Citrus Sinensis ID: 021635

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHcccccccccccccccccccccccHHHHHccccccccccccccccccHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEEcccccccEEEccEEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHEccccccccHHccccccccHHccHHHHHHHHcccccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHccHHHHcHcccccccccccccccccccEEEEEcccccccccccccccccEcccccccccEEccccccEEEccccEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mtwcndcsdvqtierissppssstnnnnnnnnntsnssssakaknclvrscpscghqikcneqarihdlpglpagvkfdptDQELLEHLEAKVRADARklhplidefiptlegengicythpeklpgvskdglirhffhrpskayttgtrkrrkvhtdeqggetrwhktgktrpvfiggkvkgYKKILVLYTNygkqkkpektnWVMHQYhlggneeekdgeLVVSKVFyqtqprqcgnsvikdssslppkfninkgqsgldglknnpgvvdyynppfiafdqgggqnrasppqalipphfaahdtsfip
Flexible Loop (DISEMBL)
mtwcndcsdvqtierissppssstnnnnnnnNNTSNSSSSAKAKNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFhrpskayttgtrkrrkvhtdeqggetrwhktgktrpvfiggkvkgyKKILVLYTNygkqkkpektnWVMHQYHLGGNEEEKDGELVVSKVFYQtqprqcgnsvikdssslppKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPhfaahdtsfip
Low Complexity Region (SEG)
MTWCNDCSDVQTIERIssppssstnnnnnnnnntsnssssAKAKNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Disordered region (IsUnstruct)
*********************************************CLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRP************************WHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGN*****GELVVSKVFYQTQ*********************************NPGVVDYYNPPFIAFD****************************
Disordered Region (DISOPRED)
MTW****SDVQT*ERI********************************RSCPSCGHQ*************GLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVF*******************************************************************************I*
Disordered Region (DISEMBL)
********DVQTIERIS********NNNNNN************KNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKA***********************KTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Disordered Region (DISPRO)
*********VQTIERISSPPSS*************N****AKAKNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQ*************************************VD*Y*PP*********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPPHFAAHDTSFIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
Q6NQK2	449	NAC domain-containing pro	no	no	0.577	0.398	0.569	4e-56
Q9FLJ2	336	NAC domain-containing pro	no	no	0.493	0.455	0.338	6e-13
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.480	0.397	0.348	3e-12
Q39013	289	NAC domain-containing pro	no	no	0.422	0.453	0.335	6e-12
O81913	359	NAC domain-containing pro	no	no	0.390	0.337	0.335	4e-10
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.396	0.434	0.344	4e-10
Q84K00	567	NAC domain-containing pro	no	no	0.464	0.253	0.313	8e-10
Q9S851	334	Protein CUP-SHAPED COTYLE	no	no	0.467	0.434	0.316	1e-09
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.493	0.501	0.286	1e-09
A2YMR0	425	NAC transcription factor	N/A	no	0.409	0.298	0.333	2e-09

>sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1

 Score =  218 bits (556), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/188 (56%), Positives = 133/188 (70%), Gaps = 9/188 (4%)

Query: 49  RSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFI 108
           R CP C H I  ++   + D PGLP GVKFDP+D E++ HL AK        HP IDEFI
Sbjct: 37  RHCPKCQHVIDNSD--VVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFI 94

Query: 109 PTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHK 168
           PT+  ++GICYTHP+ LPGV  DG + HFFH+  KAY+TGTRKRRK+H D+  G+ RWHK
Sbjct: 95  PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH-DDDFGDVRWHK 153

Query: 169 TGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKV 228
           TG+T+PV + G  +G KKI+VLY       K  KTNWVMHQYHLG  E+EK+G+ VVSK+
Sbjct: 154 TGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKI 208

Query: 229 FYQTQPRQ 236
           FYQ QP+Q
Sbjct: 209 FYQ-QPQQ 215

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 82/183 (44%), Gaps = 30/183 (16%)

Query: 54  CGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEG 113
           CG Q K  EQ        LP G +F PTD+EL+ H   K   D          F     G
Sbjct: 5   CGFQ-KEEEQM------DLPPGFRFHPTDEELITHYLHKKVLDT--------SFSAKAIG 49

Query: 114 ENGICYTHPEKLPGVSKDGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKT 172
           E  +  + P +LP ++K G    +FF    + Y TG R  R     E G    W  TGK 
Sbjct: 50  EVDLNKSEPWELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRAT---EAG---YWKATGKD 103

Query: 173 RPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGN------EEEKDGELVVS 226
           + ++ G  + G KK LV Y   G+  K +KTNWVMH+Y L G        +    E V+ 
Sbjct: 104 KEIYRGKSLVGMKKTLVFYR--GRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVIC 161

Query: 227 KVF 229
           +VF
Sbjct: 162 RVF 164

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 81/178 (45%), Gaps = 29/178 (16%)

Query: 72  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDE-FIPTLEGENGICYTHPEKLPGVSK 130
           LP G +F PTD+EL+ H           L  ++D  F      E  +    P +LPG +K
Sbjct: 17  LPPGFRFHPTDEELITHY---------LLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAK 67

Query: 131 DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGG--KVKGYKKI 187
            G    +FF    + Y TG R  R     E G    W  TGK R +F      + G KK 
Sbjct: 68  MGEKEWYFFSLRDRKYPTGLRTNRAT---EAG---YWKATGKDREIFSSKTCALVGMKKT 121

Query: 188 LVLYTNYGKQKKPEKTNWVMHQYHLGG-------NEEEKDGELVVSKVFYQTQPRQCG 238
           LV Y   G+  K EK+NWVMH+Y L G       +   KD E V+S+VF +T     G
Sbjct: 122 LVFYK--GRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKD-EWVISRVFQKTTLASTG 176

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 72.0 bits (175), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 18/149 (12%)

Query: 66  IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKL 125
           + +L  LP G +F PTD+EL+ H   +  A      P+I E          +    P +L
Sbjct: 1   MSELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEI--------DLYKYDPWEL 52

Query: 126 PGVSKDGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGY 184
           PG++  G    +F  P  + Y  G+R  R        G   W  TG  +P+ +   V G 
Sbjct: 53  PGLALYGEKEWYFFSPRDRKYPNGSRPNR------SAGSGYWKATGADKPIGLPKPV-GI 105

Query: 185 KKILVLYTNYGKQKKPEKTNWVMHQYHLG 213
           KK LV Y   GK  K EKTNW+MH+Y L 
Sbjct: 106 KKALVFYA--GKAPKGEKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 25/146 (17%)

Query: 73  PAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS--- 129
           P G +F P D+E+++H       D+   H  +DE I T++    IC   P  LP  S   
Sbjct: 4   PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIK 57

Query: 130 -KDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI--GGKVK-GYK 185
            +DG + +FF      Y  G ++RR+ ++        W KTGKT  V    G + K G K
Sbjct: 58  SRDG-VWYFFSVKEMKYNRGDQQRRRTNSG------FWKKTGKTMTVMRKRGNREKIGEK 110

Query: 186 KILVLYTNYGKQKKPEKTNWVMHQYH 211
           ++LV      K +   KT+WVMH+YH
Sbjct: 111 RVLVF-----KNRDGSKTDWVMHEYH 131

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 65.5 bits (158), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 22/145 (15%)

Query: 72  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 131
           LPAG +F PTD+EL++    +  A  +   P+I         E  +   +P +LP +S  
Sbjct: 7   LPAGFRFHPTDEELVKFYLCRKCASEQISAPVI--------AEIDLYKFNPWELPEMSLY 58

Query: 132 GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK--GYKKIL 188
           G    +F  P  + Y  G+R  R        G   W  TG  +P+   GK K  G KK L
Sbjct: 59  GEKEWYFFSPRDRKYPNGSRPNR------AAGTGYWKATGADKPI---GKPKTLGIKKAL 109

Query: 189 VLYTNYGKQKKPEKTNWVMHQYHLG 213
           V Y   GK  K  KTNW+MH+Y L 
Sbjct: 110 VFYA--GKAPKGIKTNWIMHEYRLA 132

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 64.7 bits (156), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 25/169 (14%)

Query: 72  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
           L  G +F PTD+EL+ + L+ KV     K   +             I  + P  LP  SK
Sbjct: 9   LAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAI---------SVTDIYKSEPWDLPDKSK 59

Query: 131 ---DGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKI 187
                L  +FF    K Y+ G++  R     E+G    W  TGK R +  G +V G KK 
Sbjct: 60  LKSRDLEWYFFSMLDKKYSNGSKTNRAT---EKG---YWKTTGKDREIRNGSRVVGMKKT 113

Query: 188 LVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG----ELVVSKVFYQT 232
           LV +   G+  + E+TNWVMH+Y L   + +K G      V+ ++F ++
Sbjct: 114 LVYHK--GRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKS 160

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S851|NAC31_ARATH Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 32/177 (18%)

Query: 71  GLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEG----ENGICYTHPEKL 125
           GLP G +F PTD+EL+  +L +K+             F   L G    E  +    P +L
Sbjct: 21  GLPPGFRFHPTDEELITFYLASKI-------------FHGGLSGIHISEVDLNRCEPWEL 67

Query: 126 PGVSKDGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI--GGKVK 182
           P ++K G    +F+    + Y TG R  R            W  TGK + VF   GG++ 
Sbjct: 68  PEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAG------YWKATGKDKEVFSGGGGQLV 121

Query: 183 GYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG---ELVVSKVFYQTQPRQ 236
           G KK LV Y   G+  +  KT WVMH+Y L  +   +     E V+ +VF +T  R+
Sbjct: 122 GMKKTLVFYK--GRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRK 176

Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 25/178 (14%)

Query: 71  GLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS 129
           G+P G +F PTD+ELL  +L+ K+  +  ++  + +  +  +E         P  L    
Sbjct: 7   GVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIE---------PWDLQDRC 57

Query: 130 KDGLI----RHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYK 185
           K G       +FF    + Y TG+R  R  H+        W  TG+ + +    K  G +
Sbjct: 58  KIGSTPQNEWYFFSHKDRKYPTGSRTNRATHSG------FWKATGRDKCIRNSYKKIGMR 111

Query: 186 KILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEE--KDGELVVSKVFYQTQPRQCGNSV 241
           K LV Y   G+    +KT+W+MH+Y +   E++  +DG  VV +VF +    + GN V
Sbjct: 112 KTLVFYK--GRAPHGQKTDWIMHEYRIEDTEDDPCEDG-WVVCRVFKKKNLFKVGNDV 166

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 63/147 (42%), Gaps = 20/147 (13%)

Query: 70  PGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVS 129
           P LP G +F PTD+EL+ H   K  A      PL    I     E  +    P +LP  +
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASV----PLPVTII----AEVDLYKFDPWELPEKA 78

Query: 130 KDGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVK---GYK 185
             G    +F  P  + Y  G R  R   +        W  TG  +P+   G  +   G K
Sbjct: 79  NFGEQEWYFFSPRDRKYPNGARPNRAATSG------YWKATGTDKPIMASGSTREKVGVK 132

Query: 186 KILVLYTNYGKQKKPEKTNWVMHQYHL 212
           K LV Y   GK  K  KTNW+MH+Y L
Sbjct: 133 KALVFYR--GKPPKGVKTNWIMHEYRL 157

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
255553617	294	transcription factor, putative [Ricinus	0.935	0.986	0.767	1e-130
224133394	299	NAC domain protein, IPR003441 [Populus t	0.948	0.983	0.739	1e-130
224092948	298	NAC domain protein, IPR003441 [Populus t	0.948	0.986	0.729	1e-121
225446463	303	PREDICTED: NAC domain-containing protein	0.925	0.947	0.731	1e-118
147833459	796	hypothetical protein VITISV_029763 [Viti	0.929	0.361	0.685	1e-112
225443590	312	PREDICTED: NAC domain-containing protein	0.929	0.923	0.685	1e-112
356521416	326	PREDICTED: NAC domain-containing protein	0.980	0.932	0.649	1e-111
297740435	311	unnamed protein product [Vitis vinifera]	0.893	0.890	0.7	1e-111
356546209	329	PREDICTED: NAC domain-containing protein	0.980	0.924	0.628	1e-107
255536709	305	NAC domain-containing protein 21/22, put	0.890	0.904	0.661	1e-107

>gi|255553617|ref|XP_002517849.1| transcription factor, putative [Ricinus communis] gi|223542831|gb|EEF44367.1| transcription factor, putative [Ricinus communis]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/314 (76%), Positives = 261/314 (83%), Gaps = 24/314 (7%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKC 60
           MTWCNDCSDVQTIER S  PSS         NNTS    + + K  L+R CPSCGHQIKC
Sbjct: 1   MTWCNDCSDVQTIERSSPAPSS---------NNTS--VIAQRHKESLLRCCPSCGHQIKC 49

Query: 61  NEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYT 120
            +QARIHDLPGLPAGVKFDPTDQELLEHLE KV++DARKLHPLIDEFIPT+EGENGICYT
Sbjct: 50  PDQARIHDLPGLPAGVKFDPTDQELLEHLEGKVKSDARKLHPLIDEFIPTIEGENGICYT 109

Query: 121 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGK 180
           HPEKLPGVSKDGL+RHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPVF+GGK
Sbjct: 110 HPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVFVGGK 169

Query: 181 VKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNS 240
           VKGYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S
Sbjct: 170 VKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-S 228

Query: 241 VIKDSSSLPPKFNINKGQSGLDGLKN---NPGVVDYYNPPFIAFDQGGGQNRASPPQALI 297
           ++KD  S+P K    KGQS  +   N   N  +V+YY P FI+FDQ GGQ R +PPQ L 
Sbjct: 229 IMKD--SIPSKL---KGQSVHEVANNSLKNATLVEYYTPSFISFDQ-GGQTRPNPPQLL- 281

Query: 298 PPHFAAHD-TSFIP 310
            PHFA HD +SFIP
Sbjct: 282 -PHFAVHDGSSFIP 294

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133394|ref|XP_002328031.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222837440|gb|EEE75819.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  469 bits (1207), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/315 (73%), Positives = 260/315 (82%), Gaps = 21/315 (6%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKC 60
           MTWCNDC+DVQTIER S PP ++             S  + + K CL+RSCPSCGHQIKC
Sbjct: 1   MTWCNDCNDVQTIERSSPPPCNA-------------SVIAQRHKECLIRSCPSCGHQIKC 47

Query: 61  NEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYT 120
            +QARIHDLPGLPAGVKFDPTDQELLEHLE KV++D RK+HPLIDEFIPT++GENGICYT
Sbjct: 48  QDQARIHDLPGLPAGVKFDPTDQELLEHLEGKVKSDTRKVHPLIDEFIPTIDGENGICYT 107

Query: 121 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGK 180
           HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPV +GGK
Sbjct: 108 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVLVGGK 167

Query: 181 VKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNS 240
           VKGYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S
Sbjct: 168 VKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-S 226

Query: 241 VIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNP-PFIAFDQGGGQNRAS---PPQAL 296
           +IKDS S+P K  +         LKN+  +V+YY+P  FI+FDQ  GQNR++   PPQ L
Sbjct: 227 LIKDSVSVPSKLKVQSSGHEGSNLKNSTTLVEYYHPSSFISFDQ-SGQNRSTNPNPPQQL 285

Query: 297 IPPHFAAHD-TSFIP 310
           +  HFA HD +SFIP
Sbjct: 286 L-SHFAVHDGSSFIP 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092948|ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222852670|gb|EEE90217.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/314 (72%), Positives = 256/314 (81%), Gaps = 20/314 (6%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKC 60
           MTWCNDC+DVQTIER S PP ++             S  + + K CL+RSCPSCGHQ+KC
Sbjct: 1   MTWCNDCNDVQTIERSSPPPCNA-------------SVIAQRHKECLIRSCPSCGHQMKC 47

Query: 61  NEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYT 120
            +QARIHDLPGLPAGVKFDPTD ELLEHLE KV++D  K+HPLIDEFIPT++GENGICYT
Sbjct: 48  QDQARIHDLPGLPAGVKFDPTDLELLEHLEGKVKSDTCKVHPLIDEFIPTIDGENGICYT 107

Query: 121 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGK 180
           HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD +GGETRWHKTGKTRPV + GK
Sbjct: 108 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVVVVGK 167

Query: 181 VKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNS 240
           VKGYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG S
Sbjct: 168 VKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCG-S 226

Query: 241 VIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRAS---PPQALI 297
           +IKDS  +P K  +         LKN+  +V+YYNP FI+FDQ  GQNR++   PPQ L+
Sbjct: 227 LIKDSVPVPSKLKVQSSGHEGSNLKNSTTLVEYYNPSFISFDQ-SGQNRSTNPNPPQQLL 285

Query: 298 PPHFAAHD-TSFIP 310
            PHFA HD +S IP
Sbjct: 286 -PHFALHDGSSLIP 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446463|ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera] gi|302143344|emb|CBI21905.3| unnamed protein product [Vitis vinifera]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/309 (73%), Positives = 244/309 (78%), Gaps = 22/309 (7%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSA-KAKNCLVRSCPSCGHQIK 59
           MTWCNDC + + IE  SSPPS            T NS+  A K K+   R+CPSCGHQIK
Sbjct: 1   MTWCNDCDNSRMIEG-SSPPS------------TDNSTVIAEKPKDTATRTCPSCGHQIK 47

Query: 60  CNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICY 119
             EQARIHDLPGLPAGVKFDPTDQELLEHL+ KVR D  KLHPLIDEFIPTLEGENGICY
Sbjct: 48  LQEQARIHDLPGLPAGVKFDPTDQELLEHLDGKVRCDDHKLHPLIDEFIPTLEGENGICY 107

Query: 120 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGG 179
           THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKV TD  GGETRWHKTGKTRPVF+GG
Sbjct: 108 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVSTDSDGGETRWHKTGKTRPVFVGG 167

Query: 180 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 239
           KVKGYKKILVLYTNYGKQ+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQC +
Sbjct: 168 KVKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQC-S 226

Query: 240 SVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNP-PFIAFDQGGGQNRASPPQALIP 298
           S++KD  SLP K   +        L+NN  +V+YYNP  FI+FDQ G QNR S   A + 
Sbjct: 227 SIMKD--SLPSKLKDHHSGHESPNLRNN-ALVEYYNPNSFISFDQ-GSQNRLS--HARLI 280

Query: 299 PHFAAHDTS 307
           P+F  HD S
Sbjct: 281 PNFTVHDGS 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833459|emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/312 (68%), Positives = 239/312 (76%), Gaps = 24/312 (7%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCL-VRSCPSCGHQIK 59
           MTWCND  D + I+ IS+             +    S   AKA + L   +CPSCGHQI+
Sbjct: 485 MTWCNDSDDERAIQIIST-------------SCEDKSVIDAKADDILPTLTCPSCGHQIE 531

Query: 60  CNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICY 119
             +QA IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICY
Sbjct: 532 FQDQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICY 591

Query: 120 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGG 179
           THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG
Sbjct: 592 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGG 651

Query: 180 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 239
            VKG+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG 
Sbjct: 652 AVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGL 711

Query: 240 SVIKDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIP 298
           S IKDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP
Sbjct: 712 S-IKDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIP 763

Query: 299 PHFAAHD-TSFI 309
                 D +SFI
Sbjct: 764 NLVVQGDGSSFI 775

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443590|ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/312 (68%), Positives = 239/312 (76%), Gaps = 24/312 (7%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCL-VRSCPSCGHQIK 59
           MTWCND  D + I+ IS+             +    S   AKA + L   +CPSCGHQI+
Sbjct: 1   MTWCNDSDDERAIQIIST-------------SCEDKSVIDAKADDILPTLTCPSCGHQIE 47

Query: 60  CNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICY 119
             +QA IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICY
Sbjct: 48  FQDQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICY 107

Query: 120 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGG 179
           THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG
Sbjct: 108 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGG 167

Query: 180 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 239
            VKG+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG 
Sbjct: 168 AVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGL 227

Query: 240 SVIKDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIP 298
           S IKDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP
Sbjct: 228 S-IKDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIP 279

Query: 299 PHFAAHD-TSFI 309
                 D +SFI
Sbjct: 280 NLVVQGDGSSFI 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521416|ref|XP_003529352.1| PREDICTED: NAC domain-containing protein 8-like [Glycine max]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/317 (64%), Positives = 235/317 (74%), Gaps = 13/317 (4%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIKC 60
           MTWCND  + + I+++ +P  + T+ NN     T  +    KA      +CPSCG  I+ 
Sbjct: 1   MTWCNDSDEERGIDQLVAPTITPTSTNNT----TVLTDHRTKASEIRTLTCPSCGQNIEF 56

Query: 61  NEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYT 120
            +Q  I+DLPGLPAGVKFDP DQE+LEHLEAKV +D  KLHPLIDEFIPTLEGENGICYT
Sbjct: 57  QDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYT 116

Query: 121 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGK 180
           HPEKLPGV KDG IRHFFHRPSKAYTTGTRKRRKVHTDE+G ETRWHKTGKTRPVF+GG 
Sbjct: 117 HPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGA 176

Query: 181 VKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGNS 240
           VKG+KKILVLYTNYG+QKKPEKTNWVMHQYHLG +EEEKDGELVVSKVFYQTQPRQCGNS
Sbjct: 177 VKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTSEEEKDGELVVSKVFYQTQPRQCGNS 236

Query: 241 VIKDSSSLPPKFNINKGQSGLDG------LKNNPGVVDYYNPPFIAFDQGGGQ-NRASPP 293
           +IK       +   N+     D         N   ++DYYNP FI +DQ GG+ NR + P
Sbjct: 237 IIKQDLYDEERLMTNQSVHNDDDNNIIPRNNNASALMDYYNPSFINYDQLGGRSNRENSP 296

Query: 294 QALIPPHFAAHD-TSFI 309
           Q LIP      D +SFI
Sbjct: 297 Q-LIPNLVMQGDSSSFI 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740435|emb|CBI30617.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/300 (70%), Positives = 234/300 (78%), Gaps = 23/300 (7%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCL-VRSCPSCGHQIK 59
           MTWCND  D + I+ IS+             +    S   AKA + L   +CPSCGHQI+
Sbjct: 1   MTWCNDSDDERAIQIIST-------------SCEDKSVIDAKADDILPTLTCPSCGHQIE 47

Query: 60  CNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICY 119
             +QA IHDLPGLPAGVKFDPTDQE+LEHLEAKV +D  K HPLIDEFIPTLEGENGICY
Sbjct: 48  FQDQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICY 107

Query: 120 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGG 179
           THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHT+E GGETRWHKTGKTRPVF+GG
Sbjct: 108 THPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGG 167

Query: 180 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 239
            VKG+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQCG 
Sbjct: 168 AVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGL 227

Query: 240 SVIKDSSSLPPKFNINKGQSGLDG-LKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIP 298
           S IKDS       N +  +S  DG +  +  +V+YY+P FI++DQ    NR SPPQ LIP
Sbjct: 228 S-IKDSLD-----NKSNSRSAHDGPIIKSAALVEYYHPSFISYDQ-VSHNRESPPQ-LIP 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546209|ref|XP_003541523.1| PREDICTED: NAC domain-containing protein 8-like [Glycine max]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/320 (62%), Positives = 235/320 (73%), Gaps = 16/320 (5%)

Query: 1   MTWCNDCSDVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRS--CPSCGHQI 58
           MTWCND  + + I+++ +P  + T+ NN     T+  +     K   +R+  CPSCGH I
Sbjct: 1   MTWCNDSDEERGIDQLVAPAITPTSTNN-----TTVLTHDHHRKPTEIRTITCPSCGHNI 55

Query: 59  KCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGIC 118
           +  +Q  I+DLPGLPAGVKFDP DQE+LEHLEAKV +D  KLHPLIDEFIPTLEGENGIC
Sbjct: 56  EFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVFSDVPKLHPLIDEFIPTLEGENGIC 115

Query: 119 YTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIG 178
           YTHPEKLPGVSKDG IRHFFHRPSKAYTTGTRKRRKVHTD++G ETRWHKTGKTRPVF+G
Sbjct: 116 YTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDKEGSETRWHKTGKTRPVFVG 175

Query: 179 GKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCG 238
           G VKG+KKILVLYTNYG+Q+KPEKTNWVMHQYHLG +EEEKDGELVVSK+FYQTQPRQCG
Sbjct: 176 GAVKGFKKILVLYTNYGRQQKPEKTNWVMHQYHLGTSEEEKDGELVVSKIFYQTQPRQCG 235

Query: 239 -NSVIKDSSSLPPKFNINKGQSGLDG-------LKNNPGVVDYYNPPFIAFDQGGGQ-NR 289
            NS+IK       +   N+     D          N   ++DYYNP FI +DQ GG+ NR
Sbjct: 236 NNSIIKQDLYDEERLMSNQISVHNDDDNNIIPRSNNASALMDYYNPSFINYDQLGGRSNR 295

Query: 290 ASPPQALIPPHFAAHDTSFI 309
            S  Q +         +SFI
Sbjct: 296 ESSAQLIPNLAMQGDSSSFI 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536709|ref|XP_002509421.1| NAC domain-containing protein 21/22, putative [Ricinus communis] gi|223549320|gb|EEF50808.1| NAC domain-containing protein 21/22, putative [Ricinus communis]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 199/301 (66%), Positives = 222/301 (73%), Gaps = 25/301 (8%)

Query: 1   MTWCNDCS-DVQTIERISSPPSSSTNNNNNNNNNTSNSSSSAKAKNCLVRSCPSCGHQIK 59
           MTWCN+ S D + I+ +++  +    N          +    K    L+ +CPSCGH I+
Sbjct: 1   MTWCNNNSVDERAIQLVTAGAAIPKENT---------TFVDKKPNEILIITCPSCGHNIE 51

Query: 60  CNEQAR--IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGI 117
             +QA   I DLPGLPAGVKFDPTDQE+LEHLEAKV +D RKLHPLIDEFIPTLEGENGI
Sbjct: 52  LQDQAAAGIQDLPGLPAGVKFDPTDQEILEHLEAKVLSDTRKLHPLIDEFIPTLEGENGI 111

Query: 118 CYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI 177
           CYTHPEKLPGVS DG IRHFFHRPSKAYTTGTRKRRKVHTDE G ETRWHKTGKTRPV  
Sbjct: 112 CYTHPEKLPGVSNDGQIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVVS 171

Query: 178 GGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQC 237
           GG VKG+KKILVLYTNYG+QKKPEKTNWVMHQYHLG NEEEKDGELVVSKVFYQTQPRQC
Sbjct: 172 GGMVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQC 231

Query: 238 GNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALI 297
           G S+             N+     + +  +P  VDYYNP FI++D     NR SPPQ LI
Sbjct: 232 GTSM------------TNRSSDDNNPIATHPSFVDYYNPAFISYDHHESHNRESPPQ-LI 278

Query: 298 P 298
           P
Sbjct: 279 P 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2121387	305	NAC073 "NAC domain containing	0.735	0.747	0.747	3.2e-100
TAIR|locus:2032580	314	NAC010 "NAC domain containing	0.838	0.828	0.605	1.2e-83
TAIR|locus:2118264	498	NAC075 "NAC domain containing	0.635	0.395	0.725	1.4e-78
TAIR|locus:2165031	386	NAC099 "NAC domain containing	0.609	0.489	0.679	6.7e-72
TAIR|locus:2031170	449	SOG1 "SUPPRESSOR OF GAMMA RADI	0.577	0.398	0.574	4.8e-55
TAIR|locus:2145743	350	NAC085 "NAC domain containing	0.645	0.571	0.495	4.8e-46
TAIR|locus:2084148	370	NAC044 "NAC domain containing	0.738	0.618	0.435	2.4e-44
TAIR|locus:2172334	335	ANAC087 "Arabidopsis NAC domai	0.706	0.653	0.291	1.2e-14
TAIR|locus:2095958	338	NAC046 "NAC domain containing	0.690	0.633	0.318	2e-14
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.548	0.596	0.348	1.2e-12

TAIR|locus:2121387 NAC073 "NAC domain containing protein 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
 Identities = 181/242 (74%), Positives = 196/242 (80%)

Query:     1 MTWCNDCSDVQTIERIXXXXXXXXXXXXXXXXXXXXXXXXAKAKNCLVRSCPSCGHQIKC 60
             MTWCND SDVQT+ERI                            +C  ++CPSCGH  K 
Sbjct:     1 MTWCNDRSDVQTVERIIPSPGAAESPVASLPV------------SCH-KTCPSCGHNFKF 47

Query:    61 NEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYT 120
             +EQA IHDLPGLPAGVKFDPTDQE+LEHLE KVR DA+KLHPLIDEFI T++GENGICYT
Sbjct:    48 HEQAGIHDLPGLPAGVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYT 107

Query:   121 HPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQ-GGETRWHKTGKTRPVFIGG 179
             HPEKLPGV+KDG +RHFFHRPSKAYTTGTRKRRKVHTD   GGETRWHKTGKTRPV  GG
Sbjct:   108 HPEKLPGVNKDGTVRHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLAGG 167

Query:   180 KVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPRQCGN 239
             +V+GYKKILVLYTNYGKQKKPEKTNWVMHQYHLG +EEEK+GELVVSKVFYQTQPRQCG 
Sbjct:   168 RVRGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGG 227

Query:   240 SV 241
             SV
Sbjct:   228 SV 229

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2032580 NAC010 "NAC domain containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 161/266 (60%), Positives = 190/266 (71%)

Query:     1 MTWCNDCSDVQ--TIERIXXXXXXXXXXXXXXXXXXXXXXXXAKAKNCLVRSCPSCGHQI 58
             M+WC+   D     +ER+                          +    + +CPSCGH++
Sbjct:     1 MSWCDGSDDNYDLNLERVSNTDHPSVQLKDQSQSCVTSRPDSKISAETPITTCPSCGHKL 60

Query:    59 KCNEQAR---IHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGEN 115
               ++  +   I DLP LPAGVKFDP+D+E+L HLEAKV +D RKLHPLIDEFIPTLEGEN
Sbjct:    61 HHHQDDQVGSIKDLPSLPAGVKFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGEN 120

Query:   116 GICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPV 175
             GICYTHPEKLPGVSKDG +RHFFHRPSKAYTTGTRKRRKV TDE+G ETRWHKTGKTRPV
Sbjct:   121 GICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPV 180

Query:   176 FIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVFYQTQPR 235
                    G+KKILVLYTNYG+QKKPEKTNWVMHQYHLG +E+EKDGE V+SKVFYQTQPR
Sbjct:   181 LSQSGETGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQPR 240

Query:   236 QCGNSVIKDSSSLP-PKFNINKGQSG 260
             QCG+   K  + +   +F+    Q+G
Sbjct:   241 QCGSMEPKPKNLVNLNRFSYENIQAG 266

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2118264 NAC075 "NAC domain containing protein 75" [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 153/211 (72%), Positives = 171/211 (81%)

Query:    46 CLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLID 105
             C  + CPSCGH+++   Q    D  GLPAGVKFDPTDQEL+EHLEAKV A   K HPLID
Sbjct:    26 CGSKKCPSCGHKLEGKPQ----DWVGLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLID 81

Query:   106 EFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTD----EQG 161
             EFIPT+EGE+GICYTHPEKLPGV++DGL RHFFHRPSKAYTTGTRKRRK+ T+     QG
Sbjct:    82 EFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQG 141

Query:   162 ----GETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEE 217
                 GETRWHKTGKTRPV + GK KG KKILVLYTN+GK +KPEKTNWVMHQYHLG +EE
Sbjct:   142 SSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEE 201

Query:   218 EKDGELVVSKVFYQTQPRQCGNSVIKDSSSL 248
             EK+GELVVSK+FYQTQPRQC  S    +SSL
Sbjct:   202 EKEGELVVSKIFYQTQPRQCNWS--SSTSSL 230

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2165031 NAC099 "NAC domain containing protein 99" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 138/203 (67%), Positives = 163/203 (80%)

Query:    46 CLVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRA--DARKL--- 100
             C  + CP CG  I+    A   +  GLPAGVKFDPTDQEL+EHLEAKV+   + +K    
Sbjct:    20 CGSKHCPGCGRMIQA---ATKPNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSS 76

Query:   101 HPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKV----H 156
             HPLIDEFIPT++GE+GICYTHP+KLPGV++DGL +HFFH+PS+AYTTGTRKRRK+    H
Sbjct:    77 HPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDH 136

Query:   157 TDEQGG--ETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGG 214
               E  G  ETRWHKTGKTRPV I G+ +G KKILVLYTN+GK ++PEKTNWVMHQYHLG 
Sbjct:   137 DSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGI 196

Query:   215 NEEEKDGELVVSKVFYQTQPRQC 237
             NEEE++GELVVSK+FYQTQPRQC
Sbjct:   197 NEEEREGELVVSKIFYQTQPRQC 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2031170 SOG1 "SUPPRESSOR OF GAMMA RADIATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 108/188 (57%), Positives = 132/188 (70%)

Query:    49 RSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFI 108
             R CP C H I  N    + D PGLP GVKFDP+D E++ HL AK        HP IDEFI
Sbjct:    37 RHCPKCQHVID-NSDV-VDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFI 94

Query:   109 PTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHK 168
             PT+  ++GICYTHP+ LPGV  DG + HFFH+  KAY+TGTRKRRK+H D+  G+ RWHK
Sbjct:    95 PTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIH-DDDFGDVRWHK 153

Query:   169 TGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKV 228
             TG+T+PV + G  +G KKI+VLY       K  KTNWVMHQYHLG  E+EK+G+ VVSK+
Sbjct:   154 TGRTKPVVLDGVQRGCKKIMVLYGG-----KAVKTNWVMHQYHLGIEEDEKEGDYVVSKI 208

Query:   229 FYQTQPRQ 236
             FYQ QP+Q
Sbjct:   209 FYQ-QPQQ 215

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000077 "DNA damage checkpoint" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

TAIR|locus:2145743 NAC085 "NAC domain containing protein 85" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 102/206 (49%), Positives = 136/206 (66%)

Query:    44 KNC-LVRSCPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHP 102
             K+C    +C +C ++I  N    +   PGLP GVKF+PTD+E++EHLEAK   D  K H 
Sbjct:    31 KDCGAYINCFNCSYRID-NSNV-LTPWPGLPKGVKFEPTDEEVIEHLEAKCGIDGLKPHL 88

Query:   103 LIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGG 162
             LI +FI ++  + GI YTHP+ LPGVSKDG    FF++ + AY  G RKRR++       
Sbjct:    89 LIQDFICSVTQDVGINYTHPQNLPGVSKDGTSVFFFNKTAHAYQNGQRKRRRITPTSLKD 148

Query:   163 ET-RWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG 221
             +T RWHKTG+T+PV + G  KG KKI+VLY +  K  KPEK+NWV+HQYHLG  EE + G
Sbjct:   149 DTVRWHKTGQTKPVMLNGIQKGCKKIMVLYKSARKGFKPEKSNWVLHQYHLG-TEEGEIG 207

Query:   222 ELVVSKVFYQTQPRQCGNSVIKDSSS 247
             E VVSK+ YQ QP+Q   ++ +  SS
Sbjct:   208 EYVVSKITYQ-QPKQQEKTIDESESS 232

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2084148 NAC044 "NAC domain containing protein 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 105/241 (43%), Positives = 142/241 (58%)

Query:    51 CPSCGHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPT 110
             CP+C ++I  N    I   PGLP GVKF+PTD++++E LEAK      + H LI+EFI  
Sbjct:    36 CPNCTYRID-NSNVLI-PWPGLPKGVKFEPTDEDIIEFLEAKCGIGGSEPHVLIEEFIRP 93

Query:   111 LEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGE-TRWHKT 169
             +  + GI YTHP+ LPG +KDG+   FFH+  +AY TG RKRRK+       E  RWHKT
Sbjct:    94 VTEDVGINYTHPQNLPGANKDGVSVFFFHKTVQAYGTGQRKRRKITPTLVNDEPVRWHKT 153

Query:   170 GKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDGELVVSKVF 229
             G+T+PV + G  +G KKI+VLY +  K  KPEK+NWV+HQYHLG  E ++ G+ VVSK+ 
Sbjct:   154 GRTKPVMLSGVQRGCKKIMVLYKSARKGTKPEKSNWVLHQYHLG-TEGKEIGDYVVSKIT 212

Query:   230 YQTQ-----PRQCGNSVIKDSSSLPPKFNINKGQSGLDGLKNNPGVVD---YYNPPFIAF 281
             YQ Q     P +  +S         PK N     S +DG+  +    D    ++P F   
Sbjct:   213 YQQQKLGENPDEGESSSGVRGGPTTPKTNTPTPPSLVDGVAGDEEAFDDLKMFDPFFEEL 272

Query:   282 D 282
             D
Sbjct:   273 D 273

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2172334 ANAC087 "Arabidopsis NAC domain containing protein 87" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 75/257 (29%), Positives = 115/257 (44%)

Query:    68 DLPGLPAGVKFDPTDQELLE-HLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLP 126
             +L  LP G +F PTD+E++  +L+ KV         L   F     GE  +    P  LP
Sbjct:    17 ELVDLPPGFRFHPTDEEIITCYLKEKV---------LNSRFTAVAMGEADLNKCEPWDLP 67

Query:   127 GVSKDGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIG-GKVKGY 184
               +K G    +FF +  + Y TG R  R     E G    W  TGK + +F G G + G 
Sbjct:    68 KRAKMGEKEFYFFCQRDRKYPTGMRTNRAT---ESG---YWKATGKDKEIFKGKGCLVGM 121

Query:   185 KKILVLYTNYGKQKKPEKTNWVMHQYHLGGN-------EEEKDGELVVSKVFYQTQPRQC 237
             KK LV Y   G+  K EKTNWVMH+Y L G        +  +D E VV +VF++  P   
Sbjct:   122 KKTLVFYR--GRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARD-EWVVCRVFHKNNP--- 175

Query:   238 GNSVIKDSSSLPPK-FNINKGQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPP--- 293
              ++  +  + +P + F        +D L +   +    +P F++  +       +PP   
Sbjct:   176 -STTTQPMTRIPVEDFTRMDSLENIDHLLDFSSLPPLIDPSFMSQTEQPNFKPINPPTYD 234

Query:   294 --QALIPPHFAAHDTSF 308
                 + P HF ++ + F
Sbjct:   235 ISSPIQPHHFNSYQSIF 251

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2095958 NAC046 "NAC domain containing protein 46" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 80/251 (31%), Positives = 112/251 (44%)

Query:    72 LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
             LP G +F PTD+E++ H L+ KV  + R        F     G+  +    P  LP ++K
Sbjct:    20 LPPGFRFHPTDEEIITHYLKEKV-FNIR--------FTAAAIGQADLNKNEPWDLPKIAK 70

Query:   131 DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIG-GKVKGYKKIL 188
              G    +FF +  + Y TG R  R   +        W  TGK + +F G G + G KK L
Sbjct:    71 MGEKEFYFFCQRDRKYPTGMRTNRATVSGY------WKATGKDKEIFRGKGCLVGMKKTL 124

Query:   189 VLYTNYGKQKKPEKTNWVMHQYHLGGN-------EEEKDGELVVSKVFYQTQPRQCGNSV 241
             V YT  G+  K EKTNWVMH+Y L G        +  +D E VV +VF++  P     + 
Sbjct:   125 VFYT--GRAPKGEKTNWVMHEYRLDGKYSYHNLPKTARD-EWVVCRVFHKNAPSTTITTT 181

Query:   242 IKDSSSLPPKFNINK--GQSGLDGLKNNPGVVDYYNPPFIAFDQGGGQNRASPPQALIPP 299
              K  S +    NI+     S L  L + PG +    P F     G  Q     P  L  P
Sbjct:   182 -KQLSRIDSLDNIDHLLDFSSLPPLID-PGFLGQPGPSF----SGARQQHDLKP-VLHHP 234

Query:   300 HFAAHDTSFIP 310
               A  D +++P
Sbjct:   235 TTAPVDNTYLP 245

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 70/201 (34%), Positives = 87/201 (43%)

Query:    72 LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
             LP G +F PTD+EL+ H L+ KV             F  T  GE  +    P  LP  +K
Sbjct:    20 LPPGFRFHPTDEELITHYLKPKV---------FNTFFSATAIGEVDLNKIEPWDLPWKAK 70

Query:   131 DGLIR-HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 189
              G    +FF    + Y TG R  R     E G    W  TGK + +F G  + G KK LV
Sbjct:    71 MGEKEWYFFCVRDRKYPTGLRTNRAT---EAG---YWKATGKDKEIFKGKSLVGMKKTLV 124

Query:   190 LYTNYGKQKKPEKTNWVMHQYHLGGN------EEEKDGELVVSKVFYQTQPRQCGNSVIK 243
              Y   G+  K  KTNWVMH+Y L G        +    E V+ +VF   Q R  G  V  
Sbjct:   125 FYK--GRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVF---QKRADGTKV-- 177

Query:   244 DSSSLPPKFNINKGQSGLDGL 264
               S L P  N     +GL  L
Sbjct:   178 PMSMLDPHIN-RMEPAGLPSL 197

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC154 NAC domain protein, IPR003441 (299 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	9e-42

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  140 bits (356), Expect = 9e-42
 Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 20/146 (13%)

Query: 72  LPAGVKFDPTDQELL-EHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
           LP G +F PTD+EL+  +L+ KV          + + IP +     I    P  LP    
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLG----KPLPLLDVIPEV----DIYKFEPWDLPDGKA 52

Query: 131 DGLIR--HFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFI-GGKVKGYKKI 187
            G  R  +FF    + Y  G+R  R        G   W  TGK +PV   GG+V G KK 
Sbjct: 53  KGGDREWYFFSPRDRKYPNGSRTNRAT------GSGYWKATGKDKPVLSKGGEVVGMKKT 106

Query: 188 LVLYTNYGKQKKPEKTNWVMHQYHLG 213
           LV Y   G+  K EKT+WVMH+Y L 
Sbjct: 107 LVFYK--GRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5.7e-37  Score=256.94  Aligned_cols=125  Identities=41%  Similarity=0.703  Sum_probs=87.9

Q ss_pred             CCCceeeCCChHHHHH-HHHHHHhcCcCCCCCccc-ccccccccccCccCCCCCCCCCc-ccCCceEEEEecCCCCCCCC
Q 021635           72 LPAGVKFDPTDQELLE-HLEAKVRADARKLHPLID-EFIPTLEGENGICYTHPEKLPGV-SKDGLIRHFFHRPSKAYTTG  148 (310)
Q Consensus        72 LPpGfRF~PTDeELI~-yL~~Kv~g~~~~~~Plid-~fIp~id~e~DVy~~~PweLPg~-~~dG~~~yFF~~~~kky~~G  148 (310)
                      |||||||+|||+|||. ||.+|+.+..     ++. .+|++    +|||.+|||+||+. ...++.||||+++.+++.+|
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~-----~~~~~~i~~----~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~   71 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEP-----LPCEDVIHD----VDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNG   71 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-H-----HCS-CHSEE------GGGS-GGGCHHHSSS-SSEEEEEEE--------
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCC-----CCcccceee----cccCccChHHhhhhccCCCceEEEEEecccccCCc
Confidence            8999999999999996 6999999964     222 55654    57999999999943 23456788899888888899


Q ss_pred             CcccccccccCCCCccEEeecCCCeeEee-CCEEEEEEEEEEEEeecCCCCCCCcccEEEEEEeeC
Q 021635          149 TRKRRKVHTDEQGGETRWHKTGKTRPVFI-GGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLG  213 (310)
Q Consensus       149 ~RkrR~~~~~~~gG~G~Wk~tGk~k~I~~-~G~vvG~KK~LvFY~~~G~~~~g~KT~WvMhEY~L~  213 (310)
                      .|++|++      ++|+||.+|+.++|.. +|.++|+||+|+||.  ++.+++.+|+|+||||+|.
T Consensus        72 ~r~~R~~------~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~--~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   72 GRPNRVT------GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYS--GKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             --S-EEE------TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEE--SSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccc------cceEEeecccccccccccceeeeeEEEEEEEe--ccCCCCCcCCeEEEEEEeC
Confidence            9999976      4699999999999999 999999999999997  7778899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	310
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-08
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-08

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 72  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 131
           LP G +F PTD EL+EH   +  A  R   P+I         E  +    P  LP  +  
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPII--------AEVDLYKFDPWDLPERALF 66
Query: 132 GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 190
           G    +F  P  + Y  G+R  R        G   W  TG  +PV   G+  G KK LV 
Sbjct: 67  GAREWYFFTPRDRKYPNGSRPNR------AAGNGYWKATGADKPVAPRGRTLGIKKALVF 120
Query: 191 YTNYGKQKKPEKTNWVMHQYHL 212
           Y   GK  +  KT+W+MH+Y L
Sbjct: 121 YA--GKAPRGVKTDWIMHEYRL 140

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 72  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 131
           LP G +F PTD+EL+     +  A          +F   L  E  +    P  LP  +  
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGY--------DFSLQLIAEIDLYKFDPWVLPNKALF 71
Query: 132 GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 190
           G    +F  P  + Y  G+R  R        G   W  TG  + +   G+  G KK LV 
Sbjct: 72  GEKEWYFFSPRDRKYPNGSRPNR------VAGSGYWKATGTDKIISTEGQRVGIKKALVF 125
Query: 191 YTNYGKQKKPEKTNWVMHQYHL 212
           Y   GK  K  KTNW+MH+Y L
Sbjct: 126 YI--GKAPKGTKTNWIMHEYRL 145

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 72  LPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 131
           LP G +F PTD+EL+     +  A          +F   L  E  +    P  LP  +  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGY--------DFSLQLIAEIDLYKFDPWVLPNKALF 68
Query: 132 GLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVL 190
           G    +F  P  + Y  G+R  R        G   W  TG  + +   G+  G KK LV 
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNR------VAGSGYWKATGTDKIISTEGQRVGIKKALVF 122
Query: 191 YTNYGKQKKPEKTNWVMHQYHL 212
           Y   GK  K  KTNW+MH+Y L
Sbjct: 123 YI--GKAPKGTKTNWIMHEYRL 142

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	310
1ut7_A	171	No apical meristem protein; transcription regulati	5e-26
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-25

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  100 bits (251), Expect = 5e-26
 Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 23/171 (13%)

Query: 72  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
           LP G +F PTD+EL+   L  K           +   I  ++    +    P  LP  + 
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKA--AGYDFSLQL---IAEID----LYKFDPWVLPNKAL 67

Query: 131 DG-LIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 189
            G    +FF    + Y  G+R  R       G    W  TG  + +   G+  G KK LV
Sbjct: 68  FGEKEWYFFSPRDRKYPNGSRPNR---VAGSG---YWKATGTDKIISTEGQRVGIKKALV 121

Query: 190 LYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG----ELVVSKVFYQTQPRQ 236
            Y   GK  K  KTNW+MH+Y L             + V+ +++ +    Q
Sbjct: 122 FYI--GKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 98.6 bits (246), Expect = 3e-25
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 28/169 (16%)

Query: 72  LPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSK 130
           LP G +F PTD EL+EH L  K          L    I  ++    +    P  LP  + 
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAG-----QRLPVPIIAEVD----LYKFDPWDLPERAL 65

Query: 131 -DGLIRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILV 189
                 +FF    + Y  G+R  R       G    W  TG  +PV   G+  G KK LV
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNR---AAGNG---YWKATGADKPVAPRGRTLGIKKALV 119

Query: 190 LYTNYGKQKKPEKTNWVMHQYHLGGNEEEKDG---------ELVVSKVF 229
            Y   GK  +  KT+W+MH+Y L        G         + V+ +++
Sbjct: 120 FYA--GKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLY 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
1ut7_A	171	No apical meristem protein; transcription regulati	100.0
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=4.2e-48  Score=340.94  Aligned_cols=152  Identities=30%  Similarity=0.493  Sum_probs=123.1

Q ss_pred             ccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCccCCCCCCCCCcccCCc-eEEEEecCCC
Q 021635           66 IHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGL-IRHFFHRPSK  143 (310)
Q Consensus        66 ~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Plid~fIp~id~e~DVy~~~PweLPg~~~dG~-~~yFF~~~~k  143 (310)
                      ...+.+|||||||+|||||||.| |++|+.+.     |++..+|+++    |||.+|||+||+.+..|+ .||||+++.+
T Consensus        11 ~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~-----~~~~~~I~e~----Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~   81 (171)
T 1ut7_A           11 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGY-----DFSLQLIAEI----DLYKFDPWVLPNKALFGEKEWYFFSPRDR   81 (171)
T ss_dssp             -CCSSCCCTTEEECCCHHHHHHHTHHHHHTTC-----CCSSCCSEEC----CGGGSCGGGHHHHSSSCSSEEEEEEECCC
T ss_pred             cccccCCCCcceeCCChHHHHHHHHHHHhcCC-----CCCCCeEeec----ccccCChhHhhchhhcCCccEEEEecccc
Confidence            45678999999999999999985 99999884     4556788755    699999999999886654 5778888889


Q ss_pred             CCCCCCcccccccccCCCCccEEeecCCCeeEeeCCEEEEEEEEEEEEeecCCCCCCCcccEEEEEEeeCCCCC----CC
Q 021635          144 AYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEE----EK  219 (310)
Q Consensus       144 ky~~G~RkrR~~~~~~~gG~G~Wk~tGk~k~I~~~G~vvG~KK~LvFY~~~G~~~~g~KT~WvMhEY~L~~~~~----~k  219 (310)
                      +|++|.|++|++      ++|+||+||++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|.....    ..
T Consensus        82 k~~~g~R~~R~t------~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~l~~~~~~~~~~~  153 (171)
T 1ut7_A           82 KYPNGSRPNRVA------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRLIEPSRRNGSTK  153 (171)
T ss_dssp             -------CCEEE------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEECCCC-------
T ss_pred             ccCCCCcccccC------CCCEEeccCCCceEEecCcEEEEEEEEEEEc--CcCCCCCcCCeEEEEEEcCCCccccCccc
Confidence            999999999997      4699999999999999999999999999999  88899999999999999988752    24


Q ss_pred             CCCEEEEEEEeeCCC
Q 021635          220 DGELVVSKVFYQTQP  234 (310)
Q Consensus       220 ~~e~VLCKIf~k~~~  234 (310)
                      .++|||||||+|...
T Consensus       154 ~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A          154 LDDWVLCRIYKKQSS  168 (171)
T ss_dssp             -CCEEEEEEEECC--
T ss_pred             CCCEEEEEEEEcCCC
Confidence            589999999999764

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.1e-47  Score=339.12  Aligned_cols=151  Identities=32%  Similarity=0.569  Sum_probs=125.6

Q ss_pred             ccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCccCCCCCCCCCcccCCc-eEEEEecCCC
Q 021635           66 IHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGL-IRHFFHRPSK  143 (310)
Q Consensus        66 ~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Plid~fIp~id~e~DVy~~~PweLPg~~~dG~-~~yFF~~~~k  143 (310)
                      ++...+|||||||+|||||||.| |++|+.+.     |++..+|+++    |||.+|||+||+.+..|+ .||||+++.+
T Consensus         9 ~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~-----~~~~~~I~ev----Dvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~   79 (174)
T 3ulx_A            9 AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQ-----RLPVPIIAEV----DLYKFDPWDLPERALFGAREWYFFTPRDR   79 (174)
T ss_dssp             CCSTTTCCTTCCCCCCHHHHHHHTHHHHHHTC-----CCSSSCCEEC----CGGGSCGGGSGGGCSSCSSEEEEEEECCC
T ss_pred             cccccCCCCcceeCCCHHHHHHHHHHHHhcCC-----CCCcCeeeec----ccccCCchhhhhhhccCCceEEEEecccc
Confidence            45567999999999999999985 99999984     4555778754    799999999999886655 5778888889


Q ss_pred             CCCCCCcccccccccCCCCccEEeecCCCeeEeeCCEEEEEEEEEEEEeecCCCCCCCcccEEEEEEeeCCCCCC-----
Q 021635          144 AYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEE-----  218 (310)
Q Consensus       144 ky~~G~RkrR~~~~~~~gG~G~Wk~tGk~k~I~~~G~vvG~KK~LvFY~~~G~~~~g~KT~WvMhEY~L~~~~~~-----  218 (310)
                      +|++|.|++|++      +.|+||+||++++|..+|.+||+||+|+||.  |+++++.||+|+||||+|......     
T Consensus        80 ky~~g~R~nR~t------~~G~WkatG~dk~I~~~g~~vG~KktLvFy~--g~~p~g~kT~WvMhEY~L~~~~~~~~~~~  151 (174)
T 3ulx_A           80 KYPNGSRPNRAA------GNGYWKATGADKPVAPRGRTLGIKKALVFYA--GKAPRGVKTDWIMHEYRLADAGRAAAGAK  151 (174)
T ss_dssp             -----CCSCEEE------TTEEEEECSCCEEECCSSSCCEEEEEEEEEE--SSTTSCEEEEEEEEEEEECSCC-------
T ss_pred             ccCCCCCceeec------CCceEccCCCCcEEeeCCcEEEEEEEEEEec--CCCCCCCcCCeEEEEEEeCCCCCcccccc
Confidence            999999999997      4699999999999999999999999999999  889999999999999999886431     


Q ss_pred             ----CCCCEEEEEEEeeCC
Q 021635          219 ----KDGELVVSKVFYQTQ  233 (310)
Q Consensus       219 ----k~~e~VLCKIf~k~~  233 (310)
                          ..++|||||||+|..
T Consensus       152 ~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          152 KGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ----CCSSEEEEEEEESCC
T ss_pred             cCCCCCCCEEEEEEEEcCC
Confidence                247899999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	310
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-42

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  142 bits (358), Expect = 2e-42
 Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 22/182 (12%)

Query: 55  GHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEHLEAKVRADARKLHPLIDEFIPTLEGE 114
           G  +   E   +  L  LP G +F PTD+EL+     +  A     +    + I     E
Sbjct: 1   GSHMGIQETDPLTQL-SLPPGFRFYPTDEELMVQYLCRKAAG----YDFSLQLIA----E 51

Query: 115 NGICYTHPEKLPGVSKDGLIRHFFHRP-SKAYTTGTRKRRKVHTDEQGGETRWHKTGKTR 173
             +    P  LP  +  G    +F  P  + Y  G+R  R            W  TG  +
Sbjct: 52  IDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAG------SGYWKATGTDK 105

Query: 174 PVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHLGGNEEE----KDGELVVSKVF 229
            +   G+  G KK LV Y   GK  K  KTNW+MH+Y L          K  + V+ +++
Sbjct: 106 IISTEGQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY 163

Query: 230 YQ 231
            +
Sbjct: 164 KK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	310
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.9e-46  Score=321.93  Aligned_cols=160  Identities=31%  Similarity=0.524  Sum_probs=124.7

Q ss_pred             CCcccccchhcccCCCCCCCceeeCCChHHHHHH-HHHHHhcCcCCCCCcccccccccccccCccCCCCCCCCCcccCCc
Q 021635           55 GHQIKCNEQARIHDLPGLPAGVKFDPTDQELLEH-LEAKVRADARKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGL  133 (310)
Q Consensus        55 ~~~~~~~~~~~~~~~~~LPpGfRF~PTDeELI~y-L~~Kv~g~~~~~~Plid~fIp~id~e~DVy~~~PweLPg~~~dG~  133 (310)
                      +|++..+.++.+.++ +|||||||+|||||||.| |.+|+.+     .|++..+|+++    |||..|||+||+....++
T Consensus         1 ~~~~~~~~~~~~~~l-~LPpG~RF~PTDeELv~~YL~~Ki~g-----~~l~~~~I~~~----Dvy~~~Pw~Lp~~~~~~~   70 (166)
T d1ut7a_           1 GSHMGIQETDPLTQL-SLPPGFRFYPTDEELMVQYLCRKAAG-----YDFSLQLIAEI----DLYKFDPWVLPNKALFGE   70 (166)
T ss_dssp             CCCCCCC----CCSS-CCCTTEEECCCHHHHHHHTHHHHHTT-----CCCSSCCSEEC----CGGGSCGGGHHHHSSSCS
T ss_pred             CCcccccccCccccc-cCCCccccCCCcHHHHHHHHHHHHcC-----CCCCcccceec----cCCcCChhhccchhccCc
Confidence            467777666555444 899999999999999985 9999987     35667788865    699999999998775444


Q ss_pred             -eEEEEecCCCCCCCCCcccccccccCCCCccEEeecCCCeeEeeCCEEEEEEEEEEEEeecCCCCCCCcccEEEEEEee
Q 021635          134 -IRHFFHRPSKAYTTGTRKRRKVHTDEQGGETRWHKTGKTRPVFIGGKVKGYKKILVLYTNYGKQKKPEKTNWVMHQYHL  212 (310)
Q Consensus       134 -~~yFF~~~~kky~~G~RkrR~~~~~~~gG~G~Wk~tGk~k~I~~~G~vvG~KK~LvFY~~~G~~~~g~KT~WvMhEY~L  212 (310)
                       .||||+.+.+++++|.|.+|++      |+|+||.+|+.++|.++|.+||+||+|+||.  ++++++.+|+|+||||+|
T Consensus        71 ~~wyFft~~~~k~~~g~r~~R~~------g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~--~~~~~~~~t~W~M~EY~l  142 (166)
T d1ut7a_          71 KEWYFFSPRDRKYPNGSRPNRVA------GSGYWKATGTDKIISTEGQRVGIKKALVFYI--GKAPKGTKTNWIMHEYRL  142 (166)
T ss_dssp             SEEEEEEECCC-------CCEEE------TTEEEEEEEEEEEEEETTEEEEEEEEEEEEE--SSTTSCEEEEEEEEEEEE
T ss_pred             ceEEEEeeeccccCCCCcccccc------CCCEecccCCCceEecCCcEEEEEEEEEEEe--cCCCCCCccCeEEEEEec
Confidence             5778888788899999999987      4699999999999999999999999999999  888999999999999999


Q ss_pred             CCCCC----CCCCCEEEEEEEeeC
Q 021635          213 GGNEE----EKDGELVVSKVFYQT  232 (310)
Q Consensus       213 ~~~~~----~k~~e~VLCKIf~k~  232 (310)
                      .....    ...++|||||||+|.
T Consensus       143 ~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         143 IEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             CCCC--------CCEEEEEEEECC
T ss_pred             CCcccccCccccCCEEEEEEEecC
Confidence            87653    235689999999874