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~  100 (195)
T TIGR00477        26 VKTVAPCKTLDLG--CGQGRNSLYLSLA--GYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFS  100 (195)
T ss_pred             hccCCCCcEEEeC--CCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEE
Confidence            3444567888888  4568888888874  7899999999887766543    2322 1111111111 11346899986


Q ss_pred             CCC----C-------hHHHHhhcccCCEEEEEe
Q 021628          221 AVG----Q-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       221 ~~g----~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      +..    +       ++.+.+.|+|+|.++.+.
T Consensus       101 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477       101 TVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             ecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            521    1       257778899999965553

Part of a tellurite-reducing operon tehA and tehB

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=93.11  E-value=0.24  Score=42.59  Aligned_cols=43  Identities=35%  Similarity=0.507  Sum_probs=36.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.|..++|+|++.++|.+.+..+... |++|+++.+++++++..
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~-Ga~v~i~~r~~~~~~~~   48 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKA-GAKVVITGRSEERLEET   48 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            36788999999999998877766664 99999999999986655

>PRK06172 short chain dehydrogenase; Provisional

Probab=93.11  E-value=0.24  Score=41.81  Aligned_cols=42  Identities=33%  Similarity=0.389  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~   47 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFARE-GAKVVVADRDAAGGEET   47 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988776664 89999999987765443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.11  E-value=1  Score=35.30  Aligned_cols=85  Identities=14%  Similarity=0.114  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDK  227 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~  227 (310)
                      .|.+|+|.| .|.+|.--++.+.. .|++|+++.  ++..+.+.+++.-. +..... ......++|+||-++++  .+.
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~-~ga~V~VIs--p~~~~~l~~l~~i~-~~~~~~-~~~dl~~a~lViaaT~d~e~N~   85 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKD-TGAFVTVVS--PEICKEMKELPYIT-WKQKTF-SNDDIKDAHLIYAATNQHAVNM   85 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEc--CccCHHHHhccCcE-EEeccc-ChhcCCCceEEEECCCCHHHHH
Confidence            578999999 89999876666655 389888874  44444444454211 111111 11124578999999885  344


Q ss_pred             HHhhcccCCEEEE
Q 021628          228 ALKAVKEGGRVVS  240 (310)
Q Consensus       228 ~~~~l~~~G~~v~  240 (310)
                      .+..++..+.++.
T Consensus        86 ~i~~~a~~~~~vn   98 (157)
T PRK06719         86 MVKQAAHDFQWVN   98 (157)
T ss_pred             HHHHHHHHCCcEE
Confidence            4443333333443

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.10  E-value=0.71  Score=39.80  Aligned_cols=94  Identities=19%  Similarity=0.213  Sum_probs=65.7

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||.....+..++..+ .-.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-..                   +.
T Consensus       138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVt~chs~T~~-------------------l~  197 (284)
T PRK14177        138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEM-NATVTLCHSKTQN-------------------LP  197 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCCC-------------------HH
Confidence            45666544444455443 357999999999999999988888874 8888777543222                   22


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      +..+.+|+++.++|..+ -.-+++++|..++.+|..
T Consensus       198 ~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin  233 (284)
T PRK14177        198 SIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYN  233 (284)
T ss_pred             HHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCc
Confidence            33457889999998532 234688899999999853

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.10  E-value=0.55  Score=39.74  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|.+++|+|+++.+|.+.++.+... |++|+.+.++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~-G~~vv~~~~~   43 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEA-GCDIVGINIV   43 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEecCc
Confidence            4689999999999999988877774 9999887654

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.09  E-value=0.73  Score=39.71  Aligned_cols=95  Identities=25%  Similarity=0.266  Sum_probs=65.8

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..++ -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-.                   ++.
T Consensus       135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~atVtichs~T~-------------------~l~  194 (282)
T PRK14169        135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNH-DATVTIAHSKTR-------------------NLK  194 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence            456665555555554443 57999999999999999988888874 888876643222                   222


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus       195 ~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        195 QLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccc
Confidence            33457889999998532 2346788999999998644

>PRK07109 short chain dehydrogenase; Provisional

Probab=93.08  E-value=0.24  Score=44.12  Aligned_cols=73  Identities=18%  Similarity=0.290  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-e--eCCCC-cccc-------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTKE-NIED-------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~~-~~~~-------~~~~  214 (310)
                      .+.+++|+|+++++|...++.+... |++|+++.+++++++.+    ++.|.... +  |..+. +...       ...+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~-G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARR-GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4679999999999999988877774 99999999988876554    23343322 2  22211 1111       1236


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        86 iD~lInnAg   94 (334)
T PRK07109         86 IDTWVNNAM   94 (334)
T ss_pred             CCEEEECCC
Confidence            899999886

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.08  E-value=0.25  Score=41.72  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|.+.++.+... |++|+++.++.++.+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~-G~~Vi~~~r~~~~~~~~   48 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQ-GAHVIVSSRKLDGCQAV   48 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4578999999999999988887775 99999999987766544

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.06  E-value=1  Score=33.01  Aligned_cols=85  Identities=19%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccEEEeCCCCh----
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGQC----  225 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dvvi~~~g~~----  225 (310)
                      |+|.| .|.+|...++.++. .+.++++++.++++.+.+++.|.. ++..+..+..    .....++.++-+.++.    
T Consensus         1 vvI~G-~g~~~~~i~~~L~~-~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~   77 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKE-GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENL   77 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHH-TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHh-CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHH
Confidence            67889 89999999998888 477899999999999999888854 3333322211    1134788888777642    


Q ss_pred             --HHHHhhcccCCEEEEE
Q 021628          226 --DKALKAVKEGGRVVSI  241 (310)
Q Consensus       226 --~~~~~~l~~~G~~v~~  241 (310)
                        -..++.+.+..+++..
T Consensus        78 ~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   78 LIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHCCCCeEEEE
Confidence              2344555566666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=93.04  E-value=0.4  Score=39.98  Aligned_cols=89  Identities=28%  Similarity=0.396  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE--EeeCCC---CcccccCCCccEEEeCC-
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTK---ENIEDLPEKFDVVFDAV-  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~---~~~~~~~~~~dvvi~~~-  222 (310)
                      -+|.+||=.| +|+ |+++..+|+.  |++|+.++.+++-.+.++......  -+++..   +++....+.||+|++.- 
T Consensus        58 l~g~~vLDvG-CGg-G~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          58 LPGLRVLDVG-CGG-GILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             CCCCeEEEec-CCc-cHhhHHHHHC--CCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhH
Confidence            4788888888 443 6888888886  899999999999988886422111  123332   22333346899998652 


Q ss_pred             ----CC----hHHHHhhcccCCEEEEE
Q 021628          223 ----GQ----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 ----g~----~~~~~~~l~~~G~~v~~  241 (310)
                          .+    +..+.++++|+|.++.-
T Consensus       134 lEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         134 LEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence                22    25788999999998644

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=93.04  E-value=0.61  Score=41.47  Aligned_cols=94  Identities=26%  Similarity=0.295  Sum_probs=65.1

Q ss_pred             ccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628          132 LPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (310)
                      .||........++..++ -.|++|+|.|.+..+|.-...++... ++.|+++-..-                   .++.+
T Consensus       211 ~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~-~ATVTicHs~T-------------------~nl~~  270 (364)
T PLN02616        211 VPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQRE-DATVSIVHSRT-------------------KNPEE  270 (364)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHC-CCeEEEeCCCC-------------------CCHHH
Confidence            46555444444444433 47999999999999999988888874 88787764322                   22233


Q ss_pred             cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      ..+.+|+||.++|..+ ---+++++|..++.+|...
T Consensus       271 ~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~  306 (364)
T PLN02616        271 ITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINP  306 (364)
T ss_pred             HHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccc
Confidence            3467899999999542 2346788999999998644

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=93.03  E-value=0.2  Score=42.55  Aligned_cols=64  Identities=22%  Similarity=0.265  Sum_probs=44.9

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCC-CccEEEeCCC
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE-KFDVVFDAVG  223 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~dvvi~~~g  223 (310)
                      |+|+|++|-+|.+.+..++.. |-+|++++|++.+.+.-......     ..+..+.... ++|+|||.+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~-gh~v~iltR~~~~~~~~~~~~v~-----~~~~~~~~~~~~~DavINLAG   65 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKG-GHQVTILTRRPPKASQNLHPNVT-----LWEGLADALTLGIDAVINLAG   65 (297)
T ss_pred             CeEeccccchhHHHHHHHHhC-CCeEEEEEcCCcchhhhcCcccc-----ccchhhhcccCCCCEEEECCC
Confidence            589999999999999988874 88999999988776543221111     1111222223 7999999998

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.02  E-value=0.41  Score=39.56  Aligned_cols=70  Identities=17%  Similarity=0.290  Sum_probs=45.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCccccc------CCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIEDL------PEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g  223 (310)
                      .+++|+|++|.+|...+..+.. . .+|++++++.++.+.+.+ .....++..+-.+....      ..+.|.+|.++|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~-~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAP-T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHh-h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            5799999999999998887766 4 789999998877665543 21112222221111111      126899999876

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.01  E-value=0.71  Score=39.86  Aligned_cols=95  Identities=27%  Similarity=0.315  Sum_probs=66.0

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++......                   +.
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~-~atVt~chs~t~~-------------------l~  196 (284)
T PRK14190        137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNE-NATVTYCHSKTKN-------------------LA  196 (284)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHC-CCEEEEEeCCchh-------------------HH
Confidence            456665555555555443 57999999999999999988888874 8888877543221                   22


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+|+.++|... -.-+++++|..++.+|...
T Consensus       197 ~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        197 ELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccc
Confidence            22456889999998532 2235678999999998654

>PRK06194 hypothetical protein; Provisional

Probab=92.96  E-value=0.25  Score=42.67  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.++||+|++|.+|...+..+... |++|++++++.++++..
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   46 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAAL-GMKLVLADVQQDALDRA   46 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence            3578999999999999988877764 99999999887665444

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=92.95  E-value=0.28  Score=41.28  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=36.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +..++.+++|+|++|.+|...++.+... |++|++++++.++.+.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~-G~~Vi~~~r~~~~~~~~   52 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARH-GATVILLGRTEEKLEAV   52 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Confidence            3457889999999999999988877764 99999999987765443

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=92.94  E-value=1.3  Score=36.32  Aligned_cols=89  Identities=16%  Similarity=0.146  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CD  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~  226 (310)
                      .|.+|+|.| .|.+|...+..+... |++|+++..... ++..+.+-+. ......... .....++|+||-|+++  .+
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~-ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~l~~adlViaaT~d~elN   84 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKY-GAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSDIVDAFLVIAATNDPRVN   84 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhhcCCceEEEEcCCCHHHH
Confidence            578999999 899998877766664 888888865422 2222222221 111111111 1223578999999885  34


Q ss_pred             HHHhhcccCCEEEEEe
Q 021628          227 KALKAVKEGGRVVSII  242 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g  242 (310)
                      ..+...+..+.++...
T Consensus        85 ~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         85 EQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHhCCcEEEC
Confidence            4444333445565553

>PRK06197 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.24  Score=43.31  Aligned_cols=41  Identities=24%  Similarity=0.261  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~  191 (310)
                      .+.+|+|+|++|++|...+..+... |++|+++.++.++.+.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~-G~~vi~~~r~~~~~~~   55 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAK-GAHVVLAVRNLDKGKA   55 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            5789999999999999988876664 8999999998776543

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=92.93  E-value=2.1  Score=34.20  Aligned_cols=69  Identities=19%  Similarity=0.230  Sum_probs=41.5

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEeC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      ...++++|+-+|  .+.|..+..+++.  +.+++.++.+++..+.+++    .+.. .++..+...  ...+.+|+|+..
T Consensus        16 ~~~~~~~vLdlG--~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Vi~n   89 (179)
T TIGR00537        16 RELKPDDVLEIG--AGTGLVAIRLKGK--GKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFK--GVRGKFDVILFN   89 (179)
T ss_pred             HhcCCCeEEEeC--CChhHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccc--ccCCcccEEEEC
Confidence            345567888887  4556677777775  4488999999998777643    2322 122222111  123468888754

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=92.93  E-value=0.29  Score=47.91  Aligned_cols=77  Identities=16%  Similarity=0.065  Sum_probs=48.1

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc----ccccCCCccEEEeCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN----IEDLPEKFDVVFDAV  222 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~dvvi~~~  222 (310)
                      ..+++.+|+|+|++|-+|...++.+....|.+|+++++.............-.++..+-.+    ......++|+||.++
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA  390 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV  390 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence            4567889999999999999988876653368999999866543322111111122222111    122235899999876


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus       391 a  391 (660)
T PRK08125        391 A  391 (660)
T ss_pred             c
Confidence            5

>PRK05876 short chain dehydrogenase; Provisional

Probab=92.89  E-value=0.27  Score=42.38  Aligned_cols=42  Identities=24%  Similarity=0.328  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~-G~~Vv~~~r~~~~l~~~   46 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARR-GARVVLGDVDKPGLRQA   46 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877764 99999999887766544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.88  E-value=1.4  Score=36.96  Aligned_cols=33  Identities=21%  Similarity=0.352  Sum_probs=27.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      +.+++|+|++|.+|...+.-+... |+++++..+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~-g~~v~~~~~   38 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKE-GSLVVVNAK   38 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeC
Confidence            579999999999999877766664 898877665

>PRK07791 short chain dehydrogenase; Provisional

Probab=92.88  E-value=0.74  Score=39.87  Aligned_cols=37  Identities=24%  Similarity=0.374  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      -.+.+++|+|+++++|.+.+..+... |++|++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~-G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEeeCCc
Confidence            35789999999999999977766664 99998887654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.85  E-value=0.38  Score=41.65  Aligned_cols=51  Identities=25%  Similarity=0.294  Sum_probs=43.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLG  196 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g  196 (310)
                      ..+.+|.-.|+|.|++.++|++.+..++.. |++|.++.++.+++..+. .++
T Consensus        27 ~~~~k~~~hi~itggS~glgl~la~e~~~~-ga~Vti~ar~~~kl~~a~~~l~   78 (331)
T KOG1210|consen   27 IVKPKPRRHILITGGSSGLGLALALECKRE-GADVTITARSGKKLLEAKAELE   78 (331)
T ss_pred             hcccCccceEEEecCcchhhHHHHHHHHHc-cCceEEEeccHHHHHHHHhhhh
Confidence            356677789999999999999999999985 999999999999998884 444

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=92.85  E-value=0.98  Score=39.95  Aligned_cols=92  Identities=18%  Similarity=0.238  Sum_probs=55.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhc---CCcEEEEec--ChhhHHHHHHcCCC--------------EEeeCC------C--
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVF---GASKVAATS--STAKLDLLRSLGAD--------------LAIDYT------K--  205 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~---g~~vi~~~~--~~~~~~~~~~~g~~--------------~~~~~~------~--  205 (310)
                      +|.|.| .|.+|...++.+....   ..+++.+..  +.+-+.++-++.-.              .+++..      .  
T Consensus         1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            478999 5999999999877631   256666543  33334444332210              011100      0  


Q ss_pred             -CcccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          206 -ENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       206 -~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                       +.......++|+||+|+|.   .+.+.+++..|++.+.++.+.
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~  123 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG  123 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence             1111123489999999994   477788888888999887653

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=92.83  E-value=0.13  Score=45.25  Aligned_cols=70  Identities=20%  Similarity=0.297  Sum_probs=46.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +|+|+|++|.+|...++.+... |.+|+++++++++...+.+.+...+ .+..+ +.......++|+||++++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQ-GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHC-CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            6899999999999988887774 8999999997766543333333222 12222 112223347899998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.82  E-value=0.71  Score=39.81  Aligned_cols=96  Identities=22%  Similarity=0.264  Sum_probs=64.4

Q ss_pred             cccchHHHHHHHHHhcccC-CCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          131 SLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~~-~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ..||+....+..++..+.. .|.+++|.|.+..+|.-...++... .++.|+++-+..                   .++
T Consensus       137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T-------------------~~l  197 (284)
T PRK14193        137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT-------------------RDL  197 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC-------------------CCH
Confidence            3566655555555555543 6999999999999998877777651 267666554321                   222


Q ss_pred             cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      .+..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus       198 ~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~  235 (284)
T PRK14193        198 AAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             HHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccc
Confidence            333457899999999542 2346788999999998654

>PRK06101 short chain dehydrogenase; Provisional

Probab=92.80  E-value=0.26  Score=41.44  Aligned_cols=43  Identities=21%  Similarity=0.330  Sum_probs=35.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~  195 (310)
                      .+++|+|++|++|...+..+... |++|+++++++++++.+.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQ-GWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHh
Confidence            47899999999999877666664 99999999998887766543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=92.80  E-value=0.29  Score=41.47  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |.+|+++.+++++.+.+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   47 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARA-GAAVAIADLNQDGANAV   47 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Confidence            4789999999999999988877774 99999999988665443

>PRK12743 oxidoreductase; Provisional

Probab=92.78  E-value=0.66  Score=39.31  Aligned_cols=39  Identities=13%  Similarity=0.136  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLD  190 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~  190 (310)
                      +++++|+|+++.+|...++.+... |++|+++.+ +.++.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~-G~~V~~~~~~~~~~~~   41 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ-GFDIGITWHSDEEGAK   41 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCChHHHH
Confidence            468999999999999988887774 999988765 444443

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=92.77  E-value=0.77  Score=39.11  Aligned_cols=89  Identities=19%  Similarity=0.299  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCccc-ccCCCccEEEe
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIE-DLPEKFDVVFD  220 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~-~~~~~~dvvi~  220 (310)
                      .++.+||=.|  .+.|..+..+++.  +.+|+.++.+++.++.+++    .|..   .++..+..+.. ...+.+|+|+.
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~--g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~  118 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL--GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILF  118 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEe
Confidence            4567888887  5567888888875  7899999999998877754    2321   12222222221 12357999985


Q ss_pred             CCC-----C----hHHHHhhcccCCEEEEE
Q 021628          221 AVG-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      ...     .    +..+.+.|+|+|+++.+
T Consensus       119 ~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        119 HAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             hhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            532     2    36788999999999765

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=92.75  E-value=0.94  Score=39.38  Aligned_cols=95  Identities=27%  Similarity=0.282  Sum_probs=65.9

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..+ .-.|.+|+|.|-+..+|.=...++... ++.|+++-..-.                   +..
T Consensus       146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~-~ATVtvchs~T~-------------------nl~  205 (299)
T PLN02516        146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKA-DATVTVVHSRTP-------------------DPE  205 (299)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            45666555555555443 345999999999999999888888874 888887744321                   122


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus       206 ~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~  242 (299)
T PLN02516        206 SIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccc
Confidence            23457889999998532 2346788999999998544

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=92.75  E-value=0.41  Score=42.83  Aligned_cols=74  Identities=22%  Similarity=0.240  Sum_probs=47.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHc--CCC-EEeeCCCCc---ccccCCCccEEEeC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL--GAD-LAIDYTKEN---IEDLPEKFDVVFDA  221 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~--g~~-~~~~~~~~~---~~~~~~~~dvvi~~  221 (310)
                      ..+.+|||+|++|.+|...++.+... |.+|++++++.++...+ ..+  +.. .++..+-.+   +.....++|.||.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQR-GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            35678999999999999988887774 99999988876654433 222  111 122221111   22223468899887


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      ++
T Consensus        87 A~   88 (353)
T PLN02896         87 AA   88 (353)
T ss_pred             Cc
Confidence            65

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=92.75  E-value=0.89  Score=39.30  Aligned_cols=103  Identities=19%  Similarity=0.263  Sum_probs=70.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh------
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC------  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~------  225 (310)
                      +|..+| -|.+|.-.++=+... |..+.+.++++++ .+.+++.|+...-     +..+....+|+||-|.++.      
T Consensus         2 kIafIG-LG~MG~pmA~~L~~a-G~~v~v~~r~~~ka~~~~~~~Ga~~a~-----s~~eaa~~aDvVitmv~~~~~V~~V   74 (286)
T COG2084           2 KIAFIG-LGIMGSPMAANLLKA-GHEVTVYNRTPEKAAELLAAAGATVAA-----SPAEAAAEADVVITMLPDDAAVRAV   74 (286)
T ss_pred             eEEEEc-CchhhHHHHHHHHHC-CCEEEEEeCChhhhhHHHHHcCCcccC-----CHHHHHHhCCEEEEecCCHHHHHHH
Confidence            577888 889987655544443 8999999999998 8888888865332     1233456889999998742      


Q ss_pred             ----HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          226 ----DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                          .-.++.++++..++.++            +..++.-+++-+.++++.+.
T Consensus        75 ~~g~~g~~~~~~~G~i~IDmS------------Tisp~~a~~~a~~~~~~G~~  115 (286)
T COG2084          75 LFGENGLLEGLKPGAIVIDMS------------TISPETARELAAALAAKGLE  115 (286)
T ss_pred             HhCccchhhcCCCCCEEEECC------------CCCHHHHHHHHHHHHhcCCc
Confidence                23445666777777775            24455666666666665544

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.74  E-value=0.81  Score=39.44  Aligned_cols=95  Identities=21%  Similarity=0.224  Sum_probs=66.3

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..+. -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-..                   +.
T Consensus       136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~-~atVt~chs~T~n-------------------l~  195 (282)
T PRK14166        136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKTKD-------------------LS  195 (282)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCCC-------------------HH
Confidence            457665555555555443 47999999999999999988888874 8888766543222                   22


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|..+ -.-+++++|..++.+|...
T Consensus       196 ~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~  232 (282)
T PRK14166        196 LYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINR  232 (282)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccc
Confidence            23457899999999542 2335788999999998543

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=92.72  E-value=0.8  Score=39.85  Aligned_cols=72  Identities=17%  Similarity=0.250  Sum_probs=42.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChh---hHHHH-HHcCCC-----EEeeCCCC-cccccCCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTA---KLDLL-RSLGAD-----LAIDYTKE-NIEDLPEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~---~~~~~-~~~g~~-----~~~~~~~~-~~~~~~~~~dvv  218 (310)
                      .+.+++|+| +|+.+.+.+..+..+ |+ +++++.|+++   |.+.+ ++++..     .+....+. .+.+....+|+|
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~-g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            567999999 788888766655554 65 7778888753   54444 344321     11111110 011223478999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+|++
T Consensus       201 INaTp  205 (288)
T PRK12749        201 TNGTK  205 (288)
T ss_pred             EECCC
Confidence            99975

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.72  E-value=0.58  Score=39.81  Aligned_cols=35  Identities=23%  Similarity=0.297  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|++++|+|++  +++|.+.+..+... |++|+++.++
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~-G~~v~~~~r~   42 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNA-GAKLVFTYAG   42 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEecCc
Confidence            47899999976  79999977766664 9999988654

>PRK07024 short chain dehydrogenase; Provisional

Probab=92.70  E-value=0.3  Score=41.46  Aligned_cols=41  Identities=17%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+|+|+|++|.+|...+..+... |++|+++++++++++.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~-G~~v~~~~r~~~~~~~~   42 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ-GATLGLVARRTDALQAF   42 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988877764 99999999988877655

>PRK06125 short chain dehydrogenase; Provisional

Probab=92.70  E-value=0.31  Score=41.39  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|...++.+... |++|+++.+++++.+.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAE-GCHLHLVARDADALEAL   47 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776554

>PRK07904 short chain dehydrogenase; Provisional

Probab=92.67  E-value=0.32  Score=41.34  Aligned_cols=41  Identities=22%  Similarity=0.256  Sum_probs=32.4

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +..+.+|+|+|+++++|.+.++-+...+|++|+++++++++
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~   45 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDP   45 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcch
Confidence            34577999999999999998875444335899999998765

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=92.66  E-value=0.57  Score=41.53  Aligned_cols=92  Identities=12%  Similarity=0.138  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-H---HcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-R---SLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~---~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +...++.|+| +|..|.+.+..+..... .++.+.++++++.+.+ +   +++.....   ..+..+..+++|+|+-|++
T Consensus       126 ~~~~~lgiiG-~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~---~~~~~eav~~aDiVitaT~  201 (325)
T TIGR02371       126 KDSSVLGIIG-AGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA---ATDPREAVEGCDILVTTTP  201 (325)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE---eCCHHHHhccCCEEEEecC
Confidence            4567899999 99999886665444334 4677888998887655 3   33432111   1123344568999999886


Q ss_pred             ChH--HHHhhcccCCEEEEEeCC
Q 021628          224 QCD--KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       224 ~~~--~~~~~l~~~G~~v~~g~~  244 (310)
                      +.+  --.++++++-.+..+|.+
T Consensus       202 s~~P~~~~~~l~~g~~v~~vGs~  224 (325)
T TIGR02371       202 SRKPVVKADWVSEGTHINAIGAD  224 (325)
T ss_pred             CCCcEecHHHcCCCCEEEecCCC
Confidence            421  224577898888888854

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=92.65  E-value=0.62  Score=32.86  Aligned_cols=83  Identities=28%  Similarity=0.365  Sum_probs=52.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcC---CcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC--Ch
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFG---ASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QC  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g---~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~  225 (310)
                      +|.++| +|.+|.+.+.-.... |   .+++++ .+++++.+.+ ++++...+..    +..+..+..|+||-|+.  ..
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~-g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~advvilav~p~~~   74 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLAS-GIKPHEVIIVSSRSPEKAAELAKEYGVQATAD----DNEEAAQEADVVILAVKPQQL   74 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHT-TS-GGEEEEEEESSHHHHHHHHHHCTTEEESE----EHHHHHHHTSEEEE-S-GGGH
T ss_pred             CEEEEC-CCHHHHHHHHHHHHC-CCCceeEEeeccCcHHHHHHHHHhhccccccC----ChHHhhccCCEEEEEECHHHH
Confidence            477888 999999887776664 7   788855 8999998887 5566433321    11222346899999986  23


Q ss_pred             HHHH---hhcccCCEEEEE
Q 021628          226 DKAL---KAVKEGGRVVSI  241 (310)
Q Consensus       226 ~~~~---~~l~~~G~~v~~  241 (310)
                      ...+   ....++..++++
T Consensus        75 ~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   75 PEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHhhccCCCEEEEe
Confidence            3333   445566666655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02686 cinnamoyl-CoA reductase

Probab=92.64  E-value=0.39  Score=43.36  Aligned_cols=45  Identities=20%  Similarity=0.264  Sum_probs=35.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      ..+.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~-G~~V~~~~r~~~~~~~l~~   95 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRH-GYSVRIAVDTQEDKEKLRE   95 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence            45789999999999999998877774 9999988887665544433

>PRK08628 short chain dehydrogenase; Provisional

Probab=92.64  E-value=0.28  Score=41.59  Aligned_cols=43  Identities=26%  Similarity=0.355  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .+.+++|+|++|.+|...+..+... |++++++++++++.+..+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~   48 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEE-GAIPVIFGRSAPDDEFAE   48 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCcEEEEcCChhhHHHHH
Confidence            4679999999999999977766664 999999998877664443

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.62  E-value=0.43  Score=39.97  Aligned_cols=41  Identities=32%  Similarity=0.490  Sum_probs=32.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |++++++ .+++++.+.+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~-g~~v~~~~~r~~~~~~~~   46 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKE-GAKVVIAYDINEEAAQEL   46 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            568999999999999888766664 9999888 8877665443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=92.62  E-value=0.51  Score=45.80  Aligned_cols=90  Identities=17%  Similarity=0.243  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCccc--ccCCCccEEEeCCCCh--
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIE--DLPEKFDVVFDAVGQC--  225 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~~dvvi~~~g~~--  225 (310)
                      .++|+|.| .|.+|+..++.++.. |.++++++.++++.+.+++.|...+. |..+.+.-  ...+.+|.++-+.++.  
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~  477 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSS-GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT  477 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHH
Confidence            36899999 999999999988884 99999999999999999988865433 22222211  2234789999888752  


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          -...+.+.|.-+++.-.
T Consensus       478 n~~i~~~ar~~~p~~~iiaRa  498 (621)
T PRK03562        478 SLQLVELVKEHFPHLQIIARA  498 (621)
T ss_pred             HHHHHHHHHHhCCCCeEEEEE
Confidence                23445555665665443

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=92.60  E-value=0.66  Score=34.95  Aligned_cols=86  Identities=26%  Similarity=0.432  Sum_probs=53.7

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcC--CcEEEEec--ChhhH-HHHHHcCCCEEeeCCCCcccc------------------
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFG--ASKVAATS--STAKL-DLLRSLGADLAIDYTKENIED------------------  210 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~--~~~~~-~~~~~~g~~~~~~~~~~~~~~------------------  210 (310)
                      |.|+|++|.+|.-++.+.+.. .  .+++....  +-+++ +.+++|.+.++.-.+++....                  
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            679999999999999999985 5  56776653  44443 344778887776544322110                  


Q ss_pred             -----c--CCCccEEEeCC-C--ChHHHHhhcccCCEEEE
Q 021628          211 -----L--PEKFDVVFDAV-G--QCDKALKAVKEGGRVVS  240 (310)
Q Consensus       211 -----~--~~~~dvvi~~~-g--~~~~~~~~l~~~G~~v~  240 (310)
                           .  ...+|+|+.+. |  .+.-.+..+..+-++.+
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                 0  13689999884 5  35777777776655543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06128 oxidoreductase; Provisional

Probab=92.53  E-value=0.75  Score=40.14  Aligned_cols=35  Identities=20%  Similarity=0.300  Sum_probs=29.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .+.++||+|+++.+|.+.+..+... |++|+++.++
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~i~~~~   88 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFARE-GADIALNYLP   88 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHc-CCEEEEEeCC
Confidence            4689999999999999988877764 9999887654

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.49  E-value=1.4  Score=37.87  Aligned_cols=95  Identities=26%  Similarity=0.326  Sum_probs=66.5

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..++ -.|++|+|.|.+..+|.-...++... ++.|+++-+.-.                   ++.
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~AtVt~chs~T~-------------------~l~  196 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNE-NATVTICHSKTK-------------------NLK  196 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            456665555555555443 47999999999999999988888874 887877654322                   222


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus       197 ~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        197 EVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccc
Confidence            33457899999999542 2346788999999998544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=92.49  E-value=0.33  Score=41.09  Aligned_cols=42  Identities=29%  Similarity=0.468  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|...+..+... |++++++++++++.+.+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~-G~~vvl~~r~~~~~~~~   49 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEY-GAEIIINDITAERAELA   49 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcCCHHHHHHH
Confidence            4678999999999999988877764 99999999987765444

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.41  E-value=0.69  Score=39.31  Aligned_cols=36  Identities=31%  Similarity=0.362  Sum_probs=29.1

Q ss_pred             CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .+.+++|+|+  ++++|.+.++.+... |++|+++.++.
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~-G~~v~l~~r~~   43 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQ-GAEVVLTGFGR   43 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHC-CCEEEEecCcc
Confidence            4679999998  799999988766664 99999887653

>PRK09186 flagellin modification protein A; Provisional

Probab=92.39  E-value=0.34  Score=40.93  Aligned_cols=42  Identities=29%  Similarity=0.486  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~   44 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEA-GGIVIAADIDKEALNEL   44 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecChHHHHHH
Confidence            4689999999999999988877764 99999999887776544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=92.37  E-value=0.34  Score=41.05  Aligned_cols=43  Identities=33%  Similarity=0.382  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .+.+++|+|++|.+|...+..+... |.+|++++++.++.+.+.
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~-G~~v~~~~r~~~~~~~~~   47 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAE-GARVVIADIKPARARLAA   47 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHH
Confidence            3678999999999999988877774 999999999888766553

>PRK06823 ornithine cyclodeaminase; Validated

Probab=92.36  E-value=1.6  Score=38.58  Aligned_cols=92  Identities=13%  Similarity=0.190  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH----HcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +...++.|+| +|..+.+.++.....+.. +|.+..+++++.+.+.    +.+......   .+..+..+++|+|+.|++
T Consensus       126 ~d~~~l~iiG-~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~---~~~~~av~~ADIV~taT~  201 (315)
T PRK06823        126 QHVSAIGIVG-TGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT---LDAAEVAHAANLIVTTTP  201 (315)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE---CCHHHHhcCCCEEEEecC
Confidence            4567899999 999998887766654454 6778889988876542    223322211   122344578999999877


Q ss_pred             ChHH--HHhhcccCCEEEEEeCC
Q 021628          224 QCDK--ALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       224 ~~~~--~~~~l~~~G~~v~~g~~  244 (310)
                      +..-  -.+.++++-.+..+|.+
T Consensus       202 s~~P~~~~~~l~~G~hi~~iGs~  224 (315)
T PRK06823        202 SREPLLQAEDIQPGTHITAVGAD  224 (315)
T ss_pred             CCCceeCHHHcCCCcEEEecCCC
Confidence            4321  23578888888888854

>PRK12939 short chain dehydrogenase; Provisional

Probab=92.36  E-value=0.36  Score=40.53  Aligned_cols=42  Identities=31%  Similarity=0.381  Sum_probs=34.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |.+++++.+++++.+.+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~-G~~v~~~~r~~~~~~~~   47 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEA-GATVAFNDGLAAEAREL   47 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999998887765544

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=92.36  E-value=0.81  Score=44.24  Aligned_cols=91  Identities=12%  Similarity=0.129  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCccc--ccCCCccEEEeCCCCh--
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIE--DLPEKFDVVFDAVGQC--  225 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~--~~~~~~dvvi~~~g~~--  225 (310)
                      .++|+|.| .|.+|+..++.++.. +.++++++.++++.+.+++.|...+. |..+++.-  ...+.+|.++-+.++.  
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~-g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~  477 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMAN-KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPED  477 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhC-CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHH
Confidence            36899999 999999999988874 89999999999999999988865443 22222211  1234789999888753  


Q ss_pred             ----HHHHhhcccCCEEEEEeC
Q 021628          226 ----DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g~  243 (310)
                          -...+...|.-+++.-..
T Consensus       478 n~~i~~~~r~~~p~~~IiaRa~  499 (601)
T PRK03659        478 TMKIVELCQQHFPHLHILARAR  499 (601)
T ss_pred             HHHHHHHHHHHCCCCeEEEEeC
Confidence                234456667777776543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=92.34  E-value=0.37  Score=40.77  Aligned_cols=42  Identities=29%  Similarity=0.393  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|...+..+... |++|+++.+++++++.+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~-G~~v~~~~r~~~~~~~~   51 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGA-GAHVLVNGRNAATLEAA   51 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHc-CCeEEEEeCCHHHHHHH
Confidence            5789999999999999988876664 99999999987765443

>PRK09242 tropinone reductase; Provisional

Probab=92.30  E-value=0.36  Score=40.88  Aligned_cols=42  Identities=19%  Similarity=0.345  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++.+|...+..+... |++|+++.+++++.+.+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~   49 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGL-GADVLIVARDADALAQA   49 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877774 99999999988776544

>PRK00536 speE spermidine synthase; Provisional

Probab=92.30  E-value=0.87  Score=38.90  Aligned_cols=91  Identities=20%  Similarity=0.145  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc------ccc-cCCCccEEE-eC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN------IED-LPEKFDVVF-DA  221 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~-~~~~~dvvi-~~  221 (310)
                      ..++|||.|  |+=|.++-+++|.-  .+|+.++.+++=.+.++++-+..--..+++.      ..+ ..+.+|+|| |+
T Consensus        72 ~pk~VLIiG--GGDGg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         72 ELKEVLIVD--GFDLELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCeEEEEc--CCchHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            448999998  77788888999973  4888999898888877773211000011111      111 124699886 44


Q ss_pred             CCC---hHHHHhhcccCCEEEEEeCC
Q 021628          222 VGQ---CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       222 ~g~---~~~~~~~l~~~G~~v~~g~~  244 (310)
                      ...   .+.+.++|+++|.++.-+..
T Consensus       148 ~~~~~fy~~~~~~L~~~Gi~v~Qs~s  173 (262)
T PRK00536        148 EPDIHKIDGLKRMLKEDGVFISVAKH  173 (262)
T ss_pred             CCChHHHHHHHHhcCCCcEEEECCCC
Confidence            433   26788999999999987653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=92.26  E-value=0.36  Score=42.42  Aligned_cols=72  Identities=18%  Similarity=0.294  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH---Hc-CC--C-EEeeCC--C-CcccccCCCccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR---SL-GA--D-LAIDYT--K-ENIEDLPEKFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~---~~-g~--~-~~~~~~--~-~~~~~~~~~~dvvi~  220 (310)
                      +.+|+|+|++|-+|...+..+... |.+|++++++.++.....   .+ +.  . ..+..+  + ..+....+++|.||.
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQR-GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHC-CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            578999999999999988877774 999998888765432221   11 11  1 122221  1 112223357899998


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      +++
T Consensus        83 ~A~   85 (322)
T PLN02662         83 TAS   85 (322)
T ss_pred             eCC
Confidence            875

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.25  E-value=0.76  Score=39.45  Aligned_cols=37  Identities=27%  Similarity=0.490  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+.+++|+|+++.+|...+..+... |++|+++.++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~-G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARD-GANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEecccc
Confidence            4678999999999999988877664 999999988654

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=92.24  E-value=0.67  Score=36.28  Aligned_cols=84  Identities=19%  Similarity=0.301  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      .+++|.|+| .|.-|.+.++-+|.. |.+|++..+..+ ..+.+++-|... .     +..+..+..|+|+-..++    
T Consensus         3 ~~k~IAViG-yGsQG~a~AlNLrDS-G~~V~Vglr~~s~s~~~A~~~Gf~v-~-----~~~eAv~~aDvV~~L~PD~~q~   74 (165)
T PF07991_consen    3 KGKTIAVIG-YGSQGHAHALNLRDS-GVNVIVGLREGSASWEKAKADGFEV-M-----SVAEAVKKADVVMLLLPDEVQP   74 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHC-C-EEEEEE-TTCHHHHHHHHTT-EC-C-----EHHHHHHC-SEEEE-S-HHHHH
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHhC-CCCEEEEecCCCcCHHHHHHCCCee-c-----cHHHHHhhCCEEEEeCChHHHH
Confidence            578999999 899999999999995 999999998766 677777777531 1     223344578999998873    


Q ss_pred             --h-HHHHhhcccCCEEEEE
Q 021628          225 --C-DKALKAVKEGGRVVSI  241 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~  241 (310)
                        . ++....|+++-.+++.
T Consensus        75 ~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   75 EVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             HHHHHHHHHHS-TT-EEEES
T ss_pred             HHHHHHHHhhCCCCCEEEeC
Confidence              1 4555688888877655

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK06181 short chain dehydrogenase; Provisional

Probab=92.20  E-value=0.36  Score=41.07  Aligned_cols=41  Identities=27%  Similarity=0.468  Sum_probs=33.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...++.+... |++|+++++++++.+.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~-g~~Vi~~~r~~~~~~~~   41 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARA-GAQLVLAARNETRLASL   41 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            357999999999999988877774 89999999987665433

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=92.19  E-value=0.38  Score=40.59  Aligned_cols=42  Identities=29%  Similarity=0.320  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~-g~~v~~~~r~~~~~~~~   44 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKE-GAKVVIADLNDEAAAAA   44 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCHHHHHHH
Confidence            3579999999999999988877764 99999999988776544

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=92.17  E-value=0.65  Score=39.53  Aligned_cols=34  Identities=26%  Similarity=0.179  Sum_probs=26.9

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEec
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      .|.+++|+|++  +++|.+.+..+... |++|+++.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~-G~~v~~~~~   40 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAA-GAELGITYL   40 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHC-CCEEEEEec
Confidence            46899999975  79999977766664 999987754

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.16  E-value=1.8  Score=37.24  Aligned_cols=95  Identities=22%  Similarity=0.234  Sum_probs=65.6

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+....+..++..+. -.|.+|+|+|.+..+|.....++... ++.|++..+....+.                   
T Consensus       131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~-~atVtv~hs~t~~L~-------------------  190 (279)
T PRK14178        131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNA-DATVTICHSKTENLK-------------------  190 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhC-CCeeEEEecChhHHH-------------------
Confidence            446665445555554443 47899999998889999988888884 898888876543332                   


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|++|.++|... -.-++++++..++.+|...
T Consensus       191 ~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~  227 (279)
T PRK14178        191 AELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQ  227 (279)
T ss_pred             HHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccc
Confidence            22346889999998421 1123479999999998543

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=92.15  E-value=0.37  Score=42.47  Aligned_cols=93  Identities=15%  Similarity=0.161  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHc---CCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSL---GADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~---g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +...++.|+| +|.-+.+.+..+...++. +|.+..+++++.+.+ +++   +......   ++..+..+++|+|+-|++
T Consensus       126 ~~~~~l~viG-aG~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~---~~~~~av~~aDii~taT~  201 (313)
T PF02423_consen  126 PDARTLGVIG-AGVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAV---DSAEEAVRGADIIVTATP  201 (313)
T ss_dssp             TT--EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEE---SSHHHHHTTSSEEEE---
T ss_pred             CCCceEEEEC-CCHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceec---cchhhhcccCCEEEEccC
Confidence            4457899999 999999988877665565 677888898876555 333   2222211   122334568999999876


Q ss_pred             ChH----HHHhhcccCCEEEEEeCCC
Q 021628          224 QCD----KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       224 ~~~----~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..    --.+.++++-.+..+|.+.
T Consensus       202 s~~~~P~~~~~~l~~g~hi~~iGs~~  227 (313)
T PF02423_consen  202 STTPAPVFDAEWLKPGTHINAIGSYT  227 (313)
T ss_dssp             -SSEEESB-GGGS-TT-EEEE-S-SS
T ss_pred             CCCCCccccHHHcCCCcEEEEecCCC
Confidence            432    3346788888888888653

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR00452 methyltransferase, putative

Probab=92.15  E-value=2  Score=37.80  Aligned_cols=94  Identities=20%  Similarity=0.204  Sum_probs=57.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH---HHHc-C---CCEEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL---LRSL-G---ADLAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~---~~~~-g---~~~~~~~~~~~~~~~~~~~d  216 (310)
                      ......+|++|+=.| +|. |..+..++.. +...|+.++.++.-+..   ++++ +   ...+....-++... ...||
T Consensus       115 ~~l~~~~g~~VLDvG-CG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~~ie~lp~-~~~FD  190 (314)
T TIGR00452       115 PHLSPLKGRTILDVG-CGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPLGIEQLHE-LYAFD  190 (314)
T ss_pred             HhcCCCCCCEEEEec-cCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEECCHHHCCC-CCCcC
Confidence            344567789999999 655 7777777665 23468888888765433   2222 2   11222222122221 23699


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEE
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      +|+...-     +    +.++.+.|++||+++..
T Consensus       191 ~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle  224 (314)
T TIGR00452       191 TVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE  224 (314)
T ss_pred             EEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence            9986531     2    37888999999999864

Known examples to date are restricted to the proteobacteria.

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=92.11  E-value=0.56  Score=39.63  Aligned_cols=87  Identities=25%  Similarity=0.392  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc---------CCCEEeeCCCCcccccCCCccEEEeC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL---------GADLAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      |.+|+=.| +|+ |++...+|+.  |+.|+.++.+++-.+.+++-         +..+.+++.+.+.......||.|+..
T Consensus        90 g~~ilDvG-CGg-GLLSepLArl--ga~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~~~~fDaVvcs  165 (282)
T KOG1270|consen   90 GMKILDVG-CGG-GLLSEPLARL--GAQVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGLTGKFDAVVCS  165 (282)
T ss_pred             CceEEEec-cCc-cccchhhHhh--CCeeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhcccccceeeeH
Confidence            46777776 444 8999999996  89999999998887777532         12233455555555555568988754


Q ss_pred             CC-----C----hHHHHhhcccCCEEEEE
Q 021628          222 VG-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      -=     .    ++..++.|+|+|+++..
T Consensus       166 evleHV~dp~~~l~~l~~~lkP~G~lfit  194 (282)
T KOG1270|consen  166 EVLEHVKDPQEFLNCLSALLKPNGRLFIT  194 (282)
T ss_pred             HHHHHHhCHHHHHHHHHHHhCCCCceEee
Confidence            21     1    36788899999999765

>PRK05855 short chain dehydrogenase; Validated

Probab=92.09  E-value=0.63  Score=44.49  Aligned_cols=42  Identities=26%  Similarity=0.345  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|...++.+... |.+|+++.++.++++.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~-G~~v~~~~r~~~~~~~~  355 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFARE-GAEVVASDIDEAAAERT  355 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4578999999999999877776664 99999999988776554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=92.09  E-value=0.29  Score=43.77  Aligned_cols=38  Identities=24%  Similarity=0.293  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|.+|+|+|++|.+|...+..+... |.+|+++++++..
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~-G~~V~~~~r~~~~   40 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLEL-GAEVYGYSLDPPT   40 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHC-CCEEEEEeCCCcc
Confidence            3678999999999999988887774 9999999886654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=92.07  E-value=0.55  Score=41.55  Aligned_cols=74  Identities=22%  Similarity=0.234  Sum_probs=44.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHH-HHcCC-C-EEe--eCCC-CcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLL-RSLGA-D-LAI--DYTK-ENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~-~~~g~-~-~~~--~~~~-~~~~~~~~~~dvvi~~~  222 (310)
                      .|.+|+|+|++|.+|...+..+...+ +.+|+++++++.+...+ +.+.. . .++  +..+ +......+++|+||+++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            36789999999999999887666542 26788888766554333 22321 1 122  2111 11122234689999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus        83 g   83 (324)
T TIGR03589        83 A   83 (324)
T ss_pred             c
Confidence            6

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=92.05  E-value=1.8  Score=35.93  Aligned_cols=91  Identities=18%  Similarity=0.163  Sum_probs=58.2

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-----------------eeCCCCcc
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-----------------IDYTKENI  208 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-----------------~~~~~~~~  208 (310)
                      ...++.+||+.|  .+.|.-++.+|..  |.+|++++.++...+.+ ++.+....                 ...+-.++
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~~--G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAEQ--GHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHhC--CCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            445678999998  4568888888874  99999999999987765 33332110                 00100111


Q ss_pred             c-ccCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEE
Q 021628          209 E-DLPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       209 ~-~~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~  241 (310)
                      . .....+|.|+|..-  .         ...+.+.|+|+|++..+
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            1 11236899998753  1         26777899999875543

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=92.05  E-value=0.55  Score=35.37  Aligned_cols=78  Identities=26%  Similarity=0.350  Sum_probs=46.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHHHHH-cCCCEEeeCCCCcccccCCCccEEEeCCCC--hH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CD  226 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~  226 (310)
                      .-+|-|+| +|.+|......++.. |..|..+. ++.+..+.+.. ++...+.+     ..+..+.+|++|-++++  +.
T Consensus        10 ~l~I~iIG-aGrVG~~La~aL~~a-g~~v~~v~srs~~sa~~a~~~~~~~~~~~-----~~~~~~~aDlv~iavpDdaI~   82 (127)
T PF10727_consen   10 RLKIGIIG-AGRVGTALARALARA-GHEVVGVYSRSPASAERAAAFIGAGAILD-----LEEILRDADLVFIAVPDDAIA   82 (127)
T ss_dssp             --EEEEEC-TSCCCCHHHHHHHHT-TSEEEEESSCHH-HHHHHHC--TT----------TTGGGCC-SEEEE-S-CCHHH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEEeCCcccccccccccccccccc-----cccccccCCEEEEEechHHHH
Confidence            34789999 899999888888875 88887664 56666666654 33332332     23334578999998874  46


Q ss_pred             HHHhhcccC
Q 021628          227 KALKAVKEG  235 (310)
Q Consensus       227 ~~~~~l~~~  235 (310)
                      ..++.|...
T Consensus        83 ~va~~La~~   91 (127)
T PF10727_consen   83 EVAEQLAQY   91 (127)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHHHh
Confidence            666666554

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=92.05  E-value=0.72  Score=41.95  Aligned_cols=91  Identities=24%  Similarity=0.346  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCCh-
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~-  225 (310)
                      -.+.+|+++| +|-+|.+++..+... | .++++.-|+.+|...+ +++|...+ ..+  ........+|+||.+++++ 
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~-g~~~i~IaNRT~erA~~La~~~~~~~~-~l~--el~~~l~~~DvVissTsa~~  250 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEK-GVKKITIANRTLERAEELAKKLGAEAV-ALE--ELLEALAEADVVISSTSAPH  250 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHhCCeee-cHH--HHHHhhhhCCEEEEecCCCc
Confidence            4678999999 899998888777764 7 4677778888886655 78884332 111  1122345799999998742 


Q ss_pred             -----HHHHhhcccCCE--EEEEeCC
Q 021628          226 -----DKALKAVKEGGR--VVSIIGS  244 (310)
Q Consensus       226 -----~~~~~~l~~~G~--~v~~g~~  244 (310)
                           ......+.+.-+  ++..+.+
T Consensus       251 ~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         251 PIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cccCHHHHHHHHhcccCeEEEEecCC
Confidence                 333344444333  4455554

>PRK08251 short chain dehydrogenase; Provisional

Probab=92.02  E-value=0.4  Score=40.31  Aligned_cols=41  Identities=22%  Similarity=0.344  Sum_probs=33.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|++|...+..+... |++|+++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~-g~~v~~~~r~~~~~~~~   42 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAK-GRDLALCARRTDRLEEL   42 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            468999999999999877766554 89999999988876655

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=92.01  E-value=0.41  Score=39.97  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++.+++|+|++|.+|...+..+... |.+|+++.+++++.+.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~-g~~v~~~~r~~~~~~~~   45 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAAD-GAKVVIYDSNEEAAEAL   45 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCChhHHHHH
Confidence            3578999999999999988877774 99999999988775543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=92.00  E-value=0.34  Score=42.11  Aligned_cols=40  Identities=18%  Similarity=0.275  Sum_probs=32.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .+|.|+| +|.+|...+..+... |.+|++.++++++.+.+.
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~   41 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVS-GFQTTLVDIKQEQLESAQ   41 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhC-CCcEEEEeCCHHHHHHHH
Confidence            4689999 899998877766664 899999999999877764

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=91.96  E-value=0.99  Score=37.39  Aligned_cols=97  Identities=23%  Similarity=0.294  Sum_probs=66.1

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCCEE---eeC-CCCc-cc-ccCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADLA---IDY-TKEN-IE-DLPE  213 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~~---~~~-~~~~-~~-~~~~  213 (310)
                      .++.....+||-+|  +.+|..++.+|..+. ..+++.++.++++.+.++    +.|.+..   +.. +.-+ +. ...+
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~  131 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG  131 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence            45556788999998  778999999999874 357888888999887775    4564432   121 1111 11 1245


Q ss_pred             CccEEE-eCCC-C----hHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVF-DAVG-Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi-~~~g-~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      .+|+|| |+.- .    ++.+++.|++||.++.=..
T Consensus       132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv  167 (219)
T COG4122         132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV  167 (219)
T ss_pred             CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence            799885 6653 2    4899999999999986543

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.95  E-value=1.3  Score=38.22  Aligned_cols=93  Identities=26%  Similarity=0.324  Sum_probs=63.1

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..+. -.|.+|++.|.++.+|.-.+.++... |+.|++.-...+                   +..
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~-gatVtv~~s~t~-------------------~l~  196 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK-NATVTLTHSRTR-------------------NLA  196 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC-CCEEEEECCCCC-------------------CHH
Confidence            346665444444554443 57999999998899999888877774 898887722111                   223


Q ss_pred             ccCCCccEEEeCCCCh---HHHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQC---DKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~---~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+||-++|..   ..  .+++++..++.+|...
T Consensus       197 ~~~~~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin~  233 (284)
T PRK14179        197 EVARKADILVVAIGRGHFVTK--EFVKEGAVVIDVGMNR  233 (284)
T ss_pred             HHHhhCCEEEEecCccccCCH--HHccCCcEEEEeccee
Confidence            3345789999999853   22  3488899999888543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=91.94  E-value=0.41  Score=40.20  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~  191 (310)
                      .+.+++|+|++|.+|...+..+... |.+|++++++.++...
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~   45 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAAD-GAEVIVVDICGDDAAA   45 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHH
Confidence            4678999999999999988877764 8999999998665443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.93  E-value=0.45  Score=39.80  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~-G~~Vi~~~r~~~~~~~~   47 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKE-GVNVGLLARTEENLKAV   47 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            3578999999999999988876664 89999999987765443

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.93  E-value=1.4  Score=38.05  Aligned_cols=95  Identities=23%  Similarity=0.267  Sum_probs=65.2

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..++ -.|.+|+|.|.+..+|.-...++... ++.|+++-+.-.                   ++.
T Consensus       136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~AtVtichs~T~-------------------nl~  195 (282)
T PRK14182        136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLER-HATVTIAHSRTA-------------------DLA  195 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            356665555555554443 47999999999999999988888774 887776643221                   222


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|... -.-++++++..++.+|...
T Consensus       196 ~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~  232 (282)
T PRK14182        196 GEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNR  232 (282)
T ss_pred             HHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeecee
Confidence            33457899999998532 2346788899999998543

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=91.92  E-value=3.2  Score=38.32  Aligned_cols=96  Identities=21%  Similarity=0.169  Sum_probs=59.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-E--eeCCCCcccc--cCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-A--IDYTKENIED--LPEK  214 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~--~~~~  214 (310)
                      ....+++|++|+=.|  .+.|..+.++++.+.+.++++++.++++++.++    .+|... +  .+.+......  ....
T Consensus       232 ~~L~~~~g~~VLDlc--ag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~~~~~~~  309 (426)
T TIGR00563       232 TWLAPQNEETILDAC--AAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQWAENEQ  309 (426)
T ss_pred             HHhCCCCCCeEEEeC--CCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccccccccc
Confidence            445678999988876  334555556666542368999999999987763    456542 2  2221111111  1346


Q ss_pred             ccEEEe---CCC--C--------------------------hHHHHhhcccCCEEEEE
Q 021628          215 FDVVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       215 ~dvvi~---~~g--~--------------------------~~~~~~~l~~~G~~v~~  241 (310)
                      +|.||-   |+|  .                          +..+++.|+|||+++..
T Consensus       310 fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys  367 (426)
T TIGR00563       310 FDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA  367 (426)
T ss_pred             cCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            898873   333  1                          13577889999999855

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.90  E-value=0.81  Score=42.50  Aligned_cols=69  Identities=29%  Similarity=0.468  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhH----HHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKL----DLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+|+|+| .|.+|+.++..+... |++|++.+.++ +..    +.+.+.|...+. .+..+  ...+++|+|+.+.|
T Consensus         4 ~~k~v~iiG-~g~~G~~~A~~l~~~-G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~d~vv~~~g   77 (450)
T PRK14106          4 KGKKVLVVG-AGVSGLALAKFLKKL-GAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE--EFLEGVDLVVVSPG   77 (450)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch--hHhhcCCEEEECCC
Confidence            468999999 666999988888885 99999998864 222    333445544222 21111  22357899998887

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=91.89  E-value=2  Score=34.51  Aligned_cols=89  Identities=26%  Similarity=0.363  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE--EeeCCCCcccccCCCccEEEeCC-
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIEDLPEKFDVVFDAV-  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~dvvi~~~-  222 (310)
                      ++++|+=.|  .+.|..++.+++...+.+|+.++.+++..+.++    +.+.+.  ++..+..+. ...+.+|+|+... 
T Consensus        42 ~~~~vLDiG--cGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~~-~~~~~fD~I~s~~~  118 (181)
T TIGR00138        42 DGKKVIDIG--SGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAEDF-QHEEQFDVITSRAL  118 (181)
T ss_pred             CCCeEEEec--CCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhhc-cccCCccEEEehhh
Confidence            488999888  334566666665422468999999988665553    345432  233322222 1235799988653 


Q ss_pred             CC----hHHHHhhcccCCEEEEE
Q 021628          223 GQ----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g~----~~~~~~~l~~~G~~v~~  241 (310)
                      ..    .+.+.+.|+++|+++..
T Consensus       119 ~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       119 ASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             hCHHHHHHHHHHhcCCCCEEEEE
Confidence            22    25677889999999866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=91.84  E-value=0.51  Score=44.79  Aligned_cols=70  Identities=29%  Similarity=0.371  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+++|+| +|++|.+++..+... |++++++.++.++.+.+ ++++.. .+...+. ........|++++|++
T Consensus       378 ~~k~vlIlG-aGGagrAia~~L~~~-G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~-~~~~~~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIG-AGGAGKALAYGAKEK-GARVVIANRTYERAKELADAVGGQ-ALTLADL-ENFHPEEGMILANTTS  448 (529)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHh-hhhccccCeEEEeccc
Confidence            467899999 689999988888775 88888888888877666 445432 2222110 0011235789998875

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.80  E-value=1.3  Score=38.47  Aligned_cols=95  Identities=19%  Similarity=0.208  Sum_probs=65.9

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||+.......++..+ .-.|.+|+|.|.+..+|.-...++... ++.|+++-..-..                   +.
T Consensus       139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~-~aTVt~chs~T~~-------------------l~  198 (294)
T PRK14187        139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGE-NCTVTTVHSATRD-------------------LA  198 (294)
T ss_pred             ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhC-CCEEEEeCCCCCC-------------------HH
Confidence            45666555555555443 457999999999999999988888874 8888766543222                   22


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|..+ -.-++++++..++.+|...
T Consensus       199 ~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~  235 (294)
T PRK14187        199 DYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINS  235 (294)
T ss_pred             HHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccc
Confidence            23457899999999542 2346778899999998543

>PRK07102 short chain dehydrogenase; Provisional

Probab=91.77  E-value=0.42  Score=40.09  Aligned_cols=40  Identities=23%  Similarity=0.353  Sum_probs=33.5

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+++|+|++|.+|...+..+... |.+|+++++++++.+..
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~-G~~Vi~~~r~~~~~~~~   41 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAA-GARLYLAARDVERLERL   41 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence            57999999999999988877774 99999999988766543

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.75  E-value=2  Score=37.12  Aligned_cols=95  Identities=22%  Similarity=0.221  Sum_probs=66.4

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||.....+..++... .-.|.+|+|.|.+..+|.-...++... ++.|+++-+...                   ++.
T Consensus       137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~-~ATVt~chs~T~-------------------dl~  196 (282)
T PRK14180        137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRFTT-------------------DLK  196 (282)
T ss_pred             cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEEcCCCC-------------------CHH
Confidence            45766555555555443 346999999999999999988888874 888877654322                   222


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|..+ -.-++++++..++.+|...
T Consensus       197 ~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~  233 (282)
T PRK14180        197 SHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINH  233 (282)
T ss_pred             HHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccc
Confidence            23467899999999532 2236788999999998543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=91.75  E-value=1.1  Score=43.02  Aligned_cols=71  Identities=20%  Similarity=0.274  Sum_probs=52.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee-CCCCcc-c-ccCCCccEEEeCCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-YTKENI-E-DLPEKFDVVFDAVGQ  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~-~~~~~~dvvi~~~g~  224 (310)
                      ++++|.| .|.+|+..++.++.. |.++++++.++++.+.+++.+...+.. ..++.. . ...+.+|.++-+.++
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~-g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAA-GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCC
Confidence            7899999 999999999988884 899999999999999998887654442 222211 1 123478888777653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=91.71  E-value=0.42  Score=40.30  Aligned_cols=41  Identities=29%  Similarity=0.392  Sum_probs=34.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |.+|+++++++++.+.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~-g~~v~~~~r~~~~~~~~   41 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAA-GANVVVNDLGEAGAEAA   41 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            357999999999999988777664 89999999988776555

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN00198 anthocyanidin reductase; Provisional

Probab=91.71  E-value=0.56  Score=41.65  Aligned_cols=73  Identities=22%  Similarity=0.312  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH---HHc---CCCEEeeCC--CC-cccccCCCccEEEe
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSL---GADLAIDYT--KE-NIEDLPEKFDVVFD  220 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~---~~~---g~~~~~~~~--~~-~~~~~~~~~dvvi~  220 (310)
                      .+.+|+|+|++|-+|...+..+... |.+|++++++.++....   ..+   +.-.++..+  +. ......+++|.||+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQK-GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            3678999999999999988877774 89998888765443222   112   111222222  11 12222347899998


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      +++
T Consensus        87 ~A~   89 (338)
T PLN00198         87 VAT   89 (338)
T ss_pred             eCC
Confidence            875

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.70  E-value=1.5  Score=38.00  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=65.7

Q ss_pred             cccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ..||.....+..++..++ -.|.+|+|.|.+..+|.-..+++... ++.|+++-+.-.                   ++.
T Consensus       138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~-~ATVtichs~T~-------------------~L~  197 (288)
T PRK14171        138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKE-NCSVTICHSKTH-------------------NLS  197 (288)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHC-CCEEEEeCCCCC-------------------CHH
Confidence            456665444444554443 57999999999999999988888874 887776643222                   223


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+++.++|... -.-+++++|..++.+|...
T Consensus       198 ~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~  234 (288)
T PRK14171        198 SITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINR  234 (288)
T ss_pred             HHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccc
Confidence            33457899999999542 2346788999999998543

>PRK12937 short chain dehydrogenase; Provisional

Probab=91.65  E-value=1.1  Score=37.58  Aligned_cols=35  Identities=17%  Similarity=0.294  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .+.+++|+|++|.+|...+..+... |.+++++.++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~-g~~v~~~~~~   38 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAAD-GFAVAVNYAG   38 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEecCC
Confidence            5679999999999999988877774 8988877664

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=91.62  E-value=0.82  Score=41.17  Aligned_cols=89  Identities=24%  Similarity=0.307  Sum_probs=58.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEe--cChhhHHH-HHHcCCCEEeeCCCCcc-------c-----------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAAT--SSTAKLDL-LRSLGADLAIDYTKENI-------E-----------  209 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~-------~-----------  209 (310)
                      .+|.|+|++|++|..++...+... ..++++++  ++.+++.. ++++++.++.-.+....       .           
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            579999999999999999877532 35777665  45555444 47788877654332110       0           


Q ss_pred             ---cc--CCCccEEEeCCC---ChHHHHhhcccCCEEEE
Q 021628          210 ---DL--PEKFDVVFDAVG---QCDKALKAVKEGGRVVS  240 (310)
Q Consensus       210 ---~~--~~~~dvvi~~~g---~~~~~~~~l~~~G~~v~  240 (310)
                         +.  ...+|+|+++.+   .+..++..+..|-++.+
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence               00  125899999964   35677788876666554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=91.61  E-value=0.48  Score=41.69  Aligned_cols=43  Identities=26%  Similarity=0.269  Sum_probs=36.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.|.+++|+|+++++|..++.-+... |++|+...|+.++.+.+
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~-Ga~Vv~~~R~~~~~~~~   75 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALR-GAHVVLACRNEERGEEA   75 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhC-CCEEEEEeCCHHHHHHH
Confidence            45689999999999999988877774 89999999998776665

>PRK07589 ornithine cyclodeaminase; Validated

Probab=91.57  E-value=1  Score=40.26  Aligned_cols=92  Identities=14%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +.-.++.|+| +|.-+.+.++.+...+.. +|.+..+++++.+.+ +++.   .....   ..+..+..+++|+|+.|++
T Consensus       127 ~da~~l~iiG-aG~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~---~~~~~~av~~ADIIvtaT~  202 (346)
T PRK07589        127 PDSRTMALIG-NGAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVA---CRSVAEAVEGADIITTVTA  202 (346)
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEE---eCCHHHHHhcCCEEEEecC
Confidence            4557899999 999998887765554454 677888998886554 3332   22211   1123344568999999886


Q ss_pred             ChH----HHHhhcccCCEEEEEeCC
Q 021628          224 QCD----KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       224 ~~~----~~~~~l~~~G~~v~~g~~  244 (310)
                      +..    --.+++++|-.+..+|.+
T Consensus       203 S~~~~Pvl~~~~lkpG~hV~aIGs~  227 (346)
T PRK07589        203 DKTNATILTDDMVEPGMHINAVGGD  227 (346)
T ss_pred             CCCCCceecHHHcCCCcEEEecCCC
Confidence            422    223688999888888854

>PLN00016 RNA-binding protein; Provisional

Probab=91.51  E-value=0.88  Score=41.20  Aligned_cols=91  Identities=19%  Similarity=0.234  Sum_probs=56.6

Q ss_pred             CCCEEEEE----cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH-----------HHHcCCCEEeeCCCCccccc--C
Q 021628          150 AGKSILVL----GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL-----------LRSLGADLAIDYTKENIEDL--P  212 (310)
Q Consensus       150 ~g~~vlI~----g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~--~  212 (310)
                      ...+|+|+    |++|.+|...+..+... |.+|++++++++....           +...+...+. .+-.+....  .
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d~~~~~~~  128 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA-GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPADVKSKVAG  128 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHC-CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHHHHhhhcc
Confidence            34689999    99999999988877774 8999999987654321           1122333221 111112221  2


Q ss_pred             CCccEEEeCCCC----hHHHHhhcccC--CEEEEEe
Q 021628          213 EKFDVVFDAVGQ----CDKALKAVKEG--GRVVSII  242 (310)
Q Consensus       213 ~~~dvvi~~~g~----~~~~~~~l~~~--G~~v~~g  242 (310)
                      .++|+||++.+.    ....++.+...  .+|+.++
T Consensus       129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S  164 (378)
T PLN00016        129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS  164 (378)
T ss_pred             CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence            479999999762    24555555433  4788765

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=91.49  E-value=3.7  Score=38.05  Aligned_cols=95  Identities=21%  Similarity=0.244  Sum_probs=57.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHH----HcCCCE--EeeCCCCccc----ccCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLR----SLGADL--AIDYTKENIE----DLPE  213 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~----~~~~  213 (310)
                      ...+++|++|+=.|  .+.|.-+..+++.+.+ .++++++.++++++.++    .+|.+.  ++..+.....    ...+
T Consensus       247 ~l~~~~g~~VLDl~--ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~  324 (434)
T PRK14901        247 LLDPQPGEVILDAC--AAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQWRG  324 (434)
T ss_pred             HhCCCCcCEEEEeC--CCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccccccccc
Confidence            45678899887776  3345455555655422 47889999999887774    466543  2222222222    1124


Q ss_pred             CccEEE-e--CCC--C--------------------------hHHHHhhcccCCEEEEE
Q 021628          214 KFDVVF-D--AVG--Q--------------------------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       214 ~~dvvi-~--~~g--~--------------------------~~~~~~~l~~~G~~v~~  241 (310)
                      .||.|+ |  |+|  .                          +..+++.|++||+++..
T Consensus       325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            689887 3  343  1                          24667888999998744

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=91.49  E-value=2.7  Score=38.01  Aligned_cols=45  Identities=29%  Similarity=0.371  Sum_probs=37.2

Q ss_pred             HHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          141 EGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       141 ~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+++.... -.|.+|.|.| .|.+|..+++.+... |+++++++.+..
T Consensus       196 ~a~~~~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~-GAkvva~sds~g  241 (411)
T COG0334         196 EALKALGDDLEGARVAVQG-FGNVGQYAAEKLHEL-GAKVVAVSDSKG  241 (411)
T ss_pred             HHHHHcCCCcCCCEEEEEC-ccHHHHHHHHHHHHc-CCEEEEEEcCCC
Confidence            34444333 4899999999 999999999999986 999999988766

>PLN02214 cinnamoyl-CoA reductase

Probab=91.47  E-value=0.7  Score=41.21  Aligned_cols=73  Identities=19%  Similarity=0.306  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH--HHHHcC---CC-EEeeCC--C-CcccccCCCccEEEe
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD--LLRSLG---AD-LAIDYT--K-ENIEDLPEKFDVVFD  220 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~--~~~~~g---~~-~~~~~~--~-~~~~~~~~~~dvvi~  220 (310)
                      .+.+|+|+|++|.+|...+..+... |.+|++++++.++..  .++.+.   .. .++..+  + ..+.....++|+||.
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLER-GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            5678999999999999988877774 999999988765421  122221   11 122221  1 112222357999999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      +++
T Consensus        88 ~A~   90 (342)
T PLN02214         88 TAS   90 (342)
T ss_pred             ecC
Confidence            976

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=91.47  E-value=0.46  Score=40.29  Aligned_cols=35  Identities=29%  Similarity=0.415  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .+.+++|+|+++.+|.+.++.+... |++|+++.++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~-G~~v~~~~~~   48 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKA-GADIIITTHG   48 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCC
Confidence            5789999999999999988877774 9999999887

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=91.45  E-value=1  Score=36.45  Aligned_cols=71  Identities=25%  Similarity=0.374  Sum_probs=46.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCC--CEE-eeCC--C-Ccccc-------cCCCccE
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGA--DLA-IDYT--K-ENIED-------LPEKFDV  217 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~--~~~-~~~~--~-~~~~~-------~~~~~dv  217 (310)
                      ...+++|+.+++|.+..+.+... |+++.+.+.+.+ ..+.+++++.  ++. +..+  + .+...       .....++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~-Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKK-GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhc-CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            45689999999999988877774 999999988554 4455577774  333 2111  1 11110       1236789


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++|+|
T Consensus        94 lVncAG   99 (256)
T KOG1200|consen   94 LVNCAG   99 (256)
T ss_pred             EEEcCc
Confidence            999988

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=91.44  E-value=0.37  Score=37.72  Aligned_cols=80  Identities=19%  Similarity=0.273  Sum_probs=50.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC------CEEeeCC---CCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA------DLAIDYT---KENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|.|+| +|..|.+.+..+.. .|.+|.+..++++..+.+++-+.      +..+...   ..+..+..+++|+++-+++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~-~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLAD-NGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-CTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-cCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence            588999 99999998888877 48899999999988888865321      1111110   1122233468899999987


Q ss_pred             C--hHHHHhhccc
Q 021628          224 Q--CDKALKAVKE  234 (310)
Q Consensus       224 ~--~~~~~~~l~~  234 (310)
                      +  .+..++.+++
T Consensus        79 s~~~~~~~~~l~~   91 (157)
T PF01210_consen   79 SQAHREVLEQLAP   91 (157)
T ss_dssp             GGGHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhh
Confidence            4  2444444443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=91.40  E-value=4.1  Score=37.83  Aligned_cols=95  Identities=22%  Similarity=0.250  Sum_probs=56.9

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCCEE--eeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADLA--IDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~d  216 (310)
                      ....+.+|++||=.|+ | .|..+..+++.+. +.++++++.++++++.++    +.|.+.+  +..+...+. ....+|
T Consensus       244 ~~l~~~~g~~VLDlga-G-~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-~~~~fD  320 (445)
T PRK14904        244 LLLNPQPGSTVLDLCA-A-PGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSFS-PEEQPD  320 (445)
T ss_pred             HhcCCCCCCEEEEECC-C-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-cCCCCC
Confidence            4556788999888873 2 3434444444321 348999999999987764    4565432  222222211 123689


Q ss_pred             EEEe---CCCC----------------------------hHHHHhhcccCCEEEEE
Q 021628          217 VVFD---AVGQ----------------------------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       217 vvi~---~~g~----------------------------~~~~~~~l~~~G~~v~~  241 (310)
                      .|+-   |+|.                            +..+++.|++||+++..
T Consensus       321 ~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvys  376 (445)
T PRK14904        321 AILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYA  376 (445)
T ss_pred             EEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            8873   3331                            24667788999999865

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=91.40  E-value=4.9  Score=32.86  Aligned_cols=110  Identities=12%  Similarity=0.032  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCC-Cccc--ccCCCccEEEe
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTK-ENIE--DLPEKFDVVFD  220 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~--~~~~~~dvvi~  220 (310)
                      ++++|+-+| +| .|..+..+++...+.+++.++.+++..+.+++    .+..  .++..+. +.+.  .....+|.|+-
T Consensus        40 ~~~~VLDiG-cG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~  117 (202)
T PRK00121         40 DAPIHLEIG-FG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYL  117 (202)
T ss_pred             CCCeEEEEc-cC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEE
Confidence            678898888 44 47777788776434689999999998877743    2322  2233322 2222  11345888875


Q ss_pred             CCC-----------------ChHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          221 AVG-----------------QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       221 ~~g-----------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                      ...                 -++.+.+.|+|+|.++...             .....+.++++.+.+..+.
T Consensus       118 ~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~-------------~~~~~~~~~~~~~~~~g~~  175 (202)
T PRK00121        118 NFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT-------------DWEGYAEYMLEVLSAEGGF  175 (202)
T ss_pred             ECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc-------------CCHHHHHHHHHHHHhCccc
Confidence            321                 1367788999999998653             2345566677777665543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=91.38  E-value=0.51  Score=42.12  Aligned_cols=71  Identities=21%  Similarity=0.134  Sum_probs=43.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC----CcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~dvvi~~~g  223 (310)
                      +|+|+|++|-+|...+..+....+.+|++++++.++...+.....-.++..+-    +.+....+++|+||++++
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa   77 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA   77 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence            69999999999999888766533688999988765543332111111222211    112223357999998754

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=91.37  E-value=0.72  Score=43.20  Aligned_cols=68  Identities=15%  Similarity=0.338  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+++|+| +|++|.+++..+... |+++++..+++++.+.+ ++++.. .+...  +... ...+|+||+|++
T Consensus       331 ~~k~vlIiG-aGgiG~aia~~L~~~-G~~V~i~~R~~~~~~~la~~~~~~-~~~~~--~~~~-l~~~DiVInatP  399 (477)
T PRK09310        331 NNQHVAIVG-AGGAAKAIATTLARA-GAELLIFNRTKAHAEALASRCQGK-AFPLE--SLPE-LHRIDIIINCLP  399 (477)
T ss_pred             CCCEEEEEc-CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhccc-eechh--Hhcc-cCCCCEEEEcCC
Confidence            567899999 799999988877775 88888888888877655 333321 11111  1111 247899999986

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=91.31  E-value=1.3  Score=37.62  Aligned_cols=92  Identities=20%  Similarity=0.234  Sum_probs=58.6

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhh--cCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccEE
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~--~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dvv  218 (310)
                      +.++.+||-+| +|. |..+..+++..  .+.+++.++.+++-++.+++    .+..   .++..+-.+..  ...+|++
T Consensus        54 ~~~~~~vLDlG-cGt-G~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~d~~~~~--~~~~D~v  129 (247)
T PRK15451         54 VQPGTQVYDLG-CSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--IENASMV  129 (247)
T ss_pred             CCCCCEEEEEc-ccC-CHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeCChhhCC--CCCCCEE
Confidence            56889999998 443 66666676631  26789999999998877754    2221   12222211111  1357887


Q ss_pred             EeCCC-----------ChHHHHhhcccCCEEEEEeC
Q 021628          219 FDAVG-----------QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       219 i~~~g-----------~~~~~~~~l~~~G~~v~~g~  243 (310)
                      +.+..           .+++..+.|+|||.++....
T Consensus       130 v~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~  165 (247)
T PRK15451        130 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  165 (247)
T ss_pred             ehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            75432           13688889999999998763

>PRK07074 short chain dehydrogenase; Provisional

Probab=91.20  E-value=0.57  Score=39.63  Aligned_cols=41  Identities=27%  Similarity=0.396  Sum_probs=34.1

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |++++++++++++.+.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~-g~~v~~~~r~~~~~~~~   42 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAA-GDRVLALDIDAAALAAF   42 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            468999999999999988776664 89999999988776555

>PRK07832 short chain dehydrogenase; Provisional

Probab=91.14  E-value=0.52  Score=40.37  Aligned_cols=39  Identities=21%  Similarity=0.228  Sum_probs=32.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +++|+|++|++|...++.+... |++|+++.+++++++.+
T Consensus         2 ~vlItGas~giG~~la~~la~~-G~~vv~~~r~~~~~~~~   40 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQ-GAELFLTDRDADGLAQT   40 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            6899999999999988877774 99999988887765443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=91.14  E-value=0.82  Score=38.34  Aligned_cols=34  Identities=32%  Similarity=0.465  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      .+.+++|+|++|.+|...++.+... |+++++..+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~-G~~vv~~~~   35 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKD-GFKVVAGCG   35 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc-CCEEEEEcC
Confidence            3678999999999999988877775 998887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	310
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		5e-30
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-25
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		1e-24
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		7e-22
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		7e-22
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		6e-21
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		1e-20
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-17
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		2e-17
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-17
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		5e-17
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		5e-17
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		9e-17
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		2e-16
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		7e-16
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		2e-15
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		2e-15
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-15
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		3e-14
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		5e-14
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		1e-13
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		5e-13
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		8e-13
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		1e-12
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-12
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		7e-12
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		9e-12
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		1e-11
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		1e-11
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		2e-11
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-11
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		9e-11
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		1e-10
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-10
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-10
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-10
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		2e-10
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		2e-10
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-09
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-09
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		3e-09
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		1e-08
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		2e-08
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-08
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		5e-08
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		6e-08
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		7e-08
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		2e-07
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		4e-07
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		7e-07
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-06
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		1e-06
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		6e-06
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		1e-05
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		5e-05
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		9e-05
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		1e-04
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		1e-04
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		1e-04
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		2e-04
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		2e-04
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-04
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-04
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-04
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		3e-04
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		3e-04
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		7e-04
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		8e-04
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		8e-04
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-04
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		8e-04
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		9e-04
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		9e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  128 bits (321), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 168/368 (45%), Gaps = 77/368 (20%)
Query: 3   AWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLG----AFSATD 57
           AWV  +YG ++ VL+F  N+ +P +   ++V++KV AA++NPID     G    A +   
Sbjct: 24  AWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 58  SPL---------PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAE 108
            PL         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L+E
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTLSE 136
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGV 163
           +  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +GGV
Sbjct: 137 FVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGV 196
Query: 164 GTMVIQLAK----HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK---FD 216
           GT  IQ+ K    HV               +L+R LGAD  IDY   ++E+  +    FD
Sbjct: 197 GTFAIQVMKAWDAHVTAVCSQDAS------ELVRKLGADDVIDYKSGSVEEQLKSLKPFD 250
Query: 217 VVFDAVGQ----------------------------------CDKALK-AVKEGGRVVSI 241
            + D VG                                    D  L+  V  G + +  
Sbjct: 251 FILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKH 310
Query: 242 IGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRAT 301
                    +F + S G  L+ +    ++GK++ +I+    FPFS+  EAF  +E   A 
Sbjct: 311 FWKGVHYRWAFFMAS-GPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHAR 367
Query: 302 GKVVIHPI 309
           GK VI+ +
Sbjct: 368 GKTVINVV 375

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 25/237 (10%)
Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           N+++P  +  ++L+K+ + ++NP+D K+ L   S      P + G+D  GVVE VG++V 
Sbjct: 24  NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA----PRVLGFDAIGVVESVGNEVT 79
Query: 81  KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
            F  GD VY          P +NGS AEY  + E L+A  PKN+S  +A SLPL   TAY
Sbjct: 80  MFNQGDIVYYS------GSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAY 133
Query: 141 E------GLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLR 193
           E      G+ R+   + GK++L++ GAGGVG++  Q+AK  +G            ++  +
Sbjct: 134 ETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK-AYGLRVITTASRNETIEWTK 192
Query: 194 SLGADLAIDYTKENIEDLP----EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG 243
            +GAD+ +++ +  +        E  D VF         D  ++ VK  G + +I+ 
Sbjct: 193 KMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVA 249

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 156/321 (48%), Gaps = 28/321 (8%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-FSATD--S 58
           KA  + ++G  + VLK   +   P  R++Q LIKV AA+LNPID+K   G+ F A    +
Sbjct: 8   KAIQFDQFGPPK-VLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKN 65
Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            LP+  GYD +G V ++GS V    +GD+V G       DHP      AEY     + + 
Sbjct: 66  NLPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFP--DHP---CCYAEYVCASPDTII 120
Query: 119 LKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
            K + LSF++AASLP A  TA + L ++    G  +L+  GAGGVG + IQLAK      
Sbjct: 121 QKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ--KGT 178
Query: 179 XXXXXXXXXXLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAVGQ--CDKALKAVKEG 235
                        L++LGA+  I+Y +E+ +  +    D V D VG     +++  +KE 
Sbjct: 179 TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKET 238
Query: 236 GRVVSI----IGSVTPPA-----SSFVLTSDGSI--LEKLNPYFESGKVKAIIDPKGPFP 284
           G +VS+     G V   A      +F L    +I  L  L       K++  I+    F 
Sbjct: 239 GCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR--IEISRIFQ 296
Query: 285 FSQTLEAFSHLESSRATGKVV 305
            S+ + A   LE+    GK+V
Sbjct: 297 LSEAVTAHELLETGHVRGKLV 317

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 42/334 (12%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G  + VLK  +++ VP  ++ QVLIKV A  +NP++     G +S     L
Sbjct: 30  MRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS-RKPLL 87
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+             +G  AEY    ++ +   
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------TSSTISGGYAEYALAADHTVYKL 139
Query: 121 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXX 179
           P+ L F + A++ +   TAY  L  SA   AG+S+LV G +GGVG    Q+A+  +G   
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIAR-AYGLKI 198
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQCD--KALKA 231
                      ++   GA    ++ + N  D  +K+      D++ + +   +  K L  
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 232 VKEGGRVVSIIGS-----------VTPPASSFVLTSDGSILEKLNPY-------FESGKV 273
           +  GGRV+ ++GS           +   +S   +T   S  E+   Y        E G +
Sbjct: 259 LSHGGRVI-VVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWL 317
Query: 274 KAIIDPKGPFPFSQTLEAFSH-LESSRATGKVVI 306
           K +I  +  +P  +  EA  + +  S ATGK+++
Sbjct: 318 KPVIGSQ--YPLEKVAEAHENIIHGSGATGKMIL 349

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 162/355 (45%), Gaps = 62/355 (17%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V +  G  + VL+   ++ VP     +V +++ AAALN +D     G  S    PL
Sbjct: 1   MRAVVMRARGGPE-VLEV-ADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS-PKLPL 57
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDIN--------EKAL--------------D 98
           P + G D +GVV+ VG  V+ F  GDEV   IN        E+ L              +
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILGE 115
Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG-LERSAFSAGKSILVL 157
           H  R+G+ AEY  + E  LA KPKNLSF EAA++PL   TA++  +++     G  +LV+
Sbjct: 116 H--RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVM 173
Query: 158 GGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF-- 215
               GV    IQ+AK +FG            L   ++LGAD  ++YT     D P++   
Sbjct: 174 AAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRR 229
Query: 216 -------DVVFDAVGQC--DKALKAVKEGGRVVSIIGSVT------PPASSF-----VLT 255
                  D V D  G    +  +KA   GGR ++I G+ +      P A  F     +L 
Sbjct: 230 LTGGKGADKVVDHTGALYFEGVIKATANGGR-IAIAGASSGYEGTLPFAHVFYRQLSILG 288
Query: 256 SDGSILEKLNP---YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
           S  +   +L P   + E GK+K ++      P     E    LE  R  GKVV+ 
Sbjct: 289 STMASKSRLFPILRFVEEGKLKPVVGQV--LPLEAAAEGHRLLEERRVFGKVVLQ 341

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 20/183 (10%)
Query: 32  VLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY- 89
           +L++V A ++NP+D+K R       TD     + GYD AG+V  VG  V  F+ GDEV+ 
Sbjct: 55  ILVEVKAVSVNPVDYKVRRSTPPDGTDW---KVIGYDAAGIVSAVGPDVTLFRPGDEVFY 111
Query: 90  -GDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG------ 142
            G I         R G+ AE+  V+E ++  KPK L + EAA+LPL + TA+E       
Sbjct: 112 AGSI--------IRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLD 163
Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
           + +    A  +IL++GGAGGVG++ +Q+A+                 + ++SLGA   ID
Sbjct: 164 VNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID 223
Query: 203 YTK 205
           ++K
Sbjct: 224 HSK 226

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 25/226 (11%)
Query: 31  QVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
           QVL+++ A+  NP+D K   G       PLP I G D+AG V  VG +V  F+VGD V+G
Sbjct: 34  QVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFRVGDAVFG 93
Query: 91  DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS 149
                        G+ A++ AV+  LLA KP  L+  +A+ LPL   TA+EGL +R+   
Sbjct: 94  LTGGVG----GLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRAQVQ 149
Query: 150 AGKSILVLGGAGGVGTMVIQLA----KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTK 205
            G+++L+ GG GGVG + IQ+A      VF             L+ +R LGA   ID ++
Sbjct: 150 DGQTVLIQGGGGGVGHVAIQIALARGARVF------ATARGSDLEYVRDLGAT-PIDASR 202
Query: 206 ENIEDLP------EKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIG 243
           E  ED        + FD+V+D +G    D +  AVK  G VVS +G
Sbjct: 203 EP-EDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLG 247

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 140/327 (42%), Gaps = 57/327 (17%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
           VP   E  ++++ +A +LN  D K +L      D   P +P  D +GVVE VG  V +F+
Sbjct: 48  VPEAGEHDIIVRTLAVSLNYRD-KLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFR 106
Query: 84  VGDEVYGDINEKALD------------------HPKRNGSLAEYTAVEENLLALKPKNLS 125
            GD V        LD                  HP   G L+EY  + E      PK+L 
Sbjct: 107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP---GVLSEYVVLPEGWFVAAPKSLD 163
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXX 184
             EA++LP A  TA+  L E+    AG  ++V  G GGV    +Q+AK   G        
Sbjct: 164 AAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVALFGLQIAKAT-GAEVIVTSS 221
Query: 185 XXXXLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQC--DKALKAVK 233
               LD   +LGAD  I+  +   ED  E+          D + +  G     ++LKAV 
Sbjct: 222 SREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVA 278
Query: 234 EGGRVVSIIG-----SVTPPASSFVLTS---------DGSILEKLNPYFESGKVKAIIDP 279
             GR +S+IG      V+ P    +L S             LE L    +   +K +ID 
Sbjct: 279 PDGR-ISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDX 337
Query: 280 KGPFPFSQTLEAFSHLESSRATGKVVI 306
           +  + F++  EA +HL+     GKVVI
Sbjct: 338 R--YKFTEVPEALAHLDRG-PFGKVVI 361

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 153/362 (42%), Gaps = 82/362 (22%)
Query: 22  VEVPSLREDQVLIKVVAAALN----------PI-------DFKRMLGAFSATDSPLPTIP 64
           V +P L  D+VL+ V+A+++N          PI          R  G  +  D P   + 
Sbjct: 55  VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVL- 113
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEV--------------YGD----INEKALDHPKRNGSL 106
           G D +GVV + G  V+++K GD V              +GD      ++A       G L
Sbjct: 114 GSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGL 173
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL--ERSA-FSAGKSILVLGGAGGV 163
           AEY  V  + L  KP +L++ EAA  PL   TAY  L  +R A    G  +L+ G +GG+
Sbjct: 174 AEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGL 233
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF---- 215
           G+  IQ  K+  G               +R+LG DL I+  +    ++I D P +     
Sbjct: 234 GSYAIQFVKNGGGIPVAVVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETG 292
Query: 216 ---------------DVVFDAVGQCDKALKAV--KEGGRVVSIIGSVTPPASSF------ 252
                          D+VF+  G+    L  +  + GG VV+  GS +    +F      
Sbjct: 293 RKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVT-CGSSSGYLHTFDNRYLW 351
Query: 253 -----VLTSDGSILEK---LNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 304
                ++ S G+  E+    N  FESG V   +     +P ++  EA   +++SR  GKV
Sbjct: 352 MKLKKIVGSHGANHEEQQATNRLFESGAVVPAM--SAVYPLAEAAEACRVVQTSRQVGKV 409
Query: 305 VI 306
            +
Sbjct: 410 AV 411

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 149/339 (43%), Gaps = 50/339 (14%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVA 69
           LK E ++ +P  +  QVLIK+ AA +   D     G F            LP   G+++A
Sbjct: 13  LKLE-DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71
Query: 70  GVVEKVGSQVKKFKVGDEV------------YGDINEKAL-DHPK-----RNGSLAEYTA 111
           G +E+VG +V  +  GD V            Y  I E+ L D P+      +G+ AEY  
Sbjct: 72  GRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVL 131
Query: 112 VEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
           V       K + LS VEAA L  +  T Y  + +++    K+++V+G  GG+GTM IQ+A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPE--KFDVVFDAVGQC 225
           K V G            L+  +  GAD  I+ + ++    I  + +    D V D +   
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVID-LNNS 250
Query: 226 DKALKA-----VKEGGRV-VSIIGS--------VTPPASSFV--LTSDGSILEKLNPYFE 269
           +K L        K+G  V V + G+        +T     F+  L  + S    +    E
Sbjct: 251 EKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAE 310
Query: 270 SGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           +GKVK ++         +  EA  +LE+ +A G+ V+ P
Sbjct: 311 AGKVKPMVTKT--MKLEEANEAIDNLENFKAVGRQVLVP 347

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 151/347 (43%), Gaps = 54/347 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++   +  LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
           P IPG++  G+VE+VG  V   KVGD V          + D      E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + +  G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD 220
           G+G + +Q AK   G            L+L + LGADL ++  KE+    + EK   V  
Sbjct: 175 GLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233
Query: 221 AVGQC------DKALKAVKEGGRVVSIIGSVTPPASSFVLTSD---------GSI----- 260
           AV           A  +++ GG  V ++G   PP    +   D         GSI     
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACV-LVG--LPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 261 -LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            L++   +   GKVK II+ +   P  +  E F  +   +  G+VV+
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVL 334

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
            P L  DQV ++V A A+NP D K M G F+   + L    G D AG V  VGS V   +
Sbjct: 31  CPMLPRDQVYVRVEAVAINPSDTK-MRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
           VGD VYG  NE     P + G+ ++YT     + A  PK LSF +AA+LP    TA    
Sbjct: 86  VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
              GL   + SA +         +LV GG+    T+ +Q+ +                 D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
           L +S GA+   DY   N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 150/347 (43%), Gaps = 54/347 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++   +  LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQF---KEPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK-L 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----------YGDI----NEKALDHPKR---- 102
           P IPG++  G+VE+VG  V   KVGD V          + D      E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + +  G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIY-GIG 174
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIED-LPEKFDVVFD 220
           G G + +Q AK   G            L+L + LGADL ++  KE+    + EK   V  
Sbjct: 175 GFGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233
Query: 221 AVGQC------DKALKAVKEGGRVVSIIGSVTPPASSFVLTSD---------GSI----- 260
           AV           A  +++ GG  V ++G   PP    +   D         GSI     
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACV-LVG--LPPEEMPIPIFDTVLNGIKIIGSIVGTRK 290
Query: 261 -LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            L++   +   GKVK II+ +   P  +  E F  +   +  G+VV+
Sbjct: 291 DLQEALQFAAEGKVKTIIEVQ---PLEKINEVFDRMLKGQINGRVVL 334

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
            P L  DQV ++V A A+NP D   M G F+   + L    G D AG V  VGS V   +
Sbjct: 31  CPMLPRDQVYVRVEAVAINPSD-TSMRGQFATPWAFL----GTDYAGTVVAVGSDVTHIQ 85
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA---- 139
           VGD VYG  NE     P + G+ ++YT     + A  PK LSF +AA+LP    TA    
Sbjct: 86  VGDRVYGAQNEMCPRTPDQ-GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAM 144
Query: 140 -YEGLERSAFSAGKS--------ILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLD 190
              GL   + SA +         +LV GG+    T+ +Q+ +                 D
Sbjct: 145 KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATCSPHNFD 202
Query: 191 LLRSLGADLAIDYTKENI 208
           L +S GA+   DY   N+
Sbjct: 203 LAKSRGAEEVFDYRAPNL 220

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 81.3 bits (199), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 48/344 (13%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   YG   + L+ E  V+VP     QVL+K+ A+ +   D     G +     PL
Sbjct: 7   MKAAVVHAYG---APLRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPL 61
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------YGDINEKALDHPKRN---- 103
           P IPG++  G V  VGS V + K GD V             +     + L   ++N    
Sbjct: 62  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 104 --GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
             G  AEY   + N + + PKN+ F E A +  A  T Y+GL+++    G+ +  + G G
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWV-AISGIG 180
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKEN-----IEDLPEKFD 216
           G+G + +Q A+   G            L+L R LGA L ++  +E+       D+     
Sbjct: 181 GLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHG 239
Query: 217 VVFDAVGQC--DKALKAVKEGGRVVSI---IGSVTPPASSFVLTS---DGSI------LE 262
           V+  AV      +A+   + GG +  +    G    P    VL      GSI      L+
Sbjct: 240 VLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQ 299
Query: 263 KLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           +   +   G VKA I P      +Q L+    + + +  G++V+
Sbjct: 300 EALDFAGEGLVKATIHPGKLDDINQILD---QMRAGQIEGRIVL 340

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 49/324 (15%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           + W Y+   +S ++     +V++P+L  D +L++  A  +NP+D+K +    +  +    
Sbjct: 6   QVWAYQTKTHSVTL----NSVDIPALAADDILVQNQAIGINPVDWKFIKA--NPINWSNG 59
Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
            +PG D AGV+ KVG++V    +G  V    + K      R+GS AE+T +  + +   P
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAYHTSLK------RHGSFAEFTVLNTDRVXTLP 113
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL--GGAGGVGTMVIQLAKHVFGXXX 179
            NLSF  AA+LP    TA++  E+   +  + +L++  G    + T  +  A +V     
Sbjct: 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQXLNNAGYVVDLVS 173
Query: 180 XXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKA--LKAVKEGGR 237
                      L ++L A   + +       + +K+  +FDAV   + A  + ++K  G 
Sbjct: 174 A---------SLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGH 224
Query: 238 VVSIIGSVTPPAS-SFVLT-----------------SDGSIL----EKLNPYFESGKVKA 275
           ++ I   +  P   +F  T                  D  IL    E L      GK + 
Sbjct: 225 IICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILXQQGEALLTLIAQGKXE- 283
Query: 276 IIDPKGPFPFSQTLEAFSHLESSR 299
            I     F F Q +EA  H E ++
Sbjct: 284 -IAAPDIFRFEQXIEALDHSEQTK 306

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 54/324 (16%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  PS  E +VL+KV A+ALN  D  +  G +   D P     I G + +G V ++G   
Sbjct: 26  VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 82
Query: 80  K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           +  +K+GD     +           G  A+Y  V E LL   P+ L+  +AA++P A  T
Sbjct: 83  QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 133
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
           A++ L       AG  +L+  G  GVGT  IQL + + G            L +   LGA
Sbjct: 134 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 192
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
               +Y KE+  +   KF      +++ D +G    +K +  +   GR V   ++G   +
Sbjct: 193 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 252
Query: 246 TPPASSFVLTSDGSIL--------------------EKLNPYFES---GKVKAIIDPKGP 282
             P  S +L   GS++                    E++ P+F +    ++  ++D    
Sbjct: 253 NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRI-- 310
Query: 283 FPFSQTLEAFSHLESSRATGKVVI 306
           +P ++  EA  ++E+++  GK+V+
Sbjct: 311 YPVTEIQEAHKYMEANKNIGKIVL 334

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 54/324 (16%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP--LPTIPGYDVAGVVEKVGSQV 79
           V  PS  E +VL+KV A+ALN  D  +  G +   D P     I G + +G V ++G   
Sbjct: 42  VAKPSPGEGEVLLKVAASALNRADLMQRQGQY---DPPPGASNILGLEASGHVAELGPGC 98
Query: 80  K-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           +  +K+GD     +           G  A+Y  V E LL   P+ L+  +AA++P A  T
Sbjct: 99  QGHWKIGDTAMALL---------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT 149
Query: 139 AYEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
           A++ L       AG  +L+  G  GVGT  IQL + + G            L +   LGA
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGA 208
Query: 198 DLAIDYTKENIEDLPEKF------DVVFDAVG--QCDKALKAVKEGGRVV--SIIGS--V 245
               +Y KE+  +   KF      +++ D +G    +K +  +   GR V   ++G   +
Sbjct: 209 AAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI 268
Query: 246 TPPASSFVLTSDGSIL--------------------EKLNPYFES---GKVKAIIDPKGP 282
             P  S +L   GS++                    E++ P+F +    ++  ++D    
Sbjct: 269 NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRI-- 326
Query: 283 FPFSQTLEAFSHLESSRATGKVVI 306
           +P ++  EA  ++E+++  GK+V+
Sbjct: 327 YPVTEIQEAHKYMEANKNIGKIVL 350

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G   ++      V +P     Q+ + + A+ +   D     G +    +P 
Sbjct: 26  MKAAVVRAFGKPLTI----DEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP- 80
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR------------------ 102
           P IPG++  G V  VGS VK  K GD V       A  H +                   
Sbjct: 81  PFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYS 140
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG  AEY   + N +   PKN+ F E A +  A  T Y+GL+ +    G  + V+ G G
Sbjct: 141 VNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWV-VISGIG 199
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
           G+G M +Q A+   G            LDL R LGA + ++
Sbjct: 200 GLGHMAVQYAR-AMGLNVAAVDIDDRKLDLARRLGATVTVN 239

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 45/315 (14%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFK 83
           +P   E +VL++  A  +N  D  +  G++       P I G +++G +  VG  V  + 
Sbjct: 50  LPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASP-ILGLELSGEIVGVGPGVSGYA 108
Query: 84  VGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL 143
           VGD+V G  N          G+ AEY  +    +   PK    V+AA+LP    T +  L
Sbjct: 109 VGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANL 159
Query: 144 -ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
            + +  + G+S+L+ GG  G+GT  IQLA+  FG             +    LGA   I+
Sbjct: 160 FQXAGLTEGESVLIHGGTSGIGTTAIQLAR-AFGAEVYATAGSTGKCEACERLGAKRGIN 218
Query: 203 YTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVKEGG--RVVSIIGSVTP------ 247
           Y  E+       +  +  D++ D +G    ++ + ++ + G   +++ +G          
Sbjct: 219 YRSEDFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLS 278
Query: 248 PASSFVLTSDGS----------------ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291
           P     LT  GS                +L ++ P  E+G V  +I     F F    +A
Sbjct: 279 PIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKV--FAFEDVADA 336
Query: 292 FSHLESSRATGKVVI 306
              LE     GKV +
Sbjct: 337 HRLLEEGSHVGKVXL 351

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A V   +G    +  F     +P  ++ ++ I+V A  LN ID     G     D+P 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRK--AMPEPQDGELKIRVKACGLNFIDLMVRQGNI---DNPP 58
Query: 60  -LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
             P +PG++ +G+VE +G  VK +++GD V   +N  A          AE        + 
Sbjct: 59  KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA---------WAEVVCTPVEFVY 109
Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----- 172
             P ++SF EAA+ P+   TAY  L E +    G S+LV    GGVG  V QL       
Sbjct: 110 KIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNV 169
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALK 230
            VFG             D +  L  D   DY +E      E  D+V D +      K L 
Sbjct: 170 TVFGTASTFKHEAIK--DSVTHL-FDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLS 226
Query: 231 AVKEGGRVVSIIGS---VTPPASSFV-LTSDGSILEKLNP--YFESGKVKA 275
            +K  G  + + GS   VT    SF         +EK+NP   +E  KV A
Sbjct: 227 LLKPLGTYI-LYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIA 276

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G   ++      V VP     QV +K+ A+ +   D     G +    + L
Sbjct: 3   MKAAVVRAFGAPLTI----DEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPT-L 57
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV------------------YGDINEKALDHPKR 102
           P IPG++  G V  VGS V + K GD V                  +  + EK  +    
Sbjct: 58  PFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS 117
Query: 103 -NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG   EY   + N + L P  + FVE A +  A  T Y+GL+ +    G+ + V+ G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIG 176
Query: 162 GVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID 202
           G+G + +Q A+   G            L+L R LGA++A++
Sbjct: 177 GLGHVAVQYAR-AMGLRVAAVDIDDAKLNLARRLGAEVAVN 216

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 148/330 (44%), Gaps = 59/330 (17%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVVE               Y  +  +        G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G    
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
                   L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  + 
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSIIGSVTPPAS---------SFVLT---SDGSILEK----LNPYFESGKVKAII 277
            GGR+V I  +  PP            F LT    +G+++E+    L P     +++ ++
Sbjct: 210 HGGRLVYI--APIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRL-GRELRPVV 266
Query: 278 DPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
            P   FPF++   AF  L     TGKVV+ 
Sbjct: 267 GPV--FPFAEAEAAFRALLDRGHTGKVVVR 294

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP- 55
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVVE               Y  +  +        G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVVE------------GRRYAALVPQ--------GGLAERVAVPKGALLPL 95
Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXX 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G    
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AMGLRVL 154
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVK 233
                   L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  + 
Sbjct: 155 AAASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLA 209
Query: 234 EGGRVVSI 241
            GGR+V I
Sbjct: 210 HGGRLVYI 217

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 12  SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPT----IPGYD 67
           S   L+++ ++ VP  + +++LI V  + +   D     G     D PLP     + G++
Sbjct: 14  SHGKLEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHG-----DWPLPVKLPLVGGHE 67
Query: 68  VAGVVEKVGSQVKKFKVGDEV-------------YGDI-NEKALDHP-----KRNGSLAE 108
            AGVV  +G  VK +K+GD               Y ++ NE    H        +GS  +
Sbjct: 68  GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQ 127
Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
           Y   +    A  P+     + A +  A  T Y+ L+ +   AG  + + G AGG+G++ +
Sbjct: 128 YATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAV 187
Query: 169 QLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKE 206
           Q AK   G             +L RS+G ++ ID+TKE
Sbjct: 188 QYAK-AMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKE 224

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
           + VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+V
Sbjct: 18  IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76  GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
           G +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V     
Sbjct: 78  GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
             K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G 
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
                      ++  +  GAD  I+ + ++    I  + E    D V D +   +K L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNNSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
             KA+ + G+  +V + G+     +  +  S+    GS++   + +       E+GKVK 
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           +I         +  EA  +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 144/348 (41%), Gaps = 79/348 (22%)
Query: 21  NVEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS--ATDSPLP-TIP 64
           +V VP L   + L+ V+A+++N          P+    F    G  S  A    LP  + 
Sbjct: 62  DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVI 121
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDI-----------NEKALDHPKR-------NGSL 106
           G D+AGVV + G  V  ++ GDEV               N+  LD  +R        G L
Sbjct: 122 GSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGL 181
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
           AE   V+ N L  KP +LS+ EAA+  L   TAY  L     +    G ++L+ G +GG+
Sbjct: 182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGL 241
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAID--------YTKENIEDLPEKF 215
           G+   Q A    G             ++ R++GA+  ID        +  EN +D P+++
Sbjct: 242 GSYATQFAL-AGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQD-PKEW 299
Query: 216 DVVFDAVGQCDKALKAVKE--GGRVVSII----GSVTPPASSFVLTSDGSI--------- 260
                      +  K ++E  GG  + I+    G  T  AS FV    G+I         
Sbjct: 300 ----------KRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGY 349
Query: 261 LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           + + +  +    +K II       F+   EA+   E++R   K  IHP
Sbjct: 350 MHEYDNRYLWMSLKRIIGSH----FANYREAW---EANRLIAKGRIHP 390

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
           + VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+V
Sbjct: 18  IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76  GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
           G +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V     
Sbjct: 78  GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
             K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G 
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
                      ++  +  GAD  I+ + ++    I  + E    D V D +   +K L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNYSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
             KA+ + G+  +V + G+     +  +  S+    GS++   + +       E+GKVK 
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           +I         +  EA  +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
           + VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+V
Sbjct: 18  IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76  GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
           G +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V     
Sbjct: 78  GDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
             K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V G 
Sbjct: 138 MYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
                      ++  +  GAD  I+ + ++    I  + E    D V D +   +K L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNYSEKTLSV 256
Query: 230 --KAVKEGGR--VVSIIGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
             KA+ + G+  +V + G+     +  +  S+    GS++   + +       E+GKVK 
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
           +I         +  EA  +LE+ +A G+ V+ P
Sbjct: 317 MITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 137/338 (40%), Gaps = 61/338 (18%)
Query: 22  VEVPSLREDQVLIKVVAAALN----------PID---FKRMLGAFS----ATDSPLPTIP 64
           V VP L   + L+ V+A+++N          P+    F    G  S      D P   I 
Sbjct: 81  VPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHII- 139
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN------------------GSL 106
           G D+AGVV + G  V  ++ GDEV        L+ P  +                  G L
Sbjct: 140 GSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGL 199
Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGKSILVLGGAGGV 163
           AE   V+ N L  KPK+L++ EAA+  L   TAY  L     +A   G ++L+ G +GG+
Sbjct: 200 AEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGL 259
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG 223
           G+   Q A    G             ++ RS+GA+  ID   E  +   ++         
Sbjct: 260 GSYATQFAL-AGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWK 318
Query: 224 QCDKALKAVKEGGRVVSII----GSVTPPASSFVLTSDGSI---------LEKLNPYFES 270
           +  K ++ +  GG  + I+    G  T  AS +V    G+I         + + +  +  
Sbjct: 319 RFGKRIRELT-GGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGYMHEYDNRYLW 377
Query: 271 GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             +K II       F+   EA+   E++R   K  IHP
Sbjct: 378 MSLKRIIGSH----FANYREAY---EANRLIAKGKIHP 408

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 134/318 (42%), Gaps = 64/318 (20%)
Query: 32  VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVGDEV 88
           V+++  A  LN ID     G +     P P +P   G + AGVVE VG +V +FKVGD V
Sbjct: 31  VVVRNKAIGLNFIDTYYRSGLY-----PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV 85
Query: 89  -YGDINEKALDHPKRNGSLAEYTAV----EENLLALKPKNLSFVEAASLPLATETAYEGL 143
            YG             G L  Y+ V    E NL+ L   ++SF +AA+L L   T  + L
Sbjct: 86  AYG------------TGPLGAYSEVHVLPEANLVKLA-DSVSFEQAAALMLKGLTV-QYL 131
Query: 144 ERSAFSA--GKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI 201
            R  +    G+ IL    AGGVG++  Q AK   G                ++LGA   I
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAK-ALGAKLIGTVSSPEKAAHAKALGAWETI 190
Query: 202 DYTKENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTPPASSF- 252
           DY+ E++          +K  VV+D VGQ     +L +V   G VVS  G+ + P S   
Sbjct: 191 DYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVS-FGNASGPVSGVN 249
Query: 253 --VLTSDGSIL--------------------EKLNPYFESGKVKAIIDPKGPFPFSQTLE 290
             +L    S+                     ++L     SGK+K  +D    +      +
Sbjct: 250 LGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLK--VDGIEQYALKDAAK 307
Query: 291 AFSHLESSRATGKVVIHP 308
           A   L + R TG  ++ P
Sbjct: 308 AQIELSARRTTGSTILIP 325

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 40/303 (13%)
Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
           L + +V I + AA +N  D    LG +    S      G + AGVV + G  V     GD
Sbjct: 236 LGDGEVRIAMRAAGVNFRDALIALGMYPGVASL-----GSEGAGVVVETGPGVTGLAPGD 290
Query: 87  EVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER 145
            V G I       PK  G LA     +  ++   P   SF  AAS+P+   TAY  L + 
Sbjct: 291 RVMGMI-------PKAFGPLA---VADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDL 340
Query: 146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX-XXXXXXXXXXLDLLR-SLGADLAIDY 203
           +    G+S+LV   AGGVG   IQLA+H+               ++L R  L +    D+
Sbjct: 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDF 400
Query: 204 TKENIEDLPEK-FDVVFDAVGQ--CDKALKAVKEGGRVVSI----------IGSVTPPAS 250
            ++ +     +  DVV +++     D +L+ +  GGR + +          +    P  S
Sbjct: 401 EQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVS 460
Query: 251 SFVLTS-------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK 303
                +        G +L +L   FE   ++ +  P   +   Q  EA  HL  +R  GK
Sbjct: 461 YQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--PVTAWDVRQAPEALRHLSQARHVGK 518
Query: 304 VVI 306
           +V+
Sbjct: 519 LVL 521

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 133/318 (41%), Gaps = 56/318 (17%)
Query: 29  EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP---GYDVAGVVEKVGSQVKKFKVG 85
           E+++ ++  A  +N ID     G +     P P++P   G + AG+V KVGS VK  K G
Sbjct: 28  ENEIQVENKAIGINFIDTYIRSGLY-----PPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 82
Query: 86  DEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK----PKNLSFVEAASLPLATETAYE 141
           D V                +L  Y++V  N++A K    P  +SF +AA+  L   T Y 
Sbjct: 83  DRVV-----------YAQSALGAYSSV-HNIIADKAAILPAAISFEQAAASFLKGLTVYY 130
Query: 142 GLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLA 200
            L ++      +  L    AGGVG +  Q AK +                 L++ GA   
Sbjct: 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQV 189
Query: 201 IDYTKEN-IEDLPE-----KFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGS-------- 244
           I+Y +E+ +E L E     K  VV+D+VG+   +++L  ++  G +VS   S        
Sbjct: 190 INYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVN 249
Query: 245 -----------VTPPASSFVLTSDGSILEKLNPYFE---SGKVKAIIDPKGPFPFSQTLE 290
                      VT P+    +T+   + E  N  F    SG +K  +  +  +P      
Sbjct: 250 LGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQR 309
Query: 291 AFSHLESSRATGKVVIHP 308
           A   LES    G  ++ P
Sbjct: 310 AHEILESRATQGSSLLIP 327

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 43  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 101
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 102 EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 151
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 152 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 205
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 206 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 260
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 261 TKGRLIVI 268

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 14  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 72
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 73  EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 122
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 123 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 176
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 177 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 231
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 232 TKGRLIVI 239

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 39/248 (15%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAG 70
           N +  +    +  VP   +  +L++     +N  D     G +  +  P P   G++  G
Sbjct: 35  NFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP-PFDIGFEGIG 93
Query: 71  VVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL----ALKPKNLS 125
            V  +G S   ++ VG  V       A   P   GS AEYT V  ++     ++KP+ L+
Sbjct: 94  EVVALGLSASARYTVGQAV-------AYMAP---GSFAEYTVVPASIATPVPSVKPEYLT 143
Query: 126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK----HVFGXXXX 180
            + + +      TAY  L E    S GK +LV   AGG G   +QL+K    HV G    
Sbjct: 144 LLVSGT------TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS 197
Query: 181 XXXXXXXXLDLLRSLGADLAIDYTKENI-----EDLPEKFDVVFDAVGQC--DKALKAVK 233
                      L+SLG D  I+Y  E +     ++ PE  DVV+++VG    D A+ A+ 
Sbjct: 198 DEKSA-----FLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALA 252
Query: 234 EGGRVVSI 241
             GR++ I
Sbjct: 253 TKGRLIVI 260

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 6   YKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIP 64
           + ++GN + VL+ E  N+E   L++++V ++++   +NP D   + GA+ A   PLP IP
Sbjct: 10  FHKFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPLPNIP 66
Query: 65  GYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKR-NGSLAEYTAVEENLLALKPKN 123
           GY+  G+VE VG+ V +  +G  V           P R  G+  EY     + +   P +
Sbjct: 67  GYEGVGIVENVGAFVSRELIGKRVL----------PLRGEGTWQEYVKTSADFVVPIPDS 116
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG-GVGTMVIQLAKHVFGXXXXXX 182
           +    AA + +   TA+     +       +L++   G  +G +  QL++ +        
Sbjct: 117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176
Query: 183 XXXXXXLDLLRSLGADLAIDYTK----ENIEDLPEKF--DVVFDAVGQCD 226
                  +LLR LGA   ID +     E + +L      D   D++G  D
Sbjct: 177 RNNKHTEELLR-LGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPD 225

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 44/253 (17%)
Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           NV +P    D +L+KV A  +   D   + G F +T    P   G++  G+V + GS V+
Sbjct: 39  NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLGHEFCGIVVEAGSAVR 95
Query: 81  KFKVGDEVYGDINEKALDHPK------------------RNGSLAEYTAVE-----ENLL 117
               G  + GD N      P+                  R+G  AEY  V      E  L
Sbjct: 96  DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPL 155
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
            L P + +F E    PLA      G++ S   AG ++ +LGG G +G + +QLA+     
Sbjct: 156 TLDPVHGAFCE----PLA--CCLHGVDLSGIKAGSTVAILGG-GVIGLLTVQLARLAGAT 208
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKENIED--------LPEKFDVVFDAVGQCD--- 226
                        L   +GA   +D +  ++ +        +P   DVV +  G  +   
Sbjct: 209 TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVK 268
Query: 227 KALKAVKEGGRVV 239
           ++ +  K GG VV
Sbjct: 269 QSTRLAKAGGTVV 281

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 139/334 (41%), Gaps = 55/334 (16%)
Query: 21  NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           +V +P  + ++VLI++  A +   D +   G  +     LP I G++ AG + +VG ++ 
Sbjct: 20  DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVG-ELA 78
Query: 81  KFKVGDEV-----YGDINEKALDHPK-------------RNGSLAEYTAVEENLLALKPK 122
           K K GD V     +GD+  +     K              NG  +EY  V+ +   +K  
Sbjct: 79  KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKLN 138
Query: 123 NLSFVEAASLPLATETAYEGLER-----SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
           +LS VEAA L  A  T+   + +     S F+  + ++++ G GG+    IQ+ K +   
Sbjct: 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKFA--EPVVIVNGIGGLAVYTIQILKALMKN 196
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKE--NIEDLPEKF------DVVFDAVGQ----- 224
                          R    +L  DY  E  + E L  K        +  D VG      
Sbjct: 197 ITIVGISRSKK---HRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTY 253
Query: 225 -------CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD-GSI--LEKLNPYFESGKVK 274
                   + A+  V   G+ VS+    T   +  +L S+ GS+  LE +    ESGK+K
Sbjct: 254 NLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIK 313
Query: 275 AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             I      P     +AF++L+  R  G+ VI P
Sbjct: 314 PYII---KVPLDDINKAFTNLDEGRVDGRQVITP 344

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           E+ +++ ++ L+ +    +   D     G F    +   T+ G++  G+V+++G+ V   
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83  KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
           +VGD V         G        NE      K      +G +AE   V  +     P  
Sbjct: 77  QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
           L  +EA+S+  A  T Y+ ++ S    G   ++ G AGG+G + IQ AK+VFG       
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
                L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVTIN 214

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 49/333 (14%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD------SPLPTIPGYDVAGVVEKV 75
           + VP  +  QVLIKV AA +   D     G F            LP   G+++AG +E+V
Sbjct: 18  IGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 76  GSQVKKFKVGDEV------------YGDINEKAL-DHPKR-----NGSLAEYTAVEENLL 117
           G +V  +  GD V            Y  I E+ L D P+      +G+ AEY  V     
Sbjct: 78  GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY 137
Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGX 177
             K + L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GT  +Q+AK V G 
Sbjct: 138 XYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 178 XXXXXXXXXXXLDLLRSLGADLAIDYTKEN----IEDLPEK--FDVVFDAVGQCDKAL-- 229
                      ++  +  GAD  I+ + ++    I  + E    D V D +   +K L  
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVID-LNNSEKTLSV 256
Query: 230 --KAVKEGGRVVSI--IGSVTPPASSFVLTSD----GSILEKLNPYF------ESGKVKA 275
             KA+ + G+ V +   G+     +  +  S+    GS++   + +       E+GKVK 
Sbjct: 257 YPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXRLAEAGKVKP 316
Query: 276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
            I         +  EA  +LE+ +A G+ V+ P
Sbjct: 317 XITKT--XKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 23/199 (11%)
Query: 23  EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           E+ +++ ++ L+ +    +   D     G +    +   T+ G++  G+V+++G+ V   
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLHVAAGDYG---NKAGTVLGHEGIGIVKEIGADVSSL 76
Query: 83  KVGDEV--------YGDI------NEKALDHPKR-----NGSLAEYTAVEENLLALKPKN 123
           +VGD V         G        NE      K      +G +AE   V  +     P  
Sbjct: 77  QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDG 136
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXX 183
           L  +EA+S+  A  T Y+ ++ S    G   ++ G AGG+G + IQ AK+VFG       
Sbjct: 137 LDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVD 195
Query: 184 XXXXXLDLLRSLGADLAID 202
                L+L + +GAD+ I+
Sbjct: 196 INQDKLNLAKKIGADVIIN 214

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 49/326 (15%)
Query: 15  VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEK 74
           V+K+E +  VPS+ E+++LIK     +N I+     G +       P + G + +G V  
Sbjct: 22  VIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYVLGREASGTVVA 77
Query: 75  VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK-PK-----NLSFVE 128
            G  V  F+VGD+V              N + A+Y+ +      +K PK      L    
Sbjct: 78  KGKGVTNFEVGDQV----------AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYA 127
Query: 129 AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXX 188
           A  L + T  ++   E      G  +L+   AGGVG ++ QL K + G            
Sbjct: 128 AGLLQVLTALSFTN-EAYHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVASTDEK 185
Query: 189 LDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CDKALKAVKEGGRVVS 240
           L + +  GA+  I+ +KE+I     KF      D  FD+VG+   + +L A+K  G  VS
Sbjct: 186 LKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVS 245
Query: 241 I--IGSVTPPASSFVLTSDGSILEKLNPY----------FESGKVKAIIDPK-------G 281
                 + PP S   L+     L +   Y          + S +   +++ K        
Sbjct: 246 FGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYK 305
Query: 282 PFPFSQTLEAFSHLESSRATGKVVIH 307
            +P      A + +ES +  GK+V+ 
Sbjct: 306 TYPLRDYRTAAADIESRKTVGKLVLE 331

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL----PTIPGYDVAGVVEKVGSQVKKF 82
           L E  VL++V  +++N  D     G  S  D  +    P +PG D+AGVV  V SQ  +F
Sbjct: 28  LPEGDVLVRVHYSSVNYKD-----GLASIPDGKIVKTXPFVPGIDLAGVV--VSSQHPRF 80
Query: 83  KVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETA--- 139
           + GDEV     E  + H    G  +EY  +    L   PK L+  EA ++  A  TA   
Sbjct: 81  REGDEVIATGYEIGVTH---FGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALS 137
Query: 140 YEGLERSAFSAGKS-ILVLGGAGGVGTMVIQ-LAKHVFGXXXXXXXXXXXXLDLLRSLGA 197
              LE    +  +  +LV G  GGVG++ +  LAK   G             D LR LGA
Sbjct: 138 IHRLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKR--GYTVEASTGKAAEHDYLRVLGA 195
Query: 198 DLAI---DYTKENIEDL-PEKFDVVFDAVG 223
              +   D   E I  L  +++    D VG
Sbjct: 196 KEVLAREDVXAERIRPLDKQRWAAAVDPVG 225

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 53/345 (15%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A ++K+ G    V +    V+V S    QV ++  A  +N +D     G       PL
Sbjct: 3   MAAVIHKKGGPDNFVWE---EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAG----IPHPL 55
Query: 61  -----PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN 115
                P + G++ A VVE+VG  V  F VG+ V   +       P       E     E 
Sbjct: 56  VVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCL-------PPLGAYSQERLYPAEK 108
Query: 116 LLALKPKNLSF--VEAASLPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAK 172
           L+ + PK+L    V  A L L   TA   L ++     G  +L+   AGG+G +++  A+
Sbjct: 109 LIKV-PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ-- 224
           H  G             +  R LG    I+Y+ ++  ++  +       DVV+D++G+  
Sbjct: 168 H-LGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT 226
Query: 225 CDKALKAVKEGG---------------RVVSIIGS-----VTPPASSFVLTSDGSILEKL 264
             K+L  ++  G               RVV  +G      +T PA    +++   I E  
Sbjct: 227 LQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGS 286
Query: 265 NPYFESGKVKAIIDPKG-PFPFSQTLEAFSHLESSRATGKVVIHP 308
              F++ K   +       FP  +   A  ++   +  G +V+ P
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 109/276 (39%), Gaps = 39/276 (14%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA  Y E G+   V+   T    P+    ++L+KV AA L   D   M    +     L
Sbjct: 1   MKAVQYTEIGSEPVVVDIPT----PTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL 56
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDINEKALDHPKRN--------------- 103
           P   G++  G V ++G  V  F VGD V  YG     A     R                
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 104 ------GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLER--SAFSAGKSIL 155
                 GS+AEY  V+     +   +L  V AA L  A  T Y  + R       G + +
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176
Query: 156 VLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDY---TKENIEDLP 212
           V+G  GG+G + IQ+ + V              L L R +GAD A+       + I +L 
Sbjct: 177 VIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235
Query: 213 --EKFDVVFDAVG---QCDKALKAVKEGGRVVSIIG 243
             +    VFD VG     D A + V   G  +S++G
Sbjct: 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVG 270

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ + N+E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 27  VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 84
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
           P + G +    V  VGS V   K GD V              N  L  +       E  L
Sbjct: 85  PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 133
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G
Sbjct: 134 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 192
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
                       +    D L+SLGA+  I          K   +D+P+   +  + VG  
Sbjct: 193 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 251
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
              + L+ +  GG +V+  G    P  + V
Sbjct: 252 SSTELLRQLARGGTMVTYGGMAKQPVVASV 281

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ + N+E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 14  VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE-L 71
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY---TAVEENLL 117
           P + G +    V  VGS V   K GD V              N  L  +       E  L
Sbjct: 72  PAVGGNEGVAQVVAVGSNVTGLKPGDWVI-----------PANAGLGTWRTEAVFSEEAL 120
Query: 118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
              P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G
Sbjct: 121 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALG 179
Query: 177 XXXXXXXXXXXXL----DLLRSLGADLAID-------YTKENIEDLPEKFDVVFDAVG-- 223
                       +    D L+SLGA+  I          K   +D+P+   +  + VG  
Sbjct: 180 LRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP-RLALNCVGGK 238
Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
              + L+ +  GG +V+  G    P  + V
Sbjct: 239 SSTELLRQLARGGTMVTYGGMAKQPVVASV 268

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
           KAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P P
Sbjct: 2   KAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHP-P 56
Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
            IP                   V    Y  +  +        G LAE  AV +  L   P
Sbjct: 57  FIP------------GXEVVGVVEGRRYAALVPQ--------GGLAERVAVPKGALLPLP 96
Query: 122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXX 181
           + LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G     
Sbjct: 97  EGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR-AXGLRVLA 155
Query: 182 XXXXXXXLDLLRSLGADLAIDYTKENIEDLPEK------FDVVFDAVG-QCDKALKAVKE 234
                  L L  +LGA+ A  Y      ++PE+       D+V +  G + +++L  +  
Sbjct: 156 AASRPEKLALPLALGAEEAATYA-----EVPERAKAWGGLDLVLEVRGKEVEESLGLLAH 210
Query: 235 GGRVVSI 241
           GGR+V I
Sbjct: 211 GGRLVYI 217

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
           L+ E N  +P    ++VL+++ +  +   D        +G F       P + G++ +G 
Sbjct: 19  LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKK---PMVLGHEASGT 74
Query: 72  VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
           VEKVGS VK  K GD V            +  +    L         P  +G+L  +   
Sbjct: 75  VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKH 134
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
                   P N++F E A + PL+         R   + G  +LV G AG +G + + +A
Sbjct: 135 NAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVA 191
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           K +              L   + +GADL +  +KE+ +++  K +
Sbjct: 192 KAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 42/285 (14%)
Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKR----MLGAFSAT 56
           + A +YK     Q+ L+ E    +P  +ED+VL+++    +   D        +  F   
Sbjct: 6   LSAVLYK-----QNDLRLEQR-PIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVK 59
Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVY---------------GDINEKA----L 97
           D   P + G++ +G V KVG  VK  K GD V                G  N        
Sbjct: 60  D---PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 116
Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
             P  +G+LA Y     +     P N+S  E A L PL+         R+    G ++LV
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACRRAGVQLGTTVLV 174
Query: 157 LGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGAD--LAIDYTKENIEDLPEK 214
           + GAG +G +V  LA   +G            L++ ++ GAD  L +D  KE    + E+
Sbjct: 175 I-GAGPIG-LVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIER 232
Query: 215 FDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS 259
              +  A+G             + ++I  ++T    + +L   GS
Sbjct: 233 ---IRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS 274

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINEKA----LDHPK 101
           P + G++ +G VEKVGS VK  K GD V                G  N          P 
Sbjct: 64  PXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPP 123
Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGA 160
            +G+L  +           P N++F E A + PL+         R   + G  +LV G A
Sbjct: 124 DDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVCG-A 180
Query: 161 GGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           G +G + + +AK                L   + +GADL +  +KE+ +++  K +
Sbjct: 181 GPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 31/168 (18%)
Query: 32  VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--- 88
           VLI ++ A +   D       +   +   P IPG+++AG++++VG  VKKFK+GD V   
Sbjct: 32  VLIDILYAGICHSDIHSAYSEWK--EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVG 89
Query: 89  -------------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
                                      D  +   D+    G  +    V+EN +    KN
Sbjct: 90  CFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKN 149
Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
               + A L  A  T Y  L+ S  + G  + V  G GG+G+M ++ A
Sbjct: 150 APLEKVAPLLCAGITTYSPLKFSKVTKGTKVGV-AGFGGLGSMAVKYA 196

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 24  VPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           VP     ++L++V AA++   D       A++      P + G++ +GVVE VG  V++ 
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 83  KVGDEV-------------------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN 123
           +VGD V                   +  +N + L    R+G  AEY  V      + PK+
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 124 LSFVEAASL-PL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
           L F  AA L P   A  T Y G    +  +GKS+L+  GAG +G M   + +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAG----SGVSGKSVLIT-GAGPIGLMAAMVVR 185

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM----LGAFSATDSPLPTIPGYDVAGV 71
           L+ E N  +P    ++VL+K+ +  +   D        +G F       P + G++ +G 
Sbjct: 18  LRLE-NYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKK---PMVLGHEASGT 73
Query: 72  VEKVGSQVKKFKVGDEV------------YGDINEKALD-------HPKRNGSLAEYTAV 112
           V KVGS V+  + GD V            +  I    L         P  +G+L  +   
Sbjct: 74  VVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKH 133
Query: 113 EENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLA 171
             N     P N++F E A + PL+         R+  + G  +LV  GAG +G + +  A
Sbjct: 134 NANFCYKLPDNVTFEEGALIEPLS--VGIHACRRAGVTLGNKVLVC-GAGPIGLVNLLAA 190
Query: 172 KHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFD 216
           K +              L   + +GAD  ++ + E+ E++ +K +
Sbjct: 191 KAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVE 235

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 40/262 (15%)
Query: 2   KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNP---IDFKRML-GAFS 54
           K+W  K++     +QS  + +T VE+P L+  +VL++ +  +++P   I  KR+  GA  
Sbjct: 9   KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGA-- 65
Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEE 114
                   + G  VA VVE   S+   F  G  V          H   +G   E      
Sbjct: 66  -------VMMGQQVARVVE---SKNSAFPAGSIVLA--QSGWTTHFISDGKGLE------ 107
Query: 115 NLLALKPKNLSFVEA-ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
            LL   P  L    A  ++ +   TAY GL E      G+++LV   AG VG++V Q+AK
Sbjct: 108 KLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAK 167
Query: 173 HVFGXXXXXXXXXXXXLDLLRSLGADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ-- 224
            + G            +  L+ +G D A +Y T  ++E+      P+ +D  FD VG   
Sbjct: 168 -LKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEF 226
Query: 225 CDKALKAVKEGGRVVSIIGSVT 246
            +  L  +K+ G+ ++I G+++
Sbjct: 227 LNTVLSQMKDFGK-IAICGAIS 247

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIEDLPEKF---- 215
            G VG M I  AK                ++  +  GA   ++Y   +IED   K     
Sbjct: 175 IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGK 234
Query: 216 --DVVFDAVGQCD---KALKAVKEGGRVVSI 241
             D V  A G  +   +A+K VK GG + +I
Sbjct: 235 GVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 11  NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDV 68
           N+  V      +    L +D VLIKV   A + I++K  L   +  +     P I G D 
Sbjct: 13  NADDVSVHVKTISTEDLPKDGVLIKV---AYSGINYKDGLAGKAGGNIVREYPLILGIDA 69
Query: 69  AGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE 128
           AG V  V S   +F  GDEV     E  +    R+G L+EY +V  + L   P+NLS  E
Sbjct: 70  AGTV--VSSNDPRFAEGDEVIATSYELGV---SRDGGLSEYASVPGDWLVPLPQNLSLKE 124
Query: 129 AASLPLATETAYEGLER 145
           A     A  TA   + R
Sbjct: 125 AXVYGTAGFTAALSVHR 141

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 43/318 (13%)
Query: 20  TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV--GS 77
           T+VE P    + V++ V AA +   D+    G +     P P +PG + AGVV     GS
Sbjct: 39  TDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFVPGIETAGVVRSAPEGS 97
Query: 78  QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
            +K    GD V       A +     G  AE  AV  + +   P  L   EA +L     
Sbjct: 98  GIKP---GDRVM------AFNF---IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH 145
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           T Y     R    AG+++LVLG AGG+GT  IQ+AK + G             + ++S+G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVG 204
Query: 197 ADLAIDYTKENIEDLPEK-----FDVVFDAVG--QCDKALKAVKEGGRVVSI-------- 241
           AD+ +   +   + + E       D+V D +G    D A++ +   GR++ +        
Sbjct: 205 ADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIP 264
Query: 242 ---IGSVTPPASSFVLTSDGSILEKLNPYF---ESGKVKAIIDPKGP-----FPFSQTLE 290
              +  +    +S +  + G  L     Y    ++G  K + +   P      P S+  +
Sbjct: 265 TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPVSARIPLSEGRQ 324
Query: 291 AFSHLESSRATGKVVIHP 308
           A       +  GK+V+ P
Sbjct: 325 ALQDFADGKVYGKMVLVP 342

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G   A   PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82  FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
            + GD+V                  G++  K L  P+   ++G                 
Sbjct: 83  VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
            + ++YT V+E  +A         +   +     T Y    + A     S   + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
           G  VI   K                    + +GA   +   DY K   E L E      D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
             F+ +G+ D    AL   +E   V  I+G   PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           V+VP     +VLIKV+A ++   D        ++ +    P I G++VAG V ++G  V+
Sbjct: 21  VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 80
Query: 81  KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
             +VGD V  + +          +   H  +N         G  AEY  V    +   PK
Sbjct: 81  GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 140
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
           ++   E A+L      A + +     S GKS+L+  GAG +G + I +AK          
Sbjct: 141 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 197
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
                  +L + +GAD  I+  +E++  + E  D+      D   +   A KA+++G + 
Sbjct: 198 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 255
Query: 239 VSIIGSVT 246
           V+  G V+
Sbjct: 256 VTPAGRVS 263

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRM-LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK 80
           V+VP     +VLIKV+A ++   D        ++ +    P I G++VAG V ++G  V+
Sbjct: 22  VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVE 81
Query: 81  KFKVGDEVYGDIN---------EKALDHPKRN---------GSLAEYTAVEENLLALKPK 122
             +VGD V  + +          +   H  +N         G  AEY  V    +   PK
Sbjct: 82  GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPK 141
Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXX 182
           ++   E A+L      A + +     S GKS+L+  GAG +G + I +AK          
Sbjct: 142 SIP-PEYATLQEPLGNAVDTVLAGPIS-GKSVLIT-GAGPLGLLGIAVAKASGAYPVIVS 198
Query: 183 XXXXXXLDLLRSLGADLAIDYTKENIEDLPEKFDVV----FDAVGQCDKALKAVKEGGRV 238
                  +L + +GAD  I+  +E++  + E  D+      D   +   A KA+++G + 
Sbjct: 199 EPSDFRRELAKKVGADYVINPFEEDV--VKEVXDITDGNGVDVFLEFSGAPKALEQGLQA 256
Query: 239 VSIIGSVT 246
           V+  G V+
Sbjct: 257 VTPAGRVS 264

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 53/277 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G   A   PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVA---PLPVIAGHEAAGIVESIGEGVTT 82
Query: 82  FKVGDEVY-----------------GDINEKALDHPK---RNG----------------- 104
            + GD+V                  G++  K L  P+   ++G                 
Sbjct: 83  VRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGT 142
Query: 105 -SLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGV 163
            + ++YT V+E  +A         +   +     T Y    + A     S   + G GGV
Sbjct: 143 STFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGV 202
Query: 164 GTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----FD 216
           G  VI   K                    + +GA   +   DY K   E L E      D
Sbjct: 203 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVD 262
Query: 217 VVFDAVGQCDK---ALKAVKEGGRVVSIIGSVTPPAS 250
             F+ +G+ D    AL   +E   V  I+G   PP S
Sbjct: 263 FSFEVIGRLDTMVAALSCCQEAYGVSVIVG--VPPDS 297

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 24  VPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKF 82
           +P ++ +D+V +K+ ++ L   D  R+   F       P   G++ +G ++ VGS V   
Sbjct: 19  IPEIKHQDEVRVKIASSGLCGSDLPRI---FKNGAHYYPITLGHEFSGYIDAVGSGVDDL 75
Query: 83  KVGDEV------------------YGDINEKALDHPKRNGSLAEYTAVE-ENLLALKPKN 123
             GD V                  Y    +      +R+G  AEY  V+ +N+ AL P +
Sbjct: 76  HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL-PTD 134
Query: 124 L-----SFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXX 178
           +     +F+E  ++ L      +G E       K+++++ GAG +G + IQ A  +    
Sbjct: 135 MPIEDGAFIEPITVGLHAFHLAQGCEN------KNVIII-GAGTIGLLAIQCAVALGAKS 187
Query: 179 XXXXXXXXXXLDLLRSLGA 197
                     L L +S GA
Sbjct: 188 VTAIDISSEKLALAKSFGA 206

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
           I G++  G + KVGS VK+ KVGD+V        +G+  E    +P  +G +        
Sbjct: 56  ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
                 +E   V E    LAL P+++   +A  L     T + G E +    G ++ V+ 
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
           G G VG M +  A H+               D+    GA   I+Y   +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSL-------- 106
           I G++  G + KVGS VK+ KVGD+V        +G+  E    +P  +G +        
Sbjct: 56  ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGE-EESQRGYPMHSGGMLGGWKFSN 114
Query: 107 ------AEYTAVEE--NLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
                 +E   V E    LAL P+++   +A  L     T + G E +    G ++ V+ 
Sbjct: 115 FKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVI- 173
Query: 159 GAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENI 208
           G G VG M +  A H+               D+    GA   I+Y   +I
Sbjct: 174 GIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI 223

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 91/257 (35%), Gaps = 49/257 (19%)
Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VAA +   D   + G      +PLP I G++ AG+VE VG  V  
Sbjct: 26  VEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLV---TPLPVILGHEAAGIVESVGEGVTT 82
Query: 82  FKVGDEV--------------------YGDINE-------------------KALDHPKR 102
            K GD+V                    Y   N+                   K + H   
Sbjct: 83  VKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVG 142
Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGG 162
             + ++YT V+EN +A         +   +     T Y    + A     S   + G GG
Sbjct: 143 VSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGG 202
Query: 163 VGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAI---DYTKENIEDLPEK----F 215
           VG  V+   K                    + LGA   I   DY K   E L E      
Sbjct: 203 VGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGV 262
Query: 216 DVVFDAVGQCDKALKAV 232
           D  F+ +GQ D  + ++
Sbjct: 263 DFSFEVIGQLDTMMASL 279

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G ++ VL G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVL-G 174
Query: 160 AGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLGADLAIDYTKENIE----DLPE-- 213
            G VG M +  AK                +D  +  GA   ++Y    IE    +L E  
Sbjct: 175 IGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGPIESQIMNLTEGK 234
Query: 214 KFDVVFDAVGQCD---KALKAVKEGGRVVSI 241
             D    A G  D    A+K VK GG + ++
Sbjct: 235 GVDAAIIAGGNADIMATAVKIVKPGGTIANV 265

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G            +  L+ LG
Sbjct: 127 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 185
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+  +Y T E++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 186 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 242

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 8  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 138 TAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXXLDLLRSLG 196
           TAY GL E      G++++V   AG VG++V Q+AK + G            +  L+ LG
Sbjct: 148 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAK-LKGCKVVGAVGSDEKVAYLQKLG 206
Query: 197 ADLAIDY-TKENIEDL-----PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT 246
            D+  +Y T E++E+      P+ +D  FD VG    +  +  +K+ GR ++I G+++
Sbjct: 207 FDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGR-IAICGAIS 263

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 8  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 61
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTV 89

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 1  MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA V  E G   S+      +EV   +  +V IK++A A+   D   + GA    +   
Sbjct: 7  CKAAVAWEAGKPLSI----EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCF 60
Query: 61 PTIPGYDVAGVVEKVGSQVKKFKVGDEV 88
          P I G++ AG+VE VG  V K K GD V
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTV 88

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 63  IPGYDVAGVVEKVGSQVKKFKVGDEV--------YGDINEKALDHPKRNGSLA------- 107
           I G++  G V +VGS+VK FK GD V        +  +  +A      NG LA       
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF 115
Query: 108 ------EYTAVEEN--LLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
                 EY  V +    LA+ PK++    A  +     T + G E +    G S++V+ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVI-G 174
Query: 160 AGGVGTMVIQLAK 172
            G VG M I  AK
Sbjct: 175 IGAVGLMGIAGAK 187

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	310
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-122
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-111
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-109
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-107
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-106
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-103
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-84
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-83
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-75
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-75
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-74
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-72
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-72
3gms_A	340	Putative NADPH:quinone reductase; structural genom	6e-71
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-70
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-70
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	4e-67
4eye_A	342	Probable oxidoreductase; structural genomics, niai	4e-67
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-65
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-62
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-61
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-59
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-59
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	7e-56
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	5e-55
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-53
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-49
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-46
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	6e-46
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	4e-45
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-44
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-40
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	8e-40
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-39
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-38
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	9e-38
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-37
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-36
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	8e-36
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	6e-35
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	2e-34
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-33
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	3e-30
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	5e-30
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-29
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-25
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-22
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-21
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	7e-21
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-20
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	7e-20
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-18
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	9e-17
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-16
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-16
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-16
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	7e-16
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	4e-15
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-14
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	2e-14
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	3e-14
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-14
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	5e-14
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	3e-13
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	2e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	6e-05
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	6e-05
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-05
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	1e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-04

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  351 bits (904), Expect = e-122
 Identities = 101/323 (31%), Positives = 150/323 (46%), Gaps = 28/323 (8%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF---SATD 57
           MKA  + ++G    VLK       P  R++Q+LIKV AA+LNPID+K   G+        
Sbjct: 7   MKAIQFDQFGPP-KVLKLVD-TPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLK 64

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLL 117
           + LP+  GYD +G V ++GS V    +GD+V G         P      AEY     + +
Sbjct: 65  NNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIA-----GFPDHPCCYAEYVCASPDTI 119

Query: 118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             K + LSF++AASLP A  TA + L ++    G  +L+  GAGGVG + IQLAK   G 
Sbjct: 120 IQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQ-KGT 178

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIED-LPEKFDVVFDAVGQ--CDKALKAVKE 234
             V  T+S      L++LGA+  I+Y +E+    +    D V D VG     +++  +KE
Sbjct: 179 -TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKE 237

Query: 235 GGRVVSIIGSVTPP-----------ASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPF 283
            G +VS+                  A   +   +   L  L       K++  I     F
Sbjct: 238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEIS--RIF 295

Query: 284 PFSQTLEAFSHLESSRATGKVVI 306
             S+ + A   LE+    GK+V 
Sbjct: 296 QLSEAVTAHELLETGHVRGKLVF 318

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  323 bits (831), Expect = e-111
 Identities = 73/330 (22%), Positives = 130/330 (39%), Gaps = 42/330 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+      Y      +    +V++P+L  D +L++  A  +NP+D+K +       +   
Sbjct: 2   MEQHQVWAYQTKTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANP--INWSN 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             +PG D AGV+ KVG++V    +G  V    +       KR+GS AE+T +  + +   
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTS------LKRHGSFAEFTVLNTDRVMTL 112

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P NLSF  AA+LP    TA++  E+   +  + +L+  G G V  ++ Q+  +  G   V
Sbjct: 113 PDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLI-VGFGAVNNLLTQMLNN-AGY-VV 169

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC--DKALKAVKEGGRV 238
              S++    L    G              + +K+  +FDAV        + ++K  G +
Sbjct: 170 DLVSASLSQALAAKRGVRHLYREP----SQVTQKYFAIFDAVNSQNAAALVPSLKANGHI 225

Query: 239 VSIIGSVTPPASSFVLTS----------------------DGSILEKLNPYFESGKVKAI 276
           + I   +  P       +                           E L      GK++  
Sbjct: 226 ICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIA 285

Query: 277 IDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                 F F Q +EA  H E ++    + +
Sbjct: 286 AP--DIFRFEQMIEALDHSEQTKLKTVLTL 313

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  319 bits (821), Expect = e-109
 Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 49/344 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFE-TNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           +KA  +++         F+  N+++P  +  ++L+K+ + ++NP+D K+ L   S     
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVS----K 58

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
            P + G+D  GVVE VG++V  F  GD VY   +      P +NGS AEY  + E L+A 
Sbjct: 59  APRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS------PDQNGSNAEYQLINERLVAK 112

Query: 120 KPKNLSFVEAASLPLATETAYEGL-------ERSAFSAGKSILVLGGAGGVGTMVIQLAK 172
            PKN+S  +A SLPL   TAYE L            + GK++L++ GAGGVG++  Q+AK
Sbjct: 113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAK 172

Query: 173 HVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDVVFDAVG---QC 225
             +G   +   S    ++  + +GAD+ +++ +  +        E  D VF         
Sbjct: 173 A-YGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYY 231

Query: 226 DKALKAVKEGGRVVSIIGSVTPPASS------------FVLT----------SDGSILEK 263
           D  ++ VK  G + +I+        +            F+                 LE 
Sbjct: 232 DDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLED 291

Query: 264 LNPYFESGKVKAIIDP-KGPFPFSQTLEAFSHLESSRATGKVVI 306
           +    E    +                +A   LES+   GK+VI
Sbjct: 292 ITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVI 335

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  315 bits (808), Expect = e-107
 Identities = 107/362 (29%), Positives = 164/362 (45%), Gaps = 67/362 (18%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSA---- 55
             AWV  +YG +  VL+F  N+ +P +   ++V++KV AA++NPID     G  +     
Sbjct: 22  SMAWVIDKYGKN-EVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNM 80

Query: 56  ---------TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSL 106
                         P   G DV+GVV + G  VK FK GDEV+  +       P + G+L
Sbjct: 81  KRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTL 134

Query: 107 AEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA-----FSAGKSILVLGGAG 161
           +E+  V  N ++ KPK+L+  +AASLP    TA+  + +          GK +L+LG +G
Sbjct: 135 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASG 194

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL---PEKFDVV 218
           GVGT  IQ+ K  + A  V A  S    +L+R LGAD  IDY   ++E+     + FD +
Sbjct: 195 GVGTFAIQVMKA-WDA-HVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 252

Query: 219 FDAVGQ--CDKALKAVKE--GGRVVSIIGSVTPP-------------------------- 248
            D VG      A   +K+  G   V+++                                
Sbjct: 253 LDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 312

Query: 249 ----ASSFVLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKV 304
                      + G  L+ +    ++GK++ +I+    FPFS+  EAF  +E   A GK 
Sbjct: 313 KGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQT--FPFSKVPEAFLKVERGHARGKT 370

Query: 305 VI 306
           VI
Sbjct: 371 VI 372

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  313 bits (803), Expect = e-106
 Identities = 86/342 (25%), Positives = 145/342 (42%), Gaps = 44/342 (12%)

Query: 1   MKAWVYKEYGNSQSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           MKA  Y +           +  +  P+     +L++V A ++NP+D+K         D  
Sbjct: 23  MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP--PDGT 80

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
              + GYD AG+V  VG  V  F+ GDEV+   +        R G+ AE+  V+E ++  
Sbjct: 81  DWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGS------IIRPGTNAEFHLVDERIVGR 134

Query: 120 KPKNLSFVEAASLPLATETAYEGL------ERSAFSAGKSILVLGGAGGVGTMVIQLAKH 173
           KPK L + EAA+LPL + TA+E         +    A  +IL++GGAGGVG++ +Q+A+ 
Sbjct: 135 KPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQ 194

Query: 174 VFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDVVFDAVG---QCD 226
               + +A  S     + ++SLGA   ID++K    ++          VF          
Sbjct: 195 RTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAA 254

Query: 227 KALKAVKEGGRVVSIIGSVTPPASS-----------FVLT----------SDGSILEKLN 265
           +    +   GR   I                      + T            G +L  ++
Sbjct: 255 EIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVS 314

Query: 266 PYFESGKVKAIIDPK-GPFPFSQTLEAFSHLESSRATGKVVI 306
              + G+++  +  +  P   +   +A + +ES  A GKVVI
Sbjct: 315 RLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  304 bits (780), Expect = e-103
 Identities = 104/337 (30%), Positives = 160/337 (47%), Gaps = 42/337 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A V +E      VL+    +  P     QVL+++ A+  NP+D K   G       PL
Sbjct: 8   MIAAVVEEAN-GPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL 63

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P I G D+AG V  VG +V  F+VGD V+G             G+ A++ AV+  LLA K
Sbjct: 64  PAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTG----GVGGLQGTHAQFAAVDARLLASK 119

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  L+  +A+ LPL   TA+EGL +R+    G+++L+ GG GGVG + IQ+A    GA +
Sbjct: 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALA-RGA-R 177

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKE----NIEDLPEKFDVVFDAVGQ--CDKALKAVK 233
           V AT+  + L+ +R LGA       +           + FD+V+D +G    D +  AVK
Sbjct: 178 VFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVK 237

Query: 234 EGGRVVSIIGSVTPPAS-----------SFVLTS---------DGSILEKLNPYFESGKV 273
             G VVS +G  T   +            F L +          G +L + +   ++GK+
Sbjct: 238 RFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKL 297

Query: 274 KAIIDPKGPFPFSQTLEAFSHL----ESSRATGKVVI 306
              +DP+  F  ++   A+  +    +  R  GK+ I
Sbjct: 298 APRLDPR-TFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  258 bits (661), Expect = 1e-84
 Identities = 80/361 (22%), Positives = 120/361 (33%), Gaps = 69/361 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A    ++               P L  DQV ++V A A+NP D               
Sbjct: 12  QTALTVNDHDEVTVW----NAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA-----TP 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
               G D AG V  VGS V   +VGD VYG  NE     P   G+ ++YT     + A  
Sbjct: 63  WAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTP-DQGAFSQYTVTRGRVWAKI 121

Query: 121 PKNLSFVEAASLPLATETAYEGL-------------ERSAFSAGKSILVLGGAGGVGTMV 167
           PK LSF +AA+LP    TA   +             +    S    +LV GG+    T+ 
Sbjct: 122 PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVT 181

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAV 222
           +Q+ +   G     AT S    DL +S GA+   DY   N+                D +
Sbjct: 182 MQMLRL-SGY-IPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI 239

Query: 223 G------QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS----------------- 259
                   C  A+   + GG  VS+       A+  ++T+D +                 
Sbjct: 240 TNVESTTFCFAAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYG 297

Query: 260 -------------ILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATG-KVV 305
                        +        E G++           F    +    +     +G K+V
Sbjct: 298 RPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV 357

Query: 306 I 306
           +
Sbjct: 358 V 358

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  253 bits (649), Expect = 3e-83
 Identities = 104/348 (29%), Positives = 155/348 (44%), Gaps = 50/348 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V +  G  + VL+    + VP     +V +++ AAALN +D     G  S    PL
Sbjct: 1   MRAVVMRARGGPE-VLEVAD-LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKL-PL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK------------------R 102
           P + G D +GVV+ VG  V+ F  GDEV  +         +                  R
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAG 161
           +G+ AEY  + E  LA KPKNLSF EAA++PL   TA++ + ++     G  +LV+    
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS 177

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDL------PEK 214
           GV    IQ+AK  FGA +V AT+ +  KL   ++LGAD  ++YT  +           + 
Sbjct: 178 GVSVAAIQIAKL-FGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKG 235

Query: 215 FDVVFDAVGQC--DKALKAVKEGGRVVSIIGSVTPPASSFVLTS--------DGSIL--- 261
            D V D  G    +  +KA   GGR+  I G+ +    +              GS +   
Sbjct: 236 ADKVVDHTGALYFEGVIKATANGGRIA-IAGASSGYEGTLPFAHVFYRQLSILGSTMASK 294

Query: 262 ---EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                +  + E GK+K ++      P     E    LE  R  GKVV+
Sbjct: 295 SRLFPILRFVEEGKLKPVVGQV--LPLEAAAEGHRLLEERRVFGKVVL 340

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  237 bits (606), Expect = 2e-75
 Identities = 81/382 (21%), Positives = 138/382 (36%), Gaps = 81/382 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
           M A +     + +  +  +  V VP L   + L+ V+A+++N       +    +T    
Sbjct: 43  MFAGLETRDKDPRKSIHLDD-VPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFL 101

Query: 59  -------------PLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYG-------------- 90
                         LP  + G D+AGVV + G  V  ++ GDEV                
Sbjct: 102 ERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHN 161

Query: 91  ----DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL--- 143
               D  ++        G LAE   V+ N L  KP +LS+ EAA+  L   TAY  L   
Sbjct: 162 DTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSR 221

Query: 144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY 203
             +    G ++L+ G +GG+G+   Q A    GA+ +   SS  K ++ R++GA+  ID 
Sbjct: 222 NGAGMKQGDNVLIWGASGGLGSYATQFALA-GGANPICVVSSPQKAEICRAMGAEAIIDR 280

Query: 204 TKENIEDLP-----------------------EKFDVVFDAVGQC--DKALKAVKEGGRV 238
             E                             E  D+VF+  G+     ++   ++GG +
Sbjct: 281 NAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTI 340

Query: 239 VSIIGSVTPPASSFVLTS--------DGSI------LEKLNPYFESGKVKAIIDPKGPFP 284
                S +     +             GS         + N     G++   +     + 
Sbjct: 341 T-TCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLS--KVYS 397

Query: 285 FSQTLEAFSHLESSRATGKVVI 306
              T +A   +  +   GKV +
Sbjct: 398 LEDTGQAAYDVHRNLHQGKVGV 419

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  233 bits (597), Expect = 3e-75
 Identities = 96/344 (27%), Positives = 145/344 (42%), Gaps = 48/344 (13%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+ W  +        LK      VP   E  ++++ +A +LN  D   +       D   
Sbjct: 28  MQEWSTETVAPH--DLKLAE-RPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAF 83

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK---------------RNGS 105
           P +P  D++GVVE VG  V +F+ GD V        LD  +                 G 
Sbjct: 84  PFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV 143

Query: 106 LAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVG 164
           L+EY  + E      PK+L   EA++LP A  TA+  L E+    AG  ++V  G GGV 
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-GTGGVA 202

Query: 165 TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVV 218
              +Q+AK   GA  +  +SS  KLD   +LGAD  I+  +E+  +           D +
Sbjct: 203 LFGLQIAKA-TGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261

Query: 219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTPPASSFVLTS--------DGSI------LE 262
            +  G     ++LKAV   GR+  +IG +     S  +           G        LE
Sbjct: 262 LEIAGGAGLGQSLKAVAPDGRIS-VIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALE 320

Query: 263 KLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            L    +   +K +ID    + F++  EA +HL+     GKVVI
Sbjct: 321 DLVGAVDRLGLKPVID--MRYKFTEVPEALAHLD-RGPFGKVVI 361

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  231 bits (591), Expect = 2e-74
 Identities = 89/337 (26%), Positives = 147/337 (43%), Gaps = 48/337 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G    VLK  +++ VP  ++ QVLIKV A  +NP++     G +S     L
Sbjct: 30  MRAVRVFEFGGP-EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLL 87

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+      +       G  AEY    ++ +   
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFT-----SSTIS---GGYAEYALAADHTVYKL 139

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P+ L F + A++ +   TAY  L   +   AG+S+LV G +GGVG    Q+A+  +G  K
Sbjct: 140 PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARA-YGL-K 197

Query: 180 VAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDK 227
           +  T  +     ++   GA    ++ +    +  +K          D++ + +      K
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVNLSK 254

Query: 228 ALKAVKEGGRVVSI-IGSVTPPASSFVLTSDGSIL----------------EKLNPYFES 270
            L  +  GGRV+ +             +  + SI+                  L    E 
Sbjct: 255 DLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEI 314

Query: 271 GKVKAIIDPKGPFPFSQTLEAFSH-LESSRATGKVVI 306
           G +K +I  +  +P  +  EA  + +  S ATGK+++
Sbjct: 315 GWLKPVIGSQ--YPLEKVAEAHENIIHGSGATGKMIL 349

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  230 bits (587), Expect = 1e-72
 Identities = 91/392 (23%), Positives = 144/392 (36%), Gaps = 91/392 (23%)

Query: 1   MKAWVYKEYGNSQ----------SVLKFETNVEVPSLREDQVLIKVVAAALNPID----- 45
             A   +                  L+    V +P L  D+VL+ V+A+++N        
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGE-VPMPELAPDEVLVAVMASSINYNTVWSAM 83

Query: 46  -----------FKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG---- 90
                           G ++        + G D +GVV + G  V+++K GD V      
Sbjct: 84  FEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH 143

Query: 91  --------------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT 136
                            ++A       G LAEY  V  + L  KP +L++ EAA  PL  
Sbjct: 144 VDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 137 ETAYEGL---ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193
            TAY  L     +    G  +L+ G +GG+G+  IQ  K+  G   VA  SS  K   +R
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKN-GGGIPVAVVSSAQKEAAVR 262

Query: 194 SLGADLAIDYTKENIED-----------------------LPEKFDVVFDAVGQ--CDKA 228
           +LG DL I+  +  I D                          + D+VF+  G+     +
Sbjct: 263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLS 322

Query: 229 LKAVKEGGRVVSIIGSVTPPASSFVLTS--------------DGSILEKLNPYFESGKVK 274
           +   + GG VV   GS +    +F                  +    +  N  FESG V 
Sbjct: 323 VIVARRGGTVV-TCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVV 381

Query: 275 AIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
             +     +P ++  EA   +++SR  GKV +
Sbjct: 382 PAMS--AVYPLAEAAEACRVVQTSRQVGKVAV 411

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  226 bits (579), Expect = 2e-72
 Identities = 70/342 (20%), Positives = 123/342 (35%), Gaps = 49/342 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A VY  +G+   V++ +  +E+ ++R   V +K++AA +NP D   + G +      L
Sbjct: 27  VRALVYGHHGDPAKVVELKN-LELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLL-PEL 84

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P + G +    V  VGS V   K GD V               G+        E  L   
Sbjct: 85  PAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA--------NAGLGTWRTEAVFSEEALIQV 136

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++    AA+L +   TAY  L +      G S++      GVG  VIQ+A    G   
Sbjct: 137 PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRT 195

Query: 180 VAATSSTAKL----DLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG--QCDK 227
           +        +    D L+SLGA+  I   +    ++   F       +  + VG     +
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE 255

Query: 228 ALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI--------------------LEKL 264
            L+ +  GG +V+           + S ++  D  +                    +  L
Sbjct: 256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTL 315

Query: 265 NPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                 G++ A    +   P      A         + K ++
Sbjct: 316 CDLIRRGQLTAPACSQ--VPLQDYQSALEASMKPFISSKQIL 355

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  222 bits (567), Expect = 6e-71
 Identities = 68/344 (19%), Positives = 132/344 (38%), Gaps = 53/344 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K   + ++GN + VL+ E    +  L++++V ++++   +NP D   + GA+ A   PL
Sbjct: 5   GKLIQFHKFGNPKDVLQVEY-KNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-AHRIPL 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPGY+  G+VE VG+ V +  +G  V        L      G+  EY     + +   
Sbjct: 63  PNIPGYEGVGIVENVGAFVSRELIGKRVL------PLRGE---GTWQEYVKTSADFVVPI 113

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++    AA + +   TA+    E         +LV      +G +  QL++       
Sbjct: 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQI-LNFRL 172

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQ--CDKA 228
           +A T +    + L  LGA   ID +      L E           D   D++G    ++ 
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTST---APLYETVMELTNGIGADAAIDSIGGPDGNEL 229

Query: 229 LKAVKEGGRVVSI--IGSVTPPASSFVLTSDGSI--------------------LEKLNP 266
             +++  G  ++I  +  +    +  V  +                           L  
Sbjct: 230 AFSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIR 289

Query: 267 YFESGKVKAI-IDPKGPFPFSQTLEAFSHLESSRAT-GKVVIHP 308
             E+ +++ + +     +  +    A   ++S+  T GKV +  
Sbjct: 290 LVENEQLRFMKVHST--YELADVKAAVDVVQSAEKTKGKVFLTS 331

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  221 bits (565), Expect = 2e-70
 Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 49/339 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+    K +G    V+       +P   E +VL++  A  +N  D  +  G++       
Sbjct: 29  MRFVDLKSFGGP-DVMVIGK-RPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-PKDA 85

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
             I G +++G +  VG  V  + VGD+V G  N          G+ AEY  +    +   
Sbjct: 86  SPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN---------GGAYAEYCLLPAGQILPF 136

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           PK    V+AA+LP    T +  L + +  + G+S+L+ GG  G+GT  IQLA+  FGA +
Sbjct: 137 PKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARA-FGA-E 194

Query: 180 VAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKA 231
           V AT  ST K +    LGA   I+Y  E+   +      +  D++ D +G    ++ + +
Sbjct: 195 VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIAS 254

Query: 232 VKEGGRVVSI--IGSVTPPASSFV------LTSDGSIL----------------EKLNPY 267
           + + G +  I  +G       +        LT  GS +                 ++ P 
Sbjct: 255 LAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL 314

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            E+G V  +I     F F    +A   LE     GKV++
Sbjct: 315 LEAGTVAPVIHKV--FAFEDVADAHRLLEEGSHVGKVML 351

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  220 bits (563), Expect = 3e-70
 Identities = 81/355 (22%), Positives = 134/355 (37%), Gaps = 63/355 (17%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A V   +G   + L+      +P  ++ ++ I+V A  LN ID     G         
Sbjct: 4   MRAVVLAGFGGL-NKLRLFR-KAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNP-PKT 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG++ +G+VE +G  VK +++GD V   +N           + AE        +   
Sbjct: 61  PLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN---------YNAWAEVVCTPVEFVYKI 111

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P ++SF EAA+ P+   TAY  L E +    G S+LV    GGVG  V QL         
Sbjct: 112 PDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCST-VPNVT 170

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTK---ENIEDL-PEKFDVVFDAVGQ--CDKALKAVK 233
           V  T+ST K + ++     L  D      + ++ +  E  D+V D +      K L  +K
Sbjct: 171 VFGTASTFKHEAIKDSVTHL-FDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK 229

Query: 234 EGGRVVSI--IGSVTPPASSFVLTSDG--------------------------------- 258
             G  +       VT    SF   +                                   
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289

Query: 259 -----SILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                 ++EKL   +   K+K ++D    +   +  EA   +      GK+++  
Sbjct: 290 AGLIRGVVEKLIGLYNQKKIKPVVDSL--WALEEVKEAMQRIHDRGNIGKLILDV 342

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  212 bits (543), Expect = 4e-67
 Identities = 66/354 (18%), Positives = 113/354 (31%), Gaps = 61/354 (17%)

Query: 1   MKAWVYKEYG-----------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRM 49
           MKA +    G             +  L+    + VP+    QVLIKV  A++NP D   +
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGR-IAVPAPGPSQVLIKVNLASINPSDVAFI 69

Query: 50  LGAFSATDSPLPTIPGYDVAGVVEKVGSQVK-KFKVGDEVYGDINEKALDHPKRNGSLAE 108
            G +           G++  G +   G +   K  VG  V        L +    GS AE
Sbjct: 70  KGQYGQP-RVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRV---AFATGLSNW---GSWAE 122

Query: 109 YTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVI 168
           Y   E          +   + A++ +   TA    +       K+ ++  GA  +  ++I
Sbjct: 123 YAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLII 182

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVF 219
            LAK   G   +       ++ LL+ +GA   ++       D               +  
Sbjct: 183 GLAKE-EGFRPIVTVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFL 238

Query: 220 DAVG--QCDKALKAVKEGGRVVSI------IGSVTPPASSFV--LTSDGSIL-------- 261
           DAV          A+ +  R +           +  P          +G  L        
Sbjct: 239 DAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFK 298

Query: 262 -------EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                   +    F  G+    +      P ++   A+   E ++  GKV I P
Sbjct: 299 ERRGPAILEAQKRFSDGRWSTDVT--AVVPLAEA-IAWVPAELTKPNGKVFIRP 349

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  212 bits (542), Expect = 4e-67
 Identities = 82/342 (23%), Positives = 132/342 (38%), Gaps = 55/342 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA   +        L +   VE P    + V++ V AA +   D+    G +       
Sbjct: 22  MKAIQAQSLSGP-EGLVYTD-VETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLK-MEP 78

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P +PG + AGVV     +    K GD V               G  AE  AV  + +   
Sbjct: 79  PFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF---------IGGYAERVAVAPSNILPT 128

Query: 121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           P  L   EA +L     T Y     R    AG+++LVLG AGG+GT  IQ+AK   GA  
Sbjct: 129 PPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-MGAKV 187

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVGQC--DKA 228
           +A  + TA  + ++S+GAD+ +       E   +           D+V D +G    D A
Sbjct: 188 IAVVNRTAATEFVKSVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGPAFDDA 243

Query: 229 LKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI-------------------LEKLNP 266
           ++ +   GR++ +    G +     + +L  + S+                      L  
Sbjct: 244 VRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEK 303

Query: 267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
               G ++  +  +   P S+  +A       +  GK+V+ P
Sbjct: 304 LVAEG-MRPPVSAR--IPLSEGRQALQDFADGKVYGKMVLVP 342

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  207 bits (530), Expect = 3e-65
 Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 54/344 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M A  + + G  +  L  +  V  PS  E +VL+KV A+ALN  D  +  G +       
Sbjct: 23  MLAVHFDKPGGPE-NLYVKE-VAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP-PPGA 79

Query: 61  PTIPGYDVAGVVEKVGSQVK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
             I G + +G V ++G   +  +K+GD     +           G  A+Y  V E LL  
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMP 130

Query: 120 KPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
            P+ L+  +AA++P A  TA++ L       AG  +L+  G  GVGT  IQL +   GA 
Sbjct: 131 IPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRM-AGA- 188

Query: 179 KVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVGQ--CDKAL 229
               T+ +  KL +   LGA    +Y KE+  +   KF      +++ D +G    +K +
Sbjct: 189 IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNV 248

Query: 230 KAVKEGGRVVSI--IGSVTPPASSFV------LTSDGSIL----------------EKLN 265
             +   GR V    +G        F        +   S+L                E++ 
Sbjct: 249 NCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQIL 308

Query: 266 PYFES---GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           P+F +    ++  ++D    +P ++  EA  ++E+++  GK+V+
Sbjct: 309 PHFSTEGPQRLLPVLDRI--YPVTEIQEAHKYMEANKNIGKIVL 350

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  199 bits (508), Expect = 8e-62
 Identities = 82/349 (23%), Positives = 127/349 (36%), Gaps = 57/349 (16%)

Query: 1   MKAWVYKEYG-NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
           M+  V      N +  +    +  VP   +  +L++     +N  D     G +  +   
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPS-VK 82

Query: 60  LPTIPGYDVAGVVEKVG-SQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            P   G++  G V  +G S   ++ VG  V               GS AEYT V  ++  
Sbjct: 83  PPFDIGFEGIGEVVALGLSASARYTVGQAVAYM----------APGSFAEYTVVPASIAT 132

Query: 119 LKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA 177
             P      E  +L ++  TAY  L E    S GK +LV   AGG G   +QL+K     
Sbjct: 133 PVPSVKP--EYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKK-AKC 189

Query: 178 SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVG--QCDKALK 230
             +   SS  K   L+SLG D  I+Y  E +  +     PE  DVV+++VG    D A+ 
Sbjct: 190 HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVD 249

Query: 231 AVKEGGRVVSI--IGSVTPPASSFV--------------LTSDGSIL-----------EK 263
           A+   GR++ I  I     P                    +  G  L             
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSH 309

Query: 264 LNPYFESGKVKAIIDPKGP------FPFSQTLEAFSHLESSRATGKVVI 306
           L     SG +   +D                  A +++   + TGK+V+
Sbjct: 310 LLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  197 bits (504), Expect = 3e-61
 Identities = 59/371 (15%), Positives = 119/371 (32%), Gaps = 77/371 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETN-VEVPSLREDQVLIKVVAAALNPID---------FKRML 50
            +A +Y ++G  + VL  ++  ++  +L  ++V++K + + +NP D          K   
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYT 110
                T  P     G +    V KVGS V   + GD V               G+   + 
Sbjct: 64  TTGFGTTEP-AAPCGNEGLFEVIKVGSNVSSLEAGDWVIPS--------HVNFGTWRTHA 114

Query: 111 AVEENLL-----------ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG 158
              ++               KP  L+  + A++ +   TAY  L      + GK   +  
Sbjct: 115 LGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQN 174

Query: 159 GA-GGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGADLAIDYTKENIEDLPE 213
           G    VG    Q+ K     + ++           +  L+ LGA   I   + N  +   
Sbjct: 175 GGTSAVGKYASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 233

Query: 214 KF-----------DVVFDAVG--QCDKALKAVKEGGRVVSI---IGSVTPPASSFVLTSD 257
                         +  + VG        + +   G +++            +S  +  +
Sbjct: 234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN 293

Query: 258 GSI-------------------LEKLNPYFESGKVKAIIDPKGPFPFSQT---LEAFSHL 295
            +                    L ++  ++E GK+      +    +  T    E +   
Sbjct: 294 FTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIE--TLYDGTKPLHELYQDG 351

Query: 296 ESSRATGKVVI 306
            ++   GK +I
Sbjct: 352 VANSKDGKQLI 362

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  191 bits (488), Expect = 2e-59
 Identities = 94/329 (28%), Positives = 142/329 (43%), Gaps = 52/329 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+       
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHP 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG +V GVV            G      +           G LAE  AV +  L   
Sbjct: 56  PFIPGMEVVGVV-----------EGRRYAALVP---------QGGLAERVAVPKGALLPL 95

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV 180
           P+ LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+   G   +
Sbjct: 96  PEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARA-MGLRVL 154

Query: 181 AATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK-FDVVFDAVG-QCDKALKAVKEGGRV 238
           AA S   KL L  +LGA+ A  Y +           D+V +  G + +++L  +  GGR+
Sbjct: 155 AAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRL 214

Query: 239 VSI---IGSVTPPASSFVLTSDGSI------------------LEKLNPYFESGKVKAII 277
           V I    G V P     ++  + ++                  L  L P     +++ ++
Sbjct: 215 VYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG-RELRPVV 273

Query: 278 DPKGPFPFSQTLEAFSHLESSRATGKVVI 306
            P   FPF++   AF  L     TGKVV+
Sbjct: 274 GPV--FPFAEAEAAFRALLDRGHTGKVVV 300

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  192 bits (490), Expect = 3e-59
 Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 51/353 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS-- 58
           M+A    E G   S+      + VP  +  QVLIKV AA +   D     G F       
Sbjct: 1   MRAVRLVEIGKPLSL----QEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVE 56

Query: 59  ----PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK 101
                LP   G+++AG +E+VG +V  +  GD V                  E   D P+
Sbjct: 57  DLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 102 -----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
                 +G+ AEY  V       K + L+ VEAA L  +  T Y  + +++    K++LV
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLV 176

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK- 214
           +G  GG+GTM +Q+AK V GA+ +        ++  +  GAD  I+ + ++   ++    
Sbjct: 177 VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRIT 236

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSI- 260
                D V D            KA+ + G+ V + +        + ++T       GS+ 
Sbjct: 237 ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLV 296

Query: 261 -----LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                   +    E+GKVK +I         +  EA  +LE+ +A G+ V+ P
Sbjct: 297 GNQSDFLGIMRLAEAGKVKPMITKT--MKLEEANEAIDNLENFKAIGRQVLIP 347

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  184 bits (470), Expect = 1e-56
 Identities = 75/344 (21%), Positives = 136/344 (39%), Gaps = 50/344 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID-FKRMLGAFSATDSP 59
           + A V  + G       +E  V+V S    QV ++  A  +N +D + R           
Sbjct: 2   VMAAVIHKKGGP-DNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGE 59

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLA 118
            P + G++ A VVE+VG  V  F VG+ V                G+ ++        L 
Sbjct: 60  PPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPP---------LGAYSQERLYPAEKLI 110

Query: 119 LKPKNLSFVEA--ASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVF 175
             PK+L   +   A L L   TA   L ++     G  +L+   AGG+G +++  A+H+ 
Sbjct: 111 KVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHL- 169

Query: 176 GASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDK 227
           GA+ +   S+  K +  R LG    I+Y+ ++  ++       +  DVV+D++G+    K
Sbjct: 170 GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQK 229

Query: 228 ALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGSI--------------------LEKL 264
           +L  ++  G   +     G   P      L   GS+                     + L
Sbjct: 230 SLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCL 289

Query: 265 NPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
               ++G + + +     FP  +   A  ++   +  G +V+ P
Sbjct: 290 FDAVKAGVLHSSVAKT--FPLREAAAAHKYMGGRQTIGSIVLLP 331

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  182 bits (465), Expect = 7e-56
 Identities = 80/341 (23%), Positives = 135/341 (39%), Gaps = 48/341 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
                + ++G    VL+           E+++ ++  A  +N ID     G +      L
Sbjct: 2   ATRIEFHKHGGP-EVLQAVE-FTPADPAENEIQVENKAIGINFIDTYIRSGLYPP--PSL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           P+  G + AG+V KVGS VK  K GD V Y              G+ +    +  +  A+
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSA---------LGAYSSVHNIIADKAAI 108

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
            P  +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK + GA 
Sbjct: 109 LPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAK 167

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK 230
            +    +  K       GA   I+Y +E++ +        +K  VV+D+VG+   +++L 
Sbjct: 168 LIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLD 227

Query: 231 AVKEGGRVVSI---IGSVTPPASSFVLTSDGSI--------------------LEKLNPY 267
            ++  G +VS     G+V    +  +L   GS+                      +L   
Sbjct: 228 CLQRRGLMVSFGNSSGAV-TGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSL 286

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             SG +K  +  +  +P      A   LES    G  ++ P
Sbjct: 287 IASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  180 bits (460), Expect = 5e-55
 Identities = 95/341 (27%), Positives = 142/341 (41%), Gaps = 50/341 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K   +   G    VL++  + E  +     V+++  A  LN ID     G + A    L
Sbjct: 2   AKRIQFSTVGGP-EVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
           P+  G + AGVVE VG +V +FKVGD V YG             G+ +E   + E  L  
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGP---------LGAYSEVHVLPEANLVK 108

Query: 120 KPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGAS 178
              ++SF +AA+L L   T    L ++     G+ IL    AGGVG++  Q AK + GA 
Sbjct: 109 LADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAK 167

Query: 179 KVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK 230
            +   SS  K    ++LGA   IDY+ E++          +K  VV+D VGQ     +L 
Sbjct: 168 LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLD 227

Query: 231 AVKEGGRVVSI---IGSVTPPASSFVLTSDGSI--------------------LEKLNPY 267
           +V   G VVS     G V    +  +L    S+                     ++L   
Sbjct: 228 SVAPRGLVVSFGNASGPV-SGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDM 286

Query: 268 FESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
             SGK+K        +      +A   L + R TG  ++ P
Sbjct: 287 LASGKLKVDGI--EQYALKDAAKAQIELSARRTTGSTILIP 325

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  177 bits (452), Expect = 1e-53
 Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 55/345 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K  +  E G    V+K+E    VPS+ E+++LIK     +N I+     G +       
Sbjct: 9   QKVILIDEIGGY-DVIKYED-YPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC---EK 63

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-YGDINEKALDHPKRNGSLAEYTAV-EENLLA 118
           P + G + +G V   G  V  F+VGD+V Y             N + A+Y+ +  +  + 
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVAYIS-----------NSTFAQYSKISSQGPVM 112

Query: 119 LKPKNLSFVE---AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHV 174
             PK  S  E    A+  L   TA      +     G  +L+   AGGVG ++ QL K  
Sbjct: 113 KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMK 172

Query: 175 FGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CD 226
            GA  +A  S+  KL + +  GA+  I+ +KE+I          +  D  FD+VG+   +
Sbjct: 173 -GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFE 231

Query: 227 KALKAVKEGGRVVSI---IGSVTP-------PASSFVL-------TSDGSILE----KLN 265
            +L A+K  G  VS     G + P       P +  ++        +D    +    +  
Sbjct: 232 ISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFF 291

Query: 266 PYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP 310
               S K+   I     +P      A + +ES +  GK+V+  IP
Sbjct: 292 GLVNSKKLNIKIYKT--YPLRDYRTAAADIESRKTVGKLVLE-IP 333

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  167 bits (424), Expect = 2e-49
 Identities = 84/359 (23%), Positives = 137/359 (38%), Gaps = 71/359 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---DFKRMLGAFSATD 57
           MKA   +  GN    +    NV +P    D +L+KV A     I   D   + G F +T 
Sbjct: 24  MKAVRLESVGN----ISVR-NVGIPEPGPDDLLVKVEACG---ICGTDRHLLHGEFPST- 74

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDI-------------------NEKALD 98
              P   G++  G+V + GS V+    G  + GD                    N +A+ 
Sbjct: 75  --PPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG 132

Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVL 157
              R+G  AEY  V        P  L  V  A   PLA      G++ S   AG ++ +L
Sbjct: 133 IH-RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVDLSGIKAGSTVAIL 189

Query: 158 GGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED------ 210
            G G +G + +QLA+   GA+ V  +     K  L   +GA   +D +  ++ +      
Sbjct: 190 -GGGVIGLLTVQLARL-AGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPV 247

Query: 211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG------SVTPPASSFV---LTS 256
             +P   DVV +  G      ++ +  K GG VV I+G       V       +   L  
Sbjct: 248 GLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVV-ILGVLPQGEKVEIEPFDILFRELRV 306

Query: 257 DGSIL-----EKLNPYFESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
            GS +      +      +G   +  +I  +      +  +  S+  ++    KV++ P
Sbjct: 307 LGSFINPFVHRRAADLVATGAIEIDRMISRR--ISLDEAPDVISNPAAAGE-VKVLVIP 362

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  159 bits (405), Expect = 1e-46
 Identities = 82/349 (23%), Positives = 136/349 (38%), Gaps = 49/349 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA + K++    S+     +V +P  + ++VLI++  A +   D +   G  +     L
Sbjct: 4   SKAALLKKFSEPLSI----EDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRL 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK-----R 102
           P I G++ AG + +VG  + K K GD V  Y                    +        
Sbjct: 60  PIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTT 118

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---SILVLGG 159
           NG  +EY  V+ +   +K  +LS VEAA L  A  T+   + ++     K    ++++ G
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNG 178

Query: 160 AGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTK--ENIEDLPEK-- 214
            GG+    IQ+ K +     +   S S    D    LGAD   +       I  L +   
Sbjct: 179 IGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLG 238

Query: 215 FDVVFDAVGQ---CDKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSI----- 260
             +  D VG         K + + G ++ + +        +F          GS      
Sbjct: 239 ASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLN 298

Query: 261 -LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
            LE +    ESGK+K  I      P     +AF++L+  R  G+ VI P
Sbjct: 299 DLEDVVRLSESGKIKPYII---KVPLDDINKAFTNLDEGRVDGRQVITP 344

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  157 bits (400), Expect = 6e-46
 Identities = 64/366 (17%), Positives = 130/366 (35%), Gaps = 78/366 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPI---DFKRMLGAFSAT 56
           MK+ V    G     ++      +P ++ +D+V +K+ ++    +   D  R+    +  
Sbjct: 1   MKSVVNDTDGI----VRVA-ESVIPEIKHQDEVRVKIASSG---LCGSDLPRIFKNGAH- 51

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEKAL 97
               P   G++ +G ++ VGS V     GD V                           +
Sbjct: 52  --YYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFI 109

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
               R+G  AEY  V+   +   P ++   + A + P+           +     K++++
Sbjct: 110 GSR-RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITV--GLHAFHLAQGCENKNVII 166

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           +G AG +G + IQ A    GA  V A   S+ KL L +S GA    + ++ +   +    
Sbjct: 167 IG-AGTIGLLAIQCAVA-LGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVL 224

Query: 215 -----FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFV-----------LT 255
                  ++ +  G     + A++      ++  ++G                     LT
Sbjct: 225 RELRFNQLILETAGVPQTVELAVEIAGPHAQLA-LVG-TLHQDLHLTSATFGKILRKELT 282

Query: 256 SDGSILEKLNPY-----------FESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATG 302
             GS +   +P+               K  ++ +I  +    F    +A   +  +   G
Sbjct: 283 VIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHR--GSFESFAQAVRDIARNAMPG 340

Query: 303 KVVIHP 308
           KV++ P
Sbjct: 341 KVLLIP 346

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  155 bits (394), Expect = 4e-45
 Identities = 80/354 (22%), Positives = 126/354 (35%), Gaps = 55/354 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA  Y E G+   V     ++  P+    ++L+KV AA L   D   M    +     L
Sbjct: 1   MKAVQYTEIGSEPVV----VDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------------YGDINEKAL 97
           P   G++  G V ++G  V  F VGD V                                
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA--FSAGKSIL 155
                 GS+AEY  V+     +   +L  V AA L  A  T Y  + R       G + +
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           V+G  GG+G + IQ+ + V  A  +A      +L L R +GAD A+       + + E  
Sbjct: 177 VIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELT 235

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSIIG----SVTPPASSFVLTS---DGSI 260
                  VFD VG     D A + V   G +  ++G    +        +          
Sbjct: 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHIS-VVGIHAGAHAKVGFFMIPFGASVVTPY 294

Query: 261 ------LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
                 L ++     +G++    +    F   +   A+  L      G+ V+ P
Sbjct: 295 WGTRSELMEVVALARAGRLDIHTE---TFTLDEGPAAYRRLREGSIRGRGVVVP 345

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  153 bits (388), Expect = 5e-44
 Identities = 79/352 (22%), Positives = 142/352 (40%), Gaps = 52/352 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAF-SATDS 58
           +KA    EY      L+ E  V+ P L     V++++  A +   D   + G +      
Sbjct: 16  LKAARLHEYNKP---LRIED-VDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP 71

Query: 59  PLPTIPGYDVAGVVEKVGSQVKKFKVGDEV--YGDI-----------NEKALDHPK---- 101
            LP   G++  G +E+V   V+  + GD V  +  +            +   ++ +    
Sbjct: 72  KLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL 131

Query: 102 -RNGSLAEYTAVEENLLALKPKNLSF---VEAASLPLATETAYEGLERSAFS--AGKSIL 155
             +G  AE+       +   PK++S    VE A L  A  TAY  ++++A +   G  + 
Sbjct: 132 NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVA 191

Query: 156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK- 214
           +  G GG+G + +QL K +  A+ +A      KL L   LGAD  +D  ++ ++ + E  
Sbjct: 192 I-VGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELT 250

Query: 215 ----FDVVFDAVGQ---CDKALKAVKEGGRVVSI--IGSVTPPASSFVLTS---DGSI-- 260
                +V  D VG     D     +   GR++ +   G +  P    + +    +GS+  
Sbjct: 251 RGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVG 310

Query: 261 ----LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 308
               L +L      GKV+  +D        +  +    LE     G+ V+ P
Sbjct: 311 NYVELHELVTLALQGKVRVEVD---IHKLDEINDVLERLEKGEVLGRAVLIP 359

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  143 bits (364), Expect = 1e-40
 Identities = 81/361 (22%), Positives = 140/361 (38%), Gaps = 73/361 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---D---FKRMLGAFS 54
           M+A            L    +  VP     ++L++V AA+   I   D   +K    A++
Sbjct: 1   MRALAKLAPEEG---LTLV-DRPVPEPGPGEILVRVEAAS---ICGTDLHIWKW--DAWA 51

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEK 95
                 P + G++ +GVVE VG  V++ +VGD V  +                   +N +
Sbjct: 52  RGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ 111

Query: 96  ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSI 154
            L    R+G  AEY  V      + PK+L F  AA L P     A   +   +  +GKS+
Sbjct: 112 ILGVD-RDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFG--NAVHTVYAGSGVSGKSV 168

Query: 155 LVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED--- 210
           L+  GAG +G M   + +   GA  +  +  +  +L   R       ++  +E++ +   
Sbjct: 169 LIT-GAGPIGLMAAMVVRA-SGAGPILVSDPNPYRLAFARPYADR-LVNPLEEDLLEVVR 225

Query: 211 --LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSD-------- 257
                  +V+ +  G      + L A+  GG     I  +      F L  +        
Sbjct: 226 RVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEAR--ILGIPSDPIRFDLAGELVMRGITA 283

Query: 258 -GSILEKLNPYF-------ESGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 307
            G    +L   +        SG+  +  ++  +   P S+  EAF  L S +A  KV++ 
Sbjct: 284 FGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHR--LPLSRYREAFGLLASGQA-VKVILD 340

Query: 308 P 308
           P
Sbjct: 341 P 341

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  142 bits (359), Expect = 8e-40
 Identities = 57/368 (15%), Positives = 108/368 (29%), Gaps = 87/368 (23%)

Query: 15  VLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA---------------------- 52
            L  ++ ++ P    D+VLI++ A+ LNP D   + GA                      
Sbjct: 19  ELSLDS-IDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVP 77

Query: 53  -----FSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLA 107
                  A         G + AGVV + GS      +  +    I              +
Sbjct: 78  EGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG---------GAMYS 128

Query: 108 EYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMV 167
           +Y  +  +   + P+  +  + AS  +   TA   +E        +++    A  +G M+
Sbjct: 129 QYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQML 188

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDA 221
            Q+     G   V       + DLL++ GA    +                    + FDA
Sbjct: 189 NQICLK-DGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDA 247

Query: 222 VG------QCDKALKAV------------KEGGRVVSIIGSVTPPASSF------VLTSD 257
            G      Q    ++A                 + V + G +    + F           
Sbjct: 248 TGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMG 307

Query: 258 GSIL---------EKLNPYFE------SGKVKAIIDPKGPFPFSQ--TLEAFSHLESSRA 300
           G +L         E+ N   +           +    +     ++   L+  +       
Sbjct: 308 GWLLFPFLQKIGRERANALKQRVVAELKTTFASHYSKE--ISLAEVLDLDMIAVYNKRAT 365

Query: 301 TGKVVIHP 308
             K +I+P
Sbjct: 366 GEKYLINP 373

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  141 bits (357), Expect = 1e-39
 Identities = 90/358 (25%), Positives = 145/358 (40%), Gaps = 69/358 (19%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPI---DFKRML-GAFSAT 56
           M A +  + G      +    V+VP     +VLIKV+A +   I   D        ++ +
Sbjct: 5   MVAIMKTKPGYG---AELV-EVDVPKPGPGEVLIKVLATS---ICGTDLHIYEWNEWAQS 57

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGD-------------------INEKAL 97
               P I G++VAG V ++G  V+  +VGD V  +                    N K  
Sbjct: 58  RIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF 117

Query: 98  DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILV 156
                +G  AEY  V    +   PK++    A    PL    A + +  +   +GKS+L+
Sbjct: 118 GVD-TDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGN--AVDTV-LAGPISGKSVLI 173

Query: 157 LGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIEDL---- 211
            G AG +G + I +AK   GA  V  +  S  + +L + +GAD  I+  +E++       
Sbjct: 174 TG-AGPLGLLGIAVAKA-SGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDI 231

Query: 212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG----SVTPPASSFV----LTSDG 258
                 DV  +  G     ++ L+AV   GRV  ++G     VT   ++ +    LT  G
Sbjct: 232 TDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVS-LLGLYPGKVTIDFNNLIIFKALTIYG 290

Query: 259 SILEKLNPYFE-------SGK--VKAIIDPKGPFP-FSQTLEAFSHLESSRATGKVVI 306
                L   +        SGK  +  II     +  F +  EAF  + + +  GKVV 
Sbjct: 291 ITGRHLWETWYTVSRLLQSGKLNLDPIIT--HKYKGFDKYEEAFELMRAGKT-GKVVF 345

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  142 bits (359), Expect = 5e-38
 Identities = 82/323 (25%), Positives = 124/323 (38%), Gaps = 56/323 (17%)

Query: 19  ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ 78
           +       L + +V I + AA +N  D    LG +     P     G + AGVV + G  
Sbjct: 228 DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY-----PGVASLGSEGAGVVVETGPG 282

Query: 79  VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATET 138
           V     GD V G              +       +  ++   P   SF  AAS+P+   T
Sbjct: 283 VTGLAPGDRVMG----------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLT 332

Query: 139 AYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----- 192
           AY  L   A    G+S+LV   AGGVG   IQLA+H+ GA +V AT+S  K   +     
Sbjct: 333 AYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHL-GA-EVYATASEDKWQAVELSRE 390

Query: 193 -----RSLG-ADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALKAVKEGGRVVSI--- 241
                R+       +  T           DVV +++     D +L+ +  GGR + +   
Sbjct: 391 HLASSRTCDFEQQFLGATGG------RGVDVVLNSLAGEFADASLRMLPRGGRFLELGKT 444

Query: 242 -IGSVTPPA--------SSFVLTSDG-----SILEKLNPYFESGKVKAIIDPKGPFPFSQ 287
            +      A         +F     G      +L +L   FE   ++ +  P   +   Q
Sbjct: 445 DVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--PVTAWDVRQ 502

Query: 288 TLEAFSHLESSRATGKVVIHPIP 310
             EA  HL  +R  GK+V+   P
Sbjct: 503 APEALRHLSQARHVGKLVLTMPP 525

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  136 bits (344), Expect = 9e-38
 Identities = 87/345 (25%), Positives = 135/345 (39%), Gaps = 50/345 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V + +G     L  +  V VP     QV +K+ A+ +   D     G +      L
Sbjct: 3   MKAAVVRAFGAP---LTIDE-VPVPQPGPGQVQVKIEASGVCHTDLHAADGDW-PVKPTL 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDI----------NEKALDHPK----- 101
           P IPG++  G V  VGS V + K GD V                   E   +  +     
Sbjct: 58  PFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYS 117

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            NG   EY   + N + L P  + FVE A +  A  T Y+GL+ +    G+ + V+ G G
Sbjct: 118 VNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWV-VISGIG 176

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK----FDV 217
           G+G + +Q A+   G    A     AKL+L R LGA++A++    +     +K       
Sbjct: 177 GLGHVAVQYARA-MGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHG 235

Query: 218 VFDAVGQ---CDKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSIL------- 261
           V           +A+  V+ GG +    +         F +        GSI+       
Sbjct: 236 VLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQ 295

Query: 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           E L+ +   G VKA +            + F  L   +  G+VV+
Sbjct: 296 ESLD-FAAHGDVKATVS---TAKLDDVNDVFGRLREGKVEGRVVL 336

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  135 bits (341), Expect = 3e-37
 Identities = 83/364 (22%), Positives = 138/364 (37%), Gaps = 74/364 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID---FKRMLGAFSATD 57
             + V    G+    L+ E N  +P    ++VL+++ +  +   D   ++   G      
Sbjct: 8   NLSLVVHGPGD----LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEY--GRIGNFI 60

Query: 58  SPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE----KALD 98
              P + G++ +G VEKVGS VK  K GD V                G  N         
Sbjct: 61  VKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA 120

Query: 99  HPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVL 157
            P  +G+L  +           P N++F E A + PL+         R   + G  +LV 
Sbjct: 121 TPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSV--GIHACRRGGVTLGHKVLVC 178

Query: 158 GGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENIED------ 210
           G AG +G + + +AK   GA++V  T  S  +L   + +GADL +  +KE+ ++      
Sbjct: 179 G-AGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE 236

Query: 211 --LPEKFDVVFDAVG--QC-DKALKAVKEGGRVVSIIG----SVTPPASSFV---LTSDG 258
             L  K +V  +  G        + A + GG +V ++G      T P        +   G
Sbjct: 237 GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLV-LVGLGSEMTTVPLLHAAIREVDIKG 295

Query: 259 SILEKLNPYFE----------SGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
                   Y            S    VK ++     FP  + LEAF   +      K+++
Sbjct: 296 VFR-----YCNTWPVAISMLASKSVNVKPLVT--HRFPLEKALEAFETFKKGLG-LKIML 347

Query: 307 HPIP 310
              P
Sbjct: 348 KCDP 351

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  131 bits (332), Expect = 4e-36
 Identities = 96/345 (27%), Positives = 148/345 (42%), Gaps = 50/345 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++      LK +  VE P++   +VL+++ A  +   D     G +      L
Sbjct: 1   MKAAVVEQFKEP---LKIKE-VEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV-KPKL 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----YG---------DINEKALDHPK----- 101
           P IPG++  G+VE+VG  V   KVGD V     Y             E   +H K     
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +G  AEY     + +   P NLSF EAA +  A  T Y+ L+ +    G+ + + G  G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGI-G 174

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDLPEK---FDV 217
           G+G + +Q AK   G + VA      KL+L + LGADL ++  KE+  + + EK      
Sbjct: 175 GLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 218 VFDAVGQC---DKALKAVKEGGRVVSI-IGSVTPPASSFVLTSD-----GSIL------- 261
                        A  +++ GG  V + +     P   F    +     GSI+       
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 293

Query: 262 EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
           E L  +   GKVK II+     P  +  E F  +   +  G+VV+
Sbjct: 294 EALQ-FAAEGKVKTIIE---VQPLEKINEVFDRMLKGQINGRVVL 334

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  131 bits (331), Expect = 8e-36
 Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 54/349 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            K  ++ E       L+++  + VP  + +++LI V  + +   D     G +      L
Sbjct: 6   QKGVIFYESH---GKLEYKD-IPVPKPKANELLINVKYSGVCHTDLHAWHGDW-PLPVKL 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDI----------NEKALDHPK----- 101
           P + G++ AGVV  +G  VK +K+GD                    NE    H       
Sbjct: 61  PLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 120

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAG 161
            +GS  +Y   +    A  P+     + A +  A  T Y+ L+ +   AG  + + G AG
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAG 180

Query: 162 GVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN------IEDLPEKF 215
           G+G++ +Q AK   G   +       K +L RS+G ++ ID+TKE       ++      
Sbjct: 181 GLGSLAVQYAK-AMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGA 239

Query: 216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIG---SVTPPASSFVLTSD-----GSIL--- 261
             V +        + + + V+  G  V ++G        +  F          GS +   
Sbjct: 240 HGVINVSVSEAAIEASTRYVRANGTTV-LVGMPAGAKCCSDVFNQVVKSISIVGSYVGNR 298

Query: 262 ----EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 306
               E L+ +F  G VK+ I        S   E +  +E  +  G+ V+
Sbjct: 299 ADTREALD-FFARGLVKSPIK---VVGLSTLPEIYEKMEKGQIVGRYVV 343

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  128 bits (325), Expect = 6e-35
 Identities = 86/370 (23%), Positives = 139/370 (37%), Gaps = 87/370 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAAL----------NPIDFKRML 50
             + V  +  +    L+ E    +P  +ED+VL+++    +            I      
Sbjct: 5   NLSAVLYKQND----LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRI------ 53

Query: 51  GAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------YGDINE- 94
             F   D   P + G++ +G V KVG  VK  K GD V                G  N  
Sbjct: 54  ADFIVKD---PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC 110

Query: 95  ---KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSA 150
                   P  +G+LA Y     +     P N+S  E A L PL+         R+    
Sbjct: 111 PDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACRRAGVQL 168

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENI 208
           G ++LV+ GAG +G + +  AK  +GA  V    S  +L++ ++ GAD  L +D  KE  
Sbjct: 169 GTTVLVI-GAGPIGLVSVLAAKA-YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEE 226

Query: 209 EDLPEK--------FDVVFDAVG--QC-DKALKAVKEGGRVVSIIG----SVTPPASSFV 253
             + E+         +V  D  G  +C    +   + GG ++ ++G     VT P  +  
Sbjct: 227 SSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLM-LVGMGSQMVTVPLVNAC 285

Query: 254 ---LTSDGSI---------LEKLNPYFESGK--VKAIIDPKGPFPFSQTLEAFSHLESSR 299
              +               LE +     SG+  VK ++     F   QT++AF       
Sbjct: 286 AREIDIKSVFRYCNDYPIALEMV----ASGRCNVKQLVT--HSFKLEQTVDAFEAARKKA 339

Query: 300 ATG-KVVIHP 308
               KV+I  
Sbjct: 340 DNTIKVMISC 349

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  128 bits (323), Expect = 2e-34
 Identities = 68/376 (18%), Positives = 132/376 (35%), Gaps = 79/376 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAA-----LNPIDFKRMLGAFS 54
           + + V++        ++ E  V  P + +  +++IKV A       ++            
Sbjct: 32  LGSKVWRYPE-----VRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILY 85

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQV------KKFKVGDEVYGD----------------- 91
              +  P   G++ +GVV + G +       K+F++G+ V  +                 
Sbjct: 86  PGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPN 145

Query: 92  --INEKALDHPKRNGSLAEYTAVEENLL-------ALKPKNLSFVEAASL-PLATETAYE 141
              N   L     +G+ AEY  V+            +   +  F+  + + P +      
Sbjct: 146 HCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAV 204

Query: 142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLA 200
            +       G ++++LG  G +G   + + KH  GASKV  +  S  + +L + LGAD  
Sbjct: 205 IVRGGGIRPGDNVVILG-GGPIGLAAVAILKH-AGASKVILSEPSEVRRNLAKELGADHV 262

Query: 201 IDYTKENIEDL------PEKFDVVFDAVGQ---CDKALKAVKEGGR-VVSIIGSVTPPAS 250
           ID TKEN  +            +  +A G        ++ V    R + + +  V    +
Sbjct: 263 IDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA 322

Query: 251 SFVLTSD----------GSIL-------EKLNPYFESG-KVKAIIDPKGPFPFSQTLEAF 292
              LT +          GS          ++     SG  +  II         +  E  
Sbjct: 323 KIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDMTKIISKT--VSMEEIPEYI 380

Query: 293 SHLESSRATGKVVIHP 308
             L++ ++  KV +  
Sbjct: 381 KRLQTDKSLVKVTMLN 396

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  125 bits (316), Expect = 2e-33
 Identities = 68/375 (18%), Positives = 133/375 (35%), Gaps = 81/375 (21%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A V +++      L ++   E+  +    +L+++++A +   D     G       PL
Sbjct: 18  AHAMVLEKFNQP---LVYKE-FEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPL 71

Query: 61  PTIPGYDVAGVVEKVGSQVK-----KFKVGDEVYGD------------------------ 91
           P I G++ AG V +V  + +       K GD +  +                        
Sbjct: 72  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131

Query: 92  ---INEKALDHPKRNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYEGLERS 146
              IN    ++P   G  + +  +  E ++L +  +       A    +  TAY   +  
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKV-SEKDDLDVLAMAMCSGATAYHAFDEY 190

Query: 147 AF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYT 204
               AGK++++ G AG +G   + +A+ + GA  V     S  +L L   +GADL ++  
Sbjct: 191 PESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNRR 248

Query: 205 KENIEDLPEK---------FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS-- 250
           + ++E+  +           D + +A G      +  + ++ GG    + G V  P    
Sbjct: 249 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYS-VAG-VAVPQDPV 306

Query: 251 SFVLTSD---------GSI------LEKLNPYFESGKVKAIIDP--KGPFPFSQTLEAFS 293
            F +            G          K             +        P  +  +A  
Sbjct: 307 PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQL--LSKLITHRLPLKEANKALE 364

Query: 294 HLESSRATGKVVIHP 308
            +ES  A  KV+++P
Sbjct: 365 LMESREA-LKVILYP 378

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  116 bits (292), Expect = 3e-30
 Identities = 74/356 (20%), Positives = 116/356 (32%), Gaps = 84/356 (23%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPI---D---FKRMLGAFSATDSPLPTIPGYDVA 69
              E+  +   L+E +V + V +     I   D   +K   G           + G++ A
Sbjct: 27  PSLESVQKGEELKEGEVTVAVRSTG---ICGSDVHFWKH--GCIGPMIVECDHVLGHESA 81

Query: 70  GVVEKVGSQVKKFKVGDEV---------------YGDINEKALDH-------PKRNGSLA 107
           G V  V   VK  KVGD V                G  N             P   G L 
Sbjct: 82  GEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYN---GCERVDFLSTPPVPGLLR 138

Query: 108 EYTAVEENLLALKPKNLSFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTM 166
            Y          K  N+S+   A L PL+   A  GL+R+    G  +L+ G AG +G +
Sbjct: 139 RYVNHPAVWC-HKIGNMSYENGAMLEPLSV--ALAGLQRAGVRLGDPVLICG-AGPIGLI 194

Query: 167 VIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTK-ENIEDLPEK---------F 215
            +  AK   GA  +  T     +L   + +  ++     +  + E+  +K          
Sbjct: 195 TMLCAKA-AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEP 253

Query: 216 DVVFDAVG--QC-DKALKAVKEGGRVVSIIG----SVTPPASSFV---LTSDGSILEKLN 265
            V  +  G       A+ AVK GG+V  +IG     +  P        +           
Sbjct: 254 AVALECTGVESSIAAAIWAVKFGGKVF-VIGVGKNEIQIPFMRASVREVDLQFQYR---- 308

Query: 266 PYFE----------SGK--VKAIIDPKGPFPFSQTLEAFSHLESSRATG-KVVIHP 308
            Y            +G   +  ++     FP    L+AF      +    KV I  
Sbjct: 309 -YCNTWPRAIRLVENGLVDLTRLVT--HRFPLEDALKAFETASDPKTGAIKVQIQS 361

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  115 bits (291), Expect = 5e-30
 Identities = 61/374 (16%), Positives = 118/374 (31%), Gaps = 90/374 (24%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPID------FKRMLGAFS 54
           MKA   K   +             P     + L++ +      +            G F 
Sbjct: 1   MKAIAVKRGEDR---PVVI-EKPRPEPESGEALVRTLRVG---VCGTDHEVIAGGHGGFP 53

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-----------------------D 91
             +  L  + G++  GVV        + + GD V                         D
Sbjct: 54  EGEDHL--VLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPD 109

Query: 92  INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL--PLATETAYEGLERSAFS 149
                      +G ++E+    E  L   P++ +  E   L  P++     + LE +  S
Sbjct: 110 GMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISI--TEKALEHAYAS 165

Query: 150 A------GKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSST----AKLDLLRSLGAD 198
                    S  VLG  G +G + + + K    G   +            +D++  L A 
Sbjct: 166 RSAFDWDPSSAFVLG-NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224

Query: 199 LAI--DYTKENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIG-----SVTPP 248
                    E++ D+ E+ D +++A G      ++++A+   G    ++G     +    
Sbjct: 225 YVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGA-LLGVPSDWAFEVD 283

Query: 249 ASSFV-------LTSDGSILEKLNPYF-------ESGK--VKAIIDPKGPFPFSQTLEAF 292
           A +F            GS+   +  +        +  K  ++ ++   G  P S+   AF
Sbjct: 284 AGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVT--GVHPLSEFEAAF 341

Query: 293 SHLESSRATGKVVI 306
              +    T K  I
Sbjct: 342 ---DDDDTTIKTAI 352

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  114 bits (288), Expect = 1e-29
 Identities = 57/377 (15%), Positives = 106/377 (28%), Gaps = 85/377 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPID------FKRMLGAF 53
           MKA + K       V     +V+   L    ++ I+ +      I           L   
Sbjct: 1   MKAIIVKPPNAGVQV----KDVDEKKLDSYGKIKIRTIYNG---ICGADREIVNGKLTLS 53

Query: 54  SATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE------------------- 94
           +        + G++  GVVE+       F  GD V                         
Sbjct: 54  TLPKGKDFLVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETG 110

Query: 95  --KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLA------------TETAY 140
                   K +G + E+   +   L   PK++  +   + PLA             +   
Sbjct: 111 EFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVP 170

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA 200
                      + +LV+G  G +G +   L +  +G     A       ++ +++  +  
Sbjct: 171 VWTCDDGTLNCRKVLVVG-TGPIGVLFTLLFRT-YGLEVWMANRR-EPTEVEQTVIEETK 227

Query: 201 IDYTK-----ENIEDLPEKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASS 251
            +Y       + ++D   KFDV+ DA G         +  +   G +  + G  T  +  
Sbjct: 228 TNYYNSSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLG-LFGFSTSGSVP 286

Query: 252 FV-----------LTSDGSILEKLNPY------FESGKVKAIIDPK----GPFPFSQTLE 290
                         T  G +  +   +        S K       K         +   E
Sbjct: 287 LDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKE 346

Query: 291 AFSHLESSRATG-KVVI 306
               L        K+ I
Sbjct: 347 LLKVLREKEHGEIKIRI 363

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  106 bits (266), Expect = 1e-25
 Identities = 59/317 (18%), Positives = 101/317 (31%), Gaps = 52/317 (16%)

Query: 25   PSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKV 84
                    L  V   +LN  D     G          +IPG  +            +   
Sbjct: 1555 LPASCQDRLCSVYYTSLNFRDVMLATGKL-----SPDSIPGKWLTRDCMLGMEFSGRDAS 1609

Query: 85   GDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL- 143
            G  V G +             LA    + ++     P   +  EAAS+P+   TAY  L 
Sbjct: 1610 GRRVMGMV---------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLV 1660

Query: 144  ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY 203
             R     G+S+L+  G+GGVG   I +A    G        S  K   L++    L    
Sbjct: 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALS-RGCRVFTTVGSAEKRAYLQARFPQLDETC 1719

Query: 204  -----TKENIEDLPEK-----FDVVFDAVGQ--CDKALKAVKEGGRVVSI---------- 241
                      + +         D+V +++ +     +++ + + GR + I          
Sbjct: 1720 FANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHA 1779

Query: 242  --IGSVTPPASSFVLTSD----------GSILEKLNPYFESGKVKAIIDPKGPFPFSQTL 289
              +       +   +  D            + E L    + G V+        FP ++  
Sbjct: 1780 LGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQP--LKCTVFPRTKVE 1837

Query: 290  EAFSHLESSRATGKVVI 306
             AF ++   +  GKVVI
Sbjct: 1838 AAFRYMAQGKHIGKVVI 1854

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 93.5 bits (233), Expect = 4e-22
 Identities = 65/261 (24%), Positives = 98/261 (37%), Gaps = 38/261 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           M+A + ++          +  +E   L    V + V  ++LN   +K  L   + T    
Sbjct: 1   MQALILEQQDGKTLA-SVQH-LEESQLPAGDVTVDVHWSSLN---YKDAL---AITGKGK 52

Query: 60  ----LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTA 111
                P IPG D AG V    S+  +F  G EV    +G + E         G LAE   
Sbjct: 53  IIRHFPMIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWG-VGE------NHWGGLAERAR 103

Query: 112 VEENLLALKPKNLSFVEAASLPLATETA----YEGLERSAFSAGKSILVLGGAGGVGTMV 167
           V+ + L   P  LS   A  +  A  TA        +         ++V G +GGVG+  
Sbjct: 104 VKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTA 163

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP---EKFDVVFDAVG- 223
           + L     G    A +   +    L+SLGA+  +    E  E  P   + +    D VG 
Sbjct: 164 VALLHK-LGYQVAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGAIDTVGD 221

Query: 224 -QCDKALKAVKEGGRVVSIIG 243
               K L  +  GG  V+  G
Sbjct: 222 KVLAKVLAQMNYGG-CVAACG 241

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 91.5 bits (228), Expect = 3e-21
 Identities = 72/372 (19%), Positives = 127/372 (34%), Gaps = 89/372 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAA-----LNPIDFKRMLGAFSA 55
           MK +     G     + +    E P+      +++ +A A     ++ +           
Sbjct: 1   MKGFAMLSIGK----VGWIE-KEKPAPGPFDAIVRPLAVAPCTSDIHTVF-----EGAIG 50

Query: 56  TDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV----------------------YGDIN 93
                  I G++  G V +VGS+VK FK GD V                       G + 
Sbjct: 51  ERHN--MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLA 108

Query: 94  EKALDHPKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
                + K +G   E+  V   + NL  L PK +    A  +P    T + G E +    
Sbjct: 109 GWKFSNVK-DGVFGEFFHVNDADMNLAHL-PKEIPLEAAVMIPDMMTTGFHGAELANIKL 166

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDYTKEN-I 208
           G ++ V+G  G VG M +  A H  GA ++ A  S     D+    GA   I+Y   + +
Sbjct: 167 GDTVCVIG-IGPVGLMSVAGANH-LGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIV 224

Query: 209 EDLPEK-----FDVVFDAVGQC---DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSI 260
           E + +       D V  A G      +A+K +K G   +  +  +    +  +  S+  +
Sbjct: 225 EQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGS-DIGNVNYLGEGDNIDIPRSEWGV 283

Query: 261 ------------------LEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLE------ 296
                             +E+L       +    +DP      +     F ++E      
Sbjct: 284 GMGHKHIHGGLCPGGRLRMERLIDLVFYKR----VDPS--KLVTHVFRGFDNIEKAFMLM 337

Query: 297 SSRATG--KVVI 306
             +     K V+
Sbjct: 338 KDKPKDLIKPVV 349

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 90.1 bits (224), Expect = 7e-21
 Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 40/262 (15%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           +A+V  +     +    +T + +  L E  VL++V  +++N   +K  L   ++      
Sbjct: 5   QAFVVNKTETEFTA-GVQT-ISMDDLPEGDVLVRVHYSSVN---YKDGL---ASIPDGKI 56

Query: 60  ---LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P +PG D+AGVV    SQ  +F+ GDEV    Y  I           G  +EY  +
Sbjct: 57  VKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYE-IGVT------HFGGYSEYARL 107

Query: 113 EENLLALKPKNLSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVI 168
               L   PK L+  EA ++  A  TA   +    E         +LV G  GGVG++ +
Sbjct: 108 HGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAV 167

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
            +     G +  A+T   A+ D LR LGA   +   ++ + +       +++    D VG
Sbjct: 168 SMLAK-RGYTVEASTGKAAEHDYLRVLGAKEVLA-REDVMAERIRPLDKQRWAAAVDPVG 225

Query: 224 --QCDKALKAVKEGGRVVSIIG 243
                  L  ++ GG  V++ G
Sbjct: 226 GRTLATVLSRMRYGG-AVAVSG 246

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 88.9 bits (221), Expect = 2e-20
 Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 40/262 (15%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP-- 59
           +A   ++  +  SV   +T +    L +D VLIKV  + +N   +K  L   +       
Sbjct: 6   QALQAEKNADDVSV-HVKT-ISTEDLPKDGVLIKVAYSGIN---YKDGL---AGKAGGNI 57

Query: 60  ---LPTIPGYDVAGVVEKVGSQVKKFKVGDEV----YGDINEKALDHPKRNGSLAEYTAV 112
               P I G D AG V    S   +F  GDEV    Y  +         R+G L+EY +V
Sbjct: 58  VREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYE-LGV------SRDGGLSEYASV 108

Query: 113 EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFS----AGKSILVLGGAGGVGTMVI 168
             + L   P+NLS  EA     A  TA   + R   +       S+LV G  GGVG + +
Sbjct: 109 PGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAV 168

Query: 169 QLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP-----EKFDVVFDAVG 223
            +     G   VA+T +    D L+ LGA   I   ++  +        +++    D VG
Sbjct: 169 SMLNK-RGYDVVASTGNREAADYLKQLGASEVIS-REDVYDGTLKALSKQQWQGAVDPVG 226

Query: 224 --QCDKALKAVKEGGRVVSIIG 243
             Q    L  ++ GG  V++ G
Sbjct: 227 GKQLASLLSKIQYGG-SVAVSG 247

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 87.2 bits (217), Expect = 7e-20
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 49/260 (18%)

Query: 2   KAWVYKEY--GN-SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
           K+W  K++  G  +QS  + +T VE+P L+  +VL++ +  +++P               
Sbjct: 9   KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIAS--------K 59

Query: 59  PLP---TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEEN 115
            L     + G  VA VVE   S+   F  G  V                    +   +  
Sbjct: 60  RLKEGAVMMGQQVARVVE---SKNSAFPAGSIVLA------------QSGWTTHFISDGK 104

Query: 116 LLALKPKNLSFVEAASLPLATE-------TAYEGLERSA-FSAGKSILVLGGAGGVGTMV 167
              L+     + +   L LA         TAY GL        G+++LV   AG VG++V
Sbjct: 105 --GLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVV 162

Query: 168 IQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN--IEDL----PEKFDVVFDA 221
            Q+AK + G   V A  S  K+  L+ +G D A +Y   N   E L    P+ +D  FD 
Sbjct: 163 GQIAK-LKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 221

Query: 222 VG--QCDKALKAVKEGGRVV 239
           VG    +  L  +K+ G++ 
Sbjct: 222 VGGEFLNTVLSQMKDFGKIA 241

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 115 NLLALKPKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKH 173
           +L+   P  L+  EAA+  +A  TA+  L      S G+ +L+    GGVG   + +AK 
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61

Query: 174 VFGASKVAAT-SSTAKLDLLRSLGAD 198
           + GA ++  T  S AK ++L  LG +
Sbjct: 62  I-GA-RIYTTAGSDAKREMLSRLGVE 85

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 78.8 bits (195), Expect = 9e-17
 Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 53/269 (19%)

Query: 2   KAWVYKEY--GN-SQSVLKFETNVEVPS---LREDQVLIKVVAAALNPIDFKRMLGAFSA 55
           K  + K+Y  G  ++S   F T   V        + VL+K +  + +P    RM     +
Sbjct: 6   KQVILKDYVSGFPTESDFDFTT-TTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64

Query: 56  TDSPLP------TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEY 109
           T +          I GY V+ ++E   S    +K GD ++G              +  EY
Sbjct: 65  TAALAQAYTPGQPIQGYGVSRIIE---SGHPDYKKGDLLWG------------IVAWEEY 109

Query: 110 TAVEENLLALKPKNLSFVEAASLPLAT---------ETAYEGLERSA-FSAGKSILVLGG 159
           + +     A        ++   +PL+           TAY G         G+++ V   
Sbjct: 110 SVITPMTHAHFK-----IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAA 164

Query: 160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKEN--IEDL----P 212
           +G VG +V QLAK + G   V +  S  K+DLL++  G D A +Y +E+     L    P
Sbjct: 165 SGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP 223

Query: 213 EKFDVVFDAVG--QCDKALKAVKEGGRVV 239
              D+ F+ VG    D  L  +   GR+ 
Sbjct: 224 NGIDIYFENVGGKMLDAVLVNMNMHGRIA 252

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGD---------------------EVY-----G 90
            S  P +PG+++ G V +VGS+VKK  VGD                     E Y      
Sbjct: 67  FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL 126

Query: 91  DINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERS-AF 148
                  D     G  + +    E    ++ P N+     A L  A  T Y  L+     
Sbjct: 127 TYASIYHDGTITYGGYSNHMVANERY-IIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLD 185

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYT-KE 206
             GK I ++G  GG+G + ++ AK  FG+     ++S +K  + L++ GAD  +    +E
Sbjct: 186 EPGKHIGIVGL-GGLGHVAVKFAK-AFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE 243

Query: 207 NIEDLPEKFDVVFDAV 222
            ++      D + D V
Sbjct: 244 QMQAAAGTLDGIIDTV 259

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 38/196 (19%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV---------------------------- 88
           +   P IPG+++AG++++VG  VKKFK+GD V                            
Sbjct: 55  EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF 114

Query: 89  -YGDINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERS 146
            Y  + +   D+    G  +    V+EN   +   KN    + A L  A  T Y  L+ S
Sbjct: 115 TYDCL-DSFHDNEPHMGGYSNNIVVDENY-VISVDKNAPLEKVAPLLCAGITTYSPLKFS 172

Query: 147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE 206
             + G  + V G  GG+G+M ++ A    GA       +  K     S+G        K+
Sbjct: 173 KVTKGTKVGVAG-FGGLGSMAVKYAV-AMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQ 230

Query: 207 NIEDLPEKFDVVFDAV 222
                 E+ D +   +
Sbjct: 231 ----CKEELDFIISTI 242

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 77.6 bits (192), Expect = 2e-16
 Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQVKKFKVGD---------------------EVY-----G 90
            S  P +PG++V G V +VGS V KF VGD                     E Y      
Sbjct: 60  MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW 119

Query: 91  DINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERSAF- 148
             N+  ++     G  A+ T V +    +K P+ ++  +AA L  A  T Y  L      
Sbjct: 120 SYNDVYINGQPTQGGFAKATVVHQKF-VVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLK 178

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLAIDYT-KE 206
             G    +LG  GGVG M +++AK   G      +SS  K  + L+ LGAD  +  + + 
Sbjct: 179 QPGLRGGILGL-GGVGHMGVKIAK-AMGHHVTVISSSNKKREEALQDLGADDYVIGSDQA 236

Query: 207 NIEDLPEKFDVVFDAV 222
            + +L +  D V D V
Sbjct: 237 KMSELADSLDYVIDTV 252

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 37/227 (16%)

Query: 27  LREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGD 86
              + V I++    +   D  ++   ++   +  P +PG+++ G V  VG QV+K+  GD
Sbjct: 45  PGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEIVGRVVAVGDQVEKYAPGD 102

Query: 87  ---------------------EVY-----GDINEKALDHPKRN-GSLAEYTAVEENLLAL 119
                                E Y     G  N    D P    G  ++   V E    L
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VL 161

Query: 120 K-PKNLSFVEAASLPL--ATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG 176
           +       + A + PL  A  T Y  L       GK + V+G  GG+G M I+LA    G
Sbjct: 162 RIRHPQEQLAAVA-PLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAH-AMG 218

Query: 177 ASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDLPEKFDVVFDAV 222
           A  VA T+S AK +  ++LGAD  ++    + +    + FD + + V
Sbjct: 219 AHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTV 265

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 76.0 bits (188), Expect = 7e-16
 Identities = 56/303 (18%), Positives = 108/303 (35%), Gaps = 63/303 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           + A V    G   +  + +  +++   + D+VL+KVVA  +   D       +     PL
Sbjct: 7   IIAAVTPCKG---ADFELQA-LKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PL 59

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------------YGDINEKAL 97
           P + G++ +G++E +G  V + +VGD V                       +   N    
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 98  --DHPKR---------------NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
             +                     S A Y    EN      K++       L    +T  
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGA 179

Query: 141 EG--LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGA 197
            G  +     +   S +   GAG VG   +  AK   GAS  +A     ++L+L + LGA
Sbjct: 180 -GACINALKVTPASSFVTW-GAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGA 236

Query: 198 DLAIDYTKENI-EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPA 249
              I+   ++    + E      +   ++ G  +   + + A+   G++  ++G      
Sbjct: 237 THVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIA-VVG-APQLG 294

Query: 250 SSF 252
           ++ 
Sbjct: 295 TTA 297

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 55/269 (20%), Positives = 91/269 (33%), Gaps = 52/269 (19%)

Query: 2   KAWVYKEYGNSQSVLKFET----NVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSAT 56
           +  V             E      V +P  + E QV ++ +  +++P    RM       
Sbjct: 10  QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 69

Query: 57  DSPLP-----TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTA 111
               P      + G  +  + E   S+      GD V                       
Sbjct: 70  YIT-PWQLSQVVDGGGIGIIEE---SKHTNLTKGDFVTS-----------FYWPWQTKVI 114

Query: 112 VEENLLALKPKNLSFVEAASLPLATE---------TAYEGLERSA-FSAGKS--ILVLGG 159
           ++ N L      L         L+           T+  G++     +AG +  ++V G 
Sbjct: 115 LDGNSLEKVDPQL-----VDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGA 169

Query: 160 AGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRS-LGADLAIDYTKENIED-----LP 212
           AG  G++  Q+     G S+V     +  K  LL S LG D AI+Y K+N+ +      P
Sbjct: 170 AGACGSVAGQIGH-FLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCP 228

Query: 213 EKFDVVFDAVG--QCDKALKAVKEGGRVV 239
              DV FD VG    D  +  + E   ++
Sbjct: 229 AGVDVYFDNVGGNISDTVISQMNENSHII 257

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 64/291 (21%), Positives = 101/291 (34%), Gaps = 65/291 (22%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75
           L  ET + V   +  +V IK++A+ +   D   +     +     P I G++  GVVE +
Sbjct: 22  LSLET-ITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS---KFPVILGHEAVGVVESI 77

Query: 76  GSQVKKFKVGDEV---------------------------------YGD------INEKA 96
           G+ V   K GD+V                                   D         K 
Sbjct: 78  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 137

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---- 152
           + +     +  EYT V +  +A         E+  +     T Y G   +A +  K    
Sbjct: 138 IYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATGY-G---AAVNTAKVTPG 192

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENI 208
           S   + G GGVG   I   K   GAS+ +   +   K      LGA   +   DY K   
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIY 251

Query: 209 EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSF 252
           E + EK     D   +  G+ +    AL++   G  V  ++G +  P    
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLG-LASPNERL 301

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 70/285 (24%), Positives = 104/285 (36%), Gaps = 63/285 (22%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           VEV   +  +V IK+VA  +   D   + G       PLP I G++ AG+VE +G  V  
Sbjct: 26  VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGEGVTT 82

Query: 82  FKVGDEV---------------------------------YGD------INEKALDHPKR 102
            + GD+V                                   D         K + H   
Sbjct: 83  VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLG 142

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK----SILVLG 158
             + ++YT V+E  +A         +   +     T Y G   SA    K    S   + 
Sbjct: 143 TSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGY-G---SAVKVAKVTQGSTCAVF 198

Query: 159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK 214
           G GGVG  VI   K   GA++ +    +  K    + +GA   +   DY K   E L E 
Sbjct: 199 GLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 257

Query: 215 ----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSF 252
                D  F+ +G+ D    AL   +E   V  I+G V P + + 
Sbjct: 258 SNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG-VPPDSQNL 301

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 64/310 (20%), Positives = 103/310 (33%), Gaps = 71/310 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA +  + G+    L  E  +EV   +  +V I+V+A  + P D         A     
Sbjct: 9   CKAAIAWKTGSP---LCIEE-IEVSPPKACEVRIQVIATCVCPTDINATDPKKKA---LF 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P + G++ AG+VE VG  V  FK GD+V                                
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 89  -----YGD------INEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                  D         +++ H     S ++YT V E  LA      +      +     
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181

Query: 138 TAYEGLERSAFSAGK----SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLL 192
           + Y G   +A +  K    S   + G G VG   I   K   GAS+ +A   +  K    
Sbjct: 182 SGY-G---AAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKA 236

Query: 193 RSLGADLAI---DYTKENIEDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSII 242
           ++LGA   +   +  K   + + E      D   D  G       A+     G    +++
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 243 GSVTPPASSF 252
           G       + 
Sbjct: 297 G-AKVDEMTI 305

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 72/293 (24%), Positives = 104/293 (35%), Gaps = 63/293 (21%)

Query: 16  LKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKV 75
           L  E  +EV   +  +V IK++A A+   D   + GA    +   P I G+  AG+VE V
Sbjct: 19  LSIEE-IEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLGAGIVESV 75

Query: 76  GSQVKKFKVGDEV---------------------------------YGD------INEKA 96
           G  V K K GD V                                   D         K 
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 97  LDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK---- 152
           + H     + +EYT V +  +A         +   L     T Y G   +A +  K    
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY-G---AAVNTAKLEPG 191

Query: 153 SILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENI 208
           S+  + G GGVG  VI   K   GAS+ +    +  K    +  GA   I   D++K   
Sbjct: 192 SVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQ 250

Query: 209 EDLPEK----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPASSFVL 254
           E L E      D  F+ +G       AL+A  +G  V  ++G V         
Sbjct: 251 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG-VAASGEEIAT 302

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 70.7 bits (174), Expect = 5e-14
 Identities = 49/283 (17%), Positives = 95/283 (33%), Gaps = 62/283 (21%)

Query: 22  VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK 81
           +EV     +++ IK++A  +   D   +           P + G++ AG+VE VG  V +
Sbjct: 26  IEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVESVGPGVTE 83

Query: 82  FKVGDEV---------------------------------YGD------INEKALDHPKR 102
           F+ G++V                                             + +     
Sbjct: 84  FQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLG 143

Query: 103 NGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGK----SILVLG 158
             + ++YT V +  +A    +        L     T + G   +A +  K    S   + 
Sbjct: 144 TSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGF-G---AAVNTAKVEPGSTCAVF 199

Query: 159 GAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAI---DYTKENIEDLPEK 214
           G G VG   +       GA + +A   +  K +  +  GA   +   D+++   + L + 
Sbjct: 200 GLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKM 258

Query: 215 ----FDVVFDAVGQCD---KALKAVKEGGRVVSIIGSVTPPAS 250
                D   + VG       AL++  +G  V  ++G  T    
Sbjct: 259 TNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVG-WTDLHD 300

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 68.7 bits (169), Expect = 2e-13
 Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 33/196 (16%)

Query: 57  DSPLPTIPGYDVAGVVEKVGSQV-KKFKVGD---------------------EVY----- 89
           +  +P + G+++ G V K+G +     KVG                      E Y     
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 90  GDINEKALDHPKRNGSLAEYTAVEENLLALK-PKNLSFVEAASLPLATETAYEGLERSAF 148
              ++   D     G  A Y  V E+   +  P+N+    AA L     T Y  L R+  
Sbjct: 119 TTYSQPYEDGYVSQGGYANYVRVHEHF-VVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC 177

Query: 149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKE 206
             GK + ++G  GG+G+M   ++K   GA     + S+ K +    +GAD  +A     +
Sbjct: 178 GPGKKVGIVG-LGGIGSMGTLISK-AMGAETYVISRSSRKREDAMKMGADHYIATLEEGD 235

Query: 207 NIEDLPEKFDVVFDAV 222
             E   + FD++    
Sbjct: 236 WGEKYFDTFDLIVVCA 251

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 65/321 (20%), Positives = 98/321 (30%), Gaps = 102/321 (31%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRED------QVLIKVVAAA-----LNPIDFKRM 49
            K+ VY    +    L+ ET V  P L  +       V++KVV+        +       
Sbjct: 3   NKSVVYHGTRD----LRVET-VPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR---- 53

Query: 50  LGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-----------------YGDI 92
                    P   + G+++ G V + GS V+   +GD V                   D+
Sbjct: 54  ----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDV 109

Query: 93  NEKALDHPKRNGSL------------AEYTAV---EENLLALKPKNLSFVEAAS------ 131
            E  L +P  +               AEY  V   +  LL         +E         
Sbjct: 110 CENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKF-GDKEQAMEKIKDLTLIS 168

Query: 132 --LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK- 188
             LP    T + G   +    G  + +  GAG VG      A+   GA+ V       + 
Sbjct: 169 DILP----TGFHGCVSAGVKPGSHVYIA-GAGPVGRCAAAGARL-LGAACVIVGDQNPER 222

Query: 189 LDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVG-QCDK----------- 227
           L LL   G +  ID        L ++          D   DAVG +              
Sbjct: 223 LKLLSDAGFE-TIDLRNS--APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPN 279

Query: 228 -----ALKAVKEGGRVVSIIG 243
                    V+ GG  + I G
Sbjct: 280 GALNSLFDVVRAGGA-IGIPG 299

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 57/323 (17%), Positives = 101/323 (31%), Gaps = 105/323 (32%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLRE-------DQVLIKVVAAA-----LNPIDFKR 48
            +  VY   G     ++ +  ++ P +++         V++KVV+        + +    
Sbjct: 3   NRGVVYLGSGK----VEVQK-IDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR--- 54

Query: 49  MLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------- 88
                  T + +  + G+++ G V + G  V+  ++GD V                    
Sbjct: 55  -----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTG 109

Query: 89  -------------YGDINEKALDHPKRNGSLAEYTAV---EENLLALKPKNLS--FVEAA 130
                        YG ++          G  AEY  V   + NLL L P           
Sbjct: 110 VCLTVNPARAGGAYGYVDMGDWT-----GGQAEYVLVPYADFNLLKL-PDRDKAMEKIRD 163

Query: 131 SLPLA--TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK 188
              L+    T Y G   +    G ++ V  GAG VG      A+   GA+ V        
Sbjct: 164 LTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARL-LGAAVVIVGDLNPA 221

Query: 189 -LDLLRSLGADLAIDYTKENIEDLPEKF---------DVVFDAVG------------QCD 226
            L   ++ G +   D + +    L E+          D   DAVG               
Sbjct: 222 RLAHAKAQGFE-IADLSLD--TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 278

Query: 227 K------ALKAVKEGGRVVSIIG 243
                   ++  +  G+ + I G
Sbjct: 279 PATVLNSLMQVTRVAGK-IGIPG 300

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 7e-08
 Identities = 40/313 (12%), Positives = 83/313 (26%), Gaps = 96/313 (30%)

Query: 4   WVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTI 63
           W          V KF                  V   L   ++K ++             
Sbjct: 69  WTLLSKQEEM-VQKF------------------VEEVLRI-NYKFLMSPIKTE----QRQ 104

Query: 64  PGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAE-YTAVEENLLALKPK 122
           P       +E+           D +Y D N+      K N S  + Y  + + LL L+P 
Sbjct: 105 PSMMTRMYIEQR----------DRLYND-NQV---FAKYNVSRLQPYLKLRQALLELRPA 150

Query: 123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
               ++             G+      +GK+ + L           ++   +F  +    
Sbjct: 151 KNVLID-------------GV----LGSGKTWVALDVCLSYKV-QCKMDFKIFWLNLKNC 192

Query: 183 TSSTAKLDLLRSLGADLAIDYT---------KENIEDLPEKFD------------VVFDA 221
            S    L++L+ L   +  ++T         K  I  +  +              +V   
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 222 VGQCD-KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAIIDPK 280
           V   + KA  A     +++             + T    + + L+    +    ++    
Sbjct: 253 V--QNAKAWNAFNLSCKIL-------------LTTRFKQVTDFLSA--ATTTHISLDHHS 295

Query: 281 GPFPFSQTLEAFS 293
                 +      
Sbjct: 296 MTLTPDEVKSLLL 308

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Length = 243

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 150 AGKSILVLG-GAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKEN 207
            G  I+ LG G G          +H  GAS V     S   L   R+ G D  I Y + +
Sbjct: 43  GGLRIVDLGCGFGWFC---RWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERAD 97

Query: 208 IEDLP---EKFDVVF---------DAVGQCDKALKAVKEGGRVVSII---GSVTPPASSF 252
           ++ L    + FD+ +         D         +A+  GG  V        + P    +
Sbjct: 98  LDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGW 157

Query: 253 VLTSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA 291
            + ++G     ++ Y   G  K     KG     +T+  
Sbjct: 158 AIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGT 196

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 154 ILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIEDL 211
           I + G  G +G  VI  L K V  +  VA   + AK   L + G  +   DY   +   L
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYG--DEAAL 59

Query: 212 PEKF---DVVF--------DAVGQCDKALKAVKEGG--RVV--SIIGSVTPP 248
                  + +             Q    + A K  G   +   S++ + T P
Sbjct: 60  TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSP 111

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Length = 276

 Score = 43.0 bits (101), Expect = 6e-05
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 17/112 (15%)

Query: 143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-- 200
              + +  G  +L  G   G+G   + LAK+   A   +   S   L+  R         
Sbjct: 30  HHDTVYPPGAKVLEAGC--GIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK 87

Query: 201 -IDYTKENIEDLP---EKFDVVFDA-----VGQCDKALK----AVKEGGRVV 239
            + + + NI  LP     FD +F       +   ++ALK     +K GG + 
Sbjct: 88  NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTIT 139

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 21/116 (18%)

Query: 153 SILVLGGAGGVGTMVI-QLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIED 210
           SI V G  G +G +VI  L K V  +  +A   +  K   L   G ++   DY     E 
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYN--QPES 59

Query: 211 LPEKF---DVVF----------DAVGQCDKALKAVKEGG--RVV--SIIGSVTPPA 249
           L + F     +             + Q    +KA ++ G   +       +     
Sbjct: 60  LQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESII 115

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Length = 253

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 21/140 (15%)

Query: 150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLLRSLGADLAIDYTKENI 208
             K++L LG   G G   I  A+H  GA KV     S   L   +       + Y ++ I
Sbjct: 44  NQKTVLDLGC--GFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI 99

Query: 209 EDLP---EKFDVVF--DAVGQC---DKALKAV----KEGGRVVSII---GSVTPPASSFV 253
           ED+    + ++VV    A+      D   K V    K  G  +  +            + 
Sbjct: 100 EDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWY 159

Query: 254 LTSDGSILE-KLNPYFESGK 272
               G+ L   ++ YF    
Sbjct: 160 TDETGNKLHWPVDRYFNESM 179

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 15/111 (13%)

Query: 149 SAGKSILVLGGAGGVGTMVIQ-LAKH-------VFGASKVAATSSTAKLDLLRSLGADLA 200
            +   IL++G  G +G  V +            V  ++  + +     L+  ++ GA++ 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 201 I-DYT-KENIEDLPEKFDVVFDAVGQCD-----KALKAVKEGGRVVSIIGS 244
                   ++ +  +  DVV   VG          +KA+KE G V     S
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 112

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.78
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.8
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.47
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.42
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.33
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.29
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.26
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.25
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.22
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.08
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.06
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.94
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.72
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.7
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.62
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.59
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.59
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.55
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.51
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.47
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.41
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.4
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.29
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.26
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.25
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.25
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.24
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.23
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.16
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.14
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.13
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.11
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.08
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.07
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.06
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.02
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.97
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.91
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.83
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.83
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.79
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.78
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.78
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.77
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.76
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.76
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.7
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.7
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.69
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.69
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.68
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.67
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.66
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.66
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.65
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.65
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.62
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.62
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.61
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.59
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.57
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.57
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.56
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.53
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.53
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.52
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.52
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.5
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.49
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.47
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.45
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.44
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.44
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.42
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.42
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.41
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.41
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.41
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.4
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.39
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.39
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.39
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.39
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.38
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.38
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.37
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.37
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.36
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.35
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.34
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.34
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.33
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.32
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.32
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.32
1xxl_A	239	YCGJ protein; structural genomics, protein structu	96.31
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.3
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.3
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.29
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.28
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.28
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.28
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.25
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.23
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.22
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.22
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.21
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.2
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.2
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.19
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.19
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.19
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.19
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.18
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.18
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.17
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.17
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.17
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.16
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.16
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.16
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.16
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.16
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.16
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.16
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.15
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.15
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.14
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.14
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.14
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.14
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.13
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.13
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.12
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	96.12
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.12
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.11
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.11
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.1
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.09
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.08
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.08
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.08
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.07
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.07
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.07
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.07
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.06
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.06
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.06
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.04
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.04
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.02
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.02
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.01
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.01
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.01
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	95.98
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.98
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.97
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.96
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.96
1spx_A	278	Short-chain reductase family member (5L265); paral	95.96
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	95.95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.94
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.93
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.92
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.9
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.89
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.89
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.88
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.88
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	95.88
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.88
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.88
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.87
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.87
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	95.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	95.86
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.85
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.85
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.85
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.85
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.84
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.84
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.83
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.82
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.82
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.82
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.82
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.82
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.81
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.79
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.79
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	95.79
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.79
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.78
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.77
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.76
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.76
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.75
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.75
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.75
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.75
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.72
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.71
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.71
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.7
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.69
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.69
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.67
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.67
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.66
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.65
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.65
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.64
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.63
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.63
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.63
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.62
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.62
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.62
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.61
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.61
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.6
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.59
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.59
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.59
3i9f_A	170	Putative type 11 methyltransferase; structural gen	95.57
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.56
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.56
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.55
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.55
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.54
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.54
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.53
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.53
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.52
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.52
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.52
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.52
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	95.51
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.51
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.51
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.5
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.5
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.49
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	95.47
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.47
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.47
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.45
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.44
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.43
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.41
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.4
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.4
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.38
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.38
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.38
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.37
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.37
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.36
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.35
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.35
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.34
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.32
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.32
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.32
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.31
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	95.29
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.29
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	95.29
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.28
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.27
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.26
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.23
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.23
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.23
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.23
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.22
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.2
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.19
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.19
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.19
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	95.17
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.16
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.14
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.14
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.12
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.12
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.11
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.04
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.03
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.02
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.0
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.99
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	94.98
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	94.97
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.97
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	94.97
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	94.96
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.95
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	94.94
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	94.94
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	94.93
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.92
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	94.9
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.89
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.87
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	94.87
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	94.86
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.83
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.82
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	94.82
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.82
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	94.8
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	94.8
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	94.79
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.78
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.78
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.77
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	94.74
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	94.74
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	94.73
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.69
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	94.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.67
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.66
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.65
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	94.65
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	94.63
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.63
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.63
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	94.63
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	94.62
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	94.62
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	94.62
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	94.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	94.56
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	94.56
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	94.56
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.55
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	94.52
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.51
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.5
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	94.5
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.49
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	94.48
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	94.48
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	94.44
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.42
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.42
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	94.41
4ezb_A	317	Uncharacterized conserved protein; structural geno	94.41
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.41
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.4
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	94.4
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.37
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	94.36
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	94.35
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.32
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.32
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.31
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	94.3
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.29
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.29
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	94.29
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	94.27
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	94.27
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	94.26
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	94.25
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	94.22
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.2
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	94.2
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	94.2
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.2
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	94.19
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	94.18
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.18
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.17
4had_A	350	Probable oxidoreductase protein; structural genomi	94.17
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	94.16
1xkq_A	280	Short-chain reductase family member (5D234); parra	94.15
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.14
3ege_A	261	Putative methyltransferase from antibiotic biosyn	94.14
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.12
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.08
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	94.07
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	94.06
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	94.06
1xhl_A	297	Short-chain dehydrogenase/reductase family member	94.02
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	94.02
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	94.02
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.0
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	93.99
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	93.97
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	93.97
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	93.96
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	93.95
2p8j_A	209	S-adenosylmethionine-dependent methyltransferase;	93.95
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	93.95
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	93.95
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	93.95
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	93.93
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	93.92
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	93.92
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.89
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	93.87
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	93.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	93.86

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.1e-50  Score=357.35  Aligned_cols=298  Identities=33%  Similarity=0.495  Sum_probs=259.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCC--CCC-CCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA--FSA-TDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~--~~~-~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.  ++. ....+|.++|||++|+|+++|+
T Consensus         7 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~   84 (321)
T 3tqh_A            7 MKAIQFDQFGPP-KVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGS   84 (321)
T ss_dssp             EEEEEESSSCSG-GGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECT
T ss_pred             ceEEEEccCCCc-ceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCC
Confidence            899999999998 889999 99999999999999999999999999999882  110 1346799999999999999999


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEE
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (310)
                      +++++++||||++....     ....|+|+||+++|.+.++++|+++++++||.++++++|||++++.+++++|++|+|+
T Consensus        85 ~v~~~~~GdrV~~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~  159 (321)
T 3tqh_A           85 DVNNVNIGDKVMGIAGF-----PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIH  159 (321)
T ss_dssp             TCCSCCTTCEEEEECST-----TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             CCCCCCCCCEEEEccCC-----CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence            99999999999987521     1236999999999999999999999999999999999999999988999999999999


Q ss_pred             cCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc-ccccCCCccEEEeCCCC--hHHHHhhccc
Q 021628          158 GGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAVGQ--CDKALKAVKE  234 (310)
Q Consensus       158 g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~dvvi~~~g~--~~~~~~~l~~  234 (310)
                      |++|++|++++|+|+.+ |++|++++ ++++++.++++|+++++++.+++ +.+..+++|+||||+|.  ...+++++++
T Consensus       160 Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~~~~~~~~~l~~  237 (321)
T 3tqh_A          160 AGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQSIDCLKE  237 (321)
T ss_dssp             STTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHHHHHHHGGGEEE
T ss_pred             cCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcHHHHHHHHhccC
Confidence            99999999999999996 99988887 55668899999999999988776 66666899999999984  5889999999


Q ss_pred             CCEEEEEeCCCCC--------CceEEEE---ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCcc
Q 021628          235 GGRVVSIIGSVTP--------PASSFVL---TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK  303 (310)
Q Consensus       235 ~G~~v~~g~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k  303 (310)
                      +|+++.+|.....        ....+..   ....+++++++++++++++++.  ++++|+++++++|++.+.+++..||
T Consensus       238 ~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gK  315 (321)
T 3tqh_A          238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIE--ISRIFQLSEAVTAHELLETGHVRGK  315 (321)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSE
T ss_pred             CCEEEEeCCCCchhhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccc--cccEEcHHHHHHHHHHHHcCCCCce
Confidence            9999999765311        1122221   2346789999999999999875  4689999999999999999999999


Q ss_pred             EEEEeC
Q 021628          304 VVIHPI  309 (310)
Q Consensus       304 ~vi~~~  309 (310)
                      ++++++
T Consensus       316 vvl~~~  321 (321)
T 3tqh_A          316 LVFKVR  321 (321)
T ss_dssp             EEEECC
T ss_pred             EEEEeC
Confidence            999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.5e-49  Score=350.55  Aligned_cols=300  Identities=27%  Similarity=0.368  Sum_probs=256.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         3 MkA~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~G~E~~G~V~~vG~~v~   77 (340)
T 3s2e_A            3 MKAAVVRAFGAP---LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV-KPTLPFIPGHEGVGYVSAVGSGVS   77 (340)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSEEEEEEEEECSSCC
T ss_pred             eEEEEEecCCCC---CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC-CCCCCcccCCcceEEEEEECCCCC
Confidence            999999998876   7999 99999999999999999999999999999997642 246899999999999999999999


Q ss_pred             CCCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||.....                   .....+...+|+|+||+++|.+.++++|+++++++||.+++++.|||+
T Consensus        78 ~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  157 (340)
T 3s2e_A           78 RVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYK  157 (340)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHH
Confidence            9999999953211                   011123345799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc----CCCccE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~dv  217 (310)
                      +++..++++|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.++++.+.    ..++|+
T Consensus       158 ~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~  235 (340)
T 3s2e_A          158 GLKVTDTRPGQWVVISG-IGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHG  235 (340)
T ss_dssp             HHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred             HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence            99888999999999999 699999999999996 999999999999999999999999999877654321    238999


Q ss_pred             EEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcc
Q 021628          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGP  282 (310)
Q Consensus       218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (310)
                      +||++|.   ++.++++++++|+++.+|......          ...+..  ....+++++++++++++++++.   ++.
T Consensus       236 vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~  312 (340)
T 3s2e_A          236 VLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKAT---VST  312 (340)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEE
T ss_pred             EEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCce---EEE
Confidence            9999874   588999999999999998654211          111111  2246789999999999999874   468


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      |+++++++|++.+.+++..||++|+++.
T Consensus       313 ~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          313 AKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             ECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             EeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            8999999999999999999999999863

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6.2e-49  Score=350.14  Aligned_cols=299  Identities=24%  Similarity=0.331  Sum_probs=254.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+.++  ..++++ |.|.|+|++|||+|||.+++||++|+++++|.++   .++|.++|||++|+|+++|++++
T Consensus         1 MKA~v~~~~~~--~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~---~~~p~i~GhE~aG~V~~vG~~V~   74 (348)
T 4eez_A            1 MKAAVVRHNPD--GYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG---NKAGTVLGHEGIGIVKEIGADVS   74 (348)
T ss_dssp             CEEEEECSSCC--SSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC---CCTTCBCCSEEEEEEEEECTTCC
T ss_pred             CeEEEEEcCCC--CcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC---CCCCcccceeEEEEEEEECceee
Confidence            99999975433  347899 9999999999999999999999999999999864   46899999999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||+..+..                   ....+...+|+|+||+.+|...++++|+++++++|++++++++|+|+
T Consensus        75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  154 (348)
T 4eez_A           75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK  154 (348)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence            99999999765321                   11123345799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~  215 (310)
                      +++.+++++|++|+|+| +|++|.+++++++.+++++|++++++++|++.++++|+++++++.++++.+.      ..++
T Consensus       155 ~l~~~~~~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~  233 (348)
T 4eez_A          155 AIKVSGVKPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGV  233 (348)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCE
T ss_pred             eecccCCCCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCc
Confidence            99989999999999999 7999999999998766889999999999999999999999999887765331      3479


Q ss_pred             cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc----------eEEE--EecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFV--LTSDGSILEKLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (310)
                      |+++++++.   +..++++++++|+++.+|.......          ..+.  ......+++++++++++|++++.   +
T Consensus       234 d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~---~  310 (348)
T 4eez_A          234 QSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPI---V  310 (348)
T ss_dssp             EEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCC---E
T ss_pred             eEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEE---E
Confidence            999999874   5789999999999999986542211          1111  12246789999999999999864   4


Q ss_pred             cccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          281 GPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++|+++++++|++.+++++..||+||+|+
T Consensus       311 ~~~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          311 ATRKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             EEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             EEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence            78999999999999999999999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.1e-49  Score=347.95  Aligned_cols=293  Identities=31%  Similarity=0.391  Sum_probs=255.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++.  ..+|.++|||++|+|+++|++++
T Consensus         2 MkA~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~p~v~G~e~~G~V~~vG~~v~   77 (325)
T 3jyn_A            2 AKRIQFSTVGGP-EVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA--PFLPSGLGAEGAGVVEAVGDEVT   77 (325)
T ss_dssp             EEEEEBSSCSSG-GGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--SSSSBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEecCCCc-ceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCceeEEEEEEECCCCC
Confidence            999999999998 889999 99999999999999999999999999999998742  46899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                      ++++||+|++..        ...|+|+||+++|.+.++++|+++++++|+.+++.++|+|+++. .+++++|++|+|+|+
T Consensus        78 ~~~~GdrV~~~~--------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  149 (325)
T 3jyn_A           78 RFKVGDRVAYGT--------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA  149 (325)
T ss_dssp             SCCTTCEEEESS--------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEec--------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            999999998864        23699999999999999999999999999999999999999994 689999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|++++++++.. |++|+++++++++++.++++|+++++++.++++.+.      .+++|++|||+|.  ...++++
T Consensus       150 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  228 (325)
T 3jyn_A          150 AGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS  228 (325)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTT
T ss_pred             CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHH
Confidence            999999999999996 999999999999999999999999999876654321      2489999999984  5889999


Q ss_pred             cccCCEEEEEeCCCCCC------------ceEEEEe------cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          232 VKEGGRVVSIIGSVTPP------------ASSFVLT------SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~~------------~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      ++++|+++.+|....+.            .+.+...      ..    .+.++++++++.+|++++.  ++++|++++++
T Consensus       229 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~  306 (325)
T 3jyn_A          229 VAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAA  306 (325)
T ss_dssp             EEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHH
T ss_pred             hcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHH
Confidence            99999999998654211            1111110      01    2335689999999999986  47899999999


Q ss_pred             HHHHHHHcCCCCccEEEEe
Q 021628          290 EAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~~  308 (310)
                      +|++.+.+++..||++|.+
T Consensus       307 ~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          307 KAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999999999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=3.1e-49  Score=350.81  Aligned_cols=296  Identities=21%  Similarity=0.343  Sum_probs=256.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++.+.++++ +.|.|++++|||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         5 mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            5 GKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH-RIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             EEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT-TSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC-CCCCCCcCCcceEEEEEEeCCCCC
Confidence            8999999999865568999 99999999999999999999999999999997642 347899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      ++++||+|+++.         ..|+|+||+++|.+.++++|+++++++||++++.++|||+++ +.+++++|++|+|+|+
T Consensus        83 ~~~vGdrV~~~~---------~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga  153 (340)
T 3gms_A           83 RELIGKRVLPLR---------GEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNAC  153 (340)
T ss_dssp             GGGTTCEEEECS---------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEecC---------CCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCC
Confidence            999999999863         279999999999999999999999999999999999999998 6899999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      .|++|++++++|+.. |++|+++++++++++.++++|+++++++.++++.+.      ..++|++|||+|.  ....+++
T Consensus       154 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~  232 (340)
T 3gms_A          154 GSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS  232 (340)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHT
T ss_pred             ccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHH
Confidence            889999999999996 999999999999999999999999998876654321      2489999999984  4677799


Q ss_pred             cccCCEEEEEeCCCCC----------CceEEEEe------------cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          232 VKEGGRVVSIIGSVTP----------PASSFVLT------------SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~----------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      |+++|+++.+|.....          ..+.+...            ...+.++++++++.+|++++.. ++++|++++++
T Consensus       233 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~  311 (340)
T 3gms_A          233 LRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVK  311 (340)
T ss_dssp             EEEEEEEEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHH
T ss_pred             hcCCCEEEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHH
Confidence            9999999999865421          12222211            0135688999999999998742 46899999999


Q ss_pred             HHHHHHHcCCC-CccEEEEeC
Q 021628          290 EAFSHLESSRA-TGKVVIHPI  309 (310)
Q Consensus       290 ~a~~~~~~~~~-~~k~vi~~~  309 (310)
                      +|++.+.+++. .||+++++.
T Consensus       312 ~A~~~~~~~~~~~GKvvl~~~  332 (340)
T 3gms_A          312 AAVDVVQSAEKTKGKVFLTSY  332 (340)
T ss_dssp             HHHHHHHCTTCCSSEEEEECC
T ss_pred             HHHHHHHhcCCCCCeEEEEEe
Confidence            99999999884 599999875

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=5.9e-49  Score=351.86  Aligned_cols=299  Identities=30%  Similarity=0.416  Sum_probs=254.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++ + +.++++ +.|.|++++|||+|||.+++||++|++++.|.++. ...+|.++|||++|+|+++|++++
T Consensus        28 mkA~~~~~~~-~-~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           28 MQEWSTETVA-P-HDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL-DLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             EEEEEBSCTT-T-TCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC-CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             hEEEEEccCC-C-CCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCCcCcccceEEEEEEECCCCC
Confidence            8999999873 3 457999 99999999999999999999999999999987642 357899999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc---------------CCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-H
Q 021628           81 KFKVGDEVYGDINEKAL---------------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-E  144 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~---------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~  144 (310)
                      ++++||||++.+...+.               .+...+|+|+||+++|.+.++++|+++++++||.++++++|||+++ +
T Consensus       104 ~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~  183 (363)
T 3uog_A          104 RFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVE  183 (363)
T ss_dssp             SCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTT
T ss_pred             CCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHH
Confidence            99999999987421110               2223569999999999999999999999999999999999999999 6


Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvv  218 (310)
                      .+++++|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++++|++++++...+++.+.      .+++|+|
T Consensus       184 ~~~~~~g~~VlV~G-~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          184 KGHLRAGDRVVVQG-TGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             TTCCCTTCEEEEES-SBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence            89999999999999 999999999999996 999999999999999999999999998543443321      3489999


Q ss_pred             EeCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCccc
Q 021628          219 FDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPF  283 (310)
Q Consensus       219 i~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (310)
                      |||+|.  +..++++++++|+++.+|.....           ....+..  ....++++++++++.++++++.  ++++|
T Consensus       262 id~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~  339 (363)
T 3uog_A          262 LEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPV--IDMRY  339 (363)
T ss_dssp             EEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHTCCCC--EEEEE
T ss_pred             EECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCCCccc--eeeEE
Confidence            999983  68999999999999999865421           1112221  1246789999999999998764  35899


Q ss_pred             chhhHHHHHHHHHcCCCCccEEEEe
Q 021628          284 PFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +++++++|++.+.+++ .||++|++
T Consensus       340 ~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          340 KFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             EGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cHHHHHHHHHHHHcCC-CccEEEeC
Confidence            9999999999999998 89999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=5.8e-49  Score=349.79  Aligned_cols=298  Identities=28%  Similarity=0.342  Sum_probs=253.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++   ++++ +.|.|++++|||+||+.+++||++|++.++|.++..+..+|.++|||++|+|+++|++++
T Consensus         1 MkA~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   76 (345)
T 3jv7_A            1 MKAVQYTEIGSE---PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVT   76 (345)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCc---eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCC
Confidence            999999999985   6899 999999999999999999999999999999976544467899999999999999999999


Q ss_pred             CCCCCCeeEeecCccc-------------------c----CCCCCCCcceeEEEEe-cCccccCCCCCChhhhccccchH
Q 021628           81 KFKVGDEVYGDINEKA-------------------L----DHPKRNGSLAEYTAVE-ENLLALKPKNLSFVEAASLPLAT  136 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~-------------------~----~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~  136 (310)
                      ++++||+|++.+....                   .    .+....|+|+||+++| ...++++|+ +++++||.+++++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           77 GFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             SCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            9999999988542100                   0    1233579999999999 899999999 9999999999999


Q ss_pred             HHHHHHHHhc--ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----
Q 021628          137 ETAYEGLERS--AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----  210 (310)
Q Consensus       137 ~ta~~al~~~--~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----  210 (310)
                      +|||+++...  .+++|++|+|+| +|++|++++|+|+.+++++|++++++++|++.++++|+++++++++ ++.+    
T Consensus       156 ~ta~~~l~~~~~~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~  233 (345)
T 3jv7_A          156 LTPYHAISRVLPLLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRE  233 (345)
T ss_dssp             HHHHHHHHTTGGGCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence            9999999654  899999999999 5999999999999965689999999999999999999999998765 3221    


Q ss_pred             c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC-CC---------ceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628          211 L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT-PP---------ASSFVL--TSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       211 ~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~-~~---------~~~~~~--~~~~~~~~~~~~~~~~~~~  273 (310)
                      .  .+++|+|||++|.   ++.++++++++|+++.+|.... ..         ...+..  ....+++++++++++++++
T Consensus       234 ~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  313 (345)
T 3jv7_A          234 LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRL  313 (345)
T ss_dssp             HHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCC
Confidence            1  2389999999985   4799999999999999986542 11         111111  1235789999999999999


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++.   +++|+++++++|++.+.+++..||+||++
T Consensus       314 ~~~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          314 DIH---TETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCC---EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             ceE---EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            873   48999999999999999999999999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5.2e-49  Score=350.94  Aligned_cols=293  Identities=27%  Similarity=0.447  Sum_probs=256.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|.+ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. +..+|.++|||++|+|+++|++++
T Consensus        29 MkA~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~vG~~v~  105 (353)
T 4dup_A           29 MRFVDLKSFGGP-DVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP-PKDASPILGLELSGEIVGVGPGVS  105 (353)
T ss_dssp             EEEEEESSSSSG-GGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC-CTTSCSSSCCEEEEEEEEECTTCC
T ss_pred             eeEEEEccCCCc-cceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCccccccEEEEEEECCCCC
Confidence            899999999988 889999 99999999999999999999999999999998752 345789999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      ++++||||++...         .|+|+||+++|.+.++++|+++++++||.++++++|||+++ +.+++++|++|+|+|+
T Consensus       106 ~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg  176 (353)
T 4dup_A          106 GYAVGDKVCGLAN---------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGG  176 (353)
T ss_dssp             SCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESST
T ss_pred             CCCCCCEEEEecC---------CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753         69999999999999999999999999999999999999999 6899999999999988


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc-----CCCccEEEeCCCC--hHHHHhhc
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      +|++|++++++++.. |++|+++++++++++.++++|++.++++.++++.+.     .+++|++|||+|.  ...+++++
T Consensus       177 ~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l  255 (353)
T 4dup_A          177 TSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFERNIASL  255 (353)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGGGHHHHHHTE
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHHHHHHHHHHh
Confidence            999999999999996 999999999999999999999999998876654321     4589999999984  58899999


Q ss_pred             ccCCEEEEEeCCCCCCc------------eEEEEec--C--H--------HHHHHHHHHHHcCCeeEEecCCcccchhhH
Q 021628          233 KEGGRVVSIIGSVTPPA------------SSFVLTS--D--G--------SILEKLNPYFESGKVKAIIDPKGPFPFSQT  288 (310)
Q Consensus       233 ~~~G~~v~~g~~~~~~~------------~~~~~~~--~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (310)
                      +++|+++.+|.......            ..+....  .  .        ..+++++++++++++++.  ++++|+++++
T Consensus       256 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~  333 (353)
T 4dup_A          256 AKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPV--IHKVFAFEDV  333 (353)
T ss_dssp             EEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCC--EEEEEEGGGH
T ss_pred             ccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCC--cceEEeHHHH
Confidence            99999999986542211            1111111  0  1        127789999999999864  3689999999


Q ss_pred             HHHHHHHHcCCCCccEEEEe
Q 021628          289 LEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       289 ~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++|++.+.+++..||++|++
T Consensus       334 ~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          334 ADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999975

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.7e-49  Score=351.27  Aligned_cols=299  Identities=24%  Similarity=0.261  Sum_probs=253.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHH-HHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.+++++    +++ +.|.|++++|||+|||.+++||++|++ ++.|.++   ..+|.++|||++|+|+++|+++
T Consensus         1 MkA~~~~~~~~~----~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~p~v~G~E~~G~V~~vG~~v   72 (352)
T 3fpc_A            1 MKGFAMLSIGKV----GWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEV   72 (352)
T ss_dssp             CEEEEEEETTEE----EEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC---CCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEccCCCc----eEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC---CCCCcccCCcceEEEEEECCCC
Confidence            999999999986    888 999999999999999999999999999 5677653   4679999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc---------------------ccCCCCCCCcceeEEEEecC--ccccCCCCCChhhhccccchH
Q 021628           80 KKFKVGDEVYGDINEK---------------------ALDHPKRNGSLAEYTAVEEN--LLALKPKNLSFVEAASLPLAT  136 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  136 (310)
                      +++++||||++.+...                     +..+...+|+|+||+++|..  .++++|+++++++|+.+++++
T Consensus        73 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~  152 (352)
T 3fpc_A           73 KDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMM  152 (352)
T ss_dssp             CSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHH
T ss_pred             CcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchh
Confidence            9999999998743110                     01122357999999999976  899999999999999999999


Q ss_pred             HHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccccc----
Q 021628          137 ETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----  211 (310)
Q Consensus       137 ~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----  211 (310)
                      .|||++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|++++++++++++.+.    
T Consensus       153 ~ta~~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~  230 (352)
T 3fpc_A          153 TTGFHGAELANIKLGDTVCVIG-IGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA  230 (352)
T ss_dssp             HHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH
Confidence            9999999999999999999999 799999999999996 98 8999999999999999999999998876654321    


Q ss_pred             --CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce--------------EEEEec---CHHHHHHHHHHHH
Q 021628          212 --PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS--------------SFVLTS---DGSILEKLNPYFE  269 (310)
Q Consensus       212 --~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~--------------~~~~~~---~~~~~~~~~~~~~  269 (310)
                        .+++|+|||++|.   ++.++++|+++|+++.+|.......+              .+....   ...++++++++++
T Consensus       231 t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~  310 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVF  310 (352)
T ss_dssp             TTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHH
Confidence              2479999999984   58999999999999999865422111              111111   1467999999999


Q ss_pred             cCCeeEEecCCcccc-hhhHHHHHHHHHcCCC-CccEEEEeC
Q 021628          270 SGKVKAIIDPKGPFP-FSQTLEAFSHLESSRA-TGKVVIHPI  309 (310)
Q Consensus       270 ~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~-~~k~vi~~~  309 (310)
                      ++++++...++++|+ ++++++|++.+.+++. .+|++|+++
T Consensus       311 ~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          311 YKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             TTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             cCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            999998656678999 9999999999988664 489999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=9.9e-49  Score=346.81  Aligned_cols=292  Identities=28%  Similarity=0.368  Sum_probs=255.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         9 mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~P~i~G~e~~G~V~~vG~~v~   83 (334)
T 3qwb_A            9 QKVILIDEIGGY-DVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP---CEKPYVLGREASGTVVAKGKGVT   83 (334)
T ss_dssp             EEEEEESSSSSG-GGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC---CCSSEECCSEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCC-ceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC---CCCCCccccceEEEEEEECCCCC
Confidence            899999999987 889999 9999999999999999999999999999999764   45799999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEe-cCccccCCCCCChhh---hccccchHHHHHHHHH-hcccCCCCEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVE-ENLLALKPKNLSFVE---AASLPLATETAYEGLE-RSAFSAGKSIL  155 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~---aa~~~~~~~ta~~al~-~~~~~~g~~vl  155 (310)
                      ++++||||++..          .|+|++|++++ .+.++++|+++++++   ++.+++.++|||+++. ..++++|++|+
T Consensus        84 ~~~~GdrV~~~~----------~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  153 (334)
T 3qwb_A           84 NFEVGDQVAYIS----------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVL  153 (334)
T ss_dssp             SCCTTCEEEEEC----------SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             CCCCCCEEEEee----------CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEE
Confidence            999999999864          59999999999 999999999999999   8888899999999995 67999999999


Q ss_pred             EEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHH
Q 021628          156 VLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDK  227 (310)
Q Consensus       156 I~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~  227 (310)
                      |+|++|++|++++|+++.. |++|+++++++++++.++++|+++++++.++++.+.      ..++|++|||+|.  .+.
T Consensus       154 V~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~  232 (334)
T 3qwb_A          154 LFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEI  232 (334)
T ss_dssp             ESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHH
T ss_pred             EECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHH
Confidence            9999999999999999996 999999999999999999999999999876654321      3479999999984  588


Q ss_pred             HHhhcccCCEEEEEeCCCCC-----------CceEEEEe------cCH----HHHHHHHHHHHcCCeeEEecCCcccchh
Q 021628          228 ALKAVKEGGRVVSIIGSVTP-----------PASSFVLT------SDG----SILEKLNPYFESGKVKAIIDPKGPFPFS  286 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (310)
                      ++++++++|+++.+|.....           ..+.+...      ...    +.++++++++.+|++++.  ++++|+++
T Consensus       233 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~  310 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLR  310 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGG
T ss_pred             HHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHH
Confidence            99999999999999865311           11222210      012    235789999999999875  46899999


Q ss_pred             hHHHHHHHHHcCCCCccEEEEeCC
Q 021628          287 QTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       287 ~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      ++++|++.+.+++..||++|++.+
T Consensus       311 ~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          311 DYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             GHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHHhCCCceEEEEecCC
Confidence            999999999999999999999863

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=2e-48  Score=345.75  Aligned_cols=290  Identities=28%  Similarity=0.395  Sum_probs=249.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++ ....+|.++|||++|+|+++|++++
T Consensus        22 MkA~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~p~v~G~E~~G~V~~vG~~v~   98 (342)
T 4eye_A           22 MKAIQAQSLSGP-EGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ-LKMEPPFVPGIETAGVVRSAPEGSG   98 (342)
T ss_dssp             EEEEEECSSSGG-GGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS-SCCCSSBCCCSEEEEEEEECCTTSS
T ss_pred             eEEEEEecCCCC-ceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC-CCCCCCCccceeEEEEEEEECCCCC
Confidence            899999999988 889999 9999999999999999999999999999999764 2346899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                       +++||||+++..         .|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.+++++|++|+|+|+
T Consensus        99 -~~vGDrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  168 (342)
T 4eye_A           99 -IKPGDRVMAFNF---------IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGA  168 (342)
T ss_dssp             -CCTTCEEEEECS---------SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             -CCCCCEEEEecC---------CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence             999999998743         69999999999999999999999999999999999999999 6899999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|++++++|+.+ |++|+++++++++++.++++|++.++++. +++.+.      .+++|++|||+|.  ...++++
T Consensus       169 sg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~  246 (342)
T 4eye_A          169 AGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRT  246 (342)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHT
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHh
Confidence            899999999999996 99999999999999999999999998877 443321      2379999999984  6899999


Q ss_pred             cccCCEEEEEeCCCCC-----------CceEEEEec-----------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHH
Q 021628          232 VKEGGRVVSIIGSVTP-----------PASSFVLTS-----------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTL  289 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-----------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (310)
                      ++++|+++.+|.....           ....+....           ..+.+++++++++++ +++.  ++++|++++++
T Consensus       247 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~--i~~~~~l~~~~  323 (342)
T 4eye_A          247 LASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPP--VSARIPLSEGR  323 (342)
T ss_dssp             EEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCC--EEEEEEGGGHH
T ss_pred             hcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCC--cceEEeHHHHH
Confidence            9999999999854311           112222211           024588899999999 7664  36899999999


Q ss_pred             HHHHHHHcCCCCccEEEEe
Q 021628          290 EAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       290 ~a~~~~~~~~~~~k~vi~~  308 (310)
                      +|++.+.+++..||++|++
T Consensus       324 ~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          324 QALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            9999999999999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.6e-48  Score=347.21  Aligned_cols=294  Identities=20%  Similarity=0.234  Sum_probs=250.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         5 mka~~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~E~~G~V~~vG~~v~   78 (348)
T 3two_A            5 SKGFAIFSKDEH---FKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK--EGIYPMIPGHEIAGIIKEVGKGVK   78 (348)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSS--CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCC--CCCCCeecCcceeEEEEEECCCCC
Confidence            899999998865   7999 9999999999999999999999999999999864  356899999999999999999999


Q ss_pred             CCCCCCeeEeecCc---------------------ccc-------CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           81 KFKVGDEVYGDINE---------------------KAL-------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~---------------------~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                      ++++||+|++.+..                     ...       .+....|+|+||+++|.+.++++|+++++++||.+
T Consensus        79 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  158 (348)
T 3two_A           79 KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPL  158 (348)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGG
T ss_pred             CCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhh
Confidence            99999999763210                     000       01122399999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccC
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLP  212 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  212 (310)
                      ++++.|||++++..++++|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++++|+++++ .+.+   ...
T Consensus       159 ~~~~~ta~~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~---~~~  232 (348)
T 3two_A          159 LCAGITTYSPLKFSKVTKGTKVGVAG-FGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMGVKHFY-TDPK---QCK  232 (348)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTTCSEEE-SSGG---GCC
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcCCCeec-CCHH---HHh
Confidence            99999999999888999999999999 599999999999996 99999999999999999999999988 3322   223


Q ss_pred             CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-CCCc-e-----------EEEE--ecCHHHHHHHHHHHHcCCee
Q 021628          213 EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPPA-S-----------SFVL--TSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       213 ~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~~-~-----------~~~~--~~~~~~~~~~~~~~~~~~~~  274 (310)
                      +++|+|||++|.   ++.++++++++|+++.+|... .... +           .+..  .....+++++++++++++++
T Consensus       233 ~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  312 (348)
T 3two_A          233 EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIY  312 (348)
T ss_dssp             SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCC
T ss_pred             cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCC
Confidence            399999999983   589999999999999998654 2211 1           1111  12357799999999999998


Q ss_pred             EEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          275 AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       275 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +.   +++|+++++++|++.+.+++..||++|+++
T Consensus       313 ~~---~~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          313 PE---IDLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             CC---EEEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             ce---EEEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            74   379999999999999999999999999875

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.8e-48  Score=350.60  Aligned_cols=300  Identities=21%  Similarity=0.279  Sum_probs=253.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         9 mkA~v~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            9 CKAAVAYEPNKP---LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCc---cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC--CCCCCccCCccceEEEEEeCCCCC
Confidence            899999999985   6999 9999999999999999999999999999999763  356899999999999999999999


Q ss_pred             CCCCCCeeEeecCcc------------------------c---cC-------------CCCCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINEK------------------------A---LD-------------HPKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------------~---~~-------------~~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      ++++||||++.+...                        +   .+             .....|+|+||+++|...++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  162 (378)
T 3uko_A           83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKI  162 (378)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEEC
Confidence            999999998764310                        0   00             0112379999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      |+++++++||.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|++
T Consensus       163 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  240 (378)
T 3uko_A          163 DPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFG-LGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAKKFGVN  240 (378)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEEC-CSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHHTTTCC
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999998 678999999999999 599999999999997 98 799999999999999999999


Q ss_pred             EEeeCC--CCcccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEec
Q 021628          199 LAIDYT--KENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLTS  256 (310)
Q Consensus       199 ~~~~~~--~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~~  256 (310)
                      +++++.  ++++.+     ..+++|+||||+|.   ++.++++++++ |+++.+|.......+           .+....
T Consensus       241 ~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~  320 (378)
T 3uko_A          241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA  320 (378)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             EEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEE
Confidence            999876  333322     12489999999985   47899999996 999999865422211           111111


Q ss_pred             -----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          257 -----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       257 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                           ..+++.++++++.++++++...++++|+++++++|++.+.+++.. |++|+++
T Consensus       321 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~  377 (378)
T 3uko_A          321 FGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTS  377 (378)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETT
T ss_pred             ecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecC
Confidence                 246789999999999998765667999999999999999888876 9999886

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.6e-48  Score=347.46  Aligned_cols=299  Identities=30%  Similarity=0.449  Sum_probs=252.1

Q ss_pred             CEEEEEccc---CCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEY---GNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~---g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |||+++.++   +++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|+
T Consensus        23 MkA~~~~~~~~~~~~-~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           23 MKAVGYNKPAPITDD-ASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPP--DGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             EEEEEBSSCCCTTST-TSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEEEECT
T ss_pred             eEEEEEeccCCCCCC-ceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCC--CCCCCCcccceeEEEEEEeCC
Confidence            899999988   555 678999 9999999999999999999999999999999764  246899999999999999999


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccC-----CC
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS-----AG  151 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~-----~g  151 (310)
                      +++++++||||++...      ....|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.++++     +|
T Consensus        99 ~v~~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g  172 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGS------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAA  172 (363)
T ss_dssp             TCCSCCTTCEEEECCC------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSE
T ss_pred             CCCCCCCCCEEEEccC------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCC
Confidence            9999999999998531      23479999999999999999999999999999999999999999 578888     89


Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc---c-cCCCccEEEeCCCC---
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE---D-LPEKFDVVFDAVGQ---  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-~~~~~dvvi~~~g~---  224 (310)
                      ++|+|+|++|++|++++|+|+.+.|++|++++++++|++.++++|+++++++.++...   + ..+++|+||||+|.   
T Consensus       173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~  252 (363)
T 4dvj_A          173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKH  252 (363)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhh
Confidence            9999999999999999999998558899999999999999999999999987642211   1 13489999999984   


Q ss_pred             hHHHHhhcccCCEEEEEeCCCC-------CCceEEEEec----------C----HHHHHHHHHHHHcCCeeEEecCC-cc
Q 021628          225 CDKALKAVKEGGRVVSIIGSVT-------PPASSFVLTS----------D----GSILEKLNPYFESGKVKAIIDPK-GP  282 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~~~~~~-~~  282 (310)
                      ++.++++++++|+++.++....       .....+....          .    .+.++++++++++|++++.+..+ +.
T Consensus       253 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~  332 (363)
T 4dvj_A          253 AAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSP  332 (363)
T ss_dssp             HHHHHHHSCTTCEEEECSCCSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECS
T ss_pred             HHHHHHHhcCCCEEEEECCCCccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecC
Confidence            4789999999999999975421       1122332211          0    35688999999999998754321 25


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      |+++++++|++.+.+++..||++|++.
T Consensus       333 ~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          333 INAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             CSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             CCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            599999999999999999999999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.7e-48  Score=345.83  Aligned_cols=292  Identities=26%  Similarity=0.386  Sum_probs=244.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         4 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            4 MRAVVLAGFGGL-NKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN-PPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             EEEEEECSSSSG-GGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             eEEEEEccCCCc-ceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC-CCCCCccccceeEEEEEEeCCCCC
Confidence            899999999987 779999 99999999999999999999999999999998642 357899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      ++++||||+++..         .|+|++|+++|.+.++++|+++++++||.++++++|||+++ +.+++++|++|+|+|+
T Consensus        81 ~~~~GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  151 (349)
T 4a27_A           81 GYEIGDRVMAFVN---------YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSA  151 (349)
T ss_dssp             SCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEecC---------CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence            9999999998753         69999999999999999999999999999999999999999 6789999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHHhhc
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      +|++|++++|+|+.+++.+|++++ ++++++.++ +|++++++ .++++.+     ..+++|+||||+|.  ...+++++
T Consensus       152 ~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l  228 (349)
T 4a27_A          152 GGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLL  228 (349)
T ss_dssp             TSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTE
T ss_pred             CcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHh
Confidence            899999999999986345677666 667888888 99999988 5444322     23589999999983  57899999


Q ss_pred             ccCCEEEEEeCCCCCC---------------------------ceEEEEec-------------CHHHHHHHHHHHHcCC
Q 021628          233 KEGGRVVSIIGSVTPP---------------------------ASSFVLTS-------------DGSILEKLNPYFESGK  272 (310)
Q Consensus       233 ~~~G~~v~~g~~~~~~---------------------------~~~~~~~~-------------~~~~~~~~~~~~~~~~  272 (310)
                      +++|+++.+|......                           ...+....             ..+.++++++++++|+
T Consensus       229 ~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  308 (349)
T 4a27_A          229 KPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKK  308 (349)
T ss_dssp             EEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTS
T ss_pred             hcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCC
Confidence            9999999998642100                           00111110             0466889999999999


Q ss_pred             eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +++.  ++++|+++++++|++.+.+++..||++|+++
T Consensus       309 l~~~--i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          309 IKPV--VDSLWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             CCCC--EEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             cccc--ccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            9865  3589999999999999999999999999886

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.6e-48  Score=342.71  Aligned_cols=286  Identities=26%  Similarity=0.439  Sum_probs=240.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+  .+ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         5 Mka~~~~~--~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~   78 (315)
T 3goh_A            5 HQVWAYQT--KT-HSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPI--NWSNGHVPGVDGAGVIVKVGAKVD   78 (315)
T ss_dssp             EEEEEEET--TT-TEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT--CCCTTCCCCSEEEEEEEEECTTSC
T ss_pred             eEEEEEeC--CC-CeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC--cCCCCCEeeeeeEEEEEEeCCCCC
Confidence            89999996  22 447999 9999999999999999999999999999999764  347899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~  160 (310)
                      ++++||||++...      ....|+|+||+++|.+.++++|+++++++||+++++++|||++++.+++++|++|+|+|+ 
T Consensus        79 ~~~vGdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-  151 (315)
T 3goh_A           79 SKMLGRRVAYHTS------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-  151 (315)
T ss_dssp             GGGTTCEEEEECC------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-
T ss_pred             CCCCCCEEEEeCC------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-
Confidence            9999999998752      234799999999999999999999999999999999999999998899999999999997 


Q ss_pred             cchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hHHHHhhcccCCEE
Q 021628          161 GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRV  238 (310)
Q Consensus       161 g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~  238 (310)
                      |++|++++|+|+.+ |++|++++ +++|++.++++|++++++  +  .....+++|++|||+|.  ...++++++++|++
T Consensus       152 G~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d--~~~v~~g~Dvv~d~~g~~~~~~~~~~l~~~G~~  225 (315)
T 3goh_A          152 GAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHLYR--E--PSQVTQKYFAIFDAVNSQNAAALVPSLKANGHI  225 (315)
T ss_dssp             SHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEEES--S--GGGCCSCEEEEECC-------TTGGGEEEEEEE
T ss_pred             CHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEEEc--C--HHHhCCCccEEEECCCchhHHHHHHHhcCCCEE
Confidence            99999999999996 99999999 999999999999999884  2  33346799999999984  47889999999999


Q ss_pred             EEEeCCCCCC-------ceEEE-Eec-------CH-------HHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHH
Q 021628          239 VSIIGSVTPP-------ASSFV-LTS-------DG-------SILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLE  296 (310)
Q Consensus       239 v~~g~~~~~~-------~~~~~-~~~-------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  296 (310)
                      +.++......       .+.+. ...       ..       +.++++++++++|++++.  ++++|+++++++|++.+.
T Consensus       226 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~  303 (315)
T 3goh_A          226 ICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIA--APDIFRFEQMIEALDHSE  303 (315)
T ss_dssp             EEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHH
T ss_pred             EEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccc--cceEecHHHHHHHHHHHH
Confidence            9997543111       11111 111       11       246789999999999864  579999999999999998


Q ss_pred             cCCCCccEEEEeC
Q 021628          297 SSRATGKVVIHPI  309 (310)
Q Consensus       297 ~~~~~~k~vi~~~  309 (310)
                        +..||++++++
T Consensus       304 --~~~gKvvi~~~  314 (315)
T 3goh_A          304 --QTKLKTVLTLN  314 (315)
T ss_dssp             --HHCCCEEEESC
T ss_pred             --hcCCcEEEEec
Confidence              66689999875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=4.7e-48  Score=343.93  Aligned_cols=295  Identities=31%  Similarity=0.465  Sum_probs=251.0

Q ss_pred             CEEEEEcccC---CCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEYG---NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~g---~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      |||+++.++|   .+ +.++++ +.|.|++++|||+|||.+++||++|++.+.|.    ...+|.++|||++|+|+++|+
T Consensus         3 MkA~~~~~~G~~~~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDG-NLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD----VSKAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             EEEEEBSSCCCGGGC-CCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC----CSSSCBCCCCCEEEEEEEECT
T ss_pred             cEEEEEEeccccCCC-ceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC----CCCCCcCcCCccEEEEEEeCC
Confidence            8999999998   44 678999 99999999999999999999999999998886    246799999999999999999


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccC------C
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFS------A  150 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~------~  150 (310)
                      +++++++||+|++...      ....|+|+||+++|.+.++++|+++++++|+.++++++|||+++ +.++++      +
T Consensus        77 ~v~~~~~GdrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  150 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSGS------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENE  150 (346)
T ss_dssp             TCCSCCTTCEEEECCC------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHT
T ss_pred             CCCcCCCCCEEEEcCC------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCC
Confidence            9999999999998531      23479999999999999999999999999999999999999999 578888      9


Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----cCCCccEEEeCCCC--
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----LPEKFDVVFDAVGQ--  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~dvvi~~~g~--  224 (310)
                      |++|+|+|++|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.++....    ..+++|++|||+|.  
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~  229 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM  229 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence            999999988999999999999996 99999999999999999999999999876422111    23489999999984  


Q ss_pred             -hHHHHhhcccCCEEEEEeCCCCC--------CceEEEEec-C-------------HHHHHHHHHHHHcCCeeEEecCCc
Q 021628          225 -CDKALKAVKEGGRVVSIIGSVTP--------PASSFVLTS-D-------------GSILEKLNPYFESGKVKAIIDPKG  281 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~~~--------~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~  281 (310)
                       ++.++++|+++|+++.++....+        ....+.... .             .+.++++++++++|++++.+  ++
T Consensus       230 ~~~~~~~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i--~~  307 (346)
T 3fbg_A          230 YYDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTT--TK  307 (346)
T ss_dssp             HHHHHHHHEEEEEEEEESSCCSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCE--EE
T ss_pred             HHHHHHHHhccCCEEEEECCCCCCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCc--cc
Confidence             47889999999999988754311        222332211 0             25588899999999998753  35


Q ss_pred             cc---chhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          282 PF---PFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       282 ~~---~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      +|   +++++++|++.+.+++..||++++++|
T Consensus       308 ~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          308 VIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             EEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             eecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            55   999999999999999999999999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.4e-47  Score=339.90  Aligned_cols=299  Identities=28%  Similarity=0.398  Sum_probs=252.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|+.   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~GhE~~G~V~~vG~~v~   75 (339)
T 1rjw_A            1 MKAAVVEQFKEP---LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV-KPKLPLIPGHEGVGIVEEVGPGVT   75 (339)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCC---cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc-CCCCCeeccccceEEEEEECCCCC
Confidence            999999999854   6888 99999999999999999999999999999987642 246799999999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||++.+..                   ....+....|+|+||+++|.+.++++|+++++++||.+++++.|||+
T Consensus        76 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  155 (339)
T 1rjw_A           76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYK  155 (339)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHH
Confidence            99999999864210                   00012234799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc----CCCccE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL----PEKFDV  217 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~dv  217 (310)
                      ++...++++|++|+|+|+ |++|++++|+|+.+ |++|+++++++++++.++++|++.++++.++++.+.    ..++|+
T Consensus       156 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          156 ALKVTGAKPGEWVAIYGI-GGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             HHHHHTCCTTCEEEEECC-STTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             HHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence            997779999999999996 88999999999996 999999999999999999999999988765543221    158999


Q ss_pred             EEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcc
Q 021628          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDPKGP  282 (310)
Q Consensus       218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (310)
                      +||++|.   .+.++++++++|+++.+|......          ...+..  ....++++++++++.++++++.   +++
T Consensus       234 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---~~~  310 (339)
T 1rjw_A          234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTI---IEV  310 (339)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCC---EEE
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCcc---EEE
Confidence            9999985   478899999999999998654211          111211  1235789999999999999874   478


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      |+++++++|++.+.+++..||++++++
T Consensus       311 ~~l~~~~~A~~~~~~~~~~gKvvi~~~  337 (339)
T 1rjw_A          311 QPLEKINEVFDRMLKGQINGRVVLTLE  337 (339)
T ss_dssp             EEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             EcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            999999999999999888899999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=8.8e-48  Score=342.43  Aligned_cols=297  Identities=20%  Similarity=0.265  Sum_probs=249.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||++++++|.+    +++ |.|.|++ ++|||+|||.+++||++|++.+.|..   +..+|.++|||++|+|+++|+++
T Consensus         1 MkAvv~~~~g~l----~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~---~~~~P~i~G~E~~G~V~~vG~~V   72 (346)
T 4a2c_A            1 MKSVVNDTDGIV----RVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG---AHYYPITLGHEFSGYIDAVGSGV   72 (346)
T ss_dssp             CEEEEECSSSCE----EEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC---SSSSSBCCCCEEEEEEEEECTTC
T ss_pred             CCEEEEecCCCE----EEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC---CCCCCccccEEEEEEEEEECCCc
Confidence            999999999976    999 9999985 79999999999999999999998865   35689999999999999999999


Q ss_pred             CCCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      .++++||+|.+.+..                  ....+...+|+|+||+++|.+.++++|+++++++||++. .+.++++
T Consensus        73 ~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~  151 (346)
T 4a2c_A           73 DDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH  151 (346)
T ss_dssp             CSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH
T ss_pred             ccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH
Confidence            999999999875421                  111234457999999999999999999999999999875 3456666


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcE-EEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK-VAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEK  214 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~v-i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~  214 (310)
                      ++...+.++|++|+|+| +|++|++++|+|+.+ |+++ ++++.+++|+++++++|+++++++.+.+..+      ..++
T Consensus       152 ~~~~~~~~~g~~VlV~G-aG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g  229 (346)
T 4a2c_A          152 AFHLAQGCENKNVIIIG-AGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF  229 (346)
T ss_dssp             HHHHTTCCTTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred             HHHHhccCCCCEEEEEC-CCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence            67889999999999999 699999999999997 8765 5667799999999999999999988766433      1358


Q ss_pred             ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-------------ceEEEEe-------cCHHHHHHHHHHHHcC
Q 021628          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-------------ASSFVLT-------SDGSILEKLNPYFESG  271 (310)
Q Consensus       215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-------------~~~~~~~-------~~~~~~~~~~~~~~~~  271 (310)
                      +|+|+|++|+   ++.++++++++|+++.+|....+.             ...+...       ...++++++++++.++
T Consensus       230 ~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g  309 (346)
T 4a2c_A          230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (346)
T ss_dssp             SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTT
T ss_pred             cccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcC
Confidence            9999999984   478899999999999998654321             1112111       1246789999999999


Q ss_pred             CeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          272 KVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++...++++|+++++++|++.+.+++..||+||.+
T Consensus       310 ~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          310 KLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             CSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            9987656678999999999999999999999999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.2e-47  Score=340.86  Aligned_cols=295  Identities=34%  Similarity=0.521  Sum_probs=250.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+||+.+++||++|++++.|..+.....+|.++|||++|+|+++|++++
T Consensus         8 mka~~~~~~~~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            8 MIAAVVEEANGP---FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             EEEEEECSTTCC---EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             heEEEEecCCCc---eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            899999999986   7999 999999999999999999999999999999875433457899999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      +|++||+|+++..+.    ...+|+|+||+++|.+.++++|+++++++||.++++++|||+++ +.+++++|++|||+|+
T Consensus        84 ~~~vGdrV~~~~~g~----~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  159 (343)
T 3gaz_A           84 SFRVGDAVFGLTGGV----GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGG  159 (343)
T ss_dssp             SCCTTCEEEEECCSS----TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETT
T ss_pred             CCCCCCEEEEEeCCC----CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            999999999875321    12469999999999999999999999999999999999999999 7899999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc------cCCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|++++|+|+.. |++|+++ .++++++.++++|++. ++ .++++.+      ...++|++|||+|.  +..++++
T Consensus       160 ~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~  235 (343)
T 3gaz_A          160 GGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSA  235 (343)
T ss_dssp             TSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHHHHH
Confidence            999999999999996 9999988 8999999999999988 66 4444322      13489999999985  5889999


Q ss_pred             cccCCEEEEEeCCCCC-------CceEEEEec-------------CHHHHHHHHHHHHcCCeeEEecCC-cccchhhHHH
Q 021628          232 VKEGGRVVSIIGSVTP-------PASSFVLTS-------------DGSILEKLNPYFESGKVKAIIDPK-GPFPFSQTLE  290 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  290 (310)
                      |+++|+++.+|.....       ....+....             ..++++++++++++|++++.  ++ ++|+++++++
T Consensus       236 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~l~~~~~  313 (343)
T 3gaz_A          236 VKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPR--LDPRTFSIAEIGS  313 (343)
T ss_dssp             EEEEEEEEESCCCSCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCC--BCSCCEETTCHHH
T ss_pred             HhcCCeEEEEcccCccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccC--ccCcEecHHHHHH
Confidence            9999999999865411       122222211             12668899999999999864  45 7999999999


Q ss_pred             HHHHHHcCCC----CccEEEEeC
Q 021628          291 AFSHLESSRA----TGKVVIHPI  309 (310)
Q Consensus       291 a~~~~~~~~~----~~k~vi~~~  309 (310)
                      |++.+.+++.    +||++++.+
T Consensus       314 A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          314 AYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             HHHHHHTCTTCCCCSSBCEEECC
T ss_pred             HHHHHHcCCCcccccceEEEEec
Confidence            9999998875    578888753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=7.2e-47  Score=336.00  Aligned_cols=302  Identities=34%  Similarity=0.460  Sum_probs=254.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2eih_A            1 MRAVVMRARGGP-EVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP-KLPLPHVLGADGSGVVDAVGPGVE   77 (343)
T ss_dssp             CEEEEECSSSSG-GGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST-TCCSSEECCSEEEEEEEEECSSCC
T ss_pred             CeEEEEecCCCC-ceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC-CCCCCcccccceEEEEEEECCCCC
Confidence            999999999987 678999 89999999999999999999999999999987642 236799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      ++++||||+..+...                  ...+....|+|+||+++|.+.++++|+++++++|+.+++++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            999999998543110                  00112346999999999999999999999999999999999999999


Q ss_pred             HHh-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--CCCc
Q 021628          143 LER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKF  215 (310)
Q Consensus       143 l~~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~  215 (310)
                      +.. +++++|++|+|+|++|++|++++++++.. |++|+++++++++++.++++|++.+++..++++.+    .  ..++
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~  236 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGA  236 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCc
Confidence            965 79999999999998899999999999996 99999999999999999999999888876554322    1  2479


Q ss_pred             cEEEeCCC--ChHHHHhhcccCCEEEEEeCCCCC-----------CceEEEE--ecCHHHHHHHHHHHHcCCeeEEecCC
Q 021628          216 DVVFDAVG--QCDKALKAVKEGGRVVSIIGSVTP-----------PASSFVL--TSDGSILEKLNPYFESGKVKAIIDPK  280 (310)
Q Consensus       216 dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (310)
                      |++||++|  ..+.++++++++|+++.+|.....           ....+..  ....++++++++++.++++++.  ++
T Consensus       237 d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~--i~  314 (343)
T 2eih_A          237 DKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPV--VG  314 (343)
T ss_dssp             EEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCC--EE
T ss_pred             eEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCc--ee
Confidence            99999998  358899999999999999864311           1122222  1235779999999999999864  36


Q ss_pred             cccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          281 GPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       281 ~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++|+++++++|++.+.+++..+|+++++
T Consensus       315 ~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          315 QVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             EEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             EEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            8999999999999999888889999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6.7e-47  Score=337.86  Aligned_cols=295  Identities=24%  Similarity=0.358  Sum_probs=244.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++.+.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus        27 mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~vG~~v~  104 (357)
T 1zsy_A           27 VRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL-LPELPAVGGNEGVAQVVAVGSNVT  104 (357)
T ss_dssp             EEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSEECCSCCEEEEEEECTTCC
T ss_pred             hEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC-CCCCCccccceEEEEEEEeCCCCC
Confidence            8999999999852347888 89999999999999999999999999999987642 235799999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      ++++||||++...        ..|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.+++++|++|+|+|+
T Consensus       105 ~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  176 (357)
T 1zsy_A          105 GLKPGDWVIPANA--------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNAS  176 (357)
T ss_dssp             SCCTTCEEEESSS--------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESST
T ss_pred             CCCCCCEEEEcCC--------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCC
Confidence            9999999998642        269999999999999999999999999999999999999999 4689999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChh----hHHHHHHcCCCEEeeCCC---CcccccCC---CccEEEeCCCC--hHH
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGADLAIDYTK---ENIEDLPE---KFDVVFDAVGQ--CDK  227 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~----~~~~~~~~g~~~~~~~~~---~~~~~~~~---~~dvvi~~~g~--~~~  227 (310)
                      +|++|++++|+|+.+ |+++++++++.+    +++.++++|+++++++.+   +...+..+   ++|+||||+|.  ...
T Consensus       177 ~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~  255 (357)
T 1zsy_A          177 NSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE  255 (357)
T ss_dssp             TSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHH
T ss_pred             cCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHH
Confidence            899999999999996 999988876432    567889999999988643   12222222   59999999984  467


Q ss_pred             HHhhcccCCEEEEEeCCCC-C----------CceEEEEec--------C----HHHHHHHHHHHHcCCeeEEecCCcccc
Q 021628          228 ALKAVKEGGRVVSIIGSVT-P----------PASSFVLTS--------D----GSILEKLNPYFESGKVKAIIDPKGPFP  284 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~-~----------~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (310)
                      ++++++++|+++.+|.... +          ....+....        .    .+.++++++++.+|++++.+  .++|+
T Consensus       256 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~  333 (357)
T 1zsy_A          256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPA--CSQVP  333 (357)
T ss_dssp             HHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC--EEEEE
T ss_pred             HHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCcc--ceEEc
Confidence            8999999999999975421 1          112222210        1    23578899999999998753  48999


Q ss_pred             hhhHHHHHHHHHcCCCCccEEEEe
Q 021628          285 FSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       285 ~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++++++|++.+.+++..||+++++
T Consensus       334 l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          334 LQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEeC
Confidence            999999999999888888999875

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3.8e-47  Score=339.86  Aligned_cols=298  Identities=22%  Similarity=0.292  Sum_probs=250.7

Q ss_pred             CEEEEEcccCCCccceEEecc--ccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETN--VEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~--~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      |||+++.+++.+   ++++ +  .|.|++++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++
T Consensus         7 mka~~~~~~~~~---l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~GhE~~G~V~~vG~~   80 (360)
T 1piw_A            7 FEGIAIQSHEDW---KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKMPLVVGHEIVGKVVKLGPK   80 (360)
T ss_dssp             EEEEEECCSSST---TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS--CCCSSEECCCCEEEEEEEECTT
T ss_pred             eEEEEEecCCCC---eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC--CCCCCcccCcCceEEEEEeCCC
Confidence            899999998854   5778 8  899999999999999999999999999998753  2457999999999999999999


Q ss_pred             CC-CCCCCCeeEeecC-------------------cc--ccC-----CCCCCCcceeEEEEecCccccCCCCCChhhhcc
Q 021628           79 VK-KFKVGDEVYGDIN-------------------EK--ALD-----HPKRNGSLAEYTAVEENLLALKPKNLSFVEAAS  131 (310)
Q Consensus        79 ~~-~~~~Gd~V~~~~~-------------------~~--~~~-----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  131 (310)
                      ++ ++++||||...+.                   ..  ...     +....|+|+||+++|.+.++++|+++++++||.
T Consensus        81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (360)
T 1piw_A           81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAP  160 (360)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGG
T ss_pred             CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhh
Confidence            99 9999999954211                   00  010     223479999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC-cccc
Q 021628          132 LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-NIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~  210 (310)
                      +++++.|||+++..+++++|++|+|+|+ |++|++++|+|+.+ |++|+++++++++++.++++|+++++++.++ ++.+
T Consensus       161 l~~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~  238 (360)
T 1piw_A          161 LLCGGLTVYSPLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE  238 (360)
T ss_dssp             GGTHHHHHHHHHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred             hhhhHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHH
Confidence            9999999999997789999999999996 99999999999996 9999999999999999999999999987655 4322


Q ss_pred             -cCCCccEEEeCCCC-----hHHHHhhcccCCEEEEEeCCCCCCceE----------EEE--ecCHHHHHHHHHHHHcCC
Q 021628          211 -LPEKFDVVFDAVGQ-----CDKALKAVKEGGRVVSIIGSVTPPASS----------FVL--TSDGSILEKLNPYFESGK  272 (310)
Q Consensus       211 -~~~~~dvvi~~~g~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~  272 (310)
                       ..+++|+|||++|.     .+.++++++++|+++.+|.......++          +..  ....++++++++++.+++
T Consensus       239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  318 (360)
T 1piw_A          239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKD  318 (360)
T ss_dssp             HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTT
T ss_pred             HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCCccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCC
Confidence             23589999999875     378899999999999998654210111          111  113578999999999999


Q ss_pred             eeEEecCCcccchhh--HHHHHHHHHcCCCCccEEEEeC
Q 021628          273 VKAIIDPKGPFPFSQ--TLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +++.  + ++|++++  +++|++.+.+++..||++|+++
T Consensus       319 l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          319 IKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             CCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             Ccce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            9875  3 7999999  9999999999888899999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=1e-47  Score=338.92  Aligned_cols=297  Identities=20%  Similarity=0.219  Sum_probs=250.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|  ++
T Consensus         1 MkA~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~~G--v~   75 (324)
T 3nx4_A            1 MQALILEQQDGK-TLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI-IRHFPMIPGIDFAGTVHASE--DP   75 (324)
T ss_dssp             CEEEEEEESSSS-EEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC-CCSSSBCCCSEEEEEEEEES--ST
T ss_pred             CceEEEecCCCC-ceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC-CCCCCccccceeEEEEEEeC--CC
Confidence            999999999998 788999 99999999999999999999999999999997642 35789999999999999998  57


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH---hcccCCCC-EEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGK-SILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~-~vlI  156 (310)
                      ++++||||++....   .+....|+|+||+++|.+.++++|+++++++||+++++++|||+++.   ..++++++ +|+|
T Consensus        76 ~~~vGdrV~~~~~~---~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV  152 (324)
T 3nx4_A           76 RFHAGQEVLLTGWG---VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVV  152 (324)
T ss_dssp             TCCTTCEEEEECTT---BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEcccc---cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEE
Confidence            89999999986421   12234799999999999999999999999999999999999998873   45566633 4999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc-c-cCCCccEEEeCCCC--hHHHHhhc
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE-D-LPEKFDVVFDAVGQ--CDKALKAV  232 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~dvvi~~~g~--~~~~~~~l  232 (310)
                      +|++|++|++++|+|+.+ |++|++++++++|++.++++|+++++++++.+.. . ...++|++|||+|.  ++.+++++
T Consensus       153 ~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  231 (324)
T 3nx4_A          153 TGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVLAQM  231 (324)
T ss_dssp             SSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHHHTE
T ss_pred             ECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHHHHH
Confidence            998899999999999996 9999999999999999999999999987654431 1 13489999999984  58999999


Q ss_pred             ccCCEEEEEeCCCCCC-----------ceEEEEec----C----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628          233 KEGGRVVSIIGSVTPP-----------ASSFVLTS----D----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS  293 (310)
Q Consensus       233 ~~~G~~v~~g~~~~~~-----------~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  293 (310)
                      +++|+++.+|......           ...+....    .    .+.++.+++++++|++++.   +++|+++++++|++
T Consensus       232 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~  308 (324)
T 3nx4_A          232 NYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA---ATEITLADAPKFAD  308 (324)
T ss_dssp             EEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH---EEEEEGGGHHHHHH
T ss_pred             hcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC---ceeEeHHHHHHHHH
Confidence            9999999998654211           11122110    1    2567889999999998763   68999999999999


Q ss_pred             HHHcCCCCccEEEEeC
Q 021628          294 HLESSRATGKVVIHPI  309 (310)
Q Consensus       294 ~~~~~~~~~k~vi~~~  309 (310)
                      .+.+++..||++++++
T Consensus       309 ~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          309 AIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHTTCCCSEEEEECC
T ss_pred             HHHhCCCCceEEEecC
Confidence            9999999999999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-47  Score=337.37  Aligned_cols=301  Identities=23%  Similarity=0.286  Sum_probs=246.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhC-CCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.+++.    ++++ +.|.|++++|||+||+.+++||++|++.+.+ .++.....+|.++|||++|+|+++|+++
T Consensus         5 mka~~~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (352)
T 1e3j_A            5 NLSAVLYKQND----LRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   79 (352)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             CEEEEEEcCCc----EEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence            89999998764    5888 8999999999999999999999999998874 3322223579999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCC-CCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDH-PKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      +++++||||++.+...                  ...+ ....|+|+||+++|.+.++++|+++++++|+++ ..+.|||
T Consensus        80 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~  158 (352)
T 1e3j_A           80 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGV  158 (352)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHH
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHH
Confidence            9999999998753210                  0001 123699999999999999999999999999876 4677999


Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc-----c---
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-----L---  211 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-----~---  211 (310)
                      ++++.+++++|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.+ +++.+     .   
T Consensus       159 ~al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          159 HACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccc
Confidence            999888999999999999 599999999999996 999999999999999999999999988764 33321     1   


Q ss_pred             -CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe-cCHHHHHHHHHHHHcCCeeEE
Q 021628          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT-SDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 -~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  276 (310)
                       .+++|++||++|.   ++.++++++++|+++.+|......          ...+... ....+++++++++.+++++..
T Consensus       237 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~  316 (352)
T 1e3j_A          237 IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVK  316 (352)
T ss_dssp             SSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCG
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChH
Confidence             2579999999984   478899999999999998643111          1122211 123568999999999998754


Q ss_pred             ecCCcccchhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSR-ATGKVVIHPI  309 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~~  309 (310)
                      ..++++|+++++++|++.+.+++ ..+|++|+++
T Consensus       317 ~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          317 QLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             HheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            45578999999999999999887 6889999886

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=7.4e-47  Score=337.15  Aligned_cols=295  Identities=27%  Similarity=0.428  Sum_probs=249.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC-
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~-   79 (310)
                      |||+++.++|.+ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|+++ 
T Consensus        23 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   99 (354)
T 2j8z_A           23 MLAVHFDKPGGP-ENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP-PPGASNILGLEASGHVAELGPGCQ   99 (354)
T ss_dssp             EEEEEESSCSSG-GGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CTTSCSSSCSEEEEEEEEECSCC-
T ss_pred             eeEEEEccCCCc-cceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC-CCCCCcccceeeEEEEEEECCCcC
Confidence            899999999987 778999 99999999999999999999999999999997642 23578999999999999999999 


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEc
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG  158 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g  158 (310)
                      +++++||+|+++..         .|+|+||+++|.+.++++|+++++++||+++++++|||+++ +.+++++|++|+|+|
T Consensus       100 ~~~~vGdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~G  170 (354)
T 2j8z_A          100 GHWKIGDTAMALLP---------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHA  170 (354)
T ss_dssp             -CCCTTCEEEEECS---------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESS
T ss_pred             CCCCCCCEEEEecC---------CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            99999999998743         59999999999999999999999999999999999999999 678999999999999


Q ss_pred             CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--CCCccEEEeCCCC--hHHHHh
Q 021628          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~~dvvi~~~g~--~~~~~~  230 (310)
                      ++|++|++++++++.. |++|+++++++++++.++++|++.+++..++++.+    .  ..++|++|||+|.  ...+++
T Consensus       171 a~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~  249 (354)
T 2j8z_A          171 GLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVN  249 (354)
T ss_dssp             TTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHH
T ss_pred             CccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHH
Confidence            9999999999999996 99999999999999999999999988876654322    1  2479999999984  578899


Q ss_pred             hcccCCEEEEEeCCCCC-C-----------ceEEEEec---CH---------HHHHHHHHHHHcC---CeeEEecCCccc
Q 021628          231 AVKEGGRVVSIIGSVTP-P-----------ASSFVLTS---DG---------SILEKLNPYFESG---KVKAIIDPKGPF  283 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-~-----------~~~~~~~~---~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~  283 (310)
                      +|+++|+++.+|..... .           ...+....   ..         ..++++++++++|   ++++.  ++++|
T Consensus       250 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~--i~~~~  327 (354)
T 2j8z_A          250 CLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV--LDRIY  327 (354)
T ss_dssp             HEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCC--EEEEE
T ss_pred             hccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCc--cceEE
Confidence            99999999999864321 1           11222211   11         1134588899999   77654  46899


Q ss_pred             chhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          284 PFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       284 ~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      +++++++|++.+.+++..||+++++.+
T Consensus       328 ~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          328 PVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             EGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            999999999999988888999998753

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-46  Score=337.02  Aligned_cols=298  Identities=22%  Similarity=0.263  Sum_probs=249.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.++++.   ++++ +.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        23 ~~a~~~~~~~~~---l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~V~   96 (369)
T 1uuf_A           23 IKAVGAYSAKQP---LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEIVGRVVAVGDQVE   96 (369)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS--CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEcCCCCC---cEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCCeecccCceEEEEEECCCCC
Confidence            899998877654   7999 9999999999999999999999999999998653  245799999999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------c--cc------CCCCCCCcceeEEEEecCccccCCCC-CChhhhccc
Q 021628           81 KFKVGDEVYGDINE-------------------K--AL------DHPKRNGSLAEYTAVEENLLALKPKN-LSFVEAASL  132 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~--~~------~~~~~~g~~~~~~~~~~~~~~~ip~~-~~~~~aa~~  132 (310)
                      ++++||||++.+..                   .  ..      .+....|+|+||+++|.+.++++|++ +++++||.+
T Consensus        97 ~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l  176 (369)
T 1uuf_A           97 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPL  176 (369)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGG
T ss_pred             CCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhh
Confidence            99999999864210                   0  01      02234699999999999999999999 999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc-ccc
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI-EDL  211 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~  211 (310)
                      ++++.|||+++...++++|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.++++ ...
T Consensus       177 ~~~~~tA~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~  254 (369)
T 1uuf_A          177 LCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH  254 (369)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh
Confidence            99999999999777999999999999 599999999999996 999999999999999999999999998766442 223


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEE--ecCHHHHHHHHHHHHcCCeeE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVL--TSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      .+++|+|||++|.   ++.++++++++|+++.+|......           ...+..  ....+++++++++++++++++
T Consensus       255 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~  334 (369)
T 1uuf_A          255 LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVA  334 (369)
T ss_dssp             TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCC
T ss_pred             hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCc
Confidence            3689999999983   588999999999999998653211           112222  123577999999999999987


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .+   +.|+++++++|++.+.+++..+|++++++
T Consensus       335 ~i---~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          335 DI---EMIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             CE---EEECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             ce---EEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            53   57999999999999998888899999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-46  Score=332.09  Aligned_cols=293  Identities=26%  Similarity=0.340  Sum_probs=250.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|.+ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~p~v~G~E~~G~V~~vG~~v~   77 (327)
T 1qor_A            2 ATRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEAAGIVSKVGSGVK   77 (327)
T ss_dssp             CEEEEBSSCCSG-GGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEcCCCCh-hheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCCCceeEEEEEEECCCCC
Confidence            999999999887 778999 8999999999999999999999999999998763  245799999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                      ++++|||| +...       ...|+|+||+++|.+.++++|+++++++||+++++++|||+++. .+++++|++|+|+|+
T Consensus        78 ~~~~GdrV-~~~g-------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           78 HIKAGDRV-VYAQ-------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             SCCTTCEE-EESC-------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCEE-EECC-------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence            99999999 4321       12599999999999999999999999999999999999999995 789999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~  231 (310)
                      +|++|++++++++.. |++|+++++++++++.++++|++.+++..+++..+.      ..++|++||++|.  .+.++++
T Consensus       150 ~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~  228 (327)
T 1qor_A          150 AGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDC  228 (327)
T ss_dssp             TBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHT
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHH
Confidence            999999999999996 999999999999999999999998888766543221      2479999999983  5889999


Q ss_pred             cccCCEEEEEeCCCCC-C-----------ceEEEEec----------CHHHHHHHHHHHHcCCeeEEecCC--cccchhh
Q 021628          232 VKEGGRVVSIIGSVTP-P-----------ASSFVLTS----------DGSILEKLNPYFESGKVKAIIDPK--GPFPFSQ  287 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~-~-----------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  287 (310)
                      ++++|+++.+|..... .           ...+....          ..+.++++++++.++++++.  ++  ++|++++
T Consensus       229 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~~l~~  306 (327)
T 1qor_A          229 LQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVD--VAEQQKYPLKD  306 (327)
T ss_dssp             EEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCC--CCGGGEEEGGG
T ss_pred             hcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccc--cccCcEEcHHH
Confidence            9999999999864311 1           11111100          13457899999999999864  57  8999999


Q ss_pred             HHHHHHHHHcCCCCccEEEEe
Q 021628          288 TLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       288 ~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +++|++.+.+++..||+++++
T Consensus       307 ~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          307 AQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHhCCCCceEEEeC
Confidence            999999999888889999864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-46  Score=338.45  Aligned_cols=298  Identities=20%  Similarity=0.261  Sum_probs=248.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus         7 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~v~   79 (371)
T 1f8f_A            7 IIAAVTPCKGAD---FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEGSGIIEAIGPNVT   79 (371)
T ss_dssp             EEEEEBCSTTCC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             ceEEEEcCCCCC---eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC---CCCCcccCcccceEEEEeCCCCC
Confidence            899999998864   6888 8999999999999999999999999999998653   45799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc--------------------cc--------------CC------CCCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINEK--------------------AL--------------DH------PKRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~--------------------~~--------------~~------~~~~g~~~~~~~~~~~~~~~i  120 (310)
                      ++++||||++.+...                    ..              ++      ....|+|+||+++|.+.++++
T Consensus        80 ~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~i  159 (371)
T 1f8f_A           80 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  159 (371)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEEC
Confidence            999999998743000                    00              00      012589999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      |+++++++||.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|++
T Consensus       160 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  237 (371)
T 1f8f_A          160 TKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGAT  237 (371)
T ss_dssp             CTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCC
Confidence            99999999999999999999999 688999999999999 699999999999996 98 588889999999999999999


Q ss_pred             EEeeCCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CC----------ceEEEEec--
Q 021628          199 LAIDYTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PP----------ASSFVLTS--  256 (310)
Q Consensus       199 ~~~~~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~----------~~~~~~~~--  256 (310)
                      +++++.++++.+     ..+++|+|||++|.   ++.++++|+++|+++.+|....  ..          ...+....  
T Consensus       238 ~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          238 HVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             EEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             EEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            999887655422     12379999999984   4789999999999999986531  11          11222211  


Q ss_pred             ---CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          257 ---DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       257 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                         ..+++++++++++++++++...+++ |+++++++|++.+.+++. +|++|++.
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence               1367899999999999987545567 999999999999988876 69999863

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=8.3e-47  Score=339.34  Aligned_cols=299  Identities=26%  Similarity=0.315  Sum_probs=248.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+|||.+++||++|++++.|.++  ...+|.++|||++|+|+++|++++
T Consensus         7 mkA~~~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~V~   80 (373)
T 2fzw_A            7 CKAAVAWEAGKP---LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLGAGIVESVGEGVT   80 (373)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT--TCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEecCCCC---cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC--CCCCCccccccccEEEEEECCCCC
Confidence            899999999864   6888 8999999999999999999999999999998763  246799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc------------------------cc--CC-------------CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEK------------------------AL--DH-------------PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------------~~--~~-------------~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||++.+...                        +.  ++             ....|+|+||+++|.+.++++|
T Consensus        81 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence            999999998764210                        00  00             0125999999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++||++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|+++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~  238 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATE  238 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCCce
Confidence            9999999999999999999998 578999999999999 699999999999996 98 7889999999999999999999


Q ss_pred             EeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEec-
Q 021628          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLTS-  256 (310)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~~-  256 (310)
                      ++++.+  +++.+     ..+++|+|||++|.   ++.++++++++ |+++.+|........           .+.... 
T Consensus       239 vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  318 (373)
T 2fzw_A          239 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAF  318 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEecc
Confidence            988764  23321     12389999999985   47899999999 999999864321111           111111 


Q ss_pred             ----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          257 ----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       257 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                          ..+++++++++++++++++...++++|+++++++|++.+.+++. +|++|+|
T Consensus       319 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          319 GGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence                14678999999999999865455789999999999999988876 5999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=9.4e-47  Score=338.93  Aligned_cols=297  Identities=23%  Similarity=0.261  Sum_probs=246.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++   ..+|.++|||++|+|+++|++++
T Consensus        10 mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~v~   82 (373)
T 1p0f_A           10 CKAAVAWEPHKP---LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVESIGAGVT   82 (373)
T ss_dssp             EEEEEBSSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             eEEEEEEcCCCC---eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC---CCCCcccCcCceEEEEEECCCCC
Confidence            899999998864   6888 8999999999999999999999999999998753   46799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc------------------------cc--CC-------------CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEK------------------------AL--DH-------------PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------------~~--~~-------------~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||++.+...                        +.  ++             ....|+|+||+++|.+.++++|
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  162 (373)
T 1p0f_A           83 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  162 (373)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECC
Confidence            999999998764210                        00  00             0124999999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      ++++++ ||++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|+++
T Consensus       163 ~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~  239 (373)
T 1p0f_A          163 PKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATE  239 (373)
T ss_dssp             TTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcCCcE
Confidence            999999 999999999999998 578999999999999 699999999999996 98 7889999999999999999999


Q ss_pred             EeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEe--
Q 021628          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLT--  255 (310)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~--  255 (310)
                      ++++.+  +++.+     ..+++|+|||++|.   +..++++++++ |+++.+|........           .+...  
T Consensus       240 vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  319 (373)
T 1p0f_A          240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVF  319 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCceEEeecc
Confidence            998764  33321     12389999999984   47899999999 999999864321111           11111  


Q ss_pred             --cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          256 --SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                        ...+++++++++++++++++...++++|+++++++|++.+.+++. +|++|+|
T Consensus       320 ~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          320 GGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             GGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             CCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence              123579999999999999864455789999999999999987775 6999875

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-46  Score=335.97  Aligned_cols=297  Identities=24%  Similarity=0.331  Sum_probs=245.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCC-CCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      |||+++.++|+.   ++++ +.|.|+ +++|||+||+.+++||++|++.+.|.++. ....+|.++|||++|+|+++|++
T Consensus        16 mka~~~~~~g~~---l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           16 LKAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -CEEEESSTTSC---CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ceEEEEecCCCC---cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            899999999854   6888 899999 99999999999999999999999986531 02367999999999999999999


Q ss_pred             CCCCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhc---cccchHH
Q 021628           79 VKKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAA---SLPLATE  137 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa---~~~~~~~  137 (310)
                      ++++++||||++....                  ....+....|+|+||+++|.+.++++|+++++++||   .+++++.
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~  171 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGI  171 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHH
Confidence            9999999999775321                  001122347999999999999999999999999999   7888999


Q ss_pred             HHHHHHHh--cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c
Q 021628          138 TAYEGLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L  211 (310)
Q Consensus       138 ta~~al~~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~  211 (310)
                      |||+++..  +++++|++|+|+|+ |++|++++|+|+.++|++|++++++++|++.++++|+++++++.++ +.+    .
T Consensus       172 ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v~~~  249 (359)
T 1h2b_A          172 TAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQVMEL  249 (359)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHHHHH
T ss_pred             HHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHHHHH
Confidence            99999976  89999999999996 9999999999998428899999999999999999999999998765 321    1


Q ss_pred             --CCCccEEEeCCCCh-----HHHHhhcccCCEEEEEeCCCCC---------CceEEEE--ecCHHHHHHHHHHHHcCCe
Q 021628          212 --PEKFDVVFDAVGQC-----DKALKAVKEGGRVVSIIGSVTP---------PASSFVL--TSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       212 --~~~~dvvi~~~g~~-----~~~~~~l~~~G~~v~~g~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~~~~~  273 (310)
                        ..++|+|||++|..     ..++++  ++|+++.+|....+         ....+..  ....++++++++++.++++
T Consensus       250 ~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  327 (359)
T 1h2b_A          250 TRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKV  327 (359)
T ss_dssp             TTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSC
T ss_pred             hCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCCCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC
Confidence              23799999999853     455555  99999999865322         1112221  1235789999999999999


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++.  + ++|+++++++|++.+.+++..||+++++
T Consensus       328 ~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          328 RVE--V-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CCC--E-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cce--E-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            864  3 8999999999999999988889999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.2e-46  Score=338.48  Aligned_cols=298  Identities=24%  Similarity=0.304  Sum_probs=247.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+|||.+++||++|++++.|.++   ..+|.++|||++|+|+++|++++
T Consensus         9 mkA~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            9 CKAAVLWEEKKP---FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCc---eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC---CCCCcccCcCceEEEEEECCCCC
Confidence            899999999865   6888 8999999999999999999999999999998763   23799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc------------------------cc--CC-------------CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEK------------------------AL--DH-------------PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~------------------------~~--~~-------------~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||++.+...                        +.  ++             ....|+|+||+++|.+.++++|
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999998764200                        00  00             0124999999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCE
Q 021628          122 KNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++++||++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|+++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~  239 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGATE  239 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCce
Confidence            9999999999999999999998 578999999999999 799999999999996 98 7889999999999999999999


Q ss_pred             EeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce-----------EEEEec-
Q 021628          200 AIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS-----------SFVLTS-  256 (310)
Q Consensus       200 ~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~-----------~~~~~~-  256 (310)
                      ++++.+  +++.+     ..+++|+|||++|.   ++.++++++++ |+++.+|........           .+.... 
T Consensus       240 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  319 (374)
T 2jhf_A          240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIF  319 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEecc
Confidence            988764  23321     12389999999985   47889999999 999999864321111           121111 


Q ss_pred             ----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          257 ----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       257 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                          ..+++++++++++++++++...++++|+++++++|++.+.+++. +|++|+|
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence                14678999999999999865456789999999999999988775 5999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-46  Score=334.03  Aligned_cols=300  Identities=23%  Similarity=0.353  Sum_probs=251.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|+.   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++++
T Consensus         6 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~vG~~v~   80 (347)
T 2hcy_A            6 QKGVIFYESHGK---LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL-PVKLPLVGGHEGAGVVVGMGENVK   80 (347)
T ss_dssp             EEEEEESSTTCC---CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEeCCCCC---CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC-CCCCCcccCccceEEEEEECCCCC
Confidence            899999999854   6888 89999999999999999999999999999987642 246799999999999999999999


Q ss_pred             CCCCCCeeEeecCc------------c-------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE------------K-------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------~-------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||++.+..            .       ...+....|+|+||+++|.+.++++|+++++++|+.++++++|||+
T Consensus        81 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  160 (347)
T 2hcy_A           81 GWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYK  160 (347)
T ss_dssp             SCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHH
T ss_pred             CCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHH
Confidence            99999999864210            0       0012234799999999999999999999999999999999999999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCC-CCccccc-----CCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT-KENIEDL-----PEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-----~~~~  215 (310)
                      ++...++++|++|+|+|++|++|++++++++.. |++|+++++++++++.++++|++.+++.. .+++.+.     ..++
T Consensus       161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~  239 (347)
T 2hcy_A          161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGA  239 (347)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCC
Confidence            998779999999999998899999999999996 99999999999999999999999888865 3333221     1279


Q ss_pred             cEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-C----------ceEEEE--ecCHHHHHHHHHHHHcCCeeEEecC
Q 021628          216 DVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-P----------ASSFVL--TSDGSILEKLNPYFESGKVKAIIDP  279 (310)
Q Consensus       216 dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  279 (310)
                      |++||++|.   .+.++++|+++|+++.+|..... .          ...+..  .....+++++++++.++++++.   
T Consensus       240 D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~---  316 (347)
T 2hcy_A          240 HGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP---  316 (347)
T ss_dssp             EEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCC---
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccc---
Confidence            999999985   47889999999999999865421 1          111111  1235789999999999999874   


Q ss_pred             CcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          280 KGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       280 ~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +++|+++++++|++.+.+++..||++++++
T Consensus       317 ~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          317 IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            478999999999999998888899999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.7e-47  Score=339.44  Aligned_cols=301  Identities=23%  Similarity=0.316  Sum_probs=245.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCC-CCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.+++.    ++++ +.|.|++++|||+|||.+++||++|++.+.+. .+.....+|.++|||++|+|+++|+++
T Consensus         8 mka~~~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V   82 (356)
T 1pl8_A            8 NLSLVVHGPGD----LRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (356)
T ss_dssp             CEEEEEEETTE----EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEecCCc----EEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCC
Confidence            99999998764    5888 89999999999999999999999999998853 211123578999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCCC-CCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDHP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      +++++||||++.+...                  ...+. ...|+|+||+++|.+.++++|+++++++|+.+ ..+.|||
T Consensus        83 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~  161 (356)
T 1pl8_A           83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGI  161 (356)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHH
T ss_pred             CCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHH
Confidence            9999999998753210                  00111 23699999999999999999999999999876 4678999


Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCC---Ccccc-----c
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK---ENIED-----L  211 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~-----~  211 (310)
                      ++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++++++++++|+++++++..   +++.+     .
T Consensus       162 ~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~  239 (356)
T 1pl8_A          162 HACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL  239 (356)
T ss_dssp             HHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh
Confidence            999888999999999999 699999999999996 98 8999999999999999999999988762   22211     1


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc----------eEEEEe-cCHHHHHHHHHHHHcCCeeEEe
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVLT-SDGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      .+++|+|||++|.   ++.++++|+++|+++.+|.......          ..+... ....++++++++++++++++..
T Consensus       240 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  319 (356)
T 1pl8_A          240 GCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKP  319 (356)
T ss_dssp             TSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGG
T ss_pred             CCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHH
Confidence            2589999999984   4788999999999999986432111          112111 1235689999999999987544


Q ss_pred             cCCcccchhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          278 DPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      .++++|+++++++|++.+.++ ..+|++|+++|
T Consensus       320 ~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~  351 (356)
T 1pl8_A          320 LVTHRFPLEKALEAFETFKKG-LGLKIMLKCDP  351 (356)
T ss_dssp             GEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCT
T ss_pred             heEEEecHHHHHHHHHHHhCC-CceEEEEeCCC
Confidence            557899999999999999888 77899999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.2e-48  Score=345.06  Aligned_cols=298  Identities=23%  Similarity=0.325  Sum_probs=248.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++    ++++ +.|.|++++|||+||+.+++||++|++.+.|.+   +..+|.++|||++|+|+++|++++
T Consensus        24 mkA~v~~~~~~----l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~---~~~~p~v~G~e~~G~V~~vG~~v~   95 (370)
T 4ej6_A           24 MKAVRLESVGN----ISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF---PSTPPVTLGHEFCGIVVEAGSAVR   95 (370)
T ss_dssp             EEEEEEEETTE----EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS---CCCSSEECCCSEEEEEEEECTTCC
T ss_pred             eEEEEEecCCc----eEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC---CCCCCeecCcceEEEEEEECCCCC
Confidence            89999999875    4999 999999999999999999999999999999976   356799999999999999999999


Q ss_pred             CCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHH
Q 021628           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEG  142 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  142 (310)
                      ++++||||++.+..                  ....+....|+|+||+++|.+.++++|+++++++|| ++.++.+||++
T Consensus        96 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~  174 (370)
T 4ej6_A           96 DIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHG  174 (370)
T ss_dssp             SSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHH
Confidence            99999999875321                  111223457999999999999999999999999997 66688999999


Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc--------cCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED--------LPE  213 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~  213 (310)
                      ++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|+++++++.++++.+        ..+
T Consensus       175 l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~g  252 (370)
T 4ej6_A          175 VDLSGIKAGSTVAILG-GGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPG  252 (370)
T ss_dssp             HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTT
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCC
Confidence            9889999999999999 599999999999996 98 788888999999999999999999987665422        123


Q ss_pred             CccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC--CC----------ceEEEE-ecCHHHHHHHHHHHHcCCeeEEe
Q 021628          214 KFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT--PP----------ASSFVL-TSDGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       214 ~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~--~~----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      ++|+||||+|.   .+.++++++++|+++.+|....  ..          ...+.. ......++++++++++|++++..
T Consensus       253 g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  332 (370)
T 4ej6_A          253 GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIEIDR  332 (370)
T ss_dssp             CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSCCGG
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCChhH
Confidence            89999999984   5899999999999999986542  11          111111 12345689999999999998765


Q ss_pred             cCCcccchhhHHHHHHHHHcCC-CCccEEEEeC
Q 021628          278 DPKGPFPFSQTLEAFSHLESSR-ATGKVVIHPI  309 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~-~~~k~vi~~~  309 (310)
                      .++++|+++++++|++.+.+++ ..+|++++++
T Consensus       333 ~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~  365 (370)
T 4ej6_A          333 MISRRISLDEAPDVISNPAAAGEVKVLVIPSAE  365 (370)
T ss_dssp             GEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred             cEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence            6679999999999999998776 4467777654

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.6e-46  Score=332.54  Aligned_cols=296  Identities=24%  Similarity=0.352  Sum_probs=248.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.++|.+ +.++++ +.|.|++++|||+||+.+++||++|++.+.|.+ +.....+|.++|||++|+|+++|+++
T Consensus         2 Mka~~~~~~g~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   79 (333)
T 1wly_A            2 VMAAVIHKKGGP-DNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGV   79 (333)
T ss_dssp             CEEEEESSCSSG-GGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTC
T ss_pred             cEEEEEcccCCc-ceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCC
Confidence            899999999987 788999 999999999999999999999999999998865 11113579999999999999999999


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhh--hccccchHHHHHHHHH-hcccCCCCEEEE
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVE--AASLPLATETAYEGLE-RSAFSAGKSILV  156 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~al~-~~~~~~g~~vlI  156 (310)
                      +++++||||+....        ..|+|+||+++|.+.++++|+++++++  ||+++++++|||+++. .+++++|++|+|
T Consensus        80 ~~~~~GdrV~~~~~--------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV  151 (333)
T 1wly_A           80 TDFTVGERVCTCLP--------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI  151 (333)
T ss_dssp             CSCCTTCEEEECSS--------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             CCCCCCCEEEEecC--------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE
Confidence            99999999977531        259999999999999999999999999  9999999999999995 789999999999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHH
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKA  228 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~  228 (310)
                      +|++|++|++++++++.. |++|+++++++++++.++++|++.+++..+++..+.      ..++|++|||+|.  .+.+
T Consensus       152 ~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~  230 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKS  230 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHH
T ss_pred             ECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHH
Confidence            998999999999999996 999999999999999999999998888766543221      3479999999984  5899


Q ss_pred             HhhcccCCEEEEEeCCCC-CC-----------c--eEEEEe-----cC----HHHHHHHHHHHHcCCeeEEecCCcccch
Q 021628          229 LKAVKEGGRVVSIIGSVT-PP-----------A--SSFVLT-----SD----GSILEKLNPYFESGKVKAIIDPKGPFPF  285 (310)
Q Consensus       229 ~~~l~~~G~~v~~g~~~~-~~-----------~--~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
                      +++++++|+++.+|.... ..           .  ..+...     ..    .+.++++++++.++++++.  ++++|++
T Consensus       231 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l  308 (333)
T 1wly_A          231 LDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSS--VAKTFPL  308 (333)
T ss_dssp             HHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCC--EEEEEEG
T ss_pred             HHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCC--cceEEeH
Confidence            999999999999985431 10           1  221110     01    2368899999999999864  4689999


Q ss_pred             hhHHHHHHHHHcCCCCccEEEEeC
Q 021628          286 SQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       286 ~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +++++|++.+.+++..||++++++
T Consensus       309 ~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          309 REAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             GGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             HHHHHHHHHHHcCCCceEEEEEeC
Confidence            999999999999888899999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2.6e-46  Score=336.40  Aligned_cols=298  Identities=22%  Similarity=0.290  Sum_probs=246.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+|||.+++||++|++.+.|. +  ...+|.++|||++|+|+++|++++
T Consensus         9 mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~--~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            9 CKAAIAWKTGSP---LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK-K--KALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S--CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eeEEEEecCCCC---eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C--CCCCCcccCccccEEEEEECCCCc
Confidence            899999998864   6888 89999999999999999999999999998885 2  246799999999999999999999


Q ss_pred             CCCCCCeeEeecCcc----------------------------cc--CC-------------CCCCCcceeEEEEecCcc
Q 021628           81 KFKVGDEVYGDINEK----------------------------AL--DH-------------PKRNGSLAEYTAVEENLL  117 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~----------------------------~~--~~-------------~~~~g~~~~~~~~~~~~~  117 (310)
                      ++++||||++.+...                            +.  ++             ....|+|+||+++|.+.+
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence            999999998764210                            00  00             012499999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHc
Q 021628          118 ALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~  195 (310)
                      +++|+++++++||++++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l  239 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL  239 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh
Confidence            99999999999999999999999998 578999999999999 699999999999996 98 788999999999999999


Q ss_pred             CCCEEeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCce---------EEEEe
Q 021628          196 GADLAIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPAS---------SFVLT  255 (310)
Q Consensus       196 g~~~~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~---------~~~~~  255 (310)
                      |+++++++.+  +++.+     ...++|+|||++|.   ++.++++++++ |+++.+|.......+         .+...
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~  319 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGT  319 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEEC
T ss_pred             CCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEE
Confidence            9999998764  33322     12389999999985   47899999999 999999863211000         11111


Q ss_pred             c-----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          256 S-----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       256 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .     ..++++++++++.++++++...++++|+++++++|++.+.+++. +|++|+|
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          320 FFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            1     14678999999999999865456789999999999999988775 6999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.3e-46  Score=334.76  Aligned_cols=296  Identities=35%  Similarity=0.581  Sum_probs=249.6

Q ss_pred             CEEEEEcccCCCccceEE-eccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCC-------------CCCCCCCcccc
Q 021628            1 MKAWVYKEYGNSQSVLKF-ETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFS-------------ATDSPLPTIPG   65 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~-~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~-------------~~~~~~p~~~G   65 (310)
                      |||+++.++|++ +.+++ + +.|.|++ ++|||+||+.+++||++|++.+.|.++             .....+|.++|
T Consensus        22 mka~~~~~~g~~-~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G   99 (375)
T 2vn8_A           22 SMAWVIDKYGKN-EVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLG   99 (375)
T ss_dssp             EEEEEBSSCCSG-GGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCC
T ss_pred             ceeEEeccCCCc-cceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccc
Confidence            899999999887 77899 7 8999985 999999999999999999999988531             11124799999


Q ss_pred             cceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-H
Q 021628           66 YDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-E  144 (310)
Q Consensus        66 ~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~  144 (310)
                      ||++|+|+++|++++++++||+|++...      ....|+|+||+++|.+.++++|+++++++||+++++++|||+++ +
T Consensus       100 ~E~~G~V~~vG~~V~~~~vGDrV~~~~~------~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~  173 (375)
T 2vn8_A          100 RDVSGVVMECGLDVKYFKPGDEVWAAVP------PWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK  173 (375)
T ss_dssp             CEEEEEEEEECTTCCSCCTTCEEEEECC------TTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTT
T ss_pred             eeeeEEEEEeCCCCCCCCCCCEEEEecC------CCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHH
Confidence            9999999999999999999999998642      12369999999999999999999999999999999999999999 4


Q ss_pred             hcc----cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc---cCCCccE
Q 021628          145 RSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED---LPEKFDV  217 (310)
Q Consensus       145 ~~~----~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~dv  217 (310)
                      .++    +++|++|+|+|++|++|++++|+|+.+ |++|++++ ++++++.++++|++.++++.++++.+   ...++|+
T Consensus       174 ~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~  251 (375)
T 2vn8_A          174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDF  251 (375)
T ss_dssp             TTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred             hcccccccCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCE
Confidence            678    999999999999999999999999996 99998887 67899999999999999887655432   1258999


Q ss_pred             EEeCCCCh----HHHHhhcccCCEEEEEeCCCCC---------------------------CceEEEE---ecCHHHHHH
Q 021628          218 VFDAVGQC----DKALKAVKEGGRVVSIIGSVTP---------------------------PASSFVL---TSDGSILEK  263 (310)
Q Consensus       218 vi~~~g~~----~~~~~~l~~~G~~v~~g~~~~~---------------------------~~~~~~~---~~~~~~~~~  263 (310)
                      +|||+|..    ..++++++++|+++.+|.....                           ....+..   ....+.+++
T Consensus       252 vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  331 (375)
T 2vn8_A          252 ILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDD  331 (375)
T ss_dssp             EEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred             EEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHHHH
Confidence            99999853    6888999999999999854210                           1111111   113567899


Q ss_pred             HHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          264 LNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      +++++++|++++.  ++++|+++++++|++.+.+++..||+++++
T Consensus       332 ~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          332 IAELVDAGKIRPV--IEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHTTSCCCC--EEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHCCCcccC--cCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            9999999999764  358999999999999999988889999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4e-46  Score=332.76  Aligned_cols=298  Identities=23%  Similarity=0.321  Sum_probs=246.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||++++.+  .+ +.++++ +.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        10 ~~a~~~~~--~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A           10 TTGWAARD--PS-GILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG--MSNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             EEEEEECS--TT-CCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTT--CCCSSBCCCCEEEEEEEEECSSCC
T ss_pred             eEEEEEcc--CC-CCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCC--CCCCCeecCcceeEEEEEECCCCC
Confidence            44555544  33 458998 8999999999999999999999999999988653  246799999999999999999999


Q ss_pred             CCCCCCeeEeecC------------cc---------cc-----CCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628           81 KFKVGDEVYGDIN------------EK---------AL-----DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (310)
Q Consensus        81 ~~~~Gd~V~~~~~------------~~---------~~-----~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (310)
                      ++++||||++.+.            +.         ..     .+....|+|+||+++|.+.++++|+++++++||.+++
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            9999999975321            00         00     0122479999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhcccC-CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCc-cccc
Q 021628          135 ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN-IEDL  211 (310)
Q Consensus       135 ~~~ta~~al~~~~~~-~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~  211 (310)
                      ++.|||++++..+++ +|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++ ++|+++++++.+.+ ....
T Consensus       164 ~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  241 (357)
T 2cf5_A          164 AGVTVYSPLSHFGLKQPGLRGGILG-LGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSEL  241 (357)
T ss_dssp             HHHHHHHHHHHTSTTSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHS
T ss_pred             hHHHHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHh
Confidence            999999999878888 999999999 699999999999996 999999999999999887 99999998876532 2233


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCc----------eEEEE--ecCHHHHHHHHHHHHcCCeeEE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPA----------SSFVL--TSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      .+++|+|||++|.   ++.++++++++|+++.+|....+..          ..+..  ....+++++++++++++++++.
T Consensus       242 ~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  321 (357)
T 2cf5_A          242 ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI  321 (357)
T ss_dssp             TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc
Confidence            4589999999983   5899999999999999986542211          11211  1235789999999999999875


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .   ++|+++++++|++.+.+++..+|++++++
T Consensus       322 ~---~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          322 I---EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             E---EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             e---EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            2   68999999999999999888899999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-46  Score=337.40  Aligned_cols=298  Identities=20%  Similarity=0.262  Sum_probs=247.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHH-HHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.+++++   ++++ +.|.|++++|||+|||.+++||++|++ .+.|.++   ..+|.++|||++|+|+++|+++
T Consensus         9 mka~~~~~~~~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~---~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            9 CKAAVAWEANKP---LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK---DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT---TSCSEECCCCEEEEEEEECTTC
T ss_pred             eEEEEEecCCCC---eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC---CCCCcccCccceEEEEEECCCC
Confidence            899999999865   6888 899999999999999999999999999 8888653   4679999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------------cc--CCC-------------CCCCcceeEEEEecCccccC
Q 021628           80 KKFKVGDEVYGDINEK------------------------AL--DHP-------------KRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------------~~--~~~-------------~~~g~~~~~~~~~~~~~~~i  120 (310)
                      +++++||||++.+...                        +.  ++.             ...|+|+||+++|.+.++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            9999999998764210                        00  000             02489999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          121 PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      |+++++++||.+++++.|||+++ +.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999998 578999999999999 699999999999996 98 788999999999999999999


Q ss_pred             EEeeCCC--Ccccc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCC-CCce---------EEEEec-
Q 021628          199 LAIDYTK--ENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVT-PPAS---------SFVLTS-  256 (310)
Q Consensus       199 ~~~~~~~--~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~-~~~~---------~~~~~~-  256 (310)
                      +++++.+  +++.+     ..+++|++||++|.   ++.++++++++ |+++.+|.... ...+         .+.... 
T Consensus       240 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~  319 (374)
T 1cdo_A          240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMF  319 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSG
T ss_pred             eEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCCeEEEEec
Confidence            9988764  23322     12389999999984   47899999999 99999986532 1100         111111 


Q ss_pred             ----CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          257 ----DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       257 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                          ..++++++++++.++++++...++++|+++++++|++.+.+++. +|++|+|
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          320 GGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence                14678999999999999865455789999999999999988776 5999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-46  Score=332.27  Aligned_cols=294  Identities=30%  Similarity=0.471  Sum_probs=247.2

Q ss_pred             CEEEEEcccCCCccceEE-eccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~-~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.++|.+ +.+++ + +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|+++
T Consensus        30 Mka~~~~~~g~~-~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           30 MRAVRVFEFGGP-EVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             EEEEEESSCSSG-GGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEECTTC
T ss_pred             EEEEEEccCCCc-ceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcCCceeEEEEEEECCCC
Confidence            899999999987 78899 7 89999999999999999999999999999987642 24679999999999999999999


Q ss_pred             CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEc
Q 021628           80 KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLG  158 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g  158 (310)
                      +++++||||++..        ...|+|+||+++|.+.++++|+++++++||.+++++.|||+++. .+++++|++|+|+|
T Consensus       107 ~~~~vGdrV~~~~--------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~G  178 (351)
T 1yb5_A          107 SAFKKGDRVFTSS--------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHG  178 (351)
T ss_dssp             TTCCTTCEEEESC--------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEET
T ss_pred             CCCCCCCEEEEeC--------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEEC
Confidence            9999999998864        12599999999999999999999999999999999999999995 78999999999999


Q ss_pred             CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCC--hHHHHh
Q 021628          159 GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       159 ~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~  230 (310)
                      ++|++|++++++++.. |++|+++++++++++.++++|++.+++..++++.+.      .+++|++|||+|.  ...+++
T Consensus       179 asggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~  257 (351)
T 1yb5_A          179 ASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLS  257 (351)
T ss_dssp             CSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHH
Confidence            8899999999999996 999999999999999999999999888766543221      2379999999984  578899


Q ss_pred             hcccCCEEEEEeCCCC---------CCceEEEEe----cCHHHH----HHHHHHHHcCCeeEEecCCcccchhhHHHHHH
Q 021628          231 AVKEGGRVVSIIGSVT---------PPASSFVLT----SDGSIL----EKLNPYFESGKVKAIIDPKGPFPFSQTLEAFS  293 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~---------~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  293 (310)
                      +++++|+++.+|....         .....+...    ...+++    +.+.+++.++++++.  ++++|+++++++|++
T Consensus       258 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~~~~~A~~  335 (351)
T 1yb5_A          258 LLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPV--IGSQYPLEKVAEAHE  335 (351)
T ss_dssp             HEEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCC--EEEEEEGGGHHHHHH
T ss_pred             hccCCCEEEEEecCCCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCc--cceEEcHHHHHHHHH
Confidence            9999999999985421         111222221    123333    455667788888764  368999999999999


Q ss_pred             H-HHcCCCCccEEEEe
Q 021628          294 H-LESSRATGKVVIHP  308 (310)
Q Consensus       294 ~-~~~~~~~~k~vi~~  308 (310)
                      . +.++...||++|++
T Consensus       336 ~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          336 NIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHSSCCSSEEEEEC
T ss_pred             HHHHhCCCCeEEEEeC
Confidence            8 56667789999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=3.1e-47  Score=339.00  Aligned_cols=300  Identities=25%  Similarity=0.313  Sum_probs=247.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhC-CCCCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLG-AFSATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.++|+.   ++++ +.|.|++++|||+||+.+++||++|++.+.| .++.....+|.++|||++|+|+++|+++
T Consensus         5 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            5 MVAIMKTKPGYG---AELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             EEEEEECSSSSS---CEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEECCCCC---EEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            899999999832   5888 8999999999999999999999999999998 4321123578999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +++++||||++.+...                  ...+....|+|+||+++|.+.++++|+++++++||++. .+.|||+
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~  159 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVD  159 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHH
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHH
Confidence            9999999998764210                  00122356999999999999999999999999999885 6779999


Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----c--CCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIED----L--PEK  214 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~--~~~  214 (310)
                      +++.+++ +|++|+|+|+ |++|++++|+|+.+ |+ +|+++++++++++.++++|+++++++.++++.+    .  ..+
T Consensus       160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g  236 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNG  236 (348)
T ss_dssp             HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred             HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCC
Confidence            9988888 9999999996 99999999999996 98 999999999999999999999999887655432    1  247


Q ss_pred             ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEEe--cC-HHHHHHHHHHHHcCCeeEEe
Q 021628          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVLT--SD-GSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~  277 (310)
                      +|+|||++|.   .+.++++++++|+++.+|....+           ....+...  .. .++++++++++++|+++...
T Consensus       237 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~  316 (348)
T 2d8a_A          237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP  316 (348)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTT
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHH
Confidence            9999999985   47899999999999999864321           11222221  12 67899999999999976554


Q ss_pred             cCCcccc-hhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          278 DPKGPFP-FSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       278 ~~~~~~~-~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .++++|+ ++++++|++.+.+ ...+|++|+++
T Consensus       317 ~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          317 IITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             TEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             hheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence            5568999 9999999999977 56789999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=6.4e-47  Score=336.30  Aligned_cols=299  Identities=25%  Similarity=0.304  Sum_probs=248.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |||+++.++|++   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ....+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   76 (343)
T 2dq4_A            1 MRALAKLAPEEG---LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGV   76 (343)
T ss_dssp             CEEEEECSSSSS---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEeCCCCc---EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCC
Confidence            999999999974   5888 99999999999999999999999999999886521 013578999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINEK------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +++++||||++.+...                  ...+....|+|+||+++|.+.++++|+++++++|+++ ..+.|||+
T Consensus        77 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~  155 (343)
T 2dq4_A           77 RRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVH  155 (343)
T ss_dssp             CSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHH
T ss_pred             CcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHH
Confidence            9999999999853210                  0012234799999999999999999999999999887 45678999


Q ss_pred             HHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCccccc-----CCC
Q 021628          142 GLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEK  214 (310)
Q Consensus       142 al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~  214 (310)
                      ++. .+++ +|++|+|+|+ |++|++++|+|+.+ |+ +|+++++++++++.++++ +++++++.++++.+.     ..+
T Consensus       156 ~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g  231 (343)
T 2dq4_A          156 TVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSG  231 (343)
T ss_dssp             HHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSC
T ss_pred             HHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCC
Confidence            997 8889 9999999996 99999999999996 98 999999999999999999 999998876554321     358


Q ss_pred             ccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC-----------ceEEEEe--c-CHHHHHHHHHHHHcCCeeEEe
Q 021628          215 FDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP-----------ASSFVLT--S-DGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       215 ~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      +|+|||++|.   .+.++++++++|+++.+|......           ...+...  . ..++++++++++++++++...
T Consensus       232 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~  311 (343)
T 2dq4_A          232 VEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSP  311 (343)
T ss_dssp             EEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGG
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHH
Confidence            9999999985   478999999999999998643211           1122211  1 357799999999999976544


Q ss_pred             cCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          278 DPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .++++|+++++++|++.+.+++. +|++++++
T Consensus       312 ~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          312 LLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             GEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             heeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            55789999999999999988887 99999875

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=5.3e-47  Score=337.63  Aligned_cols=294  Identities=22%  Similarity=0.274  Sum_probs=243.2

Q ss_pred             CEEEEEc--ccC-CCccceEEeccc---------cCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccce
Q 021628            1 MKAWVYK--EYG-NSQSVLKFETNV---------EVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDV   68 (310)
Q Consensus         1 mka~~~~--~~g-~~~~~l~~~~~~---------~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~   68 (310)
                      |||+++.  +++ .+ +.++++ +.         |.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||+
T Consensus        11 mka~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~p~v~G~E~   87 (349)
T 3pi7_A           11 MKALLLVGDGYTKTP-SGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ-PRVKGRPAGFEG   87 (349)
T ss_dssp             EEEEEECSCBSCSSC-CCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS-CBCTTSBCCSEE
T ss_pred             heEEEEEccccCCCc-ccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC-CCCCCCCccceE
Confidence            8999999  553 33 567888 88         999999999999999999999999999997642 346899999999


Q ss_pred             eEEEEEeCCCC-CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcc
Q 021628           69 AGVVEKVGSQV-KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSA  147 (310)
Q Consensus        69 ~G~V~~~g~~~-~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~  147 (310)
                      +|+|+++|+++ +++++||+|++..      +....|+|+||+++|.+.++++|+++++++||.+++.++|||++++.++
T Consensus        88 ~G~V~~vG~~v~~~~~vGdrV~~~~------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~  161 (349)
T 3pi7_A           88 VGTIVAGGDEPYAKSLVGKRVAFAT------GLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK  161 (349)
T ss_dssp             EEEEEEECSSHHHHHHTTCEEEEEC------TTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCccCCCCCCCEEEEec------cCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHh
Confidence            99999999999 8999999999874      1234799999999999999999999999999999999999997777666


Q ss_pred             cCCC-CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEe
Q 021628          148 FSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFD  220 (310)
Q Consensus       148 ~~~g-~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~  220 (310)
                       ++| ++|+|+|++|++|++++|+|+.+ |++|+++++++++++.++++|++++++++++++.+.      .+++|++||
T Consensus       162 -~~g~~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid  239 (349)
T 3pi7_A          162 -QEGEKAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD  239 (349)
T ss_dssp             -HHCCSEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             -hCCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence             666 79999988999999999999996 999999999999999999999999999877665332      148999999


Q ss_pred             CCCC--hHHHHhhcccCCEEEEEeCCCC-----CC-------ceEEEEec-----------CHHHHHHHHHHHHcCCeeE
Q 021628          221 AVGQ--CDKALKAVKEGGRVVSIIGSVT-----PP-------ASSFVLTS-----------DGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       221 ~~g~--~~~~~~~l~~~G~~v~~g~~~~-----~~-------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~  275 (310)
                      |+|.  ...++++++++|+++.+|....     +.       ...+....           ..+.++++++++++|++++
T Consensus       240 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  319 (349)
T 3pi7_A          240 AVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWST  319 (349)
T ss_dssp             SSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC
T ss_pred             CCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCccc
Confidence            9984  5789999999999999985431     11       11222111           0355778889999999976


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .  ++++|+++++++|++. .++...||++|++
T Consensus       320 ~--i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          320 D--VTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             ---CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             c--cceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            4  5799999999999994 4455678999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=4.6e-47  Score=337.37  Aligned_cols=296  Identities=27%  Similarity=0.353  Sum_probs=227.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|+.   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++.....+|.++|||++|+|+++|++ +
T Consensus         4 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~   78 (344)
T 2h6e_A            4 SKAALLKKFSEP---LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-A   78 (344)
T ss_dssp             EEBCEECSCCC---------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-C
T ss_pred             eEEEEEecCCCC---CeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-C
Confidence            899999999854   6888 8999999999999999999999999999998764213467999999999999999999 9


Q ss_pred             CCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEe-cCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVE-ENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||+.....                  ....+....|+|+||+++| .+.++++ +++++++||.+++++.|||+
T Consensus        79 ~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~  157 (344)
T 2h6e_A           79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMG  157 (344)
T ss_dssp             CCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHH
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHH
Confidence            99999999765321                  0011123479999999999 9999999 99999999999999999999


Q ss_pred             HHHhc-----ccCCCCEEEEEcCCcchHHHHHHHHHhhc--CCcEEEEecChhhHHHHHHcCCCEEeeCCC-Cccc-cc-
Q 021628          142 GLERS-----AFSAGKSILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIE-DL-  211 (310)
Q Consensus       142 al~~~-----~~~~g~~vlI~g~~g~~G~~a~~la~~~~--g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-~~-  211 (310)
                      +++..     ++ +|++|+|+|+ |++|++++|+|+. .  |++|+++++++++++.++++|+++++++.+ ++.. .. 
T Consensus       158 al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~-~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~  234 (344)
T 2h6e_A          158 AIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKA-LMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT  234 (344)
T ss_dssp             HHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHH-HCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH
T ss_pred             HHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh
Confidence            99755     88 9999999996 9999999999998 5  889999999999999999999999988654 3321 11 


Q ss_pred             -CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEE--ecCHHHHHHHHHHHHcCCeeE
Q 021628          212 -PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVL--TSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       212 -~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~  275 (310)
                       ..++|+|||++|.   .+.++++++++|+++.+|......          ...+..  ....++++++++++.++++++
T Consensus       235 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~  314 (344)
T 2h6e_A          235 DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKP  314 (344)
T ss_dssp             TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCC
T ss_pred             cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCCCCc
Confidence             3389999999984   478999999999999998653211          112221  123678999999999999987


Q ss_pred             EecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          276 IIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       276 ~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .  + ++|+++++++|++.+.+++..||++|++
T Consensus       315 ~--i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          315 Y--I-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             C--E-EEECC----------------CEEEECC
T ss_pred             c--e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            5  3 7999999999999999888889999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=8.2e-46  Score=329.68  Aligned_cols=300  Identities=28%  Similarity=0.382  Sum_probs=251.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC------CCCCCCcccccceeEEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------TDSPLPTIPGYDVAGVVEK   74 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~   74 (310)
                      |||+++.++|++   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++.      ....+|.++|||++|+|++
T Consensus         1 Mka~~~~~~g~~---l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~   76 (347)
T 1jvb_A            1 MRAVRLVEIGKP---LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE   76 (347)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEE
T ss_pred             CeEEEEecCCCC---eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEE
Confidence            999999999854   6888 89999999999999999999999999999886531      1246799999999999999


Q ss_pred             eCCCCCCCCCCCeeEeecCc-----------c-------ccCCCCCCCcceeEEEEec-CccccCCCCCChhhhccccch
Q 021628           75 VGSQVKKFKVGDEVYGDINE-----------K-------ALDHPKRNGSLAEYTAVEE-NLLALKPKNLSFVEAASLPLA  135 (310)
Q Consensus        75 ~g~~~~~~~~Gd~V~~~~~~-----------~-------~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~~~~aa~~~~~  135 (310)
                      +|++++++++||||+..+..           .       ...+....|+|+||+++|. +.++++ +++++++|+.++++
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~  155 (347)
T 1jvb_A           77 VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCS  155 (347)
T ss_dssp             ECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTH
T ss_pred             ECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhh
Confidence            99999999999999764310           0       0012234699999999999 999999 99999999999999


Q ss_pred             HHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc----ccc
Q 021628          136 TETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI----EDL  211 (310)
Q Consensus       136 ~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~  211 (310)
                      +.|||++++.+++++|++|+|+|+.|++|++++++++..+|++|+++++++++++.++++|++++++..+++.    ...
T Consensus       156 ~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          156 GITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHH
Confidence            9999999988999999999999987799999999999832899999999999999999999999888766543    122


Q ss_pred             C--CCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-CCCce----------EEEE--ecCHHHHHHHHHHHHcCCe
Q 021628          212 P--EKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPPAS----------SFVL--TSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       212 ~--~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~~  273 (310)
                      .  +++|++||++|.   ++.++++++++|+++.+|... .+ .+          .+..  ....+++++++++++++++
T Consensus       236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  314 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKV  314 (347)
T ss_dssp             TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTTSS
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcCCC
Confidence            2  489999999984   478899999999999998654 22 11          1211  1235789999999999999


Q ss_pred             eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          274 KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       274 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      ++.  ++++|+++++++|++.+.+++..||++|++
T Consensus       315 ~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          315 KPM--ITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             CCC--CEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             Cce--EEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            753  568999999999999999988889999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.1e-45  Score=331.59  Aligned_cols=297  Identities=25%  Similarity=0.315  Sum_probs=241.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.    +++.+.|.|++++|||+||+.+++||++|++.+.+.     ..+|.++|||++|+|+++|++++
T Consensus        12 mkA~v~~~~~~l----~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~p~v~G~e~~G~V~~vG~~v~   82 (371)
T 3gqv_A           12 QTALTVNDHDEV----TVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF-----ATPWAFLGTDYAGTVVAVGSDVT   82 (371)
T ss_dssp             EEEEEECTTSCE----EEEEEECCCCCCTTSEEEEEEEEECCGGGGC----------CCTTSCCCSEEEEEEEEECTTCC
T ss_pred             ceeEEEcCCCce----EEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC-----CCCCccCccccEEEEEEeCCCCC
Confidence            899999998765    775368999999999999999999999999988763     24689999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-Hh-ccc----------
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ER-SAF----------  148 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~-~~~----------  148 (310)
                      ++++||||++.+.... .+....|+|+||+++|...++++|+++++++|+.+++++.|||+++ +. .++          
T Consensus        83 ~~~~GdrV~~~~~~~~-~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~  161 (371)
T 3gqv_A           83 HIQVGDRVYGAQNEMC-PRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPT  161 (371)
T ss_dssp             SCCTTCEEEEECCTTC-TTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCC
T ss_pred             CCCCCCEEEEeccCCC-CCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccc
Confidence            9999999998754222 1223479999999999999999999999999999999999999999 45 442          


Q ss_pred             -CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCC
Q 021628          149 -SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAV  222 (310)
Q Consensus       149 -~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~  222 (310)
                       ++|++|+|+|++|++|++++|+|+.+ |++|++++ +++|++.++++|+++++++.++++.+     ..+++|++|||+
T Consensus       162 ~~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~  239 (371)
T 3gqv_A          162 HSKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI  239 (371)
T ss_dssp             CSSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESS
T ss_pred             cCCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECC
Confidence             89999999998899999999999996 99998886 78999999999999999987766533     134699999999


Q ss_pred             CC---hHHHHhhc-ccCCEEEEEeCCCC----CCceEEEE-------------------ecCH-------HHHHHHHHHH
Q 021628          223 GQ---CDKALKAV-KEGGRVVSIIGSVT----PPASSFVL-------------------TSDG-------SILEKLNPYF  268 (310)
Q Consensus       223 g~---~~~~~~~l-~~~G~~v~~g~~~~----~~~~~~~~-------------------~~~~-------~~~~~~~~~~  268 (310)
                      |.   .+.++++| +++|+++.+|....    ........                   ....       +.++++++++
T Consensus       240 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~  319 (371)
T 3gqv_A          240 TNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLV  319 (371)
T ss_dssp             CSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            85   47889999 59999999985432    11121111                   0011       2345888999


Q ss_pred             HcCCeeEEecCCcccchhhHHHHHHHHHcCCCCcc-EEEEeC
Q 021628          269 ESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGK-VVIHPI  309 (310)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k-~vi~~~  309 (310)
                      ++|++++....++.|+++++++|++.+.+++..|| ++++++
T Consensus       320 ~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~  361 (371)
T 3gqv_A          320 EDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLE  361 (371)
T ss_dssp             HTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEEC
T ss_pred             HCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeC
Confidence            99999987666677999999999999999988875 555543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.6e-45  Score=329.83  Aligned_cols=300  Identities=21%  Similarity=0.268  Sum_probs=248.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      ||+..+..++.. +.++++ +.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++|++++
T Consensus        15 mk~~~~~~~~~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~P~v~GhE~~G~V~~vG~~V~   90 (366)
T 1yqd_A           15 VKAFGWAARDQS-GHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWG--FSMYPLVPGHEIVGEVTEVGSKVK   90 (366)
T ss_dssp             EEEEEEEECSTT-CCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSS--CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             eeEEEEEEcCCC-CCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCC--CCCCCEecccceEEEEEEECCCCC
Confidence            677777766655 668999 8999999999999999999999999999998653  245799999999999999999999


Q ss_pred             CCCCCCeeEeecC------------cc---------cc-----CCCCCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628           81 KFKVGDEVYGDIN------------EK---------AL-----DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (310)
Q Consensus        81 ~~~~Gd~V~~~~~------------~~---------~~-----~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (310)
                      ++++||||++.+.            +.         ..     .+....|+|+||+++|...++++|+++++++||.+++
T Consensus        91 ~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  170 (366)
T 1yqd_A           91 KVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLC  170 (366)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGT
T ss_pred             cCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhh
Confidence            9999999985321            00         00     0112469999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhcccC-CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCc-cccc
Q 021628          135 ATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN-IEDL  211 (310)
Q Consensus       135 ~~~ta~~al~~~~~~-~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~  211 (310)
                      ++.|||++++..+++ +|++|+|+| +|++|++++|+|+.+ |++|+++++++++++.++ ++|+++++++.+.+ ....
T Consensus       171 ~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~  248 (366)
T 1yqd_A          171 AGITVYSPLKYFGLDEPGKHIGIVG-LGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAA  248 (366)
T ss_dssp             HHHHHHHHHHHTTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHT
T ss_pred             hHHHHHHHHHhcCcCCCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHh
Confidence            999999999877888 999999999 699999999999996 999999999999998886 89999998876532 2233


Q ss_pred             CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCC----------ceEEEEe--cCHHHHHHHHHHHHcCCeeEE
Q 021628          212 PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPP----------ASSFVLT--SDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       212 ~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      .+++|+|||++|.   ++.++++++++|+++.+|....+.          ...+...  ...+++.++++++.++++++.
T Consensus       249 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  328 (366)
T 1yqd_A          249 AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITAD  328 (366)
T ss_dssp             TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred             hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCc
Confidence            4589999999983   589999999999999998654221          1122211  135678999999999999875


Q ss_pred             ecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          277 IDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       277 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      +   ++|+++++++|++.+.+++..+|++++++
T Consensus       329 ~---~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          329 I---EVISTDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             E---EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             e---EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence            3   68999999999999999988899999763

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.9e-46  Score=333.94  Aligned_cols=295  Identities=19%  Similarity=0.271  Sum_probs=242.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCC--CCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCC---------ccccccee
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR--EDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP---------TIPGYDVA   69 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~--~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p---------~~~G~e~~   69 (310)
                      |||+++.++|++.+.++++ +.|.|+++  +|||+|||.+++||++|++.+.|.++. ...+|         .++|||++
T Consensus         4 mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            4 AQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS-KPAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC-CCCCBSTTCCSSCBEECCSCCE
T ss_pred             EEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC-CCCCCccccccCcccccCceeE
Confidence            8999999998742346888 88888776  999999999999999999999987642 13456         89999999


Q ss_pred             EEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCC-----------CCChhhhccccchHHH
Q 021628           70 GVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPK-----------NLSFVEAASLPLATET  138 (310)
Q Consensus        70 G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~-----------~~~~~~aa~~~~~~~t  138 (310)
                      |+|+++|++++++++||+|++...        ..|+|+||+++|.+.++++|+           ++++++||+++++++|
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~--------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~t  153 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSHV--------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLT  153 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSS--------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHH
T ss_pred             EEEEEeCCCCCcCCCCCEEEecCC--------CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHH
Confidence            999999999999999999998641        369999999999999999998           8999999999999999


Q ss_pred             HHHHHHh-cccCCC-CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh----HHHHHHcCCCEEeeCCC---Cccc
Q 021628          139 AYEGLER-SAFSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK----LDLLRSLGADLAIDYTK---ENIE  209 (310)
Q Consensus       139 a~~al~~-~~~~~g-~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~----~~~~~~~g~~~~~~~~~---~~~~  209 (310)
                      ||+++.. +++++| ++|+|+|++|++|++++|+|+.+ |+++++++++.++    ++.++++|+++++++++   +++.
T Consensus       154 a~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~  232 (364)
T 1gu7_A          154 AYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFG  232 (364)
T ss_dssp             HHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGH
T ss_pred             HHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHH
Confidence            9999965 699999 99999998899999999999996 9999988876554    67778999999988753   3322


Q ss_pred             c--------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC-C----------CceEEEEec-C----------
Q 021628          210 D--------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-P----------PASSFVLTS-D----------  257 (310)
Q Consensus       210 ~--------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~-~----------~~~~~~~~~-~----------  257 (310)
                      +        ...++|+||||+|.  ...++++++++|+++.+|.... .          ....+.... .          
T Consensus       233 ~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  312 (364)
T 1gu7_A          233 PTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELK  312 (364)
T ss_dssp             HHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHH
T ss_pred             HHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHH
Confidence            1        13589999999984  3578899999999999986431 1          111222111 0          


Q ss_pred             HHHHHHHHHHHHcCCeeEEecCCcccch---hhHHHHHHHHHcCCCCccEEEEe
Q 021628          258 GSILEKLNPYFESGKVKAIIDPKGPFPF---SQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .++++++++++++|++++.+.  .+|++   +++++|++.+.+++..||+++++
T Consensus       313 ~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          313 TSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            256889999999999987644  45555   59999999998888889999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.8e-45  Score=329.08  Aligned_cols=294  Identities=26%  Similarity=0.365  Sum_probs=248.3

Q ss_pred             CEEEEEcccCCC-ccceEE-eccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            1 MKAWVYKEYGNS-QSVLKF-ETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         1 mka~~~~~~g~~-~~~l~~-~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      |||+++.++|.. .+.+++ + +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++
T Consensus        24 MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~~P~i~G~E~~G~V~~vG~~  101 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP-SVKPPFDIGFEGIGEVVALGLS  101 (362)
T ss_dssp             EEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT-TCCSCEECCSEEEEEEEEECTT
T ss_pred             ceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC-CCCCCCCCCceeEEEEEEECCC
Confidence            899999998852 135788 8 89999999999999999999999999999987632 2467999999999999999999


Q ss_pred             CC-CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEE
Q 021628           79 VK-KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILV  156 (310)
Q Consensus        79 ~~-~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI  156 (310)
                      ++ ++++||||++..          .|+|+||+++|.+.++++|+. + .++++++++++|||+++ +.+++++|++|+|
T Consensus       102 V~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV  169 (362)
T 2c0c_A          102 ASARYTVGQAVAYMA----------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV  169 (362)
T ss_dssp             GGGTCCTTCEEEEEC----------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE
T ss_pred             ccCCCCCCCEEEEcc----------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE
Confidence            99 999999999864          599999999999999999996 4 46778888999999999 4689999999999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc-----cCCCccEEEeCCCC--hHHHH
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVGQ--CDKAL  229 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g~--~~~~~  229 (310)
                      +|++|++|++++|+|+.. |++|+++++++++++.++++|++.++++.++++.+     ...++|++|||+|.  .+.++
T Consensus       170 ~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~  248 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAV  248 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHH
Confidence            999999999999999996 99999999999999999999999999877655422     13579999999985  57899


Q ss_pred             hhcccCCEEEEEeCCCC-C-----------C--------ceEEEEec-------CHHHHHHHHHHHHcCCeeEEec----
Q 021628          230 KAVKEGGRVVSIIGSVT-P-----------P--------ASSFVLTS-------DGSILEKLNPYFESGKVKAIID----  278 (310)
Q Consensus       230 ~~l~~~G~~v~~g~~~~-~-----------~--------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----  278 (310)
                      ++++++|+++.+|.... .           .        ...+....       ..++++++++++++|++++.+.    
T Consensus       249 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  328 (362)
T 2c0c_A          249 DALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDL  328 (362)
T ss_dssp             HHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTT
T ss_pred             HHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccc
Confidence            99999999999985421 0           0        11121111       1356899999999999987654    


Q ss_pred             --CCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          279 --PKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       279 --~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                        +++.|+++++++|++.+.+++..||+++++.
T Consensus       329 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          329 SPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             STTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             cccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence              4567899999999999998888899999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=3.8e-46  Score=333.85  Aligned_cols=299  Identities=20%  Similarity=0.217  Sum_probs=242.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCC--------CCCCCcEEEEEeEeecCHHHHHHHhCC-CCCCCCCCCcccccceeEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVP--------SLREDQVLIKVVAAALNPIDFKRMLGA-FSATDSPLPTIPGYDVAGV   71 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~--------~~~~~eV~V~v~~~~i~~~d~~~~~g~-~~~~~~~~p~~~G~e~~G~   71 (310)
                      |||+++.+++++    +++ +.|.|        ++++|||+||+.+++||++|++.+.+. ++.....+|.++|||++|+
T Consensus         9 mka~~~~~~~~l----~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            9 NIGVFTNPQHDL----WIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CEEEEECTTCCE----EEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             ceeEEEeCCCcE----EEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            899999987665    999 99999        999999999999999999999998743 2223356799999999999


Q ss_pred             EEEeCCCCCCCCCCCeeEeecCc------------------ccc-CCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           72 VEKVGSQVKKFKVGDEVYGDINE------------------KAL-DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        72 V~~~g~~~~~~~~Gd~V~~~~~~------------------~~~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                      |+++|++++++++||||++.+..                  ... ......|+|+||+++|.+.++++|+ +++++||++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~  162 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML  162 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh
Confidence            99999999999999999875310                  001 1112579999999999999999999 999999988


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCC-----CC
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYT-----KE  206 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~-----~~  206 (310)
                       ..+.|||++++.+++++|++|||+|+ |++|++++|+|+.+ |++ |++++.+++|+++++++ ++.++++.     .+
T Consensus       163 -~~~~ta~~~l~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~  238 (363)
T 3m6i_A          163 -EPLSVALAGLQRAGVRLGDPVLICGA-GPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAE  238 (363)
T ss_dssp             -HHHHHHHHHHHHHTCCTTCCEEEECC-SHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHH
T ss_pred             -hHHHHHHHHHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chhcccccccccchH
Confidence             47789999998899999999999995 99999999999996 987 88999999999999999 65444332     12


Q ss_pred             cccc------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCCCCce----------EEEE-ecCHHHHHHHHH
Q 021628          207 NIED------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVTPPAS----------SFVL-TSDGSILEKLNP  266 (310)
Q Consensus       207 ~~~~------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~~~~~----------~~~~-~~~~~~~~~~~~  266 (310)
                      ++.+      ..+++|+|||++|.   ++.++++++++|+++.+|.......+          .+.. ....++++++++
T Consensus       239 ~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  318 (363)
T 3m6i_A          239 ESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIR  318 (363)
T ss_dssp             HHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHH
Confidence            2211      13489999999985   47899999999999999865422111          1111 112567899999


Q ss_pred             HHHcCCeeEEecCCcccchhhHHHHHHHHHcC-CCCccEEEEeC
Q 021628          267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESS-RATGKVVIHPI  309 (310)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~k~vi~~~  309 (310)
                      ++++|++++...++++|+++++++|++.+.++ ...+|++|+.+
T Consensus       319 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  362 (363)
T 3m6i_A          319 LVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL  362 (363)
T ss_dssp             HHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred             HHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            99999997655567899999999999999887 56789999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-45  Score=332.04  Aligned_cols=297  Identities=22%  Similarity=0.303  Sum_probs=246.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|+.   ++++ +.|.|++++|||+|||.+++||++|++.+.|.++  ...+|.++|||++|+|+++| +++
T Consensus        18 mka~~~~~~g~~---l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~P~v~GhE~~G~V~~vG-~V~   90 (380)
T 1vj0_A           18 AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPLPIILGHEGAGRVVEVN-GEK   90 (380)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEES-SCC
T ss_pred             eEEEEEecCCCC---eEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCCCC--CCCCCcccCcCcEEEEEEeC-Ccc
Confidence            899999999833   5898 8999999999999999999999999999998653  24579999999999999999 998


Q ss_pred             ------CCCCCCeeEeecC------------cccc-------CCC--------CCCCcceeEEEE-ecCccccCCCCCCh
Q 021628           81 ------KFKVGDEVYGDIN------------EKAL-------DHP--------KRNGSLAEYTAV-EENLLALKPKNLSF  126 (310)
Q Consensus        81 ------~~~~Gd~V~~~~~------------~~~~-------~~~--------~~~g~~~~~~~~-~~~~~~~ip~~~~~  126 (310)
                            ++++||||++.+.            +...       .+.        ...|+|+||+++ |.+.++++|+++++
T Consensus        91 ~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~  170 (380)
T 1vj0_A           91 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDL  170 (380)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCH
T ss_pred             ccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCCh
Confidence                  8999999998531            1000       111        336999999999 99999999999999


Q ss_pred             h-hhccccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          127 V-EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       127 ~-~aa~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      + +|+++. ++.|||++++.++ +++|++|+|+| +|++|++++|+|+.+ | ++|+++++++++++.++++|+++++++
T Consensus       171 ~~~Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  247 (380)
T 1vj0_A          171 DVLAMAMC-SGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLNR  247 (380)
T ss_dssp             HHHHHHTT-HHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             HHhHhhhc-HHHHHHHHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHHHcCCcEEEec
Confidence            9 666666 8999999998888 99999999999 999999999999996 9 599999999999999999999999987


Q ss_pred             C---CCcccc----c--CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-C-CC-----------ceEEEE--ec
Q 021628          204 T---KENIED----L--PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-T-PP-----------ASSFVL--TS  256 (310)
Q Consensus       204 ~---~~~~~~----~--~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~-~~-----------~~~~~~--~~  256 (310)
                      .   ++++.+    .  ..++|+|||++|.   +..++++++++|+++.+|... . ..           ...+..  ..
T Consensus       248 ~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  327 (380)
T 1vj0_A          248 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  327 (380)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             cccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecC
Confidence            6   433221    1  2379999999983   488999999999999998654 2 11           111211  11


Q ss_pred             CHHHHHHHHHHHHc--CCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          257 DGSILEKLNPYFES--GKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       257 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      ..++++++++++++  +++++  .++++|+++++++|++.+.+++.. |++|++++
T Consensus       328 ~~~~~~~~~~l~~~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~g  380 (380)
T 1vj0_A          328 DTSHFVKTVSITSRNYQLLSK--LITHRLPLKEANKALELMESREAL-KVILYPEG  380 (380)
T ss_dssp             CHHHHHHHHHHHHTCHHHHGG--GCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC-
T ss_pred             CHHHHHHHHHHHHhhcCCeee--EEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeCC
Confidence            35789999999999  98854  457899999999999999988888 99998763

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.8e-45  Score=338.02  Aligned_cols=304  Identities=30%  Similarity=0.419  Sum_probs=246.3

Q ss_pred             CEEEEEcccC----------CCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHh----------------CCCC
Q 021628            1 MKAWVYKEYG----------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRML----------------GAFS   54 (310)
Q Consensus         1 mka~~~~~~g----------~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~----------------g~~~   54 (310)
                      |||+++.+++          .+.+.++++ +.|.|++++|||+|||.+++||++|++...                +.++
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~  103 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA  103 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGG
T ss_pred             heeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccc
Confidence            8999999988          111347999 999999999999999999999999985432                2111


Q ss_pred             CCCCCCC-cccccceeEEEEEeCCCCCCCCCCCeeEeecCcc-----------------ccCCC-CCCCcceeEEEEecC
Q 021628           55 ATDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEK-----------------ALDHP-KRNGSLAEYTAVEEN  115 (310)
Q Consensus        55 ~~~~~~p-~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~-----------------~~~~~-~~~g~~~~~~~~~~~  115 (310)
                       ....+| .++|||++|+|+++|+++.++++||||++.+...                 ...+. ...|+|+||+++|.+
T Consensus       104 -~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~  182 (447)
T 4a0s_A          104 -TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRAS  182 (447)
T ss_dssp             -GGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred             -cccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHH
Confidence             112456 6899999999999999999999999999864210                 00111 125999999999999


Q ss_pred             ccccCCCCCChhhhccccchHHHHHHHHH---hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          116 LLALKPKNLSFVEAASLPLATETAYEGLE---RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       116 ~~~~ip~~~~~~~aa~~~~~~~ta~~al~---~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .++++|+++++++||+++++++|||+++.   .+++++|++|+|+|++|++|++++|+|+.+ |++++++++++++++.+
T Consensus       183 ~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          183 QLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             GEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             HcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999993   489999999999998899999999999996 99999999999999999


Q ss_pred             HHcCCCEEeeCCCCccc-----------------------ccCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC
Q 021628          193 RSLGADLAIDYTKENIE-----------------------DLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP  247 (310)
Q Consensus       193 ~~~g~~~~~~~~~~~~~-----------------------~~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~  247 (310)
                      +++|+++++++.+.++.                       ....++|++||++|.  ++.++++++++|+++.+|.....
T Consensus       262 ~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~~  341 (447)
T 4a0s_A          262 RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGY  341 (447)
T ss_dssp             HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTTCS
T ss_pred             HhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCCCc
Confidence            99999988876543320                       014589999999984  57889999999999999865321


Q ss_pred             -Cce----------EEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          248 -PAS----------SFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       248 -~~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                       ..+          .+..  ......+.++++++++|++++.  ++++|+++++++|++.+.+++..||++|.+.
T Consensus       342 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          342 LHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPA--MSAVYPLAEAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             EEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred             ccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccc--eeEEEcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence             111          1111  1234678899999999999864  4689999999999999999999999988764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.1e-45  Score=336.23  Aligned_cols=305  Identities=25%  Similarity=0.366  Sum_probs=247.7

Q ss_pred             CEEEEEcccC------------CCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCC-------------CCC
Q 021628            1 MKAWVYKEYG------------NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGA-------------FSA   55 (310)
Q Consensus         1 mka~~~~~~g------------~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~-------------~~~   55 (310)
                      |||+++.+++            ++.+.++++ +.|.|++++|||+|||.+++||++|++...+.             ...
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~  109 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSD  109 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCH
T ss_pred             eEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcccccc
Confidence            8999999872            111457999 99999999999999999999999998765321             100


Q ss_pred             --CCCCCC-cccccceeEEEEEeCCCCCCCCCCCeeEeecCccc-----------------cCCC-CCCCcceeEEEEec
Q 021628           56 --TDSPLP-TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKA-----------------LDHP-KRNGSLAEYTAVEE  114 (310)
Q Consensus        56 --~~~~~p-~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~-----------------~~~~-~~~g~~~~~~~~~~  114 (310)
                        ....+| .++|||++|+|+++|++++++++||+|++.+....                 ..+. ...|+|+||+++|.
T Consensus       110 ~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~  189 (456)
T 3krt_A          110 LAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKS  189 (456)
T ss_dssp             HHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEG
T ss_pred             ccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEech
Confidence              012456 58999999999999999999999999987542110                 0111 12599999999999


Q ss_pred             CccccCCCCCChhhhccccchHHHHHHHHH-h--cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH
Q 021628          115 NLLALKPKNLSFVEAASLPLATETAYEGLE-R--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL  191 (310)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~  191 (310)
                      +.++++|+++++++||+++++++|||+++. .  +++++|++|+|+|++|++|++++|+|+.+ |+++++++++++|++.
T Consensus       190 ~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~  268 (456)
T 3krt_A          190 NQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEI  268 (456)
T ss_dssp             GGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHH
T ss_pred             HHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHH
Confidence            999999999999999999999999999994 2  78999999999998899999999999996 9999999999999999


Q ss_pred             HHHcCCCEEeeCCCCccc-----------------c------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC
Q 021628          192 LRSLGADLAIDYTKENIE-----------------D------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT  246 (310)
Q Consensus       192 ~~~~g~~~~~~~~~~~~~-----------------~------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~  246 (310)
                      ++++|++.++++.++++.                 +      ...++|+||||+|.  +..++++++++|+++.+|....
T Consensus       269 ~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~~  348 (456)
T 3krt_A          269 CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSG  348 (456)
T ss_dssp             HHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTTC
T ss_pred             HHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCCC
Confidence            999999999988765431                 1      12489999999984  5889999999999999986542


Q ss_pred             CC-ce----------EEEE--ecCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          247 PP-AS----------SFVL--TSDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       247 ~~-~~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .. .+          .+..  ......+.++++++++|++++.  ++++|+++++++|++.+.+++..||++|.+.
T Consensus       349 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          349 YMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPT--LSKVYSLEDTGQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             SEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred             cccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccc--eeEEEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            11 11          1111  1234667789999999999864  4689999999999999999999999988753

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=7.2e-46  Score=335.78  Aligned_cols=297  Identities=23%  Similarity=0.284  Sum_probs=245.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-CC-----CcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-RE-----DQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEK   74 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-~~-----~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~   74 (310)
                      |||+++.++++    ++++ +.|.|++ ++     |||+|||.+++||++|++.+.|.+   +..+|.++|||++|+|++
T Consensus         3 MkA~~~~~~~~----l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~---~~~~p~v~GhE~~G~V~~   74 (398)
T 2dph_A            3 NKSVVYHGTRD----LRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF---IVPKGHVLGHEITGEVVE   74 (398)
T ss_dssp             EEEEEEEETTE----EEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS---CCCTTCBCCCCEEEEEEE
T ss_pred             cEEEEEEcCCC----EEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC---CCCCCcccCCceEEEEEE
Confidence            89999998765    4888 8999987 68     999999999999999999999864   246799999999999999


Q ss_pred             eCCCCCCCCCCCeeEeecCccc--------------------------cCC---CCCCCcceeEEEEecC--ccccCCCC
Q 021628           75 VGSQVKKFKVGDEVYGDINEKA--------------------------LDH---PKRNGSLAEYTAVEEN--LLALKPKN  123 (310)
Q Consensus        75 ~g~~~~~~~~Gd~V~~~~~~~~--------------------------~~~---~~~~g~~~~~~~~~~~--~~~~ip~~  123 (310)
                      +|++++++++||||++.+....                          ..+   ....|+|+||+++|.+  .++++|++
T Consensus        75 vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~  154 (398)
T 2dph_A           75 KGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDK  154 (398)
T ss_dssp             ECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSH
T ss_pred             ECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCC
Confidence            9999999999999987431000                          001   1246999999999987  89999999


Q ss_pred             CChhh----hccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          124 LSFVE----AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       124 ~~~~~----aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      +++++    +++++++++|||++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|+++++++++++.++++|++
T Consensus       155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 2dph_A          155 EQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDAGFE  232 (398)
T ss_dssp             HHHHHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTTTCE
T ss_pred             CChhhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCc
Confidence            99988    888999999999999889999999999999 699999999999996 98 899999999999999999996


Q ss_pred             EEeeCCCCcc-ccc------CCCccEEEeCCCC-----------------hHHHHhhcccCCEEEEEeCCC--C------
Q 021628          199 LAIDYTKENI-EDL------PEKFDVVFDAVGQ-----------------CDKALKAVKEGGRVVSIIGSV--T------  246 (310)
Q Consensus       199 ~~~~~~~~~~-~~~------~~~~dvvi~~~g~-----------------~~~~~~~l~~~G~~v~~g~~~--~------  246 (310)
                       ++++.++++ .+.      ..++|+|||++|.                 ++.++++++++|+++.+|...  .      
T Consensus       233 -~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~  311 (398)
T 2dph_A          233 -TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNK  311 (398)
T ss_dssp             -EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSH
T ss_pred             -EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccc
Confidence             778766553 221      2379999999983                 478999999999999998652  1      


Q ss_pred             ---CCceEEE-----------Ee---cCHHHHHHHHHHHHcCCee--EEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          247 ---PPASSFV-----------LT---SDGSILEKLNPYFESGKVK--AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       247 ---~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                         .....+.           ..   ...++++++++++.+|+++  +...++++|+++++++|++.+.+++. +|++|+
T Consensus       312 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~  390 (398)
T 2dph_A          312 DAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVID  390 (398)
T ss_dssp             HHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEEC
T ss_pred             cccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEe
Confidence               1111211           00   1235688999999999998  65456789999999999999988887 999998


Q ss_pred             eC
Q 021628          308 PI  309 (310)
Q Consensus       308 ~~  309 (310)
                      ++
T Consensus       391 ~~  392 (398)
T 2dph_A          391 PH  392 (398)
T ss_dssp             TT
T ss_pred             cC
Confidence            75

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.4e-45  Score=332.86  Aligned_cols=300  Identities=21%  Similarity=0.279  Sum_probs=245.4

Q ss_pred             CEEEEEcccCCCcc-------------------------ceEEeccccCCC-CCCCcEEEEEeEeecCHHHHHHHhCCCC
Q 021628            1 MKAWVYKEYGNSQS-------------------------VLKFETNVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFS   54 (310)
Q Consensus         1 mka~~~~~~g~~~~-------------------------~l~~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~   54 (310)
                      |||+++.+++++ +                         .++++ +.|.|+ +++|||+|||.+++||++|++.+.|...
T Consensus         3 m~a~~~~~~~~p-~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~   80 (404)
T 3ip1_A            3 LRAVRLHAKWDP-RPEFKLGPKDIEGKLTWLGSKVWRYPEVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEE   80 (404)
T ss_dssp             EEEEEEEEEECC-CTTCCCCTTCBTTTBBSCGGGTEEEEEEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTT
T ss_pred             ceEEEecCCCCC-CCCCCCCchhhhhhhhcceEEEEeCCceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCC
Confidence            899999988888 5                         78899 999999 9999999999999999999999986421


Q ss_pred             -----CCCCCCCcccccceeEEEEEeCCCC------CCCCCCCeeEeecCc------------------cccCCCCCCCc
Q 021628           55 -----ATDSPLPTIPGYDVAGVVEKVGSQV------KKFKVGDEVYGDINE------------------KALDHPKRNGS  105 (310)
Q Consensus        55 -----~~~~~~p~~~G~e~~G~V~~~g~~~------~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~  105 (310)
                           .....+|.++|||++|+|+++|+++      ++|++||||++.+..                  ....+....|+
T Consensus        81 ~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~  160 (404)
T 3ip1_A           81 GYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGA  160 (404)
T ss_dssp             SBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCS
T ss_pred             ccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCC
Confidence                 1124689999999999999999999      889999999975321                  11122345799


Q ss_pred             ceeEEEEecCccccCCCCCC------hhhhccccchHHHHHHHHH-h-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCC
Q 021628          106 LAEYTAVEENLLALKPKNLS------FVEAASLPLATETAYEGLE-R-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA  177 (310)
Q Consensus       106 ~~~~~~~~~~~~~~ip~~~~------~~~aa~~~~~~~ta~~al~-~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~  177 (310)
                      |+||+++|.+.++++|+.++      ..++++++.++.|||+++. . +++++|++|+|+| +|++|++++|+|+.+ |+
T Consensus       161 ~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~-Ga  238 (404)
T 3ip1_A          161 FAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILG-GGPIGLAAVAILKHA-GA  238 (404)
T ss_dssp             SBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TC
T ss_pred             CcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHc-CC
Confidence            99999999999999999875      4568888889999999994 3 5899999999999 599999999999996 98


Q ss_pred             -cEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCCCh----HHHHhhc----ccCCEEEEEe
Q 021628          178 -SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQC----DKALKAV----KEGGRVVSII  242 (310)
Q Consensus       178 -~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g~~----~~~~~~l----~~~G~~v~~g  242 (310)
                       +|++++.+++|+++++++|+++++++.++++.+.      .+++|+||||+|..    ..++++|    +++|+++.+|
T Consensus       239 ~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G  318 (404)
T 3ip1_A          239 SKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA  318 (404)
T ss_dssp             SEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred             CEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence             8888889999999999999999999877664321      34799999999853    4555666    9999999998


Q ss_pred             CCCCCCc----------eEEEEe---cCHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          243 GSVTPPA----------SSFVLT---SDGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       243 ~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      .......          ..+...   ....+++++++++++| +++...++++|+++++++|++.+.    .||++|+++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~  393 (404)
T 3ip1_A          319 RADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVT  393 (404)
T ss_dssp             CCCSCEEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEE
T ss_pred             CCCCCCcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecC
Confidence            7643221          112211   1257899999999999 877666789999999999999987    468777664

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.8e-45  Score=328.52  Aligned_cols=297  Identities=21%  Similarity=0.286  Sum_probs=241.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCC-CCc------EEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLR-EDQ------VLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~-~~e------V~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (310)
                      |||+++.+++.    ++++ +.|.|+++ ++|      |+|||.+++||++|++.++|.++   ..+|.++|||++|+|+
T Consensus         3 Mka~~~~~~~~----l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~p~v~GhE~~G~V~   74 (398)
T 1kol_A            3 NRGVVYLGSGK----VEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEITGEVI   74 (398)
T ss_dssp             EEEEEEEETTE----EEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEecCCc----eEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC---CCCCcccCcccEEEEE
Confidence            89999998765    5888 89999996 898      99999999999999999998652   3578999999999999


Q ss_pred             EeCCCCCCCCCCCeeEeecCccc------------------------cCCC----CCCCcceeEEEEecC--ccccCCCC
Q 021628           74 KVGSQVKKFKVGDEVYGDINEKA------------------------LDHP----KRNGSLAEYTAVEEN--LLALKPKN  123 (310)
Q Consensus        74 ~~g~~~~~~~~Gd~V~~~~~~~~------------------------~~~~----~~~g~~~~~~~~~~~--~~~~ip~~  123 (310)
                      ++|+++++|++||||++.+....                        ..+.    ...|+|+||+++|..  .++++|++
T Consensus        75 ~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~  154 (398)
T 1kol_A           75 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  154 (398)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             EECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCC
Confidence            99999999999999986421000                        0011    235999999999986  89999999


Q ss_pred             CChhh----hccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC
Q 021628          124 LSFVE----AASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD  198 (310)
Q Consensus       124 ~~~~~----aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~  198 (310)
                      +++++    ++.+++++.|||++++.+++++|++|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|++
T Consensus       155 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 1kol_A          155 DKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGFE  232 (398)
T ss_dssp             HHHHHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCE
T ss_pred             cchhhhcccccccccHHHHHHHHHHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99887    788899999999999888999999999999 799999999999996 98 688888999999999999997


Q ss_pred             EEeeCCCCc-ccc----c--CCCccEEEeCCCC------------------hHHHHhhcccCCEEEEEeCCC--CC----
Q 021628          199 LAIDYTKEN-IED----L--PEKFDVVFDAVGQ------------------CDKALKAVKEGGRVVSIIGSV--TP----  247 (310)
Q Consensus       199 ~~~~~~~~~-~~~----~--~~~~dvvi~~~g~------------------~~~~~~~l~~~G~~v~~g~~~--~~----  247 (310)
                       ++++.+++ +.+    .  ..++|+|||++|.                  ++.++++++++|+++.+|...  .+    
T Consensus       233 -~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~  311 (398)
T 1kol_A          233 -IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVD  311 (398)
T ss_dssp             -EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSS
T ss_pred             -EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccc
Confidence             67765433 221    1  2479999999983                  468999999999999998641  10    


Q ss_pred             -------C----------ceEEEEe--cCHHHHHHHHHHHHcCCee-EEecCCcccchhhHHHHHHHHHcCCCCccEEEE
Q 021628          248 -------P----------ASSFVLT--SDGSILEKLNPYFESGKVK-AIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH  307 (310)
Q Consensus       248 -------~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~  307 (310)
                             .          ...+...  .....++++++++.+|+++ +...++++|+++++++|++.+.+++. +|++|+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~  390 (398)
T 1kol_A          312 AAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVID  390 (398)
T ss_dssp             HHHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEEC
T ss_pred             cccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEE
Confidence                   0          1112211  1235678899999999998 22345789999999999999988887 899998


Q ss_pred             eC
Q 021628          308 PI  309 (310)
Q Consensus       308 ~~  309 (310)
                      ++
T Consensus       391 ~~  392 (398)
T 1kol_A          391 PH  392 (398)
T ss_dssp             TT
T ss_pred             eC
Confidence            74

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=8.8e-44  Score=315.35  Aligned_cols=286  Identities=24%  Similarity=0.276  Sum_probs=239.9

Q ss_pred             CEEEEEcc--cC--CCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccc----eeEEE
Q 021628            1 MKAWVYKE--YG--NSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYD----VAGVV   72 (310)
Q Consensus         1 mka~~~~~--~g--~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e----~~G~V   72 (310)
                      ||+|++..  +|  .+ +.++++ +.|.|++++|||+||+.+++||++|++.+.+...   ..+|.++|||    ++|+|
T Consensus         8 mka~v~~~~~~g~~~~-~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~---~~~p~~~G~e~g~~~~G~V   82 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPGR-DTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS---YIPPVGIGEVMRALGVGKV   82 (336)
T ss_dssp             EEEEEECSCCSSSCCT-TSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC---SSCCCCTTSBCCCEEEEEE
T ss_pred             ccEEEEEecCCCCCCC-CceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc---cCCCCCCCcccCCceEEEE
Confidence            89999986  23  34 678999 9999999999999999999999999988876432   2346666776    89999


Q ss_pred             EEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhh--ccccchHHHHHHHH-HhcccC
Q 021628           73 EKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEA--ASLPLATETAYEGL-ERSAFS  149 (310)
Q Consensus        73 ~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~al-~~~~~~  149 (310)
                      ++  ++++++++||||++            .|+|+||+++|.+.++++|+++++.++  ++++++++|||+++ +.++++
T Consensus        83 ~~--~~v~~~~vGdrV~~------------~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~  148 (336)
T 4b7c_A           83 LV--SKHPGFQAGDYVNG------------ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPK  148 (336)
T ss_dssp             EE--ECSTTCCTTCEEEE------------ECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCC
T ss_pred             Ee--cCCCCCCCCCEEec------------cCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCC
Confidence            99  45888999999998            489999999999999999999977776  77899999999999 789999


Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccc-----cCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED-----LPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~-----~~~~~dvvi~~~g  223 (310)
                      +|++|+|+|++|++|++++++++.. |++|+++++++++++.+ +++|++++++..++++.+     ..+++|++|||+|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            9999999998899999999999996 99999999999999999 899999999887665432     1357999999998


Q ss_pred             C--hHHHHhhcccCCEEEEEeCCC-----C----C--------CceEEEEec-------CHHHHHHHHHHHHcCCeeEEe
Q 021628          224 Q--CDKALKAVKEGGRVVSIIGSV-----T----P--------PASSFVLTS-------DGSILEKLNPYFESGKVKAII  277 (310)
Q Consensus       224 ~--~~~~~~~l~~~G~~v~~g~~~-----~----~--------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  277 (310)
                      .  ...++++++++|+++.+|...     .    +        ....+....       ..+.++++++++.+|++++.+
T Consensus       228 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  307 (336)
T 4b7c_A          228 GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE  307 (336)
T ss_dssp             HHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE
T ss_pred             cchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence            4  588999999999999997543     0    1        111222211       136789999999999998865


Q ss_pred             cCCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          278 DPKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       278 ~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                      .  ..|+++++++|++.+.+++..||++|++
T Consensus       308 ~--~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          308 D--IVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             E--EEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             e--eecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            4  4589999999999999999999999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-44  Score=317.09  Aligned_cols=296  Identities=24%  Similarity=0.322  Sum_probs=239.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|.+ ..++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|++.  +++
T Consensus         4 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            4 FQAFVVNKTETE-FTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI-VKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             EEEEEEEEETTE-EEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS-CCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             ceEEEEecCCCc-ceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC-CCCCCcccCcceEEEEEec--CCC
Confidence            899999999865 557888 89999999999999999999999999999886532 2457999999999999995  568


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH---HhcccCCCC-EEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGK-SILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al---~~~~~~~g~-~vlI  156 (310)
                      ++++||||++.....   +....|+|+||+++|.+.++++|+++++++|+.+++++.|||.++   +..++++|+ +|+|
T Consensus        79 ~~~vGdrV~~~~~~~---g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV  155 (328)
T 1xa0_A           79 RFREGDEVIATGYEI---GVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLV  155 (328)
T ss_dssp             SCCTTCEEEEESTTB---TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEccccC---CCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEE
Confidence            899999999863211   123469999999999999999999999999999999999999887   346789997 9999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---cccc-CCCccEEEeCCCC--hHHHHh
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~dvvi~~~g~--~~~~~~  230 (310)
                      +|++|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.+.+   .... ..++|++|||+|.  ...+++
T Consensus       156 ~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  234 (328)
T 1xa0_A          156 TGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLS  234 (328)
T ss_dssp             SSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHH
T ss_pred             ecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHHHHH
Confidence            998899999999999996 99999999999999999999999998876432   1111 2479999999984  588999


Q ss_pred             hcccCCEEEEEeCCCC-C----------CceEEEEe----cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          231 AVKEGGRVVSIIGSVT-P----------PASSFVLT----SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~-~----------~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      +++++|+++.+|.... .          ....+...    ..    .+.++.+++++.++ +++.   +++|+++++++|
T Consensus       235 ~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~---~~~~~l~~~~~A  310 (328)
T 1xa0_A          235 RMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI---AQEISLAELPQA  310 (328)
T ss_dssp             TEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH---EEEEEGGGHHHH
T ss_pred             hhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee---eeEeCHHHHHHH
Confidence            9999999999986431 1          11222221    11    13456666777777 6542   489999999999


Q ss_pred             HHHHHcCCCCccEEEEeC
Q 021628          292 FSHLESSRATGKVVIHPI  309 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~~  309 (310)
                      ++.+.+++..||++|+++
T Consensus       311 ~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          311 LKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HHHHHHTCCCSEEEEECC
T ss_pred             HHHHHcCCCCCeEEEEeC
Confidence            999999888899999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.5e-45  Score=326.80  Aligned_cols=291  Identities=20%  Similarity=0.211  Sum_probs=239.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCC---CcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL---PTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~---p~~~G~e~~G~V~~~g~   77 (310)
                      |||+++.++++.   ++++ +.|.|++++|||+||+.+++||++|++.+.|.++.  ..+   |.++|||++| |+++|+
T Consensus         1 MkA~~~~~~~~~---l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~~~p~v~G~E~~G-V~~vG~   73 (357)
T 2b5w_A            1 MKAIAVKRGEDR---PVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG--FPEGEDHLVLGHEAVG-VVVDPN   73 (357)
T ss_dssp             CEEEEEETTCSS---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT--SCTTCSEEECCSEEEE-EEEECT
T ss_pred             CeEEEEeCCCCc---eEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC--CCCCCCCcccCceeEE-EEEECC
Confidence            999999999873   5888 89999999999999999999999999999987532  346   8999999999 999999


Q ss_pred             CCCCCCCCCeeEeecCcc-------------cc---C------CC-CCCCcceeEEEEecCccccCCCCCChhhhccccc
Q 021628           78 QVKKFKVGDEVYGDINEK-------------AL---D------HP-KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPL  134 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~-------------~~---~------~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  134 (310)
                      + +++++||||++.+...             ..   +      +. ...|+|+||+++|.+.++++|++++ +. |+++.
T Consensus        74 ~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~  150 (357)
T 2b5w_A           74 D-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIE  150 (357)
T ss_dssp             T-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHH
T ss_pred             C-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhc
Confidence            9 9999999998863211             00   0      11 2369999999999999999999999 54 55778


Q ss_pred             hHHHHHHHHHhcccCCC------CEEEEEcCCcchHHHH-HHHH-HhhcCCc-EEEEecChh---hHHHHHHcCCCEEee
Q 021628          135 ATETAYEGLERSAFSAG------KSILVLGGAGGVGTMV-IQLA-KHVFGAS-KVAATSSTA---KLDLLRSLGADLAID  202 (310)
Q Consensus       135 ~~~ta~~al~~~~~~~g------~~vlI~g~~g~~G~~a-~~la-~~~~g~~-vi~~~~~~~---~~~~~~~~g~~~~~~  202 (310)
                      ++.|||++++.+++++|      ++|+|+|+ |++|+++ +|+| +.+ |++ |++++++++   |++.++++|++++ +
T Consensus       151 ~~~ta~~al~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~  227 (357)
T 2b5w_A          151 PISITEKALEHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDATYV-D  227 (357)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTCEEE-E
T ss_pred             hHHHHHHHHHhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCCccc-C
Confidence            89999999988889999      99999996 9999999 9999 986 987 999999999   9999999999999 8


Q ss_pred             CCCCccccc---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC-CCC--------------ceEEEE--ecCHH
Q 021628          203 YTKENIEDL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV-TPP--------------ASSFVL--TSDGS  259 (310)
Q Consensus       203 ~~~~~~~~~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~-~~~--------------~~~~~~--~~~~~  259 (310)
                      +.++++.+.   .+++|+|||++|.   ++.++++++++|+++.+|... ...              ...+..  ....+
T Consensus       228 ~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  307 (357)
T 2b5w_A          228 SRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVE  307 (357)
T ss_dssp             TTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHH
T ss_pred             CCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHH
Confidence            776554331   2389999999984   478999999999999998654 211              111211  12367


Q ss_pred             HHHHHHHHHHcC--Ce-eEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          260 ILEKLNPYFESG--KV-KAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       260 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++++++++++++  ++ ++  .++++|+++++++|++.+   ...+|++++++
T Consensus       308 ~~~~~~~l~~~g~~~~~~~--~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~  355 (357)
T 2b5w_A          308 HFEAATVTFTKLPKWFLED--LVTGVHPLSEFEAAFDDD---DTTIKTAIEFS  355 (357)
T ss_dssp             HHHHHHHHHHHSCHHHHHH--HEEEEEEGGGGGGGGCCS---TTCCEEEEECC
T ss_pred             HHHHHHHHHHhCchhhhhh--hcceeecHHHHHHHHHHh---CCCceEEEEec
Confidence            899999999999  84 44  346899999999999988   34689999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=5e-44  Score=312.28  Aligned_cols=278  Identities=32%  Similarity=0.452  Sum_probs=235.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++   .+++ +.|.|++++|||+||+.++++|++|++.+.|.++. ...+|.++|||++|+|+       
T Consensus         1 Mka~~~~~~g~~---~~l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~e~~G~V~-------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGP---LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT-RLHPPFIPGMEVVGVVE-------   68 (302)
T ss_dssp             CEEEEECSTTSC---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCCEEEEEET-------
T ss_pred             CeEEEEcCCCCc---hheE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCcccceEEEEEE-------
Confidence            999999999987   3466 88999999999999999999999999999987642 23679999999999998       


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~  159 (310)
                          ||||++...         .|+|+||+++|.+.++++|+++++++||+++++++|||+++. .+ +++|++|+|+|+
T Consensus        69 ----GdrV~~~~~---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga  134 (302)
T 1iz0_A           69 ----GRRYAALVP---------QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAA  134 (302)
T ss_dssp             ----TEEEEEECS---------SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESST
T ss_pred             ----CcEEEEecC---------CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECC
Confidence                999998753         699999999999999999999999999999999999999995 66 999999999998


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-CcccccCCCccEEEeCCCC--hHHHHhhcccCC
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGG  236 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~dvvi~~~g~--~~~~~~~l~~~G  236 (310)
                      +|++|++++|+++.+ |++|+++++++++++.++++|+++++++.+ +++.+..+++|++|| +|.  .+.++++++++|
T Consensus       135 ~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~~~~~~~~~~l~~~G  212 (302)
T 1iz0_A          135 AGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRGKEVEESLGLLAHGG  212 (302)
T ss_dssp             TBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSCTTHHHHHTTEEEEE
T ss_pred             CcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCHHHHHHHHHhhccCC
Confidence            899999999999996 999999999999999999999999988765 444333378999999 884  588999999999


Q ss_pred             EEEEEeCCCCC-----------CceEEEEe------cCHHHHHHHHH---HHHcCCeeEEecCCcccchhhHHHHHHHHH
Q 021628          237 RVVSIIGSVTP-----------PASSFVLT------SDGSILEKLNP---YFESGKVKAIIDPKGPFPFSQTLEAFSHLE  296 (310)
Q Consensus       237 ~~v~~g~~~~~-----------~~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  296 (310)
                      +++.+|.....           ....+...      ...++++++++   ++.++++++.  ++++|+++++++|++.+.
T Consensus       213 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~  290 (302)
T 1iz0_A          213 RLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPV--VGPVFPFAEAEAAFRALL  290 (302)
T ss_dssp             EEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCC--EEEEEEGGGHHHHHHHTT
T ss_pred             EEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccc--cceEEcHHHHHHHHHHHH
Confidence            99999754311           11222221      13467889999   9999999764  468999999999999998


Q ss_pred             cCCCCccEEEEe
Q 021628          297 SSRATGKVVIHP  308 (310)
Q Consensus       297 ~~~~~~k~vi~~  308 (310)
                      +++..||+++++
T Consensus       291 ~~~~~gKvvv~~  302 (302)
T 1iz0_A          291 DRGHTGKVVVRL  302 (302)
T ss_dssp             CTTCCBEEEEEC
T ss_pred             cCCCCceEEEeC
Confidence            888889999864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.3e-44  Score=318.30  Aligned_cols=297  Identities=26%  Similarity=0.333  Sum_probs=241.4

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|.+ ..++++ +.|.|++++|||+||+.+++||++|++.+.|.++. ...+|.++|||++|+|+++  +++
T Consensus         5 mka~~~~~~g~~-~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            5 FQALQAEKNADD-VSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI-VREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             EEEEEECCGGGS-CCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT-CSSCSEECCSEEEEEEEEC--SST
T ss_pred             ceEEEEecCCCC-cceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC-cCCCCccccceEEEEEEEc--CCC
Confidence            899999998854 457899 89999999999999999999999999999886532 2457999999999999996  467


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH---HhcccCCCC-EEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL---ERSAFSAGK-SILV  156 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al---~~~~~~~g~-~vlI  156 (310)
                      ++++||||++.....   +....|+|+||+++|.+.++++|+++++++||++++++.|||.++   +..++++|+ +|+|
T Consensus        80 ~~~vGdrV~~~~~~~---g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV  156 (330)
T 1tt7_A           80 RFAEGDEVIATSYEL---GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLV  156 (330)
T ss_dssp             TCCTTCEEEEESTTB---TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             CCCCCCEEEEccccc---CCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEE
Confidence            899999999864211   123469999999999999999999999999999999999999877   346789997 9999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---cccc-CCCccEEEeCCCC--hHHHHh
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDL-PEKFDVVFDAVGQ--CDKALK  230 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~-~~~~dvvi~~~g~--~~~~~~  230 (310)
                      +|++|++|++++|+|+.+ |++|+++++++++++.++++|+++++++.+.+   .... ..++|++|||+|.  ...+++
T Consensus       157 ~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  235 (330)
T 1tt7_A          157 TGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLS  235 (330)
T ss_dssp             ESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHHHHT
T ss_pred             ECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHHHHH
Confidence            998899999999999996 99999999999999999999999988764321   1111 2479999999985  578999


Q ss_pred             hcccCCEEEEEeCCCCC-----------CceEEEEe----cC----HHHHHHHHHHHHcCCeeEEecCCcccchhhHHHH
Q 021628          231 AVKEGGRVVSIIGSVTP-----------PASSFVLT----SD----GSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEA  291 (310)
Q Consensus       231 ~l~~~G~~v~~g~~~~~-----------~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  291 (310)
                      +++++|+++.+|.....           ....+...    ..    .+.++.+++++.++++++.  ++++|+++++++|
T Consensus       236 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--i~~~~~l~~~~~A  313 (330)
T 1tt7_A          236 KIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTI--VDREVSLEETPGA  313 (330)
T ss_dssp             TEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTS--EEEEECSTTHHHH
T ss_pred             hhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccc--cceEEcHHHHHHH
Confidence            99999999999864321           11222221    01    1345666677777887653  3589999999999


Q ss_pred             HHHHHcCCCCccEEEEe
Q 021628          292 FSHLESSRATGKVVIHP  308 (310)
Q Consensus       292 ~~~~~~~~~~~k~vi~~  308 (310)
                      ++.+.+++..||++|++
T Consensus       314 ~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          314 LKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHTTTTCCSSEEEECC
T ss_pred             HHHHHcCCCCCeEEEeC
Confidence            99999888889999864

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.2e-43  Score=319.00  Aligned_cols=290  Identities=20%  Similarity=0.226  Sum_probs=234.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC-------------------------
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA-------------------------   55 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------------------------   55 (310)
                      ||++++....   ..++++ +.|.|++++|||+||+.+++||++|++.+.|.++.                         
T Consensus         8 mka~v~~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            8 LRSRIKSSGE---LELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEECTTSE---EEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             HHHHHhcCCC---CceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            7888886432   347999 99999999999999999999999999999885210                         


Q ss_pred             --CCCCCCcccccceeEEEEEeCCCC-CCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccc
Q 021628           56 --TDSPLPTIPGYDVAGVVEKVGSQV-KKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASL  132 (310)
Q Consensus        56 --~~~~~p~~~G~e~~G~V~~~g~~~-~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  132 (310)
                        ....+|.++|||++|+|+++|+++ .++++||+|++..          .|+|+||+++|.+.++++|+++++++||.+
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~----------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  153 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG----------GAMYSQYRCIPADQCLVLPEGATPADGASS  153 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC----------SCCSBSEEEEEGGGEEECCTTCCHHHHTTS
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC----------CCcceeEEEeCHHHeEECCCCCCHHHHHhh
Confidence              023578999999999999999999 7899999999965          599999999999999999999999999999


Q ss_pred             cchHHHHHHHHHhcccCCCCEEEEEc-CCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc
Q 021628          133 PLATETAYEGLERSAFSAGKSILVLG-GAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL  211 (310)
Q Consensus       133 ~~~~~ta~~al~~~~~~~g~~vlI~g-~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  211 (310)
                      +++++|||++++... ++|++|+|+| ++|++|++++|+|+.+ |++|++++++++|++.++++|+++++++.++++.+.
T Consensus       154 ~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~  231 (379)
T 3iup_A          154 FVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKD-GIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQD  231 (379)
T ss_dssp             SHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHH-TCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHH
T ss_pred             hhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHH
Confidence            999999998887666 8999999996 6999999999999996 999999999999999999999999999877665332


Q ss_pred             ------CCCccEEEeCCCC---hHHHHhhcc-----cC-----------CEEEEEeCCCC---------CCceEEEEec-
Q 021628          212 ------PEKFDVVFDAVGQ---CDKALKAVK-----EG-----------GRVVSIIGSVT---------PPASSFVLTS-  256 (310)
Q Consensus       212 ------~~~~dvvi~~~g~---~~~~~~~l~-----~~-----------G~~v~~g~~~~---------~~~~~~~~~~-  256 (310)
                            .+++|+||||+|.   .+.++++++     ++           |+++.+|....         .....+.... 
T Consensus       232 v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~  311 (379)
T 3iup_A          232 LTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMGGWLL  311 (379)
T ss_dssp             HHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEEEEECCCSCSCEEEEECCH
T ss_pred             HHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCccccccccccceEEEEEEe
Confidence                  2379999999984   367777775     44           55555543220         0111221110 


Q ss_pred             -------CH----HHHHHHHHHHHcCCeeEEecCCcccchhhH--HHHHHHHHcCCCCccEEEEeC
Q 021628          257 -------DG----SILEKLNPYFESGKVKAIIDPKGPFPFSQT--LEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       257 -------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~k~vi~~~  309 (310)
                             ..    +.++.+++++.+ .+++  .++++|+++++  ++|++.+.+++..||++|+++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~--~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          312 FPFLQKIGRERANALKQRVVAELKT-TFAS--HYSKEISLAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHTTTT-TTCC--CCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             eeecccCCHHHHHHHHHHHHHHHhc-cCCC--cceEEecHHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence                   11    224566666666 4554  45789999999  999999999999999999986

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.4e-42  Score=310.09  Aligned_cols=290  Identities=24%  Similarity=0.320  Sum_probs=240.4

Q ss_pred             CEEEEE-ccc---CCC-ccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCC----CCCCCCCCCcccccceeE
Q 021628            1 MKAWVY-KEY---GNS-QSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGA----FSATDSPLPTIPGYDVAG   70 (310)
Q Consensus         1 mka~~~-~~~---g~~-~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~----~~~~~~~~p~~~G~e~~G   70 (310)
                      ||++++ ..+   |.+ .+.++++ +.|.|++ ++|||+|||.+++||++|++.+.+.    ++ .+..+|.++|||++|
T Consensus         9 mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~-~~~~~p~v~G~E~~G   86 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYI-TPWQLSQVVDGGGIG   86 (357)
T ss_dssp             EEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSS-CCCCBTSBCEEEEEE
T ss_pred             ceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccc-CCCCCCccccccEEE
Confidence            899999 565   432 2568999 9999998 9999999999999999999877752    21 134678999999999


Q ss_pred             EEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCC-----ChhhhccccchHHHHHHHH-H
Q 021628           71 VVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNL-----SFVEAASLPLATETAYEGL-E  144 (310)
Q Consensus        71 ~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-----~~~~aa~~~~~~~ta~~al-~  144 (310)
                      +|++  ++++++++||||++.           .|+|+||+++|.+.++++|+++     +++ +++++++++|||+++ +
T Consensus        87 ~V~~--~~v~~~~vGdrV~~~-----------~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~  152 (357)
T 2zb4_A           87 IIEE--SKHTNLTKGDFVTSF-----------YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQE  152 (357)
T ss_dssp             EEEE--ECSTTCCTTCEEEEE-----------EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHH
T ss_pred             EEEe--cCCCCCCCCCEEEec-----------CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHH
Confidence            9999  888999999999986           3799999999999999999999     554 778889999999999 6


Q ss_pred             hcccCCC--CEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc-----cCCCc
Q 021628          145 RSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-LGADLAIDYTKENIED-----LPEKF  215 (310)
Q Consensus       145 ~~~~~~g--~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~  215 (310)
                      .+++++|  ++|+|+|++|++|++++++++.. |+ +|+++++++++++.+++ +|++.+++..+++..+     ..+++
T Consensus       153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV  231 (357)
T ss_dssp             HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred             hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence            8999999  99999998899999999999996 99 99999999999999876 9999988876654322     12379


Q ss_pred             cEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC-----CC---------------ceEEEEec--C-----HHHHHHHHH
Q 021628          216 DVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT-----PP---------------ASSFVLTS--D-----GSILEKLNP  266 (310)
Q Consensus       216 dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~-----~~---------------~~~~~~~~--~-----~~~~~~~~~  266 (310)
                      |++|||+|.  .+.++++++++|+++.+|....     +.               ...+....  .     .++++++++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  311 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQ  311 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHH
Confidence            999999984  5889999999999999985321     10               11222111  1     456899999


Q ss_pred             HHHcCCeeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          267 YFESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      ++.+|++++.+.  ..|+++++++|++.+.+++..||++++++
T Consensus       312 l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  352 (357)
T 2zb4_A          312 WFKEGKLKIKET--VINGLENMGAAFQSMMTGGNIGKQIVCIS  352 (357)
T ss_dssp             HHHTTCCCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEECC
T ss_pred             HHHcCCCcCccc--eecCHHHHHHHHHHHHcCCCCceEEEEEe
Confidence            999999987643  45999999999999999888899999875

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=4.8e-43  Score=340.09  Aligned_cols=285  Identities=28%  Similarity=0.395  Sum_probs=244.4

Q ss_pred             EEEEcccCCCccceEEecccc--CCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            3 AWVYKEYGNSQSVLKFETNVE--VPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         3 a~~~~~~g~~~~~l~~~~~~~--~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      .+.+..+|.+ +.|+|+ +.+  .|++++|||+|||.++|||++|++++.|.++     .|.++|||++|+|+++|++++
T Consensus       212 ~l~~~~~G~~-~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V~  284 (795)
T 3slk_A          212 RLEATRPGSL-DGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGVT  284 (795)
T ss_dssp             CEEESSTTSS-TTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSCC
T ss_pred             EEecCCCCCc-cceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCCC
Confidence            3566788888 889998 776  4678999999999999999999999998763     355799999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGG  159 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~  159 (310)
                      +|++||||+++.          .|+|++|++++...++++|+++++++||.++++++|||+++ +.+++++|++|||+|+
T Consensus       285 ~~~vGDrV~~~~----------~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~ga  354 (795)
T 3slk_A          285 GLAPGDRVMGMI----------PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSA  354 (795)
T ss_dssp             SSCTTCEEEECC----------SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEEST
T ss_pred             cCCCCCEEEEEe----------cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecC
Confidence            999999999864          59999999999999999999999999999999999999998 6799999999999999


Q ss_pred             CcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc------CCCccEEEeCCC--ChHHHHhh
Q 021628          160 AGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVG--QCDKALKA  231 (310)
Q Consensus       160 ~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~dvvi~~~g--~~~~~~~~  231 (310)
                      +|++|++++|+||.+ |++|+++++++ +.+.++ +|+++++++.+.++.+.      .+|+|+|||+.|  .+..++++
T Consensus       355 aGgvG~~aiqlAk~~-Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~  431 (795)
T 3slk_A          355 AGGVGMAAIQLARHL-GAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRM  431 (795)
T ss_dssp             TBHHHHHHHHHHHHT-TCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTS
T ss_pred             CCHHHHHHHHHHHHc-CCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHH
Confidence            999999999999996 99999998766 555555 89999998877665432      358999999987  36899999


Q ss_pred             cccCCEEEEEeCCCCC---------CceEEEEec--------CHHHHHHHHHHHHcCCeeEEecCCcccchhhHHHHHHH
Q 021628          232 VKEGGRVVSIIGSVTP---------PASSFVLTS--------DGSILEKLNPYFESGKVKAIIDPKGPFPFSQTLEAFSH  294 (310)
Q Consensus       232 l~~~G~~v~~g~~~~~---------~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  294 (310)
                      ++++|+++.+|.....         .+..+....        ..+.+++++++++++++++.  ++++|+++++++||+.
T Consensus       432 l~~~Gr~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~--~~~~~~l~~~~eA~~~  509 (795)
T 3slk_A          432 LPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL--PVTAWDVRQAPEALRH  509 (795)
T ss_dssp             CTTCEEEEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCC--CEEEEEGGGHHHHHHH
T ss_pred             hcCCCEEEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCC--cceeEcHHHHHHHHHH
Confidence            9999999999865421         223332211        13568899999999999874  5789999999999999


Q ss_pred             HHcCCCCccEEEEeC
Q 021628          295 LESSRATGKVVIHPI  309 (310)
Q Consensus       295 ~~~~~~~~k~vi~~~  309 (310)
                      +.+++..||+||++.
T Consensus       510 l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          510 LSQARHVGKLVLTMP  524 (795)
T ss_dssp             HHHTCCCBEEEEECC
T ss_pred             HhcCCccceEEEecC
Confidence            999999999999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.6e-43  Score=314.08  Aligned_cols=293  Identities=19%  Similarity=0.201  Sum_probs=233.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCC-CcEEEEEeEeecCHHHHHHHhC--CCCCCCCCC---CcccccceeEEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLRE-DQVLIKVVAAALNPIDFKRMLG--AFSATDSPL---PTIPGYDVAGVVEK   74 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g--~~~~~~~~~---p~~~G~e~~G~V~~   74 (310)
                      |||+++.++|+.   ++++ +.|.|++++ |||+|||.+++||++|++.+.|  .++  ...+   |.++|||++|+|++
T Consensus         1 MkA~~~~~~g~~---l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~~~p~v~G~E~~G~V~~   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG---VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS--TLPKGKDFLVLGHEAIGVVEE   74 (366)
T ss_dssp             CEEEEECTTSCC---CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS
T ss_pred             CeEEEEeCCCCc---eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC--CCCcCCCCCcCCcceEEEEEe
Confidence            999999999873   5888 899999999 9999999999999999999998  553  2345   89999999999999


Q ss_pred             eCCCCCCCCCCCeeEeecCcc------------------ccC--CCC-CCCcceeEEEEecCccccCCCCCChhhhcccc
Q 021628           75 VGSQVKKFKVGDEVYGDINEK------------------ALD--HPK-RNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (310)
Q Consensus        75 ~g~~~~~~~~Gd~V~~~~~~~------------------~~~--~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (310)
                        ++ +++++||||++.+...                  ...  +.. ..|+|+||+++|.+.++++|++++ ++|+ ++
T Consensus        75 --~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~  149 (366)
T 2cdc_A           75 --SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LA  149 (366)
T ss_dssp             --CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GH
T ss_pred             --CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hc
Confidence              66 8899999998753110                  000  112 469999999999999999999999 7765 67


Q ss_pred             chHHHHHHHHH-----hcccC--C-------CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh---hhHHHHHHcC
Q 021628          134 LATETAYEGLE-----RSAFS--A-------GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---AKLDLLRSLG  196 (310)
Q Consensus       134 ~~~~ta~~al~-----~~~~~--~-------g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~---~~~~~~~~~g  196 (310)
                      .++.|||+++.     .++++  +       |++|+|+|+ |++|++++|+++.+ |++|+++++++   ++++.++++|
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~g  227 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEETK  227 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHHT
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHhC
Confidence            78899999997     78888  8       999999997 99999999999996 99999999998   8999999999


Q ss_pred             CCEEeeCCCCccccc----CCCccEEEeCCCC---h-HHHHhhcccCCEEEEEeCCCCC-Cce-------------EEEE
Q 021628          197 ADLAIDYTKENIEDL----PEKFDVVFDAVGQ---C-DKALKAVKEGGRVVSIIGSVTP-PAS-------------SFVL  254 (310)
Q Consensus       197 ~~~~~~~~~~~~~~~----~~~~dvvi~~~g~---~-~~~~~~l~~~G~~v~~g~~~~~-~~~-------------~~~~  254 (310)
                      ++.+ + .+ ++.+.    ..++|++||++|.   . +.++++|+++|+++.+|..... ..+             .+..
T Consensus       228 a~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g  304 (366)
T 2cdc_A          228 TNYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG  304 (366)
T ss_dssp             CEEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE
T ss_pred             Ccee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE
Confidence            9888 7 54 33221    1579999999984   4 7889999999999999865432 111             1111


Q ss_pred             --ecCHHHHHHHHHHHHcCCee----EEecCCcccchhhHHHHHHHH-HcCCCCccEEEEeC
Q 021628          255 --TSDGSILEKLNPYFESGKVK----AIIDPKGPFPFSQTLEAFSHL-ESSRATGKVVIHPI  309 (310)
Q Consensus       255 --~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~-~~~~~~~k~vi~~~  309 (310)
                        ....++++++++++.+|+++    ....++++|+++++++|++.+ .++...+|++|+++
T Consensus       305 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          305 LVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             ecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence              11357899999999999965    333446899999999999993 33566789999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.4e-39  Score=287.91  Aligned_cols=284  Identities=24%  Similarity=0.318  Sum_probs=231.0

Q ss_pred             CEEEEEccc--CCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCC
Q 021628            1 MKAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         1 mka~~~~~~--g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      ||+|++.++  |.+ .+.++++ +.|.|++++|||+|||.+++||+.|.. +..     +..+|.++|||++|+|++.  
T Consensus         8 mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~-----~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRI-ASK-----RLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             EEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHH-HTT-----TCCTTSBCCCCEEEEEEEE--
T ss_pred             ccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHcc-ccC-----cCCCCcccccceEEEEEec--
Confidence            899999985  432 2568999 899999999999999999999998873 211     2456889999999999995  


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCC----CChhh-hccccchHHHHHHHH-HhcccCCC
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKN----LSFVE-AASLPLATETAYEGL-ERSAFSAG  151 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~----~~~~~-aa~~~~~~~ta~~al-~~~~~~~g  151 (310)
                      +++++++||||++            .|+|++|+++|.+.++++|++    +++++ +++++++++|||+++ +.+++++|
T Consensus        79 ~v~~~~vGdrV~~------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g  146 (333)
T 1v3u_A           79 KNSAFPAGSIVLA------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGG  146 (333)
T ss_dssp             SCTTSCTTCEEEE------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSS
T ss_pred             CCCCCCCCCEEEe------------cCceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCC
Confidence            5788999999998            479999999999999999997    88887 478899999999999 67899999


Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-Ccccc-----cCCCccEEEeCCCC-
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIED-----LPEKFDVVFDAVGQ-  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-----~~~~~dvvi~~~g~-  224 (310)
                      ++|+|+|++|++|++++++++.. |++|+++++++++++.++++|++.+++..+ +++.+     ..+++|++||++|. 
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~  225 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE  225 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH
T ss_pred             CEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChH
Confidence            99999998899999999999996 999999999999999999999988888765 44321     12479999999984 


Q ss_pred             -hHHHHhhcccCCEEEEEeCCCC------CC-----------ceEEEEec---C-----HHHHHHHHHHHHcCCeeEEec
Q 021628          225 -CDKALKAVKEGGRVVSIIGSVT------PP-----------ASSFVLTS---D-----GSILEKLNPYFESGKVKAIID  278 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~~------~~-----------~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~  278 (310)
                       ...++++++++|+++.+|....      +.           ...+....   .     .+.++++++++.+|++++...
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  305 (333)
T 1v3u_A          226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH  305 (333)
T ss_dssp             HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc
Confidence             5788999999999999986431      10           11111111   0     346788999999999987643


Q ss_pred             CCcccchhhHHHHHHHHHcCCCCccEEEEe
Q 021628          279 PKGPFPFSQTLEAFSHLESSRATGKVVIHP  308 (310)
Q Consensus       279 ~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~  308 (310)
                        ..|+++++++|++.+.+++..||+++++
T Consensus       306 --~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          306 --VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             --EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             --cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence              3579999999999999988889999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.3e-38  Score=283.24  Aligned_cols=292  Identities=25%  Similarity=0.332  Sum_probs=230.9

Q ss_pred             CEEEEEccc--CCCcc--ceEEec-cccCCC-CCCCcEEEEEeEeecCHHHHHHHhCCCCCCC--CCCCcccccceeEEE
Q 021628            1 MKAWVYKEY--GNSQS--VLKFET-NVEVPS-LREDQVLIKVVAAALNPIDFKRMLGAFSATD--SPLPTIPGYDVAGVV   72 (310)
Q Consensus         1 mka~~~~~~--g~~~~--~l~~~~-~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~--~~~p~~~G~e~~G~V   72 (310)
                      ||++++...  +.+ +  .++++. +.|.|. +++|||+||+.++++++.|. ...|.+....  ..+|.++|||++|++
T Consensus         5 mka~~m~a~~~~~p-~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~   82 (345)
T 2j3h_A            5 NKQVILKDYVSGFP-TESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYG   82 (345)
T ss_dssp             EEEEEECSCBSSSC-CGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEE
T ss_pred             ceEEEEecCCCCCC-CccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecce
Confidence            699998876  655 4  577752 467776 89999999999999887764 4555432111  246889999999999


Q ss_pred             EE--eCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCc--cccCCC---CCChhhhccccchHHHHHHHH-H
Q 021628           73 EK--VGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENL--LALKPK---NLSFVEAASLPLATETAYEGL-E  144 (310)
Q Consensus        73 ~~--~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~ip~---~~~~~~aa~~~~~~~ta~~al-~  144 (310)
                      ++  +|++++++++||||++.            |+|++|++++...  ++++|+   .++++ +++++++++|||+++ +
T Consensus        83 ~~GvV~~~v~~~~vGdrV~~~------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~  149 (345)
T 2j3h_A           83 VSRIIESGHPDYKKGDLLWGI------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYE  149 (345)
T ss_dssp             EEEEEEECSTTCCTTCEEEEE------------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHT
T ss_pred             EEEEEecCCCCCCCCCEEEee------------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHH
Confidence            99  99999999999999884            7899999999876  999996   35555 677888999999999 6


Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCC-cccc-----cCCCccE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKE-NIED-----LPEKFDV  217 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~-----~~~~~dv  217 (310)
                      .+++++|++|+|+|++|++|++++++++.. |++|+++++++++++.++ ++|++.+++..+. ++..     ..+++|+
T Consensus       150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~  228 (345)
T 2j3h_A          150 VCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDI  228 (345)
T ss_dssp             TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEE
T ss_pred             HhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcE
Confidence            789999999999998899999999999996 999999999999999997 7999988887543 3321     1247999


Q ss_pred             EEeCCCC--hHHHHhhcccCCEEEEEeCCCC------CC----------ceEEEEec-------CHHHHHHHHHHHHcCC
Q 021628          218 VFDAVGQ--CDKALKAVKEGGRVVSIIGSVT------PP----------ASSFVLTS-------DGSILEKLNPYFESGK  272 (310)
Q Consensus       218 vi~~~g~--~~~~~~~l~~~G~~v~~g~~~~------~~----------~~~~~~~~-------~~~~~~~~~~~~~~~~  272 (310)
                      +||++|.  .+.++++++++|+++.+|....      ..          ...+....       ..+.++++++++.+|+
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~  308 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGK  308 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTS
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCC
Confidence            9999984  5788999999999999975321      00          01111111       0234889999999999


Q ss_pred             eeEEecCCcccchhhHHHHHHHHHcCCCCccEEEEeCC
Q 021628          273 VKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP  310 (310)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~vi~~~~  310 (310)
                      +++..  .+.|+++++++|++.+.+++..||+++++++
T Consensus       309 i~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          309 ITYVE--DVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             SCCCE--EEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             CcCcc--cccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            98642  3579999999999999999989999998753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=6e-31  Score=279.41  Aligned_cols=280  Identities=22%  Similarity=0.292  Sum_probs=224.5

Q ss_pred             EcccCCCccceEEeccccCCC-C--CCCcEEEEEeEeecCHHHHHHHhCCCCCC-----CCCCCcccccceeEEEEEeCC
Q 021628            6 YKEYGNSQSVLKFETNVEVPS-L--REDQVLIKVVAAALNPIDFKRMLGAFSAT-----DSPLPTIPGYDVAGVVEKVGS   77 (310)
Q Consensus         6 ~~~~g~~~~~l~~~~~~~~~~-~--~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-----~~~~p~~~G~e~~G~V~~~g~   77 (310)
                      ...+|.+ +.+.|. +.+... +  .++||+|+|.++++|++|+++..|.++..     ....|.++|+|++|+|.    
T Consensus      1535 ~~~~g~l-~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~---- 1608 (2512)
T 2vz8_A         1535 VLSRGDL-SSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA---- 1608 (2512)
T ss_dssp             ESSTTCT-TSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----
T ss_pred             ccCCCCc-CceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----
Confidence            3455666 788888 665433 3  38999999999999999999999876421     12346789999999873    


Q ss_pred             CCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEE
Q 021628           78 QVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILV  156 (310)
Q Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI  156 (310)
                            +||+|+++..         .|+|++|+++|...++++|+++++++||.++++++|||+++ +.+++++|++|||
T Consensus      1609 ------vGdrV~g~~~---------~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1609 ------SGRRVMGMVP---------AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             ------TSCCEEEECS---------SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             ------cCCEEEEeec---------CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                  7999998753         58999999999999999999999999999999999999999 5789999999999


Q ss_pred             EcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcccc----c--CCCccEEEeCCCC--
Q 021628          157 LGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--  224 (310)
Q Consensus       157 ~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~----~--~~~~dvvi~~~g~--  224 (310)
                      +|++|++|++++|+|+.+ |++|++++.++++++.+++    +|+++++++.+.++.+    .  .+|+|+|||+.+.  
T Consensus      1674 ~gaaGgVG~aAiqlAk~~-Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~ 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSR-GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHH
T ss_pred             EeCChHHHHHHHHHHHHc-CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchH
Confidence            998999999999999996 9999999999999999975    6788899887665432    1  3479999999873  


Q ss_pred             hHHHHhhcccCCEEEEEeCCCC-----------CCceEEEEec-------CHHHHHHHHHH----HHcCCeeEEecCCcc
Q 021628          225 CDKALKAVKEGGRVVSIIGSVT-----------PPASSFVLTS-------DGSILEKLNPY----FESGKVKAIIDPKGP  282 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~  282 (310)
                      +..++++++++|+++.+|....           .....+....       ....+.+++++    +.++.+++.  ++++
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~--i~~~ 1830 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPL--KCTV 1830 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCC--CEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCC--cceE
Confidence            5889999999999999985320           1122222210       12345555554    446777753  5689


Q ss_pred             cchhhHHHHHHHHHcCCCCccEEEEeC
Q 021628          283 FPFSQTLEAFSHLESSRATGKVVIHPI  309 (310)
Q Consensus       283 ~~~~~~~~a~~~~~~~~~~~k~vi~~~  309 (310)
                      |+++++++|++.+.+++..||+|++++
T Consensus      1831 f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1831 FPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             EESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             ecHHHHHHHHHhhhccCccceEEEECC
Confidence            999999999999999999999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.78  E-value=1.2e-18  Score=142.11  Aligned_cols=161  Identities=25%  Similarity=0.410  Sum_probs=117.9

Q ss_pred             CccccCCCCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          115 NLLALKPKNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       115 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      +.++++|+++++++|+.+++++.|||+++. .+++++|++|+|+|++|++|++++++++.. |++|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            467899999999999999999999999994 689999999999999999999999999996 999999999999998899


Q ss_pred             HcCCCEEeeCCCCcccc----c--CCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCC--C---------CceEEEE
Q 021628          194 SLGADLAIDYTKENIED----L--PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVT--P---------PASSFVL  254 (310)
Q Consensus       194 ~~g~~~~~~~~~~~~~~----~--~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~--~---------~~~~~~~  254 (310)
                      ++|.+.+++..+++..+    .  ..++|++||++|.  .+.++++|+++|+++.+|....  .         ....+..
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  160 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSV  160 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChhHhcCCcEEEE
Confidence            99988888766544321    1  2379999999984  5789999999999999986431  1         1122221


Q ss_pred             e-c------C----HHHHHHHHHHHHcCCeeEE
Q 021628          255 T-S------D----GSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       255 ~-~------~----~~~~~~~~~~~~~~~~~~~  276 (310)
                      . .      .    .+.++++++++.+|++++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          161 VDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             CCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            0 0      1    2457788888888888764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.80  E-value=1.3e-11  Score=111.10  Aligned_cols=177  Identities=21%  Similarity=0.212  Sum_probs=123.4

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           62 TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        62 ~~~G~e~~G~V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ...|++.++.|.++|++++++.+|+.++.-.-...+......|++++|...+...++.+|+.++...++.. .+..++|.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHH
Confidence            45799999999999999999999999732100000000011366778777777788888888877765543 34456777


Q ss_pred             HHHhcc----cCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhH-HHHHHcCCCEEeeCCCCcccccCCCc
Q 021628          142 GLERSA----FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKL-DLLRSLGADLAIDYTKENIEDLPEKF  215 (310)
Q Consensus       142 al~~~~----~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~  215 (310)
                      ++..+.    -.+|++|+|+| +|.+|.++++.++.. |. +|+++++++++. +.++++|.+ +++..  ++.+...++
T Consensus       154 av~~a~~~~~~l~g~~VlIiG-aG~iG~~~a~~l~~~-G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~--~l~~~l~~a  228 (404)
T 1gpj_A          154 AVELAERELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHLARS  228 (404)
T ss_dssp             HHHHHHHHHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHHHTC
T ss_pred             HHHHHHHHhccccCCEEEEEC-hHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCc-eecHH--hHHHHhcCC
Confidence            774332    25899999999 799999999999986 88 899999999886 566788875 33221  233333589


Q ss_pred             cEEEeCCCCh-----HHHHhh--c--ccCCEEEEEeCC
Q 021628          216 DVVFDAVGQC-----DKALKA--V--KEGGRVVSIIGS  244 (310)
Q Consensus       216 dvvi~~~g~~-----~~~~~~--l--~~~G~~v~~g~~  244 (310)
                      |+||+|++..     ...++.  +  ++++.++.++..
T Consensus       229 DvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          229 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             CEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            9999998732     255555  3  557777777643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.47  E-value=1.6e-07  Score=83.08  Aligned_cols=92  Identities=21%  Similarity=0.266  Sum_probs=71.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE--EeeCCCCcccccCCCccEEEeCCCC----
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      +++|+|+| +|++|+++++.++.+ |++|+++++++++++.+++++...  +++.+.+++.+...++|+||+|++.    
T Consensus       167 ~~~VlViG-aGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence            48999999 599999999999996 999999999999999987766432  3333323333333589999999862    


Q ss_pred             -----hHHHHhhcccCCEEEEEeCC
Q 021628          225 -----CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 -----~~~~~~~l~~~G~~v~~g~~  244 (310)
                           .+..++.++++|+++.++..
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~  269 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVD  269 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecC
Confidence                 35678999999999998754

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.42  E-value=9.7e-07  Score=80.65  Aligned_cols=101  Identities=23%  Similarity=0.288  Sum_probs=80.9

Q ss_pred             HHHHHHHHHhcc--cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCC
Q 021628          136 TETAYEGLERSA--FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE  213 (310)
Q Consensus       136 ~~ta~~al~~~~--~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  213 (310)
                      ..+++++++...  ..+|++|+|+| .|.+|..+++.++.. |++|+++++++++.+.+.++|++. .+     +.+...
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG-~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~Ga~~-~~-----l~e~l~  328 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICG-YGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMMEGFDV-VT-----VEEAIG  328 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-CC-----HHHHGG
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCEE-ec-----HHHHHh
Confidence            345666664333  78999999999 899999999999996 999999999999988888888752 22     223346


Q ss_pred             CccEEEeCCCC---h-HHHHhhcccCCEEEEEeCC
Q 021628          214 KFDVVFDAVGQ---C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       214 ~~dvvi~~~g~---~-~~~~~~l~~~G~~v~~g~~  244 (310)
                      ++|+|++++|+   + ...++.|+++|+++.+|..
T Consensus       329 ~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          329 DADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             GCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             CCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            89999999884   3 4788999999999999854

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.33  E-value=1e-06  Score=78.62  Aligned_cols=92  Identities=24%  Similarity=0.376  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC---------------Cc------
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK---------------EN------  207 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~---------------~~------  207 (310)
                      ++++|+|+| +|.+|+++++.++.+ |++|++.++++++++.++++|++.+ ++..+               ++      
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            689999999 899999999999996 9999999999999999988997654 22211               00      


Q ss_pred             --ccccCCCccEEEeCC---C--C----hHHHHhhcccCCEEEEEeC
Q 021628          208 --IEDLPEKFDVVFDAV---G--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       208 --~~~~~~~~dvvi~~~---g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                        +.+...++|+||+|+   |  .    ....++.|++++.++.++.
T Consensus       249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence              223345899999998   5  2    2678899999999999974

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.29  E-value=1.4e-06  Score=77.59  Aligned_cols=92  Identities=22%  Similarity=0.281  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCE-EeeCCCCcccccCCCccEEEeCCCC---
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      +|++|+|+| .|.+|+++++.++.+ |++|++.++++++++.+++ +|.+. +......++.+...++|+||+|++.   
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~  244 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA  244 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence            589999999 699999999999996 9999999999999988866 67653 2222222333334579999998752   


Q ss_pred             ------hHHHHhhcccCCEEEEEeC
Q 021628          225 ------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~  243 (310)
                            .+..++.|+++|.++.++.
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEec
Confidence                  3678899999999999973

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.26  E-value=1.5e-05  Score=66.32  Aligned_cols=116  Identities=16%  Similarity=0.164  Sum_probs=80.6

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC--C-EEeeCCCCccccc
Q 021628          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA--D-LAIDYTKENIEDL  211 (310)
Q Consensus       139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~~~~~  211 (310)
                      +.+.+....++++++||.+| +| .|..+..+++.  +.+++.++.+++.++.+++    .+.  . .+...+-......
T Consensus        80 ~~~~~~~~~~~~~~~vldiG-~G-~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~  155 (248)
T 2yvl_A           80 SFYIALKLNLNKEKRVLEFG-TG-SGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP  155 (248)
T ss_dssp             HHHHHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred             HHHHHHhcCCCCCCEEEEeC-CC-ccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence            33455677889999999999 77 69999999987  7789999999998888764    342  1 1222211111102


Q ss_pred             CCCccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628          212 PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG  271 (310)
Q Consensus       212 ~~~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (310)
                      ..++|+|+...+.    ++.+.+.|+++|+++....             ..+.+.++.+++.++
T Consensus       156 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~-------------~~~~~~~~~~~l~~~  206 (248)
T 2yvl_A          156 EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP-------------TANQVIKLLESIENY  206 (248)
T ss_dssp             TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES-------------SHHHHHHHHHHSTTT
T ss_pred             CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC-------------CHHHHHHHHHHHHhh
Confidence            3479999988763    3788899999999998752             234556666666655

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.25  E-value=1.5e-06  Score=77.81  Aligned_cols=92  Identities=21%  Similarity=0.388  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCC-------------CC--------c
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYT-------------KE--------N  207 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~--------~  207 (310)
                      ++++|+|+| +|.+|+++++.++.+ |++|+++++++++++.++++|++.+. +..             .+        .
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence            589999999 899999999999996 99999999999999989889876542 111             00        1


Q ss_pred             ccccCCCccEEEeCC---C--C----hHHHHhhcccCCEEEEEeC
Q 021628          208 IEDLPEKFDVVFDAV---G--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       208 ~~~~~~~~dvvi~~~---g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +.+...++|+||+++   |  .    ....++.|++++.++.++.
T Consensus       249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence            223334799999994   3  1    2678999999999999974

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.22  E-value=2.4e-06  Score=75.84  Aligned_cols=93  Identities=28%  Similarity=0.387  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEee-CCCCcccccCCCccEEEeCCCC---
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAID-YTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      ++++|+|+|+ |.+|+++++.++.. |++|+++++++++++.+++ ++.+...+ ...+++.+...++|+||+|++.   
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~  242 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA  242 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence            4689999995 99999999999996 9999999999999888865 77653222 2222333334579999999872   


Q ss_pred             ------hHHHHhhcccCCEEEEEeCC
Q 021628          225 ------CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~~  244 (310)
                            .+..++.|+++|+++.++..
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecC
Confidence                  36788999999999988754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.08  E-value=4e-06  Score=73.83  Aligned_cols=92  Identities=29%  Similarity=0.423  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-e--------CC-----------CCccc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-D--------YT-----------KENIE  209 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~--------~~-----------~~~~~  209 (310)
                      ++.+|+|+| .|.+|+.+++.++.+ |++|++.++++++++.++++|.+.+. +        +.           ..++.
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            679999999 899999999999997 99999999999999999999875431 0        00           01122


Q ss_pred             ccCCCccEEEeCCC-------C--hHHHHhhcccCCEEEEEeC
Q 021628          210 DLPEKFDVVFDAVG-------Q--CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       210 ~~~~~~dvvi~~~g-------~--~~~~~~~l~~~G~~v~~g~  243 (310)
                      +...++|+||.++.       .  .++.++.|++++.++.++.
T Consensus       261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~  303 (381)
T 3p2y_A          261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG  303 (381)
T ss_dssp             HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred             HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence            33468999999852       1  2789999999999999863

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.06  E-value=6.8e-06  Score=72.94  Aligned_cols=92  Identities=28%  Similarity=0.369  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee-------------CCC-----------
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-------------YTK-----------  205 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~-------------~~~-----------  205 (310)
                      ++.+|+|+| .|.+|+.+++.++.+ |++|++.++++++++.++++|.+.+..             +..           
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            679999999 899999999999996 999999999999999999898753211             000           


Q ss_pred             CcccccCCCccEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          206 ENIEDLPEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       206 ~~~~~~~~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..+.+...++|+||.|+.     .    .++.++.|++++.++.++.
T Consensus       267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred             hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence            011222358999999853     1    2799999999999999963

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.05  E-value=2.4e-06  Score=65.15  Aligned_cols=102  Identities=12%  Similarity=0.113  Sum_probs=73.0

Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCcc
Q 021628          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~d  216 (310)
                      .++.+++......+++|+|+| +|.+|.+.++.++.. |.++++.++++++.+.+ ++++.+.. ...  +..+...++|
T Consensus         8 v~~~a~~~~~~~~~~~v~iiG-~G~iG~~~a~~l~~~-g~~v~v~~r~~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~D   82 (144)
T 3oj0_A            8 IPSIVYDIVRKNGGNKILLVG-NGMLASEIAPYFSYP-QYKVTVAGRNIDHVRAFAEKYEYEYV-LIN--DIDSLIKNND   82 (144)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEC-CSHHHHHHGGGCCTT-TCEEEEEESCHHHHHHHHHHHTCEEE-ECS--CHHHHHHTCS
T ss_pred             HHHHHHHHHHhccCCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHHhCCceE-eec--CHHHHhcCCC
Confidence            477777666556699999999 799999999888874 88888889999887664 66774322 221  2222335789


Q ss_pred             EEEeCCCCh--HHHHhhcccCCEEEEEeCC
Q 021628          217 VVFDAVGQC--DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       217 vvi~~~g~~--~~~~~~l~~~G~~v~~g~~  244 (310)
                      +||+|++..  ....+++++++.++.++.+
T Consensus        83 ivi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           83 VIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             EEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             EEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            999998842  2223678888888888753

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.94  E-value=5.8e-05  Score=64.23  Aligned_cols=95  Identities=21%  Similarity=0.219  Sum_probs=71.6

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~dvv  218 (310)
                      .++++++++||.+| +|+.+..++.+++.. +++|+.++.+++..+.+++    .|.+.  ++..+..++.  ...||+|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV  192 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVL  192 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEE
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEE
Confidence            46889999999999 898888888888874 9999999999999888864    35422  2222222222  3579999


Q ss_pred             EeCCC--C----hHHHHhhcccCCEEEEEeC
Q 021628          219 FDAVG--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       219 i~~~g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +.+..  .    ++++.+.|+|||+++....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            97643  2    4788899999999997754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.72  E-value=0.00014  Score=62.16  Aligned_cols=91  Identities=18%  Similarity=0.256  Sum_probs=71.9

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      --.|++|+|+| .|.+|.++++.++.. |.+|++.++++++.+.+.++|... ++.  .++.+...++|+|+.+++.   
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~~l~~~l~~aDvVi~~~p~~~i  226 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAAL-GAKVKVGARESDLLARIAEMGMEP-FHI--SKAAQELRDVDVCINTIPALVV  226 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTSEE-EEG--GGHHHHTTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHCCCee-cCh--hhHHHHhcCCCEEEECCChHHh
Confidence            34789999999 899999999999985 999999999988877777777643 221  1233445689999999873   


Q ss_pred             hHHHHhhcccCCEEEEEeC
Q 021628          225 CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~  243 (310)
                      ....++.+++++.++.++.
T Consensus       227 ~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          227 TANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             CHHHHHHSCTTCEEEECSS
T ss_pred             CHHHHHhcCCCCEEEEecC
Confidence            2567889999999998874

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.70  E-value=0.00015  Score=64.54  Aligned_cols=99  Identities=21%  Similarity=0.274  Sum_probs=76.0

Q ss_pred             HHHHHHh--cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCcc
Q 021628          139 AYEGLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       139 a~~al~~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d  216 (310)
                      .+.++..  ...-.|++|+|.| .|.+|...++.++.. |++|+++++++.+...+...|... .     ++.+...++|
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~~G~~v-~-----~Leeal~~AD  277 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAM-GSIVYVTEIDPICALQACMDGFRL-V-----KLNEVIRQVD  277 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-C-----CHHHHTTTCS
T ss_pred             HHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHHcCCEe-c-----cHHHHHhcCC
Confidence            3444532  2356899999999 999999999999995 999999999988776666666432 1     2344556899


Q ss_pred             EEEeCCCC---h-HHHHhhcccCCEEEEEeCCC
Q 021628          217 VVFDAVGQ---C-DKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       217 vvi~~~g~---~-~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +|+.|.|+   + .+.++.|++++.++.+|...
T Consensus       278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             EEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            99999773   2 58899999999999987543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.62  E-value=0.00024  Score=60.98  Aligned_cols=91  Identities=15%  Similarity=0.310  Sum_probs=71.8

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--h
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--C  225 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~  225 (310)
                      --.|.+|+|+| .|.+|..+++.++.. |.+|++.++++++.+.+.++|.. .++.  .++.+...++|+|+.+++.  .
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l~~aDvVi~~~p~~~i  228 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAAL-GANVKVGARSSAHLARITEMGLV-PFHT--DELKEHVKDIDICINTIPSMIL  228 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHSTTCSEEEECCSSCCB
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHhhCCCEEEECCChhhh
Confidence            34689999999 899999999999985 99999999998887777777754 2222  2334445689999999873  2


Q ss_pred             -HHHHhhcccCCEEEEEeC
Q 021628          226 -DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~  243 (310)
                       ...++.+++++.++.++.
T Consensus       229 ~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          229 NQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CHHHHTTSCTTCEEEECSS
T ss_pred             CHHHHHhCCCCCEEEEEeC
Confidence             567889999999999875

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.59  E-value=0.00032  Score=63.59  Aligned_cols=88  Identities=23%  Similarity=0.254  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---h
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~  225 (310)
                      -.|++++|+| .|.+|.+.++.++.. |++|+++++++.+...+...+.+. .     +..+....+|+++++.|.   +
T Consensus       263 L~GKtVvVtG-aGgIG~aiA~~Laa~-GA~Viv~D~~~~~a~~Aa~~g~dv-~-----~lee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAG-YGDVGKGCAAALKQA-GARVIVTEIDPICALQATMEGLQV-L-----TLEDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-C-----CGGGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhCCcc-C-----CHHHHHHhcCEEEeCCCChhhh
Confidence            4799999999 789999999999996 999999999998887777666531 1     223445689999999883   2


Q ss_pred             -HHHHhhcccCCEEEEEeCC
Q 021628          226 -DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~~  244 (310)
                       ...++.+++++.++..|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence             5688999999999888754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.59  E-value=0.00041  Score=50.20  Aligned_cols=73  Identities=26%  Similarity=0.347  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g~  224 (310)
                      .+.+|+|+|+ |.+|...++.+... | .+|+++++++++.+.+...+...+ .+..+ +.......++|+||++++.
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~   79 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF   79 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence            4568999996 99999999988875 8 789999999999888876665432 22222 1222334589999999973

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.55  E-value=0.00048  Score=58.28  Aligned_cols=116  Identities=20%  Similarity=0.157  Sum_probs=77.6

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCC-CE--EeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGA-DL--AIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~-~~--~~~~~~~~~~~~~~  213 (310)
                      .+....+.++++||-.| +|. |..+..+++.++ +.+++.++.+++..+.+++    .+. +.  +...+-... ....
T Consensus       104 i~~~~~~~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~  180 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK  180 (277)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred             HHHHhCCCCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence            34567889999999999 666 888999988742 4689999999998877754    343 11  222211111 1124


Q ss_pred             CccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       214 ~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      .+|+|+...+.    +..+.+.|+++|+++....             ....+.++.+.+.+...
T Consensus       181 ~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~-------------~~~~~~~~~~~l~~~gf  231 (277)
T 1o54_A          181 DVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP-------------TTNQVQETLKKLQELPF  231 (277)
T ss_dssp             SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES-------------SHHHHHHHHHHHHHSSE
T ss_pred             ccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCC
Confidence            69999977653    4788899999999988752             23445566666665444

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.51  E-value=0.00032  Score=62.68  Aligned_cols=90  Identities=21%  Similarity=0.190  Sum_probs=71.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      ..-.|++|+|.| .|.+|...++.++.. |++|+++++++.+...+...|... .     ++.+....+|+|+.+.|+  
T Consensus       243 ~~L~GKTVgVIG-~G~IGr~vA~~lraf-Ga~Viv~d~dp~~a~~A~~~G~~v-v-----~LeElL~~ADIVv~atgt~~  314 (464)
T 3n58_A          243 VMMAGKVAVVCG-YGDVGKGSAQSLAGA-GARVKVTEVDPICALQAAMDGFEV-V-----TLDDAASTADIVVTTTGNKD  314 (464)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCEE-C-----CHHHHGGGCSEEEECCSSSS
T ss_pred             CcccCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCcchhhHHHhcCcee-c-----cHHHHHhhCCEEEECCCCcc
Confidence            356899999999 999999999999995 999999998887766555566532 2     223345678999999873  


Q ss_pred             -h-HHHHhhcccCCEEEEEeCC
Q 021628          225 -C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~  244 (310)
                       + ...+..|++++.++.+|..
T Consensus       315 lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          315 VITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             SBCHHHHHHSCTTEEEEECSSS
T ss_pred             ccCHHHHhcCCCCeEEEEcCCC
Confidence             2 6889999999999988754

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.47  E-value=0.0006  Score=56.07  Aligned_cols=94  Identities=23%  Similarity=0.311  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEe-eCCCCcccccCCCccEEEeCCCCh--
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAI-DYTKENIEDLPEKFDVVFDAVGQC--  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~~~~dvvi~~~g~~--  225 (310)
                      .+.+|+|+|++|.+|...+..+... |.+|+++++++++.+.+.+.+. ..+. |.. +......+++|+||+++|..  
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~~~~   97 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFASIDAVVFAAGSGPH   97 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTTCSEEEECCCCCTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhC-CCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcCCCEEEECCCCCCC
Confidence            4789999999999999988887775 9999999999999888876666 3332 222 33344456899999998721  


Q ss_pred             --------------HHHHhhcc--cCCEEEEEeCCC
Q 021628          226 --------------DKALKAVK--EGGRVVSIIGSV  245 (310)
Q Consensus       226 --------------~~~~~~l~--~~G~~v~~g~~~  245 (310)
                                    ..+++.+.  ..++++.++...
T Consensus        98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence                          22333332  247899887644

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.41  E-value=0.0054  Score=49.21  Aligned_cols=115  Identities=16%  Similarity=0.169  Sum_probs=79.6

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEK  214 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~  214 (310)
                      .+....++++++||-+| +|. |..++.+++.  +.+|+.++.+++..+.+++    .+..   .++..+..........
T Consensus        47 ~l~~l~~~~~~~vLDlG-cG~-G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~  122 (204)
T 3njr_A           47 TLAALAPRRGELLWDIG-GGS-GSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL  122 (204)
T ss_dssp             HHHHHCCCTTCEEEEET-CTT-CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred             HHHhcCCCCCCEEEEec-CCC-CHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence            34566788999999999 665 9999999886  7899999999998877753    4433   2233332221112247


Q ss_pred             ccEEEeCCC-C---hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          215 FDVVFDAVG-Q---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       215 ~dvvi~~~g-~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      +|+|+...+ .   ++.+.+.|+|+|+++...             ...+.+.+..+++.+...
T Consensus       123 ~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~-------------~~~~~~~~~~~~l~~~g~  172 (204)
T 3njr_A          123 PEAVFIGGGGSQALYDRLWEWLAPGTRIVANA-------------VTLESETLLTQLHARHGG  172 (204)
T ss_dssp             CSEEEECSCCCHHHHHHHHHHSCTTCEEEEEE-------------CSHHHHHHHHHHHHHHCS
T ss_pred             CCEEEECCcccHHHHHHHHHhcCCCcEEEEEe-------------cCcccHHHHHHHHHhCCC
Confidence            999997654 2   367778999999998764             234566677777766443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.40  E-value=0.00044  Score=53.08  Aligned_cols=76  Identities=22%  Similarity=0.350  Sum_probs=54.9

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEe-eCCCCc-cccc-CCCccEEEeCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI-DYTKEN-IEDL-PEKFDVVFDAV  222 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~-~~~~~~-~~~~-~~~~dvvi~~~  222 (310)
                      ...++++|+|+| +|.+|...++.++.. |.+|+++++++++.+.++ +.|...+. +..+.. +... ..++|+||.++
T Consensus        15 ~~~~~~~v~IiG-~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~   92 (155)
T 2g1u_A           15 KKQKSKYIVIFG-CGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFT   92 (155)
T ss_dssp             --CCCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred             cccCCCcEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence            446789999999 799999999998885 899999999999887776 56654332 111111 1111 35799999999


Q ss_pred             CC
Q 021628          223 GQ  224 (310)
Q Consensus       223 g~  224 (310)
                      ++
T Consensus        93 ~~   94 (155)
T 2g1u_A           93 ND   94 (155)
T ss_dssp             SC
T ss_pred             CC
Confidence            85

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.29  E-value=0.0041  Score=49.70  Aligned_cols=117  Identities=17%  Similarity=0.124  Sum_probs=78.7

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (310)
                      .+....++++++||-+| +| .|..+..+++.....+++.++.+++..+.+++    .+.+  .++..+..........+
T Consensus        32 ~l~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  109 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP  109 (204)
T ss_dssp             HHHHTTCCTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred             HHHHcCCCCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence            34566788999999999 66 49999999987323789999999998887754    3432  22222221111112569


Q ss_pred             cEEEeCCC--C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       216 dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      |+|+....  .    ++.+.+.|+++|+++....             .......+.+++.+..+
T Consensus       110 D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-------------~~~~~~~~~~~l~~~g~  160 (204)
T 3e05_A          110 DRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV-------------TLDTLTKAVEFLEDHGY  160 (204)
T ss_dssp             SEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC-------------BHHHHHHHHHHHHHTTC
T ss_pred             CEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec-------------ccccHHHHHHHHHHCCC
Confidence            99998753  2    3788889999999997642             23455666666666553

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.26  E-value=0.0031  Score=50.85  Aligned_cols=100  Identities=19%  Similarity=0.260  Sum_probs=69.8

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~  213 (310)
                      .+.....+++++||.+| +| .|..+..+++.. +  .+++.++.+++..+.+++    .+...  +...+.........
T Consensus        69 ~~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~  145 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIG-TG-CGYHAAVTAEIV-GEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA  145 (215)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred             HHHhhCCCCCCEEEEEC-CC-ccHHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence            34566788999999999 66 599999999985 5  789999999998877754    23221  22222111111134


Q ss_pred             CccEEEeCCC--C-hHHHHhhcccCCEEEEEeCC
Q 021628          214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       214 ~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (310)
                      .+|+|+.+..  . .+.+.+.|+++|+++..-..
T Consensus       146 ~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~  179 (215)
T 2yxe_A          146 PYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGR  179 (215)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESS
T ss_pred             CeeEEEECCchHHHHHHHHHHcCCCcEEEEEECC
Confidence            6999998765  2 47888999999999877543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.25  E-value=0.0021  Score=50.08  Aligned_cols=98  Identities=23%  Similarity=0.381  Sum_probs=69.1

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCC-CcccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTK-ENIEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~-~~~~~~~~~~  215 (310)
                      +....++++++|+-+| +|. |..+..+++...+.+++.++.+++..+.+++    .+..  ..+..+. +.+......+
T Consensus        18 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   95 (178)
T 3hm2_A           18 ISALAPKPHETLWDIG-GGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNP   95 (178)
T ss_dssp             HHHHCCCTTEEEEEES-TTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCC
T ss_pred             HHHhcccCCCeEEEeC-CCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCC
Confidence            3455778999999999 665 9999999987435789999999998887754    3433  2222222 2222223679


Q ss_pred             cEEEeCCC--C---hHHHHhhcccCCEEEEEe
Q 021628          216 DVVFDAVG--Q---CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       216 dvvi~~~g--~---~~~~~~~l~~~G~~v~~g  242 (310)
                      |+|+....  .   ++.+.+.|+++|+++...
T Consensus        96 D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  127 (178)
T 3hm2_A           96 DVIFIGGGLTAPGVFAAAWKRLPVGGRLVANA  127 (178)
T ss_dssp             SEEEECC-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred             CEEEECCcccHHHHHHHHHHhcCCCCEEEEEe
Confidence            99997653  2   478889999999998764

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.25  E-value=0.003  Score=49.67  Aligned_cols=90  Identities=20%  Similarity=0.262  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHcCCCEEe-eCCCCc-cccc--CCCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLAI-DYTKEN-IEDL--PEKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~--~~~~dvvi~~~g~  224 (310)
                      .+++|+|.| .|.+|...++.++. . |.+|+++++++++.+.+++.|...+. +..+.+ +...  ..++|+||.++++
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~-~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRA-RYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH  115 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHH-HHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHh-ccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence            367899999 89999999988887 5 88999999999999988888876543 322222 2222  4579999999885


Q ss_pred             h------HHHHhhcccCCEEEEE
Q 021628          225 C------DKALKAVKEGGRVVSI  241 (310)
Q Consensus       225 ~------~~~~~~l~~~G~~v~~  241 (310)
                      .      -..++.+.+..+++..
T Consensus       116 ~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          116 HQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             hHHHHHHHHHHHHHCCCCEEEEE
Confidence            2      1233444555566644

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.24  E-value=0.00081  Score=60.05  Aligned_cols=90  Identities=20%  Similarity=0.226  Sum_probs=71.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      ..-.|.+|+|.| .|.+|...++.++.. |++|+++++++.+...+...|....      ++.+....+|+|+.+.++  
T Consensus       207 ~~L~GktVgIiG-~G~IG~~vA~~Lka~-Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal~~ADVVilt~gt~~  278 (436)
T 3h9u_A          207 VMIAGKTACVCG-YGDVGKGCAAALRGF-GARVVVTEVDPINALQAAMEGYQVL------LVEDVVEEAHIFVTTTGNDD  278 (436)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC------CHHHHTTTCSEEEECSSCSC
T ss_pred             CcccCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCChhhhHHHHHhCCeec------CHHHHHhhCCEEEECCCCcC
Confidence            334699999999 999999999999996 9999999999888776766665321      345556689999988763  


Q ss_pred             -h-HHHHhhcccCCEEEEEeCC
Q 021628          225 -C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~  244 (310)
                       + ...++.|++++.++.++..
T Consensus       279 iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          279 IITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             SBCTTTGGGCCTTEEEEECSSS
T ss_pred             ccCHHHHhhcCCCcEEEEeCCC
Confidence             2 5778899999999888743

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.23  E-value=0.00088  Score=53.75  Aligned_cols=127  Identities=17%  Similarity=0.182  Sum_probs=75.3

Q ss_pred             ceeEEE-EecCccccCCCCCChhhhccccchHHHHHHHHH--hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE
Q 021628          106 LAEYTA-VEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA  182 (310)
Q Consensus       106 ~~~~~~-~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~  182 (310)
                      |.+|.. .+....+.+++.+.+..+.     ..+....+.  ...++++++||-+| +|. |..+..+++. ...+++.+
T Consensus        18 w~~~~~~~~~~~~~~~~~~~~f~~~~-----~~~~~~~~~~l~~~~~~~~~vLDiG-~G~-G~~~~~l~~~-~~~~v~~v   89 (205)
T 3grz_A           18 WEDYQPVFKDQEIIRLDPGLAFGTGN-----HQTTQLAMLGIERAMVKPLTVADVG-TGS-GILAIAAHKL-GAKSVLAT   89 (205)
T ss_dssp             TCCCCCSSTTCEEEEESCC-----CC-----HHHHHHHHHHHHHHCSSCCEEEEET-CTT-SHHHHHHHHT-TCSEEEEE
T ss_pred             ccccccCCCCceeEEecCCcccCCCC-----CccHHHHHHHHHHhccCCCEEEEEC-CCC-CHHHHHHHHC-CCCEEEEE
Confidence            455544 4555566666665544431     111222222  12257899999999 665 8888887775 24589999


Q ss_pred             ecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCccEEEeCCC-C-----hHHHHhhcccCCEEEEEe
Q 021628          183 TSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDVVFDAVG-Q-----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       183 ~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g-~-----~~~~~~~l~~~G~~v~~g  242 (310)
                      +.+++..+.+++    .+..  .+...+-.+  ...+.+|+|+.... .     ++.+.+.|+++|+++...
T Consensus        90 D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           90 DISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             ECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            999998877754    3432  222222211  22467999987654 1     367778899999998753

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.16  E-value=0.0019  Score=54.12  Aligned_cols=92  Identities=13%  Similarity=0.178  Sum_probs=68.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCCC--Ch
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG--QC  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~g--~~  225 (310)
                      .++++||.+| +|. |..+..+++...+.+++.++.+++..+.+++.+.. .+...+........+.+|+|+....  .+
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~l  161 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKA  161 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCCCH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChhhH
Confidence            6889999999 777 99999999874367899999999999998776533 2333322222222357999996543  46


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      .++.+.|+|+|+++...
T Consensus       162 ~~~~~~L~pgG~l~~~~  178 (269)
T 1p91_A          162 EELARVVKPGGWVITAT  178 (269)
T ss_dssp             HHHHHHEEEEEEEEEEE
T ss_pred             HHHHHhcCCCcEEEEEE
Confidence            88999999999999774

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.14  E-value=0.012  Score=48.70  Aligned_cols=118  Identities=17%  Similarity=0.077  Sum_probs=79.8

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHc-----CCCE--EeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL-----GADL--AIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~-----g~~~--~~~~~~~~~~~~~~  213 (310)
                      .+....++++++||-.| +|. |..+..+++..+ +.+++.++.+++..+.+++.     |.+.  +...+-.+......
T Consensus        88 ~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~  165 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAG-TGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA  165 (258)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred             HHHHcCCCCCCEEEEEC-CCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence            34566789999999999 664 999999998742 46899999999988887543     5222  22222111111124


Q ss_pred             CccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       214 ~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                      .+|+|+...+.    +..+.+.|+++|+++.+..             ..+.+.+.++.+.+..+.
T Consensus       166 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~-------------~~~~~~~~~~~l~~~gf~  217 (258)
T 2pwy_A          166 AYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP-------------NITQVLELVRAAEAHPFR  217 (258)
T ss_dssp             CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES-------------CHHHHHHHHHHHTTTTEE
T ss_pred             CcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCCc
Confidence            69999976553    4788899999999998752             234566666777665443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.13  E-value=0.0016  Score=52.58  Aligned_cols=89  Identities=20%  Similarity=0.307  Sum_probs=60.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcccccCCCccEEEeCCCCh------
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVGQC------  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~dvvi~~~g~~------  225 (310)
                      +|+|+|++|.+|...+..+... |.+|+++++++++.+.+. .+...+ .+..+... ....++|+||+++|..      
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~   78 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGISPDEAEK   78 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCSSTTTTTS
T ss_pred             eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcCCccccch
Confidence            5899999999999999888875 999999999988876553 233222 12222211 2335899999998721      


Q ss_pred             -----HHHHhhccc--CCEEEEEeCC
Q 021628          226 -----DKALKAVKE--GGRVVSIIGS  244 (310)
Q Consensus       226 -----~~~~~~l~~--~G~~v~~g~~  244 (310)
                           ..+++.+..  .++++.++..
T Consensus        79 ~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           79 HVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             HHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEecc
Confidence                 455555554  3788887643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.11  E-value=0.0039  Score=46.81  Aligned_cols=91  Identities=16%  Similarity=0.171  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCcc-cc-cCCCccEEEeCCCCh-
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENI-ED-LPEKFDVVFDAVGQC-  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~~-~~~~~dvvi~~~g~~-  225 (310)
                      -.++|+|.| .|.+|...++.++.. |.+|+++++++++.+.+++.|...+. +..+++. .. ...++|+++.+.++. 
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~   83 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLAS-DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY   83 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence            457899999 899999999988885 99999999999999999888875443 2222221 11 134789999998852 


Q ss_pred             -----HHHHhhcccCCEEEEEe
Q 021628          226 -----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g  242 (310)
                           -..++.+.+..+++...
T Consensus        84 ~n~~~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           84 EAGEIVASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHCCCCeEEEEE
Confidence                 13345555666666543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.08  E-value=0.0057  Score=49.07  Aligned_cols=99  Identities=16%  Similarity=0.112  Sum_probs=69.5

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (310)
                      .+.....+++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++    .+..  .+...+..........+
T Consensus        69 ~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~  144 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIG-TG-SGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF  144 (210)
T ss_dssp             HHHHTTCCTTCEEEEEC-CT-TSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHHhcCCCCCCEEEEEc-CC-CCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence            34566788999999999 66 58888888886  7899999999998877754    3432  22222211111123579


Q ss_pred             cEEEeCCC--C-hHHHHhhcccCCEEEEEeCC
Q 021628          216 DVVFDAVG--Q-CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       216 dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~~  244 (310)
                      |+|+....  . ...+.+.|+++|+++..-..
T Consensus       145 D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~  176 (210)
T 3lbf_A          145 DAIIVTAAPPEIPTALMTQLDEGGILVLPVGE  176 (210)
T ss_dssp             EEEEESSBCSSCCTHHHHTEEEEEEEEEEECS
T ss_pred             cEEEEccchhhhhHHHHHhcccCcEEEEEEcC
Confidence            99998754  2 36788999999999876443

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.07  E-value=0.0033  Score=54.14  Aligned_cols=96  Identities=16%  Similarity=0.271  Sum_probs=67.7

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCCEEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +...++++++||-+| +|. |..+..+++.. +++++.++.+++..+.+++.    +...-+.....+..+..+.+|+|+
T Consensus        84 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~  160 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIG-CGW-GTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIV  160 (318)
T ss_dssp             TTSCCCTTCEEEEES-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred             HhcCCCCcCEEEEEc-ccc-hHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEE
Confidence            456778999999999 665 99999999985 88999999999988887543    321111111112222336799998


Q ss_pred             eC-----CC--C----hHHHHhhcccCCEEEEEe
Q 021628          220 DA-----VG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~-----~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ..     .+  .    +..+.+.|+|+|+++...
T Consensus       161 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  194 (318)
T 2fk8_A          161 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  194 (318)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            66     22  1    267778999999998764

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.06  E-value=0.0048  Score=50.62  Aligned_cols=99  Identities=18%  Similarity=0.286  Sum_probs=69.1

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCC-CcccccCC
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTK-ENIEDLPE  213 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~-~~~~~~~~  213 (310)
                      ..++...++++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+...  +...+. ..+. ...
T Consensus        82 ~~~~~l~~~~~~~vLdiG-~G-~G~~~~~la~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~  157 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVG-TG-SGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP-PKA  157 (235)
T ss_dssp             HHHHHHTCCTTCCEEEEC-CT-TSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGC
T ss_pred             HHHHhcCCCCCCEEEEEe-CC-cCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC-CCC
Confidence            344556788999999999 66 799999999985 5889999999988777754    34322  222211 1111 122


Q ss_pred             CccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      .+|+|+.+..  . ...+.+.|+++|+++..-.
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~  190 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVG  190 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEEe
Confidence            4899998765  2 4788899999999987643

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.02  E-value=0.0017  Score=54.77  Aligned_cols=94  Identities=22%  Similarity=0.300  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCcccc----------cCCCcc
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKENIED----------LPEKFD  216 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~----------~~~~~d  216 (310)
                      -.|+++||+|+++++|.+.++.+... |++|+++++++++++.+ ++++.... +..+-.+..+          .-++.|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899999999999999988877664 99999999999988766 66764332 2222111111          123789


Q ss_pred             EEEeCCCC----------------------------hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVGQ----------------------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ++++++|.                            .+.++..|+.+|+++.++.
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS  160 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS  160 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence            99998861                            0455667888899998853

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.97  E-value=0.0094  Score=49.48  Aligned_cols=97  Identities=14%  Similarity=0.200  Sum_probs=70.8

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC----EEeeCCCCcccccCCCccEE
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD----LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~dvv  218 (310)
                      +....++++.+||-+| +| .|..+..+++.. +.+++.++.+++.++.+++....    .+...+-.......+.+|+|
T Consensus        48 ~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  124 (266)
T 3ujc_A           48 LSDIELNENSKVLDIG-SG-LGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLI  124 (266)
T ss_dssp             TTTCCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEE
T ss_pred             HHhcCCCCCCEEEEEC-CC-CCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEE
Confidence            3566788999999999 55 899999999985 89999999999999998765421    12222222222224579999


Q ss_pred             EeCCC--C---------hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      +....  .         +..+.+.|+|+|+++...
T Consensus       125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  159 (266)
T 3ujc_A          125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD  159 (266)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence            87632  1         367788999999999775

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.94  E-value=0.0021  Score=52.21  Aligned_cols=92  Identities=15%  Similarity=0.115  Sum_probs=60.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHH-hhcCCcEEEEecChh-hHHHHHHcCCC-EEeeCCCC---cccccCCCccEEEeCCCC-
Q 021628          152 KSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTA-KLDLLRSLGAD-LAIDYTKE---NIEDLPEKFDVVFDAVGQ-  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~-~~~g~~vi~~~~~~~-~~~~~~~~g~~-~~~~~~~~---~~~~~~~~~dvvi~~~g~-  224 (310)
                      .+|+|+|++|.+|...++.+. .. |.+|++++++++ +.+.+.+.+.. .++..+-.   +.....+++|++|+++|. 
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYT-DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            469999999999999887666 64 999999999988 76655322322 22222211   122233589999999984 


Q ss_pred             ---hHHHHhhcccC--CEEEEEeCC
Q 021628          225 ---CDKALKAVKEG--GRVVSIIGS  244 (310)
Q Consensus       225 ---~~~~~~~l~~~--G~~v~~g~~  244 (310)
                         .+.+++.+...  ++++.++..
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeec
Confidence               34555555433  688887643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.91  E-value=0.0023  Score=53.10  Aligned_cols=72  Identities=13%  Similarity=0.156  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcccc----------cCCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIED----------LPEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~----------~~~~~dvvi  219 (310)
                      +++|||+|+++++|.+.++.+... |++|+++++++++++.+.+.+.... +..+-.+..+          .-++.|+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            368999999999999987776664 9999999999998887765554332 2221111111          124789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        81 NNAG   84 (247)
T 3ged_A           81 NNAC   84 (247)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9886

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.83  E-value=0.0019  Score=52.35  Aligned_cols=88  Identities=18%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcccccCCCccEEEeCCCC-------
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVGQ-------  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~dvvi~~~g~-------  224 (310)
                      +|+|+|++|.+|...+..+... |.+|+++++++++...+...+...+ .+..+.+. ....++|+||+++|.       
T Consensus         2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~   79 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVPWGSGRG   79 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCCTTSSCT
T ss_pred             EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecccccccccCCCceEEecccccccH-hhcccCCEEEECCccCCCcchh
Confidence            5899999999999988888775 9999999999888776543343322 12222222 234589999999863       


Q ss_pred             ------hHHHHhhcc-cCCEEEEEe
Q 021628          225 ------CDKALKAVK-EGGRVVSII  242 (310)
Q Consensus       225 ------~~~~~~~l~-~~G~~v~~g  242 (310)
                            ...+++.+. .+++++.++
T Consensus        80 ~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           80 YLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             HHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHcCCcEEEEe
Confidence                  134454443 347888885

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.83  E-value=0.011  Score=49.66  Aligned_cols=98  Identities=16%  Similarity=0.202  Sum_probs=68.1

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHc-----C--CC--EEeeCCCCcccccC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL-----G--AD--LAIDYTKENIEDLP  212 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~-----g--~~--~~~~~~~~~~~~~~  212 (310)
                      +....++++++||-.| +| .|..+..+++... +.+++.++.+++..+.+++.     |  .+  .+...+-.......
T Consensus        92 ~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~  169 (280)
T 1i9g_A           92 VHEGDIFPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD  169 (280)
T ss_dssp             HHHTTCCTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred             HHHcCCCCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCC
Confidence            3566789999999999 66 7889999988642 46899999999988777542     4  22  12222211111113


Q ss_pred             CCccEEEeCCCC----hHHHHhhcccCCEEEEEe
Q 021628          213 EKFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       213 ~~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ..+|+|+.....    +..+.+.|+++|+++...
T Consensus       170 ~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          170 GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            469999876553    477888999999998875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.79  E-value=0.0063  Score=50.03  Aligned_cols=73  Identities=26%  Similarity=0.338  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccc------cCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED------LPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~------~~~~~dvvi~~~  222 (310)
                      ++.+++|+|++|.+|.+.++.+... |++|+++++++++.+.+ +++....++..+-.+...      ..+++|++|+++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence            4789999999999999988877774 99999999998877655 334322233222111111      123689999998


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        85 g   85 (244)
T 3d3w_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.78  E-value=0.0098  Score=50.71  Aligned_cols=94  Identities=14%  Similarity=0.173  Sum_probs=68.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d  216 (310)
                      ....++++++||-+| +|. |..+..+++.. +.+++.++.+++..+.+++    .+..   .+...+   ..+..+.+|
T Consensus        66 ~~~~~~~~~~vLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d---~~~~~~~fD  139 (302)
T 3hem_A           66 DKLNLEPGMTLLDIG-CGW-GSTMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG---WEEFDEPVD  139 (302)
T ss_dssp             HTTCCCTTCEEEEET-CTT-SHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC---GGGCCCCCS
T ss_pred             HHcCCCCcCEEEEee-ccC-cHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC---HHHcCCCcc
Confidence            566789999999999 664 99999999985 8999999999998877754    3422   122222   222256799


Q ss_pred             EEEeCCC--C----------------hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVG--Q----------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g--~----------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+....  .                +..+.+.|+|+|+++....
T Consensus       140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            9986421  1                2677789999999997653

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.78  E-value=0.0048  Score=53.94  Aligned_cols=106  Identities=22%  Similarity=0.303  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++...+.+.+.|...+     .++.+....+|+|+.+++.     
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~Plt~~t~  235 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPF-GCNLLYHDRLQMAPELEKETGAKFV-----EDLNEMLPKCDVIVINMPLTEKTR  235 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-CCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHC-CCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHHhcCCEEEECCCCCHHHH
Confidence            588999999 999999999999995 9999999988777777777775332     2334445678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|++++.++.++.-            ..-+-+.+.+.+.+|++.
T Consensus       236 ~li~~~~l~~mk~gailIN~aRG------------~~vde~aL~~aL~~g~i~  276 (351)
T 3jtm_A          236 GMFNKELIGKLKKGVLIVNNARG------------AIMERQAVVDAVESGHIG  276 (351)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCG------------GGBCHHHHHHHHHHTSEE
T ss_pred             HhhcHHHHhcCCCCCEEEECcCc------------hhhCHHHHHHHHHhCCcc
Confidence              1 6788999999999988631            112234455556666665

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.77  E-value=0.0065  Score=50.29  Aligned_cols=73  Identities=25%  Similarity=0.459  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcCCCEE-e--eCCCCc-ccc--cCCCccEEEeC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLA-I--DYTKEN-IED--LPEKFDVVFDA  221 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~-~--~~~~~~-~~~--~~~~~dvvi~~  221 (310)
                      .|++++|+|+++++|.+.++.+... |++|++.+++++  ..+.+++.|.... +  |-.++. ...  ...++|+.+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            5899999999999999988777664 999999998643  3555667775432 2  222211 111  12368999999


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus        87 AG   88 (247)
T 4hp8_A           87 AG   88 (247)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.76  E-value=0.0092  Score=48.58  Aligned_cols=94  Identities=13%  Similarity=0.226  Sum_probs=64.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcC-------CcEEEEecChhhHHHHHHc----C-------CCEEeeCCCCcc
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG-------ASKVAATSSTAKLDLLRSL----G-------ADLAIDYTKENI  208 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-------~~vi~~~~~~~~~~~~~~~----g-------~~~~~~~~~~~~  208 (310)
                      .++++++||-+| +|. |..+..+++.. +       .+++.++.+++..+.+++.    +       .-.+...+....
T Consensus        81 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~  157 (227)
T 1r18_A           81 HLKPGARILDVG-SGS-GYLTACFYRYI-KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG  157 (227)
T ss_dssp             TCCTTCEEEEES-CTT-SHHHHHHHHHH-HHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC
T ss_pred             hCCCCCEEEEEC-CCc-cHHHHHHHHhc-ccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC
Confidence            578999999999 665 98999998875 5       4899999999887776432    1       112222221111


Q ss_pred             cccCCCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          209 EDLPEKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      ......+|+|+....  . .+.+.+.|+++|+++..-.
T Consensus       158 ~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~  195 (227)
T 1r18_A          158 YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  195 (227)
T ss_dssp             CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEe
Confidence            111246999987765  2 4888999999999987644

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.76  E-value=0.021  Score=47.20  Aligned_cols=115  Identities=23%  Similarity=0.147  Sum_probs=77.8

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPE  213 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~  213 (310)
                      .+....++++++|+-.| +|. |..+..+++.++ +.+++.++.+++..+.+++    .+..   .+...+-.+. ....
T Consensus        85 i~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~  161 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAG-VGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEE  161 (255)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCC
T ss_pred             HHHhhCCCCCCEEEEec-CCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCC
Confidence            34567889999999999 665 888999988743 4688999999998877754    3432   1222221111 1124


Q ss_pred             CccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCC
Q 021628          214 KFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGK  272 (310)
Q Consensus       214 ~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (310)
                      .+|+|+...+.    ++.+.+.|+++|+++....             ..+...+..+.+.+..
T Consensus       162 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~-------------~~~~~~~~~~~l~~~g  211 (255)
T 3mb5_A          162 NVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP-------------CSNQVMRLHEKLREFK  211 (255)
T ss_dssp             SEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES-------------SHHHHHHHHHHHHHTG
T ss_pred             CcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC-------------CHHHHHHHHHHHHHcC
Confidence            69999987653    4788899999999987742             3345556666666543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.70  E-value=0.01  Score=50.17  Aligned_cols=73  Identities=22%  Similarity=0.372  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHH----HHHcCCCE-EeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDL----LRSLGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~----~~~~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      .+++++|+|++|++|.+.+..+... |++|++++++.++ .+.    +++.+... .+..+-.+...          ...
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999988877774 9999999887643 222    23445332 22221111111          013


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       107 ~iD~lv~~Ag  116 (283)
T 1g0o_A          107 KLDIVCSNSG  116 (283)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.70  E-value=0.013  Score=47.65  Aligned_cols=94  Identities=13%  Similarity=0.208  Sum_probs=65.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcC------CcEEEEecChhhHHHHHH----cC-----CC--EEeeCCCCccc
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG------ASKVAATSSTAKLDLLRS----LG-----AD--LAIDYTKENIE  209 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g------~~vi~~~~~~~~~~~~~~----~g-----~~--~~~~~~~~~~~  209 (310)
                      .++++++||-+| +|. |..+..+++.. +      .+++.++.+++..+.+++    .+     ..  .+...+.....
T Consensus        77 ~~~~~~~VLdiG-~G~-G~~~~~la~~~-~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVG-SGS-GYLTVCMAIKM-NVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN  153 (227)
T ss_dssp             TSCTTCEEEEES-CTT-SHHHHHHHHHT-TTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred             hCCCCCEEEEEC-CCC-CHHHHHHHHHh-cccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence            678999999999 665 88999999874 4      589999999998877754    23     11  22222211111


Q ss_pred             ----ccCCCccEEEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          210 ----DLPEKFDVVFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       210 ----~~~~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                          .....+|+|+....  . +..+.+.|+++|+++..-.
T Consensus       154 ~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          154 EEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             cccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence                11246999987754  2 4888999999999987643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.69  E-value=0.0055  Score=50.63  Aligned_cols=76  Identities=24%  Similarity=0.422  Sum_probs=52.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEee-CCCCccc------ccCCCccEE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAID-YTKENIE------DLPEKFDVV  218 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~-~~~~~~~------~~~~~~dvv  218 (310)
                      ...++++|+|+|+++++|.+.+..+... |++|+++++++++++.+ +++.....+. .+-.+..      +...++|++
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKL-GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            3457889999999999999988777664 99999999999887776 3444332221 1111111      112478999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.69  E-value=0.016  Score=49.86  Aligned_cols=98  Identities=23%  Similarity=0.294  Sum_probs=67.5

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~  215 (310)
                      +....++++++||-+| +|. |..+..+++... ..+|+.++.+++..+.+++    .|...  +...+-.+.......+
T Consensus        68 ~~~l~~~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~f  145 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPY  145 (317)
T ss_dssp             HHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred             HHhcCCCCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCe
Confidence            4566788999999999 666 888888888742 2459999999998877754    34322  2222211111123479


Q ss_pred             cEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628          216 DVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       216 dvvi~~~g--~-~~~~~~~l~~~G~~v~~g  242 (310)
                      |+|+....  . ...+.+.|+|+|+++..-
T Consensus       146 D~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          146 DVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             EEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            99998754  2 377889999999998763

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.68  E-value=0.005  Score=51.30  Aligned_cols=73  Identities=19%  Similarity=0.351  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-eeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-IDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~~~~~~~~~~----------~~~~  214 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+    ++.|.... +..+-.+..+          .-++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999977766664 99999999999887655    33454432 2221111111          1247


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        85 iDiLVNNAG   93 (254)
T 4fn4_A           85 IDVLCNNAG   93 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            899999876

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.67  E-value=0.01  Score=47.03  Aligned_cols=98  Identities=16%  Similarity=0.170  Sum_probs=66.2

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCC--C-EEeeCCCCccc-ccCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGA--D-LAIDYTKENIE-DLPEK  214 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~~~-~~~~~  214 (310)
                      ....++++++||-.| +|. |..+..+++... ..+++.++.+++..+.+++    .+.  . .++..+-.... ...+.
T Consensus        16 ~~~~~~~~~~vLDlG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~   93 (197)
T 3eey_A           16 IKMFVKEGDTVVDAT-CGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP   93 (197)
T ss_dssp             HHHHCCTTCEEEESC-CTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred             HHhcCCCCCEEEEcC-CCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence            345678899999998 555 888888888741 2589999999998877754    332  1 22323222222 22357


Q ss_pred             ccEEEeCCC------------------ChHHHHhhcccCCEEEEEeC
Q 021628          215 FDVVFDAVG------------------QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       215 ~dvvi~~~g------------------~~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+|+...+                  .+..+.+.|+++|+++....
T Consensus        94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            999986542                  13677889999999987753

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.66  E-value=0.017  Score=47.64  Aligned_cols=96  Identities=22%  Similarity=0.205  Sum_probs=67.5

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~  215 (310)
                      +....++++++||-+| +|. |..+..+++.. +.+++.++.+++.++.+++    .+..   .+...+-.+... .+.+
T Consensus        29 ~~~~~~~~~~~VLDiG-cG~-G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f  104 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLG-SGS-GEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC  104 (256)
T ss_dssp             HHHTCCCTTCEEEEET-CTT-CHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence            3556788999999999 555 88899999985 8899999999988777743    3421   222222222222 4579


Q ss_pred             cEEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       216 dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      |+|+....     .    +.++.+.|+|+|+++...
T Consensus       105 D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          105 DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            99986321     2    367788999999998764

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.66  E-value=0.015  Score=47.36  Aligned_cols=98  Identities=19%  Similarity=0.171  Sum_probs=68.3

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC---C-EEeeCCCCcccccCCCccE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA---D-LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~---~-~~~~~~~~~~~~~~~~~dv  217 (310)
                      .++....+++++||-+| +|. |..+..+++.  +.+++.++.+++..+.+++...   . .++..+..........+|+
T Consensus        62 ~~~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~  137 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIG-TGI-GYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR  137 (231)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred             HHHhcCCCCCCEEEEEc-CCC-CHHHHHHHHH--cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccE
Confidence            34556778999999999 665 8888888886  5789999999998888865321   1 2222221111112346999


Q ss_pred             EEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          218 VFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       218 vi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+....  . ...+.+.|+++|+++..-.
T Consensus       138 v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          138 VVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             EEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            987754  2 4788899999999987754

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.65  E-value=0.0048  Score=54.30  Aligned_cols=87  Identities=25%  Similarity=0.303  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+ |++.+++..+.+...++|....     .++.+....+|+|+.+++.    
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~-G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~aDvV~l~~P~t~~t  235 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPF-NPKELLYYDYQALPKDAEEKVGARRV-----ENIEELVAQADIVTVNAPLHAGT  235 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-CCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHHHTCSEEEECCCCSTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECCCccchhHHHhcCcEec-----CCHHHHHhcCCEEEECCCCChHH
Confidence            678999999 999999999999985 997 9999988776666677774321     1233344578999998762    


Q ss_pred             ---h-HHHHhhcccCCEEEEEeC
Q 021628          225 ---C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g~  243 (310)
                         + ...+..|++++.++.++.
T Consensus       236 ~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          236 KGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHHhCHHHHhhCCCCCEEEECCC
Confidence               1 467789999999988863

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.65  E-value=0.023  Score=46.04  Aligned_cols=94  Identities=16%  Similarity=0.216  Sum_probs=64.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHH----cC-----C-C-EEeeCCCCcccccCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRS----LG-----A-D-LAIDYTKENIEDLPE  213 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~----~g-----~-~-~~~~~~~~~~~~~~~  213 (310)
                      .++++++||-+| +|. |..+..+++.. +  .+++.++.+++..+.+++    .+     . . .+...+.........
T Consensus        74 ~~~~~~~vLDiG-~G~-G~~~~~la~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVG-SGS-GILTACFARMV-GCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA  150 (226)
T ss_dssp             TSCTTCEEEEET-CTT-SHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred             hCCCCCEEEEEc-CCc-CHHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCC
Confidence            478999999999 664 88888888875 5  589999999998877743    22     1 1 122222111111134


Q ss_pred             CccEEEeCCC---ChHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVG---QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g---~~~~~~~~l~~~G~~v~~g~  243 (310)
                      .+|+|+....   -+..+.+.|+++|+++..-.
T Consensus       151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~  183 (226)
T 1i1n_A          151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPVG  183 (226)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             CcCEEEECCchHHHHHHHHHhcCCCcEEEEEEe
Confidence            6999987654   24888999999999987644

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.62  E-value=0.0065  Score=50.29  Aligned_cols=73  Identities=19%  Similarity=0.289  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe-eCCCCccccc----------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI-DYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~----------~~~~dv  217 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++.+.+ ++++..... ..+-.+..+.          ..++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAAD-GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999999999999988877774 99999999998887665 455543322 1111111111          137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        84 lv~nAg   89 (247)
T 3rwb_A           84 LVNNAS   89 (247)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.62  E-value=0.0054  Score=50.67  Aligned_cols=72  Identities=24%  Similarity=0.344  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCccccc----------CCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDL----------PEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~----------~~~~dvv  218 (310)
                      .+.+++|+|++|++|.+.++.+... |++|+++++++++.+.+ ++++. ..+..+-.+....          .+++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999988877774 99999999998887665 34453 2222211111111          1368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus        82 vn~Ag   86 (245)
T 1uls_A           82 VHYAG   86 (245)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.61  E-value=0.0091  Score=54.21  Aligned_cols=89  Identities=19%  Similarity=0.178  Sum_probs=68.8

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      .-.|.+|.|.| .|.+|..+++.++.. |.+|++.++++.+...+...|.. +     .++.+....+|+|+.+.+.   
T Consensus       254 ~l~GktVgIIG-~G~IG~~vA~~l~~~-G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell~~aDiVi~~~~t~~l  325 (479)
T 1v8b_A          254 LISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-V-----VTLDEIVDKGDFFITCTGNVDV  325 (479)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHTTTCSEEEECCSSSSS
T ss_pred             ccCCCEEEEEe-eCHHHHHHHHHHHhC-cCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHHhcCCEEEECCChhhh
Confidence            35789999999 999999999999996 99999999998876445455542 1     1334455678999988653   


Q ss_pred             h-HHHHhhcccCCEEEEEeCC
Q 021628          225 C-DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ~-~~~~~~l~~~G~~v~~g~~  244 (310)
                      + ...++.|++++.++.++..
T Consensus       326 I~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          326 IKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             BCHHHHTTCCTTCEEEECSST
T ss_pred             cCHHHHhhcCCCcEEEEeCCC
Confidence            2 5778899999999988753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.59  E-value=0.011  Score=44.17  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCc-ccc-cCCCccEEEeCCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKEN-IED-LPEKFDVVFDAVGQ  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~-~~~~~dvvi~~~g~  224 (310)
                      ..+|+|.| .|.+|...++.+... |.+|+++++++++.+.+++.+...+. +..++. +.. ...++|++|.+.++
T Consensus         6 ~~~v~I~G-~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIG-SEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence            46899999 699999999888885 99999999999999988877754332 222221 111 13579999999985

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.57  E-value=0.0063  Score=50.49  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.++||+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   47 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKV   47 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4689999999999999988877664 99999999998877655

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.56  E-value=0.0078  Score=54.84  Aligned_cols=88  Identities=24%  Similarity=0.225  Sum_probs=68.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---h
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~  225 (310)
                      -.|.+|.|.| .|.+|..+++.++.+ |++|++.++++.+.......|...      .++.+....+|+|+.+++.   +
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~-G~~V~v~d~~~~~~~~a~~~G~~~------~~l~ell~~aDiVi~~~~t~~lI  346 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGL-GATVWVTEIDPICALQAAMEGYRV------VTMEYAADKADIFVTATGNYHVI  346 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSCHHHHHHHHTTTCEE------CCHHHHTTTCSEEEECSSSSCSB
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEEeCChHhHHHHHHcCCEe------CCHHHHHhcCCEEEECCCccccc
Confidence            5789999999 999999999999996 999999999987754444455431      1334456689999998763   2


Q ss_pred             -HHHHhhcccCCEEEEEeCC
Q 021628          226 -DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g~~  244 (310)
                       ...++.|+++..++.++..
T Consensus       347 ~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          347 NHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CHHHHHHCCTTEEEEECSSS
T ss_pred             CHHHHhhCCCCcEEEEcCCC
Confidence             5788999999999888653

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.53  E-value=0.016  Score=48.93  Aligned_cols=93  Identities=16%  Similarity=0.214  Sum_probs=65.8

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC---EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~d  216 (310)
                      +...++++++||-+| +|. |..+..+++.. +.+++.++.+++..+.+++.    +..   .+...+   .....+.+|
T Consensus        58 ~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~fD  131 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVG-CGW-GATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG---WEQFDEPVD  131 (287)
T ss_dssp             TTTTCCTTCEEEEET-CTT-SHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC---GGGCCCCCS
T ss_pred             HHcCCCCcCEEEEEC-Ccc-cHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC---hhhCCCCee
Confidence            456778999999999 554 88888999775 88999999999988877542    321   122222   222236799


Q ss_pred             EEEeCC-----C--C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAV-----G--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~-----g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+...     +  .    +..+.+.|+|+|+++...
T Consensus       132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            998652     2  1    367788999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.53  E-value=0.0046  Score=51.47  Aligned_cols=73  Identities=18%  Similarity=0.368  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++... .+..+-.+..+          ...++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEG-GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999988877664 99999999999887766 3454332 22222111111          1237899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        86 lv~nAg   91 (255)
T 4eso_A           86 LHINAG   91 (255)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999886

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.52  E-value=0.01  Score=49.42  Aligned_cols=73  Identities=19%  Similarity=0.307  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .++++||+|+++++|.+.++.+... |++|+++++++++.+.+ ++++... .+..+-.+...          ...++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVRE-GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988776664 99999999998887665 4555332 22222111111          1237999


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        86 lv~~Ag   91 (259)
T 4e6p_A           86 LVNNAA   91 (259)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.52  E-value=0.0066  Score=50.51  Aligned_cols=72  Identities=24%  Similarity=0.362  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~dvvi  219 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+..+++.. ..+..+-.+...          ..+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999988877764 9999999998777333344432 333222111111          013689999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9986

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.50  E-value=0.006  Score=52.38  Aligned_cols=85  Identities=21%  Similarity=0.327  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++ +.+.++|....      ++.+....+|+|+.+.+.     
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~~------~l~ell~~aDvV~l~~p~~~~t~  211 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANAL-GMNILLYDPYPNE-ERAKEVNGKFV------DLETLLKESDVVTIHVPLVESTY  211 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHTTCEEC------CHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCCCh-hhHhhcCcccc------CHHHHHhhCCEEEEecCCChHHh
Confidence            578999999 999999999999985 9999999998776 45666776321      233334578999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeC
Q 021628          225 --C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (310)
                        + ...+..|++++.++.++.
T Consensus       212 ~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          212 HLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             TCBCHHHHHHSCTTCEEEECSC
T ss_pred             hhcCHHHHhcCCCCeEEEECCC
Confidence              1 467789999999998863

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.49  E-value=0.008  Score=50.08  Aligned_cols=73  Identities=21%  Similarity=0.220  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEEe-eCCCCccc----------ccCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAI-DYTKENIE----------DLPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~-~~~~~~~~----------~~~~~  214 (310)
                      .|++++|+|+++++|.+.++.+... |++|++.++++++++..    ++.|.+... ..+-.+..          +.-++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5899999999999999988776664 99999999998876554    334543322 11111111          11247


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        87 iDiLVNNAG   95 (255)
T 4g81_D           87 VDILINNAG   95 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            899999987

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.47  E-value=0.011  Score=52.30  Aligned_cols=86  Identities=19%  Similarity=0.169  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++.+...++|....     .++.+....+|+|+.+.+.     
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~-G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell~~aDvV~l~~Plt~~t~  262 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPETE  262 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEEcCCccchhhHhhcCceec-----CCHHHHHhcCCEEEEecCCchHHH
Confidence            578999999 999999999999985 9999999988766666666775421     1234445678999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       263 ~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          263 HMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             HHhhHHHHhhCCCCCEEEECC
Confidence              1 56778899998888886

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.45  E-value=0.0077  Score=50.57  Aligned_cols=73  Identities=25%  Similarity=0.368  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCccccc----------CCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDL----------PEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~----------~~~~dvv  218 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+. ++.....+..+-.+....          ..++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999988877764 999999999988776653 343222222221111111          1368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus        87 v~nAg   91 (270)
T 1yde_A           87 VNNAG   91 (270)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.44  E-value=0.0065  Score=49.66  Aligned_cols=96  Identities=24%  Similarity=0.277  Sum_probs=65.8

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcc-ccc--CCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENI-EDL--PEK  214 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~-~~~--~~~  214 (310)
                      .....++++||-+| +| .|..+..+++...+.+++.++.+++..+.+++    .+..   .+...+.... ...  ...
T Consensus        49 ~~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  126 (233)
T 2gpy_A           49 LLKMAAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHHCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCC
T ss_pred             HHhccCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCC
Confidence            44556889999999 66 79999999987435789999999998877754    3432   1222221111 112  357


Q ss_pred             ccEEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628          215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       215 ~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+|+....  .    ++.+.+.|+++|+++...
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            999987654  2    367889999999998763

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.44  E-value=0.0058  Score=50.51  Aligned_cols=73  Identities=29%  Similarity=0.411  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe--eCCCC-cccc---cCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTKE-NIED---LPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~~-~~~~---~~~~~dvvi~~~g  223 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++++.+.++.....+  |..+. +...   ..+++|++|+++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4789999999999999988877764 99999999998776554433211222  22211 1111   1347899999887

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.42  E-value=0.0081  Score=50.57  Aligned_cols=89  Identities=17%  Similarity=0.297  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccC-CCccEEEeCCCChHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLP-EKFDVVFDAVGQCDK  227 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~-~~~dvvi~~~g~~~~  227 (310)
                      .+.+++|+| +|++|.+++..+... |.+|+++.++.++.+.+ ++++....++..+  ..+.. +++|++|+++|....
T Consensus       118 ~~k~vlViG-aGg~g~a~a~~L~~~-G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~~~~~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          118 PGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALS--MDELEGHEFDLIINATSSGIS  193 (271)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECC--SGGGTTCCCSEEEECCSCGGG
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHhhccCCeeEec--HHHhccCCCCEEEECCCCCCC
Confidence            578999999 589999988888875 89999999998887555 4554310011111  11122 589999999984321


Q ss_pred             ------HHhhcccCCEEEEEe
Q 021628          228 ------ALKAVKEGGRVVSII  242 (310)
Q Consensus       228 ------~~~~l~~~G~~v~~g  242 (310)
                            ....++++..++.+.
T Consensus       194 ~~~~~i~~~~l~~~~~v~D~~  214 (271)
T 1nyt_A          194 GDIPAIPSSLIHPGIYCYDMF  214 (271)
T ss_dssp             TCCCCCCGGGCCTTCEEEESC
T ss_pred             CCCCCCCHHHcCCCCEEEEec
Confidence                  113345555555554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.42  E-value=0.0062  Score=50.61  Aligned_cols=73  Identities=26%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc---c-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED---L-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~---~-------~~~~dv  217 (310)
                      .+.+++|+|++|++|.+.++.+... |++|+++++++++.+.+ ++++... .+..+-.+...   .       ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999988877774 99999999998877665 4444322 22221111111   1       137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        83 lv~nAg   88 (254)
T 1hdc_A           83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999986

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.41  E-value=0.001  Score=54.71  Aligned_cols=93  Identities=16%  Similarity=0.249  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCCC---
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g~---  224 (310)
                      ..+|+|+|++|.+|.+.++.+... | .+|+++++++++.+.+...+...+ .|..+ +++....+++|+||++++.   
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~  101 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADK-QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL  101 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence            358999999999999988888774 8 799999998876543221122111 12211 1122234588999998873   


Q ss_pred             ---hHHHHhhccc--CCEEEEEeCC
Q 021628          225 ---CDKALKAVKE--GGRVVSIIGS  244 (310)
Q Consensus       225 ---~~~~~~~l~~--~G~~v~~g~~  244 (310)
                         .+.+++.+..  .++|+.++..
T Consensus       102 ~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A          102 DIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hHHHHHHHHHHHHcCCCEEEEEecc
Confidence               2445555543  3689888653

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.41  E-value=0.023  Score=48.62  Aligned_cols=92  Identities=17%  Similarity=0.192  Sum_probs=65.7

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccEEEe
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ++++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+..   .++..+-.+.....+.+|+|+.
T Consensus       115 ~~~~~~vLDiG-cG-~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~  191 (312)
T 3vc1_A          115 AGPDDTLVDAG-CG-RGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWN  191 (312)
T ss_dssp             CCTTCEEEEES-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred             CCCCCEEEEec-CC-CCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEE
Confidence            78999999998 54 488889999985 8999999999998877754    3422   2222222222222357999986


Q ss_pred             CCC----C----hHHHHhhcccCCEEEEEe
Q 021628          221 AVG----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       221 ~~g----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ...    .    +..+.+.|+|+|+++...
T Consensus       192 ~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          192 NESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             ESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            532    1    378889999999999775

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.41  E-value=0.0067  Score=50.87  Aligned_cols=73  Identities=23%  Similarity=0.398  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCccccc----------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~----------~~~~dv  217 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++++.+ ++++.... +..+-.+....          ..++|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQ-GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988877764 99999999998887665 45664432 22221111111          137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus       105 lvnnAg  110 (266)
T 3grp_A          105 LVNNAG  110 (266)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.40  E-value=0.007  Score=51.09  Aligned_cols=73  Identities=21%  Similarity=0.266  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++++++++.+.+ ++++.. ..+..+-.+...          ...++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988776664 99999999998887665 455532 222222111111          1137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus       107 lvnnAg  112 (277)
T 3gvc_A          107 LVANAG  112 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.39  E-value=0.017  Score=47.40  Aligned_cols=73  Identities=19%  Similarity=0.213  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCccc---c---cCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIE---D---LPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~---~---~~~~~dvvi~~~  222 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++++++++.+.+.+ ......+..+-.+..   .   ..+++|++|+++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A   84 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence            4679999999999999988877774 9999999999887765533 321122222111111   1   123589999998


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        85 g   85 (244)
T 1cyd_A           85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            7

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.39  E-value=0.0079  Score=50.76  Aligned_cols=73  Identities=21%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+ ++++... .+..+-.+...          ...++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKN-GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988777664 99999999998887666 4455432 22221111111          0137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus       105 lv~nAg  110 (277)
T 4dqx_A          105 LVNNAG  110 (277)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.39  E-value=0.0087  Score=49.48  Aligned_cols=73  Identities=22%  Similarity=0.321  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE--EeeCCCCcccc---c------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL--AIDYTKENIED---L------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~--~~~~~~~~~~~---~------~~~~dv  217 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+ ++++...  .+..+-.+...   .      ..++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAAS-GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4679999999999999988877774 99999999998876655 3444322  22222111111   1      147899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        89 li~~Ag   94 (254)
T 2wsb_A           89 LVNSAG   94 (254)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999986

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.39  E-value=0.014  Score=48.97  Aligned_cols=84  Identities=24%  Similarity=0.313  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------  224 (310)
                      +.+++|+| +|+.|.+++..+... |.+++++.|+.++.+.+.+++.. .....     +. ..+|+||+|++.      
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~-G~~v~V~nRt~~ka~~la~~~~~-~~~~~-----~l-~~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD-CFMEP-----PK-SAFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCTTHHHHHHHTCE-EESSC-----CS-SCCSEEEECCTTCCCCSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHCCCe-EecHH-----Hh-ccCCEEEEcccCCCCCCC
Confidence            88999999 799999988887775 78899999999887666577742 22221     11 279999999752      


Q ss_pred             -h-HHH-HhhcccCCEEEEEeC
Q 021628          225 -C-DKA-LKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 -~-~~~-~~~l~~~G~~v~~g~  243 (310)
                       + ... ...++++..++.+..
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCChHHHHhhCCCCCEEEEeCC
Confidence             1 222 226777777777653

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.38  E-value=0.033  Score=48.27  Aligned_cols=98  Identities=21%  Similarity=0.253  Sum_probs=65.5

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHc----C------------CC-EEee
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL----G------------AD-LAID  202 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~----g------------~~-~~~~  202 (310)
                      .+....+++|++||-.| +|. |..+..+++.. |  .+++.++.+++..+.+++.    +            .. .+..
T Consensus        97 ~l~~l~~~~g~~VLDiG-~G~-G~~~~~la~~~-g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~  173 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAG-SGS-GGMSLFLSKAV-GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH  173 (336)
T ss_dssp             HHHHHTCCTTCEEEEEC-CTT-SHHHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred             HHHhcCCCCCCEEEEeC-CCc-CHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence            34556789999999999 666 88888888874 4  6899999999888777542    1            11 1222


Q ss_pred             CCCCccc-cc-CCCccEEEeCCCC----hHHHHhhcccCCEEEEEe
Q 021628          203 YTKENIE-DL-PEKFDVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       203 ~~~~~~~-~~-~~~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .+-.... .. ...+|+|+.....    +..+.+.|+|+|+++...
T Consensus       174 ~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~  219 (336)
T 2b25_A          174 KDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  219 (336)
T ss_dssp             SCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             CChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            2221111 11 2369999866542    478899999999999764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.38  E-value=0.0084  Score=49.90  Aligned_cols=73  Identities=22%  Similarity=0.297  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++... .+..+-.+...          ...++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999988777664 99999999999887766 4455332 22222111111          1136899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999876

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.37  E-value=0.0093  Score=51.78  Aligned_cols=86  Identities=21%  Similarity=0.288  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.+++.++ +.+.++|...      .++.+....+|+|+.+.+.    
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~------~~l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSF-GMKTIGYDPIISP-EVSASFGVQQ------LPLEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSSCH-HHHHHTTCEE------CCHHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcCcee------CCHHHHHhcCCEEEEecCCCHHH
Confidence            3578999999 999999999999985 9999999987665 3556677642      1334445678999998762    


Q ss_pred             ---h-HHHHhhcccCCEEEEEeC
Q 021628          225 ---C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g~  243 (310)
                         + ...++.|++++.++.++.
T Consensus       234 ~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhhCHHHHhhCCCCcEEEECCC
Confidence               1 467889999999998874

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.37  E-value=0.037  Score=46.04  Aligned_cols=100  Identities=17%  Similarity=0.228  Sum_probs=68.5

Q ss_pred             HHHHHh-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCccccc
Q 021628          140 YEGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDL  211 (310)
Q Consensus       140 ~~al~~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~  211 (310)
                      ..++.. ..++++++||-+| +| .|..+..+++. .+.+++.++.+++.++.+++    .+..   .++..+-.+....
T Consensus        35 ~~~l~~l~~~~~~~~vLDiG-cG-~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~  111 (267)
T 3kkz_A           35 LKALSFIDNLTEKSLIADIG-CG-TGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR  111 (267)
T ss_dssp             HHHHTTCCCCCTTCEEEEET-CT-TCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred             HHHHHhcccCCCCCEEEEeC-CC-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence            334443 3478999999999 55 58999999998 47799999999998877754    3321   2222222222222


Q ss_pred             CCCccEEEeCCC----C----hHHHHhhcccCCEEEEEe
Q 021628          212 PEKFDVVFDAVG----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       212 ~~~~dvvi~~~g----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .+.+|+|+....    .    ++.+.+.|+|+|+++...
T Consensus       112 ~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          112 NEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             TTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            457999986543    1    367888999999998775

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.36  E-value=0.02  Score=47.49  Aligned_cols=95  Identities=19%  Similarity=0.291  Sum_probs=65.2

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC--EEeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD--LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~~~~~~~~dv  217 (310)
                      .....+++++||-+| +| .|..+..+++.  +.+++.++.+++.++.+++.    +..  .+...+.+.+....+.+|+
T Consensus        31 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~  106 (260)
T 1vl5_A           31 QIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHI  106 (260)
T ss_dssp             HHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEEe-CC-CCHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEE
Confidence            344567899999999 66 78888888876  45899999999988777542    322  2222222222222357999


Q ss_pred             EEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          218 VFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      |+....     .    +.++.+.|+|+|+++...
T Consensus       107 V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          107 VTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            997643     1    367889999999998764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.36  E-value=0.0051  Score=45.89  Aligned_cols=73  Identities=23%  Similarity=0.385  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCC-ccccc-CCCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE-NIEDL-PEKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~~~-~~~~dvvi~~~g~  224 (310)
                      .+++|+|+| .|.+|...++.+... |.+|+++++++++.+.+++.+...+. +..+. .+... ..++|+++.+++.
T Consensus         5 ~~~~v~I~G-~G~iG~~~a~~l~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            5 KNKQFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            356899999 599999999988885 89999999998887766655543322 22111 11111 3579999999884

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.35  E-value=0.009  Score=50.18  Aligned_cols=73  Identities=22%  Similarity=0.255  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCcccc---c-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIED---L-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~---~-------~~~~dv  217 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++++++++.+ ++++... .+..+-.+...   .       ..++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARA-GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999988777664 99999999988887665 4555332 22221111111   1       137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        89 lv~nAg   94 (271)
T 3tzq_B           89 VDNNAA   94 (271)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.34  E-value=0.011  Score=50.12  Aligned_cols=73  Identities=18%  Similarity=0.339  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCE-EeeCCCCccc------ccCCCccEEEeC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AIDYTKENIE------DLPEKFDVVFDA  221 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~------~~~~~~dvvi~~  221 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++++++++.+.+. +++... .+..+-.+..      +...++|++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARR-GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999988877664 999999999998877664 444322 2222111111      112478999998


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus        94 Ag   95 (291)
T 3rd5_A           94 AG   95 (291)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.34  E-value=0.017  Score=49.79  Aligned_cols=74  Identities=20%  Similarity=0.191  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-----CCC-EEe---eCCC-CcccccCCCccEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-----GAD-LAI---DYTK-ENIEDLPEKFDVV  218 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-----g~~-~~~---~~~~-~~~~~~~~~~dvv  218 (310)
                      -.+.+|+|+|++|.+|...+..+... |.+|++++++.++.+.+.+.     +.. .++   +..+ +.+....+++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            35679999999999999988877774 99999999988776544321     221 122   2222 2233334589999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |++++
T Consensus        88 ih~A~   92 (342)
T 1y1p_A           88 AHIAS   92 (342)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            99976

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.33  E-value=0.0082  Score=50.74  Aligned_cols=73  Identities=23%  Similarity=0.358  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~----------~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++++.+ ++++.... +..+-.+..+          ...++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAE-GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999999999999988877764 99999999999887766 34543322 2221111111          1236899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        83 lvnnAg   88 (281)
T 3zv4_A           83 LIPNAG   88 (281)
T ss_dssp             EECCCC
T ss_pred             EEECCC
Confidence            999886

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.32  E-value=0.012  Score=49.01  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=35.0

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      .|++++|+|++|  ++|.+.++.+... |++|+++.+++++++.+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~   49 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELE   49 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            589999999776  8999877766664 999999999988766653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.32  E-value=0.0094  Score=48.67  Aligned_cols=72  Identities=17%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccc---c-------CCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIED---L-------PEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~---~-------~~~~dvvi  219 (310)
                      +.+++|+|++|.+|...+..+... |++|+++++++++++.+. ++.....+..+-.+...   .       ..++|++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK-GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999999999999988877774 999999999988776653 34322222222111111   0       13689999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9986

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.32  E-value=0.0078  Score=50.66  Aligned_cols=74  Identities=24%  Similarity=0.343  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCcccc---c-------CCCcc
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIED---L-------PEKFD  216 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~---~-------~~~~d  216 (310)
                      ..+.++||+|+++++|.+.+..+... |++|+++++++++++.+ ++++.. ..+..+-.+...   .       .+++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGA-GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45789999999999999988776664 99999999998887666 445422 222222111111   1       13789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++|+++|
T Consensus       105 ~lVnnAg  111 (272)
T 4dyv_A          105 VLFNNAG  111 (272)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999876

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=96.31  E-value=0.024  Score=46.48  Aligned_cols=98  Identities=15%  Similarity=0.249  Sum_probs=67.2

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (310)
                      .+....++++.+||-+| +|. |..+..+++.  +.+++.++.+++.++.+++    .+..  .+...+.+......+.+
T Consensus        13 ~~~~~~~~~~~~vLDiG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f   88 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIG-AGA-GHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSF   88 (239)
T ss_dssp             HHHHHTCCTTCEEEEES-CTT-SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCE
T ss_pred             HHHHhCcCCCCEEEEEc-cCc-CHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcE
Confidence            34567788999999999 554 8888888875  5689999999988777653    2322  22222222222223579


Q ss_pred             cEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       216 dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+|+....     .    +.++.+.|+|+|+++....
T Consensus        89 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           89 DIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99987632     1    3677889999999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.30  E-value=0.0043  Score=50.91  Aligned_cols=72  Identities=19%  Similarity=0.325  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +.+|+|+|++|.+|...+..+... |.  +|+++++++++.+....-+...+ .|..+ +++....+++|++|+++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag   93 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   93 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCC
Confidence            578999999999999988877774 88  99999998765432211122111 12221 223333458999999987

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.30  E-value=0.0062  Score=50.43  Aligned_cols=73  Identities=23%  Similarity=0.405  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCC-EEeeCCCCcccc---c-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYTKENIED---L-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~---~-------~~~~dv  217 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++.+.+. +++.. ..+..+-.+..+   .       ..++|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAER-GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999988877764 999999999988876663 34322 122211111111   0       137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        87 lv~nAg   92 (248)
T 3op4_A           87 LVNNAG   92 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.29  E-value=0.0077  Score=50.14  Aligned_cols=73  Identities=18%  Similarity=0.380  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-Hc---CCCE-EeeCCCCccccc----------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GADL-AIDYTKENIEDL----------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~---g~~~-~~~~~~~~~~~~----------~~~  214 (310)
                      .+.++||+|+++++|.+.++.+... |++|+++++++++++.+. ++   +... .+..+-.+....          ..+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKE-GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988877764 999999999988876663 32   2222 222221111111          137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.29  E-value=0.0066  Score=51.86  Aligned_cols=90  Identities=23%  Similarity=0.257  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCC--EEeeCCCCcccccCCCccEEEeCCCCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGAD--LAIDYTKENIEDLPEKFDVVFDAVGQC  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g~~  225 (310)
                      .+.+++|+| +|++|.+++..+... |+ +|+++.++.++.+.+ ++++..  .+.+.  ++..+...++|+||+|++..
T Consensus       140 ~~~~vlVlG-aGg~g~aia~~L~~~-G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIG-AGGGARGIYFSLLST-AAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHHTGGGCSEEEECSCTT
T ss_pred             CCCEEEEEC-cHHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHhhhccCCEEEECCCCC
Confidence            578999999 799999988888775 87 888999998887655 556542  12211  12223345799999998732


Q ss_pred             H--------HHHhhcccCCEEEEEeC
Q 021628          226 D--------KALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 ~--------~~~~~l~~~G~~v~~g~  243 (310)
                      .        -....+.++..++.+..
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            1        11245666666666643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.28  E-value=0.0076  Score=50.33  Aligned_cols=42  Identities=33%  Similarity=0.537  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++++++++.+.+
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   50 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARA-GANVAVAGRSTADIDAC   50 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            5789999999999999988877664 99999999998876654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.28  E-value=0.011  Score=49.94  Aligned_cols=73  Identities=22%  Similarity=0.378  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCC-EEeeCCCCcccc---c-------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYTKENIED---L-------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~---~-------~~~  214 (310)
                      .|.+++|+|+++++|.+.++.+... |++|+++++++++.+.+.    +.+.. ..+..+-.+...   .       ..+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEA-GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988777664 999999999888765542    23322 222222111111   1       137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       110 iD~lvnnAg  118 (276)
T 3r1i_A          110 IDIAVCNAG  118 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.28  E-value=0.032  Score=46.56  Aligned_cols=96  Identities=16%  Similarity=0.207  Sum_probs=66.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC---CEEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~d  216 (310)
                      +...++++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+.   ..+...+-.......+.+|
T Consensus        55 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD  131 (273)
T 3bus_A           55 ALLDVRSGDRVLDVG-CG-IGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFD  131 (273)
T ss_dssp             HHSCCCTTCEEEEES-CT-TSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEE
T ss_pred             HhcCCCCCCEEEEeC-CC-CCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCcc
Confidence            556778999999998 55 488888998874 8999999999998777754    232   1222222222222235799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     .    +..+.+.|+|+|+++...
T Consensus       132 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          132 AVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             EEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9985422     2    367788999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.28  E-value=0.029  Score=46.76  Aligned_cols=42  Identities=17%  Similarity=0.222  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCcc--hHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGG--VGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~--~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.  +|.+.+..+... |++|+++.++++..+.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   49 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSV   49 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHH
Confidence            4789999999855  999877766664 99999998887654444

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.28  E-value=0.0072  Score=49.63  Aligned_cols=72  Identities=19%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCE-EeeCCCCcccc----------cCCCccEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AIDYTKENIED----------LPEKFDVV  218 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~----------~~~~~dvv  218 (310)
                      +.+++|+|+++++|.+.+..+... |++|+++++++++++.+. +++... .+..+-.+..+          ..+++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVER-GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            578999999999999988776664 999999999998877663 343221 12211111111          11368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus        82 vnnAg   86 (235)
T 3l6e_A           82 LHCAG   86 (235)
T ss_dssp             EEECC
T ss_pred             EECCC
Confidence            99876

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.25  E-value=0.0097  Score=50.49  Aligned_cols=74  Identities=24%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHc----CCC-EEeeCCC-CcccccCCCccEEEeC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL----GAD-LAIDYTK-ENIEDLPEKFDVVFDA  221 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~~~dvvi~~  221 (310)
                      -.|.+++|+|++|++|.+.+..+... |++|+++.+++++.+.+ +++    +.. ...+..+ ++.......+|++|++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            36789999999999999988877775 89999999988876654 332    222 1223322 1222334568999999


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus       196 ag  197 (287)
T 1lu9_A          196 GA  197 (287)
T ss_dssp             CC
T ss_pred             CC
Confidence            86

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.23  E-value=0.0078  Score=50.06  Aligned_cols=73  Identities=18%  Similarity=0.221  Sum_probs=43.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCcccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~----------~~~~~dv  217 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+ ++++.. ..+..+-.+..+          ...++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQE-GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999988876664 99999999988776555 344422 222221111111          1137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        85 lv~nAg   90 (257)
T 3tpc_A           85 LVNCAG   90 (257)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.22  E-value=0.011  Score=49.30  Aligned_cols=73  Identities=21%  Similarity=0.248  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCccc---cc-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIE---DL-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~---~~-------~~~~dv  217 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+ ++++... ++..+-.+..   ..       ..++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4689999999999999988877774 99999999988776655 4455332 2222211111   11       127899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999876

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.22  E-value=0.0043  Score=52.43  Aligned_cols=92  Identities=16%  Similarity=0.134  Sum_probs=59.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCCC------
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ------  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g~------  224 (310)
                      +|+|+|++|.+|...+..+....|.+|+++++++++...+...+...+ .|..+ +.+....+++|+||.+++.      
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~   81 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFK   81 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchh
Confidence            589999999999998887665238899999999887654433333322 12222 1233345689999999872      


Q ss_pred             ----hHHHHhhcccC--CEEEEEeCC
Q 021628          225 ----CDKALKAVKEG--GRVVSIIGS  244 (310)
Q Consensus       225 ----~~~~~~~l~~~--G~~v~~g~~  244 (310)
                          ...+++.+...  ++++.++..
T Consensus        82 ~~~~~~~l~~aa~~~gv~~iv~~Ss~  107 (289)
T 3e48_A           82 RIPEVENLVYAAKQSGVAHIIFIGYY  107 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred             hHHHHHHHHHHHHHcCCCEEEEEccc
Confidence                13444544443  588877654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.21  E-value=0.008  Score=51.19  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~   81 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARA-GANVAVAARSPRELSSV   81 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988877664 99999999988876555

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.20  E-value=0.013  Score=48.77  Aligned_cols=42  Identities=21%  Similarity=0.347  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKE-GAHIVLVARQVDRLHEA   47 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4689999999999999988877774 99999999998876554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.20  E-value=0.012  Score=49.86  Aligned_cols=73  Identities=15%  Similarity=0.242  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-Hc---CCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SL---GADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~---g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+. ++   +... .+..+-.+...          ..++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAAD-GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999988876664 999999999988776653 33   3222 22222111111          1137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       106 iD~lVnnAg  114 (283)
T 3v8b_A          106 LDIVVANAG  114 (283)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999876

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.19  E-value=0.011  Score=48.82  Aligned_cols=42  Identities=24%  Similarity=0.351  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++++++.+.+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   49 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALARE-GAAVVVADINAEAAEAV   49 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEcCCHHHHHHH
Confidence            4789999999999999988877764 99999999998877655

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.19  E-value=0.013  Score=48.82  Aligned_cols=73  Identities=19%  Similarity=0.193  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH-HHHHHcCCCEE-eeCCCCc-ccc-------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGADLA-IDYTKEN-IED-------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~~~~g~~~~-~~~~~~~-~~~-------~~~~~dvvi  219 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++++++. +.+++.+...+ .|-.+.. ...       ...++|++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEH-GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4678999999999999988877664 99999999987664 34455554322 1222211 111       124789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.19  E-value=0.087  Score=42.59  Aligned_cols=118  Identities=16%  Similarity=0.223  Sum_probs=78.4

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-CEEeeCCCCccccc-CCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DLAIDYTKENIEDL-PEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~-~~~~dvv  218 (310)
                      ...++++++||=.| +|..|..+..+++.. +.+++.++.+++..+.+++    .+. -.++..+....... .+.+|+|
T Consensus        50 ~~~~~~~~~vLDlG-~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I  127 (230)
T 3evz_A           50 KTFLRGGEVALEIG-TGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVI  127 (230)
T ss_dssp             HTTCCSSCEEEEEC-CTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred             HhhcCCCCEEEEcC-CCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEE
Confidence            34467899999999 776899999999885 8899999999998877753    342 12333321111111 2579999


Q ss_pred             EeCCC----------------------------ChHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHc
Q 021628          219 FDAVG----------------------------QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFES  270 (310)
Q Consensus       219 i~~~g----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (310)
                      +..-.                            -+..+.+.|+++|+++..-.            .......++.+++.+
T Consensus       128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~------------~~~~~~~~~~~~l~~  195 (230)
T 3evz_A          128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP------------DKEKLLNVIKERGIK  195 (230)
T ss_dssp             EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE------------SCHHHHHHHHHHHHH
T ss_pred             EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec------------ccHhHHHHHHHHHHH
Confidence            85411                            13677788999999987621            233556677777777


Q ss_pred             CCeeEE
Q 021628          271 GKVKAI  276 (310)
Q Consensus       271 ~~~~~~  276 (310)
                      ..+...
T Consensus       196 ~g~~~~  201 (230)
T 3evz_A          196 LGYSVK  201 (230)
T ss_dssp             TTCEEE
T ss_pred             cCCceE
Confidence            665543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.19  E-value=0.017  Score=48.54  Aligned_cols=87  Identities=23%  Similarity=0.287  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCC--CEEeeCCCCcccccCCCccEEEeCCCCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA--DLAIDYTKENIEDLPEKFDVVFDAVGQC  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~dvvi~~~g~~  225 (310)
                      .+.+++|+| +|++|.+++..+... |+ +++++.|+.++.+.+ ++++.  .......  +...  ..+|+||+|++.-
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l~~--~~~DivInaTp~g  192 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQA-GPSELVIANRDMAKALALRNELDHSRLRISRYE--ALEG--QSFDIVVNATSAS  192 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GGTT--CCCSEEEECSSGG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hhcc--cCCCEEEECCCCC
Confidence            578999999 799999988877775 85 888999999887665 45543  1222221  1111  6799999998631


Q ss_pred             ------HHHHhhcccCCEEEEEe
Q 021628          226 ------DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ------~~~~~~l~~~G~~v~~g  242 (310)
                            .-....++++..++.+.
T Consensus       193 m~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESS
T ss_pred             CCCCCCCCCHHHhCcCCEEEEee
Confidence                  01224566666666554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.18  E-value=0.014  Score=48.20  Aligned_cols=73  Identities=22%  Similarity=0.392  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-H---cCCCE-EeeCCCCccccc----------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S---LGADL-AIDYTKENIEDL----------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~---~g~~~-~~~~~~~~~~~~----------~~~  214 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++++.+. +   .+... .+..+-.+....          .++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAE-GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999988877764 999999999988766542 2   24322 222221111110          137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        85 id~lv~nAg   93 (247)
T 2jah_A           85 LDILVNNAG   93 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999876

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.18  E-value=0.014  Score=48.25  Aligned_cols=73  Identities=21%  Similarity=0.366  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHH-HHHHcCCCE-EeeCCCCcccc---c-------CCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLD-LLRSLGADL-AIDYTKENIED---L-------PEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~-~~~~~g~~~-~~~~~~~~~~~---~-------~~~~d  216 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++ ++.+ .+++.+... .+..+-.+...   .       .+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999988877764 99999999987 6554 345555332 22222111111   1       24789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++|+++|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999986

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.17  E-value=0.013  Score=48.83  Aligned_cols=42  Identities=24%  Similarity=0.290  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARN-GARLLLFSRNREKLEAA   47 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999998876554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.17  E-value=0.022  Score=47.91  Aligned_cols=73  Identities=15%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H---HcCCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+ +   +.+... .+..+-.+...          ...+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999988877774 99999999998876544 2   234332 22221111111          1237


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       100 iD~lv~~Ag  108 (277)
T 2rhc_B          100 VDVLVNNAG  108 (277)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999986

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.17  E-value=0.01  Score=49.96  Aligned_cols=42  Identities=24%  Similarity=0.431  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   72 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEEL   72 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEECChHHHHHH
Confidence            5789999999999999988877774 99999999998776554

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.16  E-value=0.039  Score=43.03  Aligned_cols=96  Identities=20%  Similarity=0.207  Sum_probs=65.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCccc-ccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIE-DLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~-~~~~~~d  216 (310)
                      ....++++++||=.| +|. |..+..+++.  +.+|+.++.+++..+.+++    .+.+  .++......+. ...+.+|
T Consensus        16 l~~~~~~~~~vLDiG-cG~-G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD   91 (185)
T 3mti_A           16 LAEVLDDESIVVDAT-MGN-GNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIR   91 (185)
T ss_dssp             HHTTCCTTCEEEESC-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEE
T ss_pred             HHHhCCCCCEEEEEc-CCC-CHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcC
Confidence            345678999999998 554 8888888886  7899999999998877743    3432  22222222221 1245699


Q ss_pred             EEEeCCC-----------C-------hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVG-----------Q-------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g-----------~-------~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+...+           .       +..+.+.|+|+|+++....
T Consensus        92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9976532           1       2667789999999988754

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.16  E-value=0.012  Score=49.26  Aligned_cols=73  Identities=29%  Similarity=0.346  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCccccc----------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~----------~~~~dv  217 (310)
                      .+.+++|+|++|++|.+.++.+... |++|+++++++++++.+ ++++... .+..+-.+....          ...+|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            4679999999999999988877774 99999999998887666 4443221 222111111110          136899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        84 lvnnAg   89 (263)
T 2a4k_A           84 VAHFAG   89 (263)
T ss_dssp             EEEGGG
T ss_pred             EEECCC
Confidence            999876

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.16  E-value=0.014  Score=48.72  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   53 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEAS   53 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877764 99999999998876554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.0086  Score=50.16  Aligned_cols=73  Identities=19%  Similarity=0.316  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEE-eeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLA-IDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~-~~~~~~~~~~----------~~~~  214 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++++++++.+.    +.+.... +..+-.+..+          ..++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVA-GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999988776664 999999999988766552    2343222 2111111111          1137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        82 iD~lVnnAG   90 (264)
T 3tfo_A           82 IDVLVNNAG   90 (264)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.16  E-value=0.037  Score=48.26  Aligned_cols=49  Identities=31%  Similarity=0.443  Sum_probs=41.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      -.|++|+|.| .|.+|+.+++.++.. |++|++.+.++++.+..+++++..
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~-GakVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEEeCCccHHHHHHhcCCEE
Confidence            5789999999 999999999999996 999998888877756667777644

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.16  E-value=0.023  Score=47.45  Aligned_cols=74  Identities=18%  Similarity=0.226  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCcccc----------cCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      -.+++++|+|+++++|.+.+..+... |++|+++++++++++.+.    +.+... .+..+-.+..+          ...
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999988776664 999999999988766552    234332 22222111111          124


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        88 ~id~lv~nAg   97 (264)
T 3ucx_A           88 RVDVVINNAF   97 (264)
T ss_dssp             CCSEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7899999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.16  E-value=0.0088  Score=49.91  Aligned_cols=43  Identities=23%  Similarity=0.404  Sum_probs=36.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.+.++||+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   69 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSL-GARVVLTARDVEKLRAV   69 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            35789999999999999988776664 99999999998886655

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.15  E-value=0.016  Score=48.24  Aligned_cols=73  Identities=19%  Similarity=0.352  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCC-EEeeCCCCccc---cc-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGAD-LAIDYTKENIE---DL-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~---~~-------~~~~dv  217 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+. ++... ..+..+-.+..   ..       ..++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKA-GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999988877764 999999999988776653 34321 22222111111   11       127899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        90 lv~~Ag   95 (263)
T 3ak4_A           90 LCANAG   95 (263)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.15  E-value=0.013  Score=50.06  Aligned_cols=74  Identities=24%  Similarity=0.377  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCccccc----------CC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      -.|.+++|+|+++++|.+.+..+... |++|+++++++++++.+.    +.+... .+..+-.+....          ..
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARR-GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            46789999999999999988777664 999999999988876552    234332 222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.14  E-value=0.027  Score=47.10  Aligned_cols=94  Identities=27%  Similarity=0.433  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~~----------~~  213 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++ ++++.+.+    ++.+.... +..+-.+....          ..
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRL-GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877764 999998776 44444333    33454322 22221121111          13


Q ss_pred             CccEEEeCCCC----------------------------hHHHHhhcccCCEEEEEeCC
Q 021628          214 KFDVVFDAVGQ----------------------------CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       214 ~~dvvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g~~  244 (310)
                      ++|++|+++|.                            .+.++..+.++|+++.++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            68999998761                            03445567778999988653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.14  E-value=0.016  Score=47.35  Aligned_cols=72  Identities=18%  Similarity=0.315  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-----HcCCCEE-eeCCCCc---cccc-------CCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-----SLGADLA-IDYTKEN---IEDL-------PEK  214 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-----~~g~~~~-~~~~~~~---~~~~-------~~~  214 (310)
                      +++++|+|+++++|.+.++.+... |++|++++++.++.+.+.     +.+.... +..+-.+   ....       ..+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD-GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999988877774 999999999988766542     2343322 2221111   1111       137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        81 id~li~~Ag   89 (235)
T 3l77_A           81 VDVVVANAG   89 (235)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCc
Confidence            899999986

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.14  E-value=0.055  Score=45.75  Aligned_cols=93  Identities=15%  Similarity=0.100  Sum_probs=65.5

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC---CEEeeCCCCcccccCCCccEEE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---DLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      .+.++.+||-+| +| .|..+..+++.. +.+++.++.+++.++.+++    .+.   -.+...+-.......+.+|+|+
T Consensus        79 ~~~~~~~vLDiG-cG-~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  155 (297)
T 2o57_A           79 VLQRQAKGLDLG-AG-YGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIW  155 (297)
T ss_dssp             CCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred             CCCCCCEEEEeC-CC-CCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEE
Confidence            778999999998 55 788888999885 8899999999988777753    232   1222222222222235799998


Q ss_pred             eCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ....     .    +.++.+.|+|+|+++...
T Consensus       156 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          156 SQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            6532     1    367889999999999774

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.14  E-value=0.0064  Score=52.71  Aligned_cols=105  Identities=16%  Similarity=0.162  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+...++|....      ++.+.....|+|+.+.+.     
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~------~l~ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGW-GATLQYHEAKALDTQTEQRLGLRQV------ACSELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTS-CCEEEEECSSCCCHHHHHHHTEEEC------CHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCCCCcHhHHHhcCceeC------CHHHHHhhCCEEEEcCCCCHHHH
Confidence            478999999 999999999999985 9999999998766666666664211      233344568999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|++++.++.++.-            ..-+-.++.+.+.++.+.
T Consensus       216 ~li~~~~l~~mk~gailIN~arg------------~~vd~~aL~~aL~~g~i~  256 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCRG------------SVVDEAAVLAALERGQLG  256 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSCG------------GGBCHHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCC------------chhCHHHHHHHHHhCCcc
Confidence              1 5788899999999988631            112234455666666665

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.13  E-value=0.014  Score=50.27  Aligned_cols=42  Identities=29%  Similarity=0.441  Sum_probs=35.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+|+|+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~-G~~Vv~~~r~~~~~~~~   48 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQ-GCKVAIADIRQDSIDKA   48 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988777664 99999999998877655

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.13  E-value=0.0032  Score=51.99  Aligned_cols=74  Identities=24%  Similarity=0.382  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE-EeeCCCC-cc---cccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKE-NI---EDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~~-~~---~~~~~~~dvvi~~~g  223 (310)
                      -.|++++|+|+++++|.+.++.+... |++|+++++++++++....-.... ..|-.++ +.   .+.-++.|++++++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~-Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAEL-GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            36999999999999999988877774 999999999887765322111111 1121111 11   111347899999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.13  E-value=0.014  Score=48.91  Aligned_cols=73  Identities=32%  Similarity=0.432  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHc----CCCE-EeeCCCCcccc---c-------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSL----GADL-AIDYTKENIED---L-------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~----g~~~-~~~~~~~~~~~---~-------~~  213 (310)
                      .+++++|+|++|++|.+.+..+... |++|+++++++++++.+ +++    +... .+..+-.+...   .       ..
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877764 99999999998876544 222    4332 22221111111   0       13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        99 ~iD~lvnnAg  108 (267)
T 1vl8_A           99 KLDTVVNAAG  108 (267)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.12  E-value=0.019  Score=48.20  Aligned_cols=73  Identities=21%  Similarity=0.404  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H---HcCCCE-Ee--eCCCCc-ccc-------cC-C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADL-AI--DYTKEN-IED-------LP-E  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~-~~--~~~~~~-~~~-------~~-~  213 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+ +   +.+... .+  |..+.+ ...       .. .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988877774 99999999998876544 2   234332 22  221111 111       11 5


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        99 ~id~lv~nAg  108 (273)
T 1ae1_A           99 KLNILVNNAG  108 (273)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7899999987

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=96.12  E-value=0.056  Score=44.54  Aligned_cols=99  Identities=12%  Similarity=0.057  Sum_probs=68.9

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEE
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      ..+......++++||-+| +| .|..+..+++...+.+++.++.+++..+.+++... -.+...+..... ....+|+|+
T Consensus        24 ~l~~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~  100 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLG-CG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLY  100 (259)
T ss_dssp             HHHTTCCCSCCSSEEEET-CT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEE
T ss_pred             HHHHhcCCCCCCEEEEec-Cc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEE
Confidence            334556678899999998 55 68888888887436799999999999888865432 223333222222 345799998


Q ss_pred             eCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ....     .    +..+.+.|+|+|+++...
T Consensus       101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A          101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             EESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            7643     2    267778999999998764

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.12  E-value=0.022  Score=47.37  Aligned_cols=90  Identities=20%  Similarity=0.255  Sum_probs=62.0

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ++++++||-+| +|. |..++.+++.  |.+++.++.++...+.+++    .+.. .+...+-... .....+|+|+...
T Consensus       118 ~~~~~~VLDiG-cG~-G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~  192 (254)
T 2nxc_A          118 LRPGDKVLDLG-TGS-GVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANL  192 (254)
T ss_dssp             CCTTCEEEEET-CTT-SHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEEC
T ss_pred             cCCCCEEEEec-CCC-cHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECC
Confidence            67899999999 666 8888888774  6699999999998877754    3332 2222111110 1134699999654


Q ss_pred             C--C----hHHHHhhcccCCEEEEEe
Q 021628          223 G--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .  .    +..+.+.|+|+|+++..+
T Consensus       193 ~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          193 YAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence            2  1    367788999999999865

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.11  E-value=0.012  Score=48.89  Aligned_cols=73  Identities=18%  Similarity=0.284  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCccccc----------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIEDL----------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~----------~~~  214 (310)
                      .|.+++|+|+++++|.+.++.+... |++|+++++++++.+.+.    +.+... .+..+-.+....          .++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988776664 999999999888765542    334332 222221111110          137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        90 id~lv~nAg   98 (256)
T 3gaf_A           90 ITVLVNNAG   98 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999986

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.11  E-value=0.039  Score=46.22  Aligned_cols=93  Identities=22%  Similarity=0.407  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~~----------~~  213 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++ ++++.+.+    ++.+.... +..+-.+....          ..
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALE-GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988776664 999998865 44544433    33454322 22221121111          13


Q ss_pred             CccEEEeCCCC----------------------------hHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVGQ----------------------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ++|++|+++|.                            .+.++..|.++|+++.++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            78999998861                            0234456667899998864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.10  E-value=0.011  Score=49.68  Aligned_cols=73  Identities=25%  Similarity=0.352  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCccccc----------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~----------~~~~dv  217 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+ ++++... .+..+-.+....          ..++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAA-GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4678999999999999988877774 99999999988887666 4454332 222221111111          137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        83 lv~~Ag   88 (281)
T 3m1a_A           83 LVNNAG   88 (281)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.09  E-value=0.016  Score=48.33  Aligned_cols=73  Identities=18%  Similarity=0.252  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH---HHcCCCE-Ee--eCCCCc-ccc-------cCCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSLGADL-AI--DYTKEN-IED-------LPEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~---~~~g~~~-~~--~~~~~~-~~~-------~~~~~  215 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++.+.+   .+.+... .+  |-.+++ ...       .-++.
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEE-RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999977766664 99999999977765444   3344322 22  221111 110       12478


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++++++|
T Consensus        85 DiLVNnAG   92 (258)
T 4gkb_A           85 DGLVNNAG   92 (258)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.09  E-value=0.016  Score=47.56  Aligned_cols=70  Identities=24%  Similarity=0.337  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCccccc-------CCCccEEEeCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDL-------PEKFDVVFDAV  222 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-------~~~~dvvi~~~  222 (310)
                      +.+++|+|++|++|.+.+..+... |++|+++++++++  ..++++...+ .+..+++....       .+++|++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~-G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVAR-GYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            578999999999999988877774 9999999998776  2344452211 12222221111       23789999988


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        79 g   79 (239)
T 2ekp_A           79 A   79 (239)
T ss_dssp             C
T ss_pred             C
Confidence            6

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.08  E-value=0.011  Score=49.99  Aligned_cols=42  Identities=33%  Similarity=0.393  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++.+.+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~   73 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAE-GYSVVITGRRPDVLDAA   73 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988877764 99999999998876655

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.08  E-value=0.014  Score=48.07  Aligned_cols=42  Identities=33%  Similarity=0.419  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   54 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAH-GASVVLLGRTEASLAEV   54 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEecCHHHHHHH
Confidence            5789999999999999988777664 99999999998877655

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.08  E-value=0.0087  Score=50.06  Aligned_cols=42  Identities=21%  Similarity=0.378  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   48 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEA-GAAVAFCARDGERLRAA   48 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877664 99999999998876554

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.07  E-value=0.06  Score=44.36  Aligned_cols=95  Identities=16%  Similarity=0.213  Sum_probs=66.5

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dv  217 (310)
                      ...++++++||-+| +| .|..+..+++.. +.+++.++.+++..+.+++    .+..   .++..+-..+....+.+|+
T Consensus        41 l~~~~~~~~vLDiG-~G-~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~  117 (257)
T 3f4k_A           41 INELTDDAKIADIG-CG-TGGQTLFLADYV-KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDL  117 (257)
T ss_dssp             SCCCCTTCEEEEET-CT-TSHHHHHHHHHC-CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEE
T ss_pred             HhcCCCCCeEEEeC-CC-CCHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEE
Confidence            34778899999999 55 499999999984 6699999999998877643    3422   2222222222222357999


Q ss_pred             EEeCCC--C------hHHHHhhcccCCEEEEEe
Q 021628          218 VFDAVG--Q------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~~g--~------~~~~~~~l~~~G~~v~~g  242 (310)
                      |+....  .      +..+.+.|+|+|+++...
T Consensus       118 v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          118 IWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            986532  1      367888999999998775

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.07  E-value=0.017  Score=48.01  Aligned_cols=73  Identities=21%  Similarity=0.316  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HH---cCCCE-EeeCCCCccc---c-------cC-C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RS---LGADL-AIDYTKENIE---D-------LP-E  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~---~g~~~-~~~~~~~~~~---~-------~~-~  213 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+ ++   .+... .+..+-.+..   .       .. .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988877764 99999999988876544 22   24322 2221111111   1       11 5


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.07  E-value=0.0069  Score=49.97  Aligned_cols=69  Identities=16%  Similarity=0.085  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-e--cChhhHHHH-HHc-CCCEEeeCCCCcccc-------cCCCccEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-T--SSTAKLDLL-RSL-GADLAIDYTKENIED-------LPEKFDVV  218 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~--~~~~~~~~~-~~~-g~~~~~~~~~~~~~~-------~~~~~dvv  218 (310)
                      +.+++|+|+++++|.+.++.+... |++|+++ .  +++++++.+ +++ +.+ +.+.  ++...       ...++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~--~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQD-GYTVVCHDASFADAAERQRFESENPGTI-ALAE--QKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCC--CCGGGHHHHHGGGSSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCH--HHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999988877774 9999999 6  888877665 344 322 2222  22111       12478999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+++|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.07  E-value=0.0077  Score=48.64  Aligned_cols=88  Identities=16%  Similarity=0.265  Sum_probs=59.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe--eCCC--CcccccCCCccEEEeCCCC----
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI--DYTK--ENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~--~~~~--~~~~~~~~~~dvvi~~~g~----  224 (310)
                      +|+|+|++|.+|...+..+... |.+|+++++++++.+.+  .+. .++  +..+  +++....+++|+||+++|.    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~--~~~-~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~   77 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKVEQVPQY--NNV-KAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKS   77 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS-SCEEEEEESSGGGSCCC--TTE-EEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCccchhhc--CCc-eEEEecccCCHHHHHHHHcCCCEEEECCcCCCCC
Confidence            6899999999999999888874 99999999988765432  111 222  2222  2233445689999999872    


Q ss_pred             --------hHHHHhhcccC--CEEEEEeCC
Q 021628          225 --------CDKALKAVKEG--GRVVSIIGS  244 (310)
Q Consensus       225 --------~~~~~~~l~~~--G~~v~~g~~  244 (310)
                              ....++.+...  ++++.++..
T Consensus        78 ~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           78 LLKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             CCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             cEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence                    13444444433  588888654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.06  E-value=0.017  Score=47.04  Aligned_cols=71  Identities=21%  Similarity=0.344  Sum_probs=47.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCE-Ee--eCCCCc-c----cccCCCccEEEeCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADL-AI--DYTKEN-I----EDLPEKFDVVFDAV  222 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~-~----~~~~~~~dvvi~~~  222 (310)
                      ++++|+|+++++|.+.+..+... |++|+++++++++++.+. +++... .+  |..+.. .    ....+.+|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            46899999999999988877774 999999999999887774 443221 11  222111 1    11223459999988


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.06  E-value=0.02  Score=48.21  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~   69 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEA-GARVFICARDAEACADT   69 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999998876554

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.06  E-value=0.012  Score=50.57  Aligned_cols=105  Identities=24%  Similarity=0.252  Sum_probs=74.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++++++. .+.++|... .     +..+....+|+|+.+.+.    
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~-~~~~~g~~~-~-----~l~ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAM-GMKVLAYDILDIRE-KAEKINAKA-V-----SLEELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHT-TCEEEEECSSCCHH-HHHHTTCEE-C-----CHHHHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEECCCcchh-HHHhcCcee-c-----CHHHHHhhCCEEEEeccCChHH
Confidence            4578999999 999999999999985 99999999887764 356677542 1     233334578999988762    


Q ss_pred             ---h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 ---C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 ---~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                         + ...+..|++++.++.++.-            ..-+-..+.+.+.++.+.
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~arg------------~~vd~~aL~~aL~~g~i~  252 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSRA------------VAVNGKALLDYIKKGKVY  252 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSCG------------GGBCHHHHHHHHHTTCEE
T ss_pred             HHhhCHHHHhcCCCCCEEEECCCC------------cccCHHHHHHHHHcCCCc
Confidence               1 5677889999988888631            111234556666777764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.04  E-value=0.038  Score=46.16  Aligned_cols=92  Identities=13%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             ccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccccc
Q 021628          132 LPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDL  211 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  211 (310)
                      .||........++... -.|.+++|.|..+.+|..+++++... |+.|+++.+....++                   +.
T Consensus       132 ~PcTp~gv~~lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~-gAtVtv~~~~t~~L~-------------------~~  190 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNR-NYTVSVCHSKTKDIG-------------------SM  190 (276)
T ss_dssp             CCHHHHHHHHHHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSCHH-------------------HH
T ss_pred             CCCcHHHHHHHHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHC-CCeEEEEeCCcccHH-------------------Hh
Confidence            4555444445555445 78999999996677999999998886 999888865432222                   22


Q ss_pred             CCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          212 PEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       212 ~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      .+.+|+||.++|... -.-++++++..++.+|..
T Consensus       191 ~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          191 TRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGIN  224 (276)
T ss_dssp             HHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCE
T ss_pred             hccCCEEEECCCCCccccHhhccCCcEEEEeccC
Confidence            346789999888531 112457888888888753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.04  E-value=0.014  Score=48.39  Aligned_cols=73  Identities=29%  Similarity=0.352  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-EeeCCCCccccc----------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AIDYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~----------~~~~dv  217 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+ ++++... .+..+-.+....          ...+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999999999999988877774 99999999998877655 4444332 222111111110          135799


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        84 lv~~Ag   89 (253)
T 1hxh_A           84 LVNNAG   89 (253)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.02  E-value=0.0051  Score=52.11  Aligned_cols=92  Identities=21%  Similarity=0.254  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCC----CEEeeCCCCcccccCCCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA----DLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~----~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      -.+.+++|+| +|++|.+++..+... |+ +++++.|+.++.+.+ ++++.    ..+.....++..+....+|+||+|+
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~-G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTH-GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence            4578999999 699999988877775 87 688999998887655 33321    1111111122222234789999998


Q ss_pred             CC-h------HHHHhhcccCCEEEEEe
Q 021628          223 GQ-C------DKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g~-~------~~~~~~l~~~G~~v~~g  242 (310)
                      +. .      .-....++++..++.+-
T Consensus       203 p~Gm~~~~~~pi~~~~l~~~~~v~Dlv  229 (283)
T 3jyo_A          203 PMGMPAHPGTAFDVSCLTKDHWVGDVV  229 (283)
T ss_dssp             STTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred             CCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence            62 1      11234566655555543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.02  E-value=0.014  Score=48.56  Aligned_cols=73  Identities=21%  Similarity=0.234  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC-EEeeCCCCccc---cc-------CCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD-LAIDYTKENIE---DL-------PEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~---~~-------~~~~dv  217 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.+.+ +++... ..+..+-.+..   ..       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999988877764 99999999998877655 334321 12222111111   11       137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +|+++|
T Consensus        85 lv~~Ag   90 (260)
T 1nff_A           85 LVNNAG   90 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.01  E-value=0.017  Score=48.69  Aligned_cols=74  Identities=14%  Similarity=0.263  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H---HcCCCE-EeeCCCCccccc----------CC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      ..++++||+|+++++|.+.+..+... |++|+++++++++.+.+ +   +.+... .+..+-.+....          .+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999988776664 99999999998876654 2   234332 222211111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       101 ~id~lv~nAg  110 (279)
T 3sju_A          101 PIGILVNSAG  110 (279)
T ss_dssp             SCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            6899999987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.01  E-value=0.013  Score=49.85  Aligned_cols=43  Identities=19%  Similarity=0.230  Sum_probs=35.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ..+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~-G~~V~~~~r~~~~~~~~   52 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSN-GIMVVLTCRDVTKGHEA   52 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988877664 99999999998876544

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.01  E-value=0.021  Score=50.11  Aligned_cols=103  Identities=18%  Similarity=0.273  Sum_probs=74.1

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------  224 (310)
                      |.+|.|+| .|.+|...++.++.. |.+|++.+++. +.+.+.+.|...      .++.+....+|+|+-+.+.      
T Consensus       176 gktvGIIG-lG~IG~~vA~~l~~f-G~~V~~~d~~~-~~~~~~~~g~~~------~~l~ell~~aDvV~l~~Plt~~T~~  246 (365)
T 4hy3_A          176 GSEIGIVG-FGDLGKALRRVLSGF-RARIRVFDPWL-PRSMLEENGVEP------ASLEDVLTKSDFIFVVAAVTSENKR  246 (365)
T ss_dssp             SSEEEEEC-CSHHHHHHHHHHTTS-CCEEEEECSSS-CHHHHHHTTCEE------CCHHHHHHSCSEEEECSCSSCC---
T ss_pred             CCEEEEec-CCcccHHHHHhhhhC-CCEEEEECCCC-CHHHHhhcCeee------CCHHHHHhcCCEEEEcCcCCHHHHh
Confidence            78999999 999999999999984 99999998875 344455566531      1334445678999988752      


Q ss_pred             -h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       + ...+..|++++.++.++.-            .--+-+++.+.+.+|++.
T Consensus       247 li~~~~l~~mk~gailIN~aRG------------~~vde~aL~~aL~~g~i~  286 (365)
T 4hy3_A          247 FLGAEAFSSMRRGAAFILLSRA------------DVVDFDALMAAVSSGHIV  286 (365)
T ss_dssp             CCCHHHHHTSCTTCEEEECSCG------------GGSCHHHHHHHHHTTSSE
T ss_pred             hcCHHHHhcCCCCcEEEECcCC------------chhCHHHHHHHHHcCCce
Confidence             1 6788999999999988631            112344556667777765

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.00  E-value=0.025  Score=46.57  Aligned_cols=73  Identities=23%  Similarity=0.322  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++.+.+.    +.+... .+..+-.+..+          ...+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASK-GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999988777764 999999999988766552    334332 22222111111          1236


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (247)
T 3lyl_A           83 IDILVNNAG   91 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.00  E-value=0.033  Score=46.76  Aligned_cols=86  Identities=10%  Similarity=0.117  Sum_probs=61.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-------  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-------  224 (310)
                      .+|+|+|+ |.+|...+..+... |.+|+++++++++...+...+...+ ..+-.++.  ..++|+||.+++.       
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d~~--~~~~d~vi~~a~~~~~~~~~   80 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSRNPDQMEAIRASGAEPL-LWPGEEPS--LDGVTHLLISTAPDSGGDPV   80 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGG-TCEEEEEESCGGGHHHHHHTTEEEE-ESSSSCCC--CTTCCEEEECCCCBTTBCHH
T ss_pred             CcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEcChhhhhhHhhCCCeEE-Eecccccc--cCCCCEEEECCCccccccHH
Confidence            57999996 99999999888875 9999999999998887766554333 22222233  5689999999862       


Q ss_pred             hHHHHhhcc----cCCEEEEEe
Q 021628          225 CDKALKAVK----EGGRVVSII  242 (310)
Q Consensus       225 ~~~~~~~l~----~~G~~v~~g  242 (310)
                      ....++.+.    .-.+++.++
T Consensus        81 ~~~l~~a~~~~~~~~~~~v~~S  102 (286)
T 3ius_A           81 LAALGDQIAARAAQFRWVGYLS  102 (286)
T ss_dssp             HHHHHHHHHHTGGGCSEEEEEE
T ss_pred             HHHHHHHHHhhcCCceEEEEee
Confidence            133444443    336888775

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=95.98  E-value=0.022  Score=48.52  Aligned_cols=73  Identities=22%  Similarity=0.228  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~----------~~  213 (310)
                      .+++++|+|++|  ++|.+.++.+... |++|++++++++..+.++    +.+....+..+-.+....          ..
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999886  9999877766664 999999999876544443    334333332221121111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       108 ~iD~lVnnAG  117 (296)
T 3k31_A          108 SLDFVVHAVA  117 (296)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999886

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.98  E-value=0.017  Score=47.86  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H---HcCCCE-EeeCCCCcccc----------cCCCc
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADL-AIDYTKENIED----------LPEKF  215 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~-~~~~~~~~~~~----------~~~~~  215 (310)
                      +.+++|+|++|++|.+.+..+... |++|+++++++++.+.+ +   +.+... .+..+-.+...          ..+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999988877774 99999999988776544 2   224322 22221111111          12378


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++|+++|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999986

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.96  E-value=0.024  Score=47.66  Aligned_cols=94  Identities=20%  Similarity=0.152  Sum_probs=63.8

Q ss_pred             ccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628          132 LPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (310)
                      .||........++.... -.|.+++|.|.++.+|..+++++... |+.|+++.+....+                   .+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-gAtVtv~hs~T~~L-------------------~~  200 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-GCTVTVTHRFTRDL-------------------AD  200 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-TCEEEEECTTCSCH-------------------HH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCCcCH-------------------HH
Confidence            35544444444544433 47999999997777999999999986 99988876533222                   22


Q ss_pred             cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      ..+.+|+||.++|... -.-++++++..++.+|...
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          201 HVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCS
T ss_pred             HhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccc
Confidence            2346789999988431 1225678999999998654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.96  E-value=0.0082  Score=50.33  Aligned_cols=72  Identities=14%  Similarity=0.235  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc----------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED----------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~dvvi  219 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++++++++.+..... ..+..+-.+...          ..+++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEE-GHPLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4689999999999999988876664 9999999999887654422111 122211111111          113789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        93 nnAg   96 (266)
T 3p19_A           93 NNAG   96 (266)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.96  E-value=0.053  Score=44.10  Aligned_cols=96  Identities=23%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcC---CCE-EeeCCCCcc---cccCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLG---ADL-AIDYTKENI---EDLPEK  214 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g---~~~-~~~~~~~~~---~~~~~~  214 (310)
                      +....++++++||-+| +|. |..+..+++.. + .+|+.++.+++..+.+++.-   ... .+..+....   ......
T Consensus        67 l~~~~~~~~~~VLDlG-cG~-G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  143 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLG-ASA-GTTPSHVADIA-DKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEK  143 (230)
T ss_dssp             CCCCCCCTTCEEEEES-CCS-SHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCC
T ss_pred             ccccCCCCCCEEEEEc-ccC-CHHHHHHHHHc-CCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCcc
Confidence            4445678999999999 666 99999999884 5 68999999999887775421   111 122222210   111257


Q ss_pred             ccEEEeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          215 FDVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       215 ~dvvi~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      +|+|+.....       +..+.+.|+|+|+++..
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999865432       36677899999999885

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.96  E-value=0.011  Score=49.74  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEET   46 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4678999999999999988877664 99999999998877655

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=95.95  E-value=0.016  Score=48.38  Aligned_cols=89  Identities=17%  Similarity=0.126  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC-C----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~----  224 (310)
                      .+++||=+| +| .|.++..+++.  +.+|+.++.+++.++.+++...-.....+.+++......+|+|+.+.. +    
T Consensus        39 ~~~~vLDvG-cG-tG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~  114 (257)
T 4hg2_A           39 ARGDALDCG-CG-SGQASLGLAEF--FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDL  114 (257)
T ss_dssp             CSSEEEEES-CT-TTTTHHHHHTT--CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCH
T ss_pred             CCCCEEEEc-CC-CCHHHHHHHHh--CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhH
Confidence            457888888 55 58888888875  789999999998887765443222333333333333457999997643 2    


Q ss_pred             ---hHHHHhhcccCCEEEEEe
Q 021628          225 ---CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (310)
                         +.++.+.|+|||+++.+.
T Consensus       115 ~~~~~e~~rvLkpgG~l~~~~  135 (257)
T 4hg2_A          115 DRFWAELRRVARPGAVFAAVT  135 (257)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEEEE
Confidence               368889999999998775

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.94  E-value=0.0098  Score=50.28  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|.++||+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~   48 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFARE-GAKVVVTARNGNALAEL   48 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988877664 99999999998887665

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.93  E-value=0.031  Score=46.90  Aligned_cols=93  Identities=24%  Similarity=0.238  Sum_probs=62.6

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (310)
                      .||....+...++... .-.|.+++|.|..+.+|..+++++... |+.|+++.+....+                   .+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t~~L-------------------~~  200 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-KATVTTCHRFTTDL-------------------KS  200 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSSH-------------------HH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-CCeEEEEeCCchhH-------------------HH
Confidence            3554444444454443 347999999996667999999999986 99888775532222                   22


Q ss_pred             cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      ..+.+|+||.++|... -.-++++++..++.+|..
T Consensus       201 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          201 HTTKADILIVAVGKPNFITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             HHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCE
T ss_pred             hcccCCEEEECCCCCCCCCHHHcCCCcEEEEeccc
Confidence            3457889999988431 122567888888888754

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.92  E-value=0.046  Score=45.98  Aligned_cols=85  Identities=15%  Similarity=0.147  Sum_probs=59.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCC-CccEEEeCCCC--h
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPE-KFDVVFDAVGQ--C  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~dvvi~~~g~--~  225 (310)
                      .+|.|+| .|.+|.+.+..++.. |.  +|++.++++++.+.+++.|.. ....    +..+... ++|+||.|++.  .
T Consensus         2 ~~I~iIG-~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~aDvVilavp~~~~   75 (281)
T 2g5c_A            2 QNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTT----SIAKVEDFSPDFVMLSSPVRTF   75 (281)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEES----CGGGGGGTCCSEEEECSCHHHH
T ss_pred             cEEEEEe-cCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHHHCCCcccccC----CHHHHhcCCCCEEEEcCCHHHH
Confidence            3689999 999999988877774 76  899999999998888888753 1221    2223345 78999999873  1


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          ......++++..++.++
T Consensus        76 ~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           76 REIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             HHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHHHHhhCCCCcEEEECC
Confidence                33444566676666554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.92  E-value=0.035  Score=46.50  Aligned_cols=73  Identities=19%  Similarity=0.290  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+    ++.+... .+..+-.+...          ...+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999999999999988877774 99999999988776544    2234322 22222111111          1237


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       109 iD~li~~Ag  117 (272)
T 1yb1_A          109 VSILVNNAG  117 (272)
T ss_dssp             CSEEEECCC
T ss_pred             CcEEEECCC
Confidence            899999986

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.92  E-value=0.028  Score=46.79  Aligned_cols=76  Identities=18%  Similarity=0.245  Sum_probs=49.0

Q ss_pred             ccCCCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccc----------
Q 021628          147 AFSAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIED----------  210 (310)
Q Consensus       147 ~~~~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~----------  210 (310)
                      ....+++|+|+|++  +++|.+.+..+... |++|+++++++...+.++    +.+....+..+-.+...          
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKRE-GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHc-CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34578899999988  99999987776664 999999988765444443    33422222222111111          


Q ss_pred             cCCCccEEEeCCC
Q 021628          211 LPEKFDVVFDAVG  223 (310)
Q Consensus       211 ~~~~~dvvi~~~g  223 (310)
                      ...++|++|+++|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence            1247899999876

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.90  E-value=0.02  Score=47.72  Aligned_cols=42  Identities=21%  Similarity=0.274  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKA   47 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999998876554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.89  E-value=0.0076  Score=50.04  Aligned_cols=70  Identities=14%  Similarity=0.024  Sum_probs=47.1

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH---cCCCEEeeCCCCccccc-------CCCccEEEeC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADLAIDYTKENIEDL-------PEKFDVVFDA  221 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~-------~~~~dvvi~~  221 (310)
                      ++++|+|+++++|.+.++.+... |++|+++++++++.+.+.+   .+.+...- +.++....       ..++|++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            47999999999999988877774 9999999998877655432   24322111 22222111       1378999998


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus        80 Ag   81 (254)
T 1zmt_A           80 DI   81 (254)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.89  E-value=0.019  Score=48.33  Aligned_cols=73  Identities=16%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HH----cCCCE-EeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RS----LGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~----~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      .|.+++|+|+++++|.+.++.+... |++|++++++.++.+.. ++    .+... .+..+-.+...          ...
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRH-GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877764 99999999988775444 22    24332 22222111111          113


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7899999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.88  E-value=0.024  Score=47.07  Aligned_cols=42  Identities=24%  Similarity=0.213  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGE-GATVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHH
Confidence            4679999999999999988877764 99999999998877655

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.88  E-value=0.089  Score=43.00  Aligned_cols=95  Identities=19%  Similarity=0.193  Sum_probs=65.8

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcC-----CCEEeeCCCCc---ccccC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLG-----ADLAIDYTKEN---IEDLP  212 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g-----~~~~~~~~~~~---~~~~~  212 (310)
                      +....++||++||=+|  .+.|..+..+|+.. |.  +|++++.+++..+.+++.-     ...+. .+..+   .....
T Consensus        70 l~~l~ikpG~~VldlG--~G~G~~~~~la~~V-G~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~~~p~~~~~~~  145 (233)
T 4df3_A           70 LIELPVKEGDRILYLG--IASGTTASHMSDII-GPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDARFPEKYRHLV  145 (233)
T ss_dssp             CSCCCCCTTCEEEEET--CTTSHHHHHHHHHH-CTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCTTCGGGGTTTC
T ss_pred             hhhcCCCCCCEEEEec--CcCCHHHHHHHHHh-CCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-EeccCcccccccc
Confidence            4567899999999998  44588888899886 53  6899999999888775432     12222 22111   22234


Q ss_pred             CCccEEEeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          213 EKFDVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       213 ~~~dvvi~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      ..+|+|+.....       +.++.+.|+|+|+++..
T Consensus       146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            578988865542       25667889999999865

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.88  E-value=0.02  Score=47.40  Aligned_cols=70  Identities=20%  Similarity=0.374  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCcccc---cCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENIED---LPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~---~~~~~dvvi~~~g  223 (310)
                      -.+.+++|+|++|.+|.+.+..+... |++|++++++++..   ++++....+ |. .++...   ...++|++|+++|
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~---~~~~~~~~~~D~-~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELL---KRSGHRYVVCDL-RKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHH---HHTCSEEEECCT-TTCHHHHHHHSCCCSEEEECCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHH---HhhCCeEEEeeH-HHHHHHHHHHhcCCCEEEECCC
Confidence            46789999999999999988877774 99999999987443   344422222 22 112111   1237899999986

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.88  E-value=0.0083  Score=51.57  Aligned_cols=72  Identities=19%  Similarity=0.233  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecC---hhhHHHH-HHc----CCC-EEeeCCC-CcccccCCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS---TAKLDLL-RSL----GAD-LAIDYTK-ENIEDLPEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~---~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~~~dvv  218 (310)
                      .+.+++|+| +|++|.+++..+... |+ +|+++.|+   .++.+.+ +++    +.. .+....+ +++.+....+|+|
T Consensus       153 ~gk~~lVlG-aGG~g~aia~~L~~~-Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          153 IGKKMTICG-AGGAATAICIQAALD-GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCEEEEEC-CChHHHHHHHHHHHC-CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence            588999999 699999988877775 87 78889998   6665544 232    221 2233322 1122223478999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+|++
T Consensus       231 INaTp  235 (315)
T 3tnl_A          231 TNATG  235 (315)
T ss_dssp             EECSS
T ss_pred             EECcc
Confidence            99976

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.88  E-value=0.017  Score=48.43  Aligned_cols=73  Identities=15%  Similarity=0.248  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCC-EEeeCCCCcccc---c-------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGAD-LAIDYTKENIED---L-------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~---~-------~~~  214 (310)
                      .++++||+|+++++|.+.+..+... |++|+++++++++.+.+.    +.+.. ..+..+-.+...   .       ..+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARR-GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999988776664 999999999988765542    23322 222221111111   1       137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       106 iD~lvnnAg  114 (270)
T 3ftp_A          106 LNVLVNNAG  114 (270)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.87  E-value=0.018  Score=47.43  Aligned_cols=73  Identities=27%  Similarity=0.423  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCE-EeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      .+.+++|+|++|++|.+.++.+... |++|+++++ ++++.+.+    ++.+... .+..+-.+....          ..
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQ-GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999988877774 999999998 77765543    2234332 222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 2uvd_A           82 QVDILVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.87  E-value=0.047  Score=46.89  Aligned_cols=85  Identities=15%  Similarity=0.103  Sum_probs=61.2

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCC-EEeeCCCCcccc-cCCCccEEEeCCCC--h
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGAD-LAIDYTKENIED-LPEKFDVVFDAVGQ--C  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~-~~~~~dvvi~~~g~--~  225 (310)
                      .+|.|+| .|.+|...+..++.. |.  +|++.++++++.+.+.+.|.. ....    +..+ ...++|+||.|++.  .
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~----~~~~~~~~~aDvVilavp~~~~  107 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTT----SIAKVEDFSPDFVMLSSPVRTF  107 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEES----CTTGGGGGCCSEEEECSCGGGH
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHCCCcchhcC----CHHHHhhccCCEEEEeCCHHHH
Confidence            5899999 999999887777774 87  899999999999998888852 2221    2223 34578999999862  2


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          ......++++..++.++
T Consensus       108 ~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          108 REIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             HHHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHHHhhccCCCcEEEECC
Confidence                34445667777666654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.86  E-value=0.029  Score=46.00  Aligned_cols=73  Identities=19%  Similarity=0.377  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-----cCCCE-EeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-----LGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-----~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      .+.+++|+|++|.+|...++.+... |++|+++++++++.+.+.+     .+... .+..+-.+...          ...
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASA-GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999988877764 9999999998887655422     24322 22222111111          123


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        85 ~~d~vi~~Ag   94 (248)
T 2pnf_A           85 GIDILVNNAG   94 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999986

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=95.86  E-value=0.01  Score=52.23  Aligned_cols=88  Identities=18%  Similarity=0.322  Sum_probs=62.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC-CcccccCCCccEEEeCCCC---hHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK-ENIEDLPEKFDVVFDAVGQ---CDKA  228 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~dvvi~~~g~---~~~~  228 (310)
                      +|+|+| +|.+|..++..+..  ..+|.+.+++.++++.+++......++..+ +.+.+..+++|+||+|.+.   ..-+
T Consensus        18 kilvlG-aG~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~   94 (365)
T 3abi_A           18 KVLILG-AGNIGRAIAWDLKD--EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI   94 (365)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHhc--CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence            699999 59999998887764  568889999999988876554322333322 2233334689999999983   3455


Q ss_pred             HhhcccCCEEEEEeC
Q 021628          229 LKAVKEGGRVVSIIG  243 (310)
Q Consensus       229 ~~~l~~~G~~v~~g~  243 (310)
                      -.|+..+-.++....
T Consensus        95 ~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           95 KAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHTCEEEECCC
T ss_pred             HHHHhcCcceEeeec
Confidence            567777888887754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=95.86  E-value=0.018  Score=48.09  Aligned_cols=73  Identities=25%  Similarity=0.453  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-H----cCCCE-Ee--eCCCCc-ccc-------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-S----LGADL-AI--DYTKEN-IED-------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~----~g~~~-~~--~~~~~~-~~~-------~~~  213 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++++++++++.+. +    .+... .+  |-.+.+ ...       ...
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAA-GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877764 999999999988765542 2    34332 22  222211 111       113


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        98 ~id~lv~nAg  107 (266)
T 4egf_A           98 GLDVLVNNAG  107 (266)
T ss_dssp             SCSEEEEECC
T ss_pred             CCCEEEECCC
Confidence            7899999876

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.85  E-value=0.018  Score=47.57  Aligned_cols=73  Identities=22%  Similarity=0.376  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCE-EeeCCCCcccc---c-------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED---L-------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~~~~~~~~~~---~-------~~~  214 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+    ++.+... .+..+-.+...   .       ..+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999988877774 99999999988776543    2234332 22222111111   1       137


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        89 ~d~vi~~Ag   97 (255)
T 1fmc_A           89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999876

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.85  E-value=0.046  Score=43.26  Aligned_cols=91  Identities=20%  Similarity=0.288  Sum_probs=61.0

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCCE-EeeCCCCcccccCCCccEEEeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GADL-AIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      +.++ +||-+| +|. |..+..+++.  +.+++.++.+++..+.+++.    +... +...+-.......+.+|+|+.+.
T Consensus        28 ~~~~-~vLdiG-cG~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~  102 (202)
T 2kw5_A           28 IPQG-KILCLA-EGE-GRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF  102 (202)
T ss_dssp             SCSS-EEEECC-CSC-THHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC
T ss_pred             CCCC-CEEEEC-CCC-CHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh
Confidence            4566 999998 655 8888888875  77999999999888777543    3222 22222222222235799998764


Q ss_pred             CC---------hHHHHhhcccCCEEEEEeC
Q 021628          223 GQ---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       223 g~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..         +..+.+.|+|+|+++....
T Consensus       103 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  132 (202)
T 2kw5_A          103 CHLPSSLRQQLYPKVYQGLKPGGVFILEGF  132 (202)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred             hcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            31         2667789999999987753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.85  E-value=0.024  Score=46.91  Aligned_cols=73  Identities=22%  Similarity=0.332  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCE-EeeCCCCcccc---c-------CCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADL-AIDYTKENIED---L-------PEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~-~~~~~~~~~~~---~-------~~~  214 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+    ++.+... .+..+-.+...   .       ..+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEA-GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999988877774 99999999988765443    2234322 22222111111   1       136


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999876

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.85  E-value=0.017  Score=50.41  Aligned_cols=85  Identities=20%  Similarity=0.247  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.. .+.+.+.|...+     .++.+....+|+|+.+.+.     
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~-~~~~~~~g~~~~-----~~l~ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAF-GMNVLVWGRENS-KERARADGFAVA-----ESKDALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSHHH-HHHHHHTTCEEC-----SSHHHHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhC-CCEEEEECCCCC-HHHHHhcCceEe-----CCHHHHHhhCCEEEEeccCcHHHH
Confidence            478999999 999999999999995 999999988753 344556665321     1233344578999888751     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|++++.++.++
T Consensus       231 ~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             HhhCHHHHhhCCCCcEEEECC
Confidence              1 57788899999999886

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.84  E-value=0.026  Score=47.71  Aligned_cols=67  Identities=27%  Similarity=0.415  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCC---CEEeeCCCCcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~---~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+++|+| +|++|.+.+..+... |+ +++++.++.++.+.+ ++++.   ......     .+...++|+||+|++
T Consensus       125 ~~k~vlvlG-aGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~-----~~l~~~aDiIInaTp  196 (281)
T 3o8q_A          125 KGATILLIG-AGGAARGVLKPLLDQ-QPASITVTNRTFAKAEQLAELVAAYGEVKAQAF-----EQLKQSYDVIINSTS  196 (281)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----GGCCSCEEEEEECSC
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhc-CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeH-----HHhcCCCCEEEEcCc
Confidence            578999999 699999988877775 85 888999998886665 44442   122222     222368999999986

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.84  E-value=0.031  Score=46.44  Aligned_cols=73  Identities=23%  Similarity=0.315  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChh---hHHHHH-HcCCCEEeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLR-SLGADLAIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~---~~~~~~-~~g~~~~~~~~~~~~~~~----------~~  213 (310)
                      .+.+++|+|++  |.+|.+.++.+... |++|++++++++   ..+.+. +.+....+..+-.+....          ..
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999988  89999988877664 999999998875   333332 234222332221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        86 ~iD~lv~~Ag   95 (261)
T 2wyu_A           86 GLDYLVHAIA   95 (261)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999876

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.83  E-value=0.021  Score=49.75  Aligned_cols=104  Identities=18%  Similarity=0.226  Sum_probs=72.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++.+.+...  +....     .++.+.....|+|+.+.+.     
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~~~--g~~~~-----~~l~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGF-GLAIHYHNRTRLSHALEE--GAIYH-----DTLDSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHT--TCEEC-----SSHHHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHC-CCEEEEECCCCcchhhhc--CCeEe-----CCHHHHHhhCCEEEEecCCCHHHH
Confidence            367999999 999999999999985 999999998765443322  43221     1334445578999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|+++..++.++.-            .--+-+.+.+.+.+|++.
T Consensus       243 ~li~~~~l~~mk~gailIN~aRG------------~~vde~aL~~aL~~g~i~  283 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINISRG------------DLINDDALIEALRSKHLF  283 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSCG------------GGBCHHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCC------------chhCHHHHHHHHHhCCce
Confidence              1 5778899999999988621            112344556667777775

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.82  E-value=0.045  Score=45.96  Aligned_cols=93  Identities=23%  Similarity=0.231  Sum_probs=62.6

Q ss_pred             ccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628          132 LPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (310)
                      .||....+...++... .-.|.+++|.|..+.+|..+++++... |+.|+++.+....+                   .+
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-gAtVtv~h~~t~~L-------------------~~  199 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-GATVSVCHIKTKDL-------------------SL  199 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSCH-------------------HH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCchhH-------------------HH
Confidence            4544433444444433 347999999997777999999999986 99988876543322                   22


Q ss_pred             cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      ..+.+|+||.++|... -.-++++++..++.+|..
T Consensus       200 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          200 YTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             HHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCE
T ss_pred             HhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccC
Confidence            2356889999988431 122567888888888754

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.82  E-value=0.056  Score=43.79  Aligned_cols=91  Identities=13%  Similarity=0.144  Sum_probs=64.6

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCC-Cccccc-CCCccEEEeCCC-
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTK-ENIEDL-PEKFDVVFDAVG-  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~-~~~~dvvi~~~g-  223 (310)
                      ++++++||-+| +| .|..+..+++.  +.+++.++.+++.++.+++... ..++..+- +..... ...+|+|+.... 
T Consensus        46 ~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~  121 (226)
T 3m33_A           46 LTPQTRVLEAG-CG-HGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGP  121 (226)
T ss_dssp             CCTTCEEEEES-CT-TSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCC
T ss_pred             CCCCCeEEEeC-CC-CCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCH
Confidence            36889999998 54 48888888886  7899999999999988866432 22333222 122222 357999997643 


Q ss_pred             --ChHHHHhhcccCCEEEEEe
Q 021628          224 --QCDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 --~~~~~~~~l~~~G~~v~~g  242 (310)
                        .+..+.+.|+|+|+++..+
T Consensus       122 ~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          122 TSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             SGGGGGHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCcEEEEeC
Confidence              2578889999999999554

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.82  E-value=0.056  Score=42.06  Aligned_cols=114  Identities=11%  Similarity=0.039  Sum_probs=74.8

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC--C-EEeeCCCCcccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA--D-LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~~~~~~~~~  215 (310)
                      +......++++|+-+| +|. |..+..+++.  +.+++.++.+++..+.+++    .+.  . .+...+..+.......+
T Consensus        26 ~~~~~~~~~~~vldiG-~G~-G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  101 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVG-CGT-GGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDI  101 (192)
T ss_dssp             HHHHCCCTTCEEEEES-CTT-SHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCE
T ss_pred             HHhcCCCCCCEEEEEC-CCC-CHHHHHHHHh--cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCC
Confidence            3456778999999999 666 8888888886  3789999999998877754    333  1 12222111111111479


Q ss_pred             cEEEeCCC--C----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       216 dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      |+|+....  .    +..+.+.|+++|+++....             .........+++.+...
T Consensus       102 D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~-------------~~~~~~~~~~~l~~~g~  152 (192)
T 1l3i_A          102 DIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI-------------LLETKFEAMECLRDLGF  152 (192)
T ss_dssp             EEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC-------------BHHHHHHHHHHHHHTTC
T ss_pred             CEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec-------------CcchHHHHHHHHHHCCC
Confidence            99997643  2    3677889999999987642             23455666666665443

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.82  E-value=0.043  Score=45.55  Aligned_cols=90  Identities=13%  Similarity=0.089  Sum_probs=60.3

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCC---------------------C-EEeeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGA---------------------D-LAIDYT  204 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~---------------------~-~~~~~~  204 (310)
                      ..++.+||..| +| .|..+..+++.  |.+|+.++.+++-.+.+++ .+.                     . .+...+
T Consensus        66 ~~~~~~vLD~G-CG-~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           66 GQSGLRVFFPL-CG-KAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TCCSCEEEETT-CT-TCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             CCCCCeEEEeC-CC-CcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            46788999998 65 47888888875  8899999999999888853 321                     1 112222


Q ss_pred             CCccccc-CCCccEEEeCCC--C---------hHHHHhhcccCCEEEEE
Q 021628          205 KENIEDL-PEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       205 ~~~~~~~-~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~  241 (310)
                      -.++... .+.||+|++...  .         +.++.+.|+|||+++..
T Consensus       142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            2222221 257999997532  1         24577899999998644

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.82  E-value=0.016  Score=49.99  Aligned_cols=87  Identities=14%  Similarity=0.144  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      -.|.+|.|+| .|.+|...++.++.. |.+|++.++ ++++ ....++|... .    .+..+....+|+|+.+.+.   
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~-~~~~~~g~~~-~----~~l~ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASS-SDEASYQATF-H----DSLDSLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCH-HHHHHHTCEE-C----SSHHHHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcCh-hhhhhcCcEE-c----CCHHHHHhhCCEEEEeccCchH
Confidence            3578999999 999999999999985 999999998 7766 3455667532 1    1233334578999988762   


Q ss_pred             ----h-HHHHhhcccCCEEEEEeC
Q 021628          225 ----C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ----~-~~~~~~l~~~G~~v~~g~  243 (310)
                          + ...+..|++++.++.++.
T Consensus       216 t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhcCHHHHhhCCCCcEEEECCC
Confidence                1 456788999988888863

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.81  E-value=0.038  Score=46.87  Aligned_cols=42  Identities=29%  Similarity=0.426  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~-G~~V~~~~r~~~~~~~~   66 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKAT   66 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999988776544

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.79  E-value=0.036  Score=44.83  Aligned_cols=91  Identities=15%  Similarity=0.215  Sum_probs=62.4

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-----------EEeeCCCCcccccCCCcc
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-----------LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~d  216 (310)
                      ++++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++....           .+...+..........+|
T Consensus        28 ~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D  103 (235)
T 3sm3_A           28 LQEDDEILDIG-CG-SGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD  103 (235)
T ss_dssp             CCTTCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred             CCCCCeEEEEC-CC-CCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence            56889999998 55 48888888886  78999999999988888653211           122222222222245799


Q ss_pred             EEEeCCC-----C-------hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     +       ++.+.+.|+|+|+++...
T Consensus       104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  141 (235)
T 3sm3_A          104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE  141 (235)
T ss_dssp             EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            9986432     1       256778999999998774

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.79  E-value=0.24  Score=42.87  Aligned_cols=135  Identities=16%  Similarity=0.166  Sum_probs=79.1

Q ss_pred             CEEEEEcCCcchHHHHHHHHH-hhcCCcEE-EEecChhhHHHH-HHcCCCEEeeCCCCccccc--CCCccEEEeCCCC--
Q 021628          152 KSILVLGGAGGVGTMVIQLAK-HVFGASKV-AATSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ--  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~-~~~g~~vi-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~dvvi~~~g~--  224 (310)
                      -+|.|+| +|.+|...+..++ ...+.+++ +.++++++.+.+ +++|...+++.    ..+.  ..++|+|+.|++.  
T Consensus         9 ~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~----~~~~l~~~~~D~V~i~tp~~~   83 (346)
T 3cea_A            9 LRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTN----YKDMIDTENIDAIFIVAPTPF   83 (346)
T ss_dssp             EEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESC----HHHHHTTSCCSEEEECSCGGG
T ss_pred             ceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCC----HHHHhcCCCCCEEEEeCChHh
Confidence            3789999 8999998777766 43366765 456788887655 56776544421    2222  2379999999874  


Q ss_pred             -hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC-CeeEEecCCcccchh-hHHHHHHHHHcCCCC
Q 021628          225 -CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG-KVKAIIDPKGPFPFS-QTLEAFSHLESSRAT  301 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~  301 (310)
                       .+.+.+++..| +-+.+..+.         ....+..+++.++.++. ......  ...+.+. .+..+.+.+.++. .
T Consensus        84 h~~~~~~al~~G-~~v~~eKp~---------~~~~~~~~~l~~~a~~~~~~~~~~--~~~~r~~p~~~~~~~~i~~g~-i  150 (346)
T 3cea_A           84 HPEMTIYAMNAG-LNVFCEKPL---------GLDFNEVDEMAKVIKSHPNQIFQS--GFMRRYDDSYRYAKKIVDNGD-I  150 (346)
T ss_dssp             HHHHHHHHHHTT-CEEEECSCC---------CSCHHHHHHHHHHHHTCTTSCEEC--CCGGGTCHHHHHHHHHHHTTT-T
T ss_pred             HHHHHHHHHHCC-CEEEEcCCC---------CCCHHHHHHHHHHHHhCCCCeEEE--ecccccCHHHHHHHHHHHcCC-C
Confidence             36666777664 555553211         12345666777777776 655432  2223333 2444444444443 3


Q ss_pred             ccE
Q 021628          302 GKV  304 (310)
Q Consensus       302 ~k~  304 (310)
                      |++
T Consensus       151 G~i  153 (346)
T 3cea_A          151 GKI  153 (346)
T ss_dssp             CSE
T ss_pred             CCe
Confidence            554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=95.79  E-value=0.019  Score=47.35  Aligned_cols=42  Identities=19%  Similarity=0.260  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   46 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKA   46 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999988876655

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.79  E-value=0.027  Score=47.21  Aligned_cols=73  Identities=16%  Similarity=0.353  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H---HcCCCEE-eeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R---SLGADLA-IDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~~~-~~~~~~~~~~----------~~~~  214 (310)
                      .|.++||+|+++++|.+.+..+... |++|+++++++++.+.+ +   +.+.... +..+-.+...          ...+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVA-GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            5789999999999999988776664 99999999988876554 2   3343322 2111111111          1236


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       104 iD~lv~nAg  112 (271)
T 4ibo_A          104 VDILVNNAG  112 (271)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.78  E-value=0.027  Score=47.08  Aligned_cols=42  Identities=21%  Similarity=0.340  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++.+..
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   50 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAE-GANVLINGRREENVNET   50 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988776664 99999999998876544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.78  E-value=0.02  Score=48.14  Aligned_cols=73  Identities=21%  Similarity=0.355  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH---cCCCE-EeeCCCCcccc---c------CCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS---LGADL-AIDYTKENIED---L------PEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~---~------~~~~d  216 (310)
                      .|.+++|+|+++++|.+.++.+... |++|+++++++...+..++   .+... .+..+-.+...   .      ..++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARA-GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999988776664 9999999876544443333   23222 22221111111   1      13789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++|+++|
T Consensus       109 ~lv~nAg  115 (273)
T 3uf0_A          109 VLVNNAG  115 (273)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.77  E-value=0.039  Score=46.24  Aligned_cols=73  Identities=16%  Similarity=0.193  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChh---hHHHHH-HcCCCEEeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLR-SLGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~---~~~~~~-~~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      .+.+++|+|++  |++|.+.+..+... |++|++++++++   ..+.+. +.+....+..+-.+...          ...
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999988  99999988877764 999999998765   333332 23422222222111111          123


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        84 ~id~lv~nAg   93 (275)
T 2pd4_A           84 SLDFIVHSVA   93 (275)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7899999876

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.77  E-value=0.042  Score=49.13  Aligned_cols=92  Identities=18%  Similarity=0.291  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCCcc-c-ccCCCccEEEeCCCCh-
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKENI-E-DLPEKFDVVFDAVGQC-  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~-~~~~~~dvvi~~~g~~-  225 (310)
                      .+++|+|.| .|.+|...++.++.. |.+|++++.++++.+.+++.|...+. +..+.+. . .....+|+||-+.++. 
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~   80 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ   80 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChH
Confidence            456799999 899999999999985 99999999999999999988865443 2222221 1 1245799999998852 


Q ss_pred             -----HHHHhhcccCCEEEEEeC
Q 021628          226 -----DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 -----~~~~~~l~~~G~~v~~g~  243 (310)
                           -...+.+.+.-+++....
T Consensus        81 ~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           81 TNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEC
Confidence                 344566667777776543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.76  E-value=0.02  Score=47.71  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=34.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+.. . |++|++++++.++.+.+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~-g~~V~~~~r~~~~~~~~   45 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAA   45 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc-CCeEEEEeCChHHHHHH
Confidence            468999999999999987776555 5 89999999987765543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.76  E-value=0.015  Score=47.74  Aligned_cols=44  Identities=23%  Similarity=0.293  Sum_probs=37.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHc
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~  195 (310)
                      +.+++|+|++|.+|...++.+... |  .+|+++++++++.+.++++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~-g~~~~V~~~~r~~~~~~~l~~~   48 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSI   48 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhc-CCCcEEEEEecCHHHHHHHHhc
Confidence            578999999999999988877764 8  8999999998887777655

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.75  E-value=0.019  Score=50.20  Aligned_cols=87  Identities=23%  Similarity=0.342  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHH-hhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAK-HVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~-~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      -.|.+|.|+| .|.+|...++.++ .. |.+|++.++++++.+...++|....     .+..+....+|+|+.+++.   
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~-G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGL-GMKLVYYDVAPADAETEKALGAERV-----DSLEELARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhc-CCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhccCCEEEEeCCCChH
Confidence            3578999999 9999999999998 74 9999999988777666666665321     1223334467899888752   


Q ss_pred             h-----HHHHhhcccCCEEEEEe
Q 021628          225 C-----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 ~-----~~~~~~l~~~G~~v~~g  242 (310)
                      .     ...+..|+++..++.++
T Consensus       234 t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECS
T ss_pred             HHHHhhHHHHhcCCCCCEEEECC
Confidence            1     35667788887777665

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=95.75  E-value=0.041  Score=46.69  Aligned_cols=74  Identities=24%  Similarity=0.241  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCcc--hHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccc----------cC
Q 021628          149 SAGKSILVLGGAGG--VGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIED----------LP  212 (310)
Q Consensus       149 ~~g~~vlI~g~~g~--~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~----------~~  212 (310)
                      -.|++++|+|++|.  +|.+.+..+... |++|+++.++++..+.++    +.+....+..+-.+...          ..
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46789999999865  999887776664 999999998865443332    33432222222111111          12


Q ss_pred             CCccEEEeCCC
Q 021628          213 EKFDVVFDAVG  223 (310)
Q Consensus       213 ~~~dvvi~~~g  223 (310)
                      .++|++|+++|
T Consensus       108 g~iD~lVnnAG  118 (293)
T 3grk_A          108 GKLDFLVHAIG  118 (293)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47899999876

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.75  E-value=0.021  Score=47.59  Aligned_cols=42  Identities=31%  Similarity=0.408  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCc-chHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAG-GVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g-~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+++++|+|++| ++|.+.+..+... |++|+++++++++.+.+
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   63 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGET   63 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHH
Confidence            578999999875 8999988776664 99999999998876555

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.75  E-value=0.038  Score=46.02  Aligned_cols=73  Identities=23%  Similarity=0.330  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecCh---hhHHHHH-HcCCCEEeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST---AKLDLLR-SLGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~---~~~~~~~-~~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      .+.+++|+|++  |.+|.+.+..+... |++|+++++++   +..+.+. +.+....+..+-.+...          ...
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHC-CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46889999988  89999988877764 99999999876   3333332 23322233222111111          123


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999876

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.72  E-value=0.032  Score=46.10  Aligned_cols=71  Identities=25%  Similarity=0.398  Sum_probs=48.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCE-Ee--eCCCC-ccc----cc---CCCccEEE
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADL-AI--DYTKE-NIE----DL---PEKFDVVF  219 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~-~~--~~~~~-~~~----~~---~~~~dvvi  219 (310)
                      .+++|+|+++++|.+.+..+... |++|+++++++++++.+ ++++... .+  |-.+. +..    ..   ..++|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ-GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            36899999999999988877764 99999999998887665 3444322 22  22211 111    11   23789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.71  E-value=0.018  Score=48.38  Aligned_cols=73  Identities=18%  Similarity=0.301  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-Ee--eCCCCc-cccc------CCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AI--DYTKEN-IEDL------PEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~------~~~~  215 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++.+.+.    +.+... .+  +..+.. ....      ..++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGA-GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            5789999999999999988877764 999999999887655442    234332 22  221111 1100      1478


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++|+++|
T Consensus       111 D~lvnnAg  118 (275)
T 4imr_A          111 DILVINAS  118 (275)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.71  E-value=0.021  Score=47.05  Aligned_cols=41  Identities=20%  Similarity=0.212  Sum_probs=34.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~   42 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLAR-GDRVAALDLSAETLEET   42 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            578999999999999988877764 99999999998876655

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.70  E-value=0.043  Score=45.31  Aligned_cols=92  Identities=20%  Similarity=0.253  Sum_probs=63.5

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCccEEEe
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ..++++++||-+| +|. |..+..+++.  +.+++.++.+++..+.+++.    ... .+...+........+.+|+|+.
T Consensus        35 ~~~~~~~~vLDiG-~G~-G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~  110 (263)
T 2yqz_A           35 HPKGEEPVFLELG-VGT-GRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIV  110 (263)
T ss_dssp             CCSSSCCEEEEET-CTT-STTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred             cCCCCCCEEEEeC-CcC-CHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEE
Confidence            3668899999998 554 7778888875  78999999999998888653    122 2222222222222346999987


Q ss_pred             CCC-----C----hHHHHhhcccCCEEEEE
Q 021628          221 AVG-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       221 ~~g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      ...     .    +.++.+.|+|+|+++..
T Consensus       111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            643     2    36778899999999876

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.69  E-value=0.027  Score=47.14  Aligned_cols=73  Identities=29%  Similarity=0.442  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--C-EEeeCCCCcccc---c-------CCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--D-LAIDYTKENIED---L-------PEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~-~~~~~~~~~~~~---~-------~~~~  215 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+ ++++.  . ..+..+-.+...   .       ..++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999988877764 99999999988766544 34432  1 222222111111   1       1368


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++|+++|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99998876

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.69  E-value=0.025  Score=48.99  Aligned_cols=85  Identities=16%  Similarity=0.322  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+.+.+++....      ++.+....+|+|+.+++.     
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPF-GVQRFLYTGRQPRPEEAAEFQAEFV------STPELAAQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCCcchhHHHhcCceeC------CHHHHHhhCCEEEEeCCCChHHH
Confidence            467999999 899999999999885 9999999988776666666654321      223333578999998762     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       226 ~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence              1 45667888888887765

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.67  E-value=0.023  Score=49.61  Aligned_cols=38  Identities=26%  Similarity=0.445  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~-Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKD-GANIVIAAKTAQP   81 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESCCSC
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHC-CCEEEEEECChhh
Confidence            5789999999999999988776664 9999999987764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.67  E-value=0.018  Score=47.91  Aligned_cols=44  Identities=18%  Similarity=0.219  Sum_probs=34.7

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC---CcEEEEecChhhHHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG---ASKVAATSSTAKLDLLR  193 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g---~~vi~~~~~~~~~~~~~  193 (310)
                      -.+.+++|+|++|.+|.+.+..+... |   .+|+++++++++.+.++
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~-G~~~~~V~~~~r~~~~~~~~~   65 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNL-PQPPQHLFTTCRNREQAKELE   65 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTS-SSCCSEEEEEESCTTSCHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhc-CCCCcEEEEEecChhhhHHHH
Confidence            45679999999999999988877664 7   89999999877654443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.66  E-value=0.025  Score=47.46  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=34.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++ ++++.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~   52 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEGAAQRL   52 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHH
Confidence            4678999999999999988877764 999999999 87776554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.65  E-value=0.024  Score=46.60  Aligned_cols=72  Identities=19%  Similarity=0.216  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCC--C----Cccc---ccCCCccEEEe
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K----ENIE---DLPEKFDVVFD  220 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~----~~~~---~~~~~~dvvi~  220 (310)
                      .+++++|+|+++++|.+.++.+..  |.+|+++++++++.+.+.+......+..+  +    ....   ....++|++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR--DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            368899999999999987776643  77899999999888877664322222211  0    0011   11237899999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      ++|
T Consensus        82 ~Ag   84 (245)
T 3e9n_A           82 AAA   84 (245)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.65  E-value=0.045  Score=46.13  Aligned_cols=42  Identities=17%  Similarity=0.323  Sum_probs=33.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~  192 (310)
                      .++++||+|+++++|.+.+..+... |++|+++++ ++++.+.+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~   66 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKA-GANIVLNGFGAPDEIRTV   66 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEECCCCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHH
Confidence            4689999999999999988776664 999999988 55555444

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.64  E-value=0.032  Score=46.58  Aligned_cols=83  Identities=22%  Similarity=0.290  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCChH--
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD--  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~--  226 (310)
                      .| +++|+| +|.+|.+.+..+... |.++++..++.++.+.+ ++++..  +    .+..+. ..+|+|+.|++...  
T Consensus       116 ~~-~v~iiG-~G~~g~~~a~~l~~~-g~~v~v~~r~~~~~~~l~~~~~~~--~----~~~~~~-~~~Divi~~tp~~~~~  185 (263)
T 2d5c_A          116 KG-PALVLG-AGGAGRAVAFALREA-GLEVWVWNRTPQRALALAEEFGLR--A----VPLEKA-REARLLVNATRVGLED  185 (263)
T ss_dssp             CS-CEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHHTCE--E----CCGGGG-GGCSEEEECSSTTTTC
T ss_pred             CC-eEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhccc--h----hhHhhc-cCCCEEEEccCCCCCC
Confidence            46 999999 899999988887775 78888999998876555 556653  2    133444 68999999987321  


Q ss_pred             ---HH--HhhcccCCEEEEEe
Q 021628          227 ---KA--LKAVKEGGRVVSII  242 (310)
Q Consensus       227 ---~~--~~~l~~~G~~v~~g  242 (310)
                         ..  ...++++..++.++
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~  206 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLV  206 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESC
T ss_pred             CCCCCCCHHHcCCCCEEEEee
Confidence               11  45677777776655

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.63  E-value=0.048  Score=43.41  Aligned_cols=94  Identities=18%  Similarity=0.198  Sum_probs=63.1

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC----CEEeeCCCCcccccCCCccEEEeCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .++++++||-+| +|. |..+..+++. +..+++.++.+++..+.+++...    -.+...+........+.+|+|+...
T Consensus        39 ~~~~~~~vLdiG-cG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~  115 (215)
T 2pxx_A           39 ELRPEDRILVLG-CGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKG  115 (215)
T ss_dssp             GCCTTCCEEEET-CTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEES
T ss_pred             hcCCCCeEEEEC-CCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECc
Confidence            357889999999 665 8888888886 23489999999999888865321    1222222222222234799998631


Q ss_pred             C------------------------ChHHHHhhcccCCEEEEEeC
Q 021628          223 G------------------------QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       223 g------------------------~~~~~~~~l~~~G~~v~~g~  243 (310)
                      .                        .+..+.+.|+++|+++....
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  160 (215)
T 2pxx_A          116 TLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS  160 (215)
T ss_dssp             HHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             chhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence            1                        13677789999999998753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.63  E-value=0.071  Score=44.72  Aligned_cols=83  Identities=13%  Similarity=0.132  Sum_probs=58.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCCCC--h----
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVGQ--C----  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~g~--~----  225 (310)
                      +|.|+| .|.+|.+.+..+... |.+|+++++++++.+.+.+.|.. ...    .+..+. .++|+||.|++.  .    
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~-~~~D~vi~av~~~~~~~~~   74 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAG----QDLSLL-QTAKIIFLCTPIQLILPTL   74 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEE----SCGGGG-TTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhCCCCcccc----CCHHHh-CCCCEEEEECCHHHHHHHH
Confidence            588999 899999887777664 88999999999998888877753 222    122334 678999999873  2    


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      ......++++..++.++
T Consensus        75 ~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           75 EKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHGGGSCTTCEEEECC
T ss_pred             HHHHhhCCCCCEEEECC
Confidence            23334555666666553

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.63  E-value=0.02  Score=49.96  Aligned_cols=86  Identities=24%  Similarity=0.297  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++. ..+++|....     .++.+.....|+|+.+++.     
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~-G~~V~~~d~~~~~~-~~~~~g~~~~-----~~l~ell~~aDvV~l~~P~t~~t~  238 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAF-GFNVLFYDPYLSDG-VERALGLQRV-----STLQDLLFHSDCVTLHCGLNEHNH  238 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCTT-HHHHHTCEEC-----SSHHHHHHHCSEEEECCCCCTTCT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEECCCcchh-hHhhcCCeec-----CCHHHHHhcCCEEEEcCCCCHHHH
Confidence            578999999 999999999999985 99999998865542 2345565321     1223334578999988752     


Q ss_pred             --h-HHHHhhcccCCEEEEEeC
Q 021628          225 --C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (310)
                        + ...+..|+++..++.++.
T Consensus       239 ~li~~~~l~~mk~gailIN~ar  260 (347)
T 1mx3_A          239 HLINDFTVKQMRQGAFLVNTAR  260 (347)
T ss_dssp             TSBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhHHHHHhcCCCCCEEEECCC
Confidence              1 567788999988888863

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.62  E-value=0.032  Score=46.32  Aligned_cols=37  Identities=24%  Similarity=0.309  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +.+++|+|+++++|.+.+..+... |++|+++++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~   38 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD-GFDIAVADLPQQE   38 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECGGGH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcch
Confidence            578999999999999988877664 9999999998776

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.62  E-value=0.02  Score=47.25  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC-hhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~-~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|++++++ +++.+.+
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~   48 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARA-GAKVGLHGRKAPANIDET   48 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCCTTHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEECCCchhhHHHH
Confidence            4679999999999999988877774 9999999998 6665544

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.62  E-value=0.016  Score=47.50  Aligned_cols=73  Identities=19%  Similarity=0.152  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+|+|+|++|.+|...+..+.... |.+|+++++++++.+.+ .-+...+ .+..+ +.+....+++|+||++++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            46789999999999999888776632 68999999988766543 1122221 12222 122223357899999876

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.61  E-value=0.076  Score=42.38  Aligned_cols=93  Identities=20%  Similarity=0.110  Sum_probs=66.3

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE--EeeCCCCcccccCCCccEEEeCCC
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ....++.+||-+| +|. |..+..+++.  +.+++.++.+++.++.+++.+...  ++..+-.+. .....+|+|+....
T Consensus        42 ~~~~~~~~vLdiG-~G~-G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~  116 (218)
T 3ou2_A           42 RAGNIRGDVLELA-SGT-GYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW  116 (218)
T ss_dssp             TTTTSCSEEEEES-CTT-SHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred             hcCCCCCeEEEEC-CCC-CHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEech
Confidence            4477888999998 554 8888888886  789999999999999987765222  222222222 23457999986542


Q ss_pred             -----C------hHHHHhhcccCCEEEEEeC
Q 021628          224 -----Q------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       224 -----~------~~~~~~~l~~~G~~v~~g~  243 (310)
                           .      +..+.+.|+|+|+++....
T Consensus       117 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          117 LAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence                 1      2567789999999988754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.61  E-value=0.045  Score=46.16  Aligned_cols=73  Identities=15%  Similarity=0.274  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HH---cCCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RS---LGADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~---~g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++.+++++.+.+ ++   .+... .+..+-.+...          ...+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4679999999999999988877774 99999988887776544 22   24332 22222111111          1246


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      +|++|+++|
T Consensus       122 id~li~~Ag  130 (285)
T 2c07_A          122 VDILVNNAG  130 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999886

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.60  E-value=0.025  Score=47.06  Aligned_cols=42  Identities=24%  Similarity=0.328  Sum_probs=34.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++ .+.+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~   45 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKV   45 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHc-CCEEEEEeCCcchHHHHH
Confidence            4678999999999999988877774 9999999998776 5443

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.59  E-value=0.095  Score=45.99  Aligned_cols=99  Identities=14%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             HHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecC----hhh---------HHHHHHcCCCEEeeC
Q 021628          139 AYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS----TAK---------LDLLRSLGADLAIDY  203 (310)
Q Consensus       139 a~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~----~~~---------~~~~~~~g~~~~~~~  203 (310)
                      .+.+++..+ --+..+|+|.| +|..|.++++++..+ |. ++++++++    .+|         ..++++...    ..
T Consensus       179 l~~A~~i~g~~l~~~kVVv~G-AGaAG~~iAkll~~~-G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~  252 (388)
T 1vl6_A          179 FLNALKLTEKKIEEVKVVVNG-IGAAGYNIVKFLLDL-GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ER  252 (388)
T ss_dssp             HHHHHHHHTCCTTTCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TC
T ss_pred             HHHHHHHhCCCCCCcEEEEEC-CCHHHHHHHHHHHhC-CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cC
Confidence            344444333 33567999999 999999999999987 87 78888887    555         233333221    11


Q ss_pred             CCCcccccCCCccEEEeCCC-C--hHHHHhhcccCCEEEEEeC
Q 021628          204 TKENIEDLPEKFDVVFDAVG-Q--CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       204 ~~~~~~~~~~~~dvvi~~~g-~--~~~~~~~l~~~G~~v~~g~  243 (310)
                      ...++.+..+++|++|-+++ .  .++.++.|+++..++.++.
T Consensus       253 ~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          253 LSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             chhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence            12233444567899998875 2  3777888887765555544

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.59  E-value=0.047  Score=46.21  Aligned_cols=95  Identities=22%  Similarity=0.221  Sum_probs=63.9

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      .+||+.......++... --.|.+++|+|+...+|.-+++++... |+.|+++.+..+.                   +.
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t~~-------------------L~  203 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKTAH-------------------LD  203 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSS-------------------HH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-CCeEEEEECCccc-------------------HH
Confidence            34555444444444443 347899999996557899999999986 9998888644222                   23


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+||.++|..+ -.-++++++..++.+|...
T Consensus       204 ~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          204 EEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             HHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC
T ss_pred             HHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCC
Confidence            33457899999998532 1224578999999998643

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.59  E-value=0.043  Score=46.42  Aligned_cols=42  Identities=24%  Similarity=0.340  Sum_probs=33.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~~~~~~~~  192 (310)
                      .+++++|+|+++++|.+.+..+... |+   +|+++.+++++++.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~   76 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEA-SNGDMKLILAARRLEKLEEL   76 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCCCceEEEEECCHHHHHHH
Confidence            4789999999999999877655443 55   899999998887665

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=95.57  E-value=0.027  Score=43.29  Aligned_cols=92  Identities=15%  Similarity=0.103  Sum_probs=64.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ...++++++||-+| +| .|..+..+++.. . +++.++.+++..+.+++.... .+...+   .......+|+|+....
T Consensus        12 ~~~~~~~~~vLDiG-~G-~G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~   84 (170)
T 3i9f_A           12 NIFEGKKGVIVDYG-CG-NGFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANS   84 (170)
T ss_dssp             HHHSSCCEEEEEET-CT-TCTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred             hcCcCCCCeEEEEC-CC-CCHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccc
Confidence            34567889999998 54 488888888873 4 899999999988888664322 222222   2223457999986543


Q ss_pred             -----C----hHHHHhhcccCCEEEEEeC
Q 021628          224 -----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       224 -----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                           .    ++++.+.|+++|+++....
T Consensus        85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~  113 (170)
T 3i9f_A           85 FHDMDDKQHVISEVKRILKDDGRVIIIDW  113 (170)
T ss_dssp             STTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence                 1    3778899999999998754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.56  E-value=0.051  Score=45.82  Aligned_cols=73  Identities=18%  Similarity=0.264  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecChh---hHHHHH-HcCCCEEeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSSTA---KLDLLR-SLGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~~---~~~~~~-~~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      .+.+++|+|++  |++|.+.+..+... |++|++++++++   ..+.+. +.+....+..+-.+...          ..+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHRE-GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999988  89999988877764 999999998875   333332 23322222222111111          123


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        99 ~iD~lv~~Ag  108 (285)
T 2p91_A           99 SLDIIVHSIA  108 (285)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999876

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.56  E-value=0.03  Score=48.58  Aligned_cols=84  Identities=26%  Similarity=0.381  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++ +...++|...      .++.+....+|+|+.+++.     
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~------~~l~~~l~~aDvVil~vp~~~~t~  219 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGF-NMRILYYSRTRKE-EVERELNAEF------KPLEDLLRESDFVVLAVPLTRETY  219 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCH-HHHHHHCCEE------CCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhC-CCEEEEECCCcch-hhHhhcCccc------CCHHHHHhhCCEEEECCCCChHHH
Confidence            467999999 899999999999885 9999999998777 5555666421      1223334578999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       220 ~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          220 HLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             TCBCHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence              1 35677888888888775

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.55  E-value=0.05  Score=45.71  Aligned_cols=74  Identities=14%  Similarity=0.200  Sum_probs=47.9

Q ss_pred             CCCCEEEEEcCC--cchHHHHHHHHHhhcCCcEEEEecCh--hhHHHHHH-cCCCEEeeCCCCcccc----------cCC
Q 021628          149 SAGKSILVLGGA--GGVGTMVIQLAKHVFGASKVAATSST--AKLDLLRS-LGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       149 ~~g~~vlI~g~~--g~~G~~a~~la~~~~g~~vi~~~~~~--~~~~~~~~-~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      -.+.+++|+|++  +++|.+.+..+... |++|+++++++  +..+.+.+ .+....+..+-.+...          ...
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHRE-GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHc-CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            457899999988  56999877766664 99999999877  55555533 3332333222111111          124


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      .+|++|+++|
T Consensus       103 ~id~li~nAg  112 (280)
T 3nrc_A          103 GLDAIVHSIA  112 (280)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6899999876

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.54  E-value=0.075  Score=39.12  Aligned_cols=71  Identities=21%  Similarity=0.206  Sum_probs=49.8

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEe-eCCCCc-cc-ccCCCccEEEeCCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAI-DYTKEN-IE-DLPEKFDVVFDAVGQ  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~-~~~~~~-~~-~~~~~~dvvi~~~g~  224 (310)
                      .+|+|+| .|.+|...++.+... |.+|+++++++++.+.+.+ ++...+. +..+.. +. ....++|+||.+++.
T Consensus         5 m~i~IiG-~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            5 MYIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence            5799999 799999988887774 8999999999988877753 5653322 221111 11 124579999999874

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.54  E-value=0.13  Score=41.85  Aligned_cols=95  Identities=21%  Similarity=0.259  Sum_probs=63.8

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCC---EEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGAD---LAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      ......++.+||-+| +| .|..+..+++.  +. +++.++.+++..+.+++....   .+...+-.........+|+|+
T Consensus        37 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  112 (243)
T 3bkw_A           37 AMLPEVGGLRIVDLG-CG-FGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAY  112 (243)
T ss_dssp             HHSCCCTTCEEEEET-CT-TCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEE
T ss_pred             HhccccCCCEEEEEc-Cc-CCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEE
Confidence            344556889999998 55 37778888775  55 899999999999888765421   122222111122234799998


Q ss_pred             eCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          220 DAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ....     .    ++.+.+.|+|+|+++...
T Consensus       113 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          113 SSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            6543     1    367788999999998754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.53  E-value=0.038  Score=46.47  Aligned_cols=35  Identities=29%  Similarity=0.426  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .+++++|+|+++++|.+.++.+... |++|++++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~-G~~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEA-GADIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeCC
Confidence            5789999999999999988877774 9999999986

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.53  E-value=0.093  Score=43.94  Aligned_cols=96  Identities=15%  Similarity=0.146  Sum_probs=65.6

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHc-----CCCE--EeeCCCCcccccCCCc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL-----GADL--AIDYTKENIEDLPEKF  215 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~-----g~~~--~~~~~~~~~~~~~~~~  215 (310)
                      ....++++++||-.| +| .|..+..+++... +.+++.++.+++..+.+++.     |.+.  +...+-.+ ....+.+
T Consensus       104 ~~~~~~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~f  180 (275)
T 1yb2_A          104 MRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMY  180 (275)
T ss_dssp             --CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCE
T ss_pred             HHcCCCCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCc
Confidence            456788999999998 55 6888888888632 56899999999988877542     4321  22222111 1112469


Q ss_pred             cEEEeCCCC----hHHHHhhcccCCEEEEEe
Q 021628          216 DVVFDAVGQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       216 dvvi~~~g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      |+|+.....    ++.+.+.|+++|+++...
T Consensus       181 D~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          181 DAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             EEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             cEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            999976553    478889999999998775

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.52  E-value=0.026  Score=47.25  Aligned_cols=73  Identities=19%  Similarity=0.309  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCE-EeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++ ++++.+.+    ++.+... .+..+-.+....          .+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAA-GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988776664 999999888 65555443    2334332 222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       106 ~id~lv~nAg  115 (269)
T 4dmm_A          106 RLDVLVNNAG  115 (269)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999986

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.52  E-value=0.026  Score=46.93  Aligned_cols=73  Identities=19%  Similarity=0.212  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHHH----HcCCCE-EeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLR----SLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++ .+++++.+.+.    +.+... .+..+-.+....          ..
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~-G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAEN-GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999988877764 9999987 77877665542    234332 222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999986

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.52  E-value=0.029  Score=46.69  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++++++++.+.+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~-G~~V~~~~r~~~~~~~~   54 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNEC   54 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877774 99999999988776544

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.52  E-value=0.061  Score=45.12  Aligned_cols=88  Identities=13%  Similarity=0.187  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      ....+.+++|+| +|+.|.+++..+... |+ +++++.|+.+|.+.+ ++++.+.  ..   ...  ...+|+||+|++.
T Consensus       115 ~~~~~~~vlvlG-aGgaarav~~~L~~~-G~~~i~v~nRt~~ka~~la~~~~~~~--~~---~~~--~~~~DivInaTp~  185 (271)
T 1npy_A          115 HLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYAY--IN---SLE--NQQADILVNVTSI  185 (271)
T ss_dssp             TCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCEE--ES---CCT--TCCCSEEEECSST
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHcCCcc--ch---hhh--cccCCEEEECCCC
Confidence            344678999999 899999988877775 86 789999998886555 5566421  11   111  2478999999863


Q ss_pred             hH----------HHHhhcccCCEEEEEeC
Q 021628          225 CD----------KALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ~~----------~~~~~l~~~G~~v~~g~  243 (310)
                      ..          .....+.++..++.+..
T Consensus       186 gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          186 GMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             TCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             CccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            11          11245666666666643

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=95.51  E-value=0.11  Score=42.64  Aligned_cols=94  Identities=21%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--C-EEeeCCCCcccccCCCccEEEeC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--D-LAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      .....++.+||-+| +|. |..+..+++. +..+++.++.+++.++.+++...  . .+...+-.+.....+.+|+|+..
T Consensus        39 ~~~~~~~~~vLD~G-cG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  115 (253)
T 3g5l_A           39 MLPDFNQKTVLDLG-CGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSS  115 (253)
T ss_dssp             TCCCCTTCEEEEET-CTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEE
T ss_pred             hhhccCCCEEEEEC-CCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEc
Confidence            44556889999998 444 8888888886 23489999999999888865431  1 12222222222224579999876


Q ss_pred             CC-----C----hHHHHhhcccCCEEEEE
Q 021628          222 VG-----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       222 ~g-----~----~~~~~~~l~~~G~~v~~  241 (310)
                      ..     .    ++.+.+.|+|+|+++..
T Consensus       116 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~  144 (253)
T 3g5l_A          116 LALHYIASFDDICKKVYINLKSSGSFIFS  144 (253)
T ss_dssp             SCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence            42     1    36778899999999876

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.51  E-value=0.035  Score=46.72  Aligned_cols=35  Identities=23%  Similarity=0.272  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      -.|++++|+|+++++|.+.++.+... |++|+++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~-G~~V~~~~r   47 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAE-GADIIACDI   47 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEec
Confidence            46789999999999999988877664 999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.51  E-value=0.048  Score=46.36  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|.+++|+|+++++|.+.+..+... |++|++++++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~   61 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLARE-GADIIAIDVC   61 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecc
Confidence            5789999999999999988776664 9999999876

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.50  E-value=0.0072  Score=48.03  Aligned_cols=70  Identities=17%  Similarity=0.191  Sum_probs=46.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g  223 (310)
                      .+|+|+|++|.+|...+..+... |.+|+++++++++.......+. .++..+-.+   +....+++|+||++++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCS-EEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChhhcccccCCce-EEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            58999999999999988887775 8999999998776532111112 222222111   2223357899999987

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.50  E-value=0.035  Score=47.10  Aligned_cols=72  Identities=29%  Similarity=0.430  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-------hhHHHHH---HcCCCEE-eeCCC-CcccccCCCccEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-------AKLDLLR---SLGADLA-IDYTK-ENIEDLPEKFDVV  218 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-------~~~~~~~---~~g~~~~-~~~~~-~~~~~~~~~~dvv  218 (310)
                      +.+|+|+|++|.+|...+..+... |.+|+++++++       ++.+.++   ..+...+ .+..+ +.+....+++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            457999999999999988877775 89999999976       5544333   3344322 12222 1222234589999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |++++
T Consensus        81 i~~a~   85 (307)
T 2gas_A           81 ICAAG   85 (307)
T ss_dssp             EECSS
T ss_pred             EECCc
Confidence            99987

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.49  E-value=0.035  Score=46.81  Aligned_cols=35  Identities=29%  Similarity=0.318  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|++++|+|+++++|.+.+..+... |++|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEecc
Confidence            5789999999999999988776664 9999999876

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=95.47  E-value=0.059  Score=43.17  Aligned_cols=99  Identities=18%  Similarity=0.191  Sum_probs=65.3

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~  215 (310)
                      +....+.++++||-+| +| .|..+..+++.. ...+++.++.+++..+.+++    .+..  .+...+..+.......+
T Consensus        30 ~~~~~~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f  107 (219)
T 3dh0_A           30 LKEFGLKEGMTVLDVG-TG-AGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTV  107 (219)
T ss_dssp             HHHHTCCTTCEEEESS-CT-TCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCE
T ss_pred             HHHhCCCCCCEEEEEe-cC-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCe
Confidence            3455678899999998 44 377777887763 13689999999988777743    2322  22222222222223469


Q ss_pred             cEEEeCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          216 DVVFDAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       216 dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+|+....     .    ++.+.+.|+++|+++....
T Consensus       108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~  144 (219)
T 3dh0_A          108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW  144 (219)
T ss_dssp             EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence            99986543     1    3678889999999998753

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.47  E-value=0.027  Score=47.54  Aligned_cols=37  Identities=24%  Similarity=0.470  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+.+++|+|+++++|.+.+..+... |++|++++++++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~   44 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAAD-GANVALVAKSAE   44 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTT-TCEEEEEESCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECChh
Confidence            4789999999999999988777664 999999999766

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.47  E-value=0.036  Score=46.47  Aligned_cols=35  Identities=26%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|.++||+|+++++|.+.+..+... |++|++++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~   46 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAAD-GADIIAVDLC   46 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEecc
Confidence            5789999999999999987776664 9999999876

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.45  E-value=0.041  Score=46.17  Aligned_cols=40  Identities=20%  Similarity=0.333  Sum_probs=34.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+++|+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~-G~~V~~~~r~~~~~~~~   61 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA-GWSLVLTGRREERLQAL   61 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            78999999999999988877764 99999999998887665

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.44  E-value=0.025  Score=46.82  Aligned_cols=73  Identities=22%  Similarity=0.319  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCCEE-eeCCCCccc---cc-------CCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADLA-IDYTKENIE---DL-------PEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~~~-~~~~~~~~~---~~-------~~~~d  216 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++  .+.+++.+.... +..+-.+..   ..       ..++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARA-GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999988877764 9999999887652  222333343322 211111111   11       13789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++|+++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999986

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.43  E-value=0.12  Score=43.89  Aligned_cols=85  Identities=18%  Similarity=0.141  Sum_probs=59.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---HHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---DKA  228 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~~~  228 (310)
                      .+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|......    +..+....+|+||.|++..   +..
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~~~----~~~e~~~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRA-GLSTWGADLNPQACANLLAEGACGAAA----SAREFAGVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEES----SSTTTTTTCSEEEECCSSHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHcCCccccC----CHHHHHhcCCEEEEECCCHHHHHHH
Confidence            4799999 999999877776664 899999999999999988877654121    2233345788999888742   333


Q ss_pred             -------HhhcccCCEEEEEe
Q 021628          229 -------LKAVKEGGRVVSII  242 (310)
Q Consensus       229 -------~~~l~~~G~~v~~g  242 (310)
                             ...++++..++..+
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECS
T ss_pred             HhChhhHHhhCCCCCEEEecC
Confidence                   24456666666554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.41  E-value=0.027  Score=47.07  Aligned_cols=37  Identities=24%  Similarity=0.460  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++.++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLEL-GAQVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHc-CCEEEEEECCch
Confidence            6899999999999999988877764 999999998654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.046  Score=46.04  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCE-EeeCCCCccccc----------C
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIEDL----------P  212 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~~~~~----------~  212 (310)
                      -.+.+++|+|+++++|.+.+..+... |++|+++++ ++++.+.+    ++.+... .+..+-.+....          .
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAAS-GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999988877764 999999985 66655443    2334332 222221111111          1


Q ss_pred             CCccEEEeCCC
Q 021628          213 EKFDVVFDAVG  223 (310)
Q Consensus       213 ~~~dvvi~~~g  223 (310)
                      .++|++|+++|
T Consensus       106 g~iD~lvnnAg  116 (280)
T 4da9_A          106 GRIDCLVNNAG  116 (280)
T ss_dssp             SCCCEEEEECC
T ss_pred             CCCCEEEECCC
Confidence            37899999876

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.40  E-value=0.031  Score=48.43  Aligned_cols=103  Identities=18%  Similarity=0.257  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.  +++. ... .    .+..+.....|+|+.+.+.     
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~~~-~----~~l~ell~~aDvV~l~~p~~~~t~  214 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGF-GAKVITYDIFRNPE--LEKK-GYY-V----DSLDDLYKQADVISLHVPDVPANV  214 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCHH--HHHT-TCB-C----SCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCcchh--HHhh-Cee-c----CCHHHHHhhCCEEEEcCCCcHHHH
Confidence            477999999 999999999999985 99999999877654  2332 221 1    1233334578999998862     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...+..|++++.++.++.-            ..-+-+.+.+.+.++++.
T Consensus       215 ~li~~~~l~~mk~ga~lIn~arg------------~~vd~~aL~~aL~~g~i~  255 (333)
T 1j4a_A          215 HMINDESIAKMKQDVVIVNVSRG------------PLVDTDAVIRGLDSGKIF  255 (333)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCG------------GGBCHHHHHHHHHHTSEE
T ss_pred             HHHhHHHHhhCCCCcEEEECCCC------------cccCHHHHHHHHHhCCce
Confidence              1 4677899999999888631            112235556666677665

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.38  E-value=0.013  Score=50.68  Aligned_cols=70  Identities=19%  Similarity=0.259  Sum_probs=46.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +|+|+|++|.+|...+..+... |.+|+++++++++.+.+.+.+...+ .+..+ +.+....+++|+||++++
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAA-GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            7999999999999988877774 8999999998776543333233222 12222 122233458999999976

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.38  E-value=0.064  Score=46.46  Aligned_cols=73  Identities=18%  Similarity=0.235  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh----hHHHHHHc------CCCEEeeCCCCc---ccccCCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSL------GADLAIDYTKEN---IEDLPEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~----~~~~~~~~------g~~~~~~~~~~~---~~~~~~~~d  216 (310)
                      .+.+|+|+|++|.+|...+..+... |.+|++++++..    ....+.+.      ..-.++..+-.+   +.....++|
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKL-NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            3579999999999999988877774 999999998543    23333332      211222222111   223345899


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      +||++++
T Consensus       103 ~Vih~A~  109 (351)
T 3ruf_A          103 HVLHQAA  109 (351)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.38  E-value=0.042  Score=46.08  Aligned_cols=38  Identities=26%  Similarity=0.455  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .+++++|+|+++++|.+.+..+... |++|++++++.++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~   42 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARD-GANVAIAAKSAVA   42 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCEEEEEeccchh
Confidence            4789999999999999988776664 9999999987653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.37  E-value=0.021  Score=47.83  Aligned_cols=42  Identities=24%  Similarity=0.316  Sum_probs=33.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      ....+++|||+|+++++|.+.+..+... |++|+++++++++.
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~   51 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRY-GAKVVSVSLDEKSD   51 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCC--C
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCchhc
Confidence            3457899999999999999988877664 99999999876654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.37  E-value=0.027  Score=46.73  Aligned_cols=42  Identities=17%  Similarity=0.243  Sum_probs=34.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++ ++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~   48 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSV   48 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEcCCChHHHHHH
Confidence            4689999999999999988877764 999999999 77665443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.36  E-value=0.046  Score=45.99  Aligned_cols=35  Identities=29%  Similarity=0.304  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .|.++||+|+++++|.+.+..+... |++|++++++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~~~   43 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEE-GADIILFDIC   43 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCeEEEEccc
Confidence            5789999999999999988777664 9999999876

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.35  E-value=0.058  Score=46.89  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcCC-C-EEe--eCCC-CcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGA-D-LAI--DYTK-ENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g~-~-~~~--~~~~-~~~~~~~~~~dvvi~~~  222 (310)
                      .+.+|+|+|++|.+|...+..+....|. +|+++++++.+...+. ++.. . ..+  +..+ +......+++|+||+++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A   99 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA   99 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence            4689999999999999988766652276 8999999988776553 3321 1 122  2222 11222345899999998


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      +
T Consensus       100 a  100 (344)
T 2gn4_A          100 A  100 (344)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.35  E-value=0.045  Score=45.21  Aligned_cols=73  Identities=16%  Similarity=0.252  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecCh--hhHHHHHHc--CCC-EEe--eCCCC--ccccc-------C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSST--AKLDLLRSL--GAD-LAI--DYTKE--NIEDL-------P  212 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~--~~~~~~~~~--g~~-~~~--~~~~~--~~~~~-------~  212 (310)
                      .+.+++|+|++|++|.+.+..+... |++ |+++++++  +..+.+.+.  +.. ..+  |..+.  +....       .
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~-G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHC-CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            4679999999999999988877764 887 88888865  334444333  222 122  22221  11110       1


Q ss_pred             CCccEEEeCCC
Q 021628          213 EKFDVVFDAVG  223 (310)
Q Consensus       213 ~~~dvvi~~~g  223 (310)
                      .++|++|+++|
T Consensus        83 g~id~lv~~Ag   93 (254)
T 1sby_A           83 KTVDILINGAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37899999987

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.34  E-value=0.011  Score=50.95  Aligned_cols=84  Identities=14%  Similarity=0.251  Sum_probs=61.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+.     ......  ..++.+....+|+|+.+.+.     
T Consensus       136 ~gktvGIiG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~-----~~~~~~--~~~l~ell~~aDvV~l~lPlt~~t~  206 (324)
T 3evt_A          136 TGQQLLIYG-TGQIGQSLAAKASAL-GMHVIGVNTTGHPADH-----FHETVA--FTATADALATANFIVNALPLTPTTH  206 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSCCCCTT-----CSEEEE--GGGCHHHHHHCSEEEECCCCCGGGT
T ss_pred             cCCeEEEEC-cCHHHHHHHHHHHhC-CCEEEEECCCcchhHh-----Hhhccc--cCCHHHHHhhCCEEEEcCCCchHHH
Confidence            478999999 999999999999985 9999999987654321     112211  11233344578999988752     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       207 ~li~~~~l~~mk~gailIN~a  227 (324)
T 3evt_A          207 HLFSTELFQQTKQQPMLINIG  227 (324)
T ss_dssp             TCBSHHHHHTCCSCCEEEECS
T ss_pred             HhcCHHHHhcCCCCCEEEEcC
Confidence              1 57788899999999886

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.32  E-value=0.044  Score=46.00  Aligned_cols=34  Identities=24%  Similarity=0.310  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEec
Confidence            5789999999999999988877764 999999987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.32  E-value=0.055  Score=45.84  Aligned_cols=38  Identities=29%  Similarity=0.415  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~   83 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKE-GANIAIAYLDEEG   83 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCchH
Confidence            5789999999999999988877764 9999999987653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.32  E-value=0.034  Score=46.55  Aligned_cols=73  Identities=18%  Similarity=0.323  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCE-EeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++.+ +++..+.+    ++.+... ++..+-.+...          ...
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASM-GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999987776664 999999998 44444433    3344332 22222112111          113


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       107 ~id~li~nAg  116 (271)
T 4iin_A          107 GLSYLVNNAG  116 (271)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.31  E-value=0.13  Score=41.79  Aligned_cols=96  Identities=23%  Similarity=0.267  Sum_probs=61.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhh----HHHHHHcCCCEEeeCCCCc---ccccCCCc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAK----LDLLRSLGADLAIDYTKEN---IEDLPEKF  215 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~----~~~~~~~g~~~~~~~~~~~---~~~~~~~~  215 (310)
                      ....++++++||-+| +|. |..+..+++... +.+++.++.+++.    .+.+++...-.++..+-..   +......+
T Consensus        71 ~~~~~~~~~~vLDlG-~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~  148 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLG-AAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMV  148 (233)
T ss_dssp             SCCCCCTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCE
T ss_pred             heecCCCCCEEEEEc-ccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcE
Confidence            345678999999998 565 888888988741 3689999988653    3333332211222222222   11224579


Q ss_pred             cEEEeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       216 dvvi~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      |+|+.....       +..+.+.|+|+|+++..
T Consensus       149 D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~  181 (233)
T 2ipx_A          149 DVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS  181 (233)
T ss_dssp             EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence            999876542       24577899999999874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=95.29  E-value=0.039  Score=45.20  Aligned_cols=96  Identities=18%  Similarity=0.188  Sum_probs=64.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCc-cccc----
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN-IEDL----  211 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~~----  211 (310)
                      .....++++||-+| +| .|..+..+++... +.+++.++.+++..+.+++    .|..   .+...+... ....    
T Consensus        55 l~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           55 LTKISGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHHTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCS
T ss_pred             HHHhhCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhc
Confidence            34556789999999 55 6999999998742 4689999999998777754    3432   122221111 1111    


Q ss_pred             -----------C-CCccEEEeCCCC------hHHHHhhcccCCEEEEEe
Q 021628          212 -----------P-EKFDVVFDAVGQ------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       212 -----------~-~~~dvvi~~~g~------~~~~~~~l~~~G~~v~~g  242 (310)
                                 . ..+|+|+.....      ++.+.+.|+++|+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                       1 579999877541      377889999999998754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.29  E-value=0.017  Score=48.51  Aligned_cols=90  Identities=18%  Similarity=0.198  Sum_probs=57.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhc--CCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCCC----
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~--g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g~----  224 (310)
                      +|+|+|++|.+|...+..+.. .  |.+|+++++++++.+.+...+...+ .+..+ +.+....+++|+||++++.    
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMK-TVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTT-TSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHh-hCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            489999999999998887765 4  7899999998877665544444322 12222 1223334689999999762    


Q ss_pred             ----hHHHHhhccc--CCEEEEEeC
Q 021628          225 ----CDKALKAVKE--GGRVVSIIG  243 (310)
Q Consensus       225 ----~~~~~~~l~~--~G~~v~~g~  243 (310)
                          ....++.+..  -++++.++.
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECC
Confidence                2344444433  358887764

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=95.29  E-value=0.023  Score=46.99  Aligned_cols=96  Identities=19%  Similarity=0.221  Sum_probs=64.0

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCc-cccc--CCC
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN-IEDL--PEK  214 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~~--~~~  214 (310)
                      ....++.+||-+| +| .|..+..+++.+. +.+++.++.+++..+.+++    .|..   .+...+... ....  ...
T Consensus        59 ~~~~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~  136 (248)
T 3tfw_A           59 VRLTQAKRILEIG-TL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPA  136 (248)
T ss_dssp             HHHHTCSEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCC
T ss_pred             HhhcCCCEEEEec-CC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCC
Confidence            3456789999998 44 4888999998753 5689999999998877754    3432   222222111 1112  237


Q ss_pred             ccEEEeCCC--C----hHHHHhhcccCCEEEEEeC
Q 021628          215 FDVVFDAVG--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       215 ~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+|+-...  .    ++.+.+.|+|||.++.-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            999984432  1    4778899999999987643

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.28  E-value=0.14  Score=43.25  Aligned_cols=95  Identities=29%  Similarity=0.294  Sum_probs=62.8

Q ss_pred             ccchHHHHHHHHHhc-ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccc
Q 021628          132 LPLATETAYEGLERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIED  210 (310)
Q Consensus       132 ~~~~~~ta~~al~~~-~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  210 (310)
                      .||....+...++.. -.-.|.+++|.|..+.+|..+++++... |+.|+++.+....+++                 .+
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~~~~T~~l~l-----------------~~  206 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-NATVTIVHSGTSTEDM-----------------ID  206 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTSCHHHH-----------------HH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCCCCCchh-----------------hh
Confidence            354444444444433 3357999999996677999999999986 9998888764333320                 01


Q ss_pred             cCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          211 LPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       211 ~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      ..+.+|+||.++|... ---++++++..++.+|..
T Consensus       207 ~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          207 YLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCE
T ss_pred             hhccCCEEEECCCCCCCCcHHhcCCCcEEEEEecc
Confidence            1246789999988431 122457888888888753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.27  E-value=0.058  Score=47.06  Aligned_cols=93  Identities=22%  Similarity=0.195  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH--HHHHHcCCCEEeeCC-CCc---ccccCCCccEEEeCCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL--DLLRSLGADLAIDYT-KEN---IEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~--~~~~~~g~~~~~~~~-~~~---~~~~~~~~dvvi~~~g~  224 (310)
                      +.+|+|+|++|.+|...+..+... |.+|+++++++++.  +.+.+...-.++..+ -.+   +....+++|+||.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            467999999999999988877664 89999999987765  333332111222222 111   22224579999977642


Q ss_pred             h--------HHHHhhccc---CCEEEEEeCC
Q 021628          225 C--------DKALKAVKE---GGRVVSIIGS  244 (310)
Q Consensus       225 ~--------~~~~~~l~~---~G~~v~~g~~  244 (310)
                      .        ..+++.+..   -++|+.++..
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            1        334444333   2588887643

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.26  E-value=0.18  Score=42.71  Aligned_cols=93  Identities=14%  Similarity=0.157  Sum_probs=64.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHc-------CCC-EEeeCCCCcccccC-----
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL-------GAD-LAIDYTKENIEDLP-----  212 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~-------g~~-~~~~~~~~~~~~~~-----  212 (310)
                      ...++.+||=+| +| .|..+..+++.. .+.+++.++.+++..+.+++.       ... .++..+-++.....     
T Consensus        33 ~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  110 (299)
T 3g5t_A           33 HDGERKLLVDVG-CG-PGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVD  110 (299)
T ss_dssp             CCSCCSEEEEET-CT-TTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred             hcCCCCEEEEEC-CC-CCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccccccc
Confidence            346889999998 55 689999999752 478999999999988887553       222 22223322322222     


Q ss_pred             -CCccEEEeCCC----C----hHHHHhhcccCCEEEEE
Q 021628          213 -EKFDVVFDAVG----Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       213 -~~~dvvi~~~g----~----~~~~~~~l~~~G~~v~~  241 (310)
                       +.+|+|+....    .    +..+.+.|+|+|.++..
T Consensus       111 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~  148 (299)
T 3g5t_A          111 KQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW  148 (299)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence             57999987643    1    36788899999999874

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.25  E-value=0.21  Score=41.51  Aligned_cols=95  Identities=24%  Similarity=0.271  Sum_probs=63.8

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE--eeCCCCcc---cccCCCcc
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA--IDYTKENI---EDLPEKFD  216 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~--~~~~~~~~---~~~~~~~d  216 (310)
                      .+....++++++||=+| + +.|..+..+++.  +.+|+.++.+++.++.+++.-....  .+..+.+.   ......+|
T Consensus        37 il~~l~l~~g~~VLDlG-c-GtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD  112 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIG-A-STRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFD  112 (261)
T ss_dssp             HHHTTTCCTTCEEEEEC-T-TCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCS
T ss_pred             HHHhcCCCCcCEEEEEe-C-cchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCcc
Confidence            34566788999999998 4 468888888885  7899999999999998865332111  11111111   12245799


Q ss_pred             EEEeCCC--C---------hHHHHhhcccCCEEEEE
Q 021628          217 VVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       217 vvi~~~g--~---------~~~~~~~l~~~G~~v~~  241 (310)
                      +|+.+..  +         +....+.+ |+|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            9987532  1         24556678 99999754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.23  E-value=0.061  Score=43.96  Aligned_cols=41  Identities=17%  Similarity=0.310  Sum_probs=33.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCC-------cEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-------SKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~-------~vi~~~~~~~~~~~~  192 (310)
                      +.+++|+|++|.+|...+..+... |.       +|+++++++++.+.+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~~~~~~~   49 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKI   49 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCHHHHHHH
Confidence            568999999999999987766664 88       899999988876655

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.23  E-value=0.023  Score=47.78  Aligned_cols=86  Identities=21%  Similarity=0.364  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--CE-EeeCCCCcccccC-CCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--DL-AIDYTKENIEDLP-EKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~~-~~~~~~~~~~~~~-~~~dvvi~~~g~  224 (310)
                      .+.+++|+| +|++|.+++..+... |.+|++..++.++.+.+ ++++.  .. ..+     ..+.. ..+|++|++++.
T Consensus       118 ~~~~vlvlG-aGg~g~a~a~~L~~~-G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~-----~~~~~~~~~DivIn~t~~  190 (272)
T 1p77_A          118 PNQHVLILG-AGGATKGVLLPLLQA-QQNIVLANRTFSKTKELAERFQPYGNIQAVS-----MDSIPLQTYDLVINATSA  190 (272)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGSCEEEEE-----GGGCCCSCCSEEEECCCC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHccccCCeEEee-----HHHhccCCCCEEEECCCC
Confidence            578999999 699999988777775 78999999998887665 44432  11 121     12222 479999999874


Q ss_pred             hHH------HHhhcccCCEEEEEe
Q 021628          225 CDK------ALKAVKEGGRVVSII  242 (310)
Q Consensus       225 ~~~------~~~~l~~~G~~v~~g  242 (310)
                      ...      ....+.++..++.+.
T Consensus       191 ~~~~~~~~i~~~~l~~~~~v~D~~  214 (272)
T 1p77_A          191 GLSGGTASVDAEILKLGSAFYDMQ  214 (272)
T ss_dssp             -------CCCHHHHHHCSCEEESC
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEee
Confidence            211      113345555555554

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.23  E-value=0.046  Score=45.95  Aligned_cols=95  Identities=22%  Similarity=0.175  Sum_probs=63.2

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      .+||+.......++... --.|.+++|.|....+|.-+++++... |+.|+++.+..+.+.                   
T Consensus       138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~hs~t~~L~-------------------  197 (288)
T 1b0a_A          138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFTKNLR-------------------  197 (288)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSCSCHH-------------------
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-CCeEEEEeCCchhHH-------------------
Confidence            34555444444444433 357899999996657899999999986 999998865443332                   


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..+.+|+||.++|..+ -.-++++++..++.+|...
T Consensus       198 ~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          198 HHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEE
T ss_pred             HHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCc
Confidence            22345789999988542 1124568888888887543

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.23  E-value=0.022  Score=46.67  Aligned_cols=93  Identities=17%  Similarity=0.222  Sum_probs=62.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC----CC-EEeeCCCCcc--cccCCCccEE-
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----AD-LAIDYTKENI--EDLPEKFDVV-  218 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g----~~-~~~~~~~~~~--~~~~~~~dvv-  218 (310)
                      ...+|.+||-+| +| .|..+..+++. .+.+++.++.+++-++.+++..    .. .++..+..+.  ......||.| 
T Consensus        57 ~~~~G~rVLdiG-~G-~G~~~~~~~~~-~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           57 ASSKGGRVLEVG-FG-MAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             HTTTCEEEEEEC-CT-TSHHHHHHTTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred             hccCCCeEEEEC-CC-ccHHHHHHHHh-CCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence            346899999999 55 68888888887 3678999999999888886543    11 1222221111  1123468887 


Q ss_pred             EeCCC------C-------hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG------Q-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g------~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+..      .       +.++.+.|+|||+|+.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            45542      1       256788999999998763

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.22  E-value=0.037  Score=46.14  Aligned_cols=73  Identities=29%  Similarity=0.336  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCE-EeeCCCCcccc---c-------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADL-AIDYTKENIED---L-------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~-~~~~~~~~~~~---~-------~~  213 (310)
                      .+.+|+|+|++|.+|...+..+... |++|+++++ ++++.+.+    ++.+... .+..+-.+...   .       ..
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~-G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999988877774 999999998 76665443    2334432 22222111111   1       13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        99 ~~d~vi~~Ag  108 (274)
T 1ja9_A           99 GLDFVMSNSG  108 (274)
T ss_dssp             CEEEEECCCC
T ss_pred             CCCEEEECCC
Confidence            7899999876

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.20  E-value=0.043  Score=45.87  Aligned_cols=93  Identities=17%  Similarity=0.282  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~~----------~~  213 (310)
                      .+++++|+|+++++|.+.+..+... |++|++..+ ++++.+.+    ++.+.... +..+-.+....          ..
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASD-GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHH-TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999987766664 999988754 55554443    23443322 22221111111          13


Q ss_pred             CccEEEeCCCC-------------h---------------HHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVGQ-------------C---------------DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g~-------------~---------------~~~~~~l~~~G~~v~~g~  243 (310)
                      ++|++|+++|.             +               +.++..++++|+++.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            78999999871             0               234445667899998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.19  E-value=0.0088  Score=48.47  Aligned_cols=90  Identities=19%  Similarity=0.243  Sum_probs=57.5

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCCCh---
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQC---  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g~~---  225 (310)
                      .+|+|+|++|.+|...+..+... |.+|+++++++++...+. -+. .++..+-.+   +....+++|+||+++|..   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNR-GFEVTAVVRHPEKIKIEN-EHL-KVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCGGGCCCCC-TTE-EEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCcccchhcc-Cce-EEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            58999999999999998888875 899999999877653221 111 122221111   222235799999998721   


Q ss_pred             -----------HHHHhhcccC--CEEEEEeCC
Q 021628          226 -----------DKALKAVKEG--GRVVSIIGS  244 (310)
Q Consensus       226 -----------~~~~~~l~~~--G~~v~~g~~  244 (310)
                                 ...++.+...  ++++.++..
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                       3344444443  488887643

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=95.17  E-value=0.034  Score=46.06  Aligned_cols=73  Identities=19%  Similarity=0.282  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCccccc---------CCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIEDL---------PEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~---------~~~~  215 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+.    +.+... .+..+-.+....         ..++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            4789999999999999988877774 999999999888765552    234322 222211111110         1478


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++|+++|
T Consensus        85 d~lv~nAg   92 (252)
T 3h7a_A           85 EVTIFNVG   92 (252)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCC
Confidence            99999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.16  E-value=0.041  Score=45.08  Aligned_cols=73  Identities=23%  Similarity=0.421  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH----HHcCCCE-EeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGADL-AIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~----~~~g~~~-~~~~~~~~~~~~----------~~  213 (310)
                      .+.+++|+|++|.+|...+..+... |++|+++ .+++++.+.+    ++.+... .+..+-.+....          ..
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~-G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNM-GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4679999999999999988877774 9999988 5566554433    2334332 222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        83 ~~d~vi~~Ag   92 (247)
T 2hq1_A           83 RIDILVNNAG   92 (247)
T ss_dssp             CCCEEEECC-
T ss_pred             CCCEEEECCC
Confidence            7899999876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.14  E-value=0.019  Score=48.34  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=58.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhc--CCcEEEEecChhhHHHHHHcCCCEEe-eCCC-CcccccCCCccEEEeCCCC----
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVF--GASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~--g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~~dvvi~~~g~----  224 (310)
                      +|+|+|++|.+|...+..+.. .  |.+|+++++++++.+.+...+...+. +..+ +.+....+++|+||++++.    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLK-KVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTT-TSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHH-hCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            689999999999998887665 4  78999999988776655544443221 2222 1223334589999999862    


Q ss_pred             ------hHHHHhhcccC--CEEEEEeC
Q 021628          225 ------CDKALKAVKEG--GRVVSIIG  243 (310)
Q Consensus       225 ------~~~~~~~l~~~--G~~v~~g~  243 (310)
                            ....++.+...  ++++.++.
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence                  12344444333  48887764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.14  E-value=0.038  Score=46.80  Aligned_cols=72  Identities=24%  Similarity=0.214  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhH--HHHHHcCCCEEe-eCCC-CcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKL--DLLRSLGADLAI-DYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~--~~~~~~g~~~~~-~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      ..+|+|+|++|.+|...+..+... | .+|+++++++++.  +.+...+...+. +..+ +.+....+++|+||.+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH-CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhc-CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            468999999999999988877664 7 8999999987664  233344543321 2222 112223457999999986

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.12  E-value=0.04  Score=47.43  Aligned_cols=36  Identities=25%  Similarity=0.395  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      -.|++++|+|+++++|.+.+..+... |++|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~-G~~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAE-GARVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCc
Confidence            45789999999999999988776664 9999999876

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.12  E-value=0.039  Score=45.60  Aligned_cols=43  Identities=23%  Similarity=0.320  Sum_probs=36.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.+++++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   52 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARY-GATVILLGRNEEKLRQV   52 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            35789999999999999988776664 99999999998876655

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.11  E-value=0.077  Score=44.41  Aligned_cols=95  Identities=24%  Similarity=0.275  Sum_probs=61.3

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ..||....+...++... --.|.+++|.|....+|..+++++...+ ++.|+++.+..+.                   +
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~-------------------L  197 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRD-------------------L  197 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSC-------------------H
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhH-------------------H
Confidence            34554444444444443 3578999999955568999999888732 6888877554322                   2


Q ss_pred             cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                      .+..+.+|+||.++|..+ -.-++++++..++.+|..
T Consensus       198 ~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          198 PALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             HHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEE
T ss_pred             HHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCC
Confidence            233457889999988532 122456888888888754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.04  E-value=0.039  Score=46.06  Aligned_cols=46  Identities=24%  Similarity=0.318  Sum_probs=35.7

Q ss_pred             CCCEEEEEcC--CcchHHHHHHHHHhhcCCcEEEEecChhh-HHHH-HHcC
Q 021628          150 AGKSILVLGG--AGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLL-RSLG  196 (310)
Q Consensus       150 ~g~~vlI~g~--~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~-~~~g  196 (310)
                      .+.+++|+|+  ++++|.+.+..+... |++|+++++++++ ++.+ ++++
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~   55 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLP   55 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSS
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHC-CCEEEEEecChHHHHHHHHHhcC
Confidence            4689999998  899999988877764 9999999998765 3444 3444

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.03  E-value=0.053  Score=46.57  Aligned_cols=36  Identities=28%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      -.|+++||+|+++++|.+.+..+... |++|++++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~-G~~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQD-GADIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCeEEEEecc
Confidence            35789999999999999988877664 9999998765

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.02  E-value=0.041  Score=47.67  Aligned_cols=83  Identities=23%  Similarity=0.298  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++ +...++|...  .    ++.+....+|+|+.+++.     
T Consensus       145 ~g~~vgIIG-~G~iG~~vA~~l~~~-G~~V~~~d~~~~~-~~~~~~g~~~--~----~l~e~l~~aDiVil~vp~~~~t~  215 (333)
T 2d0i_A          145 YGKKVGILG-MGAIGKAIARRLIPF-GVKLYYWSRHRKV-NVEKELKARY--M----DIDELLEKSDIVILALPLTRDTY  215 (333)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCH-HHHHHHTEEE--C----CHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHC-CCEEEEECCCcch-hhhhhcCcee--c----CHHHHHhhCCEEEEcCCCChHHH
Confidence            577999999 999999999999985 9999999988776 4455555321  1    222333467888887752     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++ .++.++
T Consensus       216 ~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          216 HIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             TSBCHHHHHHTBTC-EEEECS
T ss_pred             HHhCHHHHhhCCCC-EEEECC
Confidence              1 3456777777 666554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.00  E-value=0.038  Score=45.81  Aligned_cols=39  Identities=23%  Similarity=0.353  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADA-GDKVAITYRSGEPP   58 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHhh
Confidence            4689999999999999988877764 99999999876654

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.00  E-value=0.065  Score=42.71  Aligned_cols=94  Identities=14%  Similarity=0.046  Sum_probs=60.3

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-CC----------------C-EEeeCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA----------------D-LAIDYTK  205 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-g~----------------~-~~~~~~~  205 (310)
                      ....+.++.+||-.| +| .|..+..+++.  |.+|+.++.+++.++.+++. ..                . .++..+-
T Consensus        16 ~~l~~~~~~~vLD~G-CG-~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           16 SSLNVVPGARVLVPL-CG-KSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHCCCTTCEEEETT-TC-CSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HhcccCCCCEEEEeC-CC-CcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            334567889999998 54 47778888875  88999999999998888542 21                0 1111111


Q ss_pred             CcccccC-CCccEEEeCCC--C---------hHHHHhhcccCCEEEEE
Q 021628          206 ENIEDLP-EKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       206 ~~~~~~~-~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~  241 (310)
                      .+..... +.+|+|++...  .         ++++.+.|+|+|+++.+
T Consensus        92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1111111 46999997432  1         25677899999994433

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.00  E-value=0.057  Score=44.51  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+.+++|+|++|++|.+.+..+... |++|++++++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~-G~~V~~~~r~~~   42 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEA-GAKVTGFDQAFT   42 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCchh
Confidence            4679999999999999988877774 999999998765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.99  E-value=0.076  Score=45.67  Aligned_cols=85  Identities=19%  Similarity=0.262  Sum_probs=59.1

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---H-
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D-  226 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~-  226 (310)
                      ..+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|.....     +..+....+|+||.|++..   + 
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~~-----~~~e~~~~aDvVi~~vp~~~~~~~  103 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCEA-GYALQVWNRTPARAASLAALGATIHE-----QARAAARDADIVVSMLENGAVVQD  103 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTTTCEEES-----SHHHHHTTCSEEEECCSSHHHHHH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHCCCEeeC-----CHHHHHhcCCEEEEECCCHHHHHH
Confidence            35899999 899999877777764 89999999999999888776653221     2223335678888887742   2 


Q ss_pred             -----HHHhhcccCCEEEEEe
Q 021628          227 -----KALKAVKEGGRVVSII  242 (310)
Q Consensus       227 -----~~~~~l~~~G~~v~~g  242 (310)
                           .....+.++..++..+
T Consensus       104 v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A          104 VLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             HHTTTCHHHHCCTTCEEEECS
T ss_pred             HHcchhHHhhCCCCCEEEecC
Confidence                 2333566666666654

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=94.98  E-value=0.11  Score=41.41  Aligned_cols=95  Identities=20%  Similarity=0.191  Sum_probs=63.7

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC---EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD---LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~d  216 (310)
                      +....+++ +||-+| +| .|..+..+++. .+.+++.++.+++..+.+++.    +..   .+...+-.......+.+|
T Consensus        38 ~~~~~~~~-~vLdiG-~G-~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D  113 (219)
T 3dlc_A           38 NRFGITAG-TCIDIG-SG-PGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYAD  113 (219)
T ss_dssp             HHHCCCEE-EEEEET-CT-TSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEE
T ss_pred             HhcCCCCC-EEEEEC-CC-CCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccccc
Confidence            44455666 899888 44 48888888887 478999999999988777543    321   222222222222235799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     .    +..+.+.|+|+|+++...
T Consensus       114 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  148 (219)
T 3dlc_A          114 LIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG  148 (219)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence            9987543     1    367888999999998765

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=94.97  E-value=0.069  Score=44.31  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH----HHcCCC-EEeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL----RSLGAD-LAIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~----------~~  213 (310)
                      .|.+++|+|+++++|.+.+..+... |++|+++ .+++++.+..    ++.+.. ..+..+-.+....          .+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999988877664 9999988 4455544333    333432 2222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        86 ~id~lv~nAg   95 (259)
T 3edm_A           86 EIHGLVHVAG   95 (259)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999875

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.97  E-value=0.081  Score=46.35  Aligned_cols=48  Identities=25%  Similarity=0.300  Sum_probs=40.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD  198 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~  198 (310)
                      -.|.+|+|.| .|.+|..+++.+... |++|++.+++.++++.+ ++++++
T Consensus       171 L~GktV~V~G-~G~VG~~~A~~L~~~-GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEEC-chHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHcCCE
Confidence            4789999999 899999999999996 99999888898887754 556654

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=94.97  E-value=0.18  Score=39.13  Aligned_cols=91  Identities=19%  Similarity=0.134  Sum_probs=62.1

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCCC---
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVG---  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g---  223 (310)
                      ++++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++... -.+...+-.......+.+|+|+....   
T Consensus        44 ~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~  119 (195)
T 3cgg_A           44 APRGAKILDAG-CG-QGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMG  119 (195)
T ss_dssp             SCTTCEEEEET-CT-TTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred             ccCCCeEEEEC-CC-CCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence            56889999998 55 58888888875  7799999999998888865432 22333222222222357999987521   


Q ss_pred             C---------hHHHHhhcccCCEEEEEe
Q 021628          224 Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      .         +..+.+.|+++|+++..-
T Consensus       120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~  147 (195)
T 3cgg_A          120 FLAEDGREPALANIHRALGADGRAVIGF  147 (195)
T ss_dssp             GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            1         256778899999998753

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=94.96  E-value=0.059  Score=42.32  Aligned_cols=89  Identities=16%  Similarity=0.160  Sum_probs=57.0

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcC----------CcEEEEecChhhHHHHHHcCCCEEe-eCCCCcccc----
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFG----------ASKVAATSSTAKLDLLRSLGADLAI-DYTKENIED----  210 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g----------~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~----  210 (310)
                      ..++++++||-+| +|+ |..+..+++.. +          .+++.++.++.+.     +.....+ ..+-.....    
T Consensus        18 ~~~~~~~~vLDlG-cG~-G~~~~~la~~~-~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~   89 (196)
T 2nyu_A           18 QILRPGLRVLDCG-AAP-GAWSQVAVQKV-NAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRI   89 (196)
T ss_dssp             CCCCTTCEEEEET-CCS-CHHHHHHHHHT-TTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHH
T ss_pred             CCCCCCCEEEEeC-CCC-CHHHHHHHHHh-ccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHH
Confidence            3468899999999 777 99999999985 5          6788888887431     1111222 211111100    


Q ss_pred             ---c-CCCccEEEe-----CCCC---------------hHHHHhhcccCCEEEEEe
Q 021628          211 ---L-PEKFDVVFD-----AVGQ---------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       211 ---~-~~~~dvvi~-----~~g~---------------~~~~~~~l~~~G~~v~~g  242 (310)
                         . ...+|+|+.     +.+.               +..+.+.|+|+|+++...
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence               1 237999995     3331               245678999999998764

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.95  E-value=0.11  Score=43.76  Aligned_cols=65  Identities=23%  Similarity=0.319  Sum_probs=47.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      -+|.|+|.+|.+|...+..+... |.+|++.++++++.+.+.+.|.+.    .  +..+...++|+||.|+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~~g~~~----~--~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQGMGIPL----T--DGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHHHTTCCC----C--CSSGGGGTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHhcCCCc----C--CHHHHhcCCCEEEEcCC
Confidence            37999994499999877777664 889999999999888887776432    1  12223357888888876

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=94.94  E-value=0.16  Score=44.85  Aligned_cols=93  Identities=19%  Similarity=0.249  Sum_probs=63.9

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhh-cCCcEEEEecChhhHHHHHHc---------C----CC-EEeeCCCCcc----
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHV-FGASKVAATSSTAKLDLLRSL---------G----AD-LAIDYTKENI----  208 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~-~g~~vi~~~~~~~~~~~~~~~---------g----~~-~~~~~~~~~~----  208 (310)
                      ..++.+||=+| +| .|..+..+++.. .+.+++.++.+++.++.+++.         |    .. .++..+-.+.    
T Consensus        81 ~~~~~~VLDlG-cG-~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~  158 (383)
T 4fsd_A           81 SLEGATVLDLG-CG-TGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE  158 (383)
T ss_dssp             GGTTCEEEEES-CT-TSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred             CCCCCEEEEec-Cc-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence            67899999998 44 488888888874 256899999999988888653         3    12 2232322222    


Q ss_pred             --cccCCCccEEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          209 --EDLPEKFDVVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       209 --~~~~~~~dvvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                        ....+.+|+|+....     .    +.++.+.|+|+|+++...
T Consensus       159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  203 (383)
T 4fsd_A          159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD  203 (383)
T ss_dssp             SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence              122347999986542     1    378889999999998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=94.94  E-value=0.049  Score=45.39  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~   44 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDE-GSKVIDLSIHDPG   44 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEecCccc
Confidence            4689999999999999988877774 9999999987665

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=94.93  E-value=0.038  Score=46.44  Aligned_cols=47  Identities=34%  Similarity=0.478  Sum_probs=39.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA  197 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~  197 (310)
                      .|.+++|+|+++++|.+.++.+... |++|+++++++++.+.+ ++++.
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~-G~~Vi~~~r~~~~~~~~~~~~~~   76 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHAD-GLGVVIADLAAEKGKALADELGN   76 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCC
Confidence            5789999999999999988777664 99999999998887766 45554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.92  E-value=0.079  Score=47.23  Aligned_cols=79  Identities=18%  Similarity=0.166  Sum_probs=50.1

Q ss_pred             hccc-CCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChhhH----------------HHHHHcCCCEE-eeCCC
Q 021628          145 RSAF-SAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTAKL----------------DLLRSLGADLA-IDYTK  205 (310)
Q Consensus       145 ~~~~-~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~~~----------------~~~~~~g~~~~-~~~~~  205 (310)
                      ..++ +.++++||+|+++++|++.+..+.. . |++|+++.++.++.                +.+++.|.... +..+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~-GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGF-GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhC-CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3455 4678999999999999986665544 5 99999988754421                34455664432 22221


Q ss_pred             Cccc----------ccC-CCccEEEeCCCC
Q 021628          206 ENIE----------DLP-EKFDVVFDAVGQ  224 (310)
Q Consensus       206 ~~~~----------~~~-~~~dvvi~~~g~  224 (310)
                      .+..          +.- +++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            1111          113 578999998763

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=94.90  E-value=0.33  Score=39.27  Aligned_cols=89  Identities=19%  Similarity=0.220  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--hH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CD  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~  226 (310)
                      .|.+|||.| .|.+|...+..+... |++|++++.+.. .++.+.+.+.-..+.. ... .....++|+||-++++  .+
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~-GA~VtVvap~~~~~l~~l~~~~~i~~i~~-~~~-~~dL~~adLVIaAT~d~~~N  105 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQE-GAAITVVAPTVSAEINEWEAKGQLRVKRK-KVG-EEDLLNVFFIVVATNDQAVN  105 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGG-CCCEEEECSSCCHHHHHHHHTTSCEEECS-CCC-GGGSSSCSEEEECCCCTHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHcCCcEEEEC-CCC-HhHhCCCCEEEECCCCHHHH
Confidence            578999999 899999999988885 999999886432 3444433332122211 111 2234689999999885  34


Q ss_pred             HHHhhcccCCEEEEEe
Q 021628          227 KALKAVKEGGRVVSII  242 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g  242 (310)
                      ..+...+..|..+...
T Consensus       106 ~~I~~~ak~gi~VNvv  121 (223)
T 3dfz_A          106 KFVKQHIKNDQLVNMA  121 (223)
T ss_dssp             HHHHHHSCTTCEEEC-
T ss_pred             HHHHHHHhCCCEEEEe
Confidence            4444444477777654

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.89  E-value=0.035  Score=46.86  Aligned_cols=85  Identities=22%  Similarity=0.265  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      -.+.+++|+| +|+.|.+++..+... |+ +++++.|+.++.+.+. ++.   .....  ++.. . .+|+||+|++.  
T Consensus       120 ~~~k~vlvlG-aGGaaraia~~L~~~-G~~~v~v~nRt~~ka~~La~~~~---~~~~~--~l~~-l-~~DivInaTp~Gm  190 (282)
T 3fbt_A          120 IKNNICVVLG-SGGAARAVLQYLKDN-FAKDIYVVTRNPEKTSEIYGEFK---VISYD--ELSN-L-KGDVIINCTPKGM  190 (282)
T ss_dssp             CTTSEEEEEC-SSTTHHHHHHHHHHT-TCSEEEEEESCHHHHHHHCTTSE---EEEHH--HHTT-C-CCSEEEECSSTTS
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHhcC---cccHH--HHHh-c-cCCEEEECCccCc
Confidence            3588999999 799999988888875 87 8889999998876663 331   22221  1122 2 78999999752  


Q ss_pred             -h-----HHHHhhcccCCEEEEEe
Q 021628          225 -C-----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 -~-----~~~~~~l~~~G~~v~~g  242 (310)
                       .     .-....++++..++.+.
T Consensus       191 ~~~~~~~pi~~~~l~~~~~v~Dlv  214 (282)
T 3fbt_A          191 YPKEGESPVDKEVVAKFSSAVDLI  214 (282)
T ss_dssp             TTSTTCCSSCHHHHTTCSEEEESC
T ss_pred             cCCCccCCCCHHHcCCCCEEEEEe
Confidence             1     11345566776666664

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.87  E-value=0.058  Score=45.35  Aligned_cols=87  Identities=28%  Similarity=0.321  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCChH--
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCD--  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~~--  226 (310)
                      .+.+|+|+| +|.+|.+.+..+... |.++++..+++++.+.+ ++++.. +.+    +..+....+|+|+.|++...  
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~-g~~V~v~~r~~~~~~~l~~~~g~~-~~~----~~~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKE-GAKVFLWNRTKEKAIKLAQKFPLE-VVN----SPEEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSHHHHHHHTTTSCEE-ECS----CGGGTGGGCSEEEECSSTTSST
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHcCCe-eeh----hHHhhhcCCCEEEEeCCCCCCC
Confidence            467999999 899999988887775 88888889998887665 345531 111    22333457999999986311  


Q ss_pred             ---HH--HhhcccCCEEEEEeC
Q 021628          227 ---KA--LKAVKEGGRVVSIIG  243 (310)
Q Consensus       227 ---~~--~~~l~~~G~~v~~g~  243 (310)
                         ..  ...+.++..++.++.
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence               11  345677777766654

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=94.87  E-value=0.11  Score=42.06  Aligned_cols=96  Identities=26%  Similarity=0.237  Sum_probs=62.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc---cccCCCc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLAIDYTKENI---EDLPEKF  215 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~---~~~~~~~  215 (310)
                      ....++++++||-+| +|. |..+..+++..+ +.+++.++.+++..+.+.+    ..--.++..+....   ......+
T Consensus        67 ~~~~~~~~~~vLDlG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~  144 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLG-IAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKV  144 (227)
T ss_dssp             CCCCCCTTCEEEEET-TTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HhcCCCCCCEEEEEe-ccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCc
Confidence            344578999999998 555 888888888741 2688999999876655532    21112222222221   1123479


Q ss_pred             cEEEeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       216 dvvi~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      |+|+.....       +..+.+.|+|+|+++..
T Consensus       145 D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          145 DVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            999866542       35677899999999876

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=94.86  E-value=0.051  Score=44.39  Aligned_cols=41  Identities=15%  Similarity=0.218  Sum_probs=33.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~  192 (310)
                      +++++|+|++|.+|...++.+... |++|+++ .+++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~-G~~v~~~~~r~~~~~~~~   42 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED-GFALAIHYGQNREKAEEV   42 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESSCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            368999999999999988877774 9999988 7787766544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.83  E-value=0.057  Score=45.89  Aligned_cols=72  Identities=24%  Similarity=0.431  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC-----hhhHHHHHH---cCCCEE-eeCCC-CcccccCCCccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-----TAKLDLLRS---LGADLA-IDYTK-ENIEDLPEKFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~-----~~~~~~~~~---~g~~~~-~~~~~-~~~~~~~~~~dvvi~  220 (310)
                      ..+|+|+|++|.+|...+..+... |.+|++++++     +++.+.+++   .+...+ .+..+ +++....+++|+||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            357999999999999988877774 8999999987     444444432   233222 12222 122223458999999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      +++
T Consensus        83 ~a~   85 (313)
T 1qyd_A           83 ALA   85 (313)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            876

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=94.82  E-value=0.055  Score=46.69  Aligned_cols=34  Identities=24%  Similarity=0.368  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      +.+++|+|++|++|.+.+..+... |++|++++++
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~-G~~V~~~~r~   38 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGA-GHRVYASMRD   38 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-CCEEEEecCc
Confidence            578999999999999988877774 9999988765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=94.82  E-value=0.084  Score=45.37  Aligned_cols=73  Identities=26%  Similarity=0.382  Sum_probs=47.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---------ChhhHHHH----HHcCCCEEeeCCCCc-ccc-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---------STAKLDLL----RSLGADLAIDYTKEN-IED-----  210 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---------~~~~~~~~----~~~g~~~~~~~~~~~-~~~-----  210 (310)
                      .|.+++|+|+++++|.+.+..+... |++|++.++         +.++.+.+    ++.+.....+..+.. ...     
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~-Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            4789999999999999988877764 999998743         44544333    233433344433321 111     


Q ss_pred             --cCCCccEEEeCCC
Q 021628          211 --LPEKFDVVFDAVG  223 (310)
Q Consensus       211 --~~~~~dvvi~~~g  223 (310)
                        ...++|++|+++|
T Consensus        87 ~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence              1247899999987

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=94.80  E-value=0.05  Score=46.62  Aligned_cols=72  Identities=18%  Similarity=0.239  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecC---hhhHHHH-HHc----CCC-EEeeCCCC-cccccCCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSS---TAKLDLL-RSL----GAD-LAIDYTKE-NIEDLPEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~---~~~~~~~-~~~----g~~-~~~~~~~~-~~~~~~~~~dvv  218 (310)
                      .+.+++|+| +|+.|.+++..+... |+ +++++.|+   .++.+.+ +++    +.. ...+..+. ...+....+|+|
T Consensus       147 ~gk~~lVlG-AGGaaraia~~L~~~-G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          147 RGKTMVLLG-AGGAATAIGAQAAIE-GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHc-CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            578999999 799999988877775 87 78888999   5555544 333    221 12222211 001123468999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+|++
T Consensus       225 INaTp  229 (312)
T 3t4e_A          225 TNGTK  229 (312)
T ss_dssp             EECSS
T ss_pred             EECCc
Confidence            99976

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=94.80  E-value=0.076  Score=45.00  Aligned_cols=83  Identities=17%  Similarity=0.268  Sum_probs=57.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKAL  229 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~~  229 (310)
                      +|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|....     .+..+...++|+||.|++.   .+..+
T Consensus         7 ~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAETA-----STAKAIAEQCDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-----SSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEEC-chHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHCCCeec-----CCHHHHHhCCCEEEEECCCHHHHHHHH
Confidence            699999 899999877777664 8899999999998888877664211     1122223468899999873   23333


Q ss_pred             -------hhcccCCEEEEEe
Q 021628          230 -------KAVKEGGRVVSII  242 (310)
Q Consensus       230 -------~~l~~~G~~v~~g  242 (310)
                             ..+.++..++.++
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECS
T ss_pred             hCcchHhhcCCCCCEEEECC
Confidence                   4566677676654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=94.79  E-value=0.046  Score=45.69  Aligned_cols=74  Identities=26%  Similarity=0.348  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHHH----HcCCCE-EeeCCCCccccc----------C
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLLR----SLGADL-AIDYTKENIEDL----------P  212 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~----------~  212 (310)
                      ..+.+++|+|+++++|.+.+..+... |++|+++ .+++++.+.+.    +.+... .+..+-.+..+.          .
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQ-GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45789999999999999988877764 9999877 56766655442    334322 222221111111          1


Q ss_pred             CCccEEEeCCC
Q 021628          213 EKFDVVFDAVG  223 (310)
Q Consensus       213 ~~~dvvi~~~g  223 (310)
                      +++|++|+++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36899999876

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.78  E-value=0.021  Score=48.70  Aligned_cols=68  Identities=25%  Similarity=0.355  Sum_probs=45.1

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+|+|+|++|.+|...+..+... |.+|+++++++.+.+ ++  +...+ .+...+.+....+++|+||++++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKND-GNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence            58999999999999988888774 999999999855554 43  32222 12221222333458999999976

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.78  E-value=0.047  Score=45.21  Aligned_cols=73  Identities=23%  Similarity=0.285  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH-HcCCCE-EeeCCCCccccc----------CCCccE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR-SLGADL-AIDYTKENIEDL----------PEKFDV  217 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~----------~~~~dv  217 (310)
                      |++++|+|+++++|.+.+..+...+ +..|+.+.+++++++.+. +++... .+..+-.+....          ..++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5789999999999998776554432 468888899988877663 444332 222211111111          137899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        82 lvnnAg   87 (254)
T 3kzv_A           82 LVANAG   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEECCc
Confidence            998876

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.78  E-value=0.025  Score=47.95  Aligned_cols=81  Identities=28%  Similarity=0.408  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+.     . ..    ..++.+....+|+|+.+.+.     
T Consensus       121 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~~-----~-~~----~~~l~ell~~aDiV~l~~P~t~~t~  188 (290)
T 3gvx_A          121 YGKALGILG-YGGIGRRVAHLAKAF-GMRVIAYTRSSVDQNV-----D-VI----SESPADLFRQSDFVLIAIPLTDKTR  188 (290)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSCCCTTC-----S-EE----CSSHHHHHHHCSEEEECCCCCTTTT
T ss_pred             ecchheeec-cCchhHHHHHHHHhh-CcEEEEEecccccccc-----c-cc----cCChHHHhhccCeEEEEeeccccch
Confidence            478999999 999999999999995 9999999987654321     1 10    11233334578899888762     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...++.|+++..++.++
T Consensus       189 ~li~~~~l~~mk~gailIN~a  209 (290)
T 3gvx_A          189 GMVNSRLLANARKNLTIVNVA  209 (290)
T ss_dssp             TCBSHHHHTTCCTTCEEEECS
T ss_pred             hhhhHHHHhhhhcCceEEEee
Confidence              1 56788899999998886

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.77  E-value=0.044  Score=44.81  Aligned_cols=41  Identities=15%  Similarity=0.292  Sum_probs=33.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~  192 (310)
                      |.+++|+|++|.+|...++.+... |++|+++ .+++++.+.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~-G~~v~~~~~r~~~~~~~~   42 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEV   42 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHH
Confidence            468999999999999988877774 9999885 6777765544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=94.74  E-value=0.044  Score=46.21  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|++|.+.+..+... |++|+++++++++++.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4789999999999999988877774 99999999998877654

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=94.74  E-value=0.19  Score=40.83  Aligned_cols=91  Identities=18%  Similarity=0.231  Sum_probs=63.5

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC--CC-EEeeCCCCcccccCCCccEEEeCCC-
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--AD-LAIDYTKENIEDLPEKFDVVFDAVG-  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g--~~-~~~~~~~~~~~~~~~~~dvvi~~~g-  223 (310)
                      ++++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++..  .. .++..+-.........+|+|+.... 
T Consensus        51 ~~~~~~vLDiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l  126 (242)
T 3l8d_A           51 VKKEAEVLDVG-CG-DGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSL  126 (242)
T ss_dssp             SCTTCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred             cCCCCeEEEEc-CC-CCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence            46889999998 44 57788888875  789999999999998887653  11 1222222222222457999986532 


Q ss_pred             ----C----hHHHHhhcccCCEEEEEe
Q 021628          224 ----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ----~----~~~~~~~l~~~G~~v~~g  242 (310)
                          .    +..+.+.|+|+|+++...
T Consensus       127 ~~~~~~~~~l~~~~~~L~pgG~l~i~~  153 (242)
T 3l8d_A          127 EWTEEPLRALNEIKRVLKSDGYACIAI  153 (242)
T ss_dssp             TSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence                1    367888999999998775

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=94.73  E-value=0.063  Score=44.42  Aligned_cols=71  Identities=18%  Similarity=0.240  Sum_probs=45.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE-EeeCCCCcccc---c------CCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL-AIDYTKENIED---L------PEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~---~------~~~~dvvi  219 (310)
                      .+++++|+|+++++|.+.+..+... |++|++++++.++.  .++++... .+..+-.+..+   .      ..++|++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDA-GAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCHHH--HHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCchHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4689999999999999987766664 99999999855433  34455332 22221111111   1      13789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9987

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.69  E-value=0.24  Score=44.78  Aligned_cols=97  Identities=19%  Similarity=0.242  Sum_probs=63.2

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccc-cC-CC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIED-LP-EK  214 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~-~~-~~  214 (310)
                      ....+++|++||=.| +|+ |..+.++++.+.+ .++++++.++++++.+++    +|...  ++..+...... .. ..
T Consensus       253 ~~l~~~~g~~VLDlg-aG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~  330 (450)
T 2yxl_A          253 IVLDPKPGETVVDLA-AAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEV  330 (450)
T ss_dssp             HHHCCCTTCEEEESS-CTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSC
T ss_pred             HhcCCCCcCEEEEeC-CCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCC
Confidence            345678999999887 454 7777788886534 689999999999877743    46432  22222222211 22 46


Q ss_pred             ccEEEe---CCC--C--------------------------hHHHHhhcccCCEEEEEe
Q 021628          215 FDVVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       215 ~dvvi~---~~g--~--------------------------~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+|+.   |+|  .                          +..+++.|+|||+++...
T Consensus       331 fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          331 ADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             EEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999984   333  1                          245677899999998654

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=94.68  E-value=0.17  Score=43.07  Aligned_cols=104  Identities=22%  Similarity=0.250  Sum_probs=66.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC------  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~------  225 (310)
                      ++|-++| .|.+|...+.-+... |.+|++.++++++.+.+.+.|+...     .+..+.....|+||-|.++.      
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~G~~~~-----~s~~e~~~~~dvvi~~l~~~~~~~~v   78 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEA-GYELVVWNRTASKAEPLTKLGATVV-----ENAIDAITPGGIVFSVLADDAAVEEL   78 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEC-------CTTTTTTCEEC-----SSGGGGCCTTCEEEECCSSHHHHHHH
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCeEe-----CCHHHHHhcCCceeeeccchhhHHHH
Confidence            4799999 999998866554443 8999999999999888877775322     23344556889999998732      


Q ss_pred             --HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          226 --DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       226 --~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        ...+..+.++..++..+.            ...+..+++-+.+.+..+.
T Consensus        79 ~~~~~~~~~~~~~iiid~sT------------~~p~~~~~~~~~~~~~g~~  117 (297)
T 4gbj_A           79 FSMELVEKLGKDGVHVSMST------------ISPETSRQLAQVHEWYGAH  117 (297)
T ss_dssp             SCHHHHHHHCTTCEEEECSC------------CCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHhhcCCCeEEEECCC------------CChHHHHHHHHHHHhcCCc
Confidence              346677888888887752            3455566666666655544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=94.67  E-value=0.066  Score=44.01  Aligned_cols=73  Identities=22%  Similarity=0.330  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~~----------~~  213 (310)
                      .+++++|+|+++++|.+.+..+... |++|+++++ ++++.+.+    ++.+.+.. +..+-.+..+.          ..
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEE-GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999988877664 999998877 55554443    33443322 22221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (246)
T 3osu_A           82 SLDVLVNNAG   91 (246)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999887

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.66  E-value=0.4  Score=41.18  Aligned_cols=108  Identities=15%  Similarity=0.156  Sum_probs=65.2

Q ss_pred             EEEEEcCCcchHHHH-HHHHHhhcCCcEEE-EecChhhHHHH-HHcCCCEEeeCCCCccccc--CCCccEEEeCCCC---
Q 021628          153 SILVLGGAGGVGTMV-IQLAKHVFGASKVA-ATSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ---  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a-~~la~~~~g~~vi~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~dvvi~~~g~---  224 (310)
                      +|.|+| +|.+|... +..++. .+.+++. .++++++.+.+ +++|...+++    +..+.  ...+|+|+.+++.   
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~~----~~~~~l~~~~~D~V~i~tp~~~h   75 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSVT----SVEELVGDPDVDAVYVSTTNELH   75 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCBS----CHHHHHTCTTCCEEEECSCGGGH
T ss_pred             eEEEEc-ccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcccC----CHHHHhcCCCCCEEEEeCChhHh
Confidence            588999 89999875 544444 3788774 56688777655 5677532221    22222  1369999999873   


Q ss_pred             hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          225 CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      .+.+..++.. |+-+.+..+.         ....+..+++.++.++......
T Consensus        76 ~~~~~~al~~-Gk~v~~ekP~---------~~~~~~~~~l~~~a~~~g~~~~  117 (332)
T 2glx_A           76 REQTLAAIRA-GKHVLCEKPL---------AMTLEDAREMVVAAREAGVVLG  117 (332)
T ss_dssp             HHHHHHHHHT-TCEEEECSSS---------CSSHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHHHHHHHC-CCeEEEeCCC---------cCCHHHHHHHHHHHHHcCCEEE
Confidence            3556666665 5545553211         1234566777777776555543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.65  E-value=0.077  Score=44.80  Aligned_cols=84  Identities=21%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKA  228 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~  228 (310)
                      .+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|....     .+..+...++|+||.|++.   .+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVESCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHhcCCEEEEEcCCHHHHHHH
Confidence            4789999 899999877777764 8999999999999888877664321     1122223356788877763   1222


Q ss_pred             H-------hhcccCCEEEEEe
Q 021628          229 L-------KAVKEGGRVVSII  242 (310)
Q Consensus       229 ~-------~~l~~~G~~v~~g  242 (310)
                      +       ..++++..++..+
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECS
T ss_pred             HcCcchHhhcCCCCCEEEeCC
Confidence            2       4455666565553

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=94.65  E-value=0.17  Score=42.99  Aligned_cols=87  Identities=16%  Similarity=0.229  Sum_probs=55.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-------eCCCCcccccC---CCccEEEeCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-------DYTKENIEDLP---EKFDVVFDAV  222 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~---~~~dvvi~~~  222 (310)
                      +|.|+| +|.+|.+.+..+... |.+|+++++++++.+.+++.|.....       .....+..+..   .++|+||-|+
T Consensus         5 ~i~iiG-~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v   82 (316)
T 2ew2_A            5 KIAIAG-AGAMGSRLGIMLHQG-GNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT   82 (316)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred             eEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence            689999 899998877766654 88999999999998888765632111       00000111222   3789999998


Q ss_pred             CC--h----HHHHhhcccCCEEEEE
Q 021628          223 GQ--C----DKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g~--~----~~~~~~l~~~G~~v~~  241 (310)
                      ..  .    ......++++..++++
T Consensus        83 ~~~~~~~v~~~l~~~l~~~~~iv~~  107 (316)
T 2ew2_A           83 KAQQLDAMFKAIQPMITEKTYVLCL  107 (316)
T ss_dssp             CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred             ccccHHHHHHHHHHhcCCCCEEEEe
Confidence            73  2    3333455566666665

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=94.63  E-value=0.089  Score=42.51  Aligned_cols=97  Identities=19%  Similarity=0.175  Sum_probs=64.6

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCC-C--EEeeCCCCcc-ccc---C
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGA-D--LAIDYTKENI-EDL---P  212 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~-~~~---~  212 (310)
                      .....++++||-+| +| .|..+..+++... +.+++.++.+++..+.+++    .|. +  .++..+..+. ...   .
T Consensus        64 l~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~  141 (229)
T 2avd_A           64 LARLIQAKKALDLG-TF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG  141 (229)
T ss_dssp             HHHHTTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhcCCCEEEEEc-CC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence            34456788999999 55 8999999998743 4689999999988877754    343 1  1222221111 111   1


Q ss_pred             --CCccEEEeCCC--C----hHHHHhhcccCCEEEEEeC
Q 021628          213 --EKFDVVFDAVG--Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       213 --~~~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g~  243 (310)
                        ..+|+|+....  .    ++.+.+.|+++|.++....
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence              57999886543  1    4788899999999987643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.63  E-value=0.082  Score=45.50  Aligned_cols=73  Identities=14%  Similarity=0.198  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH---HHcCC---C-EEe--eCCC-CcccccCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL---RSLGA---D-LAI--DYTK-ENIEDLPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~---~~~g~---~-~~~--~~~~-~~~~~~~~~~dvvi  219 (310)
                      .+.+|||+|++|.+|...+..+... |.+|++++++.++.+.+   .++..   . .++  +..+ +.+.....++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLER-GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC-CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            4678999999999999988877764 99999988876643222   22211   1 122  2221 22222335789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      .+++
T Consensus        83 h~A~   86 (337)
T 2c29_D           83 HVAT   86 (337)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            8864

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.63  E-value=0.12  Score=44.37  Aligned_cols=113  Identities=19%  Similarity=0.206  Sum_probs=67.5

Q ss_pred             cccchHHHHHHHHHh---------cc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH-HHHHHcCCC-
Q 021628          131 SLPLATETAYEGLER---------SA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRSLGAD-  198 (310)
Q Consensus       131 ~~~~~~~ta~~al~~---------~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~~~~g~~-  198 (310)
                      .+||....+...++.         .. --.|.+++|+|+...+|..+++++... |+.|+++.++..+. +...+++.. 
T Consensus       147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCchHHHHhHHHHHhhhc
Confidence            446554444444443         22 347899999995446799999999886 89999888764432 111222210 


Q ss_pred             EEee----CCCCcccccCCCccEEEeCCCChHH--HHhhcccCCEEEEEeCC
Q 021628          199 LAID----YTKENIEDLPEKFDVVFDAVGQCDK--ALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       199 ~~~~----~~~~~~~~~~~~~dvvi~~~g~~~~--~~~~l~~~G~~v~~g~~  244 (310)
                      +...    .+..++.+....+|+||.++|....  .-++++++..++.+|..
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             ccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCC
Confidence            0000    0002333344579999999986422  22457888888888764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=94.63  E-value=0.041  Score=46.77  Aligned_cols=69  Identities=23%  Similarity=0.267  Sum_probs=44.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|+|+|++|.+|...+..+... |.+|+++++++++.......+...+ .+..+..+.....+ |+||++++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             EEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            6999999999999988887774 9999999986654332211222211 12222223333334 99999986

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.62  E-value=0.071  Score=43.98  Aligned_cols=76  Identities=24%  Similarity=0.329  Sum_probs=46.0

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHH----HHHcCCC-EEeeCCCCcccc----------
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDL----LRSLGAD-LAIDYTKENIED----------  210 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~----~~~~g~~-~~~~~~~~~~~~----------  210 (310)
                      ...++++|||+|+++++|.+.+..+... |++|++++ ++.++.+.    +++.+.. ..+..+-.+...          
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKD-GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHT-TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3457889999999999999977776664 99999887 45444332    2334432 222222111111          


Q ss_pred             cCCCccEEEeCCC
Q 021628          211 LPEKFDVVFDAVG  223 (310)
Q Consensus       211 ~~~~~dvvi~~~g  223 (310)
                      ...++|++|+++|
T Consensus        88 ~~g~id~lv~~Ag  100 (256)
T 3ezl_A           88 EVGEIDVLVNNAG  100 (256)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence            1237899999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=94.62  E-value=0.062  Score=45.57  Aligned_cols=93  Identities=14%  Similarity=0.204  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh--hhHHHH----HHcCCCEEe-eCCCCcccc----------cC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST--AKLDLL----RSLGADLAI-DYTKENIED----------LP  212 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~--~~~~~~----~~~g~~~~~-~~~~~~~~~----------~~  212 (310)
                      .|+++||+|+++++|.+.+..+... |++|++++++.  ++.+.+    ++.+..... ..+-.+...          ..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYARE-GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999988876664 99999988762  233322    334543322 111111111          01


Q ss_pred             CCccEEEeCCCC------h-----------------------HHHHhhcccCCEEEEEeC
Q 021628          213 EKFDVVFDAVGQ------C-----------------------DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       213 ~~~dvvi~~~g~------~-----------------------~~~~~~l~~~G~~v~~g~  243 (310)
                      .++|++|+++|.      +                       +.++..+.++|+++.++.
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS  186 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS  186 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            378999998761      0                       233456677899998864

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=94.62  E-value=0.012  Score=49.04  Aligned_cols=85  Identities=16%  Similarity=0.292  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCCCC-h-
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C-  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-~-  225 (310)
                      .+ +++|+| +|++|.+++..+... |+ ++++..++.++.+.+. +++.   ...  ++..+...++|+||+|++. . 
T Consensus       108 ~~-~vliiG-aGg~a~ai~~~L~~~-G~~~I~v~nR~~~ka~~la~~~~~---~~~--~~~~~~~~~aDiVInatp~gm~  179 (253)
T 3u62_A          108 KE-PVVVVG-AGGAARAVIYALLQM-GVKDIWVVNRTIERAKALDFPVKI---FSL--DQLDEVVKKAKSLFNTTSVGMK  179 (253)
T ss_dssp             CS-SEEEEC-CSHHHHHHHHHHHHT-TCCCEEEEESCHHHHHTCCSSCEE---EEG--GGHHHHHHTCSEEEECSSTTTT
T ss_pred             CC-eEEEEC-cHHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHccc---CCH--HHHHhhhcCCCEEEECCCCCCC
Confidence            46 999999 899999988877775 87 8999999988876552 2221   111  1222223478999999752 1 


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          .-....++++..++.+.
T Consensus       180 p~~~~i~~~~l~~~~~V~Div  200 (253)
T 3u62_A          180 GEELPVSDDSLKNLSLVYDVI  200 (253)
T ss_dssp             SCCCSCCHHHHTTCSEEEECS
T ss_pred             CCCCCCCHHHhCcCCEEEEee
Confidence                01123456666666554

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=94.60  E-value=0.069  Score=48.53  Aligned_cols=91  Identities=23%  Similarity=0.293  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCE-EeeCCCC-cccccCCCccEEEeCCCCh-
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADL-AIDYTKE-NIEDLPEKFDVVFDAVGQC-  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~-~~~~~~~-~~~~~~~~~dvvi~~~g~~-  225 (310)
                      .+.+|+|+| +|.+|.+.+..+....+.+|++++++.++.+.+.+ .+... .++..+. ++.....++|+||+|++.. 
T Consensus        22 ~~k~VlIiG-AGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~  100 (467)
T 2axq_A           22 MGKNVLLLG-SGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTF  100 (467)
T ss_dssp             -CEEEEEEC-CSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGG
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhh
Confidence            356899999 59999998877665336788899999888776643 23322 1222211 2222234799999999842 


Q ss_pred             --HHHHhhcccCCEEEEE
Q 021628          226 --DKALKAVKEGGRVVSI  241 (310)
Q Consensus       226 --~~~~~~l~~~G~~v~~  241 (310)
                        .....++.++-.++..
T Consensus       101 ~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A          101 HPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             HHHHHHHHHHHTCEEEEC
T ss_pred             hHHHHHHHHhcCCEEEEe
Confidence              2233566666666654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=94.56  E-value=0.074  Score=45.40  Aligned_cols=87  Identities=31%  Similarity=0.430  Sum_probs=55.5

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHH---HHcCCCEE-eeCCC-CcccccCCCccEEEeCCCC-
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLL---RSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVGQ-  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~---~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g~-  224 (310)
                      .+|+|+|++|.+|...+..+... |.+|++++++++ +.+.+   ...+...+ .|..+ +++....+++|+||.+++. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            47999999999999988887774 899999999764 44333   33444322 12222 1222334589999999872 


Q ss_pred             ----hHHHHhhccc---CCEEE
Q 021628          225 ----CDKALKAVKE---GGRVV  239 (310)
Q Consensus       225 ----~~~~~~~l~~---~G~~v  239 (310)
                          ...+++.+..   -++++
T Consensus        91 ~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           91 QILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             GSTTHHHHHHHHHHHCCCCEEE
T ss_pred             hhHHHHHHHHHHHhcCCCCEEE
Confidence                2444444433   24676

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=94.56  E-value=0.064  Score=45.06  Aligned_cols=42  Identities=29%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~   51 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAA-GASVMIVGRNPDKLAGA   51 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988876664 99999999998876554

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=94.56  E-value=0.12  Score=43.11  Aligned_cols=92  Identities=21%  Similarity=0.267  Sum_probs=61.9

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhh--cCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCccE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~--~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~dv  217 (310)
                      .+++|.+||=+| +| .|..+..+++..  .|++++.++.+++-++.+++    .+..   .++..+-.++.  ...+|+
T Consensus        67 ~~~~~~~vLDlG-cG-tG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~--~~~~d~  142 (261)
T 4gek_A           67 FVQPGTQVYDLG-CS-LGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIA--IENASM  142 (261)
T ss_dssp             HCCTTCEEEEET-CT-TTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCC--CCSEEE
T ss_pred             hCCCCCEEEEEe-CC-CCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccc--cccccc
Confidence            478999999998 44 577888888753  26789999999998887754    3322   12222222211  246888


Q ss_pred             EEeCCC-C----------hHHHHhhcccCCEEEEEe
Q 021628          218 VFDAVG-Q----------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~~g-~----------~~~~~~~l~~~G~~v~~g  242 (310)
                      |+.... +          ++++.+.|+|||+++...
T Consensus       143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            876532 1          257778999999998764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.55  E-value=0.087  Score=44.74  Aligned_cols=83  Identities=16%  Similarity=0.156  Sum_probs=57.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC------  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~------  225 (310)
                      .+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|....     .+..+..+ +|+||.|++..      
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~-aDvvi~~vp~~~~~~~v   87 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEW-PGGVTVYDIRIEAMTPLAEAGATLA-----DSVADVAA-ADLIHITVLDDAQVREV   87 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTS-TTCEEEECSSTTTSHHHHHTTCEEC-----SSHHHHTT-SSEEEECCSSHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHCCCEEc-----CCHHHHHh-CCEEEEECCChHHHHHH
Confidence            4799999 999999877777764 8999999999999888877765321     12233345 78888887732      


Q ss_pred             -HHHHhhcccCCEEEEEe
Q 021628          226 -DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g  242 (310)
                       ......++++..++..+
T Consensus        88 ~~~l~~~l~~g~ivv~~s  105 (296)
T 3qha_A           88 VGELAGHAKPGTVIAIHS  105 (296)
T ss_dssp             HHHHHTTCCTTCEEEECS
T ss_pred             HHHHHHhcCCCCEEEEeC
Confidence             23344556666666554

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=94.52  E-value=0.034  Score=48.18  Aligned_cols=83  Identities=28%  Similarity=0.342  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++.  +++. ..    ..  ++.+....+|+|+.+.+.     
T Consensus       144 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~~----~~--~l~ell~~aDvV~~~~P~~~~t~  212 (333)
T 1dxy_A          144 GQQTVGVMG-TGHIGQVAIKLFKGF-GAKVIAYDPYPMKG--DHPD-FD----YV--SLEDLFKQSDVIDLHVPGIEQNT  212 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSS--CCTT-CE----EC--CHHHHHHHCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCcchh--hHhc-cc----cC--CHHHHHhcCCEEEEcCCCchhHH
Confidence            578999999 999999999999985 99999999876543  1111 11    11  233334578999998762     


Q ss_pred             --h-HHHHhhcccCCEEEEEeC
Q 021628          225 --C-DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~  243 (310)
                        + ...+..|++++.++.++.
T Consensus       213 ~li~~~~l~~mk~ga~lIn~sr  234 (333)
T 1dxy_A          213 HIINEAAFNLMKPGAIVINTAR  234 (333)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence              1 467889999999988864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.51  E-value=0.033  Score=48.80  Aligned_cols=73  Identities=23%  Similarity=0.208  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEe-eCC-C-CcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAI-DYT-K-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~-~~~-~-~~~~~~~~~~dvvi~~~g  223 (310)
                      +.+|+|+|++|.+|...+..+....|.+|+++++++++...+.+ .+...+. +.. + +.+....+++|+||++++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            46899999999999998886665237899999998776554432 2222221 222 1 112222347999999876

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.50  E-value=0.1  Score=47.23  Aligned_cols=89  Identities=20%  Similarity=0.262  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEe--eCCC-CcccccCCCccEEEeCCCC-h
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAI--DYTK-ENIEDLPEKFDVVFDAVGQ-C  225 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~--~~~~-~~~~~~~~~~dvvi~~~g~-~  225 (310)
                      +.+|+|+| +|.+|.+.+..+... |.+|+++++++++.+.+. +++....+  +..+ ++......++|+|++|++. .
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~-G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   80 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence            56899999 899999988877774 889999999988776553 33321122  2221 1222223479999999984 2


Q ss_pred             --HHHHhhcccCCEEEEE
Q 021628          226 --DKALKAVKEGGRVVSI  241 (310)
Q Consensus       226 --~~~~~~l~~~G~~v~~  241 (310)
                        .....++.++-.++..
T Consensus        81 ~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             HHHHHHHHHHHTCEEEES
T ss_pred             chHHHHHHHhCCCeEEEe
Confidence              2334556666565544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=94.50  E-value=0.017  Score=48.24  Aligned_cols=67  Identities=18%  Similarity=0.220  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCc---ccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKEN---IEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~---~~~~~~~~dvvi~~~g  223 (310)
                      +.+|+|+|++|.+|...+..+... |.+|+++++++.+..     +.. ..+..+-.+   .....+++|++|+++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~-G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM-AEILRLADLSPLDPA-----GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG-EEEEEEEESSCCCCC-----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc-CCEEEEEecCCcccc-----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            468999999999999988877774 899999999876543     211 122221111   2222348999999986

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.49  E-value=0.29  Score=39.23  Aligned_cols=69  Identities=14%  Similarity=0.126  Sum_probs=50.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCc---ccc-cCCCccEEEeCCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKEN---IED-LPEKFDVVFDAVGQ  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~---~~~-~~~~~dvvi~~~g~  224 (310)
                      +|+|.| .|.+|...++.+... |.+++++++++++.+.+. +.+... +..+..+   +.. ...++|+++-++++
T Consensus         2 ~iiIiG-~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIG-GETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLKATI-IHGDGSHKEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEEC-CHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSSSEE-EESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcCCeE-EEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence            489999 799999988888874 999999999999988764 456543 3332222   111 24589999999885

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=94.48  E-value=0.29  Score=39.01  Aligned_cols=93  Identities=14%  Similarity=0.113  Sum_probs=63.0

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--CEEeeCCCCcccccCCCccEEEeCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ....+++.+||-+| +| .|..+..+++.  +.+++.++.+++..+.+++...  -.++..+-...... +.+|+|+...
T Consensus        40 ~~~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~  114 (220)
T 3hnr_A           40 DVVNKSFGNVLEFG-VG-TGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY  114 (220)
T ss_dssp             HHHHTCCSEEEEEC-CT-TSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES
T ss_pred             HhhccCCCeEEEeC-CC-CCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc
Confidence            33445889999998 44 57788888775  7899999999998888865422  11222222222222 6799998763


Q ss_pred             C--C---------hHHHHhhcccCCEEEEEe
Q 021628          223 G--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      .  .         +..+.+.|+|+|+++...
T Consensus       115 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          115 AFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             chhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            2  1         257778999999998774

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=94.48  E-value=0.037  Score=47.89  Aligned_cols=69  Identities=19%  Similarity=0.240  Sum_probs=44.9

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCC-CcccccCCCccEEEeCCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      -..+.+|||+|++|.+|...+..+... |.+|+++++++++      .+...+. +..+ +.+.....++|+||.+++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQ-GRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHT-TCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhC-CCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            345778999999999999999888775 9999999997665      2222221 2221 112223348999999876

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=94.44  E-value=0.014  Score=50.15  Aligned_cols=84  Identities=17%  Similarity=0.271  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++++++.+     +......  ..++.+.....|+|+.+.+.     
T Consensus       138 ~g~tvGIiG-~G~IG~~vA~~l~~~-G~~V~~~dr~~~~~~-----~~~~~~~--~~~l~ell~~aDiV~l~~Plt~~t~  208 (315)
T 3pp8_A          138 EEFSVGIMG-AGVLGAKVAESLQAW-GFPLRCWSRSRKSWP-----GVESYVG--REELRAFLNQTRVLINLLPNTAQTV  208 (315)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTT-TCCEEEEESSCCCCT-----TCEEEES--HHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHC-CCEEEEEcCCchhhh-----hhhhhcc--cCCHHHHHhhCCEEEEecCCchhhh
Confidence            478999999 999999999999985 999999998765432     1111110  11233334577888887651     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       209 ~li~~~~l~~mk~gailIN~a  229 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLA  229 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             hhccHHHHhhCCCCCEEEECC
Confidence              1 56778888888888776

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.42  E-value=0.093  Score=44.80  Aligned_cols=88  Identities=17%  Similarity=0.333  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh------hhHHHHH---HcCCCEE-eeCCC-CcccccCCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST------AKLDLLR---SLGADLA-IDYTK-ENIEDLPEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~------~~~~~~~---~~g~~~~-~~~~~-~~~~~~~~~~dvvi  219 (310)
                      ..+|+|+|++|.+|...+..+... |.+|+++++++      ++.+.++   ..+...+ .|..+ +.+....+++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            357999999999999988877774 89999999975      3433332   2344322 12222 12223345899999


Q ss_pred             eCCCC-----hHHHHhhcccC---CEEE
Q 021628          220 DAVGQ-----CDKALKAVKEG---GRVV  239 (310)
Q Consensus       220 ~~~g~-----~~~~~~~l~~~---G~~v  239 (310)
                      ++++.     ...+++.+...   ++|+
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            99872     24445544433   4776

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=94.42  E-value=0.06  Score=44.69  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC-hhhHHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLR  193 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~-~~~~~~~~  193 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++.++ ++..+.++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~~~   49 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAK-GYSVTVTYHSDTTAMETMK   49 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence            3578999999999999988777664 9999998764 44444443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=94.41  E-value=0.036  Score=48.41  Aligned_cols=37  Identities=27%  Similarity=0.308  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHh--hcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKH--VFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~--~~g~~vi~~~~~~~  187 (310)
                      .+.+|+|+|++|.+|...+..+..  . |.+|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEECCCc
Confidence            467999999999999998877666  5 899999998654

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=94.41  E-value=0.14  Score=43.93  Aligned_cols=83  Identities=16%  Similarity=0.033  Sum_probs=54.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecCh-------hhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSST-------AKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+|.|+| .|.+|...+..+... | .+|++.++++       +..+.+.+.|.   ...   +..+...++|+||.|++
T Consensus        25 m~IgvIG-~G~mG~~lA~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~---s~~e~~~~aDvVi~avp   96 (317)
T 4ezb_A           25 TTIAFIG-FGEAAQSIAGGLGGR-NAARLAAYDLRFNDPAASGALRARAAELGV---EPL---DDVAGIACADVVLSLVV   96 (317)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTT-TCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEE---SSGGGGGGCSEEEECCC
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHc-CCCeEEEEeCCCccccchHHHHHHHHHCCC---CCC---CHHHHHhcCCEEEEecC
Confidence            4799999 999999877776664 8 8999999887       45555555665   110   12233456788888876


Q ss_pred             C------hHHHHhhcccCCEEEEEe
Q 021628          224 Q------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ~------~~~~~~~l~~~G~~v~~g  242 (310)
                      .      .......++++..++..+
T Consensus        97 ~~~~~~~~~~i~~~l~~~~ivv~~s  121 (317)
T 4ezb_A           97 GAATKAVAASAAPHLSDEAVFIDLN  121 (317)
T ss_dssp             GGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred             CHHHHHHHHHHHhhcCCCCEEEECC
Confidence            3      134445566666666554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.41  E-value=0.093  Score=44.44  Aligned_cols=72  Identities=25%  Similarity=0.409  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh------hhHHHHHH---cCCCEE-eeCCC-CcccccCCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST------AKLDLLRS---LGADLA-IDYTK-ENIEDLPEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~------~~~~~~~~---~g~~~~-~~~~~-~~~~~~~~~~dvvi  219 (310)
                      ..+|+|+|++|.+|...+..+... |.+|++++++.      ++.+.++.   .+...+ .+..+ +.+....+++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            357999999999999988877774 89999999863      34333332   343322 12222 11222234799999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      ++++
T Consensus        83 ~~a~   86 (308)
T 1qyc_A           83 STVG   86 (308)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.40  E-value=0.17  Score=42.59  Aligned_cols=87  Identities=22%  Similarity=0.265  Sum_probs=56.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-------------CCCE--------EeeCCCCcccc
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-------------GADL--------AIDYTKENIED  210 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-------------g~~~--------~~~~~~~~~~~  210 (310)
                      .+|.|+| +|.+|...++.+... |.+|++.++++++++.+.+.             +...        -+.. ..+..+
T Consensus         5 ~kV~VIG-aG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~   81 (283)
T 4e12_A            5 TNVTVLG-TGVLGSQIAFQTAFH-GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ   81 (283)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence            5899999 899999988877774 99999999999987766432             1100        0000 112223


Q ss_pred             cCCCccEEEeCCCC---h-----HHHHhhcccCCEEEEE
Q 021628          211 LPEKFDVVFDAVGQ---C-----DKALKAVKEGGRVVSI  241 (310)
Q Consensus       211 ~~~~~dvvi~~~g~---~-----~~~~~~l~~~G~~v~~  241 (310)
                      ...++|+||++++.   .     ......++++..+++.
T Consensus        82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~  120 (283)
T 4e12_A           82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN  120 (283)
T ss_dssp             HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred             HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence            34679999999873   1     3344456666665543

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=94.40  E-value=0.037  Score=47.95  Aligned_cols=102  Identities=21%  Similarity=0.254  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++.  +++. .    ...  ++.+....+|+|+.+.+.     
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~--~~~~-~----~~~--~l~ell~~aDvV~~~~p~t~~t~  213 (331)
T 1xdw_A          145 RNCTVGVVG-LGRIGRVAAQIFHGM-GATVIGEDVFEIKG--IEDY-C----TQV--SLDEVLEKSDIITIHAPYIKENG  213 (331)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCS--CTTT-C----EEC--CHHHHHHHCSEEEECCCCCTTTC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHC-CCEEEEECCCccHH--HHhc-c----ccC--CHHHHHhhCCEEEEecCCchHHH
Confidence            467999999 999999999999985 99999998876543  1111 1    111  233334578999988652     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        + ...++.|++++.++.++.-            .--+-+.+.+.+.++++.
T Consensus       214 ~li~~~~l~~mk~ga~lin~srg------------~~vd~~aL~~aL~~g~i~  254 (331)
T 1xdw_A          214 AVVTRDFLKKMKDGAILVNCARG------------QLVDTEAVIEAVESGKLG  254 (331)
T ss_dssp             CSBCHHHHHTSCTTEEEEECSCG------------GGBCHHHHHHHHHHTSEE
T ss_pred             HHhCHHHHhhCCCCcEEEECCCc------------ccccHHHHHHHHHhCCce
Confidence              1 5678899999999888621            112335566677777776

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.37  E-value=0.49  Score=36.55  Aligned_cols=95  Identities=19%  Similarity=0.255  Sum_probs=64.1

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC----EEeeCCCCcccccCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD----LAIDYTKENIEDLPEK  214 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~----~~~~~~~~~~~~~~~~  214 (310)
                      ++....+++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++    .+..    .+...+-... .....
T Consensus        45 ~~~~~~~~~~~vLdiG-~G-~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~  119 (194)
T 1dus_A           45 VENVVVDKDDDILDLG-CG-YGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VKDRK  119 (194)
T ss_dssp             HHHCCCCTTCEEEEET-CT-TSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CTTSC
T ss_pred             HHHcccCCCCeEEEeC-CC-CCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cccCC
Confidence            3555667899999998 55 58888887775  7899999999998777754    2322    2222222111 11347


Q ss_pred             ccEEEeCCC--C--------hHHHHhhcccCCEEEEEe
Q 021628          215 FDVVFDAVG--Q--------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       215 ~dvvi~~~g--~--------~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+|+....  .        ++.+.+.|+++|+++...
T Consensus       120 ~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  157 (194)
T 1dus_A          120 YNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVI  157 (194)
T ss_dssp             EEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence            999987543  1        256678899999998775

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=94.36  E-value=0.24  Score=40.92  Aligned_cols=90  Identities=18%  Similarity=0.286  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC-----
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-----  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g-----  223 (310)
                      .++.+||-+| +| .|..+..+++.  +.+++.++.+++.++.+++.....+...+........+.+|+|+....     
T Consensus        53 ~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~  128 (260)
T 2avn_A           53 KNPCRVLDLG-GG-TGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYV  128 (260)
T ss_dssp             CSCCEEEEET-CT-TCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred             CCCCeEEEeC-CC-cCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence            3788999998 44 57778788775  779999999999988887654322333322222222346999987532     


Q ss_pred             -C----hHHHHhhcccCCEEEEEe
Q 021628          224 -Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 -~----~~~~~~~l~~~G~~v~~g  242 (310)
                       .    +.++.+.|+|+|+++...
T Consensus       129 ~~~~~~l~~~~~~LkpgG~l~~~~  152 (260)
T 2avn_A          129 ENKDKAFSEIRRVLVPDGLLIATV  152 (260)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHcCCCeEEEEEe
Confidence             1    267778999999998653

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=94.35  E-value=0.064  Score=44.49  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.++.+... |++|+++++++++.+.+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   45 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKA-GATVYITGRHLDTLRVV   45 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4688999999999999988877774 99999999988876544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.32  E-value=0.35  Score=36.37  Aligned_cols=88  Identities=13%  Similarity=0.128  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC-hhhHHHHHH-c--CCCEEeeCCCCc---ccc-cCCCccEEEeCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDLLRS-L--GADLAIDYTKEN---IED-LPEKFDVVFDAV  222 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~-~~~~~~~~~-~--g~~~~~~~~~~~---~~~-~~~~~dvvi~~~  222 (310)
                      .++|+|.| .|.+|...++.+... |.+|++++++ +++.+.+++ +  +.. ++..+..+   +.. ...++|+|+-++
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            46799999 799999988888875 8999999997 465555542 2  333 33322222   111 245899999998


Q ss_pred             CCh------HHHHhhcccCCEEEEE
Q 021628          223 GQC------DKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g~~------~~~~~~l~~~G~~v~~  241 (310)
                      ++.      ....+.+.+..+++..
T Consensus        80 ~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           80 DNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCEEEEE
Confidence            742      2334455455666654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.32  E-value=0.23  Score=41.16  Aligned_cols=84  Identities=13%  Similarity=0.195  Sum_probs=55.2

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHHH-cCCCEEeeCCCCcccccCCCccEEEeCCCC--hHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLRS-LGADLAIDYTKENIEDLPEKFDVVFDAVGQ--CDK  227 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--~~~  227 (310)
                      -+|.|+| +|.+|...+..+... |.+ |.+.++++++.+.+.+ +|... ..    +..+....+|+||.|+..  ...
T Consensus        11 m~i~iiG-~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~g~~~-~~----~~~~~~~~~Dvvi~av~~~~~~~   83 (266)
T 3d1l_A           11 TPIVLIG-AGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKVEAEY-TT----DLAEVNPYAKLYIVSLKDSAFAE   83 (266)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHTTCEE-ES----CGGGSCSCCSEEEECCCHHHHHH
T ss_pred             CeEEEEc-CCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCce-eC----CHHHHhcCCCEEEEecCHHHHHH
Confidence            3699999 799999877766664 887 7788899888877744 46432 11    223334578999999873  233


Q ss_pred             HH----hhcccCCEEEEEe
Q 021628          228 AL----KAVKEGGRVVSII  242 (310)
Q Consensus       228 ~~----~~l~~~G~~v~~g  242 (310)
                      .+    ..++++..++.+.
T Consensus        84 v~~~l~~~~~~~~ivv~~s  102 (266)
T 3d1l_A           84 LLQGIVEGKREEALMVHTA  102 (266)
T ss_dssp             HHHHHHTTCCTTCEEEECC
T ss_pred             HHHHHHhhcCCCcEEEECC
Confidence            33    3444566666553

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.31  E-value=0.069  Score=46.28  Aligned_cols=88  Identities=22%  Similarity=0.329  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh----hhHHHHH---HcCCCEEe-eCCC-CcccccCC--CccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST----AKLDLLR---SLGADLAI-DYTK-ENIEDLPE--KFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~----~~~~~~~---~~g~~~~~-~~~~-~~~~~~~~--~~dvvi  219 (310)
                      ..+|+|+|++|.+|...+..+... |.+|+++++++    ++.+.++   ..+...+. +..+ +.+....+  ++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            357999999999999988887774 89999999976    4544333   33443221 2222 11222234  899999


Q ss_pred             eCCCC-----hHHHHhhcccCC---EEE
Q 021628          220 DAVGQ-----CDKALKAVKEGG---RVV  239 (310)
Q Consensus       220 ~~~g~-----~~~~~~~l~~~G---~~v  239 (310)
                      .+++.     ...+++.+...|   +++
T Consensus        89 ~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           89 STVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             ECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            99872     244555554444   565

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=94.30  E-value=0.28  Score=38.30  Aligned_cols=93  Identities=16%  Similarity=0.170  Sum_probs=61.9

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-C-EEeeCCCCcccccCCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-D-LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~-~~~~~~~~~~~~~~~~~dvv  218 (310)
                      .....++++||-+| +| .|..+..+++.  +.+++.++.+++..+.+++    .+. . .+...+-..... .+.+|+|
T Consensus        27 ~~~~~~~~~vLdiG-~G-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v  101 (199)
T 2xvm_A           27 AVKVVKPGKTLDLG-CG-NGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFI  101 (199)
T ss_dssp             HTTTSCSCEEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEE
T ss_pred             HhhccCCCeEEEEc-CC-CCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEE
Confidence            34456788999998 55 68888888875  7799999999988777754    232 1 222222222222 4579999


Q ss_pred             EeCCC-------C----hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG-------Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g-------~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +....       .    +..+.+.|+++|+++.+.
T Consensus       102 ~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  136 (199)
T 2xvm_A          102 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  136 (199)
T ss_dssp             EEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            86532       1    256778999999987664

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.29  E-value=0.096  Score=43.64  Aligned_cols=42  Identities=19%  Similarity=0.391  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDL  191 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~  191 (310)
                      ..+.+++|+|+++++|.+.+..+... |++|++++ ++.++.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~-G~~v~~~~~~~~~~~~~   65 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDA-GMAVAVSHSERNDHVST   65 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEECSCHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCchHHHHH
Confidence            35688999999999999987776664 99999988 45554443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.29  E-value=0.084  Score=45.16  Aligned_cols=66  Identities=18%  Similarity=0.152  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      -.+|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|....     .+..+....+|+||.|++
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEHGASVC-----ESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHHHCSEEEECCS
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHCCCeEc-----CCHHHHHHhCCEEEEEcC
Confidence            35799999 999999877777664 8999999999999888887765321     112222335677777765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=94.29  E-value=0.066  Score=44.36  Aligned_cols=42  Identities=21%  Similarity=0.311  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   54 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQD-GAHVVVSSRKQENVDRT   54 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4789999999999999988877764 99999999988776543

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=94.27  E-value=0.16  Score=40.45  Aligned_cols=91  Identities=20%  Similarity=0.250  Sum_probs=63.0

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-CCCEEeeCCCCcccccCCCccEEEeCCC-
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GADLAIDYTKENIEDLPEKFDVVFDAVG-  223 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~dvvi~~~g-  223 (310)
                      ..+.++.+||=+| +| .|..+..+++.  +.+++.++.+++.++.+++. +...+. .+-.... ..+.+|+|+.... 
T Consensus        39 ~~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~-~d~~~~~-~~~~fD~v~~~~~l  112 (211)
T 3e23_A           39 GELPAGAKILELG-CG-AGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRT-MLFHQLD-AIDAYDAVWAHACL  112 (211)
T ss_dssp             TTSCTTCEEEESS-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEE-CCGGGCC-CCSCEEEEEECSCG
T ss_pred             HhcCCCCcEEEEC-CC-CCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEE-eeeccCC-CCCcEEEEEecCch
Confidence            4566889999988 44 57788888875  77999999999988888653 433222 1111222 3457999987642 


Q ss_pred             ------C----hHHHHhhcccCCEEEEEe
Q 021628          224 ------Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ------~----~~~~~~~l~~~G~~v~~g  242 (310)
                            .    +..+.+.|+|+|+++..-
T Consensus       113 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          113 LHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence                  1    267778999999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=94.27  E-value=0.06  Score=46.34  Aligned_cols=72  Identities=24%  Similarity=0.265  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH--HHHHHcCC--C-EEeeCCCCcc---cccCC--CccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL--DLLRSLGA--D-LAIDYTKENI---EDLPE--KFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~--~~~~~~g~--~-~~~~~~~~~~---~~~~~--~~dvvi~  220 (310)
                      +.+|+|+|++|.+|...+..+... |.+|+++++++++.  +.+++++.  . ..+..+-.+.   ....+  ++|+||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEK-GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC-CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            578999999999999988877774 99999999876543  23444421  1 1221111111   11112  4699999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      +++
T Consensus        82 ~A~   84 (345)
T 2z1m_A           82 LAA   84 (345)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=94.26  E-value=0.11  Score=42.31  Aligned_cols=96  Identities=16%  Similarity=0.151  Sum_probs=63.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCc-cc-ccCCCc
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN-IE-DLPEKF  215 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~-~~~~~~  215 (310)
                      .....++.+||-+|  .+.|..+..+++...+.+++.++.+++..+.+++    .+..   .++..+... .. .....+
T Consensus        66 ~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~f  143 (232)
T 3ntv_A           66 LIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVY  143 (232)
T ss_dssp             HHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCE
T ss_pred             HHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCc
Confidence            34456788999998  4468888888885336789999999998877754    3432   223222222 22 224579


Q ss_pred             cEEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628          216 DVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       216 dvvi~~~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      |+|+-...  .    ++.+.+.|+|+|.++.-.
T Consensus       144 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~  176 (232)
T 3ntv_A          144 DMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN  176 (232)
T ss_dssp             EEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             cEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence            99985432  2    367789999999998743

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=94.25  E-value=0.38  Score=43.13  Aligned_cols=97  Identities=21%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCccc--ccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIE--DLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~--~~~~~~d  216 (310)
                      ....+++|++||=.| +|+ |..+.++++...+.++++++.++++++.+++    +|.. .++..+.....  .....+|
T Consensus       240 ~~l~~~~g~~VLDlg-aG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD  317 (429)
T 1sqg_A          240 TWLAPQNGEHILDLC-AAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFD  317 (429)
T ss_dssp             HHHCCCTTCEEEEES-CTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEE
T ss_pred             HHcCCCCcCeEEEEC-CCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCC
Confidence            345678999999988 554 7778888887533689999999999887743    4532 23333222222  1124699


Q ss_pred             EEEe---CCC--C--------------------------hHHHHhhcccCCEEEEEe
Q 021628          217 VVFD---AVG--Q--------------------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~---~~g--~--------------------------~~~~~~~l~~~G~~v~~g  242 (310)
                      .|+-   |+|  .                          +..+++.|++||+++...
T Consensus       318 ~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          318 RILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             EEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            9985   443  1                          246778899999998654

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=94.22  E-value=0.11  Score=44.86  Aligned_cols=90  Identities=13%  Similarity=0.153  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +...+++|+| +|..|...+..+....+ .++.+.++++++.+.+ ++++   ....  .  .+..+.. ++|+|+.|++
T Consensus       123 ~~~~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~--~--~~~~e~v-~aDvVi~aTp  196 (322)
T 1omo_A          123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS--V--QPAEEAS-RCDVLVTTTP  196 (322)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE--E--CCHHHHT-SSSEEEECCC
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE--E--CCHHHHh-CCCEEEEeeC
Confidence            4567999999 89999887765554334 4677888898887666 3333   1111  1  2333445 7999999987


Q ss_pred             ChHHH--HhhcccCCEEEEEeCC
Q 021628          224 QCDKA--LKAVKEGGRVVSIIGS  244 (310)
Q Consensus       224 ~~~~~--~~~l~~~G~~v~~g~~  244 (310)
                      +....  ..+++++-.++.+|.+
T Consensus       197 ~~~pv~~~~~l~~G~~V~~ig~~  219 (322)
T 1omo_A          197 SRKPVVKAEWVEEGTHINAIGAD  219 (322)
T ss_dssp             CSSCCBCGGGCCTTCEEEECSCC
T ss_pred             CCCceecHHHcCCCeEEEECCCC
Confidence            43222  2577887777777654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.20  E-value=0.068  Score=42.39  Aligned_cols=68  Identities=24%  Similarity=0.332  Sum_probs=44.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCccc---ccC---CCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIE---DLP---EKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~---~~~---~~~dvvi~~~g  223 (310)
                      .+++|+|++|.+|...+..+.. .  +|+++++++++.+.+. +++. ..+..+-.+..   ...   .++|++|+++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~-~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKG-H--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTT-S--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh-C--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            3689999999999988777665 2  8999999988776653 3332 23222211111   111   27999999986

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=94.20  E-value=0.083  Score=44.68  Aligned_cols=88  Identities=17%  Similarity=0.299  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC----CE--EeeCCCCcccccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA----DL--AIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~----~~--~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .+.+++|+| +|++|.+.+..+... | +|+++.++.++.+.+ ++++.    ..  .++..  ++.+..+++|++|+++
T Consensus       127 ~~k~vlV~G-aGgiG~aia~~L~~~-G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~--~~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYG-AGGAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS--GLDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE--CTTCCCTTCCEEEECS
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHC-C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEe--eHHHhhCCCCEEEECC
Confidence            578999999 579999988887775 8 999999988876555 33321    00  01111  1123345799999998


Q ss_pred             CChH--------H-HHhhcccCCEEEEEe
Q 021628          223 GQCD--------K-ALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g~~~--------~-~~~~l~~~G~~v~~g  242 (310)
                      |...        . ....+.++..++.+.
T Consensus       202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~  230 (287)
T 1nvt_A          202 PIGMYPNIDVEPIVKAEKLREDMVVMDLI  230 (287)
T ss_dssp             CTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence            7321        1 234566666666665

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=94.20  E-value=0.13  Score=42.01  Aligned_cols=116  Identities=17%  Similarity=0.187  Sum_probs=71.8

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccc---cCCCccE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED---LPEKFDV  217 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~---~~~~~dv  217 (310)
                      .++++++||=+| +| .|..++.+++...+.+|+.++.+++..+.+++    .+..  .++..+.+++..   ....+|+
T Consensus        67 ~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~  144 (240)
T 1xdz_A           67 DFNQVNTICDVG-AG-AGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDI  144 (240)
T ss_dssp             CGGGCCEEEEEC-SS-SCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred             ccCCCCEEEEec-CC-CCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccE
Confidence            346788999998 44 56667777764336789999999988877753    4432  223332222221   1357999


Q ss_pred             EEeCC-CC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          218 VFDAV-GQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       218 vi~~~-g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      |+... ..    +..+.+.|+++|+++..-+.           ...+.+.++.+.+.+.....
T Consensus       145 V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g~-----------~~~~~~~~~~~~l~~~g~~~  196 (240)
T 1xdz_A          145 VTARAVARLSVLSELCLPLVKKNGLFVALKAA-----------SAEEELNAGKKAITTLGGEL  196 (240)
T ss_dssp             EEEECCSCHHHHHHHHGGGEEEEEEEEEEECC------------CHHHHHHHHHHHHHTTEEE
T ss_pred             EEEeccCCHHHHHHHHHHhcCCCCEEEEEeCC-----------CchHHHHHHHHHHHHcCCeE
Confidence            98653 33    36677899999999876321           12334555666666655443

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.20  E-value=0.062  Score=45.37  Aligned_cols=65  Identities=20%  Similarity=0.191  Sum_probs=45.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      +|.|+| .|.+|...+..+... |.+|++.++++++.+.+.+.|....     .+..+...++|+||.|++.
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~~advvi~~v~~   67 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRA-GFDVTVWNRNPAKCAPLVALGARQA-----SSPAEVCAACDITIAMLAD   67 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHH-TCCEEEECSSGGGGHHHHHHTCEEC-----SCHHHHHHHCSEEEECCSS
T ss_pred             eEEEEc-cCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHHcCCEEEEEcCC
Confidence            688999 999999877766664 8999999999999888877664321     1112222356777777653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=94.19  E-value=0.088  Score=43.77  Aligned_cols=42  Identities=24%  Similarity=0.181  Sum_probs=35.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.++.+... |++|+++++++++.+.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   47 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQC   47 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4679999999999999988877774 99999999988776543

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=94.18  E-value=0.035  Score=48.84  Aligned_cols=105  Identities=16%  Similarity=0.171  Sum_probs=64.4

Q ss_pred             HHHHHHhcccC-CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecCh-------hhHHHHHHcCCCEE-eeCCCCcc
Q 021628          139 AYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST-------AKLDLLRSLGADLA-IDYTKENI  208 (310)
Q Consensus       139 a~~al~~~~~~-~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~-------~~~~~~~~~g~~~~-~~~~~~~~  208 (310)
                      -+.+++..+.+ +..+|+|.| +|..|..++.++..+ |. ++++++++-       +++...++.-+... ......++
T Consensus       175 ll~al~l~g~~l~d~kVVi~G-AGaAG~~iA~ll~~~-Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L  252 (398)
T 2a9f_A          175 IFNSLKLLKKSLDEVSIVVNG-GGSAGLSITRKLLAA-GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTL  252 (398)
T ss_dssp             HHHHHHTTTCCTTSCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSC
T ss_pred             HHHHHHHhCCCCCccEEEEEC-CCHHHHHHHHHHHHc-CCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhH
Confidence            34445543333 445899999 999999999999997 88 888888762       22222211100000 00111223


Q ss_pred             cccCCCccEEEeCCC-C--hHHHHhhcccCCEEEEEeCCC
Q 021628          209 EDLPEKFDVVFDAVG-Q--CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g-~--~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .+..+++|++|-+++ .  .++.++.|+++..++.++.+.
T Consensus       253 ~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          253 EDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             SHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             HHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            333457899998865 2  388889999888888776653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.17  E-value=0.21  Score=44.19  Aligned_cols=38  Identities=24%  Similarity=0.326  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHh-hcCCcEEEEecChh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKH-VFGASKVAATSSTA  187 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~-~~g~~vi~~~~~~~  187 (310)
                      ..++++||+|+++++|.+.+..+.. . |++|+++.++.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~-GA~Vv~~~~~~~   83 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGC-GADTLGVFFERP   83 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHH-CCEEEEEECCCC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhc-CCEEEEEeCCch
Confidence            5577889999999999986665544 5 999998876543

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=94.17  E-value=0.54  Score=40.67  Aligned_cols=110  Identities=12%  Similarity=0.152  Sum_probs=66.8

Q ss_pred             EEEEEcCCcchHHH-HHHHHHhhcCCcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628          153 SILVLGGAGGVGTM-VIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (310)
Q Consensus       153 ~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~  226 (310)
                      +|.|+| +|.+|.. .+...+...+.+++++ ++++++.+.+ +++|...++..-++.+.  ...+|+|+-|+++   .+
T Consensus        25 rigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~--~~~iDaV~I~tP~~~H~~  101 (350)
T 4had_A           25 RFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLA--SDVIDAVYIPLPTSQHIE  101 (350)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHH--CSSCSEEEECSCGGGHHH
T ss_pred             EEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhc--CCCCCEEEEeCCCchhHH
Confidence            689999 8999975 3555554446788755 5587776655 77887665532221111  2478999999874   46


Q ss_pred             HHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          227 KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      .+.++|. .|+-|++-.+..         ...+..++++++.++.....
T Consensus       102 ~~~~al~-aGkhVl~EKPla---------~~~~ea~~l~~~a~~~~~~l  140 (350)
T 4had_A          102 WSIKAAD-AGKHVVCEKPLA---------LKAGDIDAVIAARDRNKVVV  140 (350)
T ss_dssp             HHHHHHH-TTCEEEECSCCC---------SSGGGGHHHHHHHHHHTCCE
T ss_pred             HHHHHHh-cCCEEEEeCCcc---------cchhhHHHHHHHHHHcCCce
Confidence            6777775 456666754321         12234455555555544443

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=94.16  E-value=0.87  Score=39.05  Aligned_cols=107  Identities=18%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEE-EecChhhHHHH-HHcCCCEEeeCCCCccccc--CCCccEEEeCCCC---h
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ---C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~dvvi~~~g~---~  225 (310)
                      +|.|+| .|.+|...+..++...+.+++. .++++++.+.+ ++++..  +.    ++.+.  ...+|+|+.|++.   .
T Consensus         5 ~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~----~~~~~l~~~~~D~V~i~tp~~~h~   77 (331)
T 4hkt_A            5 RFGLLG-AGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE--VR----TIDAIEAAADIDAVVICTPTDTHA   77 (331)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE--EC----CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC--cC----CHHHHhcCCCCCEEEEeCCchhHH
Confidence            688999 8999987777665533677774 56688876665 566654  21    22222  2378999999873   3


Q ss_pred             HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          226 DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      +.+..++..+ +-+.+..+.         ....+..+++.++.++......
T Consensus        78 ~~~~~al~~g-k~v~~EKP~---------~~~~~~~~~l~~~a~~~g~~~~  118 (331)
T 4hkt_A           78 DLIERFARAG-KAIFCEKPI---------DLDAERVRACLKVVSDTKAKLM  118 (331)
T ss_dssp             HHHHHHHHTT-CEEEECSCS---------CSSHHHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHcC-CcEEEecCC---------CCCHHHHHHHHHHHHHcCCeEE
Confidence            5666666654 555554321         1234566667777776665544

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.15  E-value=0.068  Score=44.90  Aligned_cols=42  Identities=21%  Similarity=0.410  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~   46 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEET   46 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999998876654

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.14  E-value=0.32  Score=43.29  Aligned_cols=97  Identities=21%  Similarity=0.243  Sum_probs=63.2

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecChhhHHHHH-----------HcCC--CE--EeeCCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSSTAKLDLLR-----------SLGA--DL--AIDYTKE  206 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~~~~~~~~~-----------~~g~--~~--~~~~~~~  206 (310)
                      +....++++++|+=+|  .+.|..++++|+.. ++. ++.++.+++-.+.++           .+|.  ..  ++..+-.
T Consensus       166 l~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~  242 (438)
T 3uwp_A          166 IDEIKMTDDDLFVDLG--SGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  242 (438)
T ss_dssp             HHHHCCCTTCEEEEES--CTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred             HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence            4667889999999888  45688889998874 775 999999986554443           2342  22  2222211


Q ss_pred             cccc--cCCCccEEEeCC---C-C----hHHHHhhcccCCEEEEEe
Q 021628          207 NIED--LPEKFDVVFDAV---G-Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       207 ~~~~--~~~~~dvvi~~~---g-~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +...  ....+|+|+...   . .    +.+.++.|+|||+++..-
T Consensus       243 ~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE  288 (438)
T 3uwp_A          243 SEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  288 (438)
T ss_dssp             SHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred             CCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence            1111  113689998532   1 1    356788999999999773

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=94.14  E-value=0.2  Score=41.38  Aligned_cols=95  Identities=18%  Similarity=0.155  Sum_probs=63.6

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ......++.+||=+| +| .|..+..+++.  +.+++.++.+++..+.+++...-.+...+-++.....+.+|+|+....
T Consensus        28 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~  103 (261)
T 3ege_A           28 NLLNLPKGSVIADIG-AG-TGGYSVALANQ--GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILA  103 (261)
T ss_dssp             HHHCCCTTCEEEEET-CT-TSHHHHHHHTT--TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESC
T ss_pred             HHhCCCCCCEEEEEc-Cc-ccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcch
Confidence            445568899999998 44 48888888873  789999999987776654432112222222222222357999987643


Q ss_pred             -----C----hHHHHhhcccCCEEEEEeC
Q 021628          224 -----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       224 -----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                           .    +.++.+.|+ +|+++....
T Consensus       104 l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~  131 (261)
T 3ege_A          104 IHHFSHLEKSFQEMQRIIR-DGTIVLLTF  131 (261)
T ss_dssp             GGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred             HhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence                 2    367888999 998887754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.12  E-value=0.054  Score=46.56  Aligned_cols=42  Identities=21%  Similarity=0.164  Sum_probs=31.4

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      ....++.+|||+|++|.+|...+..+... |.+|+++++++++
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~   50 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSS   50 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSS
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence            34578899999999999999988877774 8999999986653

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.08  E-value=0.11  Score=47.98  Aligned_cols=70  Identities=30%  Similarity=0.448  Sum_probs=45.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccc-cCCCccEEEeCCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIED-LPEKFDVVFDAVGQ  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~-~~~~~dvvi~~~g~  224 (310)
                      .+.+++|+| +|++|.+++..+... |++|+++.++.++.+.+ ++++.. +....  +... ....+|++++++|.
T Consensus       363 ~~k~vlV~G-aGGig~aia~~L~~~-G~~V~i~~R~~~~a~~la~~~~~~-~~~~~--dl~~~~~~~~DilVN~agv  434 (523)
T 2o7s_A          363 ASKTVVVIG-AGGAGKALAYGAKEK-GAKVVIANRTYERALELAEAIGGK-ALSLT--DLDNYHPEDGMVLANTTSM  434 (523)
T ss_dssp             ---CEEEEC-CSHHHHHHHHHHHHH-CC-CEEEESSHHHHHHHHHHTTC--CEETT--TTTTC--CCSEEEEECSST
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCc-eeeHH--HhhhccccCceEEEECCCC
Confidence            466899999 589999988877775 88999999998887666 456532 22222  1211 12348999999873

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=94.07  E-value=0.14  Score=47.05  Aligned_cols=64  Identities=19%  Similarity=0.185  Sum_probs=46.3

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +.+|||+|++|.+|...+..+... |.+|+++++++.+.+.       ...+..+ .......++|+||++++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~-G~~V~~l~R~~~~~~~-------v~~d~~~-~~~~~l~~~D~Vih~A~  210 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG-GHEVIQLVRKEPKPGK-------RFWDPLN-PASDLLDGADVLVHLAG  210 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESSSCCTTC-------EECCTTS-CCTTTTTTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCCccc-------eeecccc-hhHHhcCCCCEEEECCC
Confidence            679999999999999988888774 9999999998765321       1112221 22333468999999876

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=94.06  E-value=0.23  Score=41.32  Aligned_cols=96  Identities=22%  Similarity=0.283  Sum_probs=64.9

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~dvv  218 (310)
                      ...+.++.+||-+| +| .|..+..+++...+.+++.++.+++..+.+++    .+..  .++..+........+.+|+|
T Consensus        32 ~~~~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  109 (276)
T 3mgg_A           32 DTVYPPGAKVLEAG-CG-IGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHI  109 (276)
T ss_dssp             TCCCCTTCEEEETT-CT-TSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEE
T ss_pred             cccCCCCCeEEEec-CC-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEE
Confidence            45668899999998 44 58888888887325789999999988777754    2332  12222222222224579999


Q ss_pred             EeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          219 FDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +....     .    +..+.+.|+|+|.++...
T Consensus       110 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          110 FVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            86532     2    367788999999999864

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=94.06  E-value=0.19  Score=41.50  Aligned_cols=93  Identities=18%  Similarity=0.196  Sum_probs=62.2

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccc---cCCCccEE
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIED---LPEKFDVV  218 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~---~~~~~dvv  218 (310)
                      ..++.+||=+|  .+.|..++.+++...+.+|+.++.+++..+.+++    ++..  .++..+.+++..   ....||+|
T Consensus        78 ~~~~~~vLDiG--~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I  155 (249)
T 3g89_A           78 WQGPLRVLDLG--TGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARA  155 (249)
T ss_dssp             CCSSCEEEEET--CTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred             cCCCCEEEEEc--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEE
Confidence            35788998887  3356667777776335789999999998887753    4543  233333222221   12579999


Q ss_pred             EeCC-CC----hHHHHhhcccCCEEEEEe
Q 021628          219 FDAV-GQ----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       219 i~~~-g~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +... ..    ++.+.+.|+++|+++.+-
T Consensus       156 ~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          156 VARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             EEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             EECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            8753 33    367778999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.02  E-value=0.073  Score=45.20  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=35.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~   66 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEET   66 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999998876554

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=94.02  E-value=0.068  Score=46.45  Aligned_cols=82  Identities=16%  Similarity=0.221  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++.  . +.+... .     ++.+....+|+|+.+.+.     
T Consensus       147 ~gktvgIiG-lG~IG~~vA~~l~~~-G~~V~~~d~~~~~~--~-~~~~~~-~-----~l~ell~~aDvV~l~~Plt~~t~  215 (343)
T 2yq5_A          147 YNLTVGLIG-VGHIGSAVAEIFSAM-GAKVIAYDVAYNPE--F-EPFLTY-T-----DFDTVLKEADIVSLHTPLFPSTE  215 (343)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCGG--G-TTTCEE-C-----CHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCeEEEEe-cCHHHHHHHHHHhhC-CCEEEEECCChhhh--h-hccccc-c-----CHHHHHhcCCEEEEcCCCCHHHH
Confidence            478999999 999999999999985 99999999876541  1 111111 1     333444578999988762     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       216 ~li~~~~l~~mk~gailIN~a  236 (343)
T 2yq5_A          216 NMIGEKQLKEMKKSAYLINCA  236 (343)
T ss_dssp             TCBCHHHHHHSCTTCEEEECS
T ss_pred             HHhhHHHHhhCCCCcEEEECC
Confidence              1 57788999999999886

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=94.02  E-value=0.081  Score=45.11  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=43.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-Chhh---HHHHHHcCC---C-EEe--eCCC-CcccccCCCccEEE
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAK---LDLLRSLGA---D-LAI--DYTK-ENIEDLPEKFDVVF  219 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~---~~~~~~~g~---~-~~~--~~~~-~~~~~~~~~~dvvi  219 (310)
                      |.+|||+|++|.+|...+..+... |.+|+++++ ++++   ...+.++..   . .++  +..+ +.+....+++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLEN-GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHC-CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            568999999999999988877774 999998887 5432   222222210   0 122  2111 12222235789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      ++++
T Consensus        80 h~A~   83 (322)
T 2p4h_X           80 HTAS   83 (322)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            9874

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.00  E-value=0.014  Score=49.28  Aligned_cols=87  Identities=17%  Similarity=0.268  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-h-H
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-C-D  226 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-~-~  226 (310)
                      .+.+++|+| +|++|.+++..+... |+ +++++.|+.++.+.+.+- . .....  ++..+....+|+||+|++. . .
T Consensus       116 ~~k~vlvlG-aGg~g~aia~~L~~~-G~~~v~v~~R~~~~a~~la~~-~-~~~~~--~~~~~~~~~aDiVInaTp~Gm~~  189 (277)
T 3don_A          116 EDAYILILG-AGGASKGIANELYKI-VRPTLTVANRTMSRFNNWSLN-I-NKINL--SHAESHLDEFDIIINTTPAGMNG  189 (277)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHTT-CCSCCEEECSCGGGGTTCCSC-C-EEECH--HHHHHTGGGCSEEEECCC-----
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHh-c-ccccH--hhHHHHhcCCCEEEECccCCCCC
Confidence            578999999 799999988877775 87 899999998876544211 1 11111  1122234578999999763 1 1


Q ss_pred             H-----HHhhcccCCEEEEEe
Q 021628          227 K-----ALKAVKEGGRVVSII  242 (310)
Q Consensus       227 ~-----~~~~l~~~G~~v~~g  242 (310)
                      .     -...++++..++.+.
T Consensus       190 ~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          190 NTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             --CCSSCCTTCCSSCEEEESC
T ss_pred             CCcCCCCHHHcCCCCEEEEec
Confidence            1     234566666666664

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=93.99  E-value=0.07  Score=45.73  Aligned_cols=79  Identities=23%  Similarity=0.242  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++.++..      .    .  ..++.+....+|+|+.+.+.     
T Consensus       143 ~g~~vgIIG-~G~IG~~~A~~l~~~-G~~V~~~d~~~~~~~------~----~--~~~l~ell~~aDvV~l~~p~~~~t~  208 (311)
T 2cuk_A          143 QGLTLGLVG-MGRIGQAVAKRALAF-GMRVVYHARTPKPLP------Y----P--FLSLEELLKEADVVSLHTPLTPETH  208 (311)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSSS------S----C--BCCHHHHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEE-ECHHHHHHHHHHHHC-CCEEEEECCCCcccc------c----c--cCCHHHHHhhCCEEEEeCCCChHHH
Confidence            577999999 999999999999985 999999988765432      0    1  11222333467788777642     


Q ss_pred             --h-HHHHhhcccCCEEEEEe
Q 021628          225 --C-DKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g  242 (310)
                        + ...+..|+++..++.++
T Consensus       209 ~li~~~~l~~mk~ga~lin~s  229 (311)
T 2cuk_A          209 RLLNRERLFAMKRGAILLNTA  229 (311)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             hhcCHHHHhhCCCCcEEEECC
Confidence              1 35667788888887775

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=93.97  E-value=0.41  Score=39.88  Aligned_cols=92  Identities=23%  Similarity=0.299  Sum_probs=63.6

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC--CCEEeeCCCCcccccCCCccEEEeCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG--ADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      .....++.+||-+| +| .|..+..+++ . +.+++.++.+++.++.+++..  ... ...+...+.. ...+|+|+...
T Consensus        52 ~l~~~~~~~vLDiG-cG-~G~~~~~l~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~d~~~~~~-~~~fD~v~~~~  125 (279)
T 3ccf_A           52 LLNPQPGEFILDLG-CG-TGQLTEKIAQ-S-GAEVLGTDNAATMIEKARQNYPHLHF-DVADARNFRV-DKPLDAVFSNA  125 (279)
T ss_dssp             HHCCCTTCEEEEET-CT-TSHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHCTTSCE-EECCTTTCCC-SSCEEEEEEES
T ss_pred             HhCCCCCCEEEEec-CC-CCHHHHHHHh-C-CCeEEEEECCHHHHHHHHhhCCCCEE-EECChhhCCc-CCCcCEEEEcc
Confidence            34567889999998 44 5888888887 3 789999999999888886542  222 2222222222 35799998654


Q ss_pred             C-----C----hHHHHhhcccCCEEEEEe
Q 021628          223 G-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .     .    +.++.+.|+|+|+++..-
T Consensus       126 ~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          126 MLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             CGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            3     1    367788999999998753

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=93.97  E-value=0.21  Score=43.39  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=34.2

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~  195 (310)
                      -+|.|+| +|.+|...+..+... |.+|+++++++++.+.+++.
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~   46 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDR   46 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHhc
Confidence            3799999 899998877666664 88999999999988888654

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=93.96  E-value=0.19  Score=45.34  Aligned_cols=96  Identities=18%  Similarity=0.256  Sum_probs=62.0

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCC---cEEEEecChhhHHHHHHcCCCEEe-eCCCCc----ccccCCCccEE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA---SKVAATSSTAKLDLLRSLGADLAI-DYTKEN----IEDLPEKFDVV  218 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~---~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~~~~dvv  218 (310)
                      +++...+|+|+| +|++|..++.++....+.   ++++++....+.+..+.+|...+. .-+..+    .....++.|+|
T Consensus         9 ~~~~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A            9 KILFKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CBCCCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             eecCCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence            455667899999 999999999877654444   688888776665556666653332 112221    22222234999


Q ss_pred             EeCCC---ChHHHHhhcccCCEEEEEeC
Q 021628          219 FDAVG---QCDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       219 i~~~g---~~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+++.   +...+-.|+..|-.++....
T Consensus        88 IN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           88 IDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             EECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             EECCccccCHHHHHHHHHcCCCEEECCC
Confidence            99874   23445567777888887764

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=93.95  E-value=0.44  Score=40.99  Aligned_cols=109  Identities=14%  Similarity=0.139  Sum_probs=67.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCccccc--CCCccEEEeCCCC---h
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ---C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~dvvi~~~g~---~  225 (310)
                      +|.|+| .|.+|...+..++...+.+++.+ ++++++.+.+ ++++...++.    ++.+.  ...+|+|+.|++.   .
T Consensus         7 ~igiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~----~~~~ll~~~~~D~V~i~tp~~~h~   81 (330)
T 3e9m_A            7 RYGIMS-TAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYG----SYEELCKDETIDIIYIPTYNQGHY   81 (330)
T ss_dssp             EEEECS-CCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBS----SHHHHHHCTTCSEEEECCCGGGHH
T ss_pred             EEEEEC-chHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeC----CHHHHhcCCCCCEEEEcCCCHHHH
Confidence            689999 89999887776665446677754 5677776655 5677532221    22222  2378999999873   3


Q ss_pred             HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          226 DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      +.+..++..+ +-+.+..+.         ....+..+++.++.++......
T Consensus        82 ~~~~~al~~g-k~vl~EKP~---------~~~~~e~~~l~~~a~~~g~~~~  122 (330)
T 3e9m_A           82 SAAKLALSQG-KPVLLEKPF---------TLNAAEAEELFAIAQEQGVFLM  122 (330)
T ss_dssp             HHHHHHHHTT-CCEEECSSC---------CSSHHHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHCC-CeEEEeCCC---------CCCHHHHHHHHHHHHHcCCeEE
Confidence            5566666655 444453321         1234667777777777666554

>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}

Probab=93.95  E-value=0.21  Score=39.42  Aligned_cols=93  Identities=15%  Similarity=0.105  Sum_probs=58.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC-EEeeCCCCcccccCCCccEEEeC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD-LAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      ...++.+||=+| +| .|..+..++... +.+++.++.+++..+.+++.    +.. .+...+-.......+.+|+|+..
T Consensus        20 ~~~~~~~vLDiG-cG-~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~   96 (209)
T 2p8j_A           20 ESNLDKTVLDCG-AG-GDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSY   96 (209)
T ss_dssp             HSSSCSEEEEES-CC-SSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEEC
T ss_pred             ccCCCCEEEEEC-CC-CCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEc
Confidence            456789999998 55 455544444553 88999999999887777542    211 12222222222223469999865


Q ss_pred             CC--C---------hHHHHhhcccCCEEEEEe
Q 021628          222 VG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       222 ~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      ..  .         +..+.+.|+|+|+++...
T Consensus        97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  128 (209)
T 2p8j_A           97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINF  128 (209)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            21  1         256778999999998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=93.95  E-value=0.1  Score=44.27  Aligned_cols=42  Identities=26%  Similarity=0.484  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .+.+++|+|++|.+|.+.+..+... |++|+++++++++.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~-G~~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSA   58 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            4689999999999999988877764 99999999988776544

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=93.95  E-value=0.8  Score=39.54  Aligned_cols=110  Identities=19%  Similarity=0.191  Sum_probs=64.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEE-EecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDK  227 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~  227 (310)
                      +|.|+| .|.+|...+..++...+.+++. .++++++.+.+ ++++...++..-++.+.  ...+|+|+.|++.   .+.
T Consensus         4 rvgiIG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~~D~V~i~tp~~~h~~~   80 (344)
T 3ezy_A            4 RIGVIG-LGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIE--DPNVDAVLVCSSTNTHSEL   80 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHH--CTTCCEEEECSCGGGHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhc--CCCCCEEEEcCCCcchHHH
Confidence            688999 8999987666555433567774 46688876655 66776544432111111  2378999999874   355


Q ss_pred             HHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          228 ALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      +..++..+ +-+.+..+.         ....+...++.++.++.....
T Consensus        81 ~~~al~~g-k~v~~EKP~---------~~~~~e~~~l~~~a~~~g~~~  118 (344)
T 3ezy_A           81 VIACAKAK-KHVFCEKPL---------SLNLADVDRMIEETKKADVIL  118 (344)
T ss_dssp             HHHHHHTT-CEEEEESCS---------CSCHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHHhcC-CeEEEECCC---------CCCHHHHHHHHHHHHHhCCcE
Confidence            66666655 444554321         123345555556655544433

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=93.95  E-value=0.098  Score=42.59  Aligned_cols=95  Identities=17%  Similarity=0.240  Sum_probs=63.2

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCc-cccc---C-
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD---LAIDYTKEN-IEDL---P-  212 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~~---~-  212 (310)
                      ....++++||-+| +| .|..+..+++.+. +.+++.++.+++..+.+++    .|..   .+...+..+ ....   . 
T Consensus        68 ~~~~~~~~vLdiG-~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           68 ISLTGAKQVLEIG-VF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKP  145 (232)
T ss_dssp             HHHHTCCEEEEEC-CT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSS
T ss_pred             HHhcCCCEEEEec-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCC
Confidence            3445778999999 55 8999999998752 4689999999998877754    2432   122222111 1111   1 


Q ss_pred             -CCccEEEeCCC-C-----hHHHHhhcccCCEEEEEe
Q 021628          213 -EKFDVVFDAVG-Q-----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       213 -~~~dvvi~~~g-~-----~~~~~~~l~~~G~~v~~g  242 (310)
                       ..+|+||.... .     ++.+.+.|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             57999984432 2     478889999999998754

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=93.93  E-value=0.028  Score=48.48  Aligned_cols=103  Identities=18%  Similarity=0.342  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.+++++...     .......  ..++.+.....|+|+-+.+.     
T Consensus       139 ~g~tvGIIG-lG~IG~~vA~~l~~~-G~~V~~~dr~~~~~~-----~~~~~~~--~~~l~ell~~aDvV~l~lPlt~~T~  209 (324)
T 3hg7_A          139 KGRTLLILG-TGSIGQHIAHTGKHF-GMKVLGVSRSGRERA-----GFDQVYQ--LPALNKMLAQADVIVSVLPATRETH  209 (324)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCCT-----TCSEEEC--GGGHHHHHHTCSEEEECCCCCSSST
T ss_pred             ccceEEEEE-ECHHHHHHHHHHHhC-CCEEEEEcCChHHhh-----hhhcccc--cCCHHHHHhhCCEEEEeCCCCHHHH
Confidence            478999999 999999999999985 999999988764322     1122211  12333444578899887651     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                        + ...+..|+++..++.++.-            ..-+-+++.+.+.+|++
T Consensus       210 ~li~~~~l~~mk~gailIN~aRG------------~~vde~aL~~aL~~g~i  249 (324)
T 3hg7_A          210 HLFTASRFEHCKPGAILFNVGRG------------NAINEGDLLTALRTGKL  249 (324)
T ss_dssp             TSBCTTTTTCSCTTCEEEECSCG------------GGBCHHHHHHHHHTTSS
T ss_pred             HHhHHHHHhcCCCCcEEEECCCc------------hhhCHHHHHHHHHcCCc
Confidence              1 4567788888888888621            11223455556666666

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=93.92  E-value=0.91  Score=39.13  Aligned_cols=108  Identities=18%  Similarity=0.164  Sum_probs=65.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEE-EEecChhhHHHH-HHcCCCEEeeCCCCcccccC--CCccEEEeCCCC---h
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLL-RSLGADLAIDYTKENIEDLP--EKFDVVFDAVGQ---C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~--~~~dvvi~~~g~---~  225 (310)
                      +|.|+| .|.+|...+..++...+.+++ +.++++++.+.+ +++|. ..+.    ++.+..  ..+|+|+.|++.   .
T Consensus         6 rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~~----~~~~~l~~~~~D~V~i~tp~~~h~   79 (344)
T 3euw_A            6 RIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAVA----SPDEVFARDDIDGIVIGSPTSTHV   79 (344)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEES----SHHHHTTCSCCCEEEECSCGGGHH
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-ceeC----CHHHHhcCCCCCEEEEeCCchhhH
Confidence            689999 899998877766553366777 456688876665 56773 2332    223322  378999999873   3


Q ss_pred             HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          226 DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      +.+..++..+ +-+.+..+.         ....+...++.++.++......
T Consensus        80 ~~~~~al~~g-k~v~~EKP~---------~~~~~~~~~l~~~a~~~g~~~~  120 (344)
T 3euw_A           80 DLITRAVERG-IPALCEKPI---------DLDIEMVRACKEKIGDGASKVM  120 (344)
T ss_dssp             HHHHHHHHTT-CCEEECSCS---------CSCHHHHHHHHHHHGGGGGGEE
T ss_pred             HHHHHHHHcC-CcEEEECCC---------CCCHHHHHHHHHHHHhcCCeEE
Confidence            5566666554 444554321         1233555566666665554443

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=93.92  E-value=0.39  Score=38.73  Aligned_cols=96  Identities=11%  Similarity=0.200  Sum_probs=63.4

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC--EE--eeCCCCcc-ccc-CC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD--LA--IDYTKENI-EDL-PE  213 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~--~~--~~~~~~~~-~~~-~~  213 (310)
                      ..+.+++.+||-+|  .+.|..+..+++.+. +.+++.++.+++..+.+++    .|..  .+  +..+..+. ... .+
T Consensus        51 ~~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~  128 (221)
T 3dr5_A           51 TTNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLAND  128 (221)
T ss_dssp             HSCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTT
T ss_pred             hhCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCC
Confidence            34555667999998  456888888888742 5789999999998777743    3432  22  22221111 122 35


Q ss_pred             CccEEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628          214 KFDVVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       214 ~~dvvi~~~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .||+||-...  .    ++.+++.|+|||.++.-.
T Consensus       129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence            7999986543  2    368889999999998654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=93.89  E-value=0.12  Score=43.04  Aligned_cols=73  Identities=18%  Similarity=0.216  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe-cChhhHHHH----HHcCCC-EEeeCCCCccccc----------CC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT-SSTAKLDLL----RSLGAD-LAIDYTKENIEDL----------PE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~-~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~----------~~  213 (310)
                      .+.+++|+|+++++|.+.+..+... |++|++.. +++++.+..    ++.+.. .++..+-.+..+.          ..
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~-G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAAD-GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999988877664 99997765 565554433    233332 2222221111111          13


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus       104 ~id~li~nAg  113 (267)
T 4iiu_A          104 AWYGVVSNAG  113 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CccEEEECCC
Confidence            7899999886

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=93.87  E-value=0.29  Score=41.89  Aligned_cols=91  Identities=13%  Similarity=0.164  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCC-CEEeeCCCCcccccCCCccEEEeCCCCh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQC  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g~~  225 (310)
                      ....+|.|+| +|.+|...+..+...++. +|.+.++++++.+.+ ++++. -...    .+..+..+++|+|+.|+++.
T Consensus       133 ~~~~~igiIG-~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~----~~~~e~v~~aDiVi~atp~~  207 (312)
T 2i99_A          133 PSSEVLCILG-AGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVC----SSVQEAVAGADVIITVTLAT  207 (312)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEEC----SSHHHHHTTCSEEEECCCCS
T ss_pred             CCCcEEEEEC-CcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEe----CCHHHHHhcCCEEEEEeCCC
Confidence            4567899999 899998877655443365 788889998887766 44552 1111    12233345789999998753


Q ss_pred             HHHH--hhcccCCEEEEEeCC
Q 021628          226 DKAL--KAVKEGGRVVSIIGS  244 (310)
Q Consensus       226 ~~~~--~~l~~~G~~v~~g~~  244 (310)
                      ...+  ..++++-.++.++..
T Consensus       208 ~~v~~~~~l~~g~~vi~~g~~  228 (312)
T 2i99_A          208 EPILFGEWVKPGAHINAVGAS  228 (312)
T ss_dssp             SCCBCGGGSCTTCEEEECCCC
T ss_pred             CcccCHHHcCCCcEEEeCCCC
Confidence            2222  577787777776644

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=93.87  E-value=0.63  Score=37.11  Aligned_cols=94  Identities=24%  Similarity=0.297  Sum_probs=59.3

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH----HHHcCCCEEeeCCCCcc---cccCCCccEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL----LRSLGADLAIDYTKENI---EDLPEKFDVV  218 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~----~~~~g~~~~~~~~~~~~---~~~~~~~dvv  218 (310)
                      ..+++|++||=+| +| .|..+..+++...+.+|+.++.+++..+.    +++..--..+..+....   ....+.+|+|
T Consensus        53 ~~~~~g~~VLDlG-cG-tG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V  130 (210)
T 1nt2_A           53 LKLRGDERVLYLG-AA-SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLI  130 (210)
T ss_dssp             CCCCSSCEEEEET-CT-TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred             cCCCCCCEEEEEC-Cc-CCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEE
Confidence            5678999999998 44 57788888887423579999999875432    33332111121211111   1123579999


Q ss_pred             EeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          219 FDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       219 i~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      +.....       +.++.+.|+|||+++..
T Consensus       131 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          131 YQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            876531       25677899999999876

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=93.86  E-value=0.033  Score=49.03  Aligned_cols=73  Identities=19%  Similarity=0.236  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+|+|+|++|.+|...+..+... |.+|+++++++.+.......+...+ .+..+ +.+....+++|+||++++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHC-CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence            3568999999999999988877774 8999999987654322211122221 12211 112222358999999976

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	310
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	1e-23
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-23
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	7e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-22
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	4e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	5e-20
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	7e-20
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	5e-18
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	7e-18
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	8e-18
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-17
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	4e-17
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-17
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	9e-17
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-16
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	6e-15
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-14
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-14
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-13
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-13
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-13
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	8e-13
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	1e-12
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-12
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	4e-12
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	7e-12
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	8e-12
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-11
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	3e-11
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	4e-11
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	5e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	1e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	4e-09
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	5e-09
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-09
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-08
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	3e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	4e-08
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	4e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	5e-08
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	6e-08
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-07
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-07
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-07
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	7e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-06
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-06
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-06
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	1e-06
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	3e-06
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	5e-06
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-05
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	3e-04
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	0.003
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 92.6 bits (229), Expect = 1e-23
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +A+V  +          +T + +  L E  VL++V  +++N  D    L +        
Sbjct: 4   FQAFVVNKTETEF-TAGVQT-ISMDDLPEGDVLVRVHYSSVNYKD---GLASIPDGKIVK 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                  +      V SQ  +F+ GDEV     E         G  +EY  +    L   
Sbjct: 59  TYPFVPGIDLAGVVVSSQHPRFREGDEVIATGYE---IGVTHFGGYSEYARLHGEWLVPL 115

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
           PK L    A  + LA               G++++ L 
Sbjct: 116 PKGLER-IAQEISLAELPQALKRILRGELRGRTVVRLA 152

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 91.5 bits (226), Expect = 4e-23
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +A   ++  +    +  +T +    L +D VLIKV  +    I++K  L   +  +   
Sbjct: 4   FQALQAEKNADD-VSVHVKT-ISTEDLPKDGVLIKVAYSG---INYKDGLAGKAGGNIVR 58

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                  +      V S   +F  GDEV     E  +        L+EY +V  + L   
Sbjct: 59  EYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDG---GLSEYASVPGDWLVPL 115

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
           P+NLS  EA    L T    E        A K IL     G V   +++L
Sbjct: 116 PQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQGRV---IVKL 162

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 91.2 bits (225), Expect = 7e-23
 Identities = 37/179 (20%), Positives = 62/179 (34%), Gaps = 26/179 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP- 59
           + A +YK     Q+ L+ E    +P  +ED+VL+++    +   D         A     
Sbjct: 3   LSAVLYK-----QNDLRLEQ-RPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVK 56

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRN---------------- 103
            P + G++ +G V KVG  VK  K GD V  +                            
Sbjct: 57  DPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP 116

Query: 104 ---GSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGG 159
              G+LA Y     +     P N +  +  +     E   +  E +   A  +I V+  
Sbjct: 117 PDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 89.6 bits (221), Expect = 2e-22
 Identities = 45/176 (25%), Positives = 66/176 (37%), Gaps = 25/176 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V   YG   + L+ E  V+VP     QVL+K+ A+ +   D     G +       
Sbjct: 6   MKAAVVHAYG---APLRIEE-VKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL- 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDH-------------------PK 101
           P IPG++  G V  VGS V + K GD V       A                        
Sbjct: 61  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 120

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157
            NG  AEY   + N + + PKN+                + + R+    G+ +L +
Sbjct: 121 VNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-RAGQIEGRIVLEM 175

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 22/170 (12%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           M+A    E+G  + VLK  +++ VP  ++ QVLIKV A  +NP++     G + +    L
Sbjct: 3   MRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTY-SRKPLL 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P  PG DVAGV+E VG     FK GD V+             +G  AEY    ++ +   
Sbjct: 61  PYTPGSDVAGVIEAVGDNASAFKKGDRVF--------TSSTISGGYAEYALAADHTVYKL 112

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQL 170
           P+ L  V  +  PL                     ++ G+G  G M++ L
Sbjct: 113 PEKLKPVIGSQYPLEKVAEAHE------------NIIHGSGATGKMILLL 150

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 5e-20
 Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 46/197 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E G     L  E  +EV   +  +V IK++A A+   D   + GA      P+
Sbjct: 7   CKAAVAWEAGKP---LSIEE-IEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
               G+  AG+VE VG  V K K GD V                                
Sbjct: 63  I--LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 89  -------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + H     + +EYT V +  +A     +   E  +  L+ +   +
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 142 GLER-SAFSAGKSILVL 157
             E   +  + ++++ +
Sbjct: 181 AFELMHSGKSIRTVVKI 197

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 83.1 bits (204), Expect = 7e-20
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 30/181 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF------S 54
           M+A    E G     L  +  + VP  +  QVLIKV AA +   D     G F       
Sbjct: 1   MRAVRLVEIGKP---LSLQE-IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVE 56

Query: 55  ATDSPLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPK------------- 101
                LP   G+++AG +E+VG +V  +  GD V  +  +   +                
Sbjct: 57  DLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 102 -----RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLAT-ETAYEGLERSAFSAGKSIL 155
                 +G+ AEY  V       K + +  +   ++ L     A + LE    + G+ +L
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLEN-FKAIGRQVL 175

Query: 156 V 156
           +
Sbjct: 176 I 176

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 5e-18
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 27/182 (14%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFK-RMLGAFSATDSP 59
             + V    G     L+ E N  +P    ++VL+++ +  +   D      G        
Sbjct: 8   NLSLVVHGPG----DLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVK 62

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG-------------------DINEKALDHP 100
            P + G++ +G VEKVGS VK  K GD V                       +      P
Sbjct: 63  KPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP 122

Query: 101 KRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA 160
             +G+L  +           P N+  +     PL    A E  E      G  I++    
Sbjct: 123 PDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE--KALEAFETFKKGLGLKIMLKCDP 180

Query: 161 GG 162
             
Sbjct: 181 SD 182

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 77.3 bits (189), Expect = 7e-18
 Identities = 42/177 (23%), Positives = 64/177 (36%), Gaps = 27/177 (15%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKA V +++      LK +  VE P++   +VL+++ A  +   D              L
Sbjct: 1   MKAAVVEQFK---EPLKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAA-HGDWPVKPKL 55

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------YGDINEKALDHPK 101
           P IPG++  G+VE+VG  V   KVGD V                         +      
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG 158
            +G  AEY     + +   P N    E   L    E     L+      G+ +L L 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNTII-EVQPLEKINEVFDRMLK--GQINGRVVLTLE 169

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 77.5 bits (189), Expect = 8e-18
 Identities = 22/173 (12%), Positives = 58/173 (33%), Gaps = 6/173 (3%)

Query: 1   MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSP 59
            +A +Y ++G  + VL  ++  ++  +L  ++V++K + + +NP D  ++ G + +  + 
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 60  LPTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLAL 119
                  + A      G         +    +  +  +      G+   +    ++    
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 120 KPKNLSFVEAASLPLATETAYEGL--ERSAFSAGKSILVLGGA-GGVGTMVIQ 169
            P        A+      T  + +            +   G A    G  +I 
Sbjct: 124 LPNP--AQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 76.5 bits (187), Expect = 1e-17
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 8/139 (5%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           ++A + ++    +++   +T ++   L E  V + V  ++LN  D    +          
Sbjct: 1   LQALLLEQQD-GKTLASVQT-LDESRLPEGDVTVDVHWSSLNYKDA-LAITGKGKIIRNF 57

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
           P IPG D AG V    S+  +F  G EV   +           G LAE   V+ + L   
Sbjct: 58  PMIPGIDFAGTVRT--SEDPRFHAGQEV---LLTGWGVGENHWGGLAEQARVKGDWLVAM 112

Query: 121 PKNLSFVEAASLPLATETA 139
           P+  +  E +         
Sbjct: 113 PQGQAAKEISLSEAPNFAE 131

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 74.1 bits (181), Expect = 4e-17
 Identities = 37/157 (23%), Positives = 52/157 (33%), Gaps = 26/157 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MKAWV K  G    +     ++  P   E +V+++V A  LN  D    LGA+     P 
Sbjct: 1   MKAWVLKRLGGPLEL----VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPP 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALK 120
                          G +V     G      +           G LAE  AV +  L   
Sbjct: 57  FIP------------GMEVVGVVEGRRYAALVP---------QGGLAERVAVPKGALLPL 95

Query: 121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL 157
           P+    V         E A+  L       GK ++ L
Sbjct: 96  PEGRPVVGPVFPFAEAEAAFRALLDRG-HTGKVVVRL 131

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.3 bits (184), Expect = 7e-17
 Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 31/183 (16%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            +    + + + ++  K +   +     +  + IK+ A  +   D     G +   +  +
Sbjct: 7   FEGIAIQSHEDWKNPKKTK--YDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKM 62

Query: 61  PTIPGYDVAGVVEKVGSQVKK-FKVGD--------------------------EVYGDIN 93
           P + G+++ G V K+G +     KVG                           +     +
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 94  EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKS 153
           +   D     G  A Y  V E+ +   P+N+              A+E +E+       +
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFT 182

Query: 154 ILV 156
           ++ 
Sbjct: 183 LVG 185

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 75.0 bits (183), Expect = 9e-17
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 46/197 (23%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E       L  E  +EV     +++ IK++A  +   D   +           
Sbjct: 9   CKAAVAWEANKP---LVIEE-IEVDVPHANEIRIKIIATGVCHTDLYHL--FEGKHKDGF 62

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYG------------------------------ 90
           P + G++ AG+VE VG  V +F+ G++V                                
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 91  ---------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        + +       + ++YT V +  +A    ++   E  +  +  E+  +
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182

Query: 142 GLERSA-FSAGKSILVL 157
            ++        +++L L
Sbjct: 183 AIDLMKHGKCIRTVLSL 199

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 42/201 (20%), Positives = 67/201 (33%), Gaps = 52/201 (25%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA +  + G+    L  E  +EV   +  +V I+V+A  + P D         A     
Sbjct: 9   CKAAIAWKTGSP---LCIEE-IEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF--- 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYG------------------------------ 90
           P + G++ AG+VE VG  V  FK GD+V                                
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 91  -------------DINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATE 137
                            +++ H     S ++YT V E  LA            +  L  E
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFE 181

Query: 138 TAYEGLERSAFSAGKSILVLG 158
           +  + ++      GKSI  + 
Sbjct: 182 SINDAID--LMKEGKSIRTIL 200

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 70.0 bits (170), Expect = 6e-15
 Identities = 34/224 (15%), Positives = 60/224 (26%), Gaps = 73/224 (32%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           + A V    G      + +  +++   + D+VL+KVVA  +   D       +     PL
Sbjct: 4   IIAAVTPCKGAD---FELQA-LKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY---PVPL 56

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P + G++ +G++E +G  V + +VGD V                                
Sbjct: 57  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 116

Query: 89  --------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY 140
                            DH     S A Y    EN      K+  F +            
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLV---------- 166

Query: 141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
                                 +    I   K +     +   +
Sbjct: 167 ---------------KFYAFDEINQAAIDSRKGI-TLKPIIKIA 194

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 68.8 bits (167), Expect = 1e-14
 Identities = 33/207 (15%), Positives = 49/207 (23%), Gaps = 37/207 (17%)

Query: 1   MKAWVYKEYGNS--QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
            +  VY   G    Q +   +         E  V++KVV+  +   D   + G  +A   
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 59  ---------------PLPTIPGYDVAGVVE-----------KVGSQVKKFKVGDEVYGDI 92
                                       V            K         V     G  
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 93  NEKALDHPKRNGSLAEYTAV--EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSA 150
                      G  AEY  V   +  L   P     +E  ++          L+ +    
Sbjct: 122 YGYVDMGDWTGG-QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAPRGY 180

Query: 151 GKSILVLGGAGGVGTMVIQLAKHVFGA 177
           G+       AG     VI   K  F A
Sbjct: 181 GE-----FDAGVPKKFVIDPHKT-FSA 201

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 68.1 bits (165), Expect = 3e-14
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 40/189 (21%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           L+  + A++ +   TAY  L      + GK   +  G              +   + ++ 
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 183 TSSTAKLDLL----RSLGADLAIDYTKENIEDLPEKF-----------DVVFDAVG--QC 225
                 LD +    + LGA   I   + N  +                 +  + VG    
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 226 DKALKAVKEGGRVVSIIGSVTPPASS--------------FVLTS--------DGSILEK 263
               + +   G +++  G    P +               F +T           S L +
Sbjct: 121 TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQ 180

Query: 264 LNPYFESGK 272
           +  ++E GK
Sbjct: 181 IIAWYEEGK 189

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 43/197 (21%), Positives = 65/197 (32%), Gaps = 48/197 (24%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E          E  VEV   +  +V IK+VA  +   D   + G       PL
Sbjct: 9   CKAAVLWEEKKP---FSIEE-VEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PL 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINE-------------------------- 94
           P I G++ AG+VE +G  V   + GD+V                                
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 95  -------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + H     + ++YT V+E  +A      +     +  L  E   E
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINE 181

Query: 142 GLERSAFSAGKSILVLG 158
           G       +G+SI  + 
Sbjct: 182 GF--DLLRSGESIRTIL 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 66.1 bits (160), Expect = 1e-13
 Identities = 38/206 (18%), Positives = 61/206 (29%), Gaps = 56/206 (27%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
            KA V  E       L  ET + V   +  +V IK++A+ +   D   +        S  
Sbjct: 9   CKAAVAWEPHKP---LSLET-ITVAPPKAHEVRIKILASGICGSDSSVL---KEIIPSKF 61

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV-------------------------------- 88
           P I G++  GVVE +G+ V   K GD+V                                
Sbjct: 62  PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG 121

Query: 89  -------YGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE 141
                        K + +     +  EYT V +  +A     ++                
Sbjct: 122 LMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKIN---------VNFLVST 172

Query: 142 GLERSAFSAGKSILVLGGAGGVGTMV 167
            L     +    +L   G G    M+
Sbjct: 173 KLTLDQINKAFELLSS-GQGVRSIMI 197

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 123 NLSFVEAASLPLATETAYEGLERSAFS-AGKSILVLGGAGGVGTMVIQLAKHVFGASKVA 181
               VE A L  A  TAY  ++++A +    + + + G GG+G + +QL K +  A+ +A
Sbjct: 3   REKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIA 62

Query: 182 ATSSTAKLDLLRSLGADLAIDYTKENIEDL-----PEKFDVVFDAVG---QCDKALKAVK 233
                 KL L   LGAD  +D  ++ ++ +         +V  D VG     D     + 
Sbjct: 63  LDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG 122

Query: 234 EGGRVVSI 241
             GR++ +
Sbjct: 123 RMGRLIIV 130

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 63.5 bits (153), Expect = 8e-13
 Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 43/195 (22%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           MK +           L +    E P       +++ +A +    D   +     A     
Sbjct: 1   MKGFAMLGINK----LGWIE-KERPVAGSYDAIVRPLAVSPCTSDIHTV--FEGALGDRK 53

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALD---------------------H 99
             I G++  G V +VGS+VK FK GD V                                
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFS 113

Query: 100 PKRNGSLAEYTAV---EENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             ++G   EY  V   + NL  L PK++   +  +        Y G +       +++L+
Sbjct: 114 NFKDGVFGEYFHVNDADMNLAIL-PKDVDLSKLVT------HVYHGFDH----IEEALLL 162

Query: 157 LGGAGGVGTMVIQLA 171
           +        +   + 
Sbjct: 163 M-KDKPKDLIKAVVI 176

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 62.8 bits (151), Expect = 1e-12
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 25/175 (14%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLR-EDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           KA    EY      L+ E +V+ P L     V++++  A +   D   + G +     P 
Sbjct: 1   KAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPK 56

Query: 61  PTIPGYDVAGV-VEKVGSQVKKFKVGDEVYGDINEKALDHP------------------K 101
                       +E+V   V+  + GD V                               
Sbjct: 57  LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN 116

Query: 102 RNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILV 156
            +G  AE+       +   PK++                E LE+     G+++L+
Sbjct: 117 IDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK-GEVLGRAVLI 170

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 26/190 (13%), Positives = 60/190 (31%), Gaps = 47/190 (24%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
             A V +++      L ++   E+  +    +L+++++A +   D     G       P+
Sbjct: 5   AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPI 60

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGD---------------------------------E 87
                ++ AG V +V  + +                                       +
Sbjct: 61  ILG--HEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 118

Query: 88  VYGDINEKALDHPKRNGSLAEYTAV-EENLLALKPKNLSFVEAASLPLATETAYEGLERS 146
           VYG IN    ++P   G  + +  +  E  +    + ++       PL    A + LE  
Sbjct: 119 VYG-INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL----PLKE--ANKALELM 171

Query: 147 AFSAGKSILV 156
                  +++
Sbjct: 172 ESREALKVIL 181

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 61.3 bits (147), Expect = 4e-12
 Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           L+ VEAA L  +  T Y  + +++    K++LV+G  GG+GTM +Q+AK V GA+ +   
Sbjct: 1   LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVGQCDKALKAVKE 234
                ++  +  GAD  I+ + ++      +            + ++        KA+ +
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 235 GGRVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGK 272
            G+ V +                  +   GS+         +    E+GK
Sbjct: 121 QGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 60.0 bits (144), Expect = 7e-12
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 14/157 (8%)

Query: 2   KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLP 61
               + ++G    VL+           E+++ ++  A  +N ID     G +      LP
Sbjct: 2   TRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLP 57

Query: 62  TIPGYDVAGVVEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKP 121
           +  G + AG+V KVGS VK  K GD V               G+ +    +  +  A+ P
Sbjct: 58  SGLGTEAAGIVSKVGSGVKHIKAGDRVVY--------AQSALGAYSSVHNIIADKAAILP 109

Query: 122 KNL--SFVEAASLPLATETAYEGLERSAFSAGKSILV 156
             +     E    PL        +  S  + G S+L+
Sbjct: 110 AAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 61.0 bits (147), Expect = 8e-12
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 26/150 (17%)

Query: 128 EAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
           +   L     T Y G   +    G ++ V  GAG VG      A+ +  A  +    + A
Sbjct: 3   DLTCLSDILPTGYHGAVTAGVGPGSTVYVA-GAGPVGLAAAASARLLGAAVVIVGDLNPA 61

Query: 188 KLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVG------------------ 223
           +L   ++ G ++A       + +         + D   DAVG                  
Sbjct: 62  RLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 224 QCDKALKAVKEGGRVVSIIGSVTPPASSFV 253
             +  ++  +  G++  I G         V
Sbjct: 122 VLNSLMQVTRVAGKIG-IPGLYVTEDPGAV 150

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 60.3 bits (145), Expect = 1e-11
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 11/128 (8%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L+  EA ++  A  TA   +    E         +LV G  GGVG++ + +     G + 
Sbjct: 1   LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK-RGYTV 59

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPE----KFDVVFDAVG--QCDKALKAVK 233
            A+T   A+ D LR LGA   +       E +      ++    D VG       L  ++
Sbjct: 60  EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMR 119

Query: 234 EGGRVVSI 241
            GG V   
Sbjct: 120 YGGAVAVS 127

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 56.9 bits (137), Expect = 2e-11
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L   +A  +  A  TA   +    +         I+V G +GGVG+  + L     G   
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK-LGYQV 59

Query: 180 VAATSSTAKLDLLRSLGA 197
           VA +   +  + L+SLGA
Sbjct: 60  VAVSGRESTHEYLKSLGA 77

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 59.2 bits (142), Expect = 3e-11
 Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 29/176 (16%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +    A  +     T + G E +    G S++V+ G G VG M I  AK       +   
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVI-GIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG---QCDKALKAVKE 234
           S    ++  +  GA   ++Y   +IED        +  D V  A G      +A+K VK 
Sbjct: 60  SRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 235 GGRVVSIIGSVTPPASSFV-----------LTSDGSI-------LEKLNPYFESGK 272
           GG +   I       +  +            T  G +        E+L       +
Sbjct: 120 GGIIS-NINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR 174

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 58.5 bits (140), Expect = 4e-11
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           +SF +AA+  L   T Y  L ++      +  L    AGGVG +  Q AK   GA  +  
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGT 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIEDL------PEKFDVVFDAVGQC--DKALKAVKE 234
             +  K       GA   I+Y +E++ +        +K  VV+D+VG+   +++L  ++ 
Sbjct: 60  VGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQR 119

Query: 235 GGR 237
            G 
Sbjct: 120 RGL 122

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (139), Expect = 5e-11
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
                 A L  A  T Y  L       GK + V+ G GG+G M I+   H  GA  VA T
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVV-GIGGLGHMGIK-LAHAMGAHVVAFT 61

Query: 184 SSTAKLDLLRSLGADLAIDYTKEN-IEDLPEKFDVVFDAV---GQCDKALKAVKEGGRVV 239
           +S AK +  ++LGAD  ++    + +    + FD + + V      D     +K  G + 
Sbjct: 62  TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

Query: 240 SI 241
            +
Sbjct: 122 LV 123

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 1e-09
 Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 26/172 (15%)

Query: 125 SFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +F E A + PL+         R   + G  +LV  GAG +G + + +AK +  A  V   
Sbjct: 2   TFEEGALIEPLSV--GIHACRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD 58

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIED--------LPEKFDVVFDAVG---QCDKALKAV 232
            S  +L   + +GADL +  +KE+ ++        L  K +V  +  G        + A 
Sbjct: 59  LSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYAT 118

Query: 233 KEGGRVVSII---GSVTPPASSFV---LTSDGSI-----LEKLNPYFESGKV 273
           + GG +V +       T P        +   G                S  V
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSV 170

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.8 bits (125), Expect = 4e-09
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           + F E A +  A  T Y+GL+++    G+ + +  G GG+G + +Q A+   G    A  
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAI-SGIGGLGHVAVQYARA-MGLHVAAID 58

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEK-------FDVVFDAVGQCDKALKAVKEGG 236
              AKL+L R LGA L ++  +E+  +  ++         V   +     +A+   + GG
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGG 118

Query: 237 RVVSII---GSVTPPASSFVL 254
            +  +    G    P    VL
Sbjct: 119 TIALVGLPPGDFPTPIFDVVL 139

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 52.7 bits (125), Expect = 5e-09
 Identities = 27/129 (20%), Positives = 42/129 (32%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   +     T Y    + A  + G +  V G  GGVG  VI   K    A  +    
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 185 STAKLDLLRSLGADLAIDYTKE-------NIEDLPEKFDVVFDAVG---QCDKALKAVKE 234
           +  K    + +GA   ++             E      D  F+ +G       AL   +E
Sbjct: 62  NKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 121

Query: 235 GGRVVSIIG 243
              V  I+G
Sbjct: 122 AYGVSVIVG 130

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 52.7 bits (125), Expect = 5e-09
 Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   L     T Y     +A    G    V G  G     VI   K    +  +    
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGL-AVIMGCKVAGASRIIGVDI 61

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQ---CDKALKAVKE 234
           +  K    +  GA   I+    +       IE      D  F+ +G       AL+A  +
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121

Query: 235 GGRVVSIIG 243
           G  V  ++G
Sbjct: 122 GWGVSVVVG 130

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.5 bits (122), Expect = 1e-08
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 138 TAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR 193
           TA   +    +        S+LV G  GGVG + + +     G   VA+T +    D L+
Sbjct: 7   TAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK-RGYDVVASTGNREAADYLK 65

Query: 194 SLGADLAIDYT----KENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP 247
            LGA   I               +++    D VG       L  ++ GG V     +   
Sbjct: 66  QLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG 125

Query: 248 P 248
            
Sbjct: 126 E 126

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 50.3 bits (119), Expect = 3e-08
 Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASK 179
           L   +A  +  A  TA   +    +         I+V G +GGVG+  + L     G   
Sbjct: 1   LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK-LGYQV 59

Query: 180 VAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEK--FDVVFDAVG--QCDKALKAVKEG 235
           VA +   +  + L+SLGA   +   +       EK  +    D VG     K L  +  G
Sbjct: 60  VAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYG 119

Query: 236 GRVVSIIG 243
           G V +   
Sbjct: 120 GCVAACGL 127

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 9/115 (7%)

Query: 127 VEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS 185
           +E+  +     T Y     +A  + G +  V G  GGVG   I   K    +  +   + 
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 186 TAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDKALKAVK 233
             K      LGA   ++    +        E      D   +  G+ +  + A++
Sbjct: 62  KDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQ 116

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.1 bits (118), Expect = 4e-08
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 1/119 (0%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           LS  EAA+ P++  TAY  L+R+    G+ +LV   AG +GT  +Q+A+ +      AA+
Sbjct: 1   LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 60

Query: 184 SSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC-DKALKAVKEGGRVVSI 241
                   L     + A               D+V +  G+  +++L  +  GGR+V I
Sbjct: 61  RPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYI 119

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.6 bits (117), Expect = 5e-08
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           +    AA L     T Y  L R+    GK + ++ G GG+G+M   ++K   GA     +
Sbjct: 1   IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIV-GLGGIGSMGTLISKA-MGAETYVIS 58

Query: 184 SSTAKLDLLRSLGADLAIDYTK--ENIEDLPEKFDVVFDAVG-----QCDKALKAVKEGG 236
            S+ K +    +GAD  I   +  +  E   + FD++            +   KA+K GG
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGG 118

Query: 237 RVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGKVK 274
           R+VSI         S        ++   S       L +L        +K
Sbjct: 119 RIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK 168

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 49.5 bits (117), Expect = 6e-08
 Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 7/106 (6%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           +       L    +T       +   +   S +   GAG VG   +  AK    +  +A 
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAV 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIED-----LPEKFDVVFDAVG 223
               ++L+L + LGA   I+   ++             +   ++ G
Sbjct: 60  DIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG 105

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 19/138 (13%), Positives = 38/138 (27%), Gaps = 12/138 (8%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
                 L     T +     +A    G +  V G        V+           +A   
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAK-RIIAVDL 61

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQ---CDKALKAVKE 234
           +  K +  +  GA   ++    +        +      D   + VG       AL++  +
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 235 GGRVVSIIGSVTPPASSF 252
           G  V  ++G       + 
Sbjct: 122 GWGVSVLVGWTDLHDVAT 139

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 32/180 (17%)

Query: 128 EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186
           EAA+  +A  TA+  L      S G+ +L+    GGVG   + +AK +       A S  
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 187 AKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVG--QCDKALKAVKEGGRV 238
            + ++L  LG +   D    +  D           DVV +++      + ++ +  GGR 
Sbjct: 62  KR-EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRF 120

Query: 239 VSIIGSVTPPASSFVLTSD----------------------GSILEKLNPYFESGKVKAI 276
           + +        +S  L +                         +L+ +  +   GK++ +
Sbjct: 121 IELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL 180

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 4e-07
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 34/170 (20%)

Query: 1   MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPL 60
           +KA            L+    +       + V I++    +   D  ++   +    +  
Sbjct: 1   IKAVGAYSAK---QPLEPMD-ITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW--AGTVY 54

Query: 61  PTIPGYDVAGVVEKVGSQVKKFKVGDEV--------------------------YGDINE 94
           P +PG+++ G V  VG QV+K+  GD V                           G  N 
Sbjct: 55  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 114

Query: 95  KALDHP-KRNGSLAEYTAV-EENLLALKPKNLSFVEAASLPLATETAYEG 142
              D P    G  ++   V E  +L ++  ++  + A  +  A E    G
Sbjct: 115 PTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 46.1 bits (108), Expect = 7e-07
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 19/140 (13%)

Query: 125 SFVEAASL-PLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           S  E A L PL+         R+    G ++LV  GAG +G + +  AK       V   
Sbjct: 2   SLEEGALLEPLSV--GVHACRRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGA-FVVCTA 57

Query: 184 SSTAKLDLLRSLGADLAIDYTKENI----------EDLPEKFDVVFDAVG---QCDKALK 230
            S  +L++ ++ GAD+ +                   + +  +V  D  G        + 
Sbjct: 58  RSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGIN 117

Query: 231 AVKEGGRVVSIIGSVTPPAS 250
             + GG ++ ++G  +   +
Sbjct: 118 ITRTGGTLM-LVGMGSQMVT 136

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 12/129 (9%)

Query: 126 FVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS 184
             +   +     T Y    ++     G + +V G  GGVG  VI   K    +  +    
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 185 STAKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDK---ALKAVKE 234
           +  K +   ++GA   I              E         F+ +G  +    AL +   
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 235 GGRVVSIIG 243
                 ++G
Sbjct: 123 NYGTSVVVG 131

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 45.9 bits (107), Expect = 1e-06
 Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 21/170 (12%)

Query: 124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT 183
           LSF EAA +  A  T Y+ L+ +    G+ + + G  G     V        G + VA  
Sbjct: 1   LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYA--KAMGLNVVAVD 58

Query: 184 SSTAKLDLLRSLGADLAIDYT-----KENIEDLPEKFDVVFDAVGQ--CDKALKAVKEGG 236
               KL+L + LGADL ++       K   E +      V  AV +     A  +++ GG
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGG 118

Query: 237 RVVSIIGSVTPPASSFV------LTSDGSI------LEKLNPYFESGKVK 274
             V +                  +   GSI      L++   +   GKVK
Sbjct: 119 ACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.7 bits (107), Expect = 1e-06
 Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 129 AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
            A    +  TAY   +      AGK++++ G AG +G   + +A+ +   + +    S  
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPN 64

Query: 188 KLDLLRSLGADLAIDYTKENIEDLPEK---------FDVVFDAVG---QCDKALKAVKEG 235
           +L L   +GADL ++  + ++E+  +           D + +A G      +  + ++ G
Sbjct: 65  RLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG 124

Query: 236 GRVVSIIGSVTPPAS 250
           G    + G   P   
Sbjct: 125 GFYS-VAGVAVPQDP 138

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 123 NLSFVEAASLPLATETAYEGL-ERSAFSAGK--SILVLGGAGGVGTMVIQLAKH 173
           +LS+   A + +   T+  G+ E+   SAG   +++V G AG  G++  Q+   
Sbjct: 1   HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHL 53

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 43.9 bits (103), Expect = 3e-06
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 12/92 (13%)

Query: 2  KAWVYKEYGN---SQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDS 58
          K+W  K++     +QS  + +T VE+P L+  +VL++ +  +++P               
Sbjct: 5  KSWTLKKHFQGKPTQSDFELKT-VELPPLKNGEVLLEALFLSVDPYMRIAS-----KRLK 58

Query: 59 PLPTIPGYDVAGVVEKVGSQVKKFKVGDEVYG 90
              + G  VA VVE   S+   F  G  V  
Sbjct: 59 EGAVMMGQQVARVVE---SKNSAFPAGSIVLA 87

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (102), Expect = 5e-06
 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 124 LSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAA 182
           L F + A++ +   TAY  L  SA   AG+S+LV G +GGVG    Q     +G   +  
Sbjct: 1   LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQ-IARAYGLKILGT 59

Query: 183 TSSTAKLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKE 234
             +     ++   GA    ++ + N  D        +  D++ + +      K L  +  
Sbjct: 60  AGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSH 119

Query: 235 GGRVVSI--IGSVTPPASSFVL 254
           GGRV+ +   G++       + 
Sbjct: 120 GGRVIVVGSRGTIEINPRDTMA 141

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 22/138 (15%), Positives = 43/138 (31%), Gaps = 12/138 (8%)

Query: 128 EAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST 186
               +     + Y     +A  + G +  V G  G VG   I   K    +  +A   + 
Sbjct: 5   RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING 63

Query: 187 AKLDLLRSLGADLAIDYTKEN-------IEDLPEKFDVVFDAVGQCDK---ALKAVKEGG 236
            K    ++LGA   ++  + +        E      D   D  G       A+     G 
Sbjct: 64  EKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGW 123

Query: 237 RVVSIIGSVTPPASSFVL 254
              +++G+     +   +
Sbjct: 124 GSCTVVGAKVDEMTIPTV 141

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)

Query: 129 AASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA 187
             ++ +   TAY GL        G+++LV   AG VG++V Q+AK   G   V A  S  
Sbjct: 7   LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKL-KGCKVVGAAGSDE 65

Query: 188 KLDLLRSLGADLAIDYTKENIED------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVV 239
           K+  L+ +G D A +Y   N  +       P+ +D  FD VG    +  L  +K+ G++ 
Sbjct: 66  KIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIA 125

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 38.1 bits (87), Expect = 7e-04
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 148 FSAGKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLA 200
           +    ++LV GG GGVG  +   LA+   GA  +   S S    D    L A+L 
Sbjct: 6   WKPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELE 58

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 36.4 bits (84), Expect = 0.003
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 150 AGKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKEN 207
           AGK +LV GGA G+G  +    A+   GA            ++  ++G     +D   E 
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDE- 60

Query: 208 IEDLPEKFDVVFDAVGQCD 226
             +     +    A+G+ D
Sbjct: 61  -RERVRFVEEAAYALGRVD 78

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 13/77 (16%)

Query: 151 GKSILVLGGAGGVG-TMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE 209
            K +LVL  + G+G  +   L++   GA +V   +     +LL+  G           + 
Sbjct: 4   DKGVLVLAASRGIGRAVADVLSQE--GA-EVTICARNE--ELLKRSGHRYV-------VC 51

Query: 210 DLPEKFDVVFDAVGQCD 226
           DL +  D++F+ V + D
Sbjct: 52  DLRKDLDLLFEKVKEVD 68

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	310
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.93
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.88
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.88
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.86
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.86
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.86
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.86
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.85
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.84
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.84
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.84
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.83
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.83
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.83
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.83
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.83
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.82
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.82
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.81
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.81
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.79
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.78
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.77
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.75
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.73
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.69
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.67
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.49
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.21
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.17
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.85
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.72
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.55
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.51
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.35
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.34
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.29
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.27
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.27
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.26
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.23
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.2
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.19
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.19
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.19
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.16
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.07
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.06
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.02
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.02
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.01
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.01
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.01
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.97
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.93
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.91
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.9
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.81
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.81
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.77
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.76
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.74
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.74
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.69
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.69
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.68
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.67
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.65
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.64
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.63
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.6
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.6
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.59
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.57
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.56
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.55
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.55
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.53
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.49
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.44
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.44
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.36
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.36
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.36
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.36
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.31
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.3
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.29
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.21
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.19
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.18
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.15
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.13
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.12
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.1
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.05
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.99
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.84
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.84
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.83
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.82
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.82
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.81
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	95.79
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.76
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	95.75
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.74
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.67
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.65
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	95.59
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.59
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.56
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.55
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.54
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.54
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.52
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.44
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.43
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.37
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.36
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.31
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.31
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.3
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.16
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.15
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.08
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.08
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.0
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.98
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.87
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.8
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	94.73
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.71
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.69
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.62
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.6
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.57
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.5
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.48
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.44
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.42
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.37
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.28
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	94.23
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	94.21
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.07
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.06
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.95
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.95
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	93.89
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.88
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.71
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.7
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	93.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.59
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.52
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	93.52
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.46
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.46
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.45
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.37
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.34
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.3
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.23
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.15
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.15
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.13
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.12
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.94
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	92.74
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.65
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.64
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.64
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.46
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.44
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.41
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	92.33
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	92.21
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.1
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.03
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	92.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.87
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.66
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.62
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	91.57
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.48
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	91.29
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.22
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	91.1
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.88
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.75
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	90.69
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.61
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.56
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.52
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.5
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.42
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	90.35
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.35
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.24
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	90.04
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.86
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.81
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	89.74
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.73
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	89.72
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.33
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	89.0
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	88.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	88.92
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	88.62
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.58
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	88.51
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	88.42
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	88.42
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	88.35
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.27
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	88.15
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	87.9
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.89
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.81
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	87.78
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.73
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	87.7
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	87.69
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.65
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	87.5
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	87.34
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.33
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.26
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.16
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	86.79
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.77
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	86.72
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.68
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	86.62
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.32
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	85.98
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	85.78
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.57
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.53
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	85.53
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.53
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.47
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	85.46
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.22
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.14
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.91
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	84.69
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	84.68
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.52
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	84.49
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	84.46
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.44
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.38
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	84.13
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	84.12
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.85
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	83.83
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	83.79
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.63
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	83.5
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	83.35
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	83.22
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	83.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	83.18
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	83.05
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	82.98
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.96
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.84
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	82.57
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	82.45
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.28
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	82.07
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	81.96
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.9
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	81.52
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	81.19
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.96
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	80.83
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	80.59
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	80.52
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.5
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	80.32

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-31  Score=205.16  Aligned_cols=147  Identities=35%  Similarity=0.522  Sum_probs=134.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++ ++|+++.+.|.|++++|||+||+.+++||++|++.++|.++. ...+|.++|||++|+|+++|++++
T Consensus         3 MkAv~~~~~G~p-~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           3 MRAVRVFEFGGP-EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEESSCSSG-GGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC-CCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             eeEEEEEccCCc-ceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc-cccccccCccceeeeeEeecceee
Confidence            999999999999 899987468999999999999999999999999999997753 356889999999999999999999


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVL  157 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~  157 (310)
                      +|++||||++..        ...|+|+||+.++.+.++++|+++++++||+++++.+|+++++ ..+...+|+++||+
T Consensus        81 ~~~vGdrV~~~~--------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          81 AFKKGDRVFTSS--------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCTTCEEEESC--------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccccCccccccc--------cccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999998864        2469999999999999999999999999999999999999988 57788999999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=6.4e-31  Score=209.39  Aligned_cols=155  Identities=21%  Similarity=0.267  Sum_probs=132.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |.++++.+++++    +++ |+|.|+++++||+||+.+++||++|++.+.+.. +......|.++|||++|+|+++|+++
T Consensus         2 ~maAVl~g~~~l----~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v   76 (178)
T d1e3ja1           2 NLSAVLYKQNDL----RLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   76 (178)
T ss_dssp             CEEEEEEETTEE----EEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             ceEEEEEcCCcE----EEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCccc
Confidence            445666676654    999 999999999999999999999999999887653 22345678999999999999999999


Q ss_pred             CCCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           80 KKFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      .++++||||+..+..                   ........+|+|+||+++|.+.++++|+++++++++.+++.+.|+|
T Consensus        77 ~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (178)
T d1e3ja1          77 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV  156 (178)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHH
T ss_pred             CCCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHH
Confidence            999999999875421                   0112234579999999999999999999999999999999999999


Q ss_pred             HHHHhcccCCCCEEEEEcCC
Q 021628          141 EGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~  160 (310)
                      ++++.+++++|++|+|+|++
T Consensus       157 ~a~~~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         157 DAFEAARKKADNTIKVMISC  176 (178)
T ss_dssp             HHHHHHHHCCTTCSEEEEEC
T ss_pred             HHHHHhCCCCCCEEEEEccc
Confidence            99999999999999999865

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.9e-29  Score=200.28  Aligned_cols=151  Identities=30%  Similarity=0.412  Sum_probs=130.6

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++   |+++ |.|.|.+++|||+||+.+++||++|++.++|.++ ....+|.++|||++|+|+++|++++
T Consensus         6 MkA~v~~~~g~p---l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~-~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           6 MKAAVVHAYGAP---LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP-VKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS-SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEEeCCCC---CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc-ccccCCcCCCCcceEEEEEeCCCcc
Confidence            999999999987   7899 9999999999999999999999999999999875 2356899999999999999999999


Q ss_pred             CCCCCCeeEeecC-------------------ccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDIN-------------------EKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||...+.                   +....+...+|+|+||++++...++++|++++++.++.+.+++.++++
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~  160 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILD  160 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHH
T ss_pred             ccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHH
Confidence            9999999976421                   111223445789999999999999999999999888888889999998


Q ss_pred             HHHhcccCCCCEEEEE
Q 021628          142 GLERSAFSAGKSILVL  157 (310)
Q Consensus       142 al~~~~~~~g~~vlI~  157 (310)
                      +++... .+|++|||+
T Consensus       161 ~~~~g~-~~G~~VLVl  175 (175)
T d1llua1         161 QMRAGQ-IEGRIVLEM  175 (175)
T ss_dssp             HHHTTC-CSSEEEEEC
T ss_pred             HHHhCC-CCCCEEEeC
Confidence            886554 469999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=2.8e-29  Score=198.17  Aligned_cols=150  Identities=22%  Similarity=0.341  Sum_probs=130.8

Q ss_pred             EEEEEcccCCCccceEEeccccCCCC-CCCcEEEEEeEeecCHHHHHHHhCCCCC-CCCCCCcccccceeEEEEEeCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSL-REDQVLIKVVAAALNPIDFKRMLGAFSA-TDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      ||+++.++|++   |+++ +++.|++ ++|||+||+.+++||++|++.+.|.++. ....+|.++|||++|+|+++|+++
T Consensus         1 kA~~~~~~g~p---l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v   76 (171)
T d1h2ba1           1 KAARLHEYNKP---LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   76 (171)
T ss_dssp             CEEEESSTTSC---CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CEEEEEeCCCC---CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCC
Confidence            79999999987   7999 9999986 6899999999999999999999887532 234679999999999999999999


Q ss_pred             CCCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           80 KKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      +++++||||+..+..                  ....+...+|+|+||+++|.+.++++|++++++.++++.+++.|+|+
T Consensus        77 ~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~  156 (171)
T d1h2ba1          77 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLE  156 (171)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHH
T ss_pred             CcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHH
Confidence            999999999875431                  11223345799999999999999999999999888888899999999


Q ss_pred             HHHhcccCCCCEEEE
Q 021628          142 GLERSAFSAGKSILV  156 (310)
Q Consensus       142 al~~~~~~~g~~vlI  156 (310)
                      +++.+.+ .|++|||
T Consensus       157 al~~~~~-~G~~VlI  170 (171)
T d1h2ba1         157 RLEKGEV-LGRAVLI  170 (171)
T ss_dssp             HHHTTCC-SSEEEEE
T ss_pred             HHHhcCC-CCCEEEe
Confidence            9988888 8999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.2e-29  Score=196.31  Aligned_cols=151  Identities=26%  Similarity=0.408  Sum_probs=124.9

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++   |+++ ++|.|++++|||+||+.+++||++|++.+++... ....+|.++|||++|+|+++|++++
T Consensus         1 MkA~v~~~~g~p---l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~-~~~~~p~v~GhE~~G~Vv~vG~~v~   75 (171)
T d1rjwa1           1 MKAAVVEQFKEP---LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP-VKPKLPLIPGHEGVGIVEEVGPGVT   75 (171)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS-SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEecCCCC---cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeecccc-cccccccccCCEEEEEEEEeccccc
Confidence            999999999987   7999 9999999999999999999999999999987543 3457899999999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHH
Q 021628           81 KFKVGDEVYGDINE-------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYE  141 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  141 (310)
                      ++++||||...+..                   ....+...+|+|+||+++|..+++++|++++++.|++ . .+.++++
T Consensus        76 ~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~l-~-~~~~~~~  153 (171)
T d1rjwa1          76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPL-E-KINEVFD  153 (171)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEEG-G-GHHHHHH
T ss_pred             CceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHHH-H-HHHHHHH
Confidence            99999999764321                   1112344579999999999999999999999865543 3 3446777


Q ss_pred             HHHhcccCCCCEEEEEcC
Q 021628          142 GLERSAFSAGKSILVLGG  159 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~  159 (310)
                      ++..+.+ +|++|||+|.
T Consensus       154 ~~~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         154 RMLKGQI-NGRVVLTLED  170 (171)
T ss_dssp             HHHTTCC-SSEEEEECCC
T ss_pred             HHHhcCC-CCCEEEEeCC
Confidence            7765555 5999999983

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.3e-28  Score=189.66  Aligned_cols=143  Identities=24%  Similarity=0.323  Sum_probs=126.9

Q ss_pred             EEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 021628            2 KAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVKK   81 (310)
Q Consensus         2 ka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~~   81 (310)
                      +.+.|.++|.+ +.|+++ +.+.|++++|||+||+.++++|++|++.+.|.++  ...+|.++|||++|+|+++|+++++
T Consensus         2 ~~i~~~~~G~p-e~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   77 (147)
T d1qora1           2 TRIEFHKHGGP-EVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYP--PPSLPSGLGTEAAGIVSKVGSGVKH   77 (147)
T ss_dssp             EEEEBSSCCSG-GGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC--CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             eEEEEcccCCC-ceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCCCC--CCcceeeeccccccceeeeeeeccc
Confidence            57889999999 999999 9999999999999999999999999999999874  4578999999999999999999999


Q ss_pred             CCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhh--ccccchHHHHHHHHHhcccCCCCEEEE
Q 021628           82 FKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEA--ASLPLATETAYEGLERSAFSAGKSILV  156 (310)
Q Consensus        82 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~al~~~~~~~g~~vlI  156 (310)
                      |++||||+...        ...|+|++|.+++.+.++++|++++++.+  +.+++...++++++...++++|++|||
T Consensus        78 ~~vGdrV~~~~--------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~G~~VLI  146 (147)
T d1qora1          78 IKAGDRVVYAQ--------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI  146 (147)
T ss_dssp             CCTTCEEEESC--------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEE
T ss_pred             ccccceeeeec--------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEe
Confidence            99999997643        23689999999999999999999887644  455677778888886678999999997

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.1e-28  Score=197.56  Aligned_cols=154  Identities=18%  Similarity=0.229  Sum_probs=130.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCC-
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQV-   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~-   79 (310)
                      ||++++..+++. ..++++ +.+.++++++||+||+.++|||++|++.+.|.++  ...+|+++|||++|+|+++|+++ 
T Consensus         7 ~ka~~~~~~~~~-~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~--~~~~P~i~GHE~~G~Vv~vG~~v~   82 (192)
T d1piwa1           7 FEGIAIQSHEDW-KNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG--NMKMPLVVGHEIVGKVVKLGPKSN   82 (192)
T ss_dssp             EEEEEECCSSST-TSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS--CCCSSEECCCCEEEEEEEECTTCC
T ss_pred             eEEEEEeCCCcC-CcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC--CCCCCcCcccccccchhhcccccc
Confidence            799999999887 777888 7777778999999999999999999999998764  45789999999999999999998 


Q ss_pred             CCCCCCCeeEeecCc--------------------------cccCCCCCCCcceeEEEEecCccccCCCCCChhhhcccc
Q 021628           80 KKFKVGDEVYGDINE--------------------------KALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~--------------------------~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (310)
                      ..+++||||...+..                          ....+...+|+|++|+++|...++++|++++++.|+.+.
T Consensus        83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~  162 (192)
T d1piwa1          83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGE  162 (192)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSH
T ss_pred             cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHH
Confidence            569999999643210                          111244467999999999999999999999998876665


Q ss_pred             chHHHHHHHHHhcccCCCCEEEEEc
Q 021628          134 LATETAYEGLERSAFSAGKSILVLG  158 (310)
Q Consensus       134 ~~~~ta~~al~~~~~~~g~~vlI~g  158 (310)
                      +++.|||++++.+.+++|++|++..
T Consensus       163 ~~~~ta~~~l~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         163 AGVHEAFERMEKGDVRYRFTLVGYD  187 (192)
T ss_dssp             HHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEEC
Confidence            5678999999999999999999863

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=6.8e-29  Score=200.75  Aligned_cols=151  Identities=21%  Similarity=0.293  Sum_probs=130.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   |+++ |++.|+|++|||+||+.++|+|++|++.+.+..+  +..+|.++|||++|+|+++|+++.
T Consensus         9 ~kAav~~~~~~p---l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~--~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           9 CKAAVAWEANKP---LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC--TTSCSEECCCCEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCC---cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhccc--ccccccccccccceEEEEEcCCCc
Confidence            579999999987   7999 9999999999999999999999999999999653  457899999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc-------------------CC--------------------CCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEKAL-------------------DH--------------------PKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~-------------------~~--------------------~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||+..+.....                   ..                    ....|+|+||+++|...++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            99999999775331000                   00                    0014899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHH-hcccCCCCEEEEE
Q 021628          122 KNLSFVEAASLPLATETAYEGLE-RSAFSAGKSILVL  157 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~  157 (310)
                      ++++++++|++.+++.|+++++. ....+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999995 5778899999984

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2e-28  Score=183.79  Aligned_cols=131  Identities=33%  Similarity=0.445  Sum_probs=118.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++|++   ++++ |.+.|++++|||+||+.+++||++|++.+.|.++. ...+|+++|||++|+|        
T Consensus         1 MkA~~~~~~G~~---l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~-~~~~P~v~G~E~~G~V--------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP---LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT-RLHPPFIPGMEVVGVV--------   67 (131)
T ss_dssp             CEEEEECSTTSC---EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS-CCCSSBCCCCEEEEEE--------
T ss_pred             CcEEEEccCCCC---CEEE-EccCCCCCCCEEEEEEEEEeccccccccccccccc-cccceeEeeeeeEEee--------
Confidence            999999999987   7999 99999999999999999999999999999998753 3478999999999999        


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEE
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVL  157 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~  157 (310)
                         +||+|+++..         .|+|+||++++.+.++++|+++++++||.+++.+.|||+++... -+.|++||++
T Consensus        68 ---vGd~V~~~~~---------~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~-g~~g~tvl~l  131 (131)
T d1iz0a1          68 ---EGRRYAALVP---------QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDR-GHTGKVVVRL  131 (131)
T ss_dssp             ---TTEEEEEECS---------SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCT-TCCBEEEEEC
T ss_pred             ---ccceEEEEec---------cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhc-ccCCCEEEEC
Confidence               3999998764         79999999999999999999999999999999999999999532 2569999874

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=3.4e-28  Score=195.95  Aligned_cols=151  Identities=27%  Similarity=0.304  Sum_probs=129.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++   |+++ ++|.|+|+++||+||+.++|||++|+++++|.++  ...+|.++|||++|+|+++|+++.
T Consensus         7 ~kAav~~~~g~~---l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~--~~~~p~v~GhE~~G~V~~vG~~V~   80 (197)
T d2fzwa1           7 CKAAVAWEAGKP---LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP--EGCFPVILGHLGAGIVESVGEGVT   80 (197)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT--TCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc--cccccccCCcceeeEEEeecCCce
Confidence            899999999987   8999 9999999999999999999999999999999763  457899999999999999999999


Q ss_pred             CCCCCCeeEeecCccc---------------------------------------cCCCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEKA---------------------------------------LDHPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~---------------------------------------~~~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      .+++||+|........                                       ..+....|+|+||+++|...++++|
T Consensus        81 ~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence            9999999986432100                                       0011124899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHh-cccCCCCEEEEE
Q 021628          122 KNLSFVEAASLPLATETAYEGLER-SAFSAGKSILVL  157 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~-~~~~~g~~vlI~  157 (310)
                      ++++.++++.+++++.|++.+++. ..-+.+++|||+
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999999854 344678898874

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.9e-28  Score=197.79  Aligned_cols=149  Identities=28%  Similarity=0.340  Sum_probs=127.3

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++   |+++ |+|.|+|+++||+||+.++|||++|++.++|.++   ..+|.++|||++|+|+++|++++
T Consensus         9 ~KAaV~~~~g~p---l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           9 CKAAIAWKTGSP---LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPKKK---ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeeecc---cccccccccccceEEeeecCCce
Confidence            899999999987   7999 9999999999999999999999999999999763   56799999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc-------------------------------------------CCCCCCCcceeEEEEecCcc
Q 021628           81 KFKVGDEVYGDINEKAL-------------------------------------------DHPKRNGSLAEYTAVEENLL  117 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~-------------------------------------------~~~~~~g~~~~~~~~~~~~~  117 (310)
                      ++++||||+..+.....                                           .+....|+|+||+++|...+
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            99999999875421000                                           01112489999999999999


Q ss_pred             ccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEc
Q 021628          118 ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (310)
Q Consensus       118 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (310)
                      +++|++++++.+++..+++.++++++..  +++|++|.|..
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEEE
Confidence            9999999999888888888888888754  46899987764

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=193.41  Aligned_cols=150  Identities=23%  Similarity=0.300  Sum_probs=125.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAF-SATDSPLPTIPGYDVAGVVEKVGSQV   79 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~~g~~~   79 (310)
                      |+|+++++++++    +++ |+|.|++++|||+||+.+++||++|++.+++.. +.....+|.++|||++|+|+++|+++
T Consensus         8 ~~a~V~~gp~~l----~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   82 (185)
T d1pl8a1           8 NLSLVVHGPGDL----RLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (185)
T ss_dssp             CEEEEEEETTEE----EEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             CEEEEEeCCCeE----EEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccce
Confidence            689999988765    999 999999999999999999999999999997643 22235678999999999999999999


Q ss_pred             CCCCCCCeeEeecCcc-------------------ccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHH
Q 021628           80 KKFKVGDEVYGDINEK-------------------ALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAY  140 (310)
Q Consensus        80 ~~~~~Gd~V~~~~~~~-------------------~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  140 (310)
                      .++++||||+..+...                   .......+|+|+||++++.++++++|+++++++++..+++  +++
T Consensus        83 ~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl~--~a~  160 (185)
T d1pl8a1          83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLE--KAL  160 (185)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEGG--GHH
T ss_pred             eeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHHH--HHH
Confidence            9999999998754211                   0122335689999999999999999999999998877654  477


Q ss_pred             HHHHhcccCCCCEEEEE
Q 021628          141 EGLERSAFSAGKSILVL  157 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~  157 (310)
                      ++++..+.++|++|+|.
T Consensus       161 ~a~~~~~~~~G~~VlIg  177 (185)
T d1pl8a1         161 EAFETFKKGLGLKIMLK  177 (185)
T ss_dssp             HHHHHHHTTCCSEEEEE
T ss_pred             HHHHHhCCCCCCEEEEE
Confidence            88888889999999983

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=1.4e-27  Score=189.81  Aligned_cols=150  Identities=27%  Similarity=0.339  Sum_probs=122.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCC------CCCCCCcccccceeEEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSA------TDSPLPTIPGYDVAGVVEK   74 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~   74 (310)
                      |||+++.++|++   |+++ |++.|++++|||+||+.+++||++|++.++|.++.      ....+|.++|||++|+|++
T Consensus         1 MKA~~~~~~G~p---l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~   76 (177)
T d1jvba1           1 MRAVRLVEIGKP---LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE   76 (177)
T ss_dssp             CEEEEECSTTSC---CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEE
T ss_pred             CeEEEEEeCCCC---CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEee
Confidence            999999999987   7999 99999999999999999999999999999987532      2346899999999999999


Q ss_pred             eCCCCCCCCCCCeeEeecCc------------------cccCCCCCCCcceeEEEEecCc-cccCCCCCChhhhccc-cc
Q 021628           75 VGSQVKKFKVGDEVYGDINE------------------KALDHPKRNGSLAEYTAVEENL-LALKPKNLSFVEAASL-PL  134 (310)
Q Consensus        75 ~g~~~~~~~~Gd~V~~~~~~------------------~~~~~~~~~g~~~~~~~~~~~~-~~~ip~~~~~~~aa~~-~~  134 (310)
                      +|+++.++++||||...+..                  ....+...+|+|+||+++|... ++++|+..+. +++++ ..
T Consensus        77 ~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~-~~a~~~~~  155 (177)
T d1jvba1          77 VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPM-ITKTMKLE  155 (177)
T ss_dssp             ECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCC-CEEEEEGG
T ss_pred             eccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChH-HHHHHHHH
Confidence            99999999999999875421                  1112344579999999998665 5566655554 55544 56


Q ss_pred             hHHHHHHHHHhcccCCCCEEEE
Q 021628          135 ATETAYEGLERSAFSAGKSILV  156 (310)
Q Consensus       135 ~~~ta~~al~~~~~~~g~~vlI  156 (310)
                      ++.++++++...++ .|++|||
T Consensus       156 ~~~~a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         156 EANEAIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             GHHHHHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHhhcc-cCCceEC
Confidence            78899999987776 6899987

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=8.2e-28  Score=186.05  Aligned_cols=148  Identities=26%  Similarity=0.321  Sum_probs=127.1

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++. ..++++ +.+.|++++|||+||+.+++||++|+..+.|.++ ....+|.++|||++|+|++  ..+.
T Consensus         4 ~KA~v~~~~~~~-~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~-~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           4 FQAFVVNKTETE-FTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK-IVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             EEEEEEEEETTE-EEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS-SCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             eEEEEEEecCCc-eEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc-ccccccceeeeeeeeeeec--cCCC
Confidence            899999999998 677888 9999999999999999999999999998888764 2356899999999999998  5567


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH-HhcccCCCCEEEEEc
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLG  158 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g  158 (310)
                      .+++||+|++.....   ....+|+|+||+.+|.+.++++|++++ .+||+++++.+|++.++ ...+++ |++||++|
T Consensus        79 ~~~~g~~v~~~~~~~---~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          79 RFREGDEVIATGYEI---GVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             SCCTTCEEEEESTTB---TTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             ccccCCEEEEecCcc---ccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            899999998865322   123469999999999999999999998 47888888988888887 567775 99999985

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=6.3e-27  Score=187.89  Aligned_cols=150  Identities=21%  Similarity=0.326  Sum_probs=124.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |+|+++.+.+++   |+++ ++|.|+|++|||+||+.++++|++|++++.|.++   .++|.++|||++|+|+++|++++
T Consensus         4 ~~Aav~~~~g~~---l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~---~~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           4 IIAAVTPCKGAD---FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP---VPLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             EEEEEBCSTTCC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             eEEEEEcCCCCC---cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc---ccCCcccccceEEEeeecCccce
Confidence            789999999987   8999 9999999999999999999999999999999763   46899999999999999999999


Q ss_pred             CCCCCCeeEeecCc--------------------cccCCC--------------------CCCCcceeEEEEecCccccC
Q 021628           81 KFKVGDEVYGDINE--------------------KALDHP--------------------KRNGSLAEYTAVEENLLALK  120 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~--------------------~~~~~~--------------------~~~g~~~~~~~~~~~~~~~i  120 (310)
                      ++++||||+..+..                    ....+.                    ...|+|+||.+++..+++++
T Consensus        77 ~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          77 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             eEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            99999999664311                    000110                    12378999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628          121 PKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (310)
Q Consensus       121 p~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~  183 (310)
                      |++++++++                        +++.| +|++|++|+|+++.+ +++.++.+
T Consensus       157 p~~i~~~~~------------------------~~i~g-~g~~g~~aiq~a~~~-g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL------------------------VKFYA-FDEINQAAIDSRKGI-TLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG------------------------EEEEE-GGGHHHHHHHHHHTS-CSEEEEEC
T ss_pred             CCCCCcccE------------------------EEEeC-cHHHHHHHHHHHHHc-CCCEEEEe
Confidence            999886543                        34455 899999999999997 87666543

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=5.8e-27  Score=186.01  Aligned_cols=146  Identities=18%  Similarity=0.304  Sum_probs=121.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++++++++   |+++ +++.|++++|||+||+.++|||++|+++++|.++  ...+|.++|||++|+|+++|+++.
T Consensus         5 ~kA~v~~~~~~p---l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~--~~~~P~vlGHE~~G~V~~vG~~v~   78 (184)
T d1vj0a1           5 AHAMVLEKFNQP---LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP--RVPLPIILGHEGAGRVVEVNGEKR   78 (184)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT--TCCSSBCCCCEEEEEEEEESSCCB
T ss_pred             EEEEEEecCCCC---cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheeccCC--ccccccccceeeeeeeeEEecccc
Confidence            799999999987   7999 9999999999999999999999999999999874  346899999999999999999885


Q ss_pred             -----CCCCCCeeEeecCc----------------------cccC-----CCCCCCcceeEEEEe-cCccccCCCCCChh
Q 021628           81 -----KFKVGDEVYGDINE----------------------KALD-----HPKRNGSLAEYTAVE-ENLLALKPKNLSFV  127 (310)
Q Consensus        81 -----~~~~Gd~V~~~~~~----------------------~~~~-----~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~  127 (310)
                           .+++||+|...+..                      ++++     ....+|+|+||++++ ...++++|++++.+
T Consensus        79 ~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~  158 (184)
T d1vj0a1          79 DLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHR  158 (184)
T ss_dssp             CTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEE
T ss_pred             ccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHH
Confidence                 46899999864321                      0000     113479999999996 57999999999864


Q ss_pred             hhccccchHHHHHHHHHhcccCCCCEEEEEc
Q 021628          128 EAASLPLATETAYEGLERSAFSAGKSILVLG  158 (310)
Q Consensus       128 ~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (310)
                      .    +  +.+|+++++.+++++|++|+|+.
T Consensus       159 ~----p--l~~A~~a~~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         159 L----P--LKEANKALELMESREALKVILYP  183 (184)
T ss_dssp             E----E--GGGHHHHHHHHHHTSCSCEEEEC
T ss_pred             H----H--HHHHHHHHHHhCCCcCCEEEEee
Confidence            2    2  33578889999999999999985

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=2.3e-28  Score=193.20  Aligned_cols=149  Identities=19%  Similarity=0.267  Sum_probs=116.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.++++.    +++ |.|.|+++++||+||+.+++||++|++.+.+..  ....+|.++|||++|+|+++|++++
T Consensus         1 MKa~v~~~~~~l----~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~--~~~~~P~i~GhE~~G~V~~vG~~v~   73 (177)
T d1jqba1           1 MKGFAMLGINKL----GWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGA--LGDRKNMILGHEAVGEVVEVGSEVK   73 (177)
T ss_dssp             CEEEEEEETTEE----EEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCT--TCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CeEEEEEeCCCe----EEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccCC--CCCCCCccCcceeeEEeeecccccc
Confidence            999999999886    999 999999999999999999999999998886544  2357799999999999999999999


Q ss_pred             CCCCCCeeEeecCc---------------------cccCCCCCCCcceeEEEEec--CccccCCCCCChhhhccccchHH
Q 021628           81 KFKVGDEVYGDINE---------------------KALDHPKRNGSLAEYTAVEE--NLLALKPKNLSFVEAASLPLATE  137 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~--~~~~~ip~~~~~~~aa~~~~~~~  137 (310)
                      ++++||||+..+..                     .+..+...+|+|+||+++|.  ..++++|+++++++++.....  
T Consensus        74 ~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~--  151 (177)
T d1jqba1          74 DFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH--  151 (177)
T ss_dssp             SCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE--
T ss_pred             eecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH--
Confidence            99999999865321                     12233446799999999986  368999999998877655433  


Q ss_pred             HHHHHHHhcccCCCCEEEEEcCCcchHHHH
Q 021628          138 TAYEGLERSAFSAGKSILVLGGAGGVGTMV  167 (310)
Q Consensus       138 ta~~al~~~~~~~g~~vlI~g~~g~~G~~a  167 (310)
                       ++.++       ++.++++| .|++|+.+
T Consensus       152 -~~~~~-------~~~vlv~g-~gp~gl~a  172 (177)
T d1jqba1         152 -GFDHI-------EEALLLMK-DKPKDLIK  172 (177)
T ss_dssp             -SGGGH-------HHHHHHHH-HCCTTCSE
T ss_pred             -HHHHh-------cCceEEEC-CCHHHhhe
Confidence             22221       23356666 56666543

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.6e-26  Score=173.43  Aligned_cols=135  Identities=21%  Similarity=0.218  Sum_probs=115.2

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++++|++ ..++++ +++.|++++|||+||+.+++||++|.....|.++. ...+|.++|+|++|+|+++|.  .
T Consensus         1 MkA~v~~~~~~~-~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~-~~~~p~v~G~e~~G~V~~~~~--~   75 (146)
T d1o89a1           1 LQALLLEQQDGK-TLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI-IRNFPMIPGIDFAGTVRTSED--P   75 (146)
T ss_dssp             CEEEEEECC----CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC-CCSSSBCCCSEEEEEEEEECS--T
T ss_pred             CeEEEEEcCCCc-eEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc-ccccceeccccccccceeecc--C
Confidence            999999999998 888999 99999999999999999999999999999997653 356789999999999999765  4


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHH
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGL  143 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al  143 (310)
                      .+++||+|++.....   +...+|+|+||+.+|.++++++|+++|+++||+++++..||+.++
T Consensus        76 ~~~~g~~v~~~~~~~---g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          76 RFHAGQEVLLTGWGV---GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TCCTTCEEEEECTTB---TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CccceeeEEeecccc---eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            789999998865322   223479999999999999999999999999999998888876444

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=4.5e-26  Score=184.04  Aligned_cols=149  Identities=28%  Similarity=0.357  Sum_probs=119.8

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   |+++ |++.|+|+++||+|||.++|||++|++.++|.++   ..+|.++|||++|+|+++|++++
T Consensus         9 ~KAavl~~~~~~---l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~---~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           9 CKAAVLWEEKKP---FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV---TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             EEEEEBCSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             EEEEEEecCCCC---CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCCcc---cccceecccceeEEEEecCcccc
Confidence            899999999987   8999 9999999999999999999999999999999864   56899999999999999999999


Q ss_pred             CCCCCCeeEeecCcccc---------------------------------------CCCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINEKAL---------------------------------------DHPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~---------------------------------------~~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||+..+...+.                                       ......|+|+||+++|..+++++|
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            99999999775421000                                       001124899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEc
Q 021628          122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLG  158 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g  158 (310)
                      +.++++.++...+++.+...+  ...+++|++|+|..
T Consensus       162 ~~~~~e~l~~~~~~~~~v~~g--~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEKINEG--FDLLRSGESIRTIL  196 (198)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHH--HHHHHTTCCSEEEE
T ss_pred             CCCCHHHHHHHHHHHHhhhhC--CceeeCCCEEEEEE
Confidence            998877665554444222211  23467899998764

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.93  E-value=1e-28  Score=199.25  Aligned_cols=163  Identities=23%  Similarity=0.299  Sum_probs=130.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCC-------CCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEE
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSL-------REDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVE   73 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~-------~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~   73 (310)
                      +||++++++++.    +++ |+|.|++       ++|||+||+.+++||++|++.++|.++   ..+|.++|||++|+|+
T Consensus         2 ~kA~v~~~~~~l----e~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~---~~~P~v~GHE~~G~Vv   73 (201)
T d1kola1           2 NRGVVYLGSGKV----EVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT---AQVGLVLGHEITGEVI   73 (201)
T ss_dssp             EEEEEEEETTEE----EEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC---CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEeCCCce----EEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc---cccceeccceeeeeee
Confidence            599999999865    998 8988865       469999999999999999999998763   5689999999999999


Q ss_pred             EeCCCCCCCCCCCeeEeecCc--------------c-------------c-cCCCCCCCcceeEEEEecC--ccccCCCC
Q 021628           74 KVGSQVKKFKVGDEVYGDINE--------------K-------------A-LDHPKRNGSLAEYTAVEEN--LLALKPKN  123 (310)
Q Consensus        74 ~~g~~~~~~~~Gd~V~~~~~~--------------~-------------~-~~~~~~~g~~~~~~~~~~~--~~~~ip~~  123 (310)
                      ++|++++++++||||...+..              .             + ......+|+|+||+++|..  .+++||++
T Consensus        74 ~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~  153 (201)
T d1kola1          74 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  153 (201)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             ccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCC
Confidence            999999999999999754310              0             0 0112346999999999853  79999998


Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA  177 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~  177 (310)
                      .++.+++++...+.++++++.....+.++    +| +|++|++++|+||.+ |+
T Consensus       154 ~~~~~~~~~~~~~~~~~~a~~~~~~~~g~----~g-~G~vG~~~i~~ak~~-GA  201 (201)
T d1kola1         154 DKAMEKINIAEVVGVQVISLDDAPRGYGE----FD-AGVPKKFVIDPHKTF-SA  201 (201)
T ss_dssp             HHHHHTCCHHHHHTEEEECGGGHHHHHHH----HH-HTCSCEEEECTTCSS-CC
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCCCCeE----Ee-eCHHHHHHHHHHHHc-CC
Confidence            77667777766666677777655555554    46 999999999999985 64

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=5.7e-28  Score=188.95  Aligned_cols=155  Identities=30%  Similarity=0.277  Sum_probs=134.0

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++++.+|+. ..|+++ +++.|++++|||+||+.|++||++|++.+.|.++ ....+|.++|+|++|+|++  +.+.
T Consensus         4 ~ka~~~~~~g~~-~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~-~~~~~~~~~g~e~~G~v~~--~~~~   78 (162)
T d1tt7a1           4 FQALQAEKNADD-VSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN-IVREYPLILGIDAAGTVVS--SNDP   78 (162)
T ss_dssp             EEEEEECCGGGS-CCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT-TCSSCSEECCSEEEEEEEE--CSST
T ss_pred             EEEEEEEecCCC-eEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeeccc-ccccceeeeeeeccccccc--cccc
Confidence            899999999998 889999 9999999999999999999999999999988765 2356788999999999998  5667


Q ss_pred             CCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCC
Q 021628           81 KFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGA  160 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~  160 (310)
                      ++++||+|+......   +...+|+|+||+++|.+.++++|+++++++||.+++..+|||.++...++..+++|||+|+.
T Consensus        79 ~~~~g~~v~~~~~~~---g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~~~~~~~~Vli~ga~  155 (162)
T d1tt7a1          79 RFAEGDEVIATSYEL---GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLEETPGALKDILQNRIQ  155 (162)
T ss_dssp             TCCTTCEEEEESTTB---TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECSTTHHHHHHHTTTTCCS
T ss_pred             ccccceeeEeeeccc---eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCc
Confidence            899999998865322   23457999999999999999999999999999999999999987755566667888888876


Q ss_pred             cch
Q 021628          161 GGV  163 (310)
Q Consensus       161 g~~  163 (310)
                      |.+
T Consensus       156 G~v  158 (162)
T d1tt7a1         156 GRV  158 (162)
T ss_dssp             SEE
T ss_pred             ceE
Confidence            653

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.93  E-value=2.3e-26  Score=185.27  Aligned_cols=148  Identities=25%  Similarity=0.271  Sum_probs=120.5

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||+++.+++++   |+++ |+|.|+|++|||+||+.+++||++|++.++|.++   ..+|.++|||++|+|+++|+++.
T Consensus         9 ~KAav~~~~g~~---l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~---~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           9 CKAAVAWEPHKP---LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP---SKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             EEEEEBSSTTSC---CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             EEEEEEccCCCC---CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeeccc---cccccccceeeeeeeeecCcccc
Confidence            899999999987   7999 9999999999999999999999999999999763   56899999999999999999999


Q ss_pred             CCCCCCeeEeecCc------------c---------ccC------------------CCCCCCcceeEEEEecCccccCC
Q 021628           81 KFKVGDEVYGDINE------------K---------ALD------------------HPKRNGSLAEYTAVEENLLALKP  121 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~------------~---------~~~------------------~~~~~g~~~~~~~~~~~~~~~ip  121 (310)
                      ++++||||+..+..            .         ...                  .....|+|+||+.++...++++|
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            99999999875420            0         000                  00124899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHH
Q 021628          122 KNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGT  165 (310)
Q Consensus       122 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~  165 (310)
                      ++++...++...+.+         ..+.++++|+|.| +|++|+
T Consensus       162 ~~~~~~~~~~~~~~~---------~~v~~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTKLTL---------DQINKAFELLSSG-QGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEEECG---------GGHHHHHHHTTTS-SCSEEE
T ss_pred             CCCCHHHHHHhhcch---------hhcCCCCEEEEEC-CCcceE
Confidence            999987766555443         2233445677878 787775

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=9.5e-25  Score=172.70  Aligned_cols=140  Identities=19%  Similarity=0.192  Sum_probs=112.7

Q ss_pred             CEEEEEcccCCCccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 021628            1 MKAWVYKEYGNSQSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQVK   80 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~~~   80 (310)
                      |||++..+++++   |+++ |+|.|+|++|||+||+.+++||++|++.+.|.++  ...+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~p---l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~--~~~~P~i~GhE~~G~V~~vG~~V~   74 (179)
T d1uufa1           1 IKAVGAYSAKQP---LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA--GTVYPCVPGHEIVGRVVAVGDQVE   74 (179)
T ss_dssp             CEEEEBSSTTSC---CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS--CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CeEEEEccCCCC---CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeeeec--cccccccccccccccchhhccccc
Confidence            999999999998   8999 9999999999999999999999999999999764  357899999999999999999999


Q ss_pred             CCCCCCeeEeecCc-------------------c--cc------CCCCCCCcceeEEEEecCccccCCCCCChhhhcccc
Q 021628           81 KFKVGDEVYGDINE-------------------K--AL------DHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLP  133 (310)
Q Consensus        81 ~~~~Gd~V~~~~~~-------------------~--~~------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  133 (310)
                      ++++||+|...+..                   .  ..      .....+|+|+||+.+|...++++|+.....   ...
T Consensus        75 ~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a  151 (179)
T d1uufa1          75 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRA  151 (179)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECG
T ss_pred             cCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHh
Confidence            99999999643210                   0  00      111236899999999999999999664322   122


Q ss_pred             chHHHHHHHHHhcccC
Q 021628          134 LATETAYEGLERSAFS  149 (310)
Q Consensus       134 ~~~~ta~~al~~~~~~  149 (310)
                      ..+.++++++..+.++
T Consensus       152 ~~l~~a~~a~~~a~v~  167 (179)
T d1uufa1         152 DQINEAYERMLRGDVK  167 (179)
T ss_dssp             GGHHHHHHHHHTTCSS
T ss_pred             chhHHHHHHHHHhCcc
Confidence            3556788887665544

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=1.5e-27  Score=189.47  Aligned_cols=159  Identities=18%  Similarity=0.213  Sum_probs=131.5

Q ss_pred             CEEEEEcccCCCccceEEec-cccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCC--------CCCCCcccccceeEE
Q 021628            1 MKAWVYKEYGNSQSVLKFET-NVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSAT--------DSPLPTIPGYDVAGV   71 (310)
Q Consensus         1 mka~~~~~~g~~~~~l~~~~-~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~--------~~~~p~~~G~e~~G~   71 (310)
                      |||++++++|++.+.|+++. +.|.|++++|||+||+.+++||++|++.++|.++..        ....|.++|+|++|+
T Consensus         4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~   83 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (175)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence            79999999999744555531 667888999999999999999999999999876432        235678899999999


Q ss_pred             EEEeCCCCCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChhhhccccchHHHHHHHHH--hcccC
Q 021628           72 VEKVGSQVKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFVEAASLPLATETAYEGLE--RSAFS  149 (310)
Q Consensus        72 V~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~--~~~~~  149 (310)
                      |++.|..+..++.||+|....        ...|+|+||+.+|.+.++++|++++.+.+  ++++.+|||+++.  ..+++
T Consensus        84 V~~~~~~~~~~~~g~~v~~~~--------~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~  153 (175)
T d1gu7a1          84 VIKVGSNVSSLEAGDWVIPSH--------VNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTK  153 (175)
T ss_dssp             EEEECTTCCSCCTTCEEEESS--------SCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSS
T ss_pred             cccccccccccccccceeccc--------cccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCC
Confidence            999999999999999998754        34689999999999999999998764444  4456678888873  46899


Q ss_pred             CCCEEEEEcC-CcchHHHHHH
Q 021628          150 AGKSILVLGG-AGGVGTMVIQ  169 (310)
Q Consensus       150 ~g~~vlI~g~-~g~~G~~a~~  169 (310)
                      +||+|+|.|+ +|++|++++|
T Consensus       154 ~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         154 PLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             CHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCEEEEECccchhhhheEEe
Confidence            9999999984 5789988765

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=2e-22  Score=158.35  Aligned_cols=149  Identities=27%  Similarity=0.314  Sum_probs=119.5

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      ++++.||++.|+..|+|++++..+++|||+|+|+| +|++|++++|+++.+ |++|++++++++|++.++++|+++++++
T Consensus         1 lp~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~G-aG~vG~~a~q~ak~~-G~~vi~~~~~~~k~~~a~~lGa~~~i~~   78 (168)
T d1piwa2           1 IPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVG-LGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKMGADHYIAT   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEC-CCCcchhHHHHhhhc-cccccccccchhHHHHhhccCCcEEeec
Confidence            35678899999999999999989999999999999 699999999999996 9999999999999999999999999887


Q ss_pred             CCCc-c-cccCCCccEEEeCCCC-----hHHHHhhcccCCEEEEEeCCCCCCceEE----------EE--ecCHHHHHHH
Q 021628          204 TKEN-I-EDLPEKFDVVFDAVGQ-----CDKALKAVKEGGRVVSIIGSVTPPASSF----------VL--TSDGSILEKL  264 (310)
Q Consensus       204 ~~~~-~-~~~~~~~dvvi~~~g~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~----------~~--~~~~~~~~~~  264 (310)
                      .++. . ....+++|.++||.++     +..++++++++|+++.+|....+..+++          ..  ....++++++
T Consensus        79 ~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~  158 (168)
T d1piwa2          79 LEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQL  158 (168)
T ss_dssp             GGTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHH
T ss_pred             cchHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHH
Confidence            5432 2 2345689999999762     4688999999999999987653333222          11  1135667777


Q ss_pred             HHHHHcCCee
Q 021628          265 NPYFESGKVK  274 (310)
Q Consensus       265 ~~~~~~~~~~  274 (310)
                      ++|+++|+++
T Consensus       159 l~li~~gkIk  168 (168)
T d1piwa2         159 LKLVSEKDIK  168 (168)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHhCCCC
Confidence            7777777653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.1e-22  Score=162.33  Aligned_cols=149  Identities=26%  Similarity=0.405  Sum_probs=123.1

Q ss_pred             hhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC
Q 021628          127 VEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK  205 (310)
Q Consensus       127 ~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~  205 (310)
                      ++||+++++++|||+++ +.+++++||+|||+|++|++|++++|+|+.+ |++++++++++++++.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~-g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccc-cccceeeecccccccccccccccccccCCc
Confidence            47899999999999998 6789999999999999999999999999996 999999999999999999999999999887


Q ss_pred             Cccccc------CCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCCCC-----------CceEEEEec----------
Q 021628          206 ENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSVTP-----------PASSFVLTS----------  256 (310)
Q Consensus       206 ~~~~~~------~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~----------  256 (310)
                      +++.+.      .+|+|++||++|.  ++.++++|+++|+++.+|.....           ....+....          
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPA  159 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCHH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCHH
Confidence            775432      3589999999984  68899999999999999754311           111222110          


Q ss_pred             -CHHHHHHHHHHHHcCCeeEE
Q 021628          257 -DGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       257 -~~~~~~~~~~~~~~~~~~~~  276 (310)
                       ..+.++++++++++|++++.
T Consensus       160 ~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         160 RYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHCCCCcee
Confidence             13557888899999999874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.7e-22  Score=157.78  Aligned_cols=120  Identities=26%  Similarity=0.430  Sum_probs=108.4

Q ss_pred             CChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee
Q 021628          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +|+++||+++++++|||+++ +.+++++||+|+|+|++|++|++++|+|+.+ |++|+++++++++++.++++|++++++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~-G~~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccccccc-CcccccccccccccccccccCcccccc
Confidence            57899999999999999998 5789999999999998899999999999996 999999999999999999999999999


Q ss_pred             CCCCccccc------CCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCC
Q 021628          203 YTKENIEDL------PEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       203 ~~~~~~~~~------~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~  244 (310)
                      +.++++.+.      .+++|++||++|.  .+.++++++++|+++.+|..
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~  129 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSR  129 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCC
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecC
Confidence            887765432      4589999999984  58899999999999999853

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.2e-21  Score=153.83  Aligned_cols=121  Identities=29%  Similarity=0.380  Sum_probs=106.8

Q ss_pred             CCChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee
Q 021628          123 NLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       123 ~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +.+++.+|+++|+..|+|++++.+++++||+|+|+| +|++|++++|+|+.+ |++++++++++++++.++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~G-aG~vG~~a~qlak~~-Ga~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVG-IGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEec-cchHHHHHHHHhhcc-cccchhhccchhHHHHHhccCCcEEEE
Confidence            456778889999999999999999999999999999 799999999999996 999999999999999999999999999


Q ss_pred             CCCCccc-ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          203 YTKENIE-DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       203 ~~~~~~~-~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.+++.. ...+++|++||++|.   +..++++++++|+++.+|...
T Consensus        81 ~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  127 (168)
T d1uufa2          81 SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA  127 (168)
T ss_dssp             TTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred             CchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCC
Confidence            8765533 345689999999973   689999999999999998643

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.86  E-value=1.4e-21  Score=153.91  Aligned_cols=121  Identities=27%  Similarity=0.375  Sum_probs=107.4

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEee
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +|+.+||+++|++.|||++++..++++||+|+|+|++|++|++++++++.+ | .+|++++.+++|++.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~-g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeeccccc-ccccccccccchhhHHHHHHcCCceeec
Confidence            578999999999999999999899999999999998899999999999997 6 58888899999999999999999998


Q ss_pred             CCCCccccc------CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          203 YTKENIEDL------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       203 ~~~~~~~~~------~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.++++.+.      .+++|++|||+|+   ++.++++++++|+++.+|.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~  131 (170)
T d1jvba2          80 ASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG  131 (170)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC
T ss_pred             cCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEecccc
Confidence            877665332      3579999999985   478899999999999998654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.86  E-value=1.7e-21  Score=153.55  Aligned_cols=120  Identities=29%  Similarity=0.363  Sum_probs=106.9

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +|+++|+.+++++.|+|++++.+++++||+|+|+| +|++|++++|+|+.+ |+ +|++++.+++|++.++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~G-aG~vGl~~~q~ak~~-Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIG-IGAVGLMGIAGAKLR-GAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTT-TCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEc-CCcchhhhhhhhhcc-cccccccccchhhhHHHHHhhCcccccc
Confidence            57899999999999999999999999999999998 799999999999996 87 7889999999999999999999998


Q ss_pred             CCCCccccc------CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          203 YTKENIEDL------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       203 ~~~~~~~~~------~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.++++.+.      ..|+|+||||+|+   ++.++++++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  130 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHG  130 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecC
Confidence            877664331      3579999999984   588999999999999998654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=3.6e-22  Score=157.18  Aligned_cols=120  Identities=34%  Similarity=0.481  Sum_probs=105.5

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      +++++||+++++++|||++++.++++|||+|+|+|++|++|++++|+|+.+ |++|+++++++++++.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~-G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccc-ccccccccccccccccccccccceeeeh
Confidence            578999999999999999998899999999999998999999999999996 9999999999999999999999999987


Q ss_pred             CCCcc-cccCCCccEEEeCCC-ChHHHHhhcccCCEEEEEeCC
Q 021628          204 TKENI-EDLPEKFDVVFDAVG-QCDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       204 ~~~~~-~~~~~~~dvvi~~~g-~~~~~~~~l~~~G~~v~~g~~  244 (310)
                      .+... ....+|+|+|||++| .++.++++++++|+++.+|..
T Consensus        80 ~~~~~~~~~~~g~D~v~d~~G~~~~~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2          80 AEVPERAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             GGHHHHHHHTTSEEEEEECSCTTHHHHHTTEEEEEEEEEC---
T ss_pred             hhhhhhhhccccccccccccchhHHHHHHHHhcCCcEEEEeCC
Confidence            64321 223568999999998 468999999999999999854

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=3e-21  Score=151.34  Aligned_cols=120  Identities=26%  Similarity=0.380  Sum_probs=105.1

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      +|+++||+++|++.|||++++.+++++||+|+|+| +|++|+++++++|.+ |++|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~G-aG~vG~~~~~~ak~~-G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISG-IGGLGHVAVQYARAM-GLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-ccccHHHHHHHHHHc-CCccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999999889999999999999 799999999999996 9999999999999999999999999998


Q ss_pred             CCCcccc----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          204 TKENIED----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       204 ~~~~~~~----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .+++..+    ...+.+.++++++.   ++.++++++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~  127 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPP  127 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCS
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecC
Confidence            7766432    23467777777653   588999999999999998644

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.4e-21  Score=152.87  Aligned_cols=121  Identities=30%  Similarity=0.404  Sum_probs=109.2

Q ss_pred             CChhhhccccchHHHHHHHHH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee
Q 021628          124 LSFVEAASLPLATETAYEGLE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +|+++||+++++++|||+++. .++++|||+|+|+|++|++|++++|+|+.. |++|+++++++++++.++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~-Ga~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHh-CCeEeecccchHHHHHHHhcCCeEEEE
Confidence            578999999999999999995 678999999999999999999999999996 999999999999999999999999999


Q ss_pred             CCCCccccc------CCCccEEEeCCC--ChHHHHhhcccCCEEEEEeCCC
Q 021628          203 YTKENIEDL------PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       203 ~~~~~~~~~------~~~~dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ++++++.+.      .+++|+++|+.|  .+..++.+++++|+++.++...
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccccc
Confidence            988776442      458999999987  3589999999999999987654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.84  E-value=2.2e-20  Score=146.97  Aligned_cols=160  Identities=16%  Similarity=0.178  Sum_probs=120.1

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      ++++||+++|++.|+|+++ +.+++++||+|+|+| +|++|++++|+++.+ |+ +|++++.+++|++.++++|++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~-Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~   79 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGATDCLN   79 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHh-CCceeeeeccchHHHHHHHHhCCCcccC
Confidence            5788999999999999998 689999999999999 899999999999997 87 5667788999999999999999988


Q ss_pred             CCCCc-c-cc-----cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcC
Q 021628          203 YTKEN-I-ED-----LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESG  271 (310)
Q Consensus       203 ~~~~~-~-~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (310)
                      +...+ . ..     ...|+|++|||+|+   ++.++++++++ |+++.+|.+....  .+..          ..++.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~--~i~~----------~~~~~~k  147 (174)
T d1e3ia2          80 PRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM--TIPT----------VDVILGR  147 (174)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEE--EEEH----------HHHHTTC
T ss_pred             CccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCcc--ccch----------HHHhccC
Confidence            65432 1 11     24689999999996   48999999996 9999998654222  1111          1223333


Q ss_pred             CeeEEecCCcccchhhHHHHHHHHHcCC
Q 021628          272 KVKAIIDPKGPFPFSQTLEAFSHLESSR  299 (310)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~  299 (310)
                      .+.-. ......+.+++++.++.+++++
T Consensus       148 ~i~Gs-~~Gs~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         148 SINGT-FFGGWKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             EEEEC-SGGGCCHHHHHHHHHHHHHTTS
T ss_pred             EEEEE-EeeCCChHHHHHHHHHHHHCcC
Confidence            33211 1123446777888777776653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.84  E-value=2.9e-20  Score=146.60  Aligned_cols=120  Identities=19%  Similarity=0.264  Sum_probs=103.5

Q ss_pred             CChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEE-EEecChhhHHHHHHcCCCEEe
Q 021628          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKV-AATSSTAKLDLLRSLGADLAI  201 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi-~~~~~~~~~~~~~~~g~~~~~  201 (310)
                      ++++.|++++|++.|||+++ +.++++|||+|+|+| +|++|++++|+++.+ |++++ +++.+++|++.++++|+++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G-~G~iG~~~~~~ak~~-g~~~v~~~~~~~~k~~~a~~~Ga~~~i   78 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWG-AGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLGATHVI   78 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEES-CSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeC-CCHHHhhhhhccccc-ccceeeeeccHHHHHHHHHHcCCeEEE
Confidence            35678999999999999997 678999999999999 699999999999997 87655 557799999999999999999


Q ss_pred             eCCCCccccc-----CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          202 DYTKENIEDL-----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       202 ~~~~~~~~~~-----~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ++++++..+.     ..++|+||||+|+   ++.+++.++++|+++.+|...
T Consensus        79 ~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~  130 (174)
T d1f8fa2          79 NSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ  130 (174)
T ss_dssp             ETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred             eCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecC
Confidence            9887665432     3589999999985   478899999999999998643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.84  E-value=1.7e-20  Score=147.17  Aligned_cols=120  Identities=29%  Similarity=0.420  Sum_probs=104.5

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      +|+++||+++|+++|||++++..+++|||+|+|+| +|++|++++++++.. |++|++++.+++|++.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G-~G~iG~~a~~~a~~~-g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYG-IGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEee-cccchhhhhHHHhcC-CCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999999999999999999998 799999999999995 9999999999999999999999999998


Q ss_pred             CCCccccc----CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          204 TKENIEDL----PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       204 ~~~~~~~~----~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .++++...    ..+.+.+++++++   ++.++++++++|+++.+|...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~  127 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPP  127 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEeccccc
Confidence            77665432    3456666666653   589999999999999998654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.1e-20  Score=147.08  Aligned_cols=120  Identities=27%  Similarity=0.427  Sum_probs=103.2

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +++++||.. .++.+||++++.+++++||+|+|+| +|++|++++++++.+ |+ +|++++++++|++.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~~~~~~~gd~VlI~G-~G~iG~~~~~~a~~~-G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEC-CCccHHHHHHHHHHc-CCceEEeccCCHHHHHHHHHhCCccccc
Confidence            467888877 2445699999999999999999999 799999999999996 88 7889999999999999999999998


Q ss_pred             CCCCcccc--------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC
Q 021628          203 YTKENIED--------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT  246 (310)
Q Consensus       203 ~~~~~~~~--------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~  246 (310)
                      ..+++..+        ...++|+||||+|+   ++.++++++++|+++.+|.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~  132 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE  132 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC
Confidence            87666432        24589999999995   4889999999999999997653

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.83  E-value=8e-21  Score=149.17  Aligned_cols=121  Identities=26%  Similarity=0.319  Sum_probs=104.5

Q ss_pred             CChhhhccccchHHHHHHHHH----hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE
Q 021628          124 LSFVEAASLPLATETAYEGLE----RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~----~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +++++||+++++++|||++++    ....++|++|||+|++|++|.+++|+|+.+ |++|+++++++++.+.++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~-Ga~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHc-CCceEEecCchHHHHHHHhcccce
Confidence            578999999999999997763    478889999999999999999999999996 999999999999999999999999


Q ss_pred             EeeCCCCcccc----cCCCccEEEeCCC--ChHHHHhhcccCCEEEEEeCCC
Q 021628          200 AIDYTKENIED----LPEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       200 ~~~~~~~~~~~----~~~~~dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ++++++.....    ..+++|+|||+.|  .+...+++|+++|+++.+|...
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~  131 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTG  131 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCS
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeeccc
Confidence            99876433211    2458999999997  4799999999999999998653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=5.2e-20  Score=146.32  Aligned_cols=120  Identities=24%  Similarity=0.369  Sum_probs=103.6

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      |+..+|.+.|++.|||+++ +..++++||+|+|+| +|++|++++|+|+.+ |+ +|++++++++|++.++++|++++++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~G-aG~iG~~~~~~ak~~-Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~   79 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAEEIGADLTLN   79 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEEC-CCccchhheeccccc-ccccccccccccccccccccccceEEEe
Confidence            3457888899999999999 567899999999999 699999999999996 87 6889999999999999999999999


Q ss_pred             CCCCccccc---------CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC
Q 021628          203 YTKENIEDL---------PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT  246 (310)
Q Consensus       203 ~~~~~~~~~---------~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~  246 (310)
                      +.+++..+.         ..|+|+||||+|+   ++.++++++++|+++.+|....
T Consensus        80 ~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~  135 (182)
T d1vj0a2          80 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP  135 (182)
T ss_dssp             TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSC
T ss_pred             ccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCC
Confidence            877654221         3479999999984   4789999999999999986543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.83  E-value=6.9e-20  Score=144.22  Aligned_cols=121  Identities=20%  Similarity=0.226  Sum_probs=100.6

Q ss_pred             hhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          126 FVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       126 ~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      +.+||++.|++.|+|+++ +.+++++||+|+|+| +|++|++++|+++.+ |+ +|++++.+++|++.++++|+++++|+
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~G-aGgvGl~a~~~ak~~-G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~   79 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFG-LGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIELGATECLNP   79 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHc-CCceeeccCChHHHHHHHHHcCCcEEEcC
Confidence            457899999999999998 689999999999999 799999999999997 76 67788889999999999999999987


Q ss_pred             CCCcc--cc-----cCCCccEEEeCCCC---hHHHHhhccc-CCEEEEEeCCCCCC
Q 021628          204 TKENI--ED-----LPEKFDVVFDAVGQ---CDKALKAVKE-GGRVVSIIGSVTPP  248 (310)
Q Consensus       204 ~~~~~--~~-----~~~~~dvvi~~~g~---~~~~~~~l~~-~G~~v~~g~~~~~~  248 (310)
                      .+.+.  ..     ..+++|++||++|+   .+..+..+.+ +|+++.+|......
T Consensus        80 ~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~  135 (174)
T d1p0fa2          80 KDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE  135 (174)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTC
T ss_pred             CCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCcc
Confidence            65442  11     24589999999985   3677777766 59999998654333

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.83  E-value=5.7e-20  Score=144.70  Aligned_cols=117  Identities=27%  Similarity=0.424  Sum_probs=100.1

Q ss_pred             hhhhccccchHHHHHHHHHh-c-ccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          126 FVEAASLPLATETAYEGLER-S-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       126 ~~~aa~~~~~~~ta~~al~~-~-~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      +.++|+++|+++|||+++.. . .++|||+|+|+| +|++|++++++++.+ |+ .+++++.+++|++.++++|++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~G-aG~vG~~~~~~a~~~-g~~~vv~~~~~~~k~~~~~~~ga~~~i~   83 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG-VGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERLGADHVVD   83 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeC-CChHHHHHHHHHHhh-cCcccccccchhHHHHHHhhcccceeec
Confidence            56889999999999999954 3 589999999999 799999999999997 65 6667788999999999999999999


Q ss_pred             CCCCcccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCC
Q 021628          203 YTKENIED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       203 ~~~~~~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~  244 (310)
                      +.+++...     ...++|+||||+|+   ++.++++++++|+++.+|..
T Consensus        84 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~  133 (172)
T d1h2ba2          84 ARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG  133 (172)
T ss_dssp             TTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS
T ss_pred             CcccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc
Confidence            87655432     23579999999984   58899999999999999853

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.82  E-value=7.5e-20  Score=143.80  Aligned_cols=120  Identities=23%  Similarity=0.361  Sum_probs=100.2

Q ss_pred             CChhhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          124 LSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      +|+++||++ .++.+||++++.+++++||+|+|+| +|++|++++|+++.+ |++|++++++++|++.++++|++..+..
T Consensus         1 VS~e~Aal~-ePla~a~~a~~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~-Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACRRAGVQLGTTVLVIG-AGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEc-ccccchhhHhhHhhh-cccccccchHHHHHHHHHHcCCcEEEec
Confidence            478898877 2345699999999999999999998 899999999999996 9999999999999999999999887654


Q ss_pred             CC--Ccccc--------cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCCC
Q 021628          204 TK--ENIED--------LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSVT  246 (310)
Q Consensus       204 ~~--~~~~~--------~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~~  246 (310)
                      +.  ++..+        ...++|+||||+|+   ++.++++++++|+++.+|.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC
Confidence            32  22211        14589999999985   4889999999999999986543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.82  E-value=2.5e-19  Score=141.55  Aligned_cols=119  Identities=24%  Similarity=0.361  Sum_probs=99.6

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEee
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      ++++||+++|++.|+|+++ +.++++|||+|+|+| +|++|++++|+++.+ |+ +|++++++++|++.++++|++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~G-aGGvG~~aiq~ak~~-G~~~vi~~~~~~~k~~~ak~lGa~~~i~   79 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFG-LGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGATECIN   79 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEec-chhHHHHHHHHHHHH-hcCceEEEcccHHHHHHHHHhCCcEEEe
Confidence            5789999999999999998 578999999999999 689999999999997 75 5667777999999999999999998


Q ss_pred             CCCC-c-ccc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          203 YTKE-N-IED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       203 ~~~~-~-~~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.+. + ...     ...++|+|||++|.   .+.++.+++++|+++.++...
T Consensus        80 ~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~  132 (176)
T d2fzwa2          80 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA  132 (176)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeec
Confidence            7542 2 111     24589999999985   477888899998988776544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.81  E-value=6.3e-20  Score=145.79  Aligned_cols=114  Identities=32%  Similarity=0.497  Sum_probs=101.9

Q ss_pred             ccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          130 ASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       130 a~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      ++++++++|||+++ +.+++++||+|+|+|++|++|++++|+|+.. |++||++++++++.+.++++|+++++++.++++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHcc-CCEEEEeCCCHHHHHHHHhhhhhhhcccccccH
Confidence            46678899999999 5889999999999999999999999999996 999999999999999999999999999877765


Q ss_pred             cc------cCCCccEEEeCCC--ChHHHHhhcccCCEEEEEeCC
Q 021628          209 ED------LPEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       209 ~~------~~~~~dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~  244 (310)
                      .+      ..+|+|+|||++|  ..+..+++++++|+++.+|..
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~  130 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI  130 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCG
T ss_pred             HHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecce
Confidence            33      2458999999998  358999999999999999853

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.81  E-value=5.9e-19  Score=139.02  Aligned_cols=123  Identities=19%  Similarity=0.249  Sum_probs=103.3

Q ss_pred             CChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHHcCCCEEe
Q 021628          124 LSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRSLGADLAI  201 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~~g~~~~~  201 (310)
                      .++++||.++|++.|+|+|+ +.+++++||+|+|+| +|++|++++++++.+ | .+|++++.+++|++.++++|+++++
T Consensus         2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G-~GgvGl~ai~~ak~~-G~~~Vi~vd~~~~kl~~Ak~~GA~~~i   79 (176)
T d1d1ta2           2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFG-LGGVGLSVIMGCKSA-GASRIIGIDLNKDKFEKAMAVGATECI   79 (176)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred             cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEEC-CCchhHHHHHHHHHc-CCceEEEecCcHHHHHHHHhcCCcEEE
Confidence            35889999999999999998 679999999999999 899999999999996 7 5788999999999999999999999


Q ss_pred             eCCCCccc-c------cCCCccEEEeCCCC---hHHHHhhcccC-CEEEEEeCCCCCC
Q 021628          202 DYTKENIE-D------LPEKFDVVFDAVGQ---CDKALKAVKEG-GRVVSIIGSVTPP  248 (310)
Q Consensus       202 ~~~~~~~~-~------~~~~~dvvi~~~g~---~~~~~~~l~~~-G~~v~~g~~~~~~  248 (310)
                      |+.+.+.. .      ...|+|++||++|.   ...++..+.++ |+++.+|.+....
T Consensus        80 n~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~  137 (176)
T d1d1ta2          80 SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK  137 (176)
T ss_dssp             CGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTC
T ss_pred             CccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccccc
Confidence            87654421 1      24589999999985   35667666555 9999998765433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.81  E-value=1.9e-19  Score=143.79  Aligned_cols=121  Identities=20%  Similarity=0.325  Sum_probs=100.9

Q ss_pred             CChhhhccccchHHHHHHHHH-hcccCCCCEEEEE-cCCcchHHHHHHHHHhhcCCcEEEEecChh----hHHHHHHcCC
Q 021628          124 LSFVEAASLPLATETAYEGLE-RSAFSAGKSILVL-GGAGGVGTMVIQLAKHVFGASKVAATSSTA----KLDLLRSLGA  197 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al~-~~~~~~g~~vlI~-g~~g~~G~~a~~la~~~~g~~vi~~~~~~~----~~~~~~~~g~  197 (310)
                      +|+++||+++++++|||+++. .++++||++|+|+ |++|++|++++|+||.+ |++||+++++.+    +.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~-Ga~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhc-CCeEEEEEecccccchHHhhhhhccc
Confidence            578999999999999999995 7899999988886 77899999999999997 999999986544    3556789999


Q ss_pred             CEEeeCCCCcccc-----------cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCC
Q 021628          198 DLAIDYTKENIED-----------LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       198 ~~~~~~~~~~~~~-----------~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ++++++++.+..+           ..+++|++||++|.  ....+++|+++|+++.+|...
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~  140 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS  140 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCS
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCcc
Confidence            9999875433221           14579999999983  588999999999999998643

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.79  E-value=4e-18  Score=134.47  Aligned_cols=120  Identities=21%  Similarity=0.282  Sum_probs=98.5

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      ++++||+++|+++|+|+++ +.++++|||+|+|+| +|++|++++++++...+.+|++++++++|++.++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            5789999999999999998 689999999999999 68999999999999733588888899999999999999998876


Q ss_pred             CCC-cc-cc-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          204 TKE-NI-ED-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       204 ~~~-~~-~~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .+. +. ..     ..+|+|++||++|.   .+.++.+++++|+.+.++...
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~  132 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP  132 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCC
Confidence            442 21 11     24589999999984   477888998886666665543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.78  E-value=4.9e-18  Score=133.89  Aligned_cols=119  Identities=17%  Similarity=0.237  Sum_probs=97.9

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~  203 (310)
                      ++++||+++|++.|+|+++ +.+++++||+|+|+| +|++|++++++++...+.+|++++++++|++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            5789999999999999998 688999999999999 89999999999998634578888889999999999999999987


Q ss_pred             CCCccc--c-----cCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCC
Q 021628          204 TKENIE--D-----LPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       204 ~~~~~~--~-----~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~  244 (310)
                      .+++..  .     ..+|+|++||++|.   .+.++.++.++|..+.+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~  131 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW  131 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEe
Confidence            654321  1     14589999999985   36777887777666555544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=4.4e-19  Score=139.45  Aligned_cols=121  Identities=25%  Similarity=0.269  Sum_probs=103.8

Q ss_pred             CChhhhccccchHHHHHHHH---Hhc-ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE
Q 021628          124 LSFVEAASLPLATETAYEGL---ERS-AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL  199 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al---~~~-~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~  199 (310)
                      +|+.+||.++++.+|||+++   ... ...++++|+|+|++|++|.+|+|+||.+ |++||++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~-Ga~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHc-CCCeEEEecchhHHHHHHhhcccc
Confidence            57899999999999999776   333 4445679999999999999999999996 999999999999999999999999


Q ss_pred             EeeCCCCccccc--CCCccEEEeCCC--ChHHHHhhcccCCEEEEEeCCC
Q 021628          200 AIDYTKENIEDL--PEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       200 ~~~~~~~~~~~~--~~~~dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ++++++++....  ....|.++|++|  .+...+++++++|+++.+|...
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~  129 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAG  129 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccC
Confidence            999876554432  245799999998  4689999999999999998654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.75  E-value=5.6e-18  Score=135.44  Aligned_cols=117  Identities=21%  Similarity=0.272  Sum_probs=101.8

Q ss_pred             hhhccccchHHHHHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHcCCCEEeeCCC
Q 021628          127 VEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSLGADLAIDYTK  205 (310)
Q Consensus       127 ~~aa~~~~~~~ta~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~  205 (310)
                      ++.+.++..+.|||++++.+++++||+|+|+| +|++|++++++++.+ |+ +|++++.+++|++.++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a~v~~G~tVlV~G-aG~vGl~a~~~ak~~-ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTAGVGPGSTVYVAG-AGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHHHhCCCCCCEEEEEC-cCHHHHHHHHHHHhh-cccceeeecccchhhHhhhhccccEEEeCCC
Confidence            46777888999999999999999999999999 799999999999996 66 7788889999999999999999998877


Q ss_pred             Ccccc------cCCCccEEEeCCC------------------ChHHHHhhcccCCEEEEEeCCC
Q 021628          206 ENIED------LPEKFDVVFDAVG------------------QCDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       206 ~~~~~------~~~~~dvvi~~~g------------------~~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +++.+      ...++|++||++|                  .++.++++++++|+++.+|.+.
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~  143 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV  143 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence            66533      1458999999987                  2478999999999999998654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.73  E-value=6.5e-18  Score=134.47  Aligned_cols=118  Identities=27%  Similarity=0.474  Sum_probs=94.8

Q ss_pred             ChhhhccccchHHHHHHHH-HhcccCCC--CEEEEEcCCcchHHHHHHHHHhhcCCcEEE-EecChhhHHHH-HHcCCCE
Q 021628          125 SFVEAASLPLATETAYEGL-ERSAFSAG--KSILVLGGAGGVGTMVIQLAKHVFGASKVA-ATSSTAKLDLL-RSLGADL  199 (310)
Q Consensus       125 ~~~~aa~~~~~~~ta~~al-~~~~~~~g--~~vlI~g~~g~~G~~a~~la~~~~g~~vi~-~~~~~~~~~~~-~~~g~~~  199 (310)
                      |..+. ++++++.|||+++ +.+++++|  ++|||+|++|++|.+++|+||.+ |+++++ +++++++...+ +++|+++
T Consensus         3 ~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~-Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           3 SYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLL-GCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHT-TCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             cHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHc-CCcceecccchHHHHhhhhhcccceE
Confidence            34444 3677899999999 57888887  89999999999999999999996 986554 56676665555 6899999


Q ss_pred             EeeCCCCcccc-----cCCCccEEEeCCC--ChHHHHhhcccCCEEEEEeCC
Q 021628          200 AIDYTKENIED-----LPEKFDVVFDAVG--QCDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       200 ~~~~~~~~~~~-----~~~~~dvvi~~~g--~~~~~~~~l~~~G~~v~~g~~  244 (310)
                      ++|+.++++.+     ..+|+|+|||++|  .++..+++++++|+++.+|..
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~  132 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQI  132 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC---
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccc
Confidence            99998877653     2468999999998  368999999999999999853

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.69  E-value=2.4e-17  Score=128.09  Aligned_cols=111  Identities=27%  Similarity=0.297  Sum_probs=91.8

Q ss_pred             chHHHHHHH---HH-hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          134 LATETAYEG---LE-RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       134 ~~~~ta~~a---l~-~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      ++..|||.+   +. ....+++++|||+|++|++|.+++|+||.+ |++|+++++++++.+.++++|+++++++++....
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~   81 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQLGASEVISREDVYDG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSS
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHc-CCceEEEecCHHHHHHHHhhcccceEeccchhch
Confidence            345677654   43 455677889999999999999999999997 9999999999999999999999999876532222


Q ss_pred             c----cCCCccEEEeCCCC--hHHHHhhcccCCEEEEEeCCC
Q 021628          210 D----LPEKFDVVFDAVGQ--CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~----~~~~~dvvi~~~g~--~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .    ..+++|+|||++|.  +...+++|+++|+++.+|...
T Consensus        82 ~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~  123 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTG  123 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSS
T ss_pred             hhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccC
Confidence            1    24589999999983  689999999999999998654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.67  E-value=1.2e-15  Score=115.33  Aligned_cols=133  Identities=17%  Similarity=0.206  Sum_probs=100.0

Q ss_pred             EEEEEccc--CCC-ccceEEeccccCCCCCCCcEEEEEeEeecCHHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCC
Q 021628            2 KAWVYKEY--GNS-QSVLKFETNVEVPSLREDQVLIKVVAAALNPIDFKRMLGAFSATDSPLPTIPGYDVAGVVEKVGSQ   78 (310)
Q Consensus         2 ka~~~~~~--g~~-~~~l~~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~p~~~G~e~~G~V~~~g~~   78 (310)
                      |+|++.+.  |.+ .+.++++ +.+.|++++|||+||+.|.++++........      .+.+..+..+++|+|++  ++
T Consensus         5 k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~~~------~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           5 KSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIASKR------LKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             EEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHGGG------SCTTSBCCCCEEEEEEE--ES
T ss_pred             EEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccccc------cccCCccccceEEEEEE--eC
Confidence            77888876  544 2569999 9999999999999999999999875433221      22344566688999998  67


Q ss_pred             CCCCCCCCeeEeecCccccCCCCCCCcceeEEEEecCccccCCCCCChh-----hhccccchHHHH-HHHHHhcccCCCC
Q 021628           79 VKKFKVGDEVYGDINEKALDHPKRNGSLAEYTAVEENLLALKPKNLSFV-----EAASLPLATETA-YEGLERSAFSAGK  152 (310)
Q Consensus        79 ~~~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~-----~aa~~~~~~~ta-~~al~~~~~~~g~  152 (310)
                      .++|++||+|++            .++|++|.+.+...+.++|++++..     ..+++....+|| |..+ ....+.|+
T Consensus        76 ~~~f~~GD~V~g------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl-~~~~k~Ge  142 (147)
T d1v3va1          76 NSAFPAGSIVLA------------QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM-LNGANLGK  142 (147)
T ss_dssp             CTTSCTTCEEEE------------CCCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHH-HTTCCSSE
T ss_pred             CCcccCCCEEEE------------ccCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHh-hCCCCCCC
Confidence            788999999988            4789999999999999998765432     344555566664 4344 44457899


Q ss_pred             EEEE
Q 021628          153 SILV  156 (310)
Q Consensus       153 ~vlI  156 (310)
                      +|++
T Consensus       143 tvv~  146 (147)
T d1v3va1         143 AVVT  146 (147)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=2.1e-14  Score=95.20  Aligned_cols=73  Identities=29%  Similarity=0.378  Sum_probs=66.7

Q ss_pred             CChhhhccccchHHHHHHHH----HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC
Q 021628          124 LSFVEAASLPLATETAYEGL----ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA  197 (310)
Q Consensus       124 ~~~~~aa~~~~~~~ta~~al----~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~  197 (310)
                      +|+++|+.++++..|||.++    +....+++++|+|+|++|++|.+++|+++.+ |++|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~-G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKL-GYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHHCCC
Confidence            57899999999999999886    2466789999999999999999999999996 9999999999999999999874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.21  E-value=1.3e-06  Score=65.62  Aligned_cols=92  Identities=21%  Similarity=0.259  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--CEEeeCCCCcccccCCCccEEEeCCC---C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--DLAIDYTKENIEDLPEKFDVVFDAVG---Q  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~dvvi~~~g---~  224 (310)
                      +.-+|+|+| +|..|+.|+..|+.+ |++|.+.+.+.++++.+++...  ........+.+.+....+|+||.++-   .
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~l-GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhC-CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            457899999 999999999999997 9999999999999999976542  22233333333444558999999863   1


Q ss_pred             ------hHHHHhhcccCCEEEEEeC
Q 021628          225 ------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 ------~~~~~~~l~~~G~~v~~g~  243 (310)
                            .++.++.|++++.++.++.
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeec
Confidence                  2899999999999999954

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.17  E-value=3.9e-06  Score=63.80  Aligned_cols=92  Identities=22%  Similarity=0.316  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeC--CCCcc-------------------
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDY--TKENI-------------------  208 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~--~~~~~-------------------  208 (310)
                      +.-+|+|+| +|..|+.|+..|+.+ |++|.+.+.+.++++.+++++...+.-.  .....                   
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~l-GA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRL-GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHc-CCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            346899999 999999999999997 9999999999999999999886554210  00000                   


Q ss_pred             ---cccCCCccEEEeCC---CC------hHHHHhhcccCCEEEEEeC
Q 021628          209 ---EDLPEKFDVVFDAV---GQ------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       209 ---~~~~~~~dvvi~~~---g~------~~~~~~~l~~~G~~v~~g~  243 (310)
                         .+....+|+||.++   |.      .++.++.|++|+.++.++.
T Consensus       106 ~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence               00124789999986   21      2899999999999999853

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.85  E-value=8.5e-05  Score=58.50  Aligned_cols=98  Identities=23%  Similarity=0.305  Sum_probs=68.7

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHH----cCCCEE--eeCCCCcccccC
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRS----LGADLA--IDYTKENIEDLP  212 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~----~g~~~~--~~~~~~~~~~~~  212 (310)
                      ..++...+++|++||-+| +|. |..++.+++.. +  .+|+.++.+++..+.+++    .+...+  +..+........
T Consensus        66 ~~l~~l~l~~g~~VLdiG-~Gt-G~~s~~la~~~-~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~  142 (213)
T d1dl5a1          66 LFMEWVGLDKGMRVLEIG-GGT-GYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF  142 (213)
T ss_dssp             HHHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred             HHHHhhhccccceEEEec-Ccc-chhHHHHHHHh-CCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccc
Confidence            356788999999999999 554 88888999875 4  478888989988777743    343322  222211111123


Q ss_pred             CCccEEEeCCC--C-hHHHHhhcccCCEEEEE
Q 021628          213 EKFDVVFDAVG--Q-CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       213 ~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~  241 (310)
                      ..+|+|+...+  . ++..++.|+|||+++..
T Consensus       143 ~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            46999998765  2 47888999999999874

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.72  E-value=0.00011  Score=57.84  Aligned_cols=99  Identities=16%  Similarity=0.195  Sum_probs=71.1

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEEe--eCCCCcccccCCC
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLAI--DYTKENIEDLPEK  214 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~~--~~~~~~~~~~~~~  214 (310)
                      .+++...+++|++||..|  ++.|..++.+++.. |.+|+.++.+++-.+.+    ++++.+.+.  ..+..........
T Consensus        69 ~ml~~L~l~~g~~VLeIG--sGsGY~taila~l~-g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~p  145 (215)
T d1jg1a_          69 IMLEIANLKPGMNILEVG--TGSGWNAALISEIV-KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAP  145 (215)
T ss_dssp             HHHHHHTCCTTCCEEEEC--CTTSHHHHHHHHHH-CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred             HHHHhhccCccceEEEec--CCCChhHHHHHHhh-CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCc
Confidence            456788999999999998  66789999999886 87899999987755544    456755432  2221111122346


Q ss_pred             ccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628          215 FDVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       215 ~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g  242 (310)
                      +|.|+-+.+  . +...++.|++||+++..-
T Consensus       146 fD~Iiv~~a~~~ip~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         146 YDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ceeEEeecccccCCHHHHHhcCCCCEEEEEE
Confidence            999987655  2 478899999999998753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.55  E-value=0.00041  Score=54.75  Aligned_cols=98  Identities=19%  Similarity=0.202  Sum_probs=67.8

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-C-CC--EEeeCCCCcccccCCCccE
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-G-AD--LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-g-~~--~~~~~~~~~~~~~~~~~dv  217 (310)
                      +++...+++|++||-.| + +.|..++.+++.  +.+|+.++.+++..+.+++. . ..  .+...+..........+|.
T Consensus        62 ml~~L~l~~g~~VLdIG-~-GsGy~ta~La~l--~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~  137 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIG-T-GIGYYTALIAEI--VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDR  137 (224)
T ss_dssp             HHHHTTCCTTCEEEEEC-C-TTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEE
T ss_pred             HHHHhhhcccceEEEec-C-CCCHHHHHHHHH--hcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHH
Confidence            56788999999999998 3 478888888875  67899999999988877653 1 11  1222221111111245899


Q ss_pred             EEeCCC--C-hHHHHhhcccCCEEEEEeC
Q 021628          218 VFDAVG--Q-CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       218 vi~~~g--~-~~~~~~~l~~~G~~v~~g~  243 (310)
                      |+-+.+  . +...++.|++||+++..-+
T Consensus       138 Iiv~~a~~~ip~~l~~qLk~GGrLV~pvg  166 (224)
T d1vbfa_         138 VVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (224)
T ss_dssp             EEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             HHhhcchhhhhHHHHHhcCCCCEEEEEEc
Confidence            886654  2 4778899999999987643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.51  E-value=0.00011  Score=56.71  Aligned_cols=75  Identities=23%  Similarity=0.206  Sum_probs=54.5

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-c----CC-CEEeeCCC-CcccccCCCccEEEe
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-L----GA-DLAIDYTK-ENIEDLPEKFDVVFD  220 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~----g~-~~~~~~~~-~~~~~~~~~~dvvi~  220 (310)
                      --.|++|+|+|++|++|...+..+... |++|+++.+++++.+.+.+ +    .. ....+..+ .......+++|++|+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhh-ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            447899999999999999988877774 9999999999998766632 2    21 22233322 223334568999999


Q ss_pred             CCC
Q 021628          221 AVG  223 (310)
Q Consensus       221 ~~g  223 (310)
                      ++|
T Consensus        99 ~Ag  101 (191)
T d1luaa1          99 AGA  101 (191)
T ss_dssp             CCC
T ss_pred             cCc
Confidence            987

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00043  Score=55.51  Aligned_cols=73  Identities=26%  Similarity=0.342  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe--eCCCCc-c---cccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTKEN-I---EDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~~~-~---~~~~~~~dvvi~~~  222 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+ ++++....+  |-.+++ .   .+.-+..|++++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHAT-GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            6899999999999999988877764 99999999999998777 455432222  222211 1   11234789999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        85 g   85 (244)
T d1pr9a_          85 A   85 (244)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=0.0025  Score=51.54  Aligned_cols=117  Identities=21%  Similarity=0.176  Sum_probs=79.7

Q ss_pred             HHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCC-EE-eeCCCCcccccCCC
Q 021628          142 GLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGAD-LA-IDYTKENIEDLPEK  214 (310)
Q Consensus       142 al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~-~~-~~~~~~~~~~~~~~  214 (310)
                      .+...+++||++||=.| +|. |.++..+|+.++ +.+|+.++.+++..+.+++    ++.. .+ +...+.........
T Consensus        95 Ii~~l~i~pG~~VLDiG-~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~  172 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD  172 (266)
T ss_dssp             HHHHTTCCTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred             HHHhhCCCCCCEEEECC-CCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEeccccccccccc
Confidence            44688999999999998 444 788888888752 3589999999998877743    4532 22 22221111112346


Q ss_pred             ccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          215 FDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       215 ~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      +|.|+.-.+.    ++.+.+.|+|||+++.+.             ..-+.++++++.+++..+
T Consensus       173 ~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~-------------P~~~Qv~~~~~~l~~~gF  222 (266)
T d1o54a_         173 VDALFLDVPDPWNYIDKCWEALKGGGRFATVC-------------PTTNQVQETLKKLQELPF  222 (266)
T ss_dssp             EEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE-------------SSHHHHHHHHHHHHHSSE
T ss_pred             eeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe-------------CcccHHHHHHHHHHHCCc
Confidence            8887765553    488999999999999774             234566777777776554

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.0013  Score=51.88  Aligned_cols=100  Identities=15%  Similarity=0.142  Sum_probs=66.0

Q ss_pred             HHHHh--cccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCC-----C--EEeeCCCC
Q 021628          141 EGLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGA-----D--LAIDYTKE  206 (310)
Q Consensus       141 ~al~~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~-----~--~~~~~~~~  206 (310)
                      ++++.  ..++||++||-.|  .+.|..++.+|+..+ ..+|+.++.+++-.+.+++    .+.     .  .+...+..
T Consensus        65 ~~le~L~~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~  142 (224)
T d1i1na_          65 YALELLFDQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR  142 (224)
T ss_dssp             HHHHHTTTTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred             HHHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc
Confidence            35553  3789999999998  556888888888752 2478999999887766632    221     1  11111111


Q ss_pred             cccccCCCccEEEeCCC--C-hHHHHhhcccCCEEEEEe
Q 021628          207 NIEDLPEKFDVVFDAVG--Q-CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       207 ~~~~~~~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~g  242 (310)
                      ........||+|+.+..  . ++..++.|+|||+++..-
T Consensus       143 ~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         143 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence            11112346999987754  2 478899999999998753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00072  Score=50.79  Aligned_cols=74  Identities=15%  Similarity=0.227  Sum_probs=54.4

Q ss_pred             HHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEE
Q 021628          141 EGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       141 ~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvv  218 (310)
                      .+++.....++.+|+|+| +|+.+.+++..++.. |. ++.++.|+.++.+.+. .++...+ +..      ....+|++
T Consensus         7 ~~l~~~~~~~~~~vlIlG-aGGaarai~~aL~~~-g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~------~~~~~Dli   77 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHG-SGGMAKAVVAAFKNS-GFEKLKIYARNVKTGQYLAALYGYAYI-NSL------ENQQADIL   77 (167)
T ss_dssp             HHHHHTTCCTTSCEEEEC-SSTTHHHHHHHHHHT-TCCCEEEECSCHHHHHHHHHHHTCEEE-SCC------TTCCCSEE
T ss_pred             HHHHHcCCCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEecccHHHHHHHHHhhhhhhh-hcc------cccchhhh
Confidence            345666777889999999 899999999888885 75 7888899999887774 4554322 211      12368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      |+|++
T Consensus        78 INaTp   82 (167)
T d1npya1          78 VNVTS   82 (167)
T ss_dssp             EECSS
T ss_pred             eeccc
Confidence            99975

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.00061  Score=54.52  Aligned_cols=73  Identities=21%  Similarity=0.239  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe--eCCCCc-c---cccCCCccEEEeCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI--DYTKEN-I---EDLPEKFDVVFDAV  222 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~--~~~~~~-~---~~~~~~~dvvi~~~  222 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+ ++++....+  |-.+++ .   .+.-++.|++++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA   82 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHAS-GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence            5899999999999999988876664 99999999999888776 455432222  222211 1   11135789999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      |
T Consensus        83 g   83 (242)
T d1cyda_          83 A   83 (242)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.00068  Score=53.91  Aligned_cols=91  Identities=18%  Similarity=0.271  Sum_probs=69.2

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC---
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG---  223 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g---  223 (310)
                      ...++.+||=.| +| .|..+..+++.  |++|+.++.+++.++.+++-+....+..+.+++....+.+|+|+....   
T Consensus        39 ~~~~~~~vLDiG-cG-~G~~~~~l~~~--~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~~~~~~fD~ii~~~~~~~  114 (246)
T d2avna1          39 YLKNPCRVLDLG-GG-TGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLS  114 (246)
T ss_dssp             HCCSCCEEEEET-CT-TCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred             hcCCCCEEEEEC-CC-Cchhccccccc--ceEEEEeecccccccccccccccccccccccccccccccccceeeecchhh
Confidence            345778898888 55 79999999874  889999999999999998877655555554444444467999987643   


Q ss_pred             ---C----hHHHHhhcccCCEEEEE
Q 021628          224 ---Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       224 ---~----~~~~~~~l~~~G~~v~~  241 (310)
                         +    +++..+.|+|||.++..
T Consensus       115 ~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         115 YVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhHHHHHHHHHhhcCcCcEEEEE
Confidence               2    25777899999999754

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.23  E-value=0.0026  Score=51.92  Aligned_cols=95  Identities=15%  Similarity=0.193  Sum_probs=67.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +..+++||++||=+|  .+.|..++.+|+.. |++|+.+..++++.+.+++    .|...-+.....+.......+|.|+
T Consensus        56 ~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~-g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~fD~i~  132 (285)
T d1kpga_          56 GKLGLQPGMTLLDVG--CGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIV  132 (285)
T ss_dssp             TTTTCCTTCEEEEET--CTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEE
T ss_pred             HHcCCCCCCEEEEec--CcchHHHHHHHhcC-CcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccccccccee
Confidence            678999999999998  45688888999984 9999999999998887754    3321111111223334455788776


Q ss_pred             eC-----CCC------hHHHHhhcccCCEEEEE
Q 021628          220 DA-----VGQ------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       220 ~~-----~g~------~~~~~~~l~~~G~~v~~  241 (310)
                      ..     ++.      ++.+.+.|+|+|+++..
T Consensus       133 si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         133 SIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             eehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            43     232      26777899999999864

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.20  E-value=0.0031  Score=51.62  Aligned_cols=96  Identities=14%  Similarity=0.226  Sum_probs=66.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +..++++|++||=+| +| .|-.+..+|+.. |++|+.++.++++.+.++    +.|....+.....+.....+.+|.|+
T Consensus        55 ~~l~l~~G~~VLDiG-CG-~G~~~~~~a~~~-g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~fD~i~  131 (291)
T d1kpia_          55 DKLNLEPGMTLLDIG-CG-WGSTMRHAVAEY-DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIV  131 (291)
T ss_dssp             HTTCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEE
T ss_pred             HhcCCCCCCEEEEec-Cc-chHHHHHHHHhc-CcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccccccccceEe
Confidence            678999999999998 44 566778888884 999999999999866653    44533222222223333445799887


Q ss_pred             eC-----CCC-------------hHHHHhhcccCCEEEEEe
Q 021628          220 DA-----VGQ-------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~-----~g~-------------~~~~~~~l~~~G~~v~~g  242 (310)
                      ..     +++             ++.+.+.|+|||+++.-.
T Consensus       132 sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         132 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             EESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             echhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            43     221             256789999999998653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.19  E-value=0.00094  Score=52.62  Aligned_cols=96  Identities=19%  Similarity=0.285  Sum_probs=68.4

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcccccCCCcc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENIEDLPEKFD  216 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~d  216 (310)
                      ++.+.++++++||=+| +| .|..+..+++.  +.+++.++.+++..+.+++    .+.+.  ++..+.++.....+.+|
T Consensus         8 l~~~~l~~~~rVLDiG-cG-~G~~~~~l~~~--~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~~~~~fD   83 (231)
T d1vl5a_           8 MQIAALKGNEEVLDVA-TG-GGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFH   83 (231)
T ss_dssp             HHHHTCCSCCEEEEET-CT-TCHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEE
T ss_pred             HHhcCCCCcCEEEEec-cc-CcHHHHHHHHh--CCEEEEEECCHHHHhhhhhcccccccccccccccccccccccccccc
Confidence            4678999999999999 55 78888888765  7899999999987776643    44332  33333333333345799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     .    +.++.+.|+|||+++...
T Consensus        84 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          84 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9986643     2    378889999999999763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00044  Score=55.66  Aligned_cols=73  Identities=25%  Similarity=0.350  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH-cCCCEEeeCCCCcccc----------cCCCccEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS-LGADLAIDYTKENIED----------LPEKFDVV  218 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~----------~~~~~dvv  218 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+.+ ++....+..+-.+..+          .-.+.|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNS-GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5899999999999999988876664 9999999999999888854 4332222221111111          12368999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      ++++|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            98876

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.19  E-value=0.00051  Score=55.00  Aligned_cols=73  Identities=26%  Similarity=0.388  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-eeCCCCc-ccc-------cCCCccEEE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-IDYTKEN-IED-------LPEKFDVVF  219 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~~~~~~~-~~~-------~~~~~dvvi  219 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++...+ .|-.+++ ...       .-++.|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~-G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKE-GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            4789999999999999988877774 99999999999998877 44554332 2222211 111       123789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        83 nnAG   86 (242)
T d1ulsa_          83 HYAG   86 (242)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9887

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00071  Score=50.96  Aligned_cols=95  Identities=20%  Similarity=0.268  Sum_probs=60.3

Q ss_pred             HHHHh-cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCC---CEEeeCCCCcccccCCCc
Q 021628          141 EGLER-SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGA---DLAIDYTKENIEDLPEKF  215 (310)
Q Consensus       141 ~al~~-~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~~~~~~  215 (310)
                      ++++. .-..+|++|+|+| +|+.+.+++..+..+ |.+++++.|+.+|.+.+. .+..   ...+..+    ......+
T Consensus         7 ~~l~~~~~~~~~k~vlIlG-aGGaarai~~al~~~-g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~----~~~~~~~   80 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIG-AGGASRGVLLPLLSL-DCAVTITNRTVSRAEELAKLFAHTGSIQALSMD----ELEGHEF   80 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG----GGTTCCC
T ss_pred             HHHHHcCCCCCCCEEEEEC-CcHHHHHHHHHhccc-ceEEEeccchHHHHHHHHHHHhhcccccccccc----ccccccc
Confidence            34543 3345789999999 899999988888875 888889999999877764 3331   1122111    1123468


Q ss_pred             cEEEeCCCC-h-----HHHHhhcccCCEEEEE
Q 021628          216 DVVFDAVGQ-C-----DKALKAVKEGGRVVSI  241 (310)
Q Consensus       216 dvvi~~~g~-~-----~~~~~~l~~~G~~v~~  241 (310)
                      |++|+|++. .     ..-...+.++..++.+
T Consensus        81 dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~  112 (170)
T d1nyta1          81 DLIINATSSGISGDIPAIPSSLIHPGIYCYDM  112 (170)
T ss_dssp             SEEEECCSCGGGTCCCCCCGGGCCTTCEEEES
T ss_pred             ceeecccccCcccCCCCCcHHHhccCcEEEEe
Confidence            999999752 1     1123345555555544

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.07  E-value=0.0041  Score=50.62  Aligned_cols=95  Identities=16%  Similarity=0.289  Sum_probs=65.5

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +..+++||++||=+| +| .|..+..+++.. |++|+.++.+++..+.+++    .+....+.....+..+....+|.|+
T Consensus        46 ~~l~l~~g~~VLDiG-CG-~G~~a~~~a~~~-g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~~~~fD~i~  122 (280)
T d2fk8a1          46 DKLDLKPGMTLLDIG-CG-WGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIV  122 (280)
T ss_dssp             TTSCCCTTCEEEEES-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred             HHcCCCCCCEEEEec-CC-chHHHHHHHHhC-ceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhhccchhhhh
Confidence            567899999999999 55 345667788874 9999999999998877754    3432211112223344456788886


Q ss_pred             eC-----CC--C----hHHHHhhcccCCEEEEE
Q 021628          220 DA-----VG--Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       220 ~~-----~g--~----~~~~~~~l~~~G~~v~~  241 (310)
                      ..     ++  .    ++...+.|+|+|+++.-
T Consensus       123 si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         123 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             HhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            43     22  1    36678899999999864

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.06  E-value=0.002  Score=50.68  Aligned_cols=98  Identities=14%  Similarity=0.238  Sum_probs=62.2

Q ss_pred             HHHh--cccCCCCEEEEEcCCcchHHHHHHHHHhhc--C----CcEEEEecChhhHHHHHH---------cCCCE--Eee
Q 021628          142 GLER--SAFSAGKSILVLGGAGGVGTMVIQLAKHVF--G----ASKVAATSSTAKLDLLRS---------LGADL--AID  202 (310)
Q Consensus       142 al~~--~~~~~g~~vlI~g~~g~~G~~a~~la~~~~--g----~~vi~~~~~~~~~~~~~~---------~g~~~--~~~  202 (310)
                      +++.  ..+++|++||..|  .+.|..++.+++..+  |    .+|+.++.+++-.+.+++         ++...  +..
T Consensus        70 ~l~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          70 ALEYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            4543  3789999999998  456777777666541  2    378999888876555532         12111  222


Q ss_pred             CCCCcccccCCCccEEEeCCC--C-hHHHHhhcccCCEEEEE
Q 021628          203 YTKENIEDLPEKFDVVFDAVG--Q-CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       203 ~~~~~~~~~~~~~dvvi~~~g--~-~~~~~~~l~~~G~~v~~  241 (310)
                      .+..........||.|+-+.+  . ++..++.|++||+++..
T Consensus       148 ~d~~~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 GDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             SCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            221111112347998887665  2 47888999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.02  E-value=0.00077  Score=54.11  Aligned_cols=74  Identities=24%  Similarity=0.364  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE-eeCCCCc-ccc-------cCCCccEEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA-IDYTKEN-IED-------LPEKFDVVF  219 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~~~-------~~~~~dvvi  219 (310)
                      -.|+++||+|+++++|.+.++.+... |++|+++++++++.+..++.+...+ .|-.+++ ...       .-++.|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFARE-GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            36899999999999999988776664 9999999999998888888775432 2222111 111       124789999


Q ss_pred             eCCC
Q 021628          220 DAVG  223 (310)
Q Consensus       220 ~~~g  223 (310)
                      +++|
T Consensus        82 nnAG   85 (248)
T d2d1ya1          82 NNAA   85 (248)
T ss_dssp             ECCC
T ss_pred             EeCc
Confidence            9876

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.02  E-value=0.00051  Score=55.49  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEe---eCCCCc-ccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAI---DYTKEN-IED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~---~~~~~~-~~~-------~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++.....   |-.+++ ...       ...+.|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVRE-GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHT-TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5889999999999999988777764 99999999999887766 667755432   221111 110       1247899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        83 lVnnAg   88 (256)
T d1k2wa_          83 LVNNAA   88 (256)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            999887

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.01  E-value=0.00066  Score=54.36  Aligned_cols=73  Identities=23%  Similarity=0.289  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-e--eCCCCc-ccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTKEN-IED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~-~~~-------~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++.... +  |-.+++ ...       .-.+.|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAE-GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            6899999999999999988766664 99999999999988776 55653322 2  221111 110       1237899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        84 linnAG   89 (244)
T d1nffa_          84 LVNNAG   89 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.01  E-value=0.00065  Score=54.74  Aligned_cols=73  Identities=29%  Similarity=0.341  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCC-Ccccc----------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTK-ENIED----------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~----------~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++++.+ ++++...+.-..+ .+..+          .-.+.|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGE-GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6889999999999999988766664 99999999999988776 5677544332211 11111          1247899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        84 lVnnAG   89 (253)
T d1hxha_          84 LVNNAG   89 (253)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999987

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.01  E-value=0.00052  Score=56.08  Aligned_cols=73  Identities=25%  Similarity=0.390  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-e--eCCCCc-ccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTKEN-IED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~-~~~-------~~~~~dv  217 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++++.+ ++++.... +  |..+++ ...       .-..+|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAE-GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            5899999999999999988776664 99999999999988766 45664332 2  221111 111       1237899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        83 lvnnAG   88 (276)
T d1bdba_          83 LIPNAG   88 (276)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            998876

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.97  E-value=0.00069  Score=54.60  Aligned_cols=73  Identities=27%  Similarity=0.346  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-e--eCCCC-cccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTKE-NIED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~~-~~~~-------~~~~~dv  217 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+ ++++.... +  |-.++ +...       .-++.|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAA-GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            5899999999999999987766664 99999999999887766 55664322 2  22111 1111       1247899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        83 lVnnAg   88 (254)
T d1hdca_          83 LVNNAG   88 (254)
T ss_dssp             EEECCC
T ss_pred             EEecCc
Confidence            999887

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.93  E-value=0.004  Score=49.71  Aligned_cols=115  Identities=16%  Similarity=0.190  Sum_probs=74.3

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cC-CCEEeeCCCCcccc--cCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LG-ADLAIDYTKENIED--LPEK  214 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g-~~~~~~~~~~~~~~--~~~~  214 (310)
                      +...+++||++||=.| +| .|.++..+|+.++ +.+|+.++.+++..+.+++    ++ .+.+ +....+..+  ....
T Consensus        78 i~~l~i~pG~rVLEiG-~G-sG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~~~~~~~~  154 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIADFISDQM  154 (250)
T ss_dssp             ---CCCCTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTTCCCSCC
T ss_pred             HHHcCCCCcCEEEEee-ee-CcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeeecccccce
Confidence            3578899999999998 44 4777888888752 2479999999998888754    22 2222 111111111  1346


Q ss_pred             ccEEEeCCC----ChHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCe
Q 021628          215 FDVVFDAVG----QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKV  273 (310)
Q Consensus       215 ~dvvi~~~g----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (310)
                      +|.|+--.+    .+..+.+.|+|||+++.+..             .-+.+..+++.+++..+
T Consensus       155 fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P-------------~i~Qv~~~~~~l~~~gf  204 (250)
T d1yb2a1         155 YDAVIADIPDPWNHVQKIASMMKPGSVATFYLP-------------NFDQSEKTVLSLSASGM  204 (250)
T ss_dssp             EEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES-------------SHHHHHHHHHHSGGGTE
T ss_pred             eeeeeecCCchHHHHHHHHHhcCCCceEEEEeC-------------CcChHHHHHHHHHHCCC
Confidence            898875554    24889999999999998742             33556666666665444

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.93  E-value=0.00051  Score=55.87  Aligned_cols=46  Identities=28%  Similarity=0.455  Sum_probs=38.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG  196 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g  196 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+ +++.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~   51 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRY-GAKVVIADIADDHGQKVCNNIG   51 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhc
Confidence            6899999999999999988776664 99999999999988776 4444

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.0011  Score=53.09  Aligned_cols=73  Identities=25%  Similarity=0.383  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE---eeCCCCc-cc-------ccCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA---IDYTKEN-IE-------DLPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~---~~~~~~~-~~-------~~~~~~dv  217 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+ ++++....   .|-.+++ ..       +.-++.|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~-G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAAR-GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            5889999999999999988777664 99999999999988777 45553322   2222211 11       11247999


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        82 lVnnAg   87 (243)
T d1q7ba_          82 LVNNAG   87 (243)
T ss_dssp             EEECCC
T ss_pred             ehhhhh
Confidence            999876

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00082  Score=53.82  Aligned_cols=73  Identities=27%  Similarity=0.390  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEE--eeCCCCccc----ccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLA--IDYTKENIE----DLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~----~~~~~~dvvi~~~g  223 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+.+......  .+...+...    ....+.|+++++.|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFARE-GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            6899999999999999988877774 9999999999998887755432222  222211111    11347899999876

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.81  E-value=0.0062  Score=48.92  Aligned_cols=112  Identities=14%  Similarity=0.173  Sum_probs=75.0

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHHHH----c-C--CCEE--eeCCCCcccccC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLLRS----L-G--ADLA--IDYTKENIEDLP  212 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~~~----~-g--~~~~--~~~~~~~~~~~~  212 (310)
                      +...+++||++||=.|  .+.|.++..+|+.++. .+|+.++.+++..+.+++    + +  .+.+  ...+..+.....
T Consensus        89 i~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~  166 (264)
T d1i9ga_          89 VHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD  166 (264)
T ss_dssp             HHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred             HHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccC
Confidence            4678999999999998  4568888999998722 478999999998887754    2 1  2221  222111111123


Q ss_pred             CCccEEEeCCCC----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHH
Q 021628          213 EKFDVVFDAVGQ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFE  269 (310)
Q Consensus       213 ~~~dvvi~~~g~----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (310)
                      ..+|.||--.++    +..+.+.|+|+|+++.+.             ..-+..+.+++.++
T Consensus       167 ~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~-------------P~i~Qv~~~~~~l~  214 (264)
T d1i9ga_         167 GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV-------------ATVTQLSRIVEALR  214 (264)
T ss_dssp             TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE-------------SSHHHHHHHHHHHH
T ss_pred             CCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe-------------CccChHHHHHHHHH
Confidence            468977654543    478999999999999875             24455666666664

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0027  Score=50.66  Aligned_cols=73  Identities=19%  Similarity=0.275  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCE-EeeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADL-AIDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~----------~~~~  214 (310)
                      .|++++|+|+++++|...+..+... |++|+++++++++++.+.    +.|... .+..+-.+...          ..+.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~-G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKL-KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999866655554 999999999999877662    344332 22222111111          1347


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        85 idilinnag   93 (244)
T d1yb1a_          85 VSILVNNAG   93 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CceeEeecc
Confidence            999999987

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.77  E-value=0.0023  Score=52.44  Aligned_cols=73  Identities=22%  Similarity=0.351  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-H----HcCCCE-EeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-R----SLGADL-AIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~----~~g~~~-~~~~~~~~~~~----------~~~  213 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++++.+ +    +.+... .+..+-.+...          ...
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~-Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSL-GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5799999999999999988766664 99999999998876544 2    334332 22222111111          134


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++++++|
T Consensus       103 ~iDilvnnAg  112 (294)
T d1w6ua_         103 HPNIVINNAA  112 (294)
T ss_dssp             SCSEEEECCC
T ss_pred             ccchhhhhhh
Confidence            7899999986

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.76  E-value=0.0061  Score=49.46  Aligned_cols=96  Identities=15%  Similarity=0.103  Sum_probs=67.8

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d  216 (310)
                      ....+.+|++||=+| +| .|..+..+++.. +++|+.++.++...+.+++    .|..   .+...+-.++....+.+|
T Consensus        61 ~~~~l~~~~~vLDiG-cG-~G~~~~~la~~~-~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          61 MTGVLQRQAKGLDLG-AG-YGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HTTCCCTTCEEEEET-CT-TSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HhcCCCCCCEEEEeC-CC-CcHHHhhhhccC-CcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            456889999999998 44 677888888874 8999999999988776653    3322   223333333333345799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     +    +.++.+.|+|+|+++...
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            9986532     2    368889999999998764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.74  E-value=0.0031  Score=50.68  Aligned_cols=73  Identities=22%  Similarity=0.421  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-e--eCCCCc-cc-------ccC-C
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTKEN-IE-------DLP-E  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~-~~-------~~~-~  213 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++.+++++++.+    ++.+.... +  |..+++ ..       +.. .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~-G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGL-GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999988766663 99999999999886655    33454332 2  222211 10       112 3


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ..|++++++|
T Consensus        84 ~idilinnag   93 (258)
T d1ae1a_          84 KLNILVNNAG   93 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CcEEEecccc
Confidence            5899999887

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.74  E-value=0.0046  Score=48.73  Aligned_cols=95  Identities=15%  Similarity=0.256  Sum_probs=66.7

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC--EEeeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD--LAIDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~dv  217 (310)
                      +.+.++||++||=+|  .+.|..+..+++.  +.+++.++.+++.++.+++    .+.+  .++..+.++.....+.+|+
T Consensus        10 ~~~~~~~~~rILDiG--cGtG~~~~~la~~--~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~   85 (234)
T d1xxla_          10 KTAECRAEHRVLDIG--AGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI   85 (234)
T ss_dssp             HHHTCCTTCEEEEES--CTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred             HHhCCCCCCEEEEeC--CcCcHHHHHHHHh--CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccce
Confidence            678999999999998  4457888888874  6789999999988776643    3332  2222232333223456999


Q ss_pred             EEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          218 VFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      |+.+..     +    ++++.+.|+|+|+++...
T Consensus        86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            987533     2    378889999999998753

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.73  E-value=0.0034  Score=50.26  Aligned_cols=112  Identities=16%  Similarity=0.181  Sum_probs=72.8

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEe
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ...++|++||=.| +|. |.+++.+++.  |.+|+.++.+++..+.+++    .+.. .++..+..+ ....+.+|+|+.
T Consensus       116 ~~~~~g~~VLDiG-cGs-G~l~i~aa~~--g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~-~~~~~~fD~V~a  190 (254)
T d2nxca1         116 RHLRPGDKVLDLG-TGS-GVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVA  190 (254)
T ss_dssp             HHCCTTCEEEEET-CTT-SHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEE
T ss_pred             hhcCccCEEEEcc-cch-hHHHHHHHhc--CCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc-cccccccchhhh
Confidence            3468999999999 664 8888777663  8899999999998877753    3432 233322111 111347999986


Q ss_pred             CCC-C-----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          221 AVG-Q-----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       221 ~~g-~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                      ... +     .+...+.|+|||+++..|.             .......+.+.+.+..+..
T Consensus       191 ni~~~~l~~l~~~~~~~LkpGG~lilSgi-------------l~~~~~~v~~~~~~~Gf~~  238 (254)
T d2nxca1         191 NLYAELHAALAPRYREALVPGGRALLTGI-------------LKDRAPLVREAMAGAGFRP  238 (254)
T ss_dssp             ECCHHHHHHHHHHHHHHEEEEEEEEEEEE-------------EGGGHHHHHHHHHHTTCEE
T ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEec-------------chhhHHHHHHHHHHCCCEE
Confidence            643 2     2677789999999987652             1233455566666555543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00035  Score=54.37  Aligned_cols=91  Identities=18%  Similarity=0.205  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCCC---
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g~---  224 (310)
                      .++|+|+|++|.+|...+..+... |.+|++++|+++++......+.. ++..+-.+   +.....++|+||.+.|.   
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~   80 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEEcChhhcccccccccc-cccccccchhhHHHHhcCCCEEEEEeccCCc
Confidence            478999999999999988877764 99999999998886544333333 23222222   22234589999999862   


Q ss_pred             ----------hHHHHhhcccC--CEEEEEeC
Q 021628          225 ----------CDKALKAVKEG--GRVVSIIG  243 (310)
Q Consensus       225 ----------~~~~~~~l~~~--G~~v~~g~  243 (310)
                                ....++.++..  .+++.++.
T Consensus        81 ~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence                      12344444443  47777753

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0021  Score=51.73  Aligned_cols=73  Identities=19%  Similarity=0.327  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-eeCCCCcccc----------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-IDYTKENIED----------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~~~~~~~~~~----------~~~~  214 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++.+++++++.+    ++.|.... +..+-.+..+          ..++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATA-GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999988776664 99999999998887655    34554332 2221111111          1247


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        89 iDilvnnAG   97 (255)
T d1fmca_          89 VDILVNNAG   97 (255)
T ss_dssp             CCEEEECCC
T ss_pred             CCEeeeCCc
Confidence            899999887

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.68  E-value=0.002  Score=51.89  Aligned_cols=73  Identities=23%  Similarity=0.310  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEE-e--eCCCC-cccc-------cCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLA-I--DYTKE-NIED-------LPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~-~--~~~~~-~~~~-------~~~~  214 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++++.+.    +.|.+.. +  |-.++ +...       .-++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEE-GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999977766664 999999999998876653    3443322 2  21111 1111       1247


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        83 iDilVnnaG   91 (260)
T d1zema1          83 IDFLFNNAG   91 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCeehhhhc
Confidence            899998876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.67  E-value=0.0011  Score=53.35  Aligned_cols=73  Identities=15%  Similarity=0.232  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCC--C-EEeeCCCCcccc----------cCCCc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGA--D-LAIDYTKENIED----------LPEKF  215 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~--~-~~~~~~~~~~~~----------~~~~~  215 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++++.+ ++++.  . ..+..+-.+..+          .-++.
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEE-GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            5899999999999999987766664 99999999999888776 34431  1 222221111111          12478


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++++++|
T Consensus        84 DiLVnnAg   91 (251)
T d1zk4a1          84 STLVNNAG   91 (251)
T ss_dssp             CEEEECCC
T ss_pred             eEEEeccc
Confidence            99999886

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.65  E-value=0.0059  Score=47.42  Aligned_cols=90  Identities=17%  Similarity=0.166  Sum_probs=63.0

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEeCC
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ++++++||=+| +|. |..+..+++.  +.+++.++.+++.++.+++    .+.. ..+..+..++......+|+|+...
T Consensus        35 l~~~~~ILDiG-cG~-G~~~~~la~~--~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~  110 (226)
T d1ve3a1          35 MKKRGKVLDLA-CGV-GGFSFLLEDY--GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFID  110 (226)
T ss_dssp             CCSCCEEEEET-CTT-SHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEES
T ss_pred             cCCCCEEEEEC-CCc-chhhhhHhhh--hcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEec
Confidence            57889999998 554 8888888874  8899999999998877753    3322 223333333333346799998653


Q ss_pred             C-------C----hHHHHhhcccCCEEEEE
Q 021628          223 G-------Q----CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       223 g-------~----~~~~~~~l~~~G~~v~~  241 (310)
                      .       .    ++.+.+.|+|||+++..
T Consensus       111 ~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         111 SIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             chhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            3       1    26788899999998755

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0018  Score=52.10  Aligned_cols=42  Identities=24%  Similarity=0.431  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +|+++||+|+++++|.+.+..+... |++|+++.+++++++.+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~-G~~Vv~~~r~~~~l~~~   50 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQ-GLKVVGCARTVGNIEEL   50 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999977776664 99999999999887665

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.63  E-value=0.0037  Score=50.25  Aligned_cols=42  Identities=26%  Similarity=0.423  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|+++||+|+++++|.+.++.+... |++|++.++++++++.+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~   48 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASL-GASVYTCSRNQKELNDC   48 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            6899999999999999977766664 99999999999887665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.60  E-value=0.0092  Score=44.17  Aligned_cols=83  Identities=14%  Similarity=0.123  Sum_probs=59.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCCCC------h
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQ------C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g~------~  225 (310)
                      +|.|+| .|.+|...+..++.. |.+|++.++++++.+.+++.+. +...+.     .+..+.+|+||-|+..      +
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~-g~~V~~~d~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVERQLVDEAGQD-----LSLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTSCSEEESC-----GGGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHhhccceeeee-----cccccccccccccCcHhhhhhhh
Confidence            478899 899998777666664 9999999999999999988874 333221     1234678999998862      2


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      ++....+.++..++.++
T Consensus        75 ~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHGGGSCTTCEEEECC
T ss_pred             hhhhhhcccccceeecc
Confidence            55556666666666664

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.60  E-value=0.0022  Score=51.03  Aligned_cols=73  Identities=30%  Similarity=0.389  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEE-e--eCCCC-cccc-------cCCCccE
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLA-I--DYTKE-NIED-------LPEKFDV  217 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~-~--~~~~~-~~~~-------~~~~~dv  217 (310)
                      .|+++||+|+++++|.+.++-+... |++|+++.+++++++.+ ++++.+.. +  |-.++ +...       .-++.|+
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFARE-GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            6899999999999999988776664 99999999999987666 56775432 2  22111 1111       1246899


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      .|+++|
T Consensus        83 LinnAg   88 (241)
T d2a4ka1          83 VAHFAG   88 (241)
T ss_dssp             EEEGGG
T ss_pred             eccccc
Confidence            998876

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.59  E-value=0.0027  Score=50.90  Aligned_cols=73  Identities=26%  Similarity=0.375  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-----HHcCCCEE-e--eCCCCc-ccc-------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----RSLGADLA-I--DYTKEN-IED-------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-----~~~g~~~~-~--~~~~~~-~~~-------~~~  213 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++..     ++.|.... +  |-.+++ ...       ..+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEA-GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5889999999999999988776664 99999999998876544     33454332 2  222211 111       123


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      ++|++|+++|
T Consensus        83 ~iDiLVnnAG   92 (251)
T d1vl8a_          83 KLDTVVNAAG   92 (251)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.015  Score=42.75  Aligned_cols=91  Identities=18%  Similarity=0.210  Sum_probs=68.2

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-  224 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-  224 (310)
                      .-.-.|++|+|.| .|-+|...++.++.. |++|++++.++-+.-.+.--|.. +.     ...+.....|+++-++|+ 
T Consensus        19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~-G~~V~v~e~dp~~al~A~~dG~~-v~-----~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          19 DVMIAGKVAVVAG-YGDVGKGCAQALRGF-GARVIITEIDPINALQAAMEGYE-VT-----TMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHTTTCSEEEECSSCS
T ss_pred             CceecCCEEEEec-cccccHHHHHHHHhC-CCeeEeeecccchhHHhhcCceE-ee-----ehhhhhhhccEEEecCCCc
Confidence            3456899999999 999999999999996 99999999988665444333322 11     123334567999999984 


Q ss_pred             ---hHHHHhhcccCCEEEEEeCC
Q 021628          225 ---CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~  244 (310)
                         ..+-++.|+++..+...|..
T Consensus        91 ~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          91 DIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             CSBCHHHHTTCCTTEEEEECSSS
T ss_pred             cchhHHHHHhccCCeEEEEeccc
Confidence               27888999988888777643

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.56  E-value=0.00052  Score=54.60  Aligned_cols=70  Identities=21%  Similarity=0.347  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-eCCCC--cccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-DYTKE--NIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~~~~~--~~~~~~~~~dvvi~~~g  223 (310)
                      +|+++||+|+++++|.+.++.+... |++|+++++++++++.   .+...+. +-.+.  ...+..+.+|++++++|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~-Ga~V~~~~r~~~~l~~---~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG   75 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQE-GAEVTICARNEELLKR---SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   75 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHH---TCSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHh---cCCcEEEcchHHHHHHHHHHhCCCcEEEeccc
Confidence            5789999999999999988877764 9999999999876543   4433322 21111  11122357899998876

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0085  Score=47.46  Aligned_cols=95  Identities=22%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~d  216 (310)
                      ...+++||++||=+| + +.|..+..+++. .+++|+.++.+++..+.+++    .|..   .+...+-.+. ...+.+|
T Consensus        27 ~~~~l~pg~~VLDiG-C-G~G~~~~~la~~-~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD  102 (245)
T d1nkva_          27 RVLRMKPGTRILDLG-S-GSGEMLCTWARD-HGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANEKCD  102 (245)
T ss_dssp             HHTCCCTTCEEEEET-C-TTCHHHHHHHHH-TCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSSCEE
T ss_pred             HHcCCCCCCEEEEEc-C-CCCHHHHHHHHh-cCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccCcee
Confidence            688999999999998 3 446677788887 48999999999988776644    4532   2222222222 1235799


Q ss_pred             EEEeCCC-----C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG-----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g-----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +|+....     +    +.++.+.|+|||+++...
T Consensus       103 ~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_         103 VAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             EEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             EEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            9985422     2    367889999999998763

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.55  E-value=0.011  Score=44.29  Aligned_cols=88  Identities=20%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCC----------CcccccCCCccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTK----------ENIEDLPEKFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~dvvi~  220 (310)
                      ..++.|+| +|.+|.+.+..+... |.+|++.++++++.+.+++.+.........          .+..+..+.+|++|-
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            36899999 899999988887774 999999999999999887765322111110          111222357999999


Q ss_pred             CCCC--h----HHHHhhcccCCEEEE
Q 021628          221 AVGQ--C----DKALKAVKEGGRVVS  240 (310)
Q Consensus       221 ~~g~--~----~~~~~~l~~~G~~v~  240 (310)
                      ++..  .    ++....+.++-.++.
T Consensus        79 ~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          79 VVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             CSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEchhHHHHHHHHhhhccCCCCEEEE
Confidence            9873  2    445556666665543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.53  E-value=0.0051  Score=49.30  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-e--eCCCCc-cc-------ccCCCc
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-I--DYTKEN-IE-------DLPEKF  215 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~-~~-------~~~~~~  215 (310)
                      |+.+||+|+++++|.+.+..+... |++|+++++++++++.+    ++.+.... +  |-.+++ ..       +.-++.
T Consensus         2 gKValITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKE-GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            677899999999999977766664 99999999998887655    34454332 2  211111 11       112478


Q ss_pred             cEEEeCCC
Q 021628          216 DVVFDAVG  223 (310)
Q Consensus       216 dvvi~~~g  223 (310)
                      |++++++|
T Consensus        81 DilVnnAG   88 (257)
T d2rhca1          81 DVLVNNAG   88 (257)
T ss_dssp             SEEEECCC
T ss_pred             CEEEeccc
Confidence            99999987

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.49  E-value=0.0045  Score=49.49  Aligned_cols=73  Identities=16%  Similarity=0.287  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-eeCCCCccc----------ccCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-IDYTKENIE----------DLPEK  214 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~~~~~~~~~----------~~~~~  214 (310)
                      +++.+||+|+++++|.+.+..+... |++|+++++++++++.+    ++.|.... +..+-.+..          +.-++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~-Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKS-VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTT-SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5788999999999999988877664 99999999999887655    33454322 211111111          11347


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        88 iDilvnnag   96 (251)
T d2c07a1          88 VDILVNNAG   96 (251)
T ss_dssp             CCEEEECCC
T ss_pred             ceeeeeccc
Confidence            899998876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.44  E-value=0.0015  Score=49.22  Aligned_cols=90  Identities=19%  Similarity=0.214  Sum_probs=58.2

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC---CCEEeeCCCCcccccCCCccEEEeCC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG---ADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g---~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ...++.+|+|+| +|+.+.+++..+.. .+.+++++.|+.++.+.+ +.+.   .......+    ......+|++|+|+
T Consensus        14 ~~~~~k~vlIlG-aGGaarai~~aL~~-~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~----~~~~~~~diiIN~t   87 (171)
T d1p77a1          14 WLRPNQHVLILG-AGGATKGVLLPLLQ-AQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD----SIPLQTYDLVINAT   87 (171)
T ss_dssp             CCCTTCEEEEEC-CSHHHHTTHHHHHH-TTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----GCCCSCCSEEEECC
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHcc-cCceeeeccchHHHHHHHHHHHhhccccchhhhc----cccccccceeeecc
Confidence            345788999999 89999998887776 478999999999987776 3343   11222221    11235789999998


Q ss_pred             CC-h-----HHHHhhcccCCEEEEEe
Q 021628          223 GQ-C-----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g~-~-----~~~~~~l~~~G~~v~~g  242 (310)
                      +. .     ......+.++..++.+.
T Consensus        88 p~g~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          88 SAGLSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             CC-------CCCHHHHHHCSCEEESC
T ss_pred             cccccccccchhhhhhcccceeeeee
Confidence            62 1     11223345556565554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.44  E-value=0.0058  Score=45.16  Aligned_cols=75  Identities=27%  Similarity=0.386  Sum_probs=52.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ...--.+.+|+|+| +|.+|.+.+..+... |+ +++++.|+.++.+.+ ++++.. .....  ++.+....+|+||.|+
T Consensus        18 ~~~~l~~~~ilviG-aG~~g~~v~~~L~~~-g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~--~~~~~l~~~Divi~at   92 (159)
T d1gpja2          18 ELGSLHDKTVLVVG-AGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARDLGGE-AVRFD--ELVDHLARSDVVVSAT   92 (159)
T ss_dssp             HHSCCTTCEEEEES-CCHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHHHTCE-ECCGG--GHHHHHHTCSEEEECC
T ss_pred             HhCCcccCeEEEEC-CCHHHHHHHHHHHhc-CCcEEEEEcCcHHHHHHHHHhhhcc-cccch--hHHHHhccCCEEEEec
Confidence            33335788999999 799999999888875 87 577888888876544 677743 22221  2223335799999998


Q ss_pred             CC
Q 021628          223 GQ  224 (310)
Q Consensus       223 g~  224 (310)
                      ++
T Consensus        93 ss   94 (159)
T d1gpja2          93 AA   94 (159)
T ss_dssp             SS
T ss_pred             CC
Confidence            73

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.36  E-value=0.0045  Score=49.37  Aligned_cols=73  Identities=22%  Similarity=0.323  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh--HHHHHHcCCCEE-eeCCCCcccc----------cCCCcc
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK--LDLLRSLGADLA-IDYTKENIED----------LPEKFD  216 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~--~~~~~~~g~~~~-~~~~~~~~~~----------~~~~~d  216 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++  .+.+++.|.... +..+-.+..+          .-++.|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVE-GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999988877664 9999999986543  233466775432 2211111111          124789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++++++|
T Consensus        83 ilVnnAG   89 (247)
T d2ew8a1          83 ILVNNAG   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.36  E-value=0.0098  Score=45.02  Aligned_cols=95  Identities=14%  Similarity=0.121  Sum_probs=64.6

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-CE--EeeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-DL--AIDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~~--~~~~~~~~~~~~~~~~d  216 (310)
                      ...++++|++||=+|  .+.|..++.+|+.  +.+|+.++.+++..+.+++    .|. +.  ++..+..+.......+|
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~--~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D  102 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR--VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDID  102 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEE
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc--ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcC
Confidence            467889999999998  3446667777774  6689999999998877753    553 22  23332222222345789


Q ss_pred             EEEeCCC--C----hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVG--Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g--~----~~~~~~~l~~~G~~v~~g  242 (310)
                      .|+...+  .    ++.+.+.|+|+|+++...
T Consensus       103 ~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         103 IAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             EEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            8886643  2    367788999999998653

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.034  Score=45.84  Aligned_cols=112  Identities=20%  Similarity=0.213  Sum_probs=71.5

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHH----cC-----------CCEE--eeC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRS----LG-----------ADLA--IDY  203 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~----~g-----------~~~~--~~~  203 (310)
                      +...+++||++||=.| + +.|.++..+|+.+ |.  +|+.++.+++..+.+++    ++           .+.+  ...
T Consensus        91 l~~l~i~pG~rVLE~G-t-GsG~lt~~LAr~v-g~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~  167 (324)
T d2b25a1          91 LSMMDINPGDTVLEAG-S-GSGGMSLFLSKAV-GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  167 (324)
T ss_dssp             HHHHTCCTTCEEEEEC-C-TTSHHHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHhCCCCCCEEEEec-c-cccHHHHHHHHHh-CCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec
Confidence            4578899999999998 4 4499999999987 53  79999999998877743    11           1111  111


Q ss_pred             CCCcc--cccCCCccEEEeCCC----ChHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHc
Q 021628          204 TKENI--EDLPEKFDVVFDAVG----QCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFES  270 (310)
Q Consensus       204 ~~~~~--~~~~~~~dvvi~~~g----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (310)
                      +-.+.  ......+|.||--.+    .+.++.+.|+|||+++.+.             ..-+.+..+++.++.
T Consensus       168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~-------------P~i~Qv~~~~~~l~~  227 (324)
T d2b25a1         168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV-------------VNITQVIELLDGIRT  227 (324)
T ss_dssp             CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE-------------SSHHHHHHHHHHHHH
T ss_pred             chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe-------------CCHHHHHHHHHHHHH
Confidence            11111  111235787763333    2588999999999999875             233556666666653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.36  E-value=0.0043  Score=49.85  Aligned_cols=73  Identities=19%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-----HHcCCCEE-e--eCCCCc-cc-------ccCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-----RSLGADLA-I--DYTKEN-IE-------DLPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-----~~~g~~~~-~--~~~~~~-~~-------~~~~  213 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++++++++++.+     ++.|.+.. +  |-.+++ ..       +.-+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAA-GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999988876664 99999999988776443     33454332 2  222211 11       1134


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      +.|++++++|
T Consensus        87 ~iDilVnnAg   96 (260)
T d1h5qa_          87 PISGLIANAG   96 (260)
T ss_dssp             SEEEEEECCC
T ss_pred             CCcEeccccc
Confidence            7999999876

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0025  Score=51.60  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=37.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      -.|+++||+|+++++|.+.+..+... |++|+++.+++++++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~-G~~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKM-GAHVVVTARSKETLQKVV   55 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            46899999999999999977766664 999999999999887763

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.30  E-value=0.004  Score=50.02  Aligned_cols=95  Identities=25%  Similarity=0.318  Sum_probs=62.1

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCcccc----------
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIED----------  210 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~----------  210 (310)
                      ++-.|+++||+|+++++|.+.++.+... |++|++..+ +++..+.+    ++.|.+.. +..+-.+...          
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~-G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRR-GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence            3457999999999999999988776664 999998765 55544433    45665433 2222112111          


Q ss_pred             cCCCccEEEeCCCC----------------------------hHHHHhhcccCCEEEEEe
Q 021628          211 LPEKFDVVFDAVGQ----------------------------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       211 ~~~~~dvvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g  242 (310)
                      ...+.|++++++|.                            .+.++..|+.+|+++.+.
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            12368999998871                            045666778888887774

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.29  E-value=0.016  Score=42.40  Aligned_cols=90  Identities=19%  Similarity=0.180  Sum_probs=67.9

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~--  224 (310)
                      -.-.|++++|.| -|-+|...++-++.+ |++|+++..++-+.-++.--|.. +.     ...+..+..|+++-++|+  
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~-Ga~V~V~E~DPi~alqA~mdGf~-v~-----~~~~a~~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGL-GARVYITEIDPICAIQAVMEGFN-VV-----TLDEIVDKGDFFITCTGNVD   90 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSCHHHHHHHHTTTCE-EC-----CHHHHTTTCSEEEECCSSSS
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhC-CCEEEEEecCchhhHHHHhcCCc-cC-----chhHccccCcEEEEcCCCCc
Confidence            456899999999 999999999999997 99999999998664333222221 21     223345678999999995  


Q ss_pred             --hHHHHhhcccCCEEEEEeCC
Q 021628          225 --CDKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~  244 (310)
                        ..+-++.|+++..+...|..
T Consensus        91 vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          91 VIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             SBCHHHHTTCCTTCEEEECSST
T ss_pred             cccHHHHHHhhCCeEEEecccc
Confidence              26788999988888777743

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.21  E-value=0.0052  Score=49.41  Aligned_cols=73  Identities=22%  Similarity=0.358  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHH----HHHcCCCEE-e--eCCCCc-ccc-------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDL----LRSLGADLA-I--DYTKEN-IED-------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~----~~~~g~~~~-~--~~~~~~-~~~-------~~~  213 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++.++.+ +++.    +++.+.+.. +  |-.+++ ...       ..+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATE-KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5889999999999999977766664 999999998654 3333    345554432 2  222111 111       124


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      +.|++++++|
T Consensus        85 ~iDiLVnnAG   94 (261)
T d1geea_          85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEeeccce
Confidence            7899999886

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.19  E-value=0.008  Score=48.02  Aligned_cols=73  Identities=21%  Similarity=0.241  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhHHHHH----HcCCCEEeeCCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR----SLGADLAIDYTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~----------~~~  213 (310)
                      .|+++||+|++|  ++|.+.++.+... |++|++..++++..+.++    +.+....+..+-.+..+          .-.
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEA-GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            589999999877  7999877766664 999999888876555443    23333333322212111          124


Q ss_pred             CccEEEeCCC
Q 021628          214 KFDVVFDAVG  223 (310)
Q Consensus       214 ~~dvvi~~~g  223 (310)
                      +.|++++++|
T Consensus        86 ~iDilVnnag   95 (256)
T d1ulua_          86 GLDYLVHAIA   95 (256)
T ss_dssp             SEEEEEECCC
T ss_pred             CceEEEeccc
Confidence            7899998875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0041  Score=50.40  Aligned_cols=92  Identities=23%  Similarity=0.429  Sum_probs=60.9

Q ss_pred             CCEE-EEEcCCcchHHHHHH-HHHhhcCCcEEEEecChhhHHHH-H---HcCCC-EEeeCCCCcccc----------cCC
Q 021628          151 GKSI-LVLGGAGGVGTMVIQ-LAKHVFGASKVAATSSTAKLDLL-R---SLGAD-LAIDYTKENIED----------LPE  213 (310)
Q Consensus       151 g~~v-lI~g~~g~~G~~a~~-la~~~~g~~vi~~~~~~~~~~~~-~---~~g~~-~~~~~~~~~~~~----------~~~  213 (310)
                      |.+| ||+|+++++|++.+. +++. +|++|+++.+++++++.+ +   +.+.. ..+..+-.+..+          ..+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            5667 899999999998665 6666 489999999999987655 2   23432 222222111111          124


Q ss_pred             CccEEEeCCCC----------------------------hHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVGQ----------------------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ..|++|+++|.                            .+.++..|++.|+++.++.
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            79999999871                            0344567788899998853

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0071  Score=47.48  Aligned_cols=94  Identities=13%  Similarity=0.086  Sum_probs=63.7

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-CCEE----------------------e
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-ADLA----------------------I  201 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-~~~~----------------------~  201 (310)
                      ...+.++.+||..| +|. |..+..+|+.  |.+|+.++.+++..+.+++.. ....                      +
T Consensus        40 ~l~~~~~~rvLd~G-CG~-G~~a~~LA~~--G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          40 FLKGKSGLRVFFPL-CGK-AVEMKWFADR--GHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHTTCCSCEEEETT-CTT-CTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             hcCCCCCCEEEEeC-CCC-cHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            34567899999999 666 8889999885  999999999999988775432 1110                      0


Q ss_pred             eCCCCcc-cccCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEe
Q 021628          202 DYTKENI-EDLPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       202 ~~~~~~~-~~~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      ..+-... ......+|+|+++..  .         .....+.|+|+|+++...
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            0000000 112346899998753  1         157789999999987664

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.023  Score=44.79  Aligned_cols=92  Identities=22%  Similarity=0.262  Sum_probs=64.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvv  218 (310)
                      .....+++.+||=.| +|+ |..+..+++.  |++++.++.+++-++.+++    .+.. .+...+-.++. ..+.+|+|
T Consensus        35 ~~~~~~~~~~iLDiG-cGt-G~~~~~l~~~--~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-~~~~fD~I  109 (251)
T d1wzna1          35 KEDAKREVRRVLDLA-CGT-GIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAV  109 (251)
T ss_dssp             HHTCSSCCCEEEEET-CTT-CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEE
T ss_pred             HHhcCCCCCEEEEeC-CCC-Cccchhhccc--ceEEEEEeeccccccccccccccccccchheehhhhhcc-cccccchH
Confidence            445667788999999 665 8888888885  7899999999998887754    2322 23333323322 23579999


Q ss_pred             EeCCCC------------hHHHHhhcccCCEEEE
Q 021628          219 FDAVGQ------------CDKALKAVKEGGRVVS  240 (310)
Q Consensus       219 i~~~g~------------~~~~~~~l~~~G~~v~  240 (310)
                      +...++            ++.+.++|+|||+++.
T Consensus       110 ~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            876431            2577889999999975

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.12  E-value=0.011  Score=47.15  Aligned_cols=70  Identities=19%  Similarity=0.279  Sum_probs=47.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCCEE-eeCCCCcccc----------cCCCccE
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGADLA-IDYTKENIED----------LPEKFDV  217 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~~~-~~~~~~~~~~----------~~~~~dv  217 (310)
                      .+||+|+++++|.+.+..+... |++|+++++++++++.+    ++.|.... +..+-.+..+          .-++.|+
T Consensus         3 ValITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKD-GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEcCCccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4699999999999977766664 99999999999887655    34454332 2221111111          1347999


Q ss_pred             EEeCCC
Q 021628          218 VFDAVG  223 (310)
Q Consensus       218 vi~~~g  223 (310)
                      +++++|
T Consensus        82 lVnnAG   87 (255)
T d1gega_          82 IVNNAG   87 (255)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999886

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.10  E-value=0.0052  Score=49.03  Aligned_cols=72  Identities=17%  Similarity=0.250  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCC-C-EEeeCCCCcccc-------c-----CCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGA-D-LAIDYTKENIED-------L-----PEK  214 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~-~-~~~~~~~~~~~~-------~-----~~~  214 (310)
                      .++|||+|+++++|.+.++.+... |+  .|+.+.+++++++.+++... . +++..+-.+..+       .     ..+
T Consensus         3 ~KtilITGassGIG~a~a~~la~~-G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKD-KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC-CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            379999999999999977655543 64  68888999999888876542 2 222222111111       0     124


Q ss_pred             ccEEEeCCC
Q 021628          215 FDVVFDAVG  223 (310)
Q Consensus       215 ~dvvi~~~g  223 (310)
                      .|++++++|
T Consensus        82 idilinnAG   90 (250)
T d1yo6a1          82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             eEEEEEcCc
Confidence            899999987

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0052  Score=49.18  Aligned_cols=42  Identities=24%  Similarity=0.181  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~~~~~   43 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLK-GAKVALVDWNLEAGVQC   43 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            4889999999999999988877764 99999999999887665

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0053  Score=48.84  Aligned_cols=48  Identities=25%  Similarity=0.343  Sum_probs=39.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGAD  198 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~  198 (310)
                      +|+++||+|+++++|.+.++-+... |++|+++++++++++.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQ-GASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999977776664 99999999988887666 566643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.92  E-value=0.0098  Score=44.98  Aligned_cols=95  Identities=14%  Similarity=0.032  Sum_probs=63.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-C-CEE--------eeCCCCcc-----
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-A-DLA--------IDYTKENI-----  208 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-~-~~~--------~~~~~~~~-----  208 (310)
                      ....+.||.+||..| +| .|..+..+|+.  |.+|+.++.+++.++.+++.. . ...        .+.....+     
T Consensus        14 ~~l~~~~~~rvLd~G-CG-~G~~a~~la~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          14 SSLNVVPGARVLVPL-CG-KSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHCCCTTCEEEETT-TC-CSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHcCCCCCCEEEEec-Cc-CCHHHHHHHHc--CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            345688999999998 44 57888888874  999999999999999886531 1 110        01110000     


Q ss_pred             cc----cCCCccEEEeCCC--C---------hHHHHhhcccCCEEEEEe
Q 021628          209 ED----LPEKFDVVFDAVG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       209 ~~----~~~~~dvvi~~~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      .+    ....+|+|++...  .         ...+.+.|+|+|+++...
T Consensus        90 ~~l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            00    1135789887543  1         257778999999987653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.84  E-value=0.0054  Score=49.69  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=36.4

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~   44 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKE-GAQVTITGRNEDRLEET   44 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5899999999999999977766664 99999999999887665

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.84  E-value=0.0054  Score=49.62  Aligned_cols=42  Identities=21%  Similarity=0.410  Sum_probs=36.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++++|+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~-Ga~V~l~~r~~~~l~~~   45 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQE-GANVTITGRSSERLEET   45 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999988776664 99999999999987766

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.83  E-value=0.024  Score=40.08  Aligned_cols=69  Identities=20%  Similarity=0.203  Sum_probs=50.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCccc---c-cCCCccEEEeCCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIE---D-LPEKFDVVFDAVGQ  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~---~-~~~~~dvvi~~~g~  224 (310)
                      +|+|.| .|.+|...++.+... |.+|++++.++++.+.+. +++.. ++..+..+..   . ..+.+|.++.++++
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~-g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHC-CCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCc
Confidence            589999 799999999888885 999999999999998885 45654 3433322211   1 23578999988874

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.82  E-value=0.029  Score=42.39  Aligned_cols=105  Identities=19%  Similarity=0.200  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .+.++.|.| .|.+|...++.++.. |.+|+..++........++.+....     .+..+..+..|+|.-+.+.     
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~~~l~~sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPF-DVHLHYTDRHRLPESVEKELNLTWH-----ATREDMYPVCDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGG-TCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHGGGCSEEEECSCCCTTTT
T ss_pred             cccceeecc-ccccchhhhhhhhcc-CceEEEEeecccccccccccccccc-----CCHHHHHHhccchhhcccccccch
Confidence            578999999 999999999999995 9999999986655555554443211     1223344578888877651     


Q ss_pred             ---hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHH--HHHHHHHHHHcCCeeE
Q 021628          225 ---CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS--ILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  275 (310)
                         -.+.++.|+++..+|.++              +++  +-+++++.+.++++.-
T Consensus       116 ~li~~~~l~~mk~ga~lIN~a--------------RG~ivd~~aL~~aL~~g~i~g  157 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNTA--------------RGKLCDRDAVARALESGRLAG  157 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS--------------CGGGBCHHHHHHHHHTTSEEE
T ss_pred             hhhHHHHHHhCCCCCEEEecC--------------chhhhhHHHHHHHHhCCCcee
Confidence               178899999999888876              333  3467788899999873

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.82  E-value=0.08  Score=36.12  Aligned_cols=89  Identities=13%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---  225 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---  225 (310)
                      .|.+|+|.| .|.+|..-+..+... |+++++++.... ....+.+-+.-......- . .....++++|+.+.++.   
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~-ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~dl~~~~lv~~at~d~~~n   86 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEA-GARLTVNALTFIPQFTVWANEGMLTLVEGPF-D-ETLLDSCWLAIAATDDDTVN   86 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHT-TBEEEEEESSCCHHHHHHHTTTSCEEEESSC-C-GGGGTTCSEEEECCSCHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHC-CCeEEEEeccCChHHHHHHhcCCceeeccCC-C-HHHhCCCcEEeecCCCHHHH
Confidence            478999999 899999988888884 999988876332 222222222222222111 1 11235789999998752   


Q ss_pred             HHHHhhcccCCEEEEEe
Q 021628          226 DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g  242 (310)
                      .+..+..++.|.++.+.
T Consensus        87 ~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          87 QRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             HHHHHHHHHTTCEEEET
T ss_pred             HHHHHHHHHcCCEEEeC
Confidence            56677888888888764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.81  E-value=0.014  Score=44.58  Aligned_cols=102  Identities=20%  Similarity=0.261  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...+++++.. |.+|++.+.........  .+.      ...++.+.....|+++.+.+.     
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~f-g~~V~~~d~~~~~~~~~--~~~------~~~~l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGF-GAKVITYDIFRNPELEK--KGY------YVDSLDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHH--TTC------BCSCHHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEec-ccccchhHHHhHhhh-cccccccCccccccccc--cee------eeccccccccccccccccCCcccccc
Confidence            478999999 999999999999995 99999998754433221  111      111233334567888887651     


Q ss_pred             --h-HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHH--HHHHHHHHHHcCCeeE
Q 021628          225 --C-DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGS--ILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 --~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  275 (310)
                        + .+.++.|+++..+|.++              +++  +-+++++.+.++++.-
T Consensus       112 ~li~~~~l~~mk~~a~lIN~s--------------RG~ivde~aL~~aL~~~~i~~  153 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVS--------------RGPLVDTDAVIRGLDSGKIFG  153 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECS--------------CGGGBCHHHHHHHHHHTSEEE
T ss_pred             ccccHHHHhhhCCccEEEecC--------------chhhhhhHHHHHHHhcccchh
Confidence              1 68889999999998886              333  3456788899998863

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.79  E-value=0.006  Score=48.96  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=36.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      +|+++||+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~l~~~   48 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGF-GAVIHTCARNEYELNEC   48 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5899999999999999988776664 99999999999887665

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.76  E-value=0.0083  Score=48.10  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++++|+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~-Ga~V~i~~r~~~~l~~~   44 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAE-GAKLSLVDVSSEGLEAS   44 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            5789999999999999987776664 99999999999887655

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.75  E-value=0.012  Score=47.37  Aligned_cols=93  Identities=25%  Similarity=0.356  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC-hhhHHH----HHHcCCCEEee-CCCCcccc----------cCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS-TAKLDL----LRSLGADLAID-YTKENIED----------LPE  213 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~-~~~~~~----~~~~g~~~~~~-~~~~~~~~----------~~~  213 (310)
                      .|+++||+|+++++|.+.++.+... |++|++++++ ++.++.    +++.+.+.... .+-.+...          ...
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRR-GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999988877774 9999998875 444333    34555543322 22111111          124


Q ss_pred             CccEEEeCCCC----------------------------hHHHHhhcccCCEEEEEeC
Q 021628          214 KFDVVFDAVGQ----------------------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       214 ~~dvvi~~~g~----------------------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      +.|+++++.|.                            .+.++..|...|+++.++.
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence            68999988761                            0455667788899888753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.74  E-value=0.014  Score=43.31  Aligned_cols=90  Identities=18%  Similarity=0.165  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCC-c---ccccCCCccEEEeCCCC--
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKE-N---IEDLPEKFDVVFDAVGQ--  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-~---~~~~~~~~dvvi~~~g~--  224 (310)
                      +++|+|+| +|.+|..++..+... |.+|++++++.++.+.+.+-........... .   ........|+++.+.+.  
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~-g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~   79 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF   79 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT-TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC-CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchh
Confidence            57899999 799999988877774 8999999999999988855332222222111 1   11223467888887763  


Q ss_pred             -hHHHHhhcccCCEEEEEe
Q 021628          225 -CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 -~~~~~~~l~~~G~~v~~g  242 (310)
                       ......++..+-.++...
T Consensus        80 ~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          80 HATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             HHHHHHHHHHHTCEEECSS
T ss_pred             hhHHHHHHHhhccceeecc
Confidence             233334455555555443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.67  E-value=0.017  Score=47.38  Aligned_cols=73  Identities=25%  Similarity=0.350  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh---------hhHHHH-H---HcCCCEEeeCCCCc-ccc-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST---------AKLDLL-R---SLGADLAIDYTKEN-IED-----  210 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~---------~~~~~~-~---~~g~~~~~~~~~~~-~~~-----  210 (310)
                      .|+++||+|+++++|.+.+..+... |++|++.+++.         ++++.+ +   ..+.....+..+.+ ...     
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~-Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAER-GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            5899999999999999977766664 99999986543         233322 2   23333344433322 111     


Q ss_pred             --cCCCccEEEeCCC
Q 021628          211 --LPEKFDVVFDAVG  223 (310)
Q Consensus       211 --~~~~~dvvi~~~g  223 (310)
                        .-++.|++|+++|
T Consensus        85 ~~~~G~iDiLVnNAG   99 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAG   99 (302)
T ss_dssp             HHHTSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCc
Confidence              1347999999987

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.65  E-value=0.02  Score=40.53  Aligned_cols=70  Identities=23%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee-CCCCcc-cc-cCCCccEEEeCCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID-YTKENI-ED-LPEKFDVVFDAVGQ  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~-~~~~~dvvi~~~g~  224 (310)
                      +++|.| .|.+|...++.+... |.++++++.++++.+.+++.+...++. ..+++. .. ....+|.++-+.++
T Consensus         2 ~~iIiG-~G~~G~~la~~L~~~-g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIG-LGRFGGSIVKELHRM-GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHC-CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence            578889 899999999988885 999999999999999998877654442 222211 11 13468888888763

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=95.59  E-value=0.008  Score=48.05  Aligned_cols=42  Identities=12%  Similarity=0.190  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|++|+|+|+++++|.+.+..+... |++|+++.++.++.+.+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~-G~~vii~~r~~~~~~~~   45 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKR-NLKNFVILDRVENPTAL   45 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-CCSEEEEEESSCCHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCcccHHHH
Confidence            5899999999999999977766664 99999998866655444

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.01  Score=48.64  Aligned_cols=43  Identities=26%  Similarity=0.457  Sum_probs=36.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      -.|+++||+|+++++|.+.++.+... |++|+++++++++++.+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~-Ga~Vvi~~r~~~~l~~~   52 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLEL-GSNVVIASRKLERLKSA   52 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            47899999999999999988766664 99999999998887655

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.56  E-value=0.0082  Score=48.27  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|+.+||+|+++++|.+.+..+... |++|+++++++++++.+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~-Ga~V~~~~r~~~~l~~~   45 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFARE-GAKVTITGRHAERLEET   45 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHH
Confidence            6889999999999999977766664 99999999999887665

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.55  E-value=0.01  Score=47.09  Aligned_cols=43  Identities=16%  Similarity=0.194  Sum_probs=33.5

Q ss_pred             CEEEEEcCCcchHHHHHHHH-H-hhcCCcEEEEecChhhHHHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLA-K-HVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la-~-~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      ++|||+|+++++|.+.++.+ + ...|++|+++.+++++++.+++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~   47 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED   47 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            58999999999999977643 3 1138899999999988766643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.54  E-value=0.012  Score=47.01  Aligned_cols=73  Identities=21%  Similarity=0.352  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh-hhHHHH-----HHcCCCEEe---eCCCC-cccc-------cC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST-AKLDLL-----RSLGADLAI---DYTKE-NIED-------LP  212 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~-~~~~~~-----~~~g~~~~~---~~~~~-~~~~-------~~  212 (310)
                      .|+++||+|+++++|.+.+..+... |++|+++.+++ ++++.+     ++.+.....   |-.++ +...       .-
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~-Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQ-GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5889999999999999977766664 99999999864 444433     223443322   21111 1111       12


Q ss_pred             CCccEEEeCCC
Q 021628          213 EKFDVVFDAVG  223 (310)
Q Consensus       213 ~~~dvvi~~~g  223 (310)
                      .+.|++|+++|
T Consensus        82 G~iDiLVnnAG   92 (260)
T d1x1ta1          82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCcEEEeecc
Confidence            47899999987

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.54  E-value=0.0088  Score=49.88  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-----CC--EEeeC---CCCcccccCCCcc
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-----AD--LAIDY---TKENIEDLPEKFD  216 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-----~~--~~~~~---~~~~~~~~~~~~d  216 (310)
                      -+.+|++|||+|++|-+|...+..+... |.+|++++++.++...++++.     ..  ..+..   +...+.....++|
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~-G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEH-GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            3567999999999999999888766664 999999999887766554321     11  11211   1223334456889


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      .++.+..
T Consensus        86 ~v~~~a~   92 (342)
T d1y1pa1          86 GVAHIAS   92 (342)
T ss_dssp             EEEECCC
T ss_pred             hhhhhcc
Confidence            9998764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.52  E-value=0.047  Score=39.96  Aligned_cols=104  Identities=13%  Similarity=0.208  Sum_probs=69.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---H---
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D---  226 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~---  226 (310)
                      +|-++| .|.+|...+.-+... |.+|++.++++++.+.+.+.+... .+    +..+..+.+|++|-|.++.   +   
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~-~~----~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAAGAET-AS----TAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEE-CS----SHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHC-CCeEEEEeCCcchhHHHHHhhhhh-cc----cHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            477889 899998866654443 999999999999999998877532 21    2233345789999998742   2   


Q ss_pred             ----HHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          227 ----KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       227 ----~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                          .....+.++..++.++.            ...+...+..+.+.+..+..
T Consensus        75 ~~~~~~~~~~~~g~iiid~sT------------~~p~~~~~~~~~~~~~g~~~  115 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMSS------------IAPLASREISDALKAKGVEM  115 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECSC------------CCHHHHHHHHHHHHTTTCEE
T ss_pred             hCCcchhhccCCCCEEEECCC------------CCHHHHHHHHHHHHHcCCce
Confidence                24455666667766642            34555566666666655543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.012  Score=44.43  Aligned_cols=92  Identities=15%  Similarity=0.194  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH----HHcC----C-CEEeeCCC-CcccccCCCccE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL----RSLG----A-DLAIDYTK-ENIEDLPEKFDV  217 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~----~~~g----~-~~~~~~~~-~~~~~~~~~~dv  217 (310)
                      -.+.+|+|+| +|+.+.+++..+... |. +++++.+++++.+.+    ++++    . ..+.+..+ +.+......+|+
T Consensus        16 l~~k~vlIlG-aGGaarai~~al~~~-g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          16 IKGKTMVLLG-AGGASTAIGAQGAIE-GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHhhc-CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            3678999999 899999988877775 66 566778887765543    2222    1 11222222 112222347899


Q ss_pred             EEeCCCC-h--------HHHHhhcccCCEEEEEe
Q 021628          218 VFDAVGQ-C--------DKALKAVKEGGRVVSII  242 (310)
Q Consensus       218 vi~~~g~-~--------~~~~~~l~~~G~~v~~g  242 (310)
                      +|+|++. .        ..-+..+.++..++.+-
T Consensus        94 iIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~  127 (182)
T d1vi2a1          94 LTNGTKVGMKPLENESLVNDISLLHPGLLVTECV  127 (182)
T ss_dssp             EEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred             eccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence            9999751 1        11235567777777764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.43  E-value=0.008  Score=45.19  Aligned_cols=72  Identities=17%  Similarity=0.271  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcC----CCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLG----ADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      -.+++|+|+| +|+.+.+++..+... + ++.+..|+.++.+.+ .++.    .......+-.+.......+|++++|++
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~-~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp   92 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKD-N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP   92 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSS-S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHccc-c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence            4788999999 899999877766553 4 788889998887665 2232    211100011122223456899999975

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.37  E-value=0.0045  Score=49.52  Aligned_cols=42  Identities=14%  Similarity=0.024  Sum_probs=35.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL  195 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~  195 (310)
                      |+||+|+++++|++.+.-+... |++|++.+++.++++.+++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~-Ga~V~i~~r~~~~~~~~~~~   43 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEA-GHTVACHDESFKQKDELEAF   43 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT-TCEEEECCGGGGSHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhh
Confidence            7899999999999977766654 99999999988888777553

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.36  E-value=0.074  Score=39.09  Aligned_cols=87  Identities=15%  Similarity=0.112  Sum_probs=60.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      .+|+|.| .|.+|...+..++.. |  .+|++.+++++.++.+++.+. +.......   .......|+|+-|+..    
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~-g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~dlIila~p~~~~~   76 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDLGIIDEGTTSIA---KVEDFSPDFVMLSSPVRTFR   76 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG---GGGGTCCSEEEECSCHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhc-CCCeEEEEEECChHHHHHHHHhhcchhhhhhhh---hhhccccccccccCCchhhh
Confidence            3689999 899998777666653 5  478889999999999998884 44432211   1112367899988872    


Q ss_pred             --hHHHHhhcccCCEEEEEeC
Q 021628          225 --CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~  243 (310)
                        ++.....+.++..++.++.
T Consensus        77 ~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          77 EIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhhcccccccccccccc
Confidence              2455567777777777753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.31  E-value=0.018  Score=43.28  Aligned_cols=100  Identities=15%  Similarity=0.093  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...+++++.. |.+|++.++++.+.       ....    ..++.+.....|+|+.+.+.     
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~-g~~v~~~d~~~~~~-------~~~~----~~~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAAL-GAQVRGFSRTPKEG-------PWRF----TNSLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHT-TCEEEEECSSCCCS-------SSCC----BSCSHHHHTTCSEEEECCCCSTTTT
T ss_pred             cCceEEEec-cccccccceeeeecc-cccccccccccccc-------ceee----eechhhhhhccchhhcccccccccc
Confidence            478999999 999999999999995 99999998864321       1111    12344455678999887751     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                       +  ...++.|+++..++.++.-.            --+-+++++.+.++++.
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~------------ivd~~aL~~aL~~~~i~  148 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAE------------VLDRDGVLRILKERPQF  148 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGG------------GBCHHHHHHHHHHCTTC
T ss_pred             cccccceeeeccccceEEeccccc------------cccchhhhhhcccCcEE
Confidence             1  78899999999999886211            11345667788888875

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.31  E-value=0.029  Score=42.51  Aligned_cols=104  Identities=16%  Similarity=0.202  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC------
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ------  224 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~------  224 (310)
                      |.++.|+| .|.+|...+++++.. |.+++..+............+...     .+++.+.....|+|..+.+.      
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~~~~~~~~~-----~~~l~~ll~~sD~v~l~~plt~~T~~  119 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGF-DMDIDYFDTHRASSSDEASYQATF-----HDSLDSLLSVSQFFSLNAPSTPETRY  119 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSCCCHHHHHHHTCEE-----CSSHHHHHHHCSEEEECCCCCTTTTT
T ss_pred             ccceEEee-cccchHHHHHHHHhh-ccccccccccccccchhhcccccc-----cCCHHHHHhhCCeEEecCCCCchHhh
Confidence            78999999 999999999999995 999999987555433332222111     11233334567888877641      


Q ss_pred             h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHH--HHHHHHHHHcCCeeE
Q 021628          225 C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSI--LEKLNPYFESGKVKA  275 (310)
Q Consensus       225 ~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  275 (310)
                      +  ...++.|+++..+|.++              +++.  -+++++.+.++++.-
T Consensus       120 li~~~~l~~mk~~a~lIN~s--------------RG~ivde~aL~~aL~~g~i~~  160 (191)
T d1gdha1         120 FFNKATIKSLPQGAIVVNTA--------------RGDLVDNELVVAALEAGRLAY  160 (191)
T ss_dssp             CBSHHHHTTSCTTEEEEECS--------------CGGGBCHHHHHHHHHHTSEEE
T ss_pred             eecHHHhhCcCCccEEEecC--------------CccchhhHHHHHHHHcCCceE
Confidence            1  68889999999999886              3333  456788899999873

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.30  E-value=0.028  Score=42.99  Aligned_cols=77  Identities=25%  Similarity=0.360  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCC-CC-h-
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAV-GQ-C-  225 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~-g~-~-  225 (310)
                      -.|.+|+|.| .|.+|..+++++... |+++++.+.+.++......++...+ ..+    ......+|+++=|+ +. + 
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~-Gakvvv~d~d~~~~~~~~~~g~~~~-~~~----~~~~~~~DI~iPcA~~~~I~   97 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEA-GAQLLVADTDTERVAHAVALGHTAV-ALE----DVLSTPCDVFAPCAMGGVIT   97 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEEC-CGG----GGGGCCCSEEEECSCSCCBC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEecchHHHHHHHHhhccccc-Ccc----ccccccceeeeccccccccc
Confidence            4788999999 999999999999996 9999999999999988888876433 111    11223678887665 32 2 


Q ss_pred             HHHHhhc
Q 021628          226 DKALKAV  232 (310)
Q Consensus       226 ~~~~~~l  232 (310)
                      ...++.+
T Consensus        98 ~~~a~~i  104 (201)
T d1c1da1          98 TEVARTL  104 (201)
T ss_dssp             HHHHHHC
T ss_pred             HHHHhhh
Confidence            4455555

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.16  E-value=0.036  Score=43.59  Aligned_cols=87  Identities=20%  Similarity=0.202  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .++++||=+| +| .|..+..+++.  |.+++.++.+++.++.+++    .+.. .++..+-.++. ..+.+|+|+...+
T Consensus        36 ~~~~~vLDiG-CG-~G~~~~~l~~~--g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLA-CG-TGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-INRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEET-CT-TSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CSCCEEEEEECTT
T ss_pred             CCCCeEEEEe-Cc-CCHHHHHHHHh--CCccEeeccchhhhhhccccccccCccceeeccchhhhc-ccccccccceeee
Confidence            4457899998 55 67788888875  8899999999998877743    3322 22222222222 2457999986533


Q ss_pred             ------C-------hHHHHhhcccCCEEEE
Q 021628          224 ------Q-------CDKALKAVKEGGRVVS  240 (310)
Q Consensus       224 ------~-------~~~~~~~l~~~G~~v~  240 (310)
                            +       ++.+.++|+|+|.++.
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence                  1       2567789999999985

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.091  Score=40.83  Aligned_cols=97  Identities=27%  Similarity=0.255  Sum_probs=65.6

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHHc----CCCEEeeCCCC---cccccCCC
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRSL----GADLAIDYTKE---NIEDLPEK  214 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~~----g~~~~~~~~~~---~~~~~~~~  214 (310)
                      ++...++||++||=+|  .+.|..+..+++..+ .-+|++++.+++..+.+++.    +....+..+..   .+......
T Consensus        66 l~~l~i~pG~~VLDlG--aGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~  143 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLG--IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPK  143 (227)
T ss_dssp             CCCCCCCTTCEEEEET--TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             ccccccCCCCEEEEec--cCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccc
Confidence            4567899999999998  345888888998862 24799999999988877542    21122222221   12223457


Q ss_pred             ccEEEeCCCC-------hHHHHhhcccCCEEEEE
Q 021628          215 FDVVFDAVGQ-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       215 ~dvvi~~~g~-------~~~~~~~l~~~G~~v~~  241 (310)
                      +|+++.....       +..+.+.|+++|+++..
T Consensus       144 vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            8888765431       36777899999999865

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.1  Score=42.57  Aligned_cols=92  Identities=25%  Similarity=0.263  Sum_probs=57.0

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHH---HHHcCC-C--EEeeCCCCcccccCCCccEE
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDL---LRSLGA-D--LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~---~~~~g~-~--~~~~~~~~~~~~~~~~~dvv  218 (310)
                      .....+|++||-+| +| .|.+++.+|+. +..+|++++.++.-...   .++.+. +  .++..+..++......+|+|
T Consensus        30 ~~~~~~~~~VLDiG-cG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~D~I  106 (311)
T d2fyta1          30 NPHIFKDKVVLDVG-CG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVI  106 (311)
T ss_dssp             CGGGTTTCEEEEET-CT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEE
T ss_pred             ccccCCcCEEEEEC-CC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCccccceEE
Confidence            44667899999999 66 78888888886 23478888887754322   233332 2  23444444444444689999


Q ss_pred             EeC-CCC-------hH---HH-HhhcccCCEEE
Q 021628          219 FDA-VGQ-------CD---KA-LKAVKEGGRVV  239 (310)
Q Consensus       219 i~~-~g~-------~~---~~-~~~l~~~G~~v  239 (310)
                      +.- .+.       +.   .+ -+.|+|+|+++
T Consensus       107 vse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         107 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             EEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            853 331       12   22 24789999987

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.08  E-value=0.038  Score=41.57  Aligned_cols=106  Identities=26%  Similarity=0.296  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC----
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      -.|.++.|.| .|.+|...+++++. +|.+|++.++...+.... +.+...      .++.+.....|+|+-+.+.    
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~-fg~~v~~~d~~~~~~~~~-~~~~~~------~~l~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAA-FGAYVVAYDPYVSPARAA-QLGIEL------LSLDDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEEECTTSCHHHHH-HHTCEE------CCHHHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeecc-ccchhHHHHHHhhh-ccceEEeecCCCChhHHh-hcCcee------ccHHHHHhhCCEEEEcCCCCchh
Confidence            3578999999 99999999999999 499999998765443322 223211      1233344568899877651    


Q ss_pred             --h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          225 --C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 --~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                        +  ...++.|+++..++.++.-.            -=+-+++++.+.++++.-
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sRG~------------iVde~aL~~aL~~~~i~~  155 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAARGG------------LVDEAALADAITGGHVRA  155 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCTT------------SBCHHHHHHHHHTSSEEE
T ss_pred             hhhhhHHHHhhhCCCceEEEecchh------------hhhhHHHHHHHhcCcEeE
Confidence              1  68899999999999886311            112456788899999873

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.08  E-value=0.13  Score=39.37  Aligned_cols=97  Identities=24%  Similarity=0.293  Sum_probs=62.6

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc---cccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI---EDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~---~~~~~~~d  216 (310)
                      ....++||++||=+|+  +.|..+..+++.....+|++++.+++..+.+++    .+-...+..+..+.   ......+|
T Consensus        50 ~~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd  127 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVD  127 (209)
T ss_dssp             CCCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEE
T ss_pred             ccCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEE
Confidence            3568999999999983  346677788877533579999999998777643    33211222221111   11233577


Q ss_pred             EEEeCCCC-------hHHHHhhcccCCEEEEEe
Q 021628          217 VVFDAVGQ-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       217 vvi~~~g~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      +++.....       +.++.+.|+++|+++..-
T Consensus       128 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         128 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            77765432       366778999999998763

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.00  E-value=0.015  Score=45.18  Aligned_cols=69  Identities=17%  Similarity=0.170  Sum_probs=43.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCc--EEEEecChhhHHHHHHcCCCEEeeCCCC---cccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGAS--KVAATSSTAKLDLLRSLGADLAIDYTKE---NIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~--vi~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~dvvi~~~g  223 (310)
                      .+|||+|++|.+|...+..+... |.+  ++...+++++...+.. +.. ++..+..   ++....+++|.|+.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~-g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDITDADSINPAFQGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHT-TTTCEEEEEESCHHHHHHTTC-CTT-EEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHC-CCcEEEEEEcCCHHHHHhccC-CcE-EEEeeeccccccccccccceeeEEEEe
Confidence            58999999999999998877764 754  5566778776654422 222 2222211   12222457899988764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.98  E-value=0.069  Score=42.63  Aligned_cols=94  Identities=13%  Similarity=0.150  Sum_probs=65.6

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC-EEeeCCCCcccccCCCccEEEeCCC--
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD-LAIDYTKENIEDLPEKFDVVFDAVG--  223 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~dvvi~~~g--  223 (310)
                      ...++.+||=+| + +.|..+..+++...+.+++.++.+++.++.+++.... .....+..++......+|+|+....  
T Consensus        81 ~~~~~~~iLDiG-c-G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~~~~sfD~v~~~~~~~  158 (268)
T d1p91a_          81 LDDKATAVLDIG-C-GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC  158 (268)
T ss_dssp             SCTTCCEEEEET-C-TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC
T ss_pred             cCCCCCEEEEeC-C-CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccCCCCCEEEEeecCCHH
Confidence            356778898887 3 4467777777764357888999999998888664432 2222333333333457999997643  


Q ss_pred             ChHHHHhhcccCCEEEEEe
Q 021628          224 QCDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 ~~~~~~~~l~~~G~~v~~g  242 (310)
                      .+.+..+.|+|+|+++...
T Consensus       159 ~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         159 KAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             CHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHhCCCcEEEEEe
Confidence            4688999999999999774

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.87  E-value=0.11  Score=39.22  Aligned_cols=90  Identities=23%  Similarity=0.299  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCEE-eeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADLA-IDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~~-~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ++| +||=+| +| .|..+..+++.  |.+|+.++.+++.++.+++    .+.+.+ +...+.........+|+|+...-
T Consensus        30 ~~g-rvLDiG-cG-~G~~~~~la~~--g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~fD~I~~~~~  104 (198)
T d2i6ga1          30 APG-RTLDLG-CG-NGRNSLYLAAN--GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVV  104 (198)
T ss_dssp             CSC-EEEEET-CT-TSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCCCCCEEEEEEESC
T ss_pred             CCC-cEEEEC-CC-CCHHHHHHHHH--hhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccccccccEEEEeee
Confidence            444 899998 65 89999988874  8999999999998876643    344321 11111111112357899986432


Q ss_pred             --C---------hHHHHhhcccCCEEEEEeC
Q 021628          224 --Q---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       224 --~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                        .         +..+.++|+++|.++....
T Consensus       105 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         105 MMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             GGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence              1         2567778999999987643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.014  Score=38.61  Aligned_cols=68  Identities=16%  Similarity=0.282  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .|++|+|+| .|..|+++++++... |++|++.+.++.  ..+.+++ +....+...++   ....++|.++-+-|
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~-g~~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~d~vi~SPG   73 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLAR-GVTPRVMDTRMTPPGLDKLPE-AVERHTGSLND---EWLMAADLIVASPG   73 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEESSSSCTTGGGSCT-TSCEEESBCCH---HHHHHCSEEEECTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHC-CCEEEEeeCCcCchhHHHHhh-ccceeecccch---hhhccCCEEEECCC
Confidence            578899999 899999999999996 999999998443  2222222 22222222211   11236778877665

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=94.73  E-value=0.024  Score=45.47  Aligned_cols=42  Identities=19%  Similarity=0.147  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|+++||+|++|  ++|.+.+..+... |++|+++.++++..+.+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~-Ga~V~i~~r~~~~~~~~   47 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNESLEKRV   47 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESSTTTHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHH
Confidence            589999999776  7999988777774 99999999987544333

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.71  E-value=0.14  Score=36.77  Aligned_cols=79  Identities=25%  Similarity=0.333  Sum_probs=53.6

Q ss_pred             EEEEEcCCcchHHHHHH-HHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCCC--ChHHH
Q 021628          153 SILVLGGAGGVGTMVIQ-LAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKA  228 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~-la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~~~  228 (310)
                      +|.+.| +|.+|.+.+. +.+. ++.++++.++++++.+.+. +++.. +.+..    .. ....|+||=|+.  .....
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~----~~-v~~~Div~lavkP~~~~~v   73 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVE-TSATL----PE-LHSDDVLILAVKPQDMEAA   73 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCE-EESSC----CC-CCTTSEEEECSCHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccc-ccccc----cc-ccccceEEEecCHHHHHHh
Confidence            478889 8999997666 5665 3589999999999988875 46653 22211    11 245799998875  34666


Q ss_pred             HhhcccCCEEE
Q 021628          229 LKAVKEGGRVV  239 (310)
Q Consensus       229 ~~~l~~~G~~v  239 (310)
                      ++.+.+.+.++
T Consensus        74 ~~~l~~~~~~v   84 (152)
T d1yqga2          74 CKNIRTNGALV   84 (152)
T ss_dssp             HTTCCCTTCEE
T ss_pred             HHHHhhcccEE
Confidence            66666655544

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.69  E-value=0.035  Score=47.23  Aligned_cols=101  Identities=21%  Similarity=0.286  Sum_probs=67.0

Q ss_pred             HHHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHHc-----------CC----CEE-e
Q 021628          139 AYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRSL-----------GA----DLA-I  201 (310)
Q Consensus       139 a~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~~-----------g~----~~~-~  201 (310)
                      ....++..++++||+++=+|  .+.|..+.++|+.. ++ +++.++.++...+.+++.           +.    ... .
T Consensus       205 i~~Il~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~-g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~  281 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLG--SGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL  281 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEES--CTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred             HHHHHHHhCCCCCCEEEeCC--CCCcHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence            55566888999999998888  67899999999985 76 789999998877666431           11    111 1


Q ss_pred             eCCC---CcccccCCCccEEEeCCC----C----hHHHHhhcccCCEEEEEe
Q 021628          202 DYTK---ENIEDLPEKFDVVFDAVG----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       202 ~~~~---~~~~~~~~~~dvvi~~~g----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      ..+.   +........+|+++...-    .    +.+.++.|+|||+++..-
T Consensus       282 ~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         282 KKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eechhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1110   001112235788874321    1    368888999999999763

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.62  E-value=0.066  Score=39.71  Aligned_cols=92  Identities=20%  Similarity=0.169  Sum_probs=59.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-C-hhhHHHHHHcCCCEEeeCCCC--c-----------ccccCCCccE
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-S-TAKLDLLRSLGADLAIDYTKE--N-----------IEDLPEKFDV  217 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~-~~~~~~~~~~g~~~~~~~~~~--~-----------~~~~~~~~dv  217 (310)
                      +|.|.| .|-+|...+..+......+++.+-. + .+....+.+.+.+......+.  .           +.+...++|+
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            688999 9999998888776533456766643 3 334455566664433211110  0           0111247999


Q ss_pred             EEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          218 VFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       218 vi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      |+||+|.   .+.+-.++..|-+.+..+.+.
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            9999995   366778888999999887654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.60  E-value=0.057  Score=42.39  Aligned_cols=70  Identities=19%  Similarity=0.291  Sum_probs=45.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCc-------EEEEecChhhHHHHH----HcCCCEE-eeCCCCcccc----------
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGAS-------KVAATSSTAKLDLLR----SLGADLA-IDYTKENIED----------  210 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~-------vi~~~~~~~~~~~~~----~~g~~~~-~~~~~~~~~~----------  210 (310)
                      -|||+|+++++|.+.+..+... |++       ++...+++++++.+.    +.|.... +..+-.+..+          
T Consensus         3 VvlITGas~GIG~aia~~la~~-G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHh-CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3689999999999977665554 887       788889988876653    2343322 2211111111          


Q ss_pred             cCCCccEEEeCCC
Q 021628          211 LPEKFDVVFDAVG  223 (310)
Q Consensus       211 ~~~~~dvvi~~~g  223 (310)
                      .-++.|++++++|
T Consensus        82 ~~g~iDilvnnAg   94 (240)
T d2bd0a1          82 RYGHIDCLVNNAG   94 (240)
T ss_dssp             HTSCCSEEEECCC
T ss_pred             HcCCcceeecccc
Confidence            1347899999887

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.57  E-value=0.16  Score=39.46  Aligned_cols=127  Identities=20%  Similarity=0.209  Sum_probs=75.6

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC----CCEEeeCCCCc---ccccCCCc
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----ADLAIDYTKEN---IEDLPEKF  215 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g----~~~~~~~~~~~---~~~~~~~~  215 (310)
                      ++...++||++||=+|+  +.|..+..+++...+.+|++++.+++..+.+++.-    ....+..+...   .......+
T Consensus        67 l~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v  144 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKV  144 (230)
T ss_dssp             CCCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred             HHhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccccccee
Confidence            45678999999999993  45778888888632458999999999888775532    11122222211   12222345


Q ss_pred             cEEEeCCCC-------hHHHHhhcccCCEEEEEeCCC-CCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          216 DVVFDAVGQ-------CDKALKAVKEGGRVVSIIGSV-TPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       216 dvvi~~~g~-------~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      |+++.....       +.++.+.|+|+|+++..-... ....     ......+.+..+.+++..+...
T Consensus       145 ~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~k~~~~d~~-----~~~~~~~~e~~~~L~~aGF~iv  208 (230)
T d1g8sa_         145 DVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVT-----KDPKEIFKEQKEILEAGGFKIV  208 (230)
T ss_dssp             EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSS-----SCHHHHHHHHHHHHHHHTEEEE
T ss_pred             EEeeccccchHHHHHHHHHHHHhcccCceEEEEeeccccCCC-----CCHHHHHHHHHHHHHHcCCEEE
Confidence            666655432       367778999999988763211 0000     0112345666677766555543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.50  E-value=0.027  Score=44.69  Aligned_cols=44  Identities=23%  Similarity=0.199  Sum_probs=33.6

Q ss_pred             CCCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          149 SAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       149 ~~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      -.|+++||+|+++  ++|.+.+..+... |++|++..++++..+.++
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~-G~~V~i~~~~~~~~~~~~   48 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVE   48 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHT-TCEEEEEESSTTTHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence            3689999999888  6777766665553 999999999877665553

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.48  E-value=0.16  Score=36.57  Aligned_cols=90  Identities=22%  Similarity=0.305  Sum_probs=59.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEec--ChhhH-HHHHHcCCCEEeeCCCCcccc-----------------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAATS--STAKL-DLLRSLGADLAIDYTKENIED-----------------  210 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~--~~~~~-~~~~~~g~~~~~~~~~~~~~~-----------------  210 (310)
                      .+|.|+|++|.+|.-++.+.+... ..+++.+..  +-+.+ +.+++|.+.+++-.+++....                 
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            689999999999999999998732 357776654  33333 444778888775443322110                 


Q ss_pred             -----cCCCccEEEeCC-C--ChHHHHhhcccCCEEEEE
Q 021628          211 -----LPEKFDVVFDAV-G--QCDKALKAVKEGGRVVSI  241 (310)
Q Consensus       211 -----~~~~~dvvi~~~-g--~~~~~~~~l~~~G~~v~~  241 (310)
                           ....+|+|+.+. |  .+...+..+..+-++...
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                 012579999984 5  357778888777665433

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.44  E-value=0.21  Score=36.26  Aligned_cols=104  Identities=18%  Similarity=0.156  Sum_probs=66.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCCh---H--
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQC---D--  226 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~~---~--  226 (310)
                      .+|.+.| .|.+|...+.-+... |.+|++.++++++.+.+.+.+.....     +..+.....|+++-|....   +  
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~-g~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~e~~~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAAGASAAR-----SARDAVQGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHTTCEECS-----SHHHHHTSCSEEEECCSCHHHHHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHC-CCeEEEEECchhhhhhhhhhhccccc-----hhhhhccccCeeeecccchhhHHHH
Confidence            3688999 999998755544443 89999999999999988887753221     2233345678888887632   1  


Q ss_pred             -----HHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          227 -----KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       227 -----~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                           .....+.++-.++.++.            ...+...++-+.+++..+.
T Consensus        75 ~~~~~~~~~~l~~g~iiid~st------------~~p~~~~~~~~~~~~~gi~  115 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECST------------IAPTSARKIHAAARERGLA  115 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECSC------------CCHHHHHHHHHHHHHTTCE
T ss_pred             HhccccccccCCCCCEEEECCC------------CCHHHHHHHHHHHHHCCCc
Confidence                 23445666666666642            3445555555555554443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.37  E-value=0.04  Score=40.01  Aligned_cols=83  Identities=19%  Similarity=0.283  Sum_probs=58.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCC--ChHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKAL  229 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~~~~  229 (310)
                      +|.+.| .|.+|.+.+.-... .+.++++..++.++.+.+ +++|.....     +..+..+..|+||-|+.  .....+
T Consensus         2 kIg~IG-~G~mG~al~~~l~~-~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~~~~~~~~~dvIilavkp~~~~~vl   74 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQ-TPHELIISGSSLERSKEIAEQLALPYAM-----SHQDLIDQVDLVILGIKPQLFETVL   74 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-SSCEEEEECSSHHHHHHHHHHHTCCBCS-----SHHHHHHTCSEEEECSCGGGHHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHh-CCCeEEEEcChHHhHHhhccccceeeec-----hhhhhhhccceeeeecchHhHHHHh
Confidence            477889 99999987665555 388999999998887776 567754321     22333457899998874  347778


Q ss_pred             hhcccCCEEEEEe
Q 021628          230 KAVKEGGRVVSII  242 (310)
Q Consensus       230 ~~l~~~G~~v~~g  242 (310)
                      +.+.++..++++.
T Consensus        75 ~~l~~~~~iis~~   87 (152)
T d2ahra2          75 KPLHFKQPIISMA   87 (152)
T ss_dssp             TTSCCCSCEEECC
T ss_pred             hhcccceeEeccc
Confidence            8888877777663

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.28  E-value=0.024  Score=45.09  Aligned_cols=38  Identities=29%  Similarity=0.518  Sum_probs=30.1

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCc-EEEEecC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGAS-KVAATSS  185 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~-vi~~~~~  185 (310)
                      ..+|+.++||+|+++++|++.+..+... |++ ++++.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~-Ga~~vvl~~R~   43 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARR-GAPHLLLVSRS   43 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH-TCSEEEEEESS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence            4689999999999999999977766654 875 6666665

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.23  E-value=0.025  Score=44.39  Aligned_cols=38  Identities=18%  Similarity=0.305  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +|++|||+|+++++|.+.++.+... |++|+++++++.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~-G~~V~~~~~~~~~   38 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRAR-NWWVASIDVVENE   38 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSCCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCccc
Confidence            4889999999999999988888774 9999998876543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.026  Score=44.14  Aligned_cols=73  Identities=19%  Similarity=0.320  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcCCCEE-eeCCC-CcccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLGADLA-IDYTK-ENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~dvvi~~~g  223 (310)
                      .+.+|||+|++|.+|...++.+... |.  +|++++|++.+...-..-..... .+..+ +++.....++|.++.|+|
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~-g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccc
Confidence            3468999999999999988877664 64  78899986554322111112211 22221 233334568999999987

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.13  E-value=0.15  Score=41.65  Aligned_cols=91  Identities=19%  Similarity=0.203  Sum_probs=55.7

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH---HHHHcCC-C--EEeeCCCCcccccCCCccEEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD---LLRSLGA-D--LAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~---~~~~~g~-~--~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      ..+.+|++||-+| +|. |.+++.+|+. +..+|++++.++.-..   .+++.+. +  .++..+..+.......+|+|+
T Consensus        29 ~~~~~~~~VLDiG-cG~-G~ls~~aa~~-Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~~~~~D~iv  105 (316)
T d1oria_          29 RHLFKDKVVLDVG-SGT-GILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIII  105 (316)
T ss_dssp             HHHHTTCEEEEET-CTT-SHHHHHHHHT-TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred             cccCCcCEEEEEe-cCC-cHHHHHHHHh-CCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccccceeEEEe
Confidence            4566899999998 664 8888888885 2347888887754221   2223332 2  233444444443445799987


Q ss_pred             eC-CCC-------h----HHHHhhcccCCEEE
Q 021628          220 DA-VGQ-------C----DKALKAVKEGGRVV  239 (310)
Q Consensus       220 ~~-~g~-------~----~~~~~~l~~~G~~v  239 (310)
                      .. .+.       +    ...-+.|+|+|+++
T Consensus       106 s~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         106 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            53 331       2    23347999999987

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.07  E-value=0.027  Score=43.06  Aligned_cols=103  Identities=25%  Similarity=0.276  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .|.+|.|+| .|.+|...++.++.. |.+|++.++...+...   ...    .  ..++.+.....|++.-+.+.     
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~~---~~~----~--~~~l~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGF-GAKVIAYDPYPMKGDH---PDF----D--YVSLEDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSSCC---TTC----E--ECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeee-ccccccccccccccc-ceeeeccCCccchhhh---cch----h--HHHHHHHHHhcccceeeeccccccc
Confidence            468999999 999999999999995 9999999875432110   000    0  01223333467888777651     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                       +  ...++.|+++..++.++.-.            --+-+++++.+.++++.-
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG~------------vvde~aL~~aL~~g~i~g  154 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARPN------------LIDTQAMLSNLKSGKLAG  154 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTT------------SBCHHHHHHHHHTTSEEE
T ss_pred             ccccHHHhhccCCceEEEecccHh------------hhhhHHHHHHHhcCCcce
Confidence             1  68889999999999886311            113456778899999874

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.06  E-value=0.18  Score=37.53  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=50.1

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh-----------------------hHHHHHHcCCCEEeeC
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA-----------------------KLDLLRSLGADLAIDY  203 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~-----------------------~~~~~~~~g~~~~~~~  203 (310)
                      ....+++|+|.| +|+.|+.|+..+... |.+|++...+++                       ..+.++++|.+..++.
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~-G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~  116 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNH  116 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESC
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHhh-ccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCC
Confidence            345578999999 999999999999885 999999987542                       1122234565544433


Q ss_pred             CCCcccccCCCccEEEeCCCC
Q 021628          204 TKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       204 ~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      .-.  .+....+|.||-+.|.
T Consensus       117 ~Vt--~~~~~~~d~vilAtG~  135 (179)
T d1ps9a3         117 TVT--ADQLQAFDETILASGI  135 (179)
T ss_dssp             CCC--SSSSCCSSEEEECCCE
T ss_pred             EEc--ccccccceeEEEeecC
Confidence            211  2224578889888884

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.95  E-value=0.13  Score=41.31  Aligned_cols=95  Identities=22%  Similarity=0.300  Sum_probs=64.6

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHHH----cCCCEE-eeCCCCcccccCCCccEEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLRS----LGADLA-IDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~~----~g~~~~-~~~~~~~~~~~~~~~dvvi  219 (310)
                      .++.++.+||=+| +| .|..+..+++... +.+++.++.+++.++.+++    .+.+.. ...+..... ..+.+|+|+
T Consensus        23 ~~~~~~~~ILDiG-cG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~-~~~~fD~v~   99 (281)
T d2gh1a1          23 WKITKPVHIVDYG-CG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAI   99 (281)
T ss_dssp             SCCCSCCEEEEET-CT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEE
T ss_pred             hccCCcCEEEEec-Cc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc-ccCCceEEE
Confidence            4567788999998 65 6888888888642 4689999999998887754    233322 222222221 235799998


Q ss_pred             eCCC-----C----hHHHHhhcccCCEEEEEeC
Q 021628          220 DAVG-----Q----CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       220 ~~~g-----~----~~~~~~~l~~~G~~v~~g~  243 (310)
                      ....     +    ++.+.+.|+|||+++....
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~~  132 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP  132 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            6542     2    3778899999999987754

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.95  E-value=0.73  Score=33.28  Aligned_cols=110  Identities=13%  Similarity=0.069  Sum_probs=66.8

Q ss_pred             EEEEEcCCcchHHH-HHHHHHhhcCCcEEEEecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHH
Q 021628          153 SILVLGGAGGVGTM-VIQLAKHVFGASKVAATSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDK  227 (310)
Q Consensus       153 ~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~  227 (310)
                      +|.|.| +|.+|.- .+...+...+..++++++++++.+.+ ++++...+++.-++.+   ...+|+|+-|++.   .+.
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll---~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVL---QYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGG---GGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhc---ccccceecccccccccccc
Confidence            578999 8888854 55555554456777777888887776 5577544433222222   2368999988873   356


Q ss_pred             HHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          228 ALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      +..++..| +-+.+.-+.         ....+...++.++..+......
T Consensus        79 ~~~al~~g-k~V~~EKP~---------~~~~~e~~~l~~~a~~~~~~~~  117 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDKPL---------AASAQECENLYELAEKHHQPLY  117 (167)
T ss_dssp             HHHHHHTT-CCEEEESCS---------CSSHHHHHHHHHHHHHTTCCEE
T ss_pred             cccccccc-cccccCCCC---------cCCHHHHHHHHHHHHHcCCEEE
Confidence            66777654 445554322         1234566666777666655543

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=93.89  E-value=0.066  Score=42.12  Aligned_cols=70  Identities=17%  Similarity=0.263  Sum_probs=44.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH----HHcCCCEE-eeCCCCcccc----------cCCCcc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL----RSLGADLA-IDYTKENIED----------LPEKFD  216 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~----~~~g~~~~-~~~~~~~~~~----------~~~~~d  216 (310)
                      .|||+|+++++|.+.+..+... |++|++.+. ++++++.+    ++.+.+.. +..+-.+..+          .-++.|
T Consensus         3 V~lITGas~GIG~a~a~~la~~-Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKA-GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999977766664 999988754 66665544    34554322 2211111111          124789


Q ss_pred             EEEeCCC
Q 021628          217 VVFDAVG  223 (310)
Q Consensus       217 vvi~~~g  223 (310)
                      ++++++|
T Consensus        82 iLVnnAg   88 (244)
T d1edoa_          82 VVVNNAG   88 (244)
T ss_dssp             EEEECCC
T ss_pred             ccccccc
Confidence            9999887

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.88  E-value=0.045  Score=40.94  Aligned_cols=40  Identities=20%  Similarity=0.336  Sum_probs=33.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR  193 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~  193 (310)
                      +|.|+|++|.+|.+.++.+... |.+|++..|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~-G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence            5788876899999988877764 999999999999877663

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.71  E-value=0.053  Score=41.10  Aligned_cols=107  Identities=21%  Similarity=0.244  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC-C---
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG-Q---  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g-~---  224 (310)
                      -.|.+|.|+| .|.+|...++.++.. |.+|+..++...... ....+....     .++.+.....|+|.-+.+ +   
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~-~~~~~~~~~-----~~l~~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKAF-GFNVLFYDPYLSDGV-ERALGLQRV-----STLQDLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECTTSCTTH-HHHHTCEEC-----SSHHHHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEec-cccccccceeeeecc-ccceeeccCcccccc-hhhhccccc-----cchhhccccCCEEEEeecccccc
Confidence            3578999999 999999999999995 999999987544322 222232111     122333446788877665 1   


Q ss_pred             --h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          225 --C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 --~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                        +  ...++.|+++..++.++.-.            --+-+++++.+.++++.-
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG~------------ivde~aL~~aL~~~~i~~  161 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARGG------------LVDEKALAQALKEGRIRG  161 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCTT------------SBCHHHHHHHHHHTSEEE
T ss_pred             hhhhhHHHHhccCCCCeEEecCCce------------EEcHHHHHHHHHcCCceE
Confidence              1  67889999999998886311            013456778888998863

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.70  E-value=0.1  Score=41.09  Aligned_cols=92  Identities=16%  Similarity=0.206  Sum_probs=59.2

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC-EE--eeCCCCcc-cccCCCccEE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD-LA--IDYTKENI-EDLPEKFDVV  218 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~-~~~~~~~dvv  218 (310)
                      -.+++++||=+| +|. |..+..+++. +..+++.++.+++.++.+++    .+.. .+  ...+.... ....+.+|+|
T Consensus        21 ~~~~~~~VLDlG-CG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V   97 (252)
T d1ri5a_          21 YTKRGDSVLDLG-CGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI   97 (252)
T ss_dssp             HCCTTCEEEEET-CTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred             hCCCcCEEEEec-ccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEE
Confidence            357899999998 665 6667788876 34579999999998888753    3322 21  11111111 1123469999


Q ss_pred             EeCCC-C------------hHHHHhhcccCCEEEEE
Q 021628          219 FDAVG-Q------------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       219 i~~~g-~------------~~~~~~~l~~~G~~v~~  241 (310)
                      +.... +            +..+.+.|+|||+++..
T Consensus        98 ~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          98 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            86533 1            14456789999999864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.68  E-value=0.029  Score=44.13  Aligned_cols=40  Identities=23%  Similarity=0.360  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLD  190 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~  190 (310)
                      .|+++||+|+++++|.+.++.+... |++|+++.+++++.+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~-Ga~V~~~~r~~~~~~   45 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAAD-GHKVAVTHRGSGAPK   45 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSSCCCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcchhc
Confidence            6899999999999999988877664 999999999876654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.60  E-value=0.038  Score=45.20  Aligned_cols=69  Identities=22%  Similarity=0.213  Sum_probs=43.6

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCC---CEEeeCCCCcccccCCCccEEEeCCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGA---DLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      ++|||+|++|-+|...+..+... |.+|+++++ +..+.+.+.....   -.+.+.+.  ......++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~-g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMD-GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV--VEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT--TSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH--HHHHHcCCCEEEECcc
Confidence            57999999999999988877774 999999875 3333333322211   11222221  2222347999999864

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.59  E-value=0.11  Score=41.10  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=29.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +.||+|+++++|.+.+..+... |++|+++.++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~-G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQ-GFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCchH
Confidence            5699999999999988877664 9999999987554

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.52  E-value=0.15  Score=37.84  Aligned_cols=90  Identities=17%  Similarity=0.144  Sum_probs=53.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-Chh-hHHHHHHcCCCEEeeCCC-Ccc-----------cccCCCccEE
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STA-KLDLLRSLGADLAIDYTK-ENI-----------EDLPEKFDVV  218 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~-~~~~~~~~g~~~~~~~~~-~~~-----------~~~~~~~dvv  218 (310)
                      +|.|.| .|-+|+..++.+......+++++.. ++. ....+...+.......+. ..+           .+...++|+|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            588999 9999999999888743567777654 333 333333333222111111 000           1111368999


Q ss_pred             EeCCCCh---HHHHhhcccCCEEEEEeC
Q 021628          219 FDAVGQC---DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       219 i~~~g~~---~~~~~~l~~~G~~v~~g~  243 (310)
                      +||+|..   +.+-.++..+-+.+..++
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            9999953   556667777767776544

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.088  Score=40.88  Aligned_cols=91  Identities=16%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC----CE-EeeCCCCcc--cccCCCccEE-E
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DL-AIDYTKENI--EDLPEKFDVV-F  219 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~----~~-~~~~~~~~~--~~~~~~~dvv-i  219 (310)
                      ..+|.+||-+|  .+.|..+..+++. .+.++++++.+++.++.+++...    .. .+.......  ......+|.+ +
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~-~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHc-CCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceee
Confidence            36789999998  5568888889887 36789999999999988865431    11 111111111  1112468877 4


Q ss_pred             eCCC------C-------hHHHHhhcccCCEEEEE
Q 021628          220 DAVG------Q-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       220 ~~~g------~-------~~~~~~~l~~~G~~v~~  241 (310)
                      |+..      +       ++++.+.|+|||+++..
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            6542      1       14677899999999865

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.46  E-value=0.18  Score=34.50  Aligned_cols=43  Identities=14%  Similarity=0.256  Sum_probs=35.1

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ++.....++.+|+|.| .|.+|+=.++.++.. |.++.++.+.+.
T Consensus        14 ~~~l~~~~~~~vvVvG-gG~ig~E~A~~l~~~-g~~vt~i~~~~~   56 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVG-GSKTAVEYGCFFNAT-GRRTVMLVRTEP   56 (121)
T ss_dssp             HHHCCSCCCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred             HHHHhhCCCCEEEEEC-CCHHHHHHHHHHHhc-chhheEeeccch
Confidence            3455667899999999 999999888888875 999999987543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.46  E-value=0.042  Score=42.91  Aligned_cols=37  Identities=30%  Similarity=0.311  Sum_probs=31.1

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      +++||+|+++++|.+.++.+... |++|+++++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKAR-GYRVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECCcccc
Confidence            57899999999999988776664 99999999876643

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.45  E-value=0.46  Score=35.44  Aligned_cols=93  Identities=18%  Similarity=0.241  Sum_probs=61.5

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC---C-EEeeCCCCcccccCCCc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA---D-LAIDYTKENIEDLPEKF  215 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~---~-~~~~~~~~~~~~~~~~~  215 (310)
                      +.....++++||=.|  .+.|..++.+++.  +.++++++.++...+.+++    .+.   . .+...+... ....+.+
T Consensus        46 ~~l~~~~~~~VLDiG--cG~G~~~~~la~~--~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~-~~~~~~f  120 (194)
T d1dusa_          46 ENVVVDKDDDILDLG--CGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKY  120 (194)
T ss_dssp             HHCCCCTTCEEEEET--CTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCE
T ss_pred             HhCCcCCCCeEEEEe--ecCChhHHHHHhh--ccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh-hhccCCc
Confidence            556778999999998  4457777777764  6789999999888777753    232   1 222222211 1123579


Q ss_pred             cEEEeCCC---C-------hHHHHhhcccCCEEEEE
Q 021628          216 DVVFDAVG---Q-------CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       216 dvvi~~~g---~-------~~~~~~~l~~~G~~v~~  241 (310)
                      |+|+....   .       ++.+.+.|+|+|+++..
T Consensus       121 D~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         121 NKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             EEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            99996432   1       26677899999998654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.37  E-value=0.32  Score=31.96  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=48.7

Q ss_pred             cCCCCEEEEEcCCcchHHHH-HHHHHhhcCCcEEEEecC-hhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          148 FSAGKSILVLGGAGGVGTMV-IQLAKHVFGASKVAATSS-TAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a-~~la~~~~g~~vi~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      .+..+++.++| .|++|+.+ +++++.. |.+|...+.. ....+.+.+.|.......+.+.    ..+.|+|+=..+
T Consensus         5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~-G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~----i~~~d~vV~S~A   76 (96)
T d1p3da1           5 MRRVQQIHFIG-IGGAGMSGIAEILLNE-GYQISGSDIADGVVTQRLAQAGAKIYIGHAEEH----IEGASVVVVSSA   76 (96)
T ss_dssp             CTTCCEEEEET-TTSTTHHHHHHHHHHH-TCEEEEEESCCSHHHHHHHHTTCEEEESCCGGG----GTTCSEEEECTT
T ss_pred             chhCCEEEEEE-ECHHHHHHHHHHHHhC-CCEEEEEeCCCChhhhHHHHCCCeEEECCcccc----CCCCCEEEECCC
Confidence            45668899999 89999887 7888886 9999999984 3445666778875433333221    246787775544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.34  E-value=0.042  Score=43.71  Aligned_cols=43  Identities=21%  Similarity=0.294  Sum_probs=34.7

Q ss_pred             CCCEEEEEcCCcchHHHHHH-HHHh-hcCCcEEEEecChhhHHHH
Q 021628          150 AGKSILVLGGAGGVGTMVIQ-LAKH-VFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~-la~~-~~g~~vi~~~~~~~~~~~~  192 (310)
                      .|+.++|+|+++++|.+.++ +|+. ..|++|+++.+++++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHH
Confidence            46788999999999998655 5652 1389999999999988766

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.02  Score=42.08  Aligned_cols=88  Identities=14%  Similarity=0.103  Sum_probs=51.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE--EeeCCCCcccccCCCccEEEeCCCC--h---
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL--AIDYTKENIEDLPEKFDVVFDAVGQ--C---  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~dvvi~~~g~--~---  225 (310)
                      +|+|+| +|.+|.+....+... |.+|..+++++++.+.....+.+.  .......+.......+|++|-++..  .   
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~   79 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQ-GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDA   79 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHH
T ss_pred             EEEEEC-cCHHHHHHHHHHHHC-CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHH
Confidence            589999 799998765555553 899999999876554332222110  0000000011112478999999863  3   


Q ss_pred             -HHHHhhcccCCEEEEEe
Q 021628          226 -DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 -~~~~~~l~~~G~~v~~g  242 (310)
                       +....++.++..++.+.
T Consensus        80 ~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          80 VKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHHTTSCTTSCEEEEC
T ss_pred             HHhhccccCcccEEeecc
Confidence             34445556667677663

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.23  E-value=0.24  Score=40.54  Aligned_cols=90  Identities=19%  Similarity=0.241  Sum_probs=53.7

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCC---EEeeCCCCcccccCCCccEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD---LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~~~~dvv  218 (310)
                      ....+|++||-+| +| .|.++..+|+. +..+|++++.++ ..+.+    ++.+..   .++..+..+.......+|+|
T Consensus        34 ~~~~~~~~VLDlG-cG-tG~ls~~aa~~-Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i  109 (328)
T d1g6q1_          34 KDLFKDKIVLDVG-CG-TGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDII  109 (328)
T ss_dssp             HHHHTTCEEEEET-CT-TSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEE
T ss_pred             cccCCcCEEEEeC-CC-CCHHHHHHHHh-CCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccCcccceeEE
Confidence            4556899999998 56 57888777775 234777887765 33233    334421   23333333333334579998


Q ss_pred             EeC-CCC-------h----HHHHhhcccCCEEE
Q 021628          219 FDA-VGQ-------C----DKALKAVKEGGRVV  239 (310)
Q Consensus       219 i~~-~g~-------~----~~~~~~l~~~G~~v  239 (310)
                      +.. .+.       .    ...-+.|+|+|+++
T Consensus       110 ~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         110 ISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            763 221       1    22236899999886

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.067  Score=36.50  Aligned_cols=38  Identities=18%  Similarity=0.400  Sum_probs=32.3

Q ss_pred             cCCC-CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          148 FSAG-KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       148 ~~~g-~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      +.|+ .+|.|+| .|.+|++.++-|+.+ |.++++.+.++.
T Consensus         7 ~~~~~~kigIlG-gGQL~rMla~aA~~l-G~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLG-SGELGKEVAIECQRL-GVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEES-CSHHHHHHHHHHHTT-TCEEEEEESSTT
T ss_pred             CCCCCCEEEEEe-CCHHHHHHHHHHHHC-CCEEEEEcCCCC
Confidence            3455 4699999 999999999999997 999999987655

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.15  E-value=0.3  Score=31.58  Aligned_cols=65  Identities=20%  Similarity=0.270  Sum_probs=45.2

Q ss_pred             EEEEEcCCcchHHHH-HHHHHhhcCCcEEEEecCh-hhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMV-IQLAKHVFGASKVAATSST-AKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a-~~la~~~~g~~vi~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|-++| -|++|+.+ +++++.+ |..|...|..+ +..+.+++.|+......+.+.    ..++|+|+-+..
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~-G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~----i~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSN-GNDVYGSNIEETERTAYLRKLGIPIFVPHSADN----WYDPDLVIKTPA   69 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHTTCCEESSCCTTS----CCCCSEEEECTT
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhC-CCeEEEEeCCCChhHHHHHHCCCeEEeeecccc----cCCCCEEEEecC
Confidence            566778 89999876 5678885 99999999854 456778999976544322222    246788876544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.13  E-value=0.53  Score=34.48  Aligned_cols=89  Identities=16%  Similarity=0.072  Sum_probs=56.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCE---EeeCCCCcccccCCCccEEEeCCCC----
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADL---AIDYTKENIEDLPEKFDVVFDAVGQ----  224 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~dvvi~~~g~----  224 (310)
                      .+|-++| .|.+|...+.-+... |.+|++.++++++.+.+.+.+...   .......+..+.....|.++.+...    
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV   80 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHH
Confidence            3588999 899998765554443 899999999999998886654321   1111111222334466788777652    


Q ss_pred             ---hHHHHhhcccCCEEEEEe
Q 021628          225 ---CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       225 ---~~~~~~~l~~~G~~v~~g  242 (310)
                         .+.....+.++..++.++
T Consensus        81 ~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHhccccCcEEEecC
Confidence               145556677777777665

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.12  E-value=0.18  Score=37.15  Aligned_cols=91  Identities=16%  Similarity=0.205  Sum_probs=56.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-C-hhhHHHHHHcCCCEEeeCCCCc--cc-----------ccCCCccE
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-S-TAKLDLLRSLGADLAIDYTKEN--IE-----------DLPEKFDV  217 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~-~~~~~~~~~~g~~~~~~~~~~~--~~-----------~~~~~~dv  217 (310)
                      +|.|.| -|-+|...+..+......+++.+.. + ......+..++.+......+..  +.           +...++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            688999 9999999998876643456666643 3 2334455555544332211110  00           01237999


Q ss_pred             EEeCCCCh---HHHHhhcccCCEEEEEeCC
Q 021628          218 VFDAVGQC---DKALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       218 vi~~~g~~---~~~~~~l~~~G~~v~~g~~  244 (310)
                      |+||+|..   +.+-.++..+-+.+..+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            99999953   5566778888887776543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.94  E-value=0.34  Score=35.49  Aligned_cols=95  Identities=24%  Similarity=0.232  Sum_probs=64.3

Q ss_pred             ccccchHHHHHHHHHhccc-CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcc
Q 021628          130 ASLPLATETAYEGLERSAF-SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENI  208 (310)
Q Consensus       130 a~~~~~~~ta~~al~~~~~-~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~  208 (310)
                      +.+||.....+..++..++ -.|.+|+|.|.+..+|.-...++... |+.|+++......+..                 
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~-gatVt~~~~~t~~l~~-----------------   78 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-NATVTTCHSKTAHLDE-----------------   78 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTTCSSHHH-----------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhc-cCceEEEecccccHHH-----------------
Confidence            4456665555555554443 47999999999999999988888885 9999888764443322                 


Q ss_pred             cccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          209 EDLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       209 ~~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                        ..+.+|+++.++|..+ ---.+++++..++.+|..
T Consensus        79 --~~~~aDivi~a~G~~~~i~~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          79 --EVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             --HHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCB
T ss_pred             --HHhhccchhhccccccccccccccCCCeEeccCcc
Confidence              1235678888887532 123567778888887743

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.35  Score=39.54  Aligned_cols=100  Identities=18%  Similarity=0.221  Sum_probs=63.9

Q ss_pred             HHHHHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHHHH-----------cCC--C--EEeeC
Q 021628          140 YEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLLRS-----------LGA--D--LAIDY  203 (310)
Q Consensus       140 ~~al~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~~~-----------~g~--~--~~~~~  203 (310)
                      ...++..+++++++|+=+|  .+.|..+.++|+.. ++ +++.++.+++..+.+++           +|.  .  .+...
T Consensus       141 ~~~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~-~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~g  217 (328)
T d1nw3a_         141 AQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG  217 (328)
T ss_dssp             HHHHHHSCCCTTCEEEEET--CTTSHHHHHHHHHC-CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEC
T ss_pred             HHHHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEEC
Confidence            3445788999999999998  56788899999874 76 68889989887666532           121  1  12222


Q ss_pred             CCCc--ccccCCCccEEEeCCC----C----hHHHHhhcccCCEEEEEe
Q 021628          204 TKEN--IEDLPEKFDVVFDAVG----Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       204 ~~~~--~~~~~~~~dvvi~~~g----~----~~~~~~~l~~~G~~v~~g  242 (310)
                      +-.+  +.+....+|+|+...-    .    +.+.++.|+|||+++..-
T Consensus       218 d~~~~~~~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         218 DFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CTTSHHHHHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            1111  1111124678774321    1    367788899999998763

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.65  E-value=0.46  Score=34.54  Aligned_cols=94  Identities=22%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             cccchHHHHHHHHHhcc-cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc
Q 021628          131 SLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE  209 (310)
Q Consensus       131 ~~~~~~~ta~~al~~~~-~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  209 (310)
                      .+||.....+..++..+ .-.|++|+|.|.+..+|.-...++... |+.|+++......+..                  
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~-gatVt~~h~~t~~l~~------------------   76 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-GCTTTVTHRFTKNLRH------------------   76 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-TCEEEEECSSCSCHHH------------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHh-hccccccccccchhHH------------------
Confidence            44655544555555433 346999999998999999988888885 9998877654333321                  


Q ss_pred             ccCCCccEEEeCCCChH-HHHhhcccCCEEEEEeCC
Q 021628          210 DLPEKFDVVFDAVGQCD-KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       210 ~~~~~~dvvi~~~g~~~-~~~~~l~~~G~~v~~g~~  244 (310)
                       ..+.+|+++.++|..+ ---++++++..++.+|..
T Consensus        77 -~~~~ADivI~a~G~p~~i~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          77 -HVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -HHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCE
T ss_pred             -HHhhhhHhhhhccCcccccccccCCCcEEEecCce
Confidence             1235678888888431 123467788888888753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.64  E-value=0.056  Score=34.25  Aligned_cols=34  Identities=26%  Similarity=0.403  Sum_probs=29.9

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ++|.|+| +|.+|++.++-++.+ |.++++.+.+++
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~L-G~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPL-GIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGG-TEEEEEECTTSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHc-CCEEEEEcCCCC
Confidence            4789999 999999999999997 999999987543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.64  E-value=0.2  Score=38.81  Aligned_cols=67  Identities=19%  Similarity=0.177  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHH-HcCCCEEeeCCCCcccccCCCccEEEeCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLR-SLGADLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      -.|.+|+|.| .|.+|..+++++... |+++++++.+..+.+.+. ..|...+ +.+    ......+|+++=|+
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~-Gakvv~~d~~~~~~~~~~~~~g~~~~-~~~----~~~~~~cDIl~PcA  104 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTE-GAKLVVTDVNKAAVSAAVAEEGADAV-APN----AIYGVTCDIFAPCA  104 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHCCEEC-CGG----GTTTCCCSEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEeecccHHHHHHHHHhcCCccc-CCc----ccccccccEecccc
Confidence            4688999999 999999999999996 999999999988877664 4554322 111    11123566666554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.46  E-value=0.11  Score=42.19  Aligned_cols=70  Identities=24%  Similarity=0.319  Sum_probs=42.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--Chhh---HHHHHHcCCCEEeeCCCCc---ccccCC--CccEEEeCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAK---LDLLRSLGADLAIDYTKEN---IEDLPE--KFDVVFDAV  222 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~---~~~~~~~g~~~~~~~~~~~---~~~~~~--~~dvvi~~~  222 (310)
                      +|||+|++|-+|...+..+... |.+|+++++  ...+   +..+...+.-.++..+-.+   +.....  .+|.||.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~-g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            6999999999999988877774 999998864  2222   2333333322333322222   111112  469999987


Q ss_pred             C
Q 021628          223 G  223 (310)
Q Consensus       223 g  223 (310)
                      .
T Consensus        81 a   81 (338)
T d1orra_          81 G   81 (338)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.44  E-value=0.31  Score=37.32  Aligned_cols=94  Identities=12%  Similarity=0.169  Sum_probs=60.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhh--cCCcEEEEecChhhHHHHHH----cCCCEEeeCCCCcc-cccCCCccEEE
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHV--FGASKVAATSSTAKLDLLRS----LGADLAIDYTKENI-EDLPEKFDVVF  219 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~--~g~~vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~~~~~~dvvi  219 (310)
                      ..+++.+||=+| + +.|..+..+++..  .+++++.++.+++-++.+++    .+....+.....+. ......+|+++
T Consensus        36 ~~~~~~~vLDlG-C-GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~  113 (225)
T d1im8a_          36 FVTADSNVYDLG-C-SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVI  113 (225)
T ss_dssp             HCCTTCEEEEES-C-TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEE
T ss_pred             hcCCCCEEEEec-c-chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeE
Confidence            468999999998 4 3477777777642  37899999999998888854    23221111111111 11224567776


Q ss_pred             eCCC----C-------hHHHHhhcccCCEEEEEe
Q 021628          220 DAVG----Q-------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~g----~-------~~~~~~~l~~~G~~v~~g  242 (310)
                      .+..    +       ++++.+.|+|+|.++...
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            5432    1       367888999999999764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=92.41  E-value=0.85  Score=33.21  Aligned_cols=91  Identities=20%  Similarity=0.272  Sum_probs=57.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--ChhhHHHHHHc----CC-CEEeeC---------------CCCc---
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSL----GA-DLAIDY---------------TKEN---  207 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~~~~~~~~----g~-~~~~~~---------------~~~~---  207 (310)
                      +|.|.| -|-+|++..+.+... +.+++++-.  +.+.+..+-++    |. ...+..               ...+   
T Consensus         2 kigING-fGRIGR~~~R~l~~~-~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcC-CCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            578899 999999999988774 888887754  44444444332    20 000000               0111   


Q ss_pred             ccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          208 IEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       208 ~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ..+...++|+|+||+|.   .+.+..++..+.+-|.+..+.
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence            11122489999999994   467778888887777776554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=92.33  E-value=0.053  Score=42.38  Aligned_cols=37  Identities=22%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      +.+|||+|+++++|.+.++.+... |++|+++++++++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~-G~~V~~~~~~~~~   38 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKN-GYTVLNIDLSAND   38 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-TEEEEEEESSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCchh
Confidence            357999999999999988877774 9999999987654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.21  E-value=0.25  Score=37.83  Aligned_cols=93  Identities=12%  Similarity=0.105  Sum_probs=62.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC----CCE--EeeCCCCcccccCCCccEEEe
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG----ADL--AIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g----~~~--~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ...++.+||=+|  .+.|..+..+++.. +.+|+.++.+++-++.+++.-    ...  ....+-.++......+|+|+.
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~-~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~~  133 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWI  133 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhc-CCEEEEeecCHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            456778899998  55688888887763 678999999999888886532    211  223332333333457899986


Q ss_pred             CCC--C---------hHHHHhhcccCCEEEEEe
Q 021628          221 AVG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       221 ~~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      ...  +         +..+.+.|+|+|.++...
T Consensus       134 ~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         134 QWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            532  1         256678999999998774

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.10  E-value=0.29  Score=34.42  Aligned_cols=73  Identities=21%  Similarity=0.208  Sum_probs=46.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC--ChHHHHh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALK  230 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~~~~~  230 (310)
                      +|.|.|+.|-+|...+.......+.+++......+......                  ..++|++||.+.  .....++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~------------------~~~~DvvIDFS~p~~~~~~~~   62 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT------------------DGNTEVVIDFTHPDVVMGNLE   62 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH------------------TTTCSEEEECCCTTTHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc------------------cccCCEEEEcccHHHHHHHHH
Confidence            58999999999999888766544667766554332222221                  235778888764  3455555


Q ss_pred             hcccCCEEEEEeC
Q 021628          231 AVKEGGRVVSIIG  243 (310)
Q Consensus       231 ~l~~~G~~v~~g~  243 (310)
                      .+...|.-+.+|.
T Consensus        63 ~~~~~~~~~ViGT   75 (135)
T d1yl7a1          63 FLIDNGIHAVVGT   75 (135)
T ss_dssp             HHHHTTCEEEECC
T ss_pred             HHHhcCCCEEEec
Confidence            5555666666664

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=92.03  E-value=0.65  Score=33.86  Aligned_cols=92  Identities=20%  Similarity=0.173  Sum_probs=57.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHc----CC---C------EE-eeC------CC---C
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSL----GA---D------LA-IDY------TK---E  206 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~----g~---~------~~-~~~------~~---~  206 (310)
                      +|.|.| -|-+|+++...+......+++++-.   +.+.+..+-++    |.   +      .+ ++.      ..   .
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            688999 9999999998777643467776644   34445555332    21   0      00 100      00   1


Q ss_pred             cccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          207 NIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       207 ~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      ...+...++|+|+||+|-   .+.+..++..+.+-+.+..+.
T Consensus        82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            111223489999999994   467778888888777776653

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.00  E-value=0.48  Score=38.58  Aligned_cols=91  Identities=13%  Similarity=0.153  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH----HHcCCCEEeeCCCCcccccCCCccEEEeCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL----RSLGADLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +...++.|+| +|..+.+.++.+...+.. ++.+..+++++.+.+    +..+.....+.     .+...++|+|+.|+.
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-----~~a~~~aDiV~taT~  196 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-----AEEASRCDVLVTTTP  196 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-----HHHHTSSSEEEECCC
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-----hhhhccccEEEEecc
Confidence            4457899999 999999888876665565 677888888876555    23443332221     222357999999986


Q ss_pred             ChH--HHHhhcccCCEEEEEeCCC
Q 021628          224 QCD--KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       224 ~~~--~~~~~l~~~G~~v~~g~~~  245 (310)
                      +..  --.+.++++-.+..+|.+.
T Consensus       197 s~~P~~~~~~l~~G~hv~~iGs~~  220 (320)
T d1omoa_         197 SRKPVVKAEWVEEGTHINAIGADG  220 (320)
T ss_dssp             CSSCCBCGGGCCTTCEEEECSCCS
T ss_pred             CcccccchhhcCCCCeEeecCCcc
Confidence            421  1225789998888888653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.87  E-value=0.085  Score=41.52  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=29.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      +.|||+|+++++|.+.++.+... |++|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~-Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAA-GHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEECChH
Confidence            45899999999999988877774 999999987654

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=91.66  E-value=0.29  Score=35.71  Aligned_cols=92  Identities=22%  Similarity=0.324  Sum_probs=55.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--ChhhHHHHHHc----CC-C-EE--------eeC------CCCcccc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSL----GA-D-LA--------IDY------TKENIED  210 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~~~~~~~~----g~-~-~~--------~~~------~~~~~~~  210 (310)
                      +|.|.| -|-+|+++...+......+++++-.  +.+.+..+-++    |. + .+        ++.      ...+..+
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            478889 9999999999877642356666654  33334444322    20 0 01        100      0011111


Q ss_pred             c---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          211 L---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       211 ~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .   ..++|+|+||+|.   .+.+..++..+.+-|.+..+.
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            1   1279999999993   467778898888777776654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.35  Score=32.82  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .++|+|.| +|.+|+=+++.++.+ |.+|.++.+.+
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGL-GAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhcc-ccEEEEEeecc
Confidence            47899999 999999999988886 99999998754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=91.57  E-value=0.12  Score=40.92  Aligned_cols=48  Identities=25%  Similarity=0.299  Sum_probs=34.6

Q ss_pred             cCCCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhhH-HHH-HHcC
Q 021628          148 FSAGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAKL-DLL-RSLG  196 (310)
Q Consensus       148 ~~~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~-~~~g  196 (310)
                      .-.|+++||+|++|  ++|.+.++-+... |++|+++.++++++ +.+ ++++
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~-Ga~Vil~~~~~~~~~~~~~~~~~   54 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQ-GAQLVLTGFDRLRLIQRITDRLP   54 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHT-TCEEEEEECSCHHHHHHHHTTSS
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHc-CCEEEEEeCChHHHHHHHHHHcC
Confidence            34689999999654  5998877655553 99999999887765 333 4455

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.48  E-value=0.48  Score=34.63  Aligned_cols=91  Identities=22%  Similarity=0.337  Sum_probs=58.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHc----C---CCEE-------eeCC------CCccc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSL----G---ADLA-------IDYT------KENIE  209 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~----g---~~~~-------~~~~------~~~~~  209 (310)
                      +|.|.| -|-+|++....+... +.+++++-.   +.+.+..+-++    |   .+..       ++.+      ..+..
T Consensus         2 kIgING-fGRIGR~~~R~~~~~-~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEM-GAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhC-CCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            578999 999999999988875 888887754   33455555332    2   1100       1100      01111


Q ss_pred             cc---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          210 DL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.   ..++|+||||+|.   .+.+..++..+.+-|.+..+.
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            11   2279999999994   478888898888888787653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.18  Score=37.99  Aligned_cols=39  Identities=26%  Similarity=0.345  Sum_probs=32.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      ++|.|+| +|.+|..-+.++... |.+|++.+.+++.++.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHH
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhC-CCcEEEEECChHHHHHH
Confidence            5899999 899999877766664 99999999999876544

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.22  E-value=0.63  Score=36.59  Aligned_cols=92  Identities=16%  Similarity=0.169  Sum_probs=59.3

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCC-C--EEeeCCCCcccccCCCccEE
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGA-D--LAIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~~~~~~dvv  218 (310)
                      ..+++|++|+-.+  .++|..++.+|+. ++++|++++.+++..+.+++    .+. +  .+++.+...+.. ...+|.|
T Consensus       103 ~~~~~g~~VlD~~--aG~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~-~~~~D~I  178 (260)
T d2frna1         103 KVAKPDELVVDMF--AGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRI  178 (260)
T ss_dssp             HHCCTTCEEEETT--CTTTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEE
T ss_pred             hhcCCccEEEECc--ceEcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc-CCCCCEE
Confidence            3468999999887  3456666677776 35799999999998888753    232 2  233333222221 2358876


Q ss_pred             EeC-CC-C---hHHHHhhcccCCEEEEE
Q 021628          219 FDA-VG-Q---CDKALKAVKEGGRVVSI  241 (310)
Q Consensus       219 i~~-~g-~---~~~~~~~l~~~G~~v~~  241 (310)
                      +-. -. +   +..+++.+++||.+...
T Consensus       179 i~~~p~~~~~~l~~a~~~l~~gG~lh~~  206 (260)
T d2frna1         179 LMGYVVRTHEFIPKALSIAKDGAIIHYH  206 (260)
T ss_dssp             EECCCSSGGGGHHHHHHHEEEEEEEEEE
T ss_pred             EECCCCchHHHHHHHHhhcCCCCEEEEE
Confidence            643 22 1   36788999999987544

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=91.10  E-value=0.56  Score=36.70  Aligned_cols=96  Identities=14%  Similarity=0.101  Sum_probs=64.8

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc-CC-CE--EeeCCCCcccccCCCccEEE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL-GA-DL--AIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~-g~-~~--~~~~~~~~~~~~~~~~dvvi  219 (310)
                      +.....++.+||=+|  .+.|..+..++... ..+|..++.+++-++.+++. .. ..  +...+-.++....+.+|+|+
T Consensus        87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~  163 (254)
T d1xtpa_          87 ASLPGHGTSRALDCG--AGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIV  163 (254)
T ss_dssp             HTSTTCCCSEEEEET--CTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEE
T ss_pred             hhCCCCCCCeEEEec--ccCChhhHHHHhhc-CceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEE
Confidence            445556778898888  45688888888774 67899999999998888653 22 11  22222223333345799998


Q ss_pred             eCCC--C---------hHHHHhhcccCCEEEEEe
Q 021628          220 DAVG--Q---------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       220 ~~~g--~---------~~~~~~~l~~~G~~v~~g  242 (310)
                      ....  +         ++++.+.|+++|.++..-
T Consensus       164 ~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            6532  2         256778899999998764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.88  E-value=0.11  Score=37.41  Aligned_cols=81  Identities=19%  Similarity=0.153  Sum_probs=48.4

Q ss_pred             EEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC--ChHHHHhhc
Q 021628          155 LVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALKAV  232 (310)
Q Consensus       155 lI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~~~~~~l  232 (310)
                      -+.| +|.+|.+.+..++.. +..+.+..|++++.+.+.+.+.....     +..+..+..|+||-|+.  ...+.+..+
T Consensus         3 gfIG-~G~mg~~l~~~L~~~-~~~~~v~~R~~~~~~~l~~~~~~~~~-----~~~~~~~~~DiVil~v~d~~i~~v~~~l   75 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAA-----TLEKHPELNGVVFVIVPDRYIKTVANHL   75 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCC-----SSCCCCC---CEEECSCTTTHHHHHTTT
T ss_pred             EEEe-CcHHHHHHHHHHHhC-CCEEEEEeCChhhhcchhhccccccc-----chhhhhccCcEEEEeccchhhhHHHhhh
Confidence            3678 899998877766552 33345788999999888665532221     22334567899999986  356777777


Q ss_pred             ccC-CEEEEEe
Q 021628          233 KEG-GRVVSII  242 (310)
Q Consensus       233 ~~~-G~~v~~g  242 (310)
                      +.. ..++.++
T Consensus        76 ~~~~~ivi~~s   86 (153)
T d2i76a2          76 NLGDAVLVHCS   86 (153)
T ss_dssp             CCSSCCEEECC
T ss_pred             cccceeeeecc
Confidence            644 4445554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.75  E-value=0.38  Score=32.62  Aligned_cols=36  Identities=19%  Similarity=0.281  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ..++++|.| +|.+|+=+++.+..+ |.+|+++.+.+.
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~-G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANF-GTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             cCCeEEEEC-CCccceeeeeeeccc-ccEEEEEEecce
Confidence            347899999 999999999988886 999999987554

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=90.69  E-value=0.47  Score=36.25  Aligned_cols=90  Identities=20%  Similarity=0.248  Sum_probs=58.7

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCC--EEeeCCCCcccccCCCccEEEeCCC-
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGAD--LAIDYTKENIEDLPEKFDVVFDAVG-  223 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~dvvi~~~g-  223 (310)
                      +.-++++||=+|  .+.|..+..+++.  |.+|+.++.+++..+.+++...+  ..+...-++.. ..+.+|+|+..-- 
T Consensus        17 ~~~~~~~VLDiG--cG~G~~~~~l~~~--g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~-~~~~fD~I~~~~vl   91 (225)
T d2p7ia1          17 PFFRPGNLLELG--SFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ-LPRRYDNIVLTHVL   91 (225)
T ss_dssp             GGCCSSCEEEES--CTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC-CSSCEEEEEEESCG
T ss_pred             hhCCCCcEEEEe--CCCcHHHHHHHHc--CCeEEEEeCcHHHhhhhhcccccccccccccccccc-ccccccccccccee
Confidence            345577899998  3457777777664  78999999999999988654322  22222222222 2457999985421 


Q ss_pred             ----C----hHHHH-hhcccCCEEEEE
Q 021628          224 ----Q----CDKAL-KAVKEGGRVVSI  241 (310)
Q Consensus       224 ----~----~~~~~-~~l~~~G~~v~~  241 (310)
                          +    +.+.. ++|+|+|.++..
T Consensus        92 eh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          92 EHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             GGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             EecCCHHHHHHHHHHHhcCCCceEEEE
Confidence                2    24555 578999999865

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.61  E-value=0.12  Score=41.22  Aligned_cols=34  Identities=24%  Similarity=0.230  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      +++|+|+| +|..|+.|+..++.. |.+|+++..++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~-G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIH-GLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-SCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence            57899999 999999988888775 99999998653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.56  E-value=0.5  Score=35.49  Aligned_cols=72  Identities=13%  Similarity=0.126  Sum_probs=47.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC-CEEeeCCCCcccccCCCccEEEeCC
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA-DLAIDYTKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~dvvi~~~  222 (310)
                      ....+ .|++||=+| +| .|.+++.+++. +..+|+.++.+++..+.+++.-. ..++..   +.....+.+|+||..-
T Consensus        43 ~~~dl-~Gk~VLDlG-cG-tG~l~i~a~~~-ga~~V~~vDid~~a~~~ar~N~~~~~~~~~---D~~~l~~~fD~Vi~NP  115 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAG-TG-NGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVA---DVSEISGKYDTWIMNP  115 (197)
T ss_dssp             HHTSS-BTSEEEEET-CT-TCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEEC---CGGGCCCCEEEEEECC
T ss_pred             HcCCC-CCCEEEEeC-CC-CcHHHHHHHHc-CCCcccccccCHHHHHHHHHccccccEEEE---ehhhcCCcceEEEeCc
Confidence            34444 689999998 55 37777666664 23579999999998888866332 233332   2344456899999763

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.52  E-value=0.55  Score=32.55  Aligned_cols=70  Identities=16%  Similarity=0.141  Sum_probs=45.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC--ChHHHHh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG--QCDKALK  230 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~~~~~  230 (310)
                      +|.|+|++|.+|.+..+++... +.+++.......                     ......+|++||.+.  .....++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~-~~~l~~~id~~~---------------------~~~~~~~DVvIDFS~p~~~~~~l~   59 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEK-GHELVLKVDVNG---------------------VEELDSPDVVIDFSSPEALPKTVD   59 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEEETTE---------------------EEECSCCSEEEECSCGGGHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcC-CCeEEEEECCCc---------------------HHHhccCCEEEEecCHHHHHHHHH
Confidence            5899998999999988888874 777665432110                     111245789999874  3455565


Q ss_pred             hcccCCEEEEEeCC
Q 021628          231 AVKEGGRVVSIIGS  244 (310)
Q Consensus       231 ~l~~~G~~v~~g~~  244 (310)
                      .+...+.-+..|..
T Consensus        60 ~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          60 LCKKYRAGLVLGTT   73 (128)
T ss_dssp             HHHHHTCEEEECCC
T ss_pred             HHHhcCCCEEEEcC
Confidence            55556666666643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.50  E-value=0.14  Score=40.03  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      ..++|+|.| +|..|++++..++.. |.+|+++++++
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~-G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDA-GVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            357899999 999999988888775 99999998753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.42  E-value=0.89  Score=32.44  Aligned_cols=89  Identities=19%  Similarity=0.309  Sum_probs=57.4

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEec--ChhhH-HHHHHcCCCEEeeCCCCcccc-----------------
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVF-GASKVAATS--STAKL-DLLRSLGADLAIDYTKENIED-----------------  210 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~--~~~~~-~~~~~~g~~~~~~~~~~~~~~-----------------  210 (310)
                      .+|.|+|++|.+|.-++.+.+... ..+|+.+..  +-+.+ +.+.+|.+.+++-.++.....                 
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            378999999999999999988732 246766654  33333 334678887776443221100                 


Q ss_pred             --------cCCCccEEEeCC-C--ChHHHHhhcccCCEEEE
Q 021628          211 --------LPEKFDVVFDAV-G--QCDKALKAVKEGGRVVS  240 (310)
Q Consensus       211 --------~~~~~dvvi~~~-g--~~~~~~~~l~~~G~~v~  240 (310)
                              ....+|+|+.+. |  .+...+..++.+-++..
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                    013689999985 5  35777777776665543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=90.35  E-value=0.15  Score=42.02  Aligned_cols=38  Identities=21%  Similarity=0.293  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|.+|||+|++|-+|...+..+... |.+|++++++..+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~-g~~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEECCCCc
Confidence            4789999999999999999988885 9999999986543

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.35  E-value=2.3  Score=32.20  Aligned_cols=109  Identities=16%  Similarity=0.225  Sum_probs=62.5

Q ss_pred             EEEEEcCCcchHHH-HHHHHHhhcCCcEEEE-ecChhhHHHH-HHcCCC--EEeeCCCCccccc--CCCccEEEeCCCC-
Q 021628          153 SILVLGGAGGVGTM-VIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGAD--LAIDYTKENIEDL--PEKFDVVFDAVGQ-  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~-~~~~~~~~~~-~~~g~~--~~~~~~~~~~~~~--~~~~dvvi~~~g~-  224 (310)
                      +|.|.| +|.+|.- .+...+...+.+++.+ ++++++.+.+ ++++..  .+..+.+  +.+.  ...+|+|+-++.. 
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--~~ell~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--FDKIAKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--GGGGGGCTTCCEEEECSCGG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc--hhhhcccccceeeeeccchh
Confidence            789999 8888863 4444444346777755 5588876655 667643  2222322  2222  3478999988873 


Q ss_pred             --hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 --CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 --~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                        .+.+.++|.. |+=+.+..+.         ..+.+...+++++.++....
T Consensus       112 ~H~~~~~~al~~-gk~v~~EKPl---------a~~~~e~~~l~~~a~~~~~~  153 (221)
T d1h6da1         112 LHAEFAIRAFKA-GKHVMCEKPM---------ATSVADCQRMIDAAKAANKK  153 (221)
T ss_dssp             GHHHHHHHHHHT-TCEEEECSSC---------CSSHHHHHHHHHHHHHHTCC
T ss_pred             hhhhHHHHhhhc-chhhhcCCCc---------cCCHHHHHHHHHHHHhcCCc
Confidence              4667777765 4555554322         12334555555655554443

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.24  E-value=0.18  Score=40.54  Aligned_cols=38  Identities=29%  Similarity=0.286  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCc--chHHHHHHHHHhhcCCcEEEEecChhh
Q 021628          150 AGKSILVLGGAG--GVGTMVIQLAKHVFGASKVAATSSTAK  188 (310)
Q Consensus       150 ~g~~vlI~g~~g--~~G~~a~~la~~~~g~~vi~~~~~~~~  188 (310)
                      .|+++||+|++|  ++|.+.++.+... |++|++..+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~-Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAA-GAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHT-TCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEeCchhh
Confidence            688999999766  8999977776664 9999998886553

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.04  E-value=1.7  Score=31.73  Aligned_cols=111  Identities=15%  Similarity=0.171  Sum_probs=68.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEE-ecChhhHHHH-HHcCCC---EEeeCCCCcccccCCCccEEEeCCCC---
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGAD---LAIDYTKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~-~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      ++.|.| +|.+|...+...+...+.+++++ +.++++.+.+ ++++..   .+++.-++.+.  ...+|+|+-+++.   
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~~iD~v~I~tp~~~h   79 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLE--DPEIDALYVPLPTSLH   79 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHH--CTTCCEEEECCCGGGH
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhh--ccccceeeecccchhh
Confidence            578999 89999887777776445677755 5577776555 556532   23321111111  2468999998873   


Q ss_pred             hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          225 CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       225 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      .+.+..++.. |.=+.+..+.         ..+.+.+++++++.++......
T Consensus        80 ~~~~~~~l~~-g~~v~~EKP~---------~~~~~e~~~l~~~~~~~~~~~~  121 (184)
T d1ydwa1          80 VEWAIKAAEK-GKHILLEKPV---------AMNVTEFDKIVDACEANGVQIM  121 (184)
T ss_dssp             HHHHHHHHTT-TCEEEECSSC---------SSSHHHHHHHHHHHHTTTCCEE
T ss_pred             cchhhhhhhc-cceeeccccc---------ccCHHHHHHHHHHHHhhCCEEE
Confidence            4666677764 4555554322         1234677778888887766554

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.86  E-value=0.14  Score=38.43  Aligned_cols=78  Identities=9%  Similarity=0.144  Sum_probs=50.2

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC--C----EEeeCC---CCcccccCCCccEEEeCC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA--D----LAIDYT---KENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~--~----~~~~~~---~~~~~~~~~~~dvvi~~~  222 (310)
                      .+|.|+| +|..|.+.+.++.. .|-+|++..++++..+.+++-+.  .    ..+...   ..++.+..+++|++|-++
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~-~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiav   85 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSK-KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI   85 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHT-TEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECS
T ss_pred             ceEEEEC-CCHHHHHHHHHHHH-cCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcC
Confidence            3699999 99999997777666 37789999999998888864331  1    111000   011222235789999998


Q ss_pred             CC--hHHHHhh
Q 021628          223 GQ--CDKALKA  231 (310)
Q Consensus       223 g~--~~~~~~~  231 (310)
                      ++  ++..++.
T Consensus        86 Ps~~~~~~~~~   96 (189)
T d1n1ea2          86 PTQFLRGFFEK   96 (189)
T ss_dssp             CHHHHHHHHHH
T ss_pred             cHHHHHHHHHH
Confidence            74  3444443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.81  E-value=0.15  Score=37.97  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTA  187 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~  187 (310)
                      +++|+|.| +|..|+.|+..++.. |. .|+++.+++.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~-G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARL-GYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHT-TCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHC-CCCeEEEEEecCc
Confidence            57899999 999999999888885 87 5888887544

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=89.74  E-value=1.6  Score=30.73  Aligned_cols=50  Identities=18%  Similarity=0.239  Sum_probs=38.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEee
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAID  202 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~  202 (310)
                      .+|.|+|+.|.+|...+..++.. |.+|.+.+++++........+.+.++.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~-G~~V~~~d~~~~~~~~~~~~~~~~v~~   59 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDWAVAESILANADVVIV   59 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCGGGHHHHHTTCSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHc-CCCcEecccccccccchhhhhcccccc
Confidence            58999998899999888877774 999999999777655554455555543

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.73  E-value=0.99  Score=35.05  Aligned_cols=95  Identities=19%  Similarity=0.297  Sum_probs=59.1

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCCC-EE--eeCCCCcccccCCCcc
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGAD-LA--IDYTKENIEDLPEKFD  216 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~~-~~--~~~~~~~~~~~~~~~d  216 (310)
                      ....+....+||=+|  ++.|..+..+++...+.++++++. ++..+.+    .+.+.. .+  +..+  -+.....++|
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~D--~~~~~~~~~D  148 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGD--FFEPLPRKAD  148 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSSCEE
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhcccc--chhhcccchh
Confidence            344567778999888  567889999998743567777775 4444333    333421 11  1111  1223345799


Q ss_pred             EEEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628          217 VVFDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       217 vvi~~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                      +|+-..-  .         ++++.+.|+|+|+++....
T Consensus       149 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         149 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             heeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            9885432  1         3677889999999998753

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.72  E-value=0.2  Score=40.22  Aligned_cols=92  Identities=17%  Similarity=0.149  Sum_probs=59.5

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHc----CCC------EEeeCCCCcc---ccc
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSL----GAD------LAIDYTKENI---EDL  211 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~----g~~------~~~~~~~~~~---~~~  211 (310)
                      ..+.+++.+||=+|  -+.|..+..+++.  |.+|+.++.+++-++.+++.    +..      .+.+..-...   ...
T Consensus        51 ~l~~~~~~~vLD~G--cG~G~~~~~la~~--g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          51 LLRQHGCHRVLDVA--CGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHTTCCEEEESS--CTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HhhhcCCCEEEEec--CCCcHHHHHHHHc--CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            34456778998887  4568888889885  88999999999988777432    111      0111100000   012


Q ss_pred             CCCccEEEeCCC---C--------------hHHHHhhcccCCEEEE
Q 021628          212 PEKFDVVFDAVG---Q--------------CDKALKAVKEGGRVVS  240 (310)
Q Consensus       212 ~~~~dvvi~~~g---~--------------~~~~~~~l~~~G~~v~  240 (310)
                      ...+|.|+....   .              ++.+.+.|+|||.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            357999986432   1              3677889999999986

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.88  Score=32.26  Aligned_cols=89  Identities=10%  Similarity=0.049  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH-HHHHH---cCCCEEeeCCCCccc----ccCCCccEEEeCC
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL-DLLRS---LGADLAIDYTKENIE----DLPEKFDVVFDAV  222 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~-~~~~~---~g~~~~~~~~~~~~~----~~~~~~dvvi~~~  222 (310)
                      -++++|.| .|.+|...++.+... |.++++++.++++. +.+++   .+...+ ..+..+..    ...+.+|.++-++
T Consensus         3 knHiII~G-~g~~g~~l~~~L~~~-~~~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           3 KDHFIVCG-HSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEeccchhHHHHHHHhhcCCcEEE-EccCcchHHHHHhccccCCEEEEcc
Confidence            46899999 899999999988885 99999998877643 23332   344333 33222211    1234789999888


Q ss_pred             CCh------HHHHhhcccCCEEEEEe
Q 021628          223 GQC------DKALKAVKEGGRVVSII  242 (310)
Q Consensus       223 g~~------~~~~~~l~~~G~~v~~g  242 (310)
                      ++-      -...+.+.+.-+++...
T Consensus        80 ~~d~~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          80 DNDADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             ccHHHHHHHHHHHHHhCCCCceEEEE
Confidence            742      23445556666666553

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.00  E-value=0.14  Score=38.45  Aligned_cols=103  Identities=21%  Similarity=0.214  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC-----
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ-----  224 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~-----  224 (310)
                      .+.+|.|+| .|.+|...++.++.. |.+|+..++......     ..  ....  +++.+..+..|++..+.+.     
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~f-g~~v~~~d~~~~~~~-----~~--~~~~--~~l~ell~~sDii~i~~plt~~T~  111 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESL-GMYVYFYDIENKLPL-----GN--ATQV--QHLSDLLNMSDVVSLHVPENPSTK  111 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSCCCCC-----TT--CEEC--SCHHHHHHHCSEEEECCCSSTTTT
T ss_pred             cceEEEEee-cccchhhhhhhcccc-cceEeeccccccchh-----hh--hhhh--hhHHHHHhhccceeecccCCcchh
Confidence            578999999 999999999999994 999999987533211     00  0000  1233333467888877651     


Q ss_pred             -h--HHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeE
Q 021628          225 -C--DKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKA  275 (310)
Q Consensus       225 -~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (310)
                       +  .+.++.|+++..+|.++.-.            -=+.+++++.+.++++.-
T Consensus       112 ~li~~~~l~~mk~~a~lIN~aRG~------------lvde~aL~~aL~~~~~~~  153 (188)
T d1sc6a1         112 NMMGAKEISLMKPGSLLINASRGT------------VVDIPALADALASKHLAG  153 (188)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSCSS------------SBCHHHHHHHHHTTSEEE
T ss_pred             hhccHHHHhhCCCCCEEEEcCcHH------------hhhhHHHHHHHHcCCceE
Confidence             1  78899999999999886311            113456678888888874

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=88.96  E-value=0.6  Score=34.94  Aligned_cols=87  Identities=22%  Similarity=0.324  Sum_probs=58.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCC---
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVG---  223 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g---  223 (310)
                      ...++++||=+| +| .|..+..+      .+++.++.+++.++.+++-+... +..+.++.....+.+|+|+....   
T Consensus        33 ~~~~~~~vLDiG-cG-~G~~~~~~------~~~~giD~s~~~~~~a~~~~~~~-~~~d~~~l~~~~~~fD~I~~~~~l~h  103 (208)
T d1vlma_          33 CLLPEGRGVEIG-VG-TGRFAVPL------KIKIGVEPSERMAEIARKRGVFV-LKGTAENLPLKDESFDFALMVTTICF  103 (208)
T ss_dssp             HHCCSSCEEEET-CT-TSTTHHHH------TCCEEEESCHHHHHHHHHTTCEE-EECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred             hhCCCCeEEEEC-CC-Cccccccc------ceEEEEeCChhhccccccccccc-cccccccccccccccccccccccccc
Confidence            346677899998 44 35443333      24678899999999988765543 33333333333467999986643   


Q ss_pred             --C----hHHHHhhcccCCEEEEEe
Q 021628          224 --Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       224 --~----~~~~~~~l~~~G~~v~~g  242 (310)
                        +    ++++.+.|+|+|+++...
T Consensus       104 ~~d~~~~l~~~~~~L~pgG~l~i~~  128 (208)
T d1vlma_         104 VDDPERALKEAYRILKKGGYLIVGI  128 (208)
T ss_dssp             SSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhhhhcCCCCceEEEEe
Confidence              2    368889999999998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=88.92  E-value=0.24  Score=36.92  Aligned_cols=40  Identities=20%  Similarity=0.175  Sum_probs=32.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL  192 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~  192 (310)
                      =.+|.|+| +|.+|..-+.++... |.+|++.+.+++.++..
T Consensus         4 I~~vaViG-aG~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLG-AGIMGGGIAYQSASK-GTPILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEEC-CHHHHHHHHHHHHHT-TCCEEEECSSHHHHHHH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhC-CCeEEEEECCHHHHhhh
Confidence            36799999 899998877666664 99999999998876554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.62  E-value=0.72  Score=37.52  Aligned_cols=95  Identities=20%  Similarity=0.160  Sum_probs=59.3

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCC---EEeeCCCCcc----cccCCC
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGAD---LAIDYTKENI----EDLPEK  214 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~----~~~~~~  214 (310)
                      ..+++|++||=.+  ...|..++.+++. +..+|+.++.+++..+.+++    .|..   .+...+..+.    ....+.
T Consensus       141 ~~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         141 KWVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GGCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred             hhcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCC
Confidence            3467899988776  3455566666665 23479999999998888753    3432   2222221111    112457


Q ss_pred             ccEEEeCCC----C--------------hHHHHhhcccCCEEEEEeC
Q 021628          215 FDVVFDAVG----Q--------------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       215 ~dvvi~~~g----~--------------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ||+|+--.+    +              ...+++.|+|||.++.+..
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            999985322    1              1456789999999998753

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.58  E-value=0.1  Score=38.20  Aligned_cols=93  Identities=19%  Similarity=0.197  Sum_probs=52.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCC----CEEeeCCCCcccccCCCccEEEeCCC--ChH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGA----DLAIDYTKENIEDLPEKFDVVFDAVG--QCD  226 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~dvvi~~~g--~~~  226 (310)
                      +|.|.|+.|-+|++.++.+....+.+++.....+.....-++++.    ...-..-..+.......+|++||.+.  ...
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p~~~~   85 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTL   85 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccHHHHH
Confidence            589999889999999998876445666655433222111111110    00000001122233457899999975  345


Q ss_pred             HHHhhcccCCEEEEEeCCC
Q 021628          227 KALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.++.....+.-+.+|..+
T Consensus        86 ~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          86 NHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             HHHHHHHHTTCEEEECCCC
T ss_pred             HHHHHHHhccceeEEecCC
Confidence            6666666677777777433

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.51  E-value=0.96  Score=32.08  Aligned_cols=70  Identities=21%  Similarity=0.173  Sum_probs=42.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHH-HHc------CCCE-EeeCCCCcccccCCCccEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLL-RSL------GADL-AIDYTKENIEDLPEKFDVV  218 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~-~~~------g~~~-~~~~~~~~~~~~~~~~dvv  218 (310)
                      ..+.+|.|.| +|.+|...+..+... +.  +++.++.++++.+-. .++      .... .+..  .+ .+..+++|+|
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~-~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~d-~~~l~daDvv   78 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQ-GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GD-YDDCRDADLV   78 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CC-GGGTTTCSEE
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhc-CCCceEEEEeeccccccchhccHhhCccccCCCeEEEE--CC-HHHhccceeE
Confidence            4567899999 699998877766653 53  677778787763211 111      1111 1111  11 2335688999


Q ss_pred             EeCCC
Q 021628          219 FDAVG  223 (310)
Q Consensus       219 i~~~g  223 (310)
                      +.++|
T Consensus        79 vitag   83 (148)
T d1ldna1          79 VICAG   83 (148)
T ss_dssp             EECCS
T ss_pred             EEecc
Confidence            98877

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=88.42  E-value=0.27  Score=40.39  Aligned_cols=39  Identities=33%  Similarity=0.429  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhH
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKL  189 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~  189 (310)
                      .-++|+|+|++|.+|...+..+... |.+|++++|+.++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~-G~~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC-CCeEEEEECCcchh
Confidence            3578999999999999988888875 99999999976654

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=88.42  E-value=0.49  Score=37.09  Aligned_cols=96  Identities=21%  Similarity=0.282  Sum_probs=60.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHH----HHcCC-CEE-eeCCCCcccccCCCccE
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLL----RSLGA-DLA-IDYTKENIEDLPEKFDV  217 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~----~~~g~-~~~-~~~~~~~~~~~~~~~dv  217 (310)
                      +...+....+||=+|  ++.|..+..+++..-+.++++++. ++-.+.+    ++.+. +.+ +... ..+.....++|+
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~~~~p~~~D~  150 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFFKPLPVTADV  150 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTTSCCSCCEEE
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-eccccccccchh
Confidence            344566778888887  677899999999743568888886 4433333    33442 222 1111 112233457899


Q ss_pred             EEeCCC--C---------hHHHHhhcccCCEEEEEeC
Q 021628          218 VFDAVG--Q---------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       218 vi~~~g--~---------~~~~~~~l~~~G~~v~~g~  243 (310)
                      ++-..-  .         ++++.+.|+|+|+++....
T Consensus       151 v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         151 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            875421  1         3677889999999998764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=88.35  E-value=0.22  Score=40.77  Aligned_cols=71  Identities=14%  Similarity=0.045  Sum_probs=41.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCC--C-Cccc-ccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYT--K-ENIE-DLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~--~-~~~~-~~~~~~dvvi~~~g  223 (310)
                      +|||+|++|-+|...++.+...+..+|++++....+...+.+..--..+..+  + .... ....++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            5899999999999888766553236888887755443333221111122221  1 1111 12347999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.27  E-value=0.29  Score=39.37  Aligned_cols=38  Identities=24%  Similarity=0.284  Sum_probs=31.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      ......+|+|+| +|..|+.|+..++.. |.+|+++..++
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~~-G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAGA-GHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence            445567999999 999999988888875 99999998753

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=88.15  E-value=0.43  Score=35.38  Aligned_cols=91  Identities=18%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-e-C-CCCcccccCCCccEEEeCCCC--hHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-D-Y-TKENIEDLPEKFDVVFDAVGQ--CDK  227 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-~-~-~~~~~~~~~~~~dvvi~~~g~--~~~  227 (310)
                      +|.|+|++|-+|+-.++++..+-..++..+..+...-..+.+....... + . ..........+.|++|.|.++  ...
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~s~~   86 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGTTQE   86 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSHHHH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccchHHH
Confidence            6899999999999999998875334555444322221112211111000 0 0 000111223578999999875  355


Q ss_pred             HHhhcccCCEEEEEeC
Q 021628          228 ALKAVKEGGRVVSIIG  243 (310)
Q Consensus       228 ~~~~l~~~G~~v~~g~  243 (310)
                      ....+...+..+....
T Consensus        87 ~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          87 IIKGLPQELKIVDLSA  102 (183)
T ss_dssp             HHHTSCSSCEEEECSS
T ss_pred             HHHHHHhcCcccccch
Confidence            6677888888876654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=87.90  E-value=0.24  Score=39.21  Aligned_cols=35  Identities=20%  Similarity=0.394  Sum_probs=30.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .+|||+|++|-+|...+..+... |.+|++++++..
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~-G~~V~~l~R~~~   38 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDL-GHPTFLLVREST   38 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEECCCc
Confidence            57999999999999998888774 999999998544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=87.89  E-value=0.49  Score=38.52  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=27.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      +|||+|++|-+|...+..+... |.+|+++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~-g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQN-GHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHC-cCEEEEEEC
Confidence            5899999999999988887774 899999875

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.81  E-value=2.2  Score=30.84  Aligned_cols=92  Identities=21%  Similarity=0.232  Sum_probs=55.8

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHc----CC-C-EE--------eeC------CCCccc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSL----GA-D-LA--------IDY------TKENIE  209 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~----g~-~-~~--------~~~------~~~~~~  209 (310)
                      +|.|.| -|-+|++....+......+++++-.   +.+.+..+-++    |. . .+        ++.      ...++.
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578889 9999999998877533456666643   34455555332    21 0 01        110      011111


Q ss_pred             cc---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          210 DL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 ~~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.   ..++|+|+||+|.   .+.+..++..+.+-|.+..+.
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  122 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP  122 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence            11   1289999999994   367778888888777776654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=87.78  E-value=0.59  Score=33.66  Aligned_cols=88  Identities=23%  Similarity=0.364  Sum_probs=51.5

Q ss_pred             EEEEEcCCcchHH-HHHHHHHhhcCCcEEEEe-cChh--hHHHHHHcCCCEEeeCCCCccccc--CCCccEEEeCCCC--
Q 021628          153 SILVLGGAGGVGT-MVIQLAKHVFGASKVAAT-SSTA--KLDLLRSLGADLAIDYTKENIEDL--PEKFDVVFDAVGQ--  224 (310)
Q Consensus       153 ~vlI~g~~g~~G~-~a~~la~~~~g~~vi~~~-~~~~--~~~~~~~~g~~~~~~~~~~~~~~~--~~~~dvvi~~~g~--  224 (310)
                      +|.|+| +|.+|. ...++.+.....+++++. ++.+  ...++++++.......- +++.+.  ..++|+||.+++.  
T Consensus         6 rvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~-d~l~~~~~~~~iDiVf~ATpag~   83 (157)
T d1nvmb1           6 KVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGV-EGLIKLPEFADIDFVFDATSASA   83 (157)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHH-HHHHHSGGGGGEEEEEECSCHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccce-eeeeecccccccCEEEEcCCchh
Confidence            689999 999987 456777764344666664 4543  34667788865432211 111111  2479999999863  


Q ss_pred             -hH--HHHhhcccCCEEEEEe
Q 021628          225 -CD--KALKAVKEGGRVVSII  242 (310)
Q Consensus       225 -~~--~~~~~l~~~G~~v~~g  242 (310)
                       ..  ...+.+..|-.++...
T Consensus        84 h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          84 HVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             HHHHHHHHHHHCTTCEEEECS
T ss_pred             HHHhHHHHHHHHcCCEEEEcc
Confidence             33  3344455555555554

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=87.73  E-value=2.6  Score=30.51  Aligned_cols=92  Identities=22%  Similarity=0.285  Sum_probs=53.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec--ChhhHHHHHHc----C---CCEEe-------e------CCCCccc-
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS--STAKLDLLRSL----G---ADLAI-------D------YTKENIE-  209 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~--~~~~~~~~~~~----g---~~~~~-------~------~~~~~~~-  209 (310)
                      +|.|.| -|-+|++....+......+++++-.  +.+.+..+-++    |   ...-+       +      +...++. 
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578889 9999999887776522346666543  33334443222    1   00000       0      0111111 


Q ss_pred             --ccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          210 --DLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       210 --~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                        +...++|+|+||+|.   .+.+..+|..+.+-|.+..+.
T Consensus        82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~  122 (171)
T d3cmco1          82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA  122 (171)
T ss_dssp             CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence              112379999999994   467778888887667776553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.70  E-value=0.31  Score=38.33  Aligned_cols=33  Identities=18%  Similarity=0.312  Sum_probs=28.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      +|||+|++|-+|...+..++.. |.+|+.+++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~-g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGK-NVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS-SEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhC-CCEEEEeechh
Confidence            5899999999999999998884 99999998754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.69  E-value=0.28  Score=39.58  Aligned_cols=44  Identities=27%  Similarity=0.275  Sum_probs=33.8

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLG  196 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g  196 (310)
                      ++|||+|++|-+|...+..+... |.+|+++++...  ....++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~-g~~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC-cCEEEEEECCCCcccHHHHHHhc
Confidence            48999999999999998877774 999999987432  334455544

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.65  E-value=1.4  Score=32.07  Aligned_cols=92  Identities=21%  Similarity=0.255  Sum_probs=54.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhc--CCcEEEEec--ChhhHHHHHHc----CC-C-EE--------eeC------CCCcc
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVF--GASKVAATS--STAKLDLLRSL----GA-D-LA--------IDY------TKENI  208 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~--g~~vi~~~~--~~~~~~~~~~~----g~-~-~~--------~~~------~~~~~  208 (310)
                      +|.|.| -|-+|+++...+....  ..+++++-.  +.+.+..+-++    |. . .+        ++.      ...+.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999 9999999998765422  356666643  44445554332    21 0 01        000      00011


Q ss_pred             ccc---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          209 EDL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       209 ~~~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      .+.   ..++|+||||+|.   .+.+..++..|.+-|.+..+.
T Consensus        81 ~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~  123 (169)
T d1hdgo1          81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA  123 (169)
T ss_dssp             GGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             hhCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence            111   1279999999994   467777888887777776654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=87.50  E-value=0.43  Score=32.50  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=31.3

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .++..++|+|.| +|.+|+=.+..++.+ |.+|.++.+.+
T Consensus        18 ~l~~p~~v~IiG-gG~iG~E~A~~l~~~-g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVG-SGYIAVELINVIKRL-GIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEEC-CSHHHHHHHHHHHTT-TCEEEEECSSS
T ss_pred             ccCCCCEEEEEC-CchHHHHHHHHHHhc-cccceeeehhc
Confidence            344568999999 899999888888885 99999998753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=87.34  E-value=0.34  Score=39.98  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=28.3

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      +.|||+|++|-+|...+..+... |.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~-g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCEEEEEECCC
Confidence            56889999999999888888775 99999999843

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.33  E-value=3.6  Score=29.15  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=63.3

Q ss_pred             EEEEEcCCcchHHH-HHHHHHhhcCCcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hH
Q 021628          153 SILVLGGAGGVGTM-VIQLAKHVFGASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CD  226 (310)
Q Consensus       153 ~vlI~g~~g~~G~~-a~~la~~~~g~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~  226 (310)
                      +|.|.| +|.+|.- .+...+...+.+++.+ ++++++.+.+ ++++... ++    +..+....+|+|+-|++.   .+
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~----~~~~l~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD----SLSSLAASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS----SHHHHHTTCSEEEECSCTTHHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc----cchhhhhhcccccccccchhccc
Confidence            578999 8998863 5665555446677755 4577766554 6676542 22    122223468999988863   35


Q ss_pred             HHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCeeEE
Q 021628          227 KALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVKAI  276 (310)
Q Consensus       227 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (310)
                      .+..++..+ +=+.+.-+..         ...+...+++++..+......
T Consensus        77 ~~~~al~~g-k~V~~EKPla---------~~~~e~~~l~~~a~~~~~~~~  116 (164)
T d1tlta1          77 VVSTLLNAG-VHVCVDKPLA---------ENLRDAERLVELAARKKLTLM  116 (164)
T ss_dssp             HHHHHHHTT-CEEEEESSSC---------SSHHHHHHHHHHHHHTTCCEE
T ss_pred             ccccccccc-ceeecccccc---------CCHHHHHHHHHHHHHcCCcEE
Confidence            666666554 5555543221         223556666666666655443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.26  E-value=0.49  Score=32.37  Aligned_cols=38  Identities=16%  Similarity=0.332  Sum_probs=31.7

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ++++++++|.| +|.+|.=++..++.+ |.+|.++.+++.
T Consensus        27 ~~~~~~vvIIG-gG~iG~E~A~~l~~~-g~~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVG-GGVIGLELAATARTA-GVHVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred             hhcCCeEEEEC-cchhHHHHHHHhhcc-cceEEEEeeccc
Confidence            45779999999 899999888888885 999999986543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.16  E-value=0.39  Score=36.95  Aligned_cols=39  Identities=18%  Similarity=0.285  Sum_probs=32.4

Q ss_pred             ccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          147 AFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       147 ~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ..+.+++|+|.| +|..|+.++..++.. |.+|+++..+++
T Consensus        45 ~~~~~k~VvIIG-aGpAGl~aA~~l~~~-G~~v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVG-AGPSGSEAARVLMES-GYTVHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred             cccCCceEEEEc-ccHHHHHHHHHHHHh-ccceeeEeeccc
Confidence            335678999999 999999999988875 999999986543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=86.79  E-value=3.7  Score=29.54  Aligned_cols=107  Identities=14%  Similarity=0.096  Sum_probs=62.1

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEe-----eC-CCCcccccCCCccEEEeCCCC---
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAI-----DY-TKENIEDLPEKFDVVFDAVGQ---  224 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~-----~~-~~~~~~~~~~~~dvvi~~~g~---  224 (310)
                      |-++| .|.+|...+.-+.. .|.+|++.++++++.+.+.+.+.....     .. ....+.......+.++.+...   
T Consensus         4 IGvIG-lG~MG~~ma~~L~~-~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAE-KGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA   81 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHH-TTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred             EEEEe-ehHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcch
Confidence            67889 99999876665555 389999999999999888665532110     00 001111112344555555432   


Q ss_pred             ----hHHHHhhcccCCEEEEEeCCCCCCceEEEEecCHHHHHHHHHHHHcCCee
Q 021628          225 ----CDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSILEKLNPYFESGKVK  274 (310)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (310)
                          +......+.++..++..+.            ...+...++.+.+.+..+.
T Consensus        82 ~~~~~~~~~~~~~~~~iii~~st------------~~~~~~~~~~~~l~~~~~~  123 (178)
T d1pgja2          82 TDSTIEQLKKVFEKGDILVDTGN------------AHFKDQGRRAQQLEAAGLR  123 (178)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCC------------CCHHHHHHHHHHHHTTTCE
T ss_pred             hhhhhhhhhhhccccceecccCc------------cchhHHHHHHHHHhhccee
Confidence                2455566777777766542            3345555555555554443

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.77  E-value=0.53  Score=32.06  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      ..++++|.| +|.+|+=.++.++.+ |.+|.++.+++
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~-G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARL-GAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHc-CCceEEEEeec
Confidence            458899999 999999988888886 99999998654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=86.72  E-value=0.37  Score=38.18  Aligned_cols=39  Identities=23%  Similarity=0.213  Sum_probs=29.2

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLL  192 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~  192 (310)
                      .+||+|+++++|.+.++.+... |++|++..+ ++++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~-Ga~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAE-GYAVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHH
Confidence            3588999999999987766664 999998876 45544443

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.68  E-value=1.6  Score=29.79  Aligned_cols=86  Identities=8%  Similarity=0.082  Sum_probs=55.5

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCccc----ccCCCccEEEeCCCCh--
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKENIE----DLPEKFDVVFDAVGQC--  225 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~dvvi~~~g~~--  225 (310)
                      ++++|.| .|.+|...+..++   +..+++++.++++.+.++..|...+. .+..+..    .....++.++-+..+.  
T Consensus         1 kHivI~G-~g~~g~~l~~~L~---~~~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~   75 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR---GSEVFVLAEDENVRKKVLRSGANFVH-GDPTRVSDLEKANVRGARAVIVNLESDSE   75 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC---GGGEEEEESCTTHHHHHHHTTCEEEE-SCTTSHHHHHHTTCTTCSEEEECCSSHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc---CCCCEEEEcchHHHHHHHhcCccccc-cccCCHHHHHHhhhhcCcEEEEeccchhh
Confidence            3588999 7888876666543   55788889999999888888765443 3222211    1234688888887632  


Q ss_pred             ----HHHHhhcccCCEEEEEe
Q 021628          226 ----DKALKAVKEGGRVVSII  242 (310)
Q Consensus       226 ----~~~~~~l~~~G~~v~~g  242 (310)
                          -..++.+.|..+++...
T Consensus        76 n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          76 TIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHCSSSCEEEEC
T ss_pred             hHHHHHHHHHHCCCceEEEEE
Confidence                34455666776666553

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=86.62  E-value=0.35  Score=38.51  Aligned_cols=35  Identities=17%  Similarity=0.416  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      -.+|||+|++|-+|...+..+... |.+|++++|++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCC
Confidence            356999999999999988877775 89999998854

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=86.32  E-value=1.2  Score=32.51  Aligned_cols=92  Identities=20%  Similarity=0.203  Sum_probs=52.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcC--CcEEEEec--ChhhHHHHHHc----CC-C-EEeeCCCC---------------c
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFG--ASKVAATS--STAKLDLLRSL----GA-D-LAIDYTKE---------------N  207 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~--~~~~~~~~~~~----g~-~-~~~~~~~~---------------~  207 (310)
                      +|.|.| -|-+|+++...+.....  .+++++-.  +.+.+..+-++    |. + .+....+.               +
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            578899 99999999986654323  35555533  33334443222    21 1 11100000               0


Q ss_pred             cccc---CCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          208 IEDL---PEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       208 ~~~~---~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                      +.+.   ..|+|+|+||+|.   .+.+..+|..|.+-|.+..+.
T Consensus        81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~  124 (172)
T d1rm4a1          81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG  124 (172)
T ss_dssp             GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred             hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence            0111   1279999999994   467777888887666666544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.98  E-value=0.19  Score=41.57  Aligned_cols=72  Identities=17%  Similarity=0.123  Sum_probs=43.8

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcCCCEEeeCCCCc---ccccCCCccEEEeCCC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLGADLAIDYTKEN---IEDLPEKFDVVFDAVG  223 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~dvvi~~~g  223 (310)
                      .+-+|||+|++|-+|...+..+... |.+|+++++....... ...........+-.+   +.....++|.|+.+++
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~-g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHE-GHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC-cCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            4668999999999999988888874 9999998764332111 111111121111111   1222358999998764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=85.78  E-value=4.8  Score=29.05  Aligned_cols=87  Identities=15%  Similarity=0.093  Sum_probs=51.5

Q ss_pred             EEEEEcCCcchHHH-HHHHHHhhcC-CcEEEE-ecChhhHHHH-HHcCCCEEeeCCCCcccccCCCccEEEeCCCC---h
Q 021628          153 SILVLGGAGGVGTM-VIQLAKHVFG-ASKVAA-TSSTAKLDLL-RSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---C  225 (310)
Q Consensus       153 ~vlI~g~~g~~G~~-a~~la~~~~g-~~vi~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~  225 (310)
                      +|.|.| +|.+|.- .+...+...+ .+++.+ ++++++.+.+ ++++...+++.-++.+  ....+|+|+-|++.   .
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell--~~~~id~v~I~tp~~~h~   81 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELL--ESGLVDAVDLTLPVELNL   81 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHH--HSSCCSEEEECCCGGGHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccc--cccccceeeccccccccc
Confidence            578999 8988864 4565555323 356644 5677777665 5677655543211111  12468999988763   3


Q ss_pred             HHHHhhcccCCEEEEEeC
Q 021628          226 DKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       226 ~~~~~~l~~~G~~v~~g~  243 (310)
                      +.+..++.. |+-+.+.-
T Consensus        82 ~~~~~al~~-gk~V~~EK   98 (181)
T d1zh8a1          82 PFIEKALRK-GVHVICEK   98 (181)
T ss_dssp             HHHHHHHHT-TCEEEEES
T ss_pred             ccccccccc-chhhhcCC
Confidence            555555554 56666644

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=85.57  E-value=2.2  Score=33.75  Aligned_cols=97  Identities=14%  Similarity=0.268  Sum_probs=66.4

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeCCCCcccc----------
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDYTKENIED----------  210 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~----------  210 (310)
                      +....+++.+|+... +|..|++++..++.+ |.++++++.   ++.+.+.++.+|+..++...+.+...          
T Consensus        53 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          53 KRGEIKPGDVLIEAT-SGNTGIALAMIAALK-GYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HTTSCCTTSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeec-ccchhHHHHHHHHhc-CcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccc
Confidence            455666676665555 999999999999996 998777654   77788888999987544322211100          


Q ss_pred             ------------------------------cCCCccEEEeCCCC------hHHHHhhcccCCEEEEEe
Q 021628          211 ------------------------------LPEKFDVVFDAVGQ------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       211 ------------------------------~~~~~dvvi~~~g~------~~~~~~~l~~~G~~v~~g  242 (310)
                                                    ....+|.++.++|.      .-..++...+..+++-+.
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                                          01248899888763      256667778888887664

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.53  E-value=0.49  Score=32.44  Aligned_cols=37  Identities=19%  Similarity=0.309  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      +..++++|.| +|.+|+=.++.++.+ |.+|.++.+++.
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~-G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRI-GSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhc-CCeEEEEEEccc
Confidence            3458999999 999999999999986 999999977554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.53  E-value=1  Score=30.77  Aligned_cols=40  Identities=13%  Similarity=0.209  Sum_probs=32.1

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      ......+.+|+|.| +|.+|+-++..+..+ |.+|+++.+.+
T Consensus        24 ~~~~~~~k~vvViG-gG~iG~E~A~~l~~~-g~~Vtlie~~~   63 (123)
T d1nhpa2          24 KTVDPEVNNVVVIG-SGYIGIEAAEAFAKA-GKKVTVIDILD   63 (123)
T ss_dssp             HHTCTTCCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred             HhhccCCCEEEEEC-ChHHHHHHHHHhhcc-ceEEEEEEecC
Confidence            33445678999999 999999988888885 99999987653

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.53  E-value=1.9  Score=35.72  Aligned_cols=56  Identities=18%  Similarity=0.163  Sum_probs=43.1

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEeeC
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAIDY  203 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~~~  203 (310)
                      .+.+++++|+- .++|..|++.+..++.+ |.+++++..   ++++.+.++.+|++.+...
T Consensus       139 ~~~~~g~~VVe-aSSGN~GiAlA~~aa~l-Gik~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         139 RRVEKGSLVAD-ATSSNFGVALSAVARLY-GYRARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             TTSCTTCEEEE-ECCHHHHHHHHHHHHHT-TCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             hccCCCCEEEE-eCCcHHHHHHHHHHHHc-CCCEEEEeeccccccccccccccCcceeecC
Confidence            45677876554 44899999999999996 998877754   6678888899998766543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.47  E-value=0.65  Score=31.30  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .++++|.| +|.+|+=+++.++.+ |.+|.++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~-g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKL-GAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhc-ccceEEEeeecc
Confidence            47999999 999999988888886 999999876543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.46  E-value=0.56  Score=32.13  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      ..++++|.| +|.+|+=.++.++.+ |.+|.++.++
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~l-G~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGI-GLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhc-CCeEEEEEec
Confidence            446899999 999999999999986 9999998765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.22  E-value=0.65  Score=31.76  Aligned_cols=35  Identities=14%  Similarity=0.256  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      ..++++|.| +|.+|+=.++.+..+ |.+|.++.+++
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~l-G~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSRL-GSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHhh-CcceeEEEecc
Confidence            347999999 999999999988886 99999998654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.14  E-value=0.52  Score=36.67  Aligned_cols=35  Identities=26%  Similarity=0.447  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      -.|.+|+|.| .|.+|..+++++... |++|+.++++
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~-Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKM-GAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHc-CCeEEEeecc
Confidence            4789999999 999999999999996 9999887753

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=84.91  E-value=2.7  Score=30.55  Aligned_cols=92  Identities=20%  Similarity=0.237  Sum_probs=53.9

Q ss_pred             EEEEEcCCcchHHHHHHHHHhh---cCCcEEEEec--ChhhHHHHHHc----C---CCE-------Eee--------CCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHV---FGASKVAATS--STAKLDLLRSL----G---ADL-------AID--------YTK  205 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~---~g~~vi~~~~--~~~~~~~~~~~----g---~~~-------~~~--------~~~  205 (310)
                      +|.|.| -|-+|++....+...   ...+++++-.  +.+.+..+-++    |   ...       +++        ..+
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578889 999999988765431   1234555543  33344444322    1   100       011        100


Q ss_pred             -CcccccCCCccEEEeCCCC---hHHHHhhcccCCEEEEEeCCC
Q 021628          206 -ENIEDLPEKFDVVFDAVGQ---CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       206 -~~~~~~~~~~dvvi~~~g~---~~~~~~~l~~~G~~v~~g~~~  245 (310)
                       ....+...++|+|+||+|.   ...+.++|..+.+-|.+..+.
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence             1112223489999999994   467788888888888887654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.69  E-value=0.21  Score=37.76  Aligned_cols=33  Identities=18%  Similarity=0.282  Sum_probs=25.7

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSS  185 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~  185 (310)
                      ++|||+|++|-+|...+..+... +.  +|++..++
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~-~~~~~v~~~~r~   37 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSE-PTLAKVIAPARK   37 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHC-TTCCEEECCBSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEEEeCC
Confidence            68999999999999999877664 64  55555554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.68  E-value=1.2  Score=31.42  Aligned_cols=69  Identities=22%  Similarity=0.221  Sum_probs=40.1

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHHHHHcC-CCEEe----eCCCCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDLLRSLG-ADLAI----DYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~~~~~g-~~~~~----~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|.|.|++|.+|...+.++... +.  +++.++.++.+.+. .++. .....    .....+..+..+++|+|+-+.|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~-~~~~elvLiDi~~~~~~a-~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAHTPGVA-ADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSSHHHHH-HHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhC-CccceEEEEeccccchhh-HHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCC
Confidence            6899997799999988887764 53  46666666554433 3332 11110    0111122223467888887766

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.52  E-value=1.7  Score=31.63  Aligned_cols=91  Identities=20%  Similarity=0.261  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhh-HHHHHHcCCCEEeeC-CCCc--------ccccCCCccEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAK-LDLLRSLGADLAIDY-TKEN--------IEDLPEKFDVV  218 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~-~~~~~~~g~~~~~~~-~~~~--------~~~~~~~~dvv  218 (310)
                      -.|.+|+|.|.+..+|.=...++... |+.|+.+..+... ..    .+.+..+.. ...+        ..+....+|++
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~-gaTVt~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIv  101 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNNIQKFT----RGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVV  101 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSEEEEEE----SCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHC-CCEEEEeccccccccc----cccceeeeeeccccccccchhHHhhccccCCEE
Confidence            46899999998888998766666664 9988877653211 10    011111100 0001        11112258999


Q ss_pred             EeCCCChH--HHHhhcccCCEEEEEeCC
Q 021628          219 FDAVGQCD--KALKAVKEGGRVVSIIGS  244 (310)
Q Consensus       219 i~~~g~~~--~~~~~l~~~G~~v~~g~~  244 (310)
                      +.++|..+  ---+++++|..++.+|..
T Consensus       102 IsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         102 ITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             EECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             EEccCCCccccChhhcccCceEeecccc
Confidence            99998643  234678888888888754

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.49  E-value=1.2  Score=35.13  Aligned_cols=91  Identities=20%  Similarity=0.193  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHHcC-CC---------------EEeeCCCCcccccC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRSLG-AD---------------LAIDYTKENIEDLP  212 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~~g-~~---------------~~~~~~~~~~~~~~  212 (310)
                      ....+|||+|  ++.|..+-.+++. ...++.++..+++=.+.++++- ..               .++..+...+....
T Consensus        71 ~~p~~vLiiG--~G~G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~  147 (276)
T d1mjfa_          71 PKPKRVLVIG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN  147 (276)
T ss_dssp             SCCCEEEEEE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred             CCCceEEEec--CCchHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhcc
Confidence            4557999998  4445555666665 3557888888888777776532 10               12221111111224


Q ss_pred             CCccEEE-eCCC------C------hHHHHhhcccCCEEEEEe
Q 021628          213 EKFDVVF-DAVG------Q------CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       213 ~~~dvvi-~~~g------~------~~~~~~~l~~~G~~v~~g  242 (310)
                      +.+|+|| |+..      .      .+.+.++|+++|.++..+
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            5799886 4432      1      267788999999998765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.46  E-value=1.8  Score=35.03  Aligned_cols=32  Identities=34%  Similarity=0.431  Sum_probs=27.0

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      +.|||+|++|-+|...+..+... |.+|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~-g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN-GYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC-cCeEEEEEC
Confidence            57899999999999888877764 899998864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.44  E-value=0.63  Score=35.71  Aligned_cols=34  Identities=24%  Similarity=0.314  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      .-.+|+|.| +|..|++++..++.. |.+|.++++.
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~-G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARK-GYSVHILARD   38 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHC-CCCEEEEeCC
Confidence            445799999 999999988877774 9999999874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.38  E-value=0.45  Score=37.66  Aligned_cols=33  Identities=27%  Similarity=0.450  Sum_probs=28.4

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      .|+|.| +|+.|++++..++.. |.+|++++++++
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~-G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKA-GIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHH-TCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence            589999 999999988888885 999999988653

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=84.13  E-value=1.8  Score=35.21  Aligned_cols=95  Identities=13%  Similarity=0.189  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecChhhHHHH-HHcCC--CEEeeCCCCcccccCCCccEEEeCCCC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSSTAKLDLL-RSLGA--DLAIDYTKENIEDLPEKFDVVFDAVGQ  224 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~~~~~~~-~~~g~--~~~~~~~~~~~~~~~~~~dvvi~~~g~  224 (310)
                      +...++.|+| +|.-+...++.....++. +|.+..+++++.+.+ +++..  ..-+.. ..+..+..+++|+|+-|+.+
T Consensus       126 ~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~-~~s~~eav~~ADIi~t~Tas  203 (340)
T d1x7da_         126 PNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR-ASSVAEAVKGVDIITTVTAD  203 (340)
T ss_dssp             TTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE-CSSHHHHHTTCSEEEECCCC
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee-cCCHHHHHhcCCceeecccc
Confidence            4567899999 999999888766555575 667888887765544 44421  111111 12234445689999987642


Q ss_pred             ----hHHHHhhcccCCEEEEEeCCC
Q 021628          225 ----CDKALKAVKEGGRVVSIIGSV  245 (310)
Q Consensus       225 ----~~~~~~~l~~~G~~v~~g~~~  245 (310)
                          +----++++|+-.+..+|.+.
T Consensus       204 ~s~~Pv~~~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         204 KAYATIITPDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             SSEEEEECGGGCCTTCEEEECSCCB
T ss_pred             CCCCcccchhhcCCCCEEeecccch
Confidence                112235788888888887653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.12  E-value=2.4  Score=34.62  Aligned_cols=56  Identities=25%  Similarity=0.389  Sum_probs=44.0

Q ss_pred             HhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEe
Q 021628          144 ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAI  201 (310)
Q Consensus       144 ~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~  201 (310)
                      +...+++++.|+... +|..|.+.+..|+.+ |.+.+++..   ++++.+.++.+|++.+.
T Consensus        90 ~~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~-Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~  148 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPT-SGNTGIGLALAAAVR-GYRCIIVMPEKMSSEKVDVLRALGAEIVR  148 (355)
T ss_dssp             HHTCSCTTCEEEEEC-SSHHHHHHHHHHHHH-TCEEEEEECSCCCHHHHHHHHHTTCEEEE
T ss_pred             HcCCcccCceEEEec-ccchhhHHHHHHHhc-cCCeEEEeeccchHHHHHHHHhcCCeEEE
Confidence            455667777766655 899999999999996 998877753   67788889999987554

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.85  E-value=0.76  Score=33.39  Aligned_cols=80  Identities=16%  Similarity=0.211  Sum_probs=51.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec-ChhhHHHHHHcCCCEEeeCCCCcccccCCCccEEEeCCCC---hHHH
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS-STAKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQ---CDKA  228 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~dvvi~~~g~---~~~~  228 (310)
                      +|.|+| .|.+|...+...+...+.+++.+.. ++++..      ........  +.......+|+|+.|+++   .+.+
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~------~~~~~~~~--~~~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT------KTPVFDVA--DVDKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS------SSCEEEGG--GGGGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc------ccccccch--hhhhhccccceEEEeCCCcccHHHH
Confidence            578999 8999998888777644567775544 543321      11122221  223334579999999874   4778


Q ss_pred             HhhcccCCEEEEE
Q 021628          229 LKAVKEGGRVVSI  241 (310)
Q Consensus       229 ~~~l~~~G~~v~~  241 (310)
                      .++|..|-.++..
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            8888887776643

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=83.83  E-value=0.83  Score=31.39  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      +..++++|.| +|.+|+=.++..+.+ |.+|.++.+.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~-G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTL-GSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcC-CCEEEEEEeec
Confidence            4458999999 999999888888886 99999997654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=83.79  E-value=0.59  Score=37.80  Aligned_cols=35  Identities=23%  Similarity=0.290  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ..+|+|+| +|..|+.++..+... |.+|.++..++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~-G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEK-GHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhC-CCCEEEEECCCC
Confidence            57899999 999999998888874 899999987643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.63  E-value=0.87  Score=31.60  Aligned_cols=38  Identities=18%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             cCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          148 FSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       148 ~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      ++.+.+|+|.| +|.+|+=++..++.+ |.+|.++.+.+.
T Consensus        32 ~~~~k~v~VIG-gG~iG~E~A~~l~~~-g~~Vtvie~~~~   69 (133)
T d1q1ra2          32 LIADNRLVVIG-GGYIGLEVAATAIKA-NMHVTLLDTAAR   69 (133)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred             hccCCEEEEEC-CchHHHHHHHHHHhh-Ccceeeeeeccc
Confidence            45678999999 999999888888885 999999986443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.50  E-value=1.8  Score=30.51  Aligned_cols=69  Identities=22%  Similarity=0.275  Sum_probs=37.7

Q ss_pred             EEEEEcCCcchHHHHHHHH-Hhh-cCCcEEEEecChhhHHHHHHcC-C-----CEEeeCCCCcccccCCCccEEEeCCC
Q 021628          153 SILVLGGAGGVGTMVIQLA-KHV-FGASKVAATSSTAKLDLLRSLG-A-----DLAIDYTKENIEDLPEKFDVVFDAVG  223 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la-~~~-~g~~vi~~~~~~~~~~~~~~~g-~-----~~~~~~~~~~~~~~~~~~dvvi~~~g  223 (310)
                      +|.|+|++|.+|...+.++ ... ...++..++..+.....+.++. .     ...+. ...+. +..++.|+|+-+.|
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~-~~~~~-~~~~~aDvvvitaG   78 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS-GEDAT-PALEGADVVLISAG   78 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEEC-SSCCH-HHHTTCSEEEECCS
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEE-cCCCc-cccCCCCEEEECCC
Confidence            5789998899998766543 332 1346666766544333333321 1     11111 11122 22357889988877

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=83.35  E-value=1.6  Score=35.29  Aligned_cols=91  Identities=24%  Similarity=0.227  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH----cCCCE--EeeCCCCcc----cccCCCccEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS----LGADL--AIDYTKENI----EDLPEKFDVV  218 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~----~~~~~~~dvv  218 (310)
                      .+|++||=++ +|+ |..++.+|+.  +.+|+.++.+++.++.+++    .|.+.  ++..+..++    ....+.||+|
T Consensus       144 ~~g~rVLDl~-~gt-G~~s~~~a~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         144 FRGERALDVF-SYA-GGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             CCEEEEEEET-CTT-THHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             hCCCeeeccC-CCC-cHHHHHHHhc--CCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            4688988776 333 4455666653  6789999999999888853    44432  232222121    1224579998


Q ss_pred             EeCC---C----C-----------hHHHHhhcccCCEEEEEeC
Q 021628          219 FDAV---G----Q-----------CDKALKAVKEGGRVVSIIG  243 (310)
Q Consensus       219 i~~~---g----~-----------~~~~~~~l~~~G~~v~~g~  243 (310)
                      +--.   +    .           ...+++.|+|||.++....
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            7422   1    1           1467788999999987754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.22  E-value=0.88  Score=31.15  Aligned_cols=34  Identities=12%  Similarity=0.215  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      .++++|.| +|.+|+=.+..++.+ |.+|+++.+++
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~-G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSAL-GSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcC-CcEEEEEeecc
Confidence            47899999 899999988888886 99999998754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=83.21  E-value=1.2  Score=31.74  Aligned_cols=73  Identities=16%  Similarity=0.138  Sum_probs=42.5

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcC-CcEEEEecChhhHHHH-HHc-------CCCEEeeCCCCcccccCCCccEEE
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFG-ASKVAATSSTAKLDLL-RSL-------GADLAIDYTKENIEDLPEKFDVVF  219 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g-~~vi~~~~~~~~~~~~-~~~-------g~~~~~~~~~~~~~~~~~~~dvvi  219 (310)
                      ++-.+|.|.| +|.+|...+.++... + .++++++.++++.+-. .++       +....... ..+..+..++.|+|+
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~-~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~~~~~~~~~~adiVv   81 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALR-ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEAALTGADCVI   81 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHHHHTTCSEEE
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhC-CCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-cCchhhhhcCCCeEE
Confidence            4567899999 699998877766664 5 4777777777653322 221       11111111 111122235788999


Q ss_pred             eCCCC
Q 021628          220 DAVGQ  224 (310)
Q Consensus       220 ~~~g~  224 (310)
                      -++|.
T Consensus        82 itag~   86 (154)
T d1pzga1          82 VTAGL   86 (154)
T ss_dssp             ECCSC
T ss_pred             Eeccc
Confidence            88763

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.18  E-value=0.96  Score=33.19  Aligned_cols=70  Identities=19%  Similarity=0.158  Sum_probs=40.6

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh--hHHHHHHcCCCEEe----eC----CCCcccccCCCccEEEeCC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA--KLDLLRSLGADLAI----DY----TKENIEDLPEKFDVVFDAV  222 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~--~~~~~~~~g~~~~~----~~----~~~~~~~~~~~~dvvi~~~  222 (310)
                      +|.|+| +|..|.+.+..+.. .|.+|.+..+..+  ..+.+++-.....+    ..    -..+..+....+|+|+.++
T Consensus         2 kI~ViG-aG~~GtalA~~la~-~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           2 IVSILG-AGAMGSALSVPLVD-NGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             EEEEES-CCHHHHHHHHHHHH-HCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHH-CCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            578999 99999986666655 3888998887433  33444322110000    00    0111222345789999998


Q ss_pred             CC
Q 021628          223 GQ  224 (310)
Q Consensus       223 g~  224 (310)
                      ++
T Consensus        80 ps   81 (180)
T d1txga2          80 ST   81 (180)
T ss_dssp             CG
T ss_pred             ch
Confidence            73

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.05  E-value=0.58  Score=38.91  Aligned_cols=32  Identities=19%  Similarity=0.273  Sum_probs=27.4

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFGASKVAAT  183 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~  183 (310)
                      |.+|||+|++|-+|...+..+... |.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~-g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKK-NYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC-cCEEEEEe
Confidence            678999999999999988877774 99999886

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.98  E-value=0.68  Score=37.04  Aligned_cols=35  Identities=11%  Similarity=0.254  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      ++..+|+|+| +|..|+.|+..++.. |.+|+++..+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~-G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSF-GMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhC-CCCEEEEeCC
Confidence            4556799999 999999988888875 9999988765

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.96  E-value=0.55  Score=36.45  Aligned_cols=33  Identities=18%  Similarity=0.334  Sum_probs=27.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      -|+|.| +|+.|++|+..+... |.+|.+++++++
T Consensus         6 DViIIG-aG~aGl~aA~~la~~-G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIG-AGAAGLFCAAQLAKL-GKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHC-CCcEEEEecCCC
Confidence            378899 999999988777774 999999998654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.84  E-value=0.74  Score=36.75  Aligned_cols=34  Identities=29%  Similarity=0.366  Sum_probs=30.2

Q ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          149 SAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       149 ~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      -.|.+|+|.| .|.+|..+++++... |++|+.+..
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~-Gakvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRF-GAKCVAVGE   67 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHC-CCEEEEEEc
Confidence            3678999999 999999999999996 999998864

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=82.57  E-value=3.2  Score=31.57  Aligned_cols=96  Identities=17%  Similarity=0.159  Sum_probs=63.0

Q ss_pred             hcccCCCCEEEEEcCCcchHHHHHHHHHhhc-CCcEEEEecChhhHHHHH----HcCCCE---EeeCCCCc-ccc-----
Q 021628          145 RSAFSAGKSILVLGGAGGVGTMVIQLAKHVF-GASKVAATSSTAKLDLLR----SLGADL---AIDYTKEN-IED-----  210 (310)
Q Consensus       145 ~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~-g~~vi~~~~~~~~~~~~~----~~g~~~---~~~~~~~~-~~~-----  210 (310)
                      ..+.....+||-+|  ...|..++.+|+.+. +.+++.++.+++..+.++    +.|...   +...+..+ +..     
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~  131 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCG
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhcc
Confidence            34445668999998  678999999988752 468888888988776664    345432   12222111 111     


Q ss_pred             -cCCCccEEE-eCCC-C----hHHHHhhcccCCEEEEEe
Q 021628          211 -LPEKFDVVF-DAVG-Q----CDKALKAVKEGGRVVSII  242 (310)
Q Consensus       211 -~~~~~dvvi-~~~g-~----~~~~~~~l~~~G~~v~~g  242 (310)
                       ..+.+|.|| |+-- .    .+.+++.|++||.++.=.
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence             134699886 5543 2    478899999999998654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.57  E-value=0.59  Score=35.45  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=26.3

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      |+|+| +|..|+.|+..+... |.+|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~-G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVD-GKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCCEEEEcCCC
Confidence            78899 999999988777764 99999998864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=82.45  E-value=4  Score=28.57  Aligned_cols=68  Identities=15%  Similarity=0.139  Sum_probs=41.8

Q ss_pred             CCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecChhhHHH-HHHc-------CCCEEeeCCCCcccccCCCccEEEe
Q 021628          151 GKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSSTAKLDL-LRSL-------GADLAIDYTKENIEDLPEKFDVVFD  220 (310)
Q Consensus       151 g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~~~~~~-~~~~-------g~~~~~~~~~~~~~~~~~~~dvvi~  220 (310)
                      ..+|.|.| +|.+|...+..+... +  .+++.++.++++.+- +.++       +...+...   ++. ..+++|+|+-
T Consensus         5 ~~KI~IIG-aG~VG~~~A~~l~~~-~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~---d~~-~~~~adivvi   78 (146)
T d1ez4a1           5 HQKVVLVG-DGAVGSSYAFAMAQQ-GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG---EYS-DCKDADLVVI   78 (146)
T ss_dssp             BCEEEEEC-CSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEEC---CGG-GGTTCSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhc-CCCcEEEEeecccchhHHHHHHHhccccccCCceEeec---cHH-HhccccEEEE
Confidence            45899999 799998877766654 5  468888888765431 1111       12222221   222 2368899998


Q ss_pred             CCCC
Q 021628          221 AVGQ  224 (310)
Q Consensus       221 ~~g~  224 (310)
                      ++|.
T Consensus        79 tag~   82 (146)
T d1ez4a1          79 TAGA   82 (146)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            8774

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.28  E-value=0.61  Score=35.88  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=26.3

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecChh
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTA  187 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~  187 (310)
                      |+|.| +|..|++++..+... |.+|+++++++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~-G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEE-GANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence            78899 999999877766664 999999987643

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.07  E-value=1.3  Score=34.59  Aligned_cols=46  Identities=11%  Similarity=0.078  Sum_probs=33.1

Q ss_pred             cccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecChhhHHHHHH
Q 021628          146 SAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATSSTAKLDLLRS  194 (310)
Q Consensus       146 ~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~~~~~~~~~  194 (310)
                      .+...|.++|=+| +|+ |...+..+.. ...+|+.++-++..++.+++
T Consensus        50 ~g~~~g~~vLDiG-cG~-g~~~~~~~~~-~~~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIG-SGP-TVYQLLSACS-HFEDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEET-CTT-CCGGGTTGGG-GCSEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEec-cCC-CHHHHHHhcc-cCCeEEEEeCCHHHHHHHHH
Confidence            4556789999999 655 4444444444 36689999999998888864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.96  E-value=0.71  Score=35.91  Aligned_cols=32  Identities=28%  Similarity=0.281  Sum_probs=26.5

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecCh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST  186 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~  186 (310)
                      .|+|.| +|..|++++.+++.. |. +|.++.+++
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~-Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQA-GIGKVTLLESSS   35 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHT-TCSEEEEEESSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhC-CCCeEEEEeCCC
Confidence            589999 999999999988885 86 777877654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.90  E-value=0.73  Score=34.65  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.7

Q ss_pred             EEEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          154 ILVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       154 vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      |+|+| +|+.|+.++..+..+ |.+|++++..+
T Consensus         6 vvVIG-gGpaGl~aA~~aa~~-G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIG-GGPGGYVAAIKAAQL-GFKTTCIEKRG   36 (221)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHH-TCCEEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHHC-CCcEEEEEecC
Confidence            78889 899999999988885 99999998653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.52  E-value=0.77  Score=37.06  Aligned_cols=33  Identities=18%  Similarity=0.178  Sum_probs=29.2

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      +++||+|++|-+|...+..+... |.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~-g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGK-GYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHC-cCEEEEEECC
Confidence            57999999999999988888874 9999999974

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=81.19  E-value=0.64  Score=35.61  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=26.3

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCC-cEEEEecCh
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGA-SKVAATSST  186 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~-~vi~~~~~~  186 (310)
                      .|+|.| +|..|+.|+..++.. |. +|+++.+++
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~-G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEA-GITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhC-CCCcEEEEECCC
Confidence            489999 999999988877775 86 688888753

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.96  E-value=3  Score=33.46  Aligned_cols=58  Identities=21%  Similarity=0.316  Sum_probs=45.0

Q ss_pred             HHhcccCCCCEEEEEcCCcchHHHHHHHHHhhcCCcEEEEec---ChhhHHHHHHcCCCEEe
Q 021628          143 LERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGASKVAATS---STAKLDLLRSLGADLAI  201 (310)
Q Consensus       143 l~~~~~~~g~~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~---~~~~~~~~~~~g~~~~~  201 (310)
                      .+...++++...+|..++|..|.+.+..++.+ |.+.++++.   ++.+.+.++.+|++.++
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~-g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAK-GYKLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHH-TCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhh-ccceEEeehhhhhhhhhhhhhccCcceEE
Confidence            34566667766677777999999999999996 988776653   67788888999987654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=80.83  E-value=1.1  Score=32.18  Aligned_cols=35  Identities=23%  Similarity=0.370  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCcchHHHHHHHHHhhcC--CcEEEEecCh
Q 021628          150 AGKSILVLGGAGGVGTMVIQLAKHVFG--ASKVAATSST  186 (310)
Q Consensus       150 ~g~~vlI~g~~g~~G~~a~~la~~~~g--~~vi~~~~~~  186 (310)
                      .|++|+|.| +|..|+.++..++.+ +  .+|+++..++
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~-~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLA-DPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHc-CCCCcEEEEECCC
Confidence            478999999 899999888877775 5  4677776554

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=80.59  E-value=0.63  Score=36.45  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=26.7

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEecC
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATSS  185 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~~  185 (310)
                      +|+|+| +|..|+.|+..++.. |.+|+++..+
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~-G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVG-GGISGLAVAHHLRSR-GTDAVLLESS   32 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHTT-TCCEEEECSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHhC-CCCEEEEecC
Confidence            489999 899999988888775 9999999875

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=80.52  E-value=0.79  Score=33.30  Aligned_cols=30  Identities=17%  Similarity=0.317  Sum_probs=26.0

Q ss_pred             EEEEEcCCcchHHHHHHHHHhhcCCcEEEEec
Q 021628          153 SILVLGGAGGVGTMVIQLAKHVFGASKVAATS  184 (310)
Q Consensus       153 ~vlI~g~~g~~G~~a~~la~~~~g~~vi~~~~  184 (310)
                      -|+|+| +|+.|+.|+..+... |.++.++.+
T Consensus         3 DViIIG-gGpaGl~AAi~aar~-G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVG-SGPAGAAAAIYSARK-GIRTGLMGE   32 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHc-CCeEEEEEE
Confidence            378999 999999999988885 999999875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.50  E-value=0.77  Score=37.24  Aligned_cols=33  Identities=15%  Similarity=0.253  Sum_probs=28.6

Q ss_pred             EE-EEEcCCcchHHHHHHHHHhhcCCcEEEEecCh
Q 021628          153 SI-LVLGGAGGVGTMVIQLAKHVFGASKVAATSST  186 (310)
Q Consensus       153 ~v-lI~g~~g~~G~~a~~la~~~~g~~vi~~~~~~  186 (310)
                      +| ||+|++|-+|...+..+... |.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~-g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEK-GYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC-cCEEEEEECCC
Confidence            57 99999999999988888775 99999999843

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=80.32  E-value=3  Score=29.17  Aligned_cols=67  Identities=19%  Similarity=0.269  Sum_probs=39.8

Q ss_pred             CEEEEEcCCcchHHHHHHHHHhhcCC--cEEEEecChhhHHH----HHH---cC-CCEEeeCCCCcccccCCCccEEEeC
Q 021628          152 KSILVLGGAGGVGTMVIQLAKHVFGA--SKVAATSSTAKLDL----LRS---LG-ADLAIDYTKENIEDLPEKFDVVFDA  221 (310)
Q Consensus       152 ~~vlI~g~~g~~G~~a~~la~~~~g~--~vi~~~~~~~~~~~----~~~---~g-~~~~~~~~~~~~~~~~~~~dvvi~~  221 (310)
                      .+|.|.| +|.+|..++..+... +.  +++.++.++++.+-    +++   +. ...+...  .++. ..++.|+|+-+
T Consensus         2 ~Ki~IIG-aG~VG~~~a~~l~~~-~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~-~~~daDvVVit   76 (143)
T d1llda1           2 TKLAVIG-AGAVGSTLAFAAAQR-GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE-ICRDADMVVIT   76 (143)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG-GGTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhc-CCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHH-HhhCCcEEEEe
Confidence            4688999 699999887766653 43  67777777765421    111   11 1122211  1222 24578999988


Q ss_pred             CC
Q 021628          222 VG  223 (310)
Q Consensus       222 ~g  223 (310)
                      +|
T Consensus        77 aG   78 (143)
T d1llda1          77 AG   78 (143)
T ss_dssp             CC
T ss_pred             cc
Confidence            87