Citrus Sinensis ID: 021636

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANGHQILLS
ccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHcHHHcccccccccccEEEEcccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEccccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEccccccccEEEEcccEEEEEEccccccccccccccccccEEEEEEEEccccccEEEccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccccc
ccccccEEEHHHcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccEEcccccHcEEEEEEcccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEccccccccccHccccccccccccEEEEEcccccccEEEEEcccEEEcccccccEEEEEcccEEEEEEcccEEEEEEEEEEcccccEEEEEEEEcccccEEEcccHHHcccccccHHHHHHHHHHHcccccccHHHHHHHHHHccccccc
meipipvidfnelegeNRKKTMALLHQACEKWgffqvdnhgiDKKLMEKVKQLVNSHYEEYlkggfydsELVKSLEKENknnirdvdwestffiwhrpssnineiRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIknafsgekgpsvgtkvakypqcpypelvRGLREHTDAGGIILLlqddqvpgleffkdgewvkippsrnntifvntGDQVEVLSNGRYQSALHrvmpekngsrlsiatfynpandaiispaikllypsyysfQDYLKLygttkfsdkvprleSMKEIANGHQILLS
meipipvidfnelegeNRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENknnirdvdwestffiwhrpssnineIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKeianghqills
MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANGHQILLS
******VIDFNEL*****KKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSD********************
*EIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLK**************ENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIA********
MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANGHQILLS
**IPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANG******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTxxxxxxxxxxxxxxxxxxxxxNLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANGHQILLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query310 2.2.26 [Sep-21-2011]
Q9ZUN4310 1-aminocyclopropane-1-car yes no 0.967 0.967 0.719 1e-130
Q41931320 1-aminocyclopropane-1-car no no 0.945 0.915 0.501 7e-90
Q00985314 1-aminocyclopropane-1-car N/A no 0.945 0.933 0.498 4e-89
Q09052320 1-aminocyclopropane-1-car N/A no 0.938 0.909 0.508 5e-89
O48882330 1-aminocyclopropane-1-car N/A no 0.945 0.887 0.511 5e-89
P24157316 1-aminocyclopropane-1-car N/A no 0.945 0.927 0.5 1e-88
P31237319 1-aminocyclopropane-1-car N/A no 0.954 0.927 0.498 2e-88
Q08506319 1-aminocyclopropane-1-car N/A no 0.945 0.918 0.490 3e-88
Q8S932318 1-aminocyclopropane-1-car N/A no 0.941 0.918 0.5 2e-87
P05116315 1-aminocyclopropane-1-car N/A no 0.948 0.933 0.485 3e-87
>sp|Q9ZUN4|ACCO1_ARATH 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Arabidopsis thaliana GN=ACO1 PE=2 SV=1 Back     alignment and function desciption
 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/303 (71%), Positives = 257/303 (84%), Gaps = 3/303 (0%)

Query: 2   EIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEY 61
           E+ IPVIDF EL+GE R KTM+LL  AC+KWGFF VDNHGIDK+LMEKVK+++NSHYEE+
Sbjct: 8   EMEIPVIDFAELDGEKRSKTMSLLDHACDKWGFFMVDNHGIDKELMEKVKKMINSHYEEH 67

Query: 62  LKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIA 121
           LK  FY SE+VK+L   ++    D DWES+FFI H+P+SNI +I N+SE+   TM++Y+ 
Sbjct: 68  LKEKFYQSEMVKAL---SEGKTSDADWESSFFISHKPTSNICQIPNISEELSKTMDEYVC 124

Query: 122 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTD 181
           QL K AE+LS+LMCENLGL++  I NAFSG KGP+ GTKVAKYP+CP PEL+RGLREHTD
Sbjct: 125 QLHKFAERLSKLMCENLGLDQEDIMNAFSGPKGPAFGTKVAKYPECPRPELMRGLREHTD 184

Query: 182 AGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMP 241
           AGGIILLLQDDQVPGLEFFKDG+WV IPPS+NNTIFVNTGDQ+E+LSNGRY+S +HRVM 
Sbjct: 185 AGGIILLLQDDQVPGLEFFKDGKWVPIPPSKNNTIFVNTGDQLEILSNGRYKSVVHRVMT 244

Query: 242 EKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 301
            K+GSRLSIATFYNPA DAIISPA KLLYPS Y FQDYLKLY TTKF DK PRLE+MK++
Sbjct: 245 VKHGSRLSIATFYNPAGDAIISPAPKLLYPSGYRFQDYLKLYSTTKFGDKGPRLETMKKM 304

Query: 302 ANG 304
            N 
Sbjct: 305 GNA 307
Enzyme involved in the ethylene biosynthesis. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very-long-chain fatty acids (VLCFAs C20:0 to C30:0).
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q41931|ACCO2_ARATH 1-aminocyclopropane-1-carboxylate oxidase 2 OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2 Back     alignment and function description
>sp|Q00985|ACCO1_MALDO 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1 Back     alignment and function description
>sp|Q09052|ACCO1_BRAJU 1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|O48882|ACCO2_MALDO 1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1 Back     alignment and function description
>sp|P24157|ACCO4_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1 Back     alignment and function description
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|Q08506|ACCO1_PETHY 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1 Back     alignment and function description
>sp|Q8S932|ACCO_DIOKA 1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
359484312329 PREDICTED: 1-aminocyclopropane-1-carboxy 0.983 0.927 0.758 1e-140
297738683306 unnamed protein product [Vitis vinifera] 0.974 0.986 0.763 1e-139
224091345303 1-aminocyclopropane-1-carboxylate [Popul 0.954 0.976 0.780 1e-137
255546169308 1-aminocyclopropane-1-carboxylate oxidas 0.964 0.970 0.774 1e-136
171452364306 ACC oxidase [Bruguiera gymnorhiza] 0.961 0.973 0.77 1e-134
62526579306 ACC oxidase ACCO2 [Manihot esculenta] 0.974 0.986 0.759 1e-133
147852358295 hypothetical protein VITISV_010647 [Viti 0.945 0.993 0.725 1e-130
356513217307 PREDICTED: 1-aminocyclopropane-1-carboxy 0.974 0.983 0.731 1e-129
255647368307 unknown [Glycine max] 0.974 0.983 0.727 1e-129
356520867306 PREDICTED: 1-aminocyclopropane-1-carboxy 0.970 0.983 0.722 1e-128
>gi|359484312|ref|XP_002279746.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 233/307 (75%), Positives = 268/307 (87%), Gaps = 2/307 (0%)

Query: 2   EIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEY 61
           E+ +P+IDF++L+GE R +T ALLHQACEKWGFFQ+DNHG+DKKLMEKVK LVN+HYEE 
Sbjct: 23  EMEVPMIDFDKLDGEKRAETKALLHQACEKWGFFQIDNHGVDKKLMEKVKHLVNTHYEEI 82

Query: 62  LKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIA 121
           +K  FY+SE+ K+LE  +K    ++DWES+FF+WHRP+SNI+E  N+SED R TM++YIA
Sbjct: 83  MKRSFYESEIAKALE--DKETASNIDWESSFFLWHRPTSNIDEFTNISEDLRKTMDEYIA 140

Query: 122 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTD 181
           QL KLAEKLSELMCENLGLEK YI+ AFSG  GPSVGTKVAKYPQCP PELVRGLREHTD
Sbjct: 141 QLFKLAEKLSELMCENLGLEKGYIREAFSGNAGPSVGTKVAKYPQCPRPELVRGLREHTD 200

Query: 182 AGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMP 241
           AGGIILLLQDDQVPGLEF+KDGEWV IPPS+NNTIFVNTGDQ+EVLSNGRY+S LHRVM 
Sbjct: 201 AGGIILLLQDDQVPGLEFYKDGEWVVIPPSKNNTIFVNTGDQIEVLSNGRYKSTLHRVMA 260

Query: 242 EKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 301
           +KNGSRLSIATFYNP+ DAIISPA KLLYP ++ FQDYLKLY TTKF+DK PR ESMK +
Sbjct: 261 DKNGSRLSIATFYNPSGDAIISPAPKLLYPDHFRFQDYLKLYATTKFADKGPRFESMKNM 320

Query: 302 ANGHQIL 308
           A GH  L
Sbjct: 321 AIGHHSL 327

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297738683|emb|CBI27928.3| unnamed protein product [Vitis vinifera] gi|408451524|gb|AFU66006.1| 1-aminocyclopropane-1-carboxylic acid oxidase 3 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224091345|ref|XP_002309227.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222855203|gb|EEE92750.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255546169|ref|XP_002514144.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223546600|gb|EEF48098.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|171452364|dbj|BAG15873.1| ACC oxidase [Bruguiera gymnorhiza] Back     alignment and taxonomy information
>gi|62526579|gb|AAX84675.1| ACC oxidase ACCO2 [Manihot esculenta] Back     alignment and taxonomy information
>gi|147852358|emb|CAN80122.1| hypothetical protein VITISV_010647 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356513217|ref|XP_003525310.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|255647368|gb|ACU24150.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356520867|ref|XP_003529081.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
TAIR|locus:2050364310 ACO1 "ACC oxidase 1" [Arabidop 0.964 0.964 0.728 6e-119
TAIR|locus:2027099320 ACO2 "ACC oxidase 2" [Arabidop 0.935 0.906 0.506 2.1e-84
TAIR|locus:2008905320 AT1G12010 [Arabidopsis thalian 0.954 0.925 0.490 1.5e-81
TAIR|locus:2205568323 EFE "ethylene-forming enzyme" 0.938 0.900 0.480 3.8e-78
TAIR|locus:2031422307 AT1G77330 [Arabidopsis thalian 0.932 0.941 0.469 1.3e-66
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.887 0.779 0.360 9.6e-41
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.932 0.830 0.346 6.8e-40
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.883 0.754 0.329 7.8e-39
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.883 0.785 0.355 9.9e-39
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.925 0.773 0.327 1.6e-38
TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
 Identities = 220/302 (72%), Positives = 258/302 (85%)

Query:     2 EIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEY 61
             E+ IPVIDF EL+GE R KTM+LL  AC+KWGFF VDNHGIDK+LMEKVK+++NSHYEE+
Sbjct:     8 EMEIPVIDFAELDGEKRSKTMSLLDHACDKWGFFMVDNHGIDKELMEKVKKMINSHYEEH 67

Query:    62 LKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIA 121
             LK  FY SE+VK+L  E K +  D DWES+FFI H+P+SNI +I N+SE+   TM++Y+ 
Sbjct:    68 LKEKFYQSEMVKALS-EGKTS--DADWESSFFISHKPTSNICQIPNISEELSKTMDEYVC 124

Query:   122 QLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTD 181
             QL K AE+LS+LMCENLGL++  I NAFSG KGP+ GTKVAKYP+CP PEL+RGLREHTD
Sbjct:   125 QLHKFAERLSKLMCENLGLDQEDIMNAFSGPKGPAFGTKVAKYPECPRPELMRGLREHTD 184

Query:   182 AGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMP 241
             AGGIILLLQDDQVPGLEFFKDG+WV IPPS+NNTIFVNTGDQ+E+LSNGRY+S +HRVM 
Sbjct:   185 AGGIILLLQDDQVPGLEFFKDGKWVPIPPSKNNTIFVNTGDQLEILSNGRYKSVVHRVMT 244

Query:   242 EKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI 301
              K+GSRLSIATFYNPA DAIISPA KLLYPS Y FQDYLKLY TTKF DK PRLE+MK++
Sbjct:   245 VKHGSRLSIATFYNPAGDAIISPAPKLLYPSGYRFQDYLKLYSTTKFGDKGPRLETMKKM 304

Query:   302 AN 303
              N
Sbjct:   305 GN 306
GO:0005737 "cytoplasm" evidence=ISM
GO:0009693 "ethylene biosynthetic process" evidence=NAS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0051365 "cellular response to potassium ion starvation" evidence=IEP
GO:0071398 "cellular response to fatty acid" evidence=IEP
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0071732 "cellular response to nitric oxide" evidence=IEP
GO:0010089 "xylem development" evidence=RCA
GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P31239ACCO_PEA1, ., 1, 4, ., 1, 7, ., 40.50490.93540.9148N/Ano
Q9ZUN4ACCO1_ARATH1, ., 1, 4, ., 1, 7, ., 40.71940.96770.9677yesno
Q09052ACCO1_BRAJU1, ., 1, 4, ., 1, 7, ., 40.50810.93870.9093N/Ano
O48882ACCO2_MALDO1, ., 1, 4, ., 1, 7, ., 40.51150.94510.8878N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.4LOW CONFIDENCE prediction!
3rd Layer1.14.170.921
4th Layer1.14.17.40.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016583001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (306 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00026899001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (474 aa)
     •  0.899
GSVIVG00016601001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (445 aa)
     •  0.899
ACS1
SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_1179, whole ge [...] (469 aa)
     •  0.899
GSVIVG00013474001
SubName- Full=Chromosome undetermined scaffold_485, whole genome shotgun sequence; Flags- Fragm [...] (222 aa)
  •     0.506
GSVIVG00008183001
SubName- Full=Chromosome undetermined scaffold_1274, whole genome shotgun sequence; (163 aa)
  •     0.455

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 0.0
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-131
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-68
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-56
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-49
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-48
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 9e-45
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-43
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-43
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-43
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-40
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 8e-40
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-39
PLN02947374 PLN02947, PLN02947, oxidoreductase 4e-39
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-37
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-36
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 7e-36
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-34
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-31
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 9e-30
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-28
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-26
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-24
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-23
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-22
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-19
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 9e-14
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 7e-06
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information 
 Score =  561 bits (1448), Expect = 0.0
 Identities = 248/305 (81%), Positives = 271/305 (88%), Gaps = 4/305 (1%)

Query: 1   MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEE 60
           MEIP  VIDF++L+GE R KTM+LLHQACEKWGFFQV+NHGIDKKLMEKVKQLVNSHYEE
Sbjct: 1   MEIP--VIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEE 58

Query: 61  YLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYI 120
            LK  FY+SE+ K+L+  N+    DVDWES+FFIWHRP+SNINEI NLSED R TM++YI
Sbjct: 59  NLKESFYESEIAKALD--NEGKTSDVDWESSFFIWHRPTSNINEIPNLSEDLRKTMDEYI 116

Query: 121 AQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHT 180
           AQLIKLAEKLSELM ENLGL+K YIK AFSG KGPSVGTKVAKYP+CP PELVRGLREHT
Sbjct: 117 AQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVAKYPECPRPELVRGLREHT 176

Query: 181 DAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVM 240
           DAGGIILLLQDDQVPGLEF KDG+WV IPPS+NNTIFVNTGDQ+EVLSNGRY+S LHRVM
Sbjct: 177 DAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVM 236

Query: 241 PEKNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKE 300
            +KNGSRLSIATFYNPA DAIISPA KLLYPS Y FQDYLKLY TTKF DK PR ESMK+
Sbjct: 237 ADKNGSRLSIATFYNPAGDAIISPAPKLLYPSNYRFQDYLKLYSTTKFGDKGPRFESMKK 296

Query: 301 IANGH 305
           +ANGH
Sbjct: 297 MANGH 301

Length = 303
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 310
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02904357 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.87
PLN03176120 flavanone-3-hydroxylase; Provisional 99.74
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.1
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.4
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.98
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.11
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-75  Score=528.73  Aligned_cols=302  Identities=81%  Similarity=1.302  Sum_probs=262.3

Q ss_pred             CCCceeeCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhccCccccccccccccCcccCCcCC
Q 021636            3 IPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNN   82 (310)
Q Consensus         3 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~g~~~   82 (310)
                      ++||+|||+.+....+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+......+++...+  .
T Consensus         1 ~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~~~~~~~~~~~~~--~   78 (303)
T PLN02403          1 MEIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFYESEIAKALDNEG--K   78 (303)
T ss_pred             CCCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhhcccccCcccccC--C
Confidence            47999999998655677889999999999999999999999999999999999999999999863222222332211  2


Q ss_pred             CCCCCcccccccccCCCCCcccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhcCCCCCceeeeee
Q 021636           83 IRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVA  162 (310)
Q Consensus        83 ~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~  162 (310)
                      .+..||+|.|.+...|..+.|.||+.+++||+.+++|+++|.+++..|+++|+++||+++++|.+.+.....+.+.+|++
T Consensus        79 ~~~~d~kE~~~~~~~p~~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  158 (303)
T PLN02403         79 TSDVDWESSFFIWHRPTSNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKEAFSGNKGPSVGTKVA  158 (303)
T ss_pred             CCCccHhhhcccccCCccchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCccceeeeE
Confidence            33568999998766666567889988899999999999999999999999999999999999988776432334569999


Q ss_pred             ccCCCCCccccCCccCccCCCceeEEEecCCCCceeEeeCCeeEEcCCCCCCeEEEEccchhhhhccCccccccccccCC
Q 021636          163 KYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPE  242 (310)
Q Consensus       163 ~Yp~~~~~~~~~g~~~HtD~~~lTll~~~~~~~GLqv~~~g~W~~v~~~~~~~~vVniGd~l~~~TnG~~~s~~HRV~~~  242 (310)
                      |||+++.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.||+++|||+||+||+||||+|+|++|||+.+
T Consensus       159 ~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~~HRVv~~  238 (303)
T PLN02403        159 KYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLKDGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKSTLHRVMAD  238 (303)
T ss_pred             cCCCCCCcccccCccCccCCCeEEEEEecCCCCceEeccCCeEEECCCCCCCEEEEEehHHHHHHhCCeeecccceeecC
Confidence            99999877777899999999999999997459999999999999999998459999999999999999999999999988


Q ss_pred             CCCCceeeEEEeCCCCCceEecCCCCCCCCcccHHHHHHHHhccCCCCcccchhhchhhhcccc
Q 021636          243 KNGSRLSIATFYNPANDAIISPAIKLLYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIANGHQ  306 (310)
Q Consensus       243 ~~~~R~S~~~F~~P~~d~~i~p~~~~~y~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (310)
                      .+++|||++||++|+.|++|+|+++++|+++++|+||++.+.+.+...+...+++++++||+|-
T Consensus       239 ~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~eyl~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (303)
T PLN02403        239 KNGSRLSIATFYNPAGDAIISPAPKLLYPSNYRFQDYLKLYSTTKFGDKGPRFESMKKMANGHS  302 (303)
T ss_pred             CCCCEEEEEEEEcCCCCCeEeCchhhCCCCCccHHHHHHHHHHhccccccchHHHhhhhhccCC
Confidence            8888999999999999999999999999844999999999887666666666999999999994

>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-83
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-28
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-28
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-27
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-08
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-06
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-06
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 146/305 (47%), Positives = 206/305 (67%), Gaps = 13/305 (4%)
Query: 5   IPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKG 64
            P+I  +++ G  R  T   +  ACE WGFF++ NHGI +++ + V++    HY++  + 
Sbjct: 4   FPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCXEQ 63
Query: 65  GFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLI 124
            F +    K+LE   +  + D DWESTFF+ H P SNI+E+ +L E++R    D+  +L 
Sbjct: 64  RFKELVASKALEG-VQAEVTDXDWESTFFLKHLPISNISEVPDLDEEYREVXRDFAKRLE 122
Query: 125 KLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGG 184
           KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HTDAGG
Sbjct: 123 KLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGG 182
Query: 185 IILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKN 244
           IILL QDD+V GL+  KDG+W+ +PP R ++I VN GDQ+EV++NG+Y+S  HRV+ +K+
Sbjct: 183 IILLFQDDKVSGLQLLKDGQWIDVPPXR-HSIVVNLGDQLEVITNGKYKSVXHRVIAQKD 241
Query: 245 GSRLSIATFYNPANDAIISPAIKL----------LYPSYYSFQDYLKLYGTTKFSDKVPR 294
           G+R S+A+FYNP +DA+I PA  L          +YP +  F DY KLY   KF  K PR
Sbjct: 242 GARXSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFV-FDDYXKLYAGLKFQAKEPR 300
Query: 295 LESMK 299
            E+ K
Sbjct: 301 FEAXK 305
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-131
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-107
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-63
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-61
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-59
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-54
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  375 bits (966), Expect = e-131
 Identities = 152/317 (47%), Positives = 222/317 (70%), Gaps = 14/317 (4%)

Query: 1   MEIPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEE 60
           ME   P+I  +++ G  R  TM ++  ACE WGFF++ NHGI +++M+ V+++   HY++
Sbjct: 1   ME-NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKK 59

Query: 61  YLKGGFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYI 120
            ++  F +    K+LE   +  + D+DWESTFF+ H P SNI+E+ +L E++R  M D+ 
Sbjct: 60  CMEQRFKELVASKALEG-VQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFA 118

Query: 121 AQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHT 180
            +L KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HT
Sbjct: 119 KRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHT 178

Query: 181 DAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVM 240
           DAGGIILL QDD+V GL+  KDG+W+ +PP R ++I VN GDQ+EV++NG+Y+S +HRV+
Sbjct: 179 DAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVI 237

Query: 241 PEKNGSRLSIATFYNPANDAIISPAIKL----------LYPSYYSFQDYLKLYGTTKFSD 290
            +K+G+R+S+A+FYNP +DA+I PA  L          +YP  + F DY+KLY   KF  
Sbjct: 238 AQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPK-FVFDDYMKLYAGLKFQA 296

Query: 291 KVPRLESMKEIANGHQI 307
           K PR E+MK +    ++
Sbjct: 297 KEPRFEAMKAMETDVKM 313
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.06
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 87.83
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 87.46
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 82.49
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 81.3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=2e-77  Score=546.43  Aligned_cols=298  Identities=50%  Similarity=0.993  Sum_probs=268.6

Q ss_pred             CCCceeeCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhccCccccccccccccCcccCCcCC
Q 021636            3 IPIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNN   82 (310)
Q Consensus         3 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~g~~~   82 (310)
                      .+||||||+.+.++++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|++.....+||.+++. +
T Consensus         2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~-e   80 (319)
T 1w9y_A            2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQA-E   80 (319)
T ss_dssp             CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-C
T ss_pred             CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCcccc-c
Confidence            469999999986556888999999999999999999999999999999999999999999999886544568887643 3


Q ss_pred             CCCCCcccccccccCCCCCcccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhcCCCCCceeeeee
Q 021636           83 IRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVA  162 (310)
Q Consensus        83 ~~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~  162 (310)
                      .+..||+|.|++...|....|.||+.++.|++.+++|+++|.+++.+|+++|+++||+++++|.+.+...+++.+.+|++
T Consensus        81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~  160 (319)
T 1w9y_A           81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS  160 (319)
T ss_dssp             GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred             CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence            46679999998876666667899998999999999999999999999999999999999999999887433356789999


Q ss_pred             ccCCCCCccccCCccCccCCCceeEEEecCCCCceeEeeCCeeEEcCCCCCCeEEEEccchhhhhccCccccccccccCC
Q 021636          163 KYPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPE  242 (310)
Q Consensus       163 ~Yp~~~~~~~~~g~~~HtD~~~lTll~~~~~~~GLqv~~~g~W~~v~~~~~~~~vVniGd~l~~~TnG~~~s~~HRV~~~  242 (310)
                      |||||+.++...|+++|||+|+||||+||+.++||||+++|+|++|+|.| |++|||+||+||+||||+|||+.|||+.+
T Consensus       161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~p-galvVNiGD~l~~~SnG~~kS~~HRVv~~  239 (319)
T 1w9y_A          161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQ  239 (319)
T ss_dssp             ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCT-TCEEEEECHHHHHHTTTSSCCCCEEECCC
T ss_pred             ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCC-CcEEEEhHHHHHHHhCCeeecccceecCC
Confidence            99999988888999999999999999996469999999999999999999 99999999999999999999999999998


Q ss_pred             CCCCceeeEEEeCCCCCceEecCCCC----------CCCCcccHHHHHHHHhccCCCCcccchhhchhhhc
Q 021636          243 KNGSRLSIATFYNPANDAIISPAIKL----------LYPSYYSFQDYLKLYGTTKFSDKVPRLESMKEIAN  303 (310)
Q Consensus       243 ~~~~R~S~~~F~~P~~d~~i~p~~~~----------~y~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  303 (310)
                      ++.+|||++||++|+.|++|.|++++          .|++ ++|+||++.++++++.+|..+|+.+|++++
T Consensus       240 ~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~-~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~  309 (319)
T 1w9y_A          240 KDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPK-FVFDDYMKLYAGLKFQAKEPRFEAMKAMET  309 (319)
T ss_dssp             SSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCC-EEHHHHHHTTTTTTCSSHHHHHHHHHHC--
T ss_pred             CCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCc-EeHHHHHHHHHhhhcCcchhHHHHHHHHhh
Confidence            88899999999999999999998654          3888 999999999999999888777999999866
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 310
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-74
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-49
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-47
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-40
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  227 bits (580), Expect = 5e-74
 Identities = 149/305 (48%), Positives = 217/305 (71%), Gaps = 13/305 (4%)

Query: 5   IPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKG 64
            P+I  +++ G  R  TM ++  ACE WGFF++ NHGI +++M+ V+++   HY++ ++ 
Sbjct: 3   FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 62

Query: 65  GFYDSELVKSLEKENKNNIRDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLI 124
            F +    K+LE   +  + D+DWESTFF+ H P SNI+E+ +L E++R  M D+  +L 
Sbjct: 63  RFKELVASKALEG-VQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLE 121

Query: 125 KLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAKYPQCPYPELVRGLREHTDAGG 184
           KLAE+L +L+CENLGLEK Y+KNAF G KGP+ GTKV+ YP CP P+L++GLR HTDAGG
Sbjct: 122 KLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGG 181

Query: 185 IILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEKN 244
           IILL QDD+V GL+  KDG+W+ +PP R++ + VN GDQ+EV++NG+Y+S +HRV+ +K+
Sbjct: 182 IILLFQDDKVSGLQLLKDGQWIDVPPMRHSIV-VNLGDQLEVITNGKYKSVMHRVIAQKD 240

Query: 245 GSRLSIATFYNPANDAIISPAIKL----------LYPSYYSFQDYLKLYGTTKFSDKVPR 294
           G+R+S+A+FYNP +DA+I PA  L          +YP  + F DY+KLY   KF  K PR
Sbjct: 241 GARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPK-FVFDDYMKLYAGLKFQAKEPR 299

Query: 295 LESMK 299
            E+MK
Sbjct: 300 FEAMK 304
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.62
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=4.8e-76  Score=534.47  Aligned_cols=295  Identities=51%  Similarity=1.005  Sum_probs=269.9

Q ss_pred             CCceeeCCCCCcccHHHHHHHHHHHHHhccEEEEEcCCCCHHHHHHHHHHHHHHhccCccccccccccccCcccCCcCCC
Q 021636            4 PIPVIDFNELEGENRKKTMALLHQACEKWGFFQVDNHGIDKKLMEKVKQLVNSHYEEYLKGGFYDSELVKSLEKENKNNI   83 (310)
Q Consensus         4 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~g~~~~   83 (310)
                      +||||||+.+++.++++++++|.+||+++|||||+||||+.++++++++.+++||++|.|+|++......+|.+++. ..
T Consensus         2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~-~~   80 (307)
T d1w9ya1           2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQA-EV   80 (307)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CG
T ss_pred             CCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCccc-cc
Confidence            79999999998778999999999999999999999999999999999999999999999999876555555555532 23


Q ss_pred             CCCCcccccccccCCCCCcccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHhhcCCCCCceeeeeec
Q 021636           84 RDVDWESTFFIWHRPSSNINEIRNLSEDFRNTMEDYIAQLIKLAEKLSELMCENLGLEKSYIKNAFSGEKGPSVGTKVAK  163 (310)
Q Consensus        84 ~~~d~~e~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr~~~  163 (310)
                      ...||+|.|.+...+..+.+.||+.++.|++.+++|+++|.+++.+|+++|+++||+++++|.+.+...+...+.+|++|
T Consensus        81 ~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~  160 (307)
T d1w9ya1          81 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN  160 (307)
T ss_dssp             GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred             cccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceecC
Confidence            45789999988777777778899999999999999999999999999999999999999999988866556678899999


Q ss_pred             cCCCCCccccCCccCccCCCceeEEEecCCCCceeEeeCCeeEEcCCCCCCeEEEEccchhhhhccCccccccccccCCC
Q 021636          164 YPQCPYPELVRGLREHTDAGGIILLLQDDQVPGLEFFKDGEWVKIPPSRNNTIFVNTGDQVEVLSNGRYQSALHRVMPEK  243 (310)
Q Consensus       164 Yp~~~~~~~~~g~~~HtD~~~lTll~~~~~~~GLqv~~~g~W~~v~~~~~~~~vVniGd~l~~~TnG~~~s~~HRV~~~~  243 (310)
                      |||++.++...|+++|||+|+||||+|++.++||||.++|+|++|+|.+ |++|||+||+||+||||+||||.|||+.++
T Consensus       161 YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~-~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~  239 (307)
T d1w9ya1         161 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMR-HSIVVNLGDQLEVITNGKYKSVMHRVIAQK  239 (307)
T ss_dssp             CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCT-TCEEEEECHHHHHHTTTSSCCCCEEECCCS
T ss_pred             CCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCC-CeEEEEcchhhHHhhCCcccCcCceeecCC
Confidence            9999998888999999999999999998678999999999999999999 999999999999999999999999999988


Q ss_pred             CCCceeeEEEeCCCCCceEecCCCCC----------CCCcccHHHHHHHHhccCCCCcccchhhchhh
Q 021636          244 NGSRLSIATFYNPANDAIISPAIKLL----------YPSYYSFQDYLKLYGTTKFSDKVPRLESMKEI  301 (310)
Q Consensus       244 ~~~R~S~~~F~~P~~d~~i~p~~~~~----------y~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  301 (310)
                      +.+|||++||++|+.|++|+|+|+++          |+| +||+||++.+.+++|+.|+++||+||-+
T Consensus       240 ~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~-~t~~ey~~~~~~~~~~~~~~~~~~~~~~  306 (307)
T d1w9ya1         240 DGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPK-FVFDDYMKLYAGLKFQAKEPRFEAMKAM  306 (307)
T ss_dssp             SSCCEEEEEEEECCTTCEECCCGGGC--------CCCCC-EEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred             CCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCC-eeHHHHHHHHHhccCCcccHHHHHhhcc
Confidence            88999999999999999999999875          999 9999999999999999999999999853
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure